Query 039862
Match_columns 173
No_of_seqs 122 out of 1100
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 03:44:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039862.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039862hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ta6_A Triosephosphate isomera 100.0 1E-70 3.5E-75 465.5 17.8 172 1-172 85-259 (267)
2 2v5b_A Triosephosphate isomera 100.0 4E-70 1.4E-74 457.0 15.4 167 1-167 74-242 (244)
3 3qst_A Triosephosphate isomera 100.0 1.3E-69 4.4E-74 456.4 17.0 172 1-172 82-255 (255)
4 4g1k_A Triosephosphate isomera 100.0 2.5E-69 8.4E-74 458.0 17.5 164 1-168 105-271 (272)
5 3th6_A Triosephosphate isomera 100.0 2.8E-69 9.4E-74 453.1 16.9 167 1-167 80-246 (249)
6 3m9y_A Triosephosphate isomera 100.0 3E-69 1E-73 454.0 16.9 168 1-168 83-253 (254)
7 3krs_A Triosephosphate isomera 100.0 3.7E-69 1.3E-73 456.7 17.2 168 1-168 103-270 (271)
8 3kxq_A Triosephosphate isomera 100.0 3.3E-69 1.1E-73 457.6 16.7 167 1-169 105-273 (275)
9 1yya_A Triosephosphate isomera 100.0 9.3E-69 3.2E-73 450.1 18.1 168 1-168 79-249 (250)
10 2yc6_A Triosephosphate isomera 100.0 1.1E-68 3.8E-73 451.1 17.6 171 1-171 81-255 (257)
11 2btm_A TIM, protein (triosepho 100.0 8.3E-69 2.8E-73 450.8 16.4 168 1-168 79-249 (252)
12 2i9e_A Triosephosphate isomera 100.0 1.2E-68 4.3E-73 451.1 17.3 170 1-170 79-249 (259)
13 1aw2_A Triosephosphate isomera 100.0 1.5E-68 5.2E-73 450.1 17.3 171 1-172 82-255 (256)
14 1o5x_A TIM, triosephosphate is 100.0 1.7E-68 5.7E-73 448.1 17.2 167 1-167 80-246 (248)
15 1r2r_A TIM, triosephosphate is 100.0 1.5E-68 5.1E-73 448.4 16.6 166 1-166 80-246 (248)
16 1tre_A Triosephosphate isomera 100.0 1.8E-68 6.1E-73 449.4 17.1 168 1-169 80-250 (255)
17 1m6j_A TIM, TPI, triosephospha 100.0 1.6E-68 5.5E-73 451.1 16.8 170 1-170 87-259 (261)
18 1ney_A TIM, triosephosphate is 100.0 1.2E-68 4.2E-73 448.6 15.5 168 1-168 79-246 (247)
19 1mo0_A TIM, triosephosphate is 100.0 4.8E-68 1.6E-72 450.5 18.1 168 1-168 99-267 (275)
20 2vxn_A Triosephosphate isomera 100.0 3.4E-68 1.2E-72 446.9 16.9 167 1-167 81-249 (251)
21 2j27_A Triosephosphate isomera 100.0 2.8E-68 9.6E-73 447.2 15.8 167 1-167 80-248 (250)
22 1b9b_A TIM, protein (triosepho 100.0 2.4E-68 8.3E-73 448.5 14.0 168 1-168 81-253 (255)
23 2jgq_A Triosephosphate isomera 100.0 5E-65 1.7E-69 423.7 14.3 156 1-167 74-232 (233)
24 3s6d_A Putative triosephosphat 100.0 9.9E-65 3.4E-69 435.5 10.8 169 1-170 133-307 (310)
25 1hg3_A Triosephosphate isomera 100.0 1E-43 3.5E-48 294.1 11.0 139 1-170 81-223 (225)
26 1w0m_A TIM, triosephosphate is 100.0 1.3E-43 4.3E-48 293.8 9.8 139 1-170 78-220 (226)
27 2h6r_A Triosephosphate isomera 100.0 3.1E-32 1E-36 223.1 8.8 137 2-169 76-216 (219)
28 2p10_A MLL9387 protein; putati 99.2 5.8E-11 2E-15 100.8 8.6 129 2-158 115-264 (286)
29 1wv2_A Thiazole moeity, thiazo 98.2 6.7E-06 2.3E-10 69.1 9.2 121 3-158 95-221 (265)
30 3tha_A Tryptophan synthase alp 98.1 7.7E-06 2.6E-10 68.3 7.2 118 2-157 110-231 (252)
31 2htm_A Thiazole biosynthesis p 97.9 1.6E-05 5.3E-10 67.0 6.1 109 16-158 100-212 (268)
32 3nav_A Tryptophan synthase alp 97.9 5.2E-05 1.8E-09 63.7 9.3 118 2-156 119-240 (271)
33 1tqj_A Ribulose-phosphate 3-ep 97.9 0.0001 3.4E-09 59.9 10.2 126 2-158 79-206 (230)
34 3tsm_A IGPS, indole-3-glycerol 97.8 0.00042 1.4E-08 58.2 12.6 117 3-158 137-254 (272)
35 1h1y_A D-ribulose-5-phosphate 97.7 0.00021 7.3E-09 57.5 10.3 122 3-158 82-206 (228)
36 3f4w_A Putative hexulose 6 pho 97.7 0.00042 1.4E-08 54.4 11.7 120 2-158 71-192 (211)
37 3vnd_A TSA, tryptophan synthas 97.7 0.00021 7.2E-09 59.8 10.4 119 2-156 117-238 (267)
38 1vc4_A Indole-3-glycerol phosp 97.7 0.00011 3.9E-09 60.8 8.0 118 3-158 123-241 (254)
39 1geq_A Tryptophan synthase alp 97.6 0.00057 2E-08 55.0 10.8 120 2-158 102-225 (248)
40 3ovp_A Ribulose-phosphate 3-ep 97.5 0.00029 1E-08 57.4 7.6 122 2-158 81-202 (228)
41 1rd5_A Tryptophan synthase alp 97.4 0.0012 4E-08 54.0 10.0 118 4-158 114-235 (262)
42 1i4n_A Indole-3-glycerol phosp 97.4 0.0016 5.4E-08 54.1 10.7 116 3-158 118-235 (251)
43 2ekc_A AQ_1548, tryptophan syn 97.3 0.0031 1.1E-07 52.0 11.8 123 2-158 116-239 (262)
44 3ctl_A D-allulose-6-phosphate 97.3 0.0022 7.6E-08 52.3 10.4 127 2-158 74-201 (231)
45 3qja_A IGPS, indole-3-glycerol 97.3 0.0024 8.1E-08 53.4 10.7 117 3-158 130-247 (272)
46 3igs_A N-acetylmannosamine-6-p 97.2 0.0057 1.9E-07 49.7 12.4 116 2-159 95-216 (232)
47 3inp_A D-ribulose-phosphate 3- 97.2 0.0012 4E-08 54.7 8.2 126 2-158 103-228 (246)
48 1ujp_A Tryptophan synthase alp 97.2 0.0011 3.8E-08 55.3 8.0 119 2-158 113-234 (271)
49 3cu2_A Ribulose-5-phosphate 3- 97.1 0.0029 1E-07 51.9 9.9 124 2-158 86-222 (237)
50 1rpx_A Protein (ribulose-phosp 97.1 0.0031 1.1E-07 50.2 9.8 120 3-158 86-212 (230)
51 3q58_A N-acetylmannosamine-6-p 97.0 0.0083 2.8E-07 48.7 11.8 116 2-160 95-217 (229)
52 1qop_A Tryptophan synthase alp 97.0 0.0064 2.2E-07 50.1 10.8 120 2-157 116-238 (268)
53 2fli_A Ribulose-phosphate 3-ep 96.9 0.023 7.8E-07 44.5 12.9 122 3-158 79-203 (220)
54 1y0e_A Putative N-acetylmannos 96.6 0.051 1.8E-06 42.6 13.0 36 124-160 175-211 (223)
55 1pii_A N-(5'phosphoribosyl)ant 96.6 0.032 1.1E-06 49.9 12.8 116 4-158 126-241 (452)
56 3jr2_A Hexulose-6-phosphate sy 96.5 0.037 1.3E-06 43.9 11.6 119 2-158 77-199 (218)
57 1xi3_A Thiamine phosphate pyro 96.4 0.033 1.1E-06 43.1 10.7 34 124-158 162-195 (215)
58 1xm3_A Thiazole biosynthesis p 96.4 0.029 9.8E-07 46.2 10.5 121 3-158 87-212 (264)
59 2v82_A 2-dehydro-3-deoxy-6-pho 96.3 0.033 1.1E-06 43.6 10.2 34 124-158 148-181 (212)
60 3vzx_A Heptaprenylglyceryl pho 96.1 0.0099 3.4E-07 48.7 6.2 44 124-169 180-226 (228)
61 3w01_A Heptaprenylglyceryl pho 95.8 0.005 1.7E-07 50.8 3.0 46 124-171 186-234 (235)
62 1h5y_A HISF; histidine biosynt 95.6 0.029 9.9E-07 44.1 6.7 72 82-168 170-244 (253)
63 2tps_A Protein (thiamin phosph 95.5 0.22 7.6E-06 38.8 11.6 34 124-158 172-205 (227)
64 1yxy_A Putative N-acetylmannos 95.2 0.071 2.4E-06 42.2 8.0 35 124-159 186-221 (234)
65 1viz_A PCRB protein homolog; s 95.2 0.023 7.7E-07 46.8 5.1 43 124-168 182-227 (240)
66 2y88_A Phosphoribosyl isomeras 95.0 0.028 9.4E-07 44.7 4.9 70 85-168 168-242 (244)
67 1to3_A Putative aldolase YIHT; 94.6 0.35 1.2E-05 40.7 11.0 130 2-159 115-260 (304)
68 1ka9_F Imidazole glycerol phos 94.6 0.087 3E-06 42.0 6.8 45 124-169 196-243 (252)
69 2f6u_A GGGPS, (S)-3-O-geranylg 94.3 0.028 9.6E-07 46.1 3.4 33 124-158 190-223 (234)
70 1yad_A Regulatory protein TENI 94.0 0.56 1.9E-05 36.7 10.3 34 124-158 164-197 (221)
71 1qo2_A Molecule: N-((5-phospho 93.9 0.035 1.2E-06 44.4 3.2 44 124-167 188-239 (241)
72 3tdn_A FLR symmetric alpha-bet 93.9 0.01 3.5E-07 47.7 0.0 42 124-166 200-244 (247)
73 1vzw_A Phosphoribosyl isomeras 93.9 0.073 2.5E-06 42.4 5.0 45 124-168 190-239 (244)
74 1vhc_A Putative KHG/KDPG aldol 93.8 0.53 1.8E-05 37.9 10.1 118 2-168 83-206 (224)
75 1thf_D HISF protein; thermophI 93.8 0.095 3.3E-06 41.8 5.6 45 124-169 195-242 (253)
76 2gjl_A Hypothetical protein PA 93.8 0.49 1.7E-05 39.5 10.2 34 124-158 172-206 (328)
77 1tqx_A D-ribulose-5-phosphate 93.6 0.37 1.3E-05 39.0 8.9 101 29-158 99-206 (227)
78 1wbh_A KHG/KDPG aldolase; lyas 93.6 0.93 3.2E-05 36.1 11.1 119 2-169 82-206 (214)
79 2z6i_A Trans-2-enoyl-ACP reduc 93.6 0.41 1.4E-05 40.2 9.4 34 124-158 162-196 (332)
80 3vk5_A MOEO5; TIM barrel, tran 93.5 0.09 3.1E-06 44.5 5.1 43 124-166 227-273 (286)
81 2yw3_A 4-hydroxy-2-oxoglutarat 93.4 1.3 4.5E-05 34.9 11.7 43 124-167 151-193 (207)
82 3bo9_A Putative nitroalkan dio 93.3 0.3 1E-05 41.2 8.2 112 3-158 97-210 (326)
83 2w6r_A Imidazole glycerol phos 93.1 0.13 4.5E-06 41.3 5.4 44 124-168 200-246 (266)
84 1mxs_A KDPG aldolase; 2-keto-3 92.9 1.8 6.1E-05 34.7 11.9 119 2-169 92-216 (225)
85 3ffs_A Inosine-5-monophosphate 92.9 0.43 1.5E-05 41.9 8.7 33 124-157 246-279 (400)
86 3khj_A Inosine-5-monophosphate 92.9 0.54 1.9E-05 40.5 9.2 34 124-158 207-241 (361)
87 2agk_A 1-(5-phosphoribosyl)-5- 92.4 0.22 7.7E-06 40.8 5.9 44 124-169 76-126 (260)
88 3tdn_A FLR symmetric alpha-bet 92.1 0.21 7.1E-06 40.0 5.3 44 124-168 79-125 (247)
89 1vhn_A Putative flavin oxidore 91.8 0.1 3.5E-06 43.7 3.2 45 124-168 183-230 (318)
90 3b0p_A TRNA-dihydrouridine syn 91.4 0.13 4.3E-06 44.0 3.4 42 124-167 197-241 (350)
91 4gj1_A 1-(5-phosphoribosyl)-5- 90.2 0.63 2.2E-05 37.6 6.4 45 124-169 75-122 (243)
92 2qjg_A Putative aldolase MJ040 90.0 1.3 4.5E-05 35.6 8.2 34 124-158 202-242 (273)
93 2w6r_A Imidazole glycerol phos 89.8 0.19 6.5E-06 40.4 3.0 43 124-167 74-122 (266)
94 3exr_A RMPD (hexulose-6-phosph 89.7 4.3 0.00015 32.2 10.9 120 2-158 76-201 (221)
95 1vyr_A Pentaerythritol tetrani 89.4 0.29 9.9E-06 42.1 4.0 42 124-165 294-337 (364)
96 1jvn_A Glutamine, bifunctional 89.4 0.49 1.7E-05 42.9 5.7 73 83-169 469-544 (555)
97 3ajx_A 3-hexulose-6-phosphate 89.3 0.34 1.2E-05 37.3 4.0 34 124-158 158-191 (207)
98 1ece_A Endocellulase E1; glyco 89.0 6.2 0.00021 32.4 11.8 122 2-133 51-204 (358)
99 1ka9_F Imidazole glycerol phos 88.8 0.23 8E-06 39.4 2.8 45 124-168 75-121 (252)
100 4gj1_A 1-(5-phosphoribosyl)-5- 88.7 0.67 2.3E-05 37.5 5.5 70 85-168 170-241 (243)
101 2agk_A 1-(5-phosphoribosyl)-5- 88.5 0.66 2.3E-05 38.0 5.4 78 82-169 173-257 (260)
102 3o63_A Probable thiamine-phosp 88.5 0.57 2E-05 38.2 5.0 69 80-158 156-224 (243)
103 1z41_A YQJM, probable NADH-dep 88.5 0.44 1.5E-05 40.2 4.4 45 124-168 277-324 (338)
104 1thf_D HISF protein; thermophI 88.3 0.34 1.2E-05 38.4 3.4 45 124-169 74-121 (253)
105 2r14_A Morphinone reductase; H 88.1 0.33 1.1E-05 42.0 3.5 42 124-165 299-342 (377)
106 2whl_A Beta-mannanase, baman5; 88.0 6.6 0.00023 31.6 11.1 50 2-51 38-87 (294)
107 3cwo_X Beta/alpha-barrel prote 87.8 0.45 1.5E-05 36.2 3.8 45 124-169 174-221 (237)
108 1jub_A Dihydroorotate dehydrog 87.8 0.29 9.9E-06 40.4 2.8 44 124-168 242-289 (311)
109 4fo4_A Inosine 5'-monophosphat 87.8 3.7 0.00013 35.4 9.9 33 124-157 211-244 (366)
110 3gr7_A NADPH dehydrogenase; fl 87.7 0.49 1.7E-05 40.2 4.2 46 124-169 277-325 (340)
111 2gou_A Oxidoreductase, FMN-bin 87.6 0.42 1.4E-05 41.1 3.8 42 124-165 293-336 (365)
112 3hgj_A Chromate reductase; TIM 87.5 0.75 2.6E-05 39.1 5.3 46 124-169 288-336 (349)
113 1o4u_A Type II quinolic acid p 87.2 2 6.9E-05 35.9 7.7 52 97-158 222-273 (285)
114 2nv1_A Pyridoxal biosynthesis 87.1 0.45 1.5E-05 39.5 3.6 34 124-158 207-243 (305)
115 3jug_A Beta-mannanase; TIM-bar 87.0 7 0.00024 33.1 11.1 50 2-51 61-110 (345)
116 2hsa_B 12-oxophytodienoate red 87.0 0.48 1.6E-05 41.3 3.8 43 124-166 319-363 (402)
117 3l5l_A Xenobiotic reductase A; 86.5 0.69 2.4E-05 39.6 4.6 46 124-169 295-343 (363)
118 3iwp_A Copper homeostasis prot 86.4 0.57 1.9E-05 39.6 3.9 31 122-152 207-237 (287)
119 1ep3_A Dihydroorotate dehydrog 86.4 0.35 1.2E-05 39.6 2.5 44 124-168 241-287 (311)
120 3o07_A Pyridoxine biosynthesis 86.1 0.79 2.7E-05 38.8 4.5 34 124-158 198-234 (291)
121 3aof_A Endoglucanase; glycosyl 85.7 12 0.00039 30.1 11.4 50 2-51 40-97 (317)
122 1qpo_A Quinolinate acid phosph 85.7 1.7 5.6E-05 36.4 6.3 52 97-158 223-274 (284)
123 3gka_A N-ethylmaleimide reduct 85.6 0.73 2.5E-05 39.7 4.3 43 124-166 287-331 (361)
124 2zbt_A Pyridoxal biosynthesis 85.3 0.46 1.6E-05 39.1 2.7 34 124-158 207-243 (297)
125 4ab4_A Xenobiotic reductase B; 84.9 0.69 2.4E-05 39.9 3.7 43 124-166 279-323 (362)
126 1bqc_A Protein (beta-mannanase 84.3 14 0.00046 29.8 11.2 49 2-50 39-87 (302)
127 3ceu_A Thiamine phosphate pyro 84.3 1.9 6.5E-05 33.6 5.8 76 81-169 109-195 (210)
128 1wa3_A 2-keto-3-deoxy-6-phosph 84.1 0.54 1.8E-05 36.2 2.5 34 124-158 150-183 (205)
129 3nl6_A Thiamine biosynthetic b 84.0 2 6.9E-05 38.9 6.6 71 80-158 132-214 (540)
130 3aty_A Tcoye, prostaglandin F2 83.9 0.79 2.7E-05 39.6 3.7 42 124-165 307-350 (379)
131 3ujp_A Mn transporter subunit; 83.7 3.2 0.00011 34.7 7.3 74 64-148 175-264 (307)
132 1qo2_A Molecule: N-((5-phospho 83.6 0.36 1.2E-05 38.3 1.3 44 124-168 73-118 (241)
133 1vzw_A Phosphoribosyl isomeras 83.2 1.5 5.2E-05 34.5 4.9 45 124-169 75-122 (244)
134 2bdq_A Copper homeostasis prot 83.1 1.2 4E-05 36.4 4.2 122 2-152 83-206 (224)
135 2yzr_A Pyridoxal biosynthesis 82.8 1.8 6.1E-05 37.2 5.4 33 124-157 240-275 (330)
136 2e6f_A Dihydroorotate dehydrog 82.8 0.92 3.1E-05 37.4 3.5 44 124-168 244-291 (314)
137 2y88_A Phosphoribosyl isomeras 82.7 1.7 5.7E-05 34.2 4.9 45 124-169 74-121 (244)
138 2b7n_A Probable nicotinate-nuc 82.7 2.3 7.8E-05 35.1 5.9 50 97-156 211-260 (273)
139 1icp_A OPR1, 12-oxophytodienoa 82.7 0.71 2.4E-05 39.8 2.9 43 124-166 301-345 (376)
140 1q6o_A Humps, 3-keto-L-gulonat 82.5 1.3 4.6E-05 34.6 4.2 115 3-158 75-196 (216)
141 3kru_A NADH:flavin oxidoreduct 82.0 1.1 3.9E-05 38.1 3.9 41 124-164 277-320 (343)
142 3mfq_A TROA, high-affinity zin 81.9 3.3 0.00011 34.0 6.6 77 64-151 148-243 (282)
143 1toa_A Tromp-1, protein (perip 81.5 6.5 0.00022 32.8 8.4 74 64-148 182-276 (313)
144 3hh8_A Metal ABC transporter s 81.5 2.2 7.4E-05 35.4 5.4 60 80-150 184-259 (294)
145 4adt_A Pyridoxine biosynthetic 81.1 0.95 3.2E-05 38.1 3.0 34 124-158 207-243 (297)
146 1xvl_A Mn transporter, MNTC pr 81.0 6.3 0.00022 33.0 8.1 73 66-149 191-279 (321)
147 3l5a_A NADH/flavin oxidoreduct 80.3 1.6 5.4E-05 38.3 4.3 51 105-165 307-360 (419)
148 1wky_A Endo-beta-1,4-mannanase 80.1 23 0.00079 30.9 11.8 50 2-51 46-95 (464)
149 2prs_A High-affinity zinc upta 79.4 9.7 0.00033 31.0 8.6 72 64-148 161-248 (284)
150 2jbm_A Nicotinate-nucleotide p 79.0 3.1 0.00011 34.8 5.6 50 97-156 226-275 (299)
151 4hty_A Cellulase; (alpha/beta) 78.8 7.2 0.00024 32.6 7.8 125 2-132 92-230 (359)
152 4e38_A Keto-hydroxyglutarate-a 78.2 25 0.00086 28.3 10.9 45 124-169 174-224 (232)
153 3usb_A Inosine-5'-monophosphat 78.2 16 0.00056 32.5 10.3 32 124-156 359-391 (511)
154 3gi1_A LBP, laminin-binding pr 77.9 9.9 0.00034 31.1 8.3 75 65-152 167-257 (286)
155 2c0h_A Mannan endo-1,4-beta-ma 75.8 17 0.00058 29.4 9.2 47 2-48 52-111 (353)
156 3cx3_A Lipoprotein; zinc-bindi 75.5 31 0.0011 28.0 10.7 75 65-152 165-255 (284)
157 3tqv_A Nicotinate-nucleotide p 75.4 2.9 0.0001 35.1 4.4 46 97-155 227-272 (287)
158 3l0g_A Nicotinate-nucleotide p 74.9 3.2 0.00011 35.2 4.5 48 97-157 236-283 (300)
159 1twd_A Copper homeostasis prot 74.5 1.7 6E-05 36.0 2.7 117 2-153 80-198 (256)
160 1qnr_A Endo-1,4-B-D-mannanase; 73.7 33 0.0011 27.5 11.9 47 2-48 43-110 (344)
161 1gte_A Dihydropyrimidine dehyd 73.2 22 0.00075 34.2 10.4 43 124-167 787-833 (1025)
162 1eep_A Inosine 5'-monophosphat 72.5 11 0.00036 32.3 7.3 33 124-157 256-289 (404)
163 4h41_A Putative alpha-L-fucosi 72.2 18 0.00063 30.8 8.7 86 2-87 61-166 (340)
164 3r2g_A Inosine 5'-monophosphat 71.6 38 0.0013 29.0 10.6 32 126-158 201-233 (361)
165 3kts_A Glycerol uptake operon 70.3 5.3 0.00018 31.6 4.5 34 124-157 150-183 (192)
166 1f76_A Dihydroorotate dehydrog 70.2 3.7 0.00013 34.1 3.8 43 123-166 288-334 (336)
167 1h5y_A HISF; histidine biosynt 69.6 3.6 0.00012 31.8 3.4 45 124-169 77-124 (253)
168 2w61_A GAS2P, glycolipid-ancho 69.4 49 0.0017 29.9 11.3 118 2-132 94-216 (555)
169 1pq4_A Periplasmic binding pro 69.3 11 0.00039 30.8 6.6 59 79-148 190-262 (291)
170 1qtw_A Endonuclease IV; DNA re 68.8 13 0.00046 28.9 6.7 78 29-109 90-168 (285)
171 3qja_A IGPS, indole-3-glycerol 68.4 11 0.00036 31.0 6.2 45 124-168 113-158 (272)
172 4fxs_A Inosine-5'-monophosphat 68.3 17 0.00058 32.2 7.9 33 124-157 334-367 (496)
173 2hk0_A D-psicose 3-epimerase; 68.2 26 0.0009 27.9 8.5 104 3-109 74-193 (309)
174 1ps9_A 2,4-dienoyl-COA reducta 67.6 3.1 0.00011 37.8 3.0 42 124-165 280-324 (671)
175 4aaj_A N-(5'-phosphoribosyl)an 67.6 3.6 0.00012 33.1 3.1 48 91-154 156-203 (228)
176 1r30_A Biotin synthase; SAM ra 67.5 30 0.001 28.8 9.0 150 2-169 163-332 (369)
177 3zwt_A Dihydroorotate dehydrog 67.4 3.8 0.00013 35.2 3.4 58 103-169 285-346 (367)
178 3gnn_A Nicotinate-nucleotide p 67.4 9.9 0.00034 32.0 5.8 49 97-158 238-286 (298)
179 3bw2_A 2-nitropropane dioxygen 66.7 2.9 9.9E-05 35.4 2.5 34 124-158 208-242 (369)
180 2yxb_A Coenzyme B12-dependent 66.1 7.2 0.00025 29.3 4.4 52 97-157 81-132 (161)
181 3dx5_A Uncharacterized protein 65.1 37 0.0013 26.4 8.6 103 2-109 55-162 (286)
182 3iv3_A Tagatose 1,6-diphosphat 65.0 7 0.00024 33.4 4.5 38 122-159 243-286 (332)
183 3paj_A Nicotinate-nucleotide p 64.9 5.5 0.00019 34.0 3.8 46 97-155 260-305 (320)
184 1hjs_A Beta-1,4-galactanase; 4 64.9 60 0.002 27.0 11.7 46 2-48 34-80 (332)
185 3kws_A Putative sugar isomeras 63.9 28 0.00096 27.2 7.7 106 2-109 71-188 (287)
186 1vc4_A Indole-3-glycerol phosp 63.7 4.5 0.00015 32.9 3.0 44 124-167 106-149 (254)
187 2o1e_A YCDH; alpha-beta protei 63.6 14 0.00048 30.7 6.1 72 65-149 178-265 (312)
188 1egz_A Endoglucanase Z, EGZ, C 63.4 53 0.0018 25.9 11.0 48 3-50 46-99 (291)
189 3fkr_A L-2-keto-3-deoxyarabona 63.1 11 0.00037 31.4 5.3 51 96-154 57-111 (309)
190 1v5x_A PRA isomerase, phosphor 62.8 5.2 0.00018 31.6 3.1 49 91-155 128-176 (203)
191 3ngf_A AP endonuclease, family 62.4 17 0.00059 28.4 6.2 106 2-109 55-175 (269)
192 1o94_A Tmadh, trimethylamine d 62.2 4.3 0.00015 37.4 2.9 42 124-165 291-335 (729)
193 1geq_A Tryptophan synthase alp 62.2 8.1 0.00028 30.3 4.2 45 124-168 80-132 (248)
194 4a29_A Engineered retro-aldol 61.6 43 0.0015 27.6 8.6 124 5-166 123-248 (258)
195 3cqj_A L-ribulose-5-phosphate 61.4 15 0.00051 29.0 5.7 103 3-109 74-186 (295)
196 2qw5_A Xylose isomerase-like T 61.3 16 0.00055 29.6 6.0 46 2-47 72-128 (335)
197 4avf_A Inosine-5'-monophosphat 61.3 6 0.0002 35.1 3.5 33 124-157 332-365 (490)
198 2zvr_A Uncharacterized protein 61.1 45 0.0015 26.1 8.5 103 2-109 75-192 (290)
199 1tvn_A Cellulase, endoglucanas 61.1 42 0.0014 26.6 8.4 48 3-50 46-101 (293)
200 3i65_A Dihydroorotate dehydrog 59.1 5.9 0.0002 34.9 3.1 46 123-169 344-393 (415)
201 1w8s_A FBP aldolase, fructose- 57.7 14 0.00047 30.0 4.9 33 125-158 197-236 (263)
202 4a3u_A NCR, NADH\:flavin oxido 57.5 6.1 0.00021 33.6 2.8 39 124-162 286-325 (358)
203 3k30_A Histamine dehydrogenase 57.4 5.1 0.00018 36.5 2.5 42 124-165 294-338 (690)
204 1x1o_A Nicotinate-nucleotide p 57.2 5.3 0.00018 33.3 2.4 54 81-156 218-271 (286)
205 3oix_A Putative dihydroorotate 57.0 5.6 0.00019 33.9 2.5 45 124-169 275-323 (345)
206 1ccw_A Protein (glutamate muta 56.7 8.4 0.00029 28.0 3.2 54 97-158 66-124 (137)
207 3tsm_A IGPS, indole-3-glycerol 56.5 27 0.00093 28.7 6.6 45 124-168 120-165 (272)
208 4ef8_A Dihydroorotate dehydrog 56.3 6.6 0.00023 33.6 2.9 45 124-169 277-325 (354)
209 2i14_A Nicotinate-nucleotide p 55.7 8.3 0.00028 33.5 3.4 50 100-155 248-297 (395)
210 2x7v_A Probable endonuclease 4 55.7 30 0.001 26.8 6.5 77 29-109 90-167 (287)
211 1i60_A IOLI protein; beta barr 54.6 28 0.00097 26.7 6.1 80 28-109 84-164 (278)
212 3tva_A Xylose isomerase domain 54.3 33 0.0011 26.8 6.6 72 28-109 102-174 (290)
213 2i1o_A Nicotinate phosphoribos 54.2 13 0.00045 32.3 4.5 51 100-155 250-300 (398)
214 3aal_A Probable endonuclease 4 53.5 31 0.0011 27.4 6.4 76 29-109 95-172 (303)
215 3c2e_A Nicotinate-nucleotide p 53.2 7.7 0.00026 32.3 2.7 54 97-158 228-282 (294)
216 3fn9_A Putative beta-galactosi 53.0 1.1E+02 0.0039 28.1 10.8 107 2-133 325-434 (692)
217 3nco_A Endoglucanase fncel5A; 52.6 88 0.003 25.0 13.8 51 2-52 48-106 (320)
218 1fob_A Beta-1,4-galactanase; B 52.0 22 0.00075 29.6 5.4 46 2-48 34-80 (334)
219 3qho_A Endoglucanase, 458AA lo 51.9 98 0.0033 27.0 9.8 49 2-50 91-156 (458)
220 1k77_A EC1530, hypothetical pr 50.8 32 0.0011 26.3 5.9 107 2-109 47-168 (260)
221 1qap_A Quinolinic acid phospho 49.8 15 0.00051 30.7 3.9 46 97-155 237-282 (296)
222 3pzt_A Endoglucanase; alpha/be 49.5 1.1E+02 0.0036 25.1 9.8 115 5-132 79-200 (327)
223 3ohe_A Histidine triad (HIT) p 49.1 19 0.00066 26.2 4.1 29 87-115 107-135 (137)
224 3civ_A Endo-beta-1,4-mannanase 48.9 32 0.0011 29.0 5.9 45 2-46 60-115 (343)
225 2q02_A Putative cytoplasmic pr 48.8 60 0.0021 24.8 7.2 73 30-109 87-161 (272)
226 2qul_A D-tagatose 3-epimerase; 48.7 32 0.0011 26.7 5.6 105 2-109 54-175 (290)
227 3vup_A Beta-1,4-mannanase; TIM 48.2 47 0.0016 25.6 6.5 47 2-48 49-110 (351)
228 1rh9_A Endo-beta-mannanase; en 48.1 1.1E+02 0.0038 24.9 10.6 48 2-49 49-106 (373)
229 1whs_A Serine carboxypeptidase 47.4 8.5 0.00029 31.5 2.0 61 99-160 122-189 (255)
230 1jvn_A Glutamine, bifunctional 47.1 11 0.00037 34.0 2.8 34 124-158 327-372 (555)
231 1uuq_A Mannosyl-oligosaccharid 46.8 1.3E+02 0.0045 25.4 10.6 48 2-49 69-132 (440)
232 3u0h_A Xylose isomerase domain 44.6 64 0.0022 24.7 6.8 79 30-109 86-169 (281)
233 3sz8_A 2-dehydro-3-deoxyphosph 44.1 30 0.001 28.8 4.9 27 144-170 232-271 (285)
234 3qze_A DHDPS, dihydrodipicolin 43.9 35 0.0012 28.3 5.4 53 92-152 68-124 (314)
235 3bga_A Beta-galactosidase; NYS 43.7 1.6E+02 0.0054 28.6 10.5 106 2-132 379-492 (1010)
236 1yq2_A Beta-galactosidase; gly 43.7 1.7E+02 0.0057 28.5 10.7 105 2-131 356-470 (1024)
237 3flu_A DHDPS, dihydrodipicolin 43.6 36 0.0012 27.9 5.3 53 92-152 52-108 (297)
238 7a3h_A Endoglucanase; hydrolas 43.6 1.2E+02 0.0042 24.1 10.4 48 3-50 51-102 (303)
239 3vni_A Xylose isomerase domain 43.1 1.1E+02 0.0039 23.6 8.3 106 2-109 54-174 (294)
240 3q6z_A Poly [ADP-ribose] polym 42.8 32 0.0011 27.2 4.8 52 61-115 129-182 (214)
241 3qxb_A Putative xylose isomera 42.5 63 0.0021 25.7 6.6 103 3-109 78-200 (316)
242 3i24_A HIT family hydrolase; s 42.3 25 0.00086 26.2 3.8 30 87-116 107-136 (149)
243 3fs2_A 2-dehydro-3-deoxyphosph 42.1 33 0.0011 28.8 4.9 27 144-170 251-290 (298)
244 1tv5_A Dhodehase, dihydroorota 41.9 20 0.00067 31.6 3.6 45 123-168 372-420 (443)
245 1cpy_A Serine carboxypeptidase 41.8 27 0.00092 30.4 4.5 69 90-159 96-181 (421)
246 2osx_A Endoglycoceramidase II; 41.4 1.7E+02 0.0058 25.1 10.5 48 2-49 73-126 (481)
247 1p0k_A Isopentenyl-diphosphate 40.6 28 0.00095 28.9 4.3 34 124-158 251-285 (349)
248 1gox_A (S)-2-hydroxy-acid oxid 40.5 18 0.00063 30.6 3.2 35 123-158 279-314 (370)
249 3si9_A DHDPS, dihydrodipicolin 40.5 37 0.0013 28.2 5.0 68 93-168 66-147 (315)
250 1jz7_A Lactase, beta-galactosi 40.3 1.8E+02 0.0062 28.2 10.4 106 2-132 377-489 (1023)
251 3gm8_A Glycoside hydrolase fam 39.4 2.4E+02 0.0082 26.5 10.9 96 2-112 314-415 (801)
252 2y8k_A Arabinoxylanase, carboh 38.9 1.9E+02 0.0065 25.0 12.7 50 2-51 46-103 (491)
253 3pzg_A Mannan endo-1,4-beta-ma 38.3 1.9E+02 0.0063 24.7 12.4 49 2-50 50-122 (383)
254 3daq_A DHDPS, dihydrodipicolin 37.5 39 0.0013 27.6 4.6 53 92-152 47-103 (292)
255 3iix_A Biotin synthetase, puta 37.4 1.6E+02 0.0055 23.6 8.4 130 2-151 146-291 (348)
256 2re2_A Uncharacterized protein 36.9 28 0.00097 25.2 3.3 38 2-52 73-110 (136)
257 3s5o_A 4-hydroxy-2-oxoglutarat 36.7 35 0.0012 28.1 4.2 51 96-154 63-117 (307)
258 2nzl_A Hydroxyacid oxidase 1; 36.4 26 0.00089 30.1 3.5 35 123-158 306-341 (392)
259 2vws_A YFAU, 2-keto-3-deoxy su 36.3 18 0.00062 29.3 2.3 122 2-155 33-178 (267)
260 3i4s_A Histidine triad protein 36.2 36 0.0012 25.3 3.9 29 86-114 111-139 (149)
261 4e8d_A Glycosyl hydrolase, fam 36.1 36 0.0012 31.3 4.5 48 2-49 39-92 (595)
262 1nsj_A PRAI, phosphoribosyl an 36.0 18 0.0006 28.4 2.2 50 91-155 133-182 (205)
263 3eb2_A Putative dihydrodipicol 35.6 28 0.00096 28.6 3.4 68 93-168 48-129 (300)
264 1ivy_A Human protective protei 35.5 25 0.00086 30.8 3.3 69 91-160 102-184 (452)
265 1zfj_A Inosine monophosphate d 35.0 40 0.0014 29.2 4.5 33 124-157 336-369 (491)
266 2nli_A Lactate oxidase; flavoe 34.9 27 0.00093 29.7 3.3 35 123-158 283-318 (368)
267 3lpf_A Beta-glucuronidase; alp 34.5 1.4E+02 0.0048 26.8 8.2 37 2-48 318-354 (605)
268 3d0c_A Dihydrodipicolinate syn 34.1 56 0.0019 27.0 5.1 66 95-168 60-136 (314)
269 3obe_A Sugar phosphate isomera 33.8 37 0.0013 27.3 3.8 84 2-89 83-172 (305)
270 2ojp_A DHDPS, dihydrodipicolin 33.5 87 0.003 25.4 6.1 53 96-156 50-106 (292)
271 1rdu_A Conserved hypothetical 33.4 31 0.0011 23.8 2.9 38 2-51 56-93 (116)
272 3hn3_A Beta-G1, beta-glucuroni 33.2 2.4E+02 0.0081 25.1 9.5 36 2-47 351-386 (613)
273 1ceo_A Cellulase CELC; glycosy 33.2 1.9E+02 0.0063 23.1 10.1 49 2-50 35-91 (343)
274 1nrp_R Receptor based peptide 32.8 10 0.00035 20.2 0.2 7 84-90 14-20 (26)
275 3cmg_A Putative beta-galactosi 32.0 2.4E+02 0.0081 25.5 9.3 96 2-112 311-417 (667)
276 2qr6_A IMP dehydrogenase/GMP r 31.9 45 0.0015 28.2 4.2 30 124-154 211-240 (393)
277 3vnd_A TSA, tryptophan synthas 31.5 57 0.0019 26.6 4.6 45 124-168 95-147 (267)
278 1eo1_A Hypothetical protein MT 31.4 32 0.0011 24.1 2.8 38 2-51 59-96 (124)
279 4af0_A Inosine-5'-monophosphat 30.8 43 0.0015 30.6 4.0 31 123-154 321-351 (556)
280 1ur4_A Galactanase; hydrolase, 30.6 79 0.0027 27.3 5.6 47 2-48 55-109 (399)
281 3d3a_A Beta-galactosidase; pro 30.6 60 0.002 29.7 5.0 48 2-49 44-97 (612)
282 1dxe_A 2-dehydro-3-deoxy-galac 30.4 26 0.00089 28.0 2.3 123 2-156 34-179 (256)
283 2hl0_A Threonyl-tRNA synthetas 30.3 1.7E+02 0.0059 21.9 7.0 70 39-116 36-108 (143)
284 1nro_R Receptor based peptide 30.3 12 0.0004 20.1 0.2 7 84-90 14-20 (27)
285 1pii_A N-(5'phosphoribosyl)ant 30.3 28 0.00095 30.8 2.7 46 91-154 383-428 (452)
286 2v5j_A 2,4-dihydroxyhept-2-ENE 29.2 22 0.00076 29.2 1.8 123 2-156 54-200 (287)
287 3a5f_A Dihydrodipicolinate syn 29.0 84 0.0029 25.5 5.3 54 96-157 50-107 (291)
288 3na8_A Putative dihydrodipicol 29.0 74 0.0025 26.3 5.0 65 96-168 73-149 (315)
289 1zco_A 2-dehydro-3-deoxyphosph 28.7 83 0.0029 25.4 5.2 28 143-170 217-257 (262)
290 1spv_A Putative polyprotein/ph 28.1 1.1E+02 0.0037 23.2 5.5 53 60-115 93-147 (184)
291 1vjz_A Endoglucanase; TM1752, 27.7 2.3E+02 0.008 22.6 9.7 47 2-48 43-97 (341)
292 2qr6_A IMP dehydrogenase/GMP r 27.7 71 0.0024 26.9 4.7 33 124-157 277-310 (393)
293 1yx1_A Hypothetical protein PA 27.6 60 0.002 25.0 4.0 68 28-110 84-152 (264)
294 3l21_A DHDPS, dihydrodipicolin 27.6 75 0.0026 26.1 4.8 55 93-155 59-119 (304)
295 2xd7_A Core histone macro-H2A. 27.5 1.1E+02 0.0038 23.4 5.5 66 44-115 97-164 (193)
296 1tg7_A Beta-galactosidase; TIM 27.3 58 0.002 31.6 4.5 48 2-49 43-96 (971)
297 3txv_A Probable tagatose 6-pho 27.3 2.6E+02 0.0089 24.7 8.4 129 32-166 115-280 (450)
298 1yy3_A S-adenosylmethionine:tR 26.9 27 0.00094 30.0 2.0 32 16-52 229-260 (346)
299 2yx6_A Hypothetical protein PH 26.9 37 0.0013 23.6 2.4 38 2-51 57-94 (121)
300 1ypf_A GMP reductase; GUAC, pu 26.6 39 0.0013 28.1 2.9 33 124-157 210-243 (336)
301 3tty_A Beta-GAL, beta-galactos 26.3 44 0.0015 30.7 3.4 47 2-50 30-82 (675)
302 1kwg_A Beta-galactosidase; TIM 26.2 40 0.0014 30.5 3.0 45 2-48 21-71 (645)
303 3ksv_A Uncharacterized protein 26.1 66 0.0023 23.5 3.8 28 85-115 121-148 (149)
304 1ydn_A Hydroxymethylglutaryl-C 26.1 2.2E+02 0.0074 22.8 7.3 101 3-112 87-196 (295)
305 3sgz_A Hydroxyacid oxidase 2; 25.7 51 0.0018 28.1 3.5 35 123-158 271-306 (352)
306 3pa8_A Toxin B; CLAN CD cystei 25.7 52 0.0018 27.1 3.3 94 2-95 95-208 (254)
307 1req_A Methylmalonyl-COA mutas 25.5 69 0.0023 30.2 4.5 51 98-157 660-710 (727)
308 1vrd_A Inosine-5'-monophosphat 25.4 50 0.0017 28.7 3.4 33 124-157 340-373 (494)
309 3nrd_A Histidine triad (HIT) p 25.3 53 0.0018 23.7 3.1 27 86-112 108-134 (135)
310 3can_A Pyruvate-formate lyase- 25.1 1.9E+02 0.0067 20.8 6.5 56 94-160 12-68 (182)
311 3tjl_A NADPH dehydrogenase; OL 24.9 31 0.0011 30.1 2.0 43 124-166 313-361 (407)
312 1ac5_A KEX1(delta)P; carboxype 24.8 41 0.0014 29.6 2.8 59 101-160 147-218 (483)
313 2vc6_A MOSA, dihydrodipicolina 24.8 99 0.0034 25.1 5.0 53 92-152 45-101 (292)
314 3thd_A Beta-galactosidase; TIM 24.7 72 0.0025 29.7 4.5 48 2-49 47-100 (654)
315 1izc_A Macrophomate synthase i 24.7 33 0.0011 29.0 2.1 121 3-155 58-210 (339)
316 3icg_A Endoglucanase D; cellul 24.7 3.4E+02 0.012 23.5 9.5 50 2-51 52-109 (515)
317 3c8f_A Pyruvate formate-lyase 24.7 1.5E+02 0.0052 21.9 5.8 56 94-160 78-136 (245)
318 3ub6_A Chemoreceptor TLPB; hom 24.2 38 0.0013 25.6 2.1 31 85-117 143-174 (181)
319 2wje_A CPS4B, tyrosine-protein 24.1 80 0.0028 24.5 4.2 36 2-42 127-162 (247)
320 1muw_A Xylose isomerase; atomi 24.1 67 0.0023 26.8 3.9 80 28-107 116-203 (386)
321 1xla_A D-xylose isomerase; iso 24.0 30 0.001 29.1 1.6 80 28-107 116-203 (394)
322 2k1h_A Uncharacterized protein 23.8 39 0.0014 23.5 2.0 19 136-154 40-58 (94)
323 1yd9_A Core histone macro-H2A. 23.7 1.2E+02 0.0042 23.2 5.1 54 59-115 106-161 (193)
324 4awe_A Endo-beta-D-1,4-mannana 23.6 2.5E+02 0.0085 21.4 9.9 16 34-49 107-122 (387)
325 1kbi_A Cytochrome B2, L-LCR; f 23.5 39 0.0013 30.1 2.4 36 122-158 401-437 (511)
326 2czd_A Orotidine 5'-phosphate 23.5 84 0.0029 23.9 4.1 31 127-158 158-190 (208)
327 3r6f_A HIT family protein; str 23.3 78 0.0027 22.5 3.6 27 85-114 108-134 (135)
328 2f7f_A Nicotinate phosphoribos 23.1 94 0.0032 27.7 4.8 31 124-154 286-317 (494)
329 3nav_A Tryptophan synthase alp 22.9 1E+02 0.0034 25.2 4.6 33 136-168 115-149 (271)
330 1vlp_A Naprtase, nicotinate ph 22.8 96 0.0033 27.2 4.7 50 103-155 313-368 (441)
331 2xij_A Methylmalonyl-COA mutas 22.8 79 0.0027 29.9 4.4 52 97-157 667-718 (762)
332 3r2g_A Inosine 5'-monophosphat 22.6 87 0.003 26.7 4.3 44 100-153 126-169 (361)
333 2x47_A Macro domain-containing 22.4 1.2E+02 0.0041 24.2 4.9 52 61-115 150-203 (235)
334 3cny_A Inositol catabolism pro 22.1 1.7E+02 0.0057 22.6 5.7 100 3-107 63-178 (301)
335 4gi5_A Quinone reductase; prot 22.1 1.8E+02 0.0061 23.7 6.0 13 78-91 113-125 (280)
336 3h5d_A DHDPS, dihydrodipicolin 22.1 1E+02 0.0036 25.3 4.6 55 93-155 51-112 (311)
337 3qz6_A HPCH/HPAI aldolase; str 22.0 46 0.0016 26.8 2.3 125 3-157 32-178 (261)
338 2c6q_A GMP reductase 2; TIM ba 22.0 97 0.0033 26.0 4.5 30 124-154 161-190 (351)
339 1vkf_A Glycerol uptake operon 21.9 53 0.0018 25.8 2.6 33 124-157 149-181 (188)
340 3tjx_A Dihydroorotate dehydrog 21.6 63 0.0022 26.9 3.2 47 123-170 276-326 (354)
341 2g0w_A LMO2234 protein; putati 21.6 2.9E+02 0.0098 21.5 11.3 92 3-109 76-174 (296)
342 3lab_A Putative KDPG (2-keto-3 21.6 96 0.0033 24.7 4.1 46 123-170 158-210 (217)
343 1pqx_A Conserved hypothetical 21.4 41 0.0014 23.3 1.7 19 136-154 40-58 (91)
344 3t7v_A Methylornithine synthas 21.4 1.7E+02 0.0059 23.7 5.9 100 2-113 156-269 (350)
345 3ho6_A Toxin A; inositol phosp 21.4 89 0.003 25.9 3.9 36 2-37 98-138 (267)
346 1qv9_A F420-dependent methylen 21.2 1.3E+02 0.0045 24.9 4.9 60 88-157 35-102 (283)
347 1o13_A Probable NIFB protein; 21.0 50 0.0017 23.9 2.2 38 2-51 70-107 (136)
348 3p6l_A Sugar phosphate isomera 21.0 2.7E+02 0.0093 21.0 8.4 83 2-106 70-152 (262)
349 3b4u_A Dihydrodipicolinate syn 20.7 85 0.0029 25.5 3.7 65 96-168 52-129 (294)
350 3l21_A DHDPS, dihydrodipicolin 20.7 3.4E+02 0.012 22.0 12.7 135 3-165 44-188 (304)
351 3kh6_A Poly [ADP-ribose] polym 20.5 1.4E+02 0.0049 23.2 4.9 50 64-116 113-164 (199)
352 4abl_A Poly [ADP-ribose] polym 20.4 1.4E+02 0.0049 22.7 4.8 50 64-116 102-153 (183)
353 1wdi_A Hypothetical protein TT 20.4 28 0.00094 30.0 0.7 32 16-52 229-260 (345)
354 3imi_A HIT family protein; str 20.4 43 0.0015 24.3 1.7 28 85-113 119-146 (147)
355 1jcn_A Inosine monophosphate d 20.3 72 0.0024 27.9 3.4 34 124-158 358-392 (514)
356 4dpp_A DHDPS 2, dihydrodipicol 20.3 1.6E+02 0.0054 25.1 5.5 54 93-154 103-162 (360)
357 3lno_A Putative uncharacterize 20.2 91 0.0031 21.5 3.3 32 59-90 58-92 (108)
358 3aam_A Endonuclease IV, endoiv 20.1 2.7E+02 0.0093 21.1 6.5 31 79-109 132-162 (270)
359 2qkf_A 3-deoxy-D-manno-octulos 20.1 1E+02 0.0035 25.2 4.1 28 143-170 226-266 (280)
No 1
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=100.00 E-value=1e-70 Score=465.52 Aligned_cols=172 Identities=47% Similarity=0.694 Sum_probs=164.8
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 85 ~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCvGEtleeReag~t~~vv~~Ql~~~l~~l~~~~~ 164 (267)
T 3ta6_A 85 GAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQI 164 (267)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHcCCCEEEEcchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHHHHhcCCHHHh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998863 7
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|++||+++++.|+.+.++++|||||||||++|+++|++++||||+|||||||+
T Consensus 165 ~~vvIAYEPVWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~el~~~~diDG~LVGgASL~ 244 (267)
T 3ta6_A 165 GSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLD 244 (267)
T ss_dssp TTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS
T ss_pred CCEEEEECChhhhcCCcCCCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcC
Confidence 89999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hH-HHHHHHHHhhhc
Q 039862 159 PE-FIDIIKSATVKK 172 (173)
Q Consensus 159 ~~-f~~Ii~~~~~~~ 172 (173)
++ |.+||+...+.|
T Consensus 245 ~~~F~~Ii~~~~~~~ 259 (267)
T 3ta6_A 245 GEHFATLAAIAAGGP 259 (267)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcCC
Confidence 86 999999877643
No 2
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=4e-70 Score=457.04 Aligned_cols=167 Identities=56% Similarity=0.959 Sum_probs=160.8
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~~~~~ 153 (244)
T 2v5b_A 74 LASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAW 153 (244)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGG
T ss_pred HHHHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998864 6
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||+++++.|+.++++++||||||||||+|+.+|++++||||+|||||||+
T Consensus 154 ~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~ 233 (244)
T 2v5b_A 154 SRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLK 233 (244)
T ss_dssp GGEEEEECCHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCHHHHHHHHTSTTCCEEEESGGGSS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHhHHHHHhcCCCCCeeeechHHHH
Confidence 78999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 039862 159 PEFIDIIKS 167 (173)
Q Consensus 159 ~~f~~Ii~~ 167 (173)
++|.+|++.
T Consensus 234 ~~F~~Ii~~ 242 (244)
T 2v5b_A 234 PEFVEIIEA 242 (244)
T ss_dssp TTHHHHHHT
T ss_pred HHHHHHHHh
Confidence 339999974
No 3
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=100.00 E-value=1.3e-69 Score=456.43 Aligned_cols=172 Identities=50% Similarity=0.894 Sum_probs=165.1
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccC--CC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NW 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~--~~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++ .+
T Consensus 82 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 161 (255)
T 3qst_A 82 VPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKW 161 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHGGGSCTTCG
T ss_pred HHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHHcCCHHHHHHHHHHHHHccCCHHHh
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999865 37
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+|++++++|++||+++++.|+...++++||||||||+++|+.+++.++||||+|||||||+
T Consensus 162 ~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~ 241 (255)
T 3qst_A 162 DDVVIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNELAACPDVDGFLVGGASLE 241 (255)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS
T ss_pred CCEEEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh
Confidence 89999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhc
Q 039862 159 PEFIDIIKSATVKK 172 (173)
Q Consensus 159 ~~f~~Ii~~~~~~~ 172 (173)
++|.+||+....+|
T Consensus 242 ~~F~~Ii~~~~~~~ 255 (255)
T 3qst_A 242 AGFINIVNSNVHSK 255 (255)
T ss_dssp TTHHHHHGGGGGCC
T ss_pred HHHHHHHHHHhhCC
Confidence 88999998876543
No 4
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=100.00 E-value=2.5e-69 Score=457.96 Aligned_cols=164 Identities=51% Similarity=0.748 Sum_probs=157.7
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||.+|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|++++. +
T Consensus 105 a~MLkd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlCVGEtleeReag~t~~vv~~Ql~~~l~~~~~~~~ 184 (272)
T 4g1k_A 105 AGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVGETLAEREAGTTEQVVGAQLDAVLAVLSPDEA 184 (272)
T ss_dssp HHHHHTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHHHHHHHhCCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998863 6
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||+++++.| ++++||||||||||+|+.+|++++||||+|||||||+
T Consensus 185 ~~vVIAYEPVWAIGTG~tAt~e~aqevh~~IR~~l~~~~----a~~~rIlYGGSV~~~N~~el~~~~dIDG~LVGgASL~ 260 (272)
T 4g1k_A 185 ARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLAAKG----AGHVSLLYGGSVKADNAAELFGQPDIDGGLIGGASLK 260 (272)
T ss_dssp TTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHT----CTTSCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS
T ss_pred CCEEEEECcHhhccCCCCCCHHHHHHHHHHHHHHHHHhh----cCCceEEEcCCcCHhHHHHHhcCCCCCEEEechHhcC
Confidence 899999999999999999999999999999999999987 6789999999999999999999999999999999999
Q ss_pred hH-HHHHHHHH
Q 039862 159 PE-FIDIIKSA 168 (173)
Q Consensus 159 ~~-f~~Ii~~~ 168 (173)
++ |.+||+.+
T Consensus 261 ~~~F~~Ii~~~ 271 (272)
T 4g1k_A 261 SGDFLAICRAA 271 (272)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhhc
Confidence 85 99999753
No 5
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=100.00 E-value=2.8e-69 Score=453.06 Aligned_cols=167 Identities=59% Similarity=1.018 Sum_probs=159.8
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..+.+++.+++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (249)
T 3th6_A 80 PGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVIACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSK 159 (249)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHTTTCHHHHHHHHHHHHHTTCSCGGG
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhchhhhcC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998877889
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++|||||+||||||++|+|++++++|.+||+++++.|+...++++||||||||+++|+.+++.++||||+|||||||+++
T Consensus 160 ~vIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~~ 239 (249)
T 3th6_A 160 VVIAYEPVWAIGTGKTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKPE 239 (249)
T ss_dssp EEEEECCTTTCCC---CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSTH
T ss_pred EEEEECCcchhcCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCccCHhHHHHHhcCCCCCEEEeehHhhhHH
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 039862 161 FIDIIKS 167 (173)
Q Consensus 161 f~~Ii~~ 167 (173)
|.+||+.
T Consensus 240 F~~ii~~ 246 (249)
T 3th6_A 240 FVQIINA 246 (249)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999964
No 6
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=100.00 E-value=3e-69 Score=453.97 Aligned_cols=168 Identities=47% Similarity=0.734 Sum_probs=160.2
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||...|.+++. +
T Consensus 83 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 162 (254)
T 3m9y_A 83 PVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQL 162 (254)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhcCCHHHh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998863 6
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|||++++++|.+||+++++.|+...++++||||||||+++|+.++++++||||+|||||||+
T Consensus 163 ~~vvIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~ 242 (254)
T 3m9y_A 163 KSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLK 242 (254)
T ss_dssp HHCEEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHHcCCCCCeEEeeHHhhC
Confidence 78999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hH-HHHHHHHH
Q 039862 159 PE-FIDIIKSA 168 (173)
Q Consensus 159 ~~-f~~Ii~~~ 168 (173)
++ |.+||+.+
T Consensus 243 ~~~F~~Ii~~~ 253 (254)
T 3m9y_A 243 VEDFVQLLEGA 253 (254)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 85 99999854
No 7
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-69 Score=456.66 Aligned_cols=168 Identities=49% Similarity=0.843 Sum_probs=163.5
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|+++..+++
T Consensus 103 ~~mLkd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Ql~~~l~~v~~~~~ 182 (271)
T 3krs_A 103 CEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQLTEALKDVSDLSN 182 (271)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCCTT
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHHHHHHHhchHhhcC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998877899
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++|||||+||||||++|+||+++++|++||+++++.|+.+.++++||||||||+++|+.+++.++||||+|||||||+++
T Consensus 183 ~vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASL~~~ 262 (271)
T 3krs_A 183 LVIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNELIKCADIDGFLVGGASLKPT 262 (271)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHHHHHSTTCCEEEESGGGGSTT
T ss_pred EEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHhcCCCCCEEEeeHHhhhHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999988
Q ss_pred HHHHHHHH
Q 039862 161 FIDIIKSA 168 (173)
Q Consensus 161 f~~Ii~~~ 168 (173)
|.+||+..
T Consensus 263 F~~Ii~~~ 270 (271)
T 3krs_A 263 FAKIIESA 270 (271)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999764
No 8
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=100.00 E-value=3.3e-69 Score=457.63 Aligned_cols=167 Identities=41% Similarity=0.652 Sum_probs=151.4
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhc-cCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK-ISNWD 79 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~-v~~~~ 79 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+.+|.+ .+. +
T Consensus 105 ~~mLkd~G~~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Ql~~~l~~~~~~-~ 183 (275)
T 3kxq_A 105 AFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATA-E 183 (275)
T ss_dssp HHHHHHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHSCTTCCT-T
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHHHHHHHcCCccc-C
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999975 223 7
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCCh
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 159 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~ 159 (173)
+++|||||+||||||++|+|++++++|.+||+++++.|+ ..++++||||||||||+|+.+|++++||||+|||||||++
T Consensus 184 ~vVIAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~-~~a~~~rIlYGGSV~~~Na~el~~~~dIDG~LVGgASL~~ 262 (275)
T 3kxq_A 184 NIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFG-DEGAKIRLLYGGSVKPSNAFELLSTAHVNGALIGGASLKA 262 (275)
T ss_dssp TEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHH-HHHTTSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSH
T ss_pred CEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhh-hhcccceEEEcCCcCHhHHHHHHcCCccceEEeehhhcCH
Confidence 899999999999999999999999999999999999987 6789999999999999999999999999999999999997
Q ss_pred H-HHHHHHHHh
Q 039862 160 E-FIDIIKSAT 169 (173)
Q Consensus 160 ~-f~~Ii~~~~ 169 (173)
+ |.+||+...
T Consensus 263 ~~F~~Ii~~~~ 273 (275)
T 3kxq_A 263 IDFLTICDVYR 273 (275)
T ss_dssp HHHHHHHGGGG
T ss_pred HHHHHHHHHHh
Confidence 5 999998654
No 9
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=100.00 E-value=9.3e-69 Score=450.09 Aligned_cols=168 Identities=45% Similarity=0.721 Sum_probs=162.2
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (250)
T 1yya_A 79 ARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGP 158 (250)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSG
T ss_pred HHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998863 6
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||++++++|+.++++++||||||||+++|+.++++++||||+|||||||+
T Consensus 159 ~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (250)
T 1yya_A 159 EALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLE 238 (250)
T ss_dssp GGCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHhC
Confidence 79999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred hH-HHHHHHHH
Q 039862 159 PE-FIDIIKSA 168 (173)
Q Consensus 159 ~~-f~~Ii~~~ 168 (173)
++ |.+|++..
T Consensus 239 a~~F~~ii~~~ 249 (250)
T 1yya_A 239 LESFLALLRIA 249 (250)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHhc
Confidence 76 99999853
No 10
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=100.00 E-value=1.1e-68 Score=451.06 Aligned_cols=171 Identities=51% Similarity=0.885 Sum_probs=163.8
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhcc-CC--
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI-SN-- 77 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v-~~-- 77 (173)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|++.+++.+||+..|+++ +.
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 160 (257)
T 2yc6_A 81 VEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKM 160 (257)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCChhh
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999988 53
Q ss_pred -CCCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeeccc
Q 039862 78 -WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 78 -~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~as 156 (173)
+++++|||||+||||||++|+||+++++|.+||++++++|+.++++++||||||||+++|+.++++++||||+||||||
T Consensus 161 ~~~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAs 240 (257)
T 2yc6_A 161 LWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGAS 240 (257)
T ss_dssp HHHTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGG
T ss_pred ccCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCCeeeecHHH
Confidence 5699999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhh
Q 039862 157 LKPEFIDIIKSATVK 171 (173)
Q Consensus 157 l~~~f~~Ii~~~~~~ 171 (173)
|+++|.+|++...++
T Consensus 241 L~a~F~~Ii~~~~~~ 255 (257)
T 2yc6_A 241 LKPEFMTMIDILTKT 255 (257)
T ss_dssp GSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 997799999976543
No 11
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=100.00 E-value=8.3e-69 Score=450.76 Aligned_cols=168 Identities=45% Similarity=0.747 Sum_probs=162.4
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (252)
T 2btm_A 79 PVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQV 158 (252)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998864 6
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+|++++++|++||++++++|+.++++++||||||||+++|+.++++++||||+|||||||+
T Consensus 159 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (252)
T 2btm_A 159 KQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLE 238 (252)
T ss_dssp TTCEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhC
Confidence 89999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred hH-HHHHHHHH
Q 039862 159 PE-FIDIIKSA 168 (173)
Q Consensus 159 ~~-f~~Ii~~~ 168 (173)
++ |.+|++..
T Consensus 239 a~~F~~Ii~~~ 249 (252)
T 2btm_A 239 PASFLQLVEAG 249 (252)
T ss_dssp HHHHHHHHHTT
T ss_pred hHHHHHHHHHH
Confidence 76 99999854
No 12
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=100.00 E-value=1.2e-68 Score=451.10 Aligned_cols=170 Identities=62% Similarity=1.008 Sum_probs=162.8
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+|++.++++++.+++
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (259)
T 2i9e_A 79 PAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSN 158 (259)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCSCCTT
T ss_pred HHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcchhhcC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999988866899
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++|||||+||||||++|+||+++++|.+||+++++.|+..+++++||||||||+++|+.+++.++||||+|||||||+++
T Consensus 159 ~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~ 238 (259)
T 2i9e_A 159 VVIAYEPVWAIGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANCKELASQPDIDGFLVGGASLKPE 238 (259)
T ss_dssp EEEEECCGGGTTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred EEEEEcCHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhHHHHhcCCCCCeeeechHhhChH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999976
Q ss_pred -HHHHHHHHhh
Q 039862 161 -FIDIIKSATV 170 (173)
Q Consensus 161 -f~~Ii~~~~~ 170 (173)
|..|++....
T Consensus 239 ~F~~Ii~~~~~ 249 (259)
T 2i9e_A 239 FVDIINARQLV 249 (259)
T ss_dssp HHHHHTTTC--
T ss_pred HHHHHHHHHHh
Confidence 9999986543
No 13
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=100.00 E-value=1.5e-68 Score=450.08 Aligned_cols=171 Identities=43% Similarity=0.699 Sum_probs=163.2
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 82 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 161 (256)
T 1aw2_A 82 PAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEAL 161 (256)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998863 7
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||+++++ ++.++++++||||||||+++|+.++++++||||+|||||||+
T Consensus 162 ~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 240 (256)
T 1aw2_A 162 EGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAE-KSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALD 240 (256)
T ss_dssp TTCEEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHT-TCHHHHHHCEEEECSCCCTTTHHHHTTSTTCCEEEESGGGGC
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeecHHHhC
Confidence 8999999999999999999999999999999999999 788778899999999999999999999999999999999999
Q ss_pred hH-HHHHHHHHhhhc
Q 039862 159 PE-FIDIIKSATVKK 172 (173)
Q Consensus 159 ~~-f~~Ii~~~~~~~ 172 (173)
++ |.+|++.....+
T Consensus 241 a~~F~~Ii~~~~~~~ 255 (256)
T 1aw2_A 241 AKSFAAIAKAAAEAK 255 (256)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhhhcc
Confidence 76 999999776543
No 14
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=100.00 E-value=1.7e-68 Score=448.11 Aligned_cols=167 Identities=53% Similarity=0.870 Sum_probs=161.3
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++.+++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (248)
T 1o5x_A 80 AEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDN 159 (248)
T ss_dssp HHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHTTGGGCCCTTS
T ss_pred HHHHHHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHHHHHhhhhhhcC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998855899
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++|||||+||||||++|+||+++++|++||++++++|+.++++++||||||||+++|+.++++++||||+|||||||+++
T Consensus 160 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~~~ 239 (248)
T 1o5x_A 160 VILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKES 239 (248)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGSTT
T ss_pred EEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHHHHH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999933
Q ss_pred HHHHHHH
Q 039862 161 FIDIIKS 167 (173)
Q Consensus 161 f~~Ii~~ 167 (173)
|.+|++.
T Consensus 240 F~~ii~~ 246 (248)
T 1o5x_A 240 FVDIIKS 246 (248)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999985
No 15
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00 E-value=1.5e-68 Score=448.37 Aligned_cols=166 Identities=66% Similarity=1.047 Sum_probs=160.8
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++.+++
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (248)
T 1r2r_A 80 PGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSK 159 (248)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGGG
T ss_pred HHHHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhhc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998855889
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++|||||+||||||++|+||+++++|++||+++++.|+..+++++||||||||+++|+.+++.++||||+|||||||+++
T Consensus 160 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~ 239 (248)
T 1r2r_A 160 VVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE 239 (248)
T ss_dssp EEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGSTH
T ss_pred eEEEEecHHhhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHHcCCCCCeeEechHHhChH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999976
Q ss_pred -HHHHHH
Q 039862 161 -FIDIIK 166 (173)
Q Consensus 161 -f~~Ii~ 166 (173)
|..|++
T Consensus 240 ~F~~ii~ 246 (248)
T 1r2r_A 240 FVDIINA 246 (248)
T ss_dssp HHHHHTS
T ss_pred HHHHHHh
Confidence 999985
No 16
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=100.00 E-value=1.8e-68 Score=449.36 Aligned_cols=168 Identities=48% Similarity=0.766 Sum_probs=161.6
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (255)
T 1tre_A 80 AAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAF 159 (255)
T ss_dssp HHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998863 7
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||+++++ |+.++++++||||||||+++|+.++++++||||+|||||||+
T Consensus 160 ~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (255)
T 1tre_A 160 EGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAK-VDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLK 238 (255)
T ss_dssp TTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGC
T ss_pred CcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcCcccEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhC
Confidence 8999999999999999999999999999999999999 988878899999999999999999999999999999999999
Q ss_pred hH-HHHHHHHHh
Q 039862 159 PE-FIDIIKSAT 169 (173)
Q Consensus 159 ~~-f~~Ii~~~~ 169 (173)
++ |.+|++...
T Consensus 239 a~~F~~Ii~~~~ 250 (255)
T 1tre_A 239 ADAFAVIVKAAE 250 (255)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 76 999998754
No 17
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=100.00 E-value=1.6e-68 Score=451.10 Aligned_cols=170 Identities=61% Similarity=0.966 Sum_probs=163.2
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 87 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 166 (261)
T 1m6j_A 87 VGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAW 166 (261)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHSCTGGG
T ss_pred HHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998853 6
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||+++++.|+.++++++||||||||+++|+.+++.++||||+|||||||+
T Consensus 167 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 246 (261)
T 1m6j_A 167 KNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLD 246 (261)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCCCCCeeEecHHHhC
Confidence 89999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hH-HHHHHHHHhh
Q 039862 159 PE-FIDIIKSATV 170 (173)
Q Consensus 159 ~~-f~~Ii~~~~~ 170 (173)
++ |.+|++...+
T Consensus 247 a~~F~~ii~~~~~ 259 (261)
T 1m6j_A 247 AAKFKTIINSVSE 259 (261)
T ss_dssp HHHHHHHHGGGGG
T ss_pred hHHHHHHHHHHHh
Confidence 76 9999987653
No 18
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=100.00 E-value=1.2e-68 Score=448.62 Aligned_cols=168 Identities=50% Similarity=0.882 Sum_probs=161.7
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++.+++
T Consensus 79 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 158 (247)
T 1ney_A 79 VDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTN 158 (247)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCCTT
T ss_pred HHHHHHcCCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhchhhhcC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999988866899
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++|||||+||||||++|+||+++++|++||++++++|+.++++++||||||||+++|+.+++.++||||+|||||||+++
T Consensus 159 ~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~~~ 238 (247)
T 1ney_A 159 VVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPE 238 (247)
T ss_dssp EEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGSTH
T ss_pred EEEEECChhhcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHHHH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999944
Q ss_pred HHHHHHHH
Q 039862 161 FIDIIKSA 168 (173)
Q Consensus 161 f~~Ii~~~ 168 (173)
|.+|++..
T Consensus 239 F~~Ii~~~ 246 (247)
T 1ney_A 239 FVDIINSR 246 (247)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHhc
Confidence 99999753
No 19
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00 E-value=4.8e-68 Score=450.53 Aligned_cols=168 Identities=54% Similarity=0.886 Sum_probs=162.6
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++.+++
T Consensus 99 ~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGEtleeReag~t~~vv~~Ql~~~l~~~~~~~~ 178 (275)
T 1mo0_A 99 PAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWEN 178 (275)
T ss_dssp HHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTTCCSTT
T ss_pred HHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHHHHHhhhhhhcC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998856899
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++|||||+||||||++|+||+++++|++||+++++.|+.++++++||||||||+++|+++++.++||||+|||||||+++
T Consensus 179 vvIAYEPvWAIGTGktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el~~~~diDG~LVGgASLka~ 258 (275)
T 1mo0_A 179 IVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPD 258 (275)
T ss_dssp EEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGSTH
T ss_pred EEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHHhcCCCCCeeEechHHhChH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999999976
Q ss_pred -HHHHHHHH
Q 039862 161 -FIDIIKSA 168 (173)
Q Consensus 161 -f~~Ii~~~ 168 (173)
|.+|++..
T Consensus 259 ~F~~Ii~~~ 267 (275)
T 1mo0_A 259 FVKIINARS 267 (275)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhh
Confidence 99999864
No 20
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=100.00 E-value=3.4e-68 Score=446.91 Aligned_cols=167 Identities=60% Similarity=1.003 Sum_probs=160.6
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 160 (251)
T 2vxn_A 81 MPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAW 160 (251)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGGG
T ss_pred HHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999988853 6
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||+++++.|+.++++++||||||||+++|+.+++.++||||+|||||||+
T Consensus 161 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 240 (251)
T 2vxn_A 161 NQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLK 240 (251)
T ss_dssp GGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH
Confidence 89999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 039862 159 PEFIDIIKS 167 (173)
Q Consensus 159 ~~f~~Ii~~ 167 (173)
++|.+|++.
T Consensus 241 ~~F~~Ii~~ 249 (251)
T 2vxn_A 241 PEFRDIIDA 249 (251)
T ss_dssp TTHHHHHHT
T ss_pred HHHHHHHHh
Confidence 339999974
No 21
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=100.00 E-value=2.8e-68 Score=447.16 Aligned_cols=167 Identities=59% Similarity=0.999 Sum_probs=160.8
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccC--CC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NW 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~--~~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++ .+
T Consensus 80 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 159 (250)
T 2j27_A 80 LPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADW 159 (250)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGG
T ss_pred HHHHHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHHHHhcCCHHHh
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999885 36
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||+++++.|+.++++++||||||||+++|+.++++++||||+|||||||+
T Consensus 160 ~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 239 (250)
T 2j27_A 160 AKVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLK 239 (250)
T ss_dssp GGEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHHHHHHHHcCCCCCeeeeehHHHH
Confidence 79999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 039862 159 PEFIDIIKS 167 (173)
Q Consensus 159 ~~f~~Ii~~ 167 (173)
++|.+|++.
T Consensus 240 ~~F~~ii~~ 248 (250)
T 2j27_A 240 PEFVDIIKA 248 (250)
T ss_dssp TTHHHHHHT
T ss_pred HHHHHHHHh
Confidence 339999975
No 22
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=100.00 E-value=2.4e-68 Score=448.46 Aligned_cols=168 Identities=49% Similarity=0.762 Sum_probs=160.5
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCC--C
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--W 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~--~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++|+|.+++.+||+..|++++. +
T Consensus 81 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~ 160 (255)
T 1b9b_A 81 PLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEA 160 (255)
T ss_dssp HHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999988753 5
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|++||++++++|+.++++++||||||||+++|+.++++++||||+|||||||+
T Consensus 161 ~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASLk 240 (255)
T 1b9b_A 161 KRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLK 240 (255)
T ss_dssp TTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSCCHHHHTTTSSSTTCCEEEESGGGTS
T ss_pred CCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCcCCHHHHHHHHcCCCCCeeEeehHhhc
Confidence 89999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hH---HHHHHHHH
Q 039862 159 PE---FIDIIKSA 168 (173)
Q Consensus 159 ~~---f~~Ii~~~ 168 (173)
++ |.+|++.+
T Consensus 241 a~~~~F~~ii~~~ 253 (255)
T 1b9b_A 241 ESFIELARIMRGV 253 (255)
T ss_dssp THHHHHHHHHTC-
T ss_pred CccccHHHHHHHH
Confidence 64 99998743
No 23
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=100.00 E-value=5e-65 Score=423.67 Aligned_cols=156 Identities=40% Similarity=0.681 Sum_probs=145.9
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcC--ChHHHHHHHHHHHHhccCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESG--STVAVVAEQTKAIAEKISNW 78 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~--~~~~~l~~Ql~~~l~~v~~~ 78 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|++| +|.+++.+||+. +. .+ +
T Consensus 74 ~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~-l~-~~-~ 150 (233)
T 2jgq_A 74 SKHLEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLEN-ID-LN-Y 150 (233)
T ss_dssp HHHHHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTT-SC-TT-C
T ss_pred HHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHh-hh-hh-c
Confidence 5799999999999999999999999999999999999999999999999999999999 999999999998 33 23 7
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++++|||||+||||||++|+||+++++|.+||++++ +++||||||||+++|+.+++.++||||+|||||||+
T Consensus 151 ~~~vIAYEPvWAIGTG~~At~e~a~ev~~~IR~~l~--------~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~ 222 (233)
T 2jgq_A 151 PNLVVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN--------QKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWE 222 (233)
T ss_dssp TTEEEEECCGGGTTC--CCCHHHHHHHHHHHHHHSC--------TTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred cceEEEEeCHHHhCCCCCCCHHHHHHHHHHHHHHHh--------cCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhC
Confidence 899999999999999999999999999999999864 469999999999999999999999999999999999
Q ss_pred hH-HHHHHHH
Q 039862 159 PE-FIDIIKS 167 (173)
Q Consensus 159 ~~-f~~Ii~~ 167 (173)
++ |.+|++.
T Consensus 223 a~~f~~ii~~ 232 (233)
T 2jgq_A 223 LENFKTIISF 232 (233)
T ss_dssp HHHHHHHHTT
T ss_pred hHHHHHHHHh
Confidence 76 9999864
No 24
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=100.00 E-value=9.9e-65 Score=435.49 Aligned_cols=169 Identities=28% Similarity=0.439 Sum_probs=155.6
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHh-----cCChHHHHHHHHHHHHhcc
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRE-----SGSTVAVVAEQTKAIAEKI 75 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~-----~~~~~~~l~~Ql~~~l~~v 75 (173)
|+||+|+||+||||||||||++|+|||+.|++|+++|+++||+||+||||++++|+ +|++.+++.+||+..|+++
T Consensus 133 a~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~~g~t~~vv~~Ql~~~l~~l 212 (310)
T 3s6d_A 133 PVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEAIGRAVGECEAQIRPVLEAL 212 (310)
T ss_dssp HHHHHHTTCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccccccHHHHHHHHHHHHHhcC
Confidence 57999999999999999999999999999999999999999999999999999999 9999999999999999998
Q ss_pred CCCCCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 76 SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 76 ~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
+...+++|||||+||||||++|+||+++++|++||+++++.|+ ..++++||||||||+++|+.+++-++||||+|||||
T Consensus 213 ~~~~~vVIAYEPVWAIGTGk~Atpe~aqevh~~IR~~l~~~~~-~~a~~vrILYGGSV~~~n~~~~~l~~dVDG~LVGgA 291 (310)
T 3s6d_A 213 PRDAPVIFAYEPVWAIGKPQPARVDHVGAVVSGIRSVIERIDR-HRKGEVRILYGGSAGPGLWGPGGLGKEVDGMFLGRF 291 (310)
T ss_dssp CTTSCEEEEECCGGGC-----CCHHHHHHHHHHHHHHHHHHHT-TCSSCEEEEEEEEECTTTTTTTSGGGTCSEEEECGG
T ss_pred CcccceEEEECChhhccCCCCCCHHHHHHHHHHHHHHHHHhhh-cccCceeEEEcCccCHHHHhhhcccCCCCEEEeehe
Confidence 8778999999999999999999999999999999999999986 457899999999999999999655699999999999
Q ss_pred cCChH-HHHHHHHHhh
Q 039862 156 SLKPE-FIDIIKSATV 170 (173)
Q Consensus 156 sl~~~-f~~Ii~~~~~ 170 (173)
||+++ |.+|++.+..
T Consensus 292 SL~a~~F~~Ii~e~~~ 307 (310)
T 3s6d_A 292 AHDIEGVRKVVREVEE 307 (310)
T ss_dssp GGSHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHH
Confidence 99976 9999998753
No 25
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=100.00 E-value=1e-43 Score=294.09 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=125.0
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
+.||+++||+|||+||||||.+|+| +++|++.|+++||+||+||||+++++ .+.. ..+
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~---------------~~~~---~~~ 138 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILAD----LEAAIRRAEEVGLMTMVCSNNPAVSA---------------AVAA---LNP 138 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHH----HHHHHHHHHHHTCEEEEEESSHHHHH---------------HHHT---TCC
T ss_pred HHHHHHcCCCEEEECcchhcCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHH---------------HHhc---CCC
Confidence 3699999999999999999999987 78999999999999999999998762 1222 346
Q ss_pred eEEEEcccccccCC---CCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 81 VVLAYEPVWAIGTG---KVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 81 iiIAYEPvwAIGtG---~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
.+|||||+|||||| ++++|++++++|+.||.+ ..+++|||||||++.|+.+++.++|+||+|||+|+|
T Consensus 139 ~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~---------~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l 209 (225)
T 1hg3_A 139 DYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKV---------NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVT 209 (225)
T ss_dssp SEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHH---------CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhc---------cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHH
Confidence 79999999999999 899999999999999986 346999999999999999999999999999999999
Q ss_pred ChH-HHHHHHHHhh
Q 039862 158 KPE-FIDIIKSATV 170 (173)
Q Consensus 158 ~~~-f~~Ii~~~~~ 170 (173)
+++ |.++++.+..
T Consensus 210 ~a~~~~~~i~~l~~ 223 (225)
T 1hg3_A 210 KAKDPEKAIWDLVS 223 (225)
T ss_dssp TCSSHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHh
Confidence 965 9999987643
No 26
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=100.00 E-value=1.3e-43 Score=293.76 Aligned_cols=139 Identities=25% Similarity=0.265 Sum_probs=124.6
Q ss_pred CcchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 1 AEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 1 a~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
+.||+++||+|||+||||||.+|+| +++|++.|+++||+||+||||+++++ .+.. ..+
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e----~~~k~~~A~~~GL~~ivcVge~~e~~---------------~~~~---~~~ 135 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLND----LARLVAKAKSLGLDVVVCAPDPRTSL---------------AAAA---LGP 135 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHH----HHHHHHHHHHTTCEEEEEESSHHHHH---------------HHHH---TCC
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHH----HHHHHHHHHHCCCEEEEEeCCHHHHH---------------HHhc---CCC
Confidence 3699999999999999999999987 78999999999999999999998762 1222 346
Q ss_pred eEEEEcccccccCC---CCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 81 VVLAYEPVWAIGTG---KVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 81 iiIAYEPvwAIGtG---~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
.+|||||+|||||| ++++|++++++|+.||.+ ..++++||||||++.|+.+++.++|+||+|||+|+|
T Consensus 136 ~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~---------~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l 206 (226)
T 1w0m_A 136 HAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRH---------FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAV 206 (226)
T ss_dssp SEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHH---------CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhc---------cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHH
Confidence 79999999999999 789999999999999986 346999999999999999999999999999999999
Q ss_pred ChH-HHHHHHHHhh
Q 039862 158 KPE-FIDIIKSATV 170 (173)
Q Consensus 158 ~~~-f~~Ii~~~~~ 170 (173)
+++ |.++++.+..
T Consensus 207 ~a~~~~~~i~~l~~ 220 (226)
T 1w0m_A 207 KAKDPYAKIVELAK 220 (226)
T ss_dssp TCSSHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHH
Confidence 965 9999987643
No 27
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=3.1e-32 Score=223.09 Aligned_cols=137 Identities=19% Similarity=0.327 Sum_probs=109.8
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
.|++++||++|++||||||..++| ++++++.|.++||.||+||+++.+.. .+.. ....
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e----~~~~~~~a~~~Gl~~iv~v~~~~e~~---------------~~~~---~~~~ 133 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLAD----IEAVINKCKNLGLETIVCTNNINTSK---------------AVAA---LSPD 133 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHH----HHHHHHHHHHHTCEEEEEESSSHHHH---------------HHTT---TCCS
T ss_pred HHHHHcCCCEEEECCccccCCHHH----HHHHHHHHHHCCCeEEEEeCCchHHH---------------HHHh---CCCC
Confidence 689999999999999999999866 67889999999999999999997642 1222 3457
Q ss_pred EEEEcccccccCC---CCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 82 VLAYEPVWAIGTG---KVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 82 iIAYEPvwAIGtG---~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
+|+|||+|+|||| +++++++++.+++.+|+. ..++||+|||||++.|..+.+...++||+|||+|+++
T Consensus 134 ~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~---------~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 134 CIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEI---------NKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVK 204 (219)
T ss_dssp EEEECCCC--------------CSHHHHHHHHHH---------CTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHT
T ss_pred EEEEEeccccccCCCCccCCHHHHHHHHHHHHhc---------cCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhC
Confidence 9999999999999 899999899999999986 2369999999999999999999999999999999999
Q ss_pred hH-HHHHHHHHh
Q 039862 159 PE-FIDIIKSAT 169 (173)
Q Consensus 159 ~~-f~~Ii~~~~ 169 (173)
++ |.++++.+.
T Consensus 205 ~~d~~~~~~~l~ 216 (219)
T 2h6r_A 205 AKNVEEAIRELI 216 (219)
T ss_dssp CSSHHHHHHHHC
T ss_pred cccHHHHHHHHH
Confidence 65 999998764
No 28
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=99.17 E-value=5.8e-11 Score=100.85 Aligned_cols=129 Identities=15% Similarity=0.102 Sum_probs=87.3
Q ss_pred cchhhcCCCEEEEccc--------------ccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHS--------------ERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQ 67 (173)
Q Consensus 2 ~mLkd~G~~~viiGHS--------------ERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Q 67 (173)
+.||++|+..| +||| |+|.-|.+-.+. +++|.+.||..+.|+-...+.+
T Consensus 115 e~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~----I~~A~~~gL~Ti~~v~~~eeA~------------ 177 (286)
T 2p10_A 115 RELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEM----IAEAHKLDLLTTPYVFSPEDAV------------ 177 (286)
T ss_dssp HHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHH----HHHHHHTTCEECCEECSHHHHH------------
T ss_pred HHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHH----HHHHHHCCCeEEEecCCHHHHH------------
Confidence 47999999999 9999 999988666555 7999999999999999876543
Q ss_pred HHHHHhccCCCCCeEEEEccc----ccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEE-cCCCCc-ccHHHH
Q 039862 68 TKAIAEKISNWDNVVLAYEPV----WAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIY-GGSVNG-ANCKEL 141 (173)
Q Consensus 68 l~~~l~~v~~~~~iiIAYEPv----wAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilY-GGSV~~-~n~~~~ 141 (173)
.+.. ..+.+|+.||. -.||+|.+.|.++..+.++.+.+..++. ..++.+|. ||.|+. +.+...
T Consensus 178 --amA~----agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~v-----npdvivLc~gGpIstpeDv~~~ 246 (286)
T 2p10_A 178 --AMAK----AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTI-----RDDIIILSHGGPIANPEDARFI 246 (286)
T ss_dssp --HHHH----HTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHH-----CSCCEEEEESTTCCSHHHHHHH
T ss_pred --HHHH----cCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHh-----CCCcEEEecCCCCCCHHHHHHH
Confidence 2221 45789999999 5999998877655333333333333332 45677664 547755 555555
Q ss_pred hc-CCCCCEEEeecccCC
Q 039862 142 AA-QPDVDGFLVGGASLK 158 (173)
Q Consensus 142 ~~-~~~vDG~LiG~asl~ 158 (173)
+. .+++||++.+++-.+
T Consensus 247 l~~t~G~~G~~gASsier 264 (286)
T 2p10_A 247 LDSCQGCHGFYGASSMER 264 (286)
T ss_dssp HHHCTTCCEEEESHHHHH
T ss_pred HhcCCCccEEEeehhhhc
Confidence 55 337999999988766
No 29
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.18 E-value=6.7e-06 Score=69.12 Aligned_cols=121 Identities=14% Similarity=0.170 Sum_probs=83.4
Q ss_pred chhh--cCCCEEEE-cccccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCCHHHHhcCChHHHHHHHHHHHHhccCCC
Q 039862 3 MLVN--LSIPWVIL-GHSERRALLNESNDFVGDKVAYALSRGLKVI-ACVGETLEQRESGSTVAVVAEQTKAIAEKISNW 78 (173)
Q Consensus 3 mLkd--~G~~~vii-GHSERR~~~~E~~~~i~~Kv~~al~~gl~pI-lCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~ 78 (173)
|-++ .|.+|+=+ =|+|+|.++.+..+.+ +..+...+.|++++ +|+......+ .+.. .
T Consensus 95 lare~~~~~~~iKlEv~~d~~~llpD~~~tv-~aa~~L~~~Gf~Vlpy~~dd~~~ak---------------rl~~---~ 155 (265)
T 1wv2_A 95 LARELLDGHNLVKLEVLADQKTLFPNVVETL-KAAEQLVKDGFDVMVYTSDDPIIAR---------------QLAE---I 155 (265)
T ss_dssp HHHTTTTSCCEEEECCBSCTTTCCBCHHHHH-HHHHHHHTTTCEEEEEECSCHHHHH---------------HHHH---S
T ss_pred HHHHHcCCCCeEEEEeecCccccCcCHHHHH-HHHHHHHHCCCEEEEEeCCCHHHHH---------------HHHH---h
Confidence 3444 35556533 4899999998888765 66777778899999 8999865432 2222 3
Q ss_pred CCeEEEEcc-cccccCCCCC-CHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeeccc
Q 039862 79 DNVVLAYEP-VWAIGTGKVA-TPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 79 ~~iiIAYEP-vwAIGtG~~a-~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~as 156 (173)
...+| +| .-.||||... +++.++. |++. .++||+.+|+|........+-+.|.||||||++-
T Consensus 156 G~~aV--mPlg~pIGsG~Gi~~~~lI~~----I~e~----------~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI 219 (265)
T 1wv2_A 156 GCIAV--MPLAGLIGSGLGICNPYNLRI----ILEE----------AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAI 219 (265)
T ss_dssp CCSEE--EECSSSTTCCCCCSCHHHHHH----HHHH----------CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred CCCEE--EeCCccCCCCCCcCCHHHHHH----HHhc----------CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 45555 77 3449999764 6666633 3321 2589999999987665555555799999999977
Q ss_pred CC
Q 039862 157 LK 158 (173)
Q Consensus 157 l~ 158 (173)
.+
T Consensus 220 ~~ 221 (265)
T 1wv2_A 220 AH 221 (265)
T ss_dssp HT
T ss_pred hC
Confidence 65
No 30
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.07 E-value=7.7e-06 Score=68.29 Aligned_cols=118 Identities=22% Similarity=0.299 Sum_probs=78.8
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEE-EeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIA-CVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIl-CvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
+.++++|++.+|+-+ .-+.|..+. ...+.++|+.+|+ |.-.+.++| ++.+.+ ..+
T Consensus 110 ~~~~~aGvdG~IipD----LP~eE~~~~----~~~~~~~Gl~~I~lvaP~t~~eR------------i~~ia~----~a~ 165 (252)
T 3tha_A 110 KKAKSLGICALIVPE----LSFEESDDL----IKECERYNIALITLVSVTTPKER------------VKKLVK----HAK 165 (252)
T ss_dssp HHHHHTTEEEEECTT----CCGGGCHHH----HHHHHHTTCEECEEEETTSCHHH------------HHHHHT----TCC
T ss_pred HHHHHcCCCEEEeCC----CCHHHHHHH----HHHHHHcCCeEEEEeCCCCcHHH------------HHHHHH----hCC
Confidence 467899999999999 345676665 5788899999887 666554443 223322 334
Q ss_pred eEEEEccccccc-CCCC-CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC
Q 039862 81 VVLAYEPVWAIG-TGKV-ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 81 iiIAYEPvwAIG-tG~~-a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
-+|-|-+ ..| ||.. ..++.+.+.++.||+. .++|+++|++| ++++++++.. ..||+.||+|-.
T Consensus 166 gFiY~Vs--~~GvTG~~~~~~~~~~~~v~~vr~~----------~~~Pv~vGfGIst~e~a~~~~~--~ADGVIVGSAiV 231 (252)
T 3tha_A 166 GFIYLLA--SIGITGTKSVEEAILQDKVKEIRSF----------TNLPIFVGFGIQNNQDVKRMRK--VADGVIVGTSIV 231 (252)
T ss_dssp SCEEEEC--CSCSSSCSHHHHHHHHHHHHHHHTT----------CCSCEEEESSCCSHHHHHHHTT--TSSEEEECHHHH
T ss_pred CeEEEEe--cCCCCCcccCCCHHHHHHHHHHHHh----------cCCcEEEEcCcCCHHHHHHHHh--cCCEEEECHHHH
Confidence 4565644 445 5654 2234455555555543 25899999999 6677777664 599999999844
No 31
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.90 E-value=1.6e-05 Score=67.00 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=73.4
Q ss_pred ccccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEcc-cccccC
Q 039862 16 HSERRALLNESNDFVGDKVAYALSRGLKVI-ACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEP-VWAIGT 93 (173)
Q Consensus 16 HSERR~~~~E~~~~i~~Kv~~al~~gl~pI-lCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEP-vwAIGt 93 (173)
|+|+|.++.+..+.+ ++.+...+.|++++ +|...... .+.+.. ....+| +| .-.|||
T Consensus 100 i~d~~~l~pD~~~tv-~aa~~L~k~Gf~Vlpy~~~D~~~-----------ak~l~~-------~G~~aV--mPlg~pIGs 158 (268)
T 2htm_A 100 IPDPTYLLPDPLETL-KAAERLIEEDFLVLPYMGPDLVL-----------AKRLAA-------LGTATV--MPLAAPIGS 158 (268)
T ss_dssp CSCTTTTCCCHHHHH-HHHHHHHHTTCEECCEECSCHHH-----------HHHHHH-------HTCSCB--EEBSSSTTT
T ss_pred ccCccccCcCHHHHH-HHHHHHHHCCCEEeeccCCCHHH-----------HHHHHh-------cCCCEE--EecCccCcC
Confidence 788888776666554 66777778899999 89744321 222222 234444 88 444999
Q ss_pred CCCC-CHHHHHHHHHHHHHHHHhccchhhcCc-ceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 94 GKVA-TPAQAQEVHAELRKWLKDNVSAEVAAS-TRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 94 G~~a-~~e~i~~~~~~Ir~~~~~~~~~~~~~~-i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
|+.. +|+.++. |++. ..+ +||+.+|+|........+-+.|.||||||++-.+
T Consensus 159 G~Gi~~~~~L~~----i~~~---------~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 159 GWGVRTRALLEL----FARE---------KASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp CCCSTTHHHHHH----HHHT---------TTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHT
T ss_pred CcccCCHHHHHH----HHHh---------cCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 9875 5555333 3321 124 8999999998877666666799999999997776
No 32
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.89 E-value=5.2e-05 Score=63.70 Aligned_cols=118 Identities=19% Similarity=0.226 Sum_probs=74.0
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVI-ACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pI-lCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
+.++++|++.+|+. -.-+.|..+. .+.+.++|+.+| +|.-.+..+| ++.+.+. ..
T Consensus 119 ~~~~~aGvdGvIip----Dlp~ee~~~~----~~~~~~~gl~~I~lvap~t~~er------------i~~i~~~----~~ 174 (271)
T 3nav_A 119 QRCQKAGVDSVLIA----DVPTNESQPF----VAAAEKFGIQPIFIAPPTASDET------------LRAVAQL----GK 174 (271)
T ss_dssp HHHHHHTCCEEEET----TSCGGGCHHH----HHHHHHTTCEEEEEECTTCCHHH------------HHHHHHH----CC
T ss_pred HHHHHCCCCEEEEC----CCCHHHHHHH----HHHHHHcCCeEEEEECCCCCHHH------------HHHHHHH----CC
Confidence 46789999999995 3334566555 678899999987 6655554333 2223221 22
Q ss_pred eEEEEccccccc-CCCC-CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeeccc
Q 039862 81 VVLAYEPVWAIG-TGKV-ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 81 iiIAYEPvwAIG-tG~~-a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~as 156 (173)
-+|.|-. ..| ||.. ..++.+.+.++.||+. .++|++.|++|+ ++++++.+. .+.||+.||+|-
T Consensus 175 gfiY~vs--~~GvTG~~~~~~~~~~~~v~~vr~~----------~~~Pv~vGfGIst~e~~~~~~~-~gADgvIVGSAi 240 (271)
T 3nav_A 175 GYTYLLS--RAGVTGAETKANMPVHALLERLQQF----------DAPPALLGFGISEPAQVKQAIE-AGAAGAISGSAV 240 (271)
T ss_dssp SCEEECC--CC--------CCHHHHHHHHHHHHT----------TCCCEEECSSCCSHHHHHHHHH-TTCSEEEESHHH
T ss_pred CeEEEEe--ccCCCCcccCCchhHHHHHHHHHHh----------cCCCEEEECCCCCHHHHHHHHH-cCCCEEEECHHH
Confidence 3344433 445 5554 2356677777777764 258999999995 777764444 679999999984
No 33
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.86 E-value=0.0001 Score=59.94 Aligned_cols=126 Identities=13% Similarity=0.114 Sum_probs=77.9
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEe--CCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACV--GETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCv--GE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
++..++|++++.++ .|.= ..+...+-++.+.+.|+.+.+-+ ..+.+. ++..+.+.+
T Consensus 79 ~~~~~aGadgv~vh-~e~~-----~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~-------------~~~~~~~~D--- 136 (230)
T 1tqj_A 79 EDFAKAGADIISVH-VEHN-----ASPHLHRTLCQIRELGKKAGAVLNPSTPLDF-------------LEYVLPVCD--- 136 (230)
T ss_dssp HHHHHHTCSEEEEE-CSTT-----TCTTHHHHHHHHHHTTCEEEEEECTTCCGGG-------------GTTTGGGCS---
T ss_pred HHHHHcCCCEEEEC-cccc-----cchhHHHHHHHHHHcCCcEEEEEeCCCcHHH-------------HHHHHhcCC---
Confidence 35678899999886 2200 11234455788889999999988 333221 112233222
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
+|.+=|++..-+|....+...+ -++.+|+...+. +-++||.-+|+|+++|+.++.. .+.||+-+|++-++
T Consensus 137 --~v~~msv~pg~ggq~~~~~~~~-~i~~lr~~~~~~-----~~~~~I~v~GGI~~~~~~~~~~-aGad~vvvGSai~~ 206 (230)
T 1tqj_A 137 --LILIMSVNPGFGGQSFIPEVLP-KIRALRQMCDER-----GLDPWIEVDGGLKPNNTWQVLE-AGANAIVAGSAVFN 206 (230)
T ss_dssp --EEEEESSCC----CCCCGGGHH-HHHHHHHHHHHH-----TCCCEEEEESSCCTTTTHHHHH-HTCCEEEESHHHHT
T ss_pred --EEEEEEeccccCCccCcHHHHH-HHHHHHHHHHhc-----CCCCcEEEECCcCHHHHHHHHH-cCCCEEEECHHHHC
Confidence 5545566655445554443333 345566654321 2368999999999999998865 68999999998775
No 34
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.75 E-value=0.00042 Score=58.24 Aligned_cols=117 Identities=10% Similarity=0.162 Sum_probs=77.0
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeE
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVV 82 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ii 82 (173)
.++++|++.|+++|+=. +++.+..=+..|.+.||.+++|+-...| +..++. ...-+
T Consensus 137 ea~~~GAD~VlLi~a~L------~~~~l~~l~~~a~~lGl~~lvevh~~eE--------------l~~A~~----~ga~i 192 (272)
T 3tsm_A 137 EARSWGADCILIIMASV------DDDLAKELEDTAFALGMDALIEVHDEAE--------------MERALK----LSSRL 192 (272)
T ss_dssp HHHHTTCSEEEEETTTS------CHHHHHHHHHHHHHTTCEEEEEECSHHH--------------HHHHTT----SCCSE
T ss_pred HHHHcCCCEEEEccccc------CHHHHHHHHHHHHHcCCeEEEEeCCHHH--------------HHHHHh----cCCCE
Confidence 46789999999999943 3566777788899999999999965432 223332 23335
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 83 LAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 83 IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
|..-+.-.- ....+.+...+....+ ..+++++.+|+| +++++..+. ..|+||+|||++-+.
T Consensus 193 IGinnr~l~--t~~~dl~~~~~L~~~i------------p~~~~vIaesGI~t~edv~~l~-~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 193 LGVNNRNLR--SFEVNLAVSERLAKMA------------PSDRLLVGESGIFTHEDCLRLE-KSGIGTFLIGESLMR 254 (272)
T ss_dssp EEEECBCTT--TCCBCTHHHHHHHHHS------------CTTSEEEEESSCCSHHHHHHHH-TTTCCEEEECHHHHT
T ss_pred EEECCCCCc--cCCCChHHHHHHHHhC------------CCCCcEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHcC
Confidence 555544221 1123444433322221 235899999999 666665554 589999999998776
No 35
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.74 E-value=0.00021 Score=57.46 Aligned_cols=122 Identities=14% Similarity=0.122 Sum_probs=78.0
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHh---ccCCCC
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE---KISNWD 79 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~---~v~~~~ 79 (173)
+..++|++++.+ |.|- ..+. +..-++.+.+.|+.+++-+..+... ++++..+. +.
T Consensus 82 ~~~~agad~v~v-H~~~---~~~~---~~~~~~~i~~~g~~igv~~~p~t~~-----------e~~~~~~~~~~~~---- 139 (228)
T 1h1y_A 82 PLAKAGASGFTF-HIEV---SRDN---WQELIQSIKAKGMRPGVSLRPGTPV-----------EEVFPLVEAENPV---- 139 (228)
T ss_dssp HHHHHTCSEEEE-EGGG---CTTT---HHHHHHHHHHTTCEEEEEECTTSCG-----------GGGHHHHHSSSCC----
T ss_pred HHHHcCCCEEEE-CCCC---cccH---HHHHHHHHHHcCCCEEEEEeCCCCH-----------HHHHHHHhcCCCC----
Confidence 455688888865 3332 1122 1334566678899998888422110 11223333 32
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
-+|.+=|++..++|....++..+. ++.+|+.. .++||.-+|+|+++|+.++.. .++|++-+|++-.+
T Consensus 140 -d~vl~~sv~pg~~g~~~~~~~l~~-i~~~~~~~---------~~~pi~v~GGI~~~ni~~~~~-aGaD~vvvGsai~~ 206 (228)
T 1h1y_A 140 -ELVLVMTVEPGFGGQKFMPEMMEK-VRALRKKY---------PSLDIEVDGGLGPSTIDVAAS-AGANCIVAGSSIFG 206 (228)
T ss_dssp -SEEEEESSCTTCSSCCCCGGGHHH-HHHHHHHC---------TTSEEEEESSCSTTTHHHHHH-HTCCEEEESHHHHT
T ss_pred -CEEEEEeecCCCCcccCCHHHHHH-HHHHHHhc---------CCCCEEEECCcCHHHHHHHHH-cCCCEEEECHHHHC
Confidence 256676777677777766665554 45556542 258999999999999988876 48999999998765
No 36
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.74 E-value=0.00042 Score=54.43 Aligned_cols=120 Identities=15% Similarity=0.139 Sum_probs=71.1
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
+.++++|++++++ |.+- ..+.+..=++.+.+.|+.+++- ++-+ + ..+++..++.. .-
T Consensus 71 ~~~~~~Gad~v~v-~~~~------~~~~~~~~~~~~~~~g~~~~v~~~~~~--------t---~~~~~~~~~~~----g~ 128 (211)
T 3f4w_A 71 QLLFDAGADYVTV-LGVT------DVLTIQSCIRAAKEAGKQVVVDMICVD--------D---LPARVRLLEEA----GA 128 (211)
T ss_dssp HHHHHTTCSEEEE-ETTS------CHHHHHHHHHHHHHHTCEEEEECTTCS--------S---HHHHHHHHHHH----TC
T ss_pred HHHHhcCCCEEEE-eCCC------ChhHHHHHHHHHHHcCCeEEEEecCCC--------C---HHHHHHHHHHc----CC
Confidence 4578899999999 6653 1233444466777789998862 3321 1 11233333331 11
Q ss_pred eEEEEcccccccCCCC-CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 81 VVLAYEPVWAIGTGKV-ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~-a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
-+|.+.|-.. |.... .+++. ++.+|+. + .++|++.+|+|+++|+.+++. .++||+.||++-++
T Consensus 129 d~i~v~~g~~-g~~~~~~~~~~----i~~l~~~----~-----~~~~i~~~gGI~~~~~~~~~~-~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 129 DMLAVHTGTD-QQAAGRKPIDD----LITMLKV----R-----RKARIAVAGGISSQTVKDYAL-LGPDVVIVGSAITH 192 (211)
T ss_dssp CEEEEECCHH-HHHTTCCSHHH----HHHHHHH----C-----SSCEEEEESSCCTTTHHHHHT-TCCSEEEECHHHHT
T ss_pred CEEEEcCCCc-ccccCCCCHHH----HHHHHHH----c-----CCCcEEEECCCCHHHHHHHHH-cCCCEEEECHHHcC
Confidence 2355555321 11111 12333 3334433 1 258999999999999988886 68999999997664
No 37
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.74 E-value=0.00021 Score=59.83 Aligned_cols=119 Identities=15% Similarity=0.169 Sum_probs=72.3
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVI-ACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pI-lCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
+.++++|++.+++. -.-+.|..+. .+.+.++|+.+| +|.-.|..+| ++.+.+. ..
T Consensus 117 ~~~~~aGvdgvii~----Dlp~ee~~~~----~~~~~~~gl~~i~liaP~t~~er------------i~~i~~~----~~ 172 (267)
T 3vnd_A 117 TKAQAAGVDSVLIA----DVPVEESAPF----SKAAKAHGIAPIFIAPPNADADT------------LKMVSEQ----GE 172 (267)
T ss_dssp HHHHHHTCCEEEET----TSCGGGCHHH----HHHHHHTTCEEECEECTTCCHHH------------HHHHHHH----CC
T ss_pred HHHHHcCCCEEEeC----CCCHhhHHHH----HHHHHHcCCeEEEEECCCCCHHH------------HHHHHHh----CC
Confidence 46789999999994 2334566555 678889999988 6655554332 3333332 12
Q ss_pred eEEEEcccccccCCCCC-CHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeeccc
Q 039862 81 VVLAYEPVWAIGTGKVA-TPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a-~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~as 156 (173)
-+| |=..-.-.||... .++.+.+.++.+|+. .++|+++||+|+ ++++++.+. .+.||+.||+|-
T Consensus 173 gfv-Y~vS~~GvTG~~~~~~~~~~~~v~~vr~~----------~~~pv~vGfGI~~~e~~~~~~~-~gADgvVVGSai 238 (267)
T 3vnd_A 173 GYT-YLLSRAGVTGTESKAGEPIENILTQLAEF----------NAPPPLLGFGIAEPEQVRAAIK-AGAAGAISGSAV 238 (267)
T ss_dssp SCE-EESCCCCCC--------CHHHHHHHHHTT----------TCCCEEECSSCCSHHHHHHHHH-TTCSEEEECHHH
T ss_pred CcE-EEEecCCCCCCccCCcHHHHHHHHHHHHh----------cCCCEEEECCcCCHHHHHHHHH-cCCCEEEECHHH
Confidence 233 4333333366652 344556666666653 258999999996 777764444 689999999973
No 38
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.69 E-value=0.00011 Score=60.76 Aligned_cols=118 Identities=15% Similarity=0.065 Sum_probs=80.1
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeE
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVV 82 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ii 82 (173)
.++++|++.|++|++-.. +.+.+=+..+.+.||.+++|+-...|. ..++. ...-+
T Consensus 123 ~a~~~GAD~VlL~~~~l~-------~~l~~l~~~a~~lGl~~lvev~~~~E~--------------~~a~~----~gad~ 177 (254)
T 1vc4_A 123 EARAFGASAALLIVALLG-------ELTGAYLEEARRLGLEALVEVHTEREL--------------EIALE----AGAEV 177 (254)
T ss_dssp HHHHTTCSEEEEEHHHHG-------GGHHHHHHHHHHHTCEEEEEECSHHHH--------------HHHHH----HTCSE
T ss_pred HHHHcCCCEEEECccchH-------HHHHHHHHHHHHCCCeEEEEECCHHHH--------------HHHHH----cCCCE
Confidence 467899999999999442 234445677778899999999865432 22332 12357
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 83 LAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 83 IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
|...|+... ...++++...++...+... +.+++++-.|+|+ ++++..+.. ++||++||++-+.
T Consensus 178 IGvn~~~l~--~~~~dl~~~~~L~~~i~~~---------~~~~~vIAegGI~s~~dv~~l~~--Ga~gvlVGsAl~~ 241 (254)
T 1vc4_A 178 LGINNRDLA--TLHINLETAPRLGRLARKR---------GFGGVLVAESGYSRKEELKALEG--LFDAVLIGTSLMR 241 (254)
T ss_dssp EEEESBCTT--TCCBCTTHHHHHHHHHHHT---------TCCSEEEEESCCCSHHHHHTTTT--TCSEEEECHHHHT
T ss_pred EEEccccCc--CCCCCHHHHHHHHHhCccc---------cCCCeEEEEcCCCCHHHHHHHHc--CCCEEEEeHHHcC
Confidence 888888754 3344555544444333210 1158899999998 888777776 9999999998765
No 39
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.60 E-value=0.00057 Score=55.01 Aligned_cols=120 Identities=13% Similarity=0.175 Sum_probs=69.5
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
+.+.+.|+++++++ .+- . + ....=++.+.+.|+.+++++.-+ ...+.+ +......+ .
T Consensus 102 ~~~~~~Gad~v~~~-~~~---~-~---~~~~~~~~~~~~g~~~~~~i~~~-------t~~e~~----~~~~~~~d---~- 158 (248)
T 1geq_A 102 AEAKASGVDGILVV-DLP---V-F---HAKEFTEIAREEGIKTVFLAAPN-------TPDERL----KVIDDMTT---G- 158 (248)
T ss_dssp HHHHHHTCCEEEET-TCC---G-G---GHHHHHHHHHHHTCEEEEEECTT-------CCHHHH----HHHHHHCS---S-
T ss_pred HHHHHCCCCEEEEC-CCC---h-h---hHHHHHHHHHHhCCCeEEEECCC-------CHHHHH----HHHHhcCC---C-
Confidence 35678999999996 332 1 1 12233556667899999998642 111222 22222211 1
Q ss_pred EEEEccccccc-CCCC--CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccC
Q 039862 82 VLAYEPVWAIG-TGKV--ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 82 iIAYEPvwAIG-tG~~--a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl 157 (173)
+|-+-++ -| ||.. ..+.. .+.++.+|+. .++||+.||+|+. +|+.+++. .++||+.||++-+
T Consensus 159 ~i~~~~~--~G~~g~~~~~~~~~-~~~i~~l~~~----------~~~pi~~~GGI~~~e~i~~~~~-~Gad~vivGsai~ 224 (248)
T 1geq_A 159 FVYLVSL--YGTTGAREEIPKTA-YDLLRRAKRI----------CRNKVAVGFGVSKREHVVSLLK-EGANGVVVGSALV 224 (248)
T ss_dssp EEEEECC--C-------CCCHHH-HHHHHHHHHH----------CSSCEEEESCCCSHHHHHHHHH-TTCSEEEECHHHH
T ss_pred eEEEEEC--CccCCCCCCCChhH-HHHHHHHHhh----------cCCCEEEEeecCCHHHHHHHHH-cCCCEEEEcHHHH
Confidence 3333444 23 2332 22332 2334445443 1489999999999 99999875 6999999999865
Q ss_pred C
Q 039862 158 K 158 (173)
Q Consensus 158 ~ 158 (173)
+
T Consensus 225 ~ 225 (248)
T 1geq_A 225 K 225 (248)
T ss_dssp H
T ss_pred h
Confidence 4
No 40
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.48 E-value=0.00029 Score=57.37 Aligned_cols=122 Identities=16% Similarity=0.079 Sum_probs=80.7
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
+++.++|++++.+ |.|-- +.+.+-++.+.+.|+.+.+-+--+... ++++.++..++
T Consensus 81 ~~~~~aGad~itv-H~Ea~-------~~~~~~i~~i~~~G~k~gval~p~t~~-----------e~l~~~l~~~D----- 136 (228)
T 3ovp_A 81 KPMAVAGANQYTF-HLEAT-------ENPGALIKDIRENGMKVGLAIKPGTSV-----------EYLAPWANQID----- 136 (228)
T ss_dssp HHHHHHTCSEEEE-EGGGC-------SCHHHHHHHHHHTTCEEEEEECTTSCG-----------GGTGGGGGGCS-----
T ss_pred HHHHHcCCCEEEE-ccCCc-------hhHHHHHHHHHHcCCCEEEEEcCCCCH-----------HHHHHHhccCC-----
Confidence 4578899999999 76642 123445778888999998888532111 11223333222
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.|.+=+++.-.+|++..|+..++ ++.+|+. ..+++|.-.|+|+++|+.++.. .|.|++.+|++-.+
T Consensus 137 ~Vl~msv~pGf~Gq~f~~~~l~k-i~~lr~~---------~~~~~I~VdGGI~~~t~~~~~~-aGAd~~VvGsaIf~ 202 (228)
T 3ovp_A 137 MALVMTVEPGFGGQKFMEDMMPK-VHWLRTQ---------FPSLDIEVDGGVGPDTVHKCAE-AGANMIVSGSAIMR 202 (228)
T ss_dssp EEEEESSCTTTCSCCCCGGGHHH-HHHHHHH---------CTTCEEEEESSCSTTTHHHHHH-HTCCEEEESHHHHT
T ss_pred eEEEeeecCCCCCcccCHHHHHH-HHHHHHh---------cCCCCEEEeCCcCHHHHHHHHH-cCCCEEEEeHHHhC
Confidence 33344444444788777777655 4455553 2358899999999999888776 89999999997654
No 41
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.37 E-value=0.0012 Score=54.04 Aligned_cols=118 Identities=16% Similarity=0.206 Sum_probs=71.2
Q ss_pred hhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC-CHHHHhcCChHHHHHHHHHHHHhccCCCCCeE
Q 039862 4 LVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGE-TLEQRESGSTVAVVAEQTKAIAEKISNWDNVV 82 (173)
Q Consensus 4 Lkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE-~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ii 82 (173)
+++.|++++++. -+- ..| +.+=+..+.++|+..++=+.- +.. +++..+... . .-+
T Consensus 114 a~~aGadgv~v~-d~~---~~~----~~~~~~~~~~~g~~~i~~~a~~t~~------------e~~~~~~~~---~-~g~ 169 (262)
T 1rd5_A 114 MKEAGVHGLIVP-DLP---YVA----AHSLWSEAKNNNLELVLLTTPAIPE------------DRMKEITKA---S-EGF 169 (262)
T ss_dssp HHHTTCCEEECT-TCB---TTT----HHHHHHHHHHTTCEECEEECTTSCH------------HHHHHHHHH---C-CSC
T ss_pred HHHcCCCEEEEc-CCC---hhh----HHHHHHHHHHcCCceEEEECCCCCH------------HHHHHHHhc---C-CCe
Confidence 678999999884 211 122 333356778899986654432 211 122222221 1 124
Q ss_pred EEEccccccc-CCCC-CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 83 LAYEPVWAIG-TGKV-ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 83 IAYEPvwAIG-tG~~-a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
+.+.++ -| ||.. ..+....+.++.+|+. .++||+.||+|+ ++|+.+++. .+.||+.||++-.+
T Consensus 170 v~~~s~--~G~tG~~~~~~~~~~~~i~~v~~~----------~~~pI~vgGGI~~~e~~~~~~~-~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 170 VYLVSV--NGVTGPRANVNPRVESLIQEVKKV----------TNKPVAVGFGISKPEHVKQIAQ-WGADGVIIGSAMVR 235 (262)
T ss_dssp EEEECS--SCCBCTTSCBCTHHHHHHHHHHHH----------CSSCEEEESCCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred EEEecC--CCCCCCCcCCCchHHHHHHHHHhh----------cCCeEEEECCcCCHHHHHHHHH-cCCCEEEEChHHHh
Confidence 556675 34 4542 1223334455555553 258999999999 999999877 78999999998543
No 42
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.36 E-value=0.0016 Score=54.13 Aligned_cols=116 Identities=10% Similarity=0.074 Sum_probs=79.7
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCC-CCe
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNW-DNV 81 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~-~~i 81 (173)
.++.+|++.|++-|+=+. ++.+..=++.|.+.||.+++||-...| +..++. . ..-
T Consensus 118 ea~~~GAD~ilLi~a~l~------~~~l~~l~~~a~~lGl~~lvEv~~~eE--------------~~~A~~----l~g~~ 173 (251)
T 1i4n_A 118 LASSVGADAILIIARILT------AEQIKEIYEAAEELGMDSLVEVHSRED--------------LEKVFS----VIRPK 173 (251)
T ss_dssp HHHHTTCSEEEEEGGGSC------HHHHHHHHHHHHTTTCEEEEEECSHHH--------------HHHHHT----TCCCS
T ss_pred HHHHcCCCEEEEecccCC------HHHHHHHHHHHHHcCCeEEEEeCCHHH--------------HHHHHh----cCCCC
Confidence 368899999999999432 245666688999999999999996543 223433 4 456
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
+|...+.-..+.+ .+.+...+....+ ..++.++-.|+|+ ++.+..+.. . +||||||++-+.
T Consensus 174 iIGinnr~l~t~~--~d~~~~~~l~~~i------------p~~~~vIaEsGI~t~edv~~~~~-~-a~avLVG~aimr 235 (251)
T 1i4n_A 174 IIGINTRDLDTFE--IKKNVLWELLPLV------------PDDTVVVAESGIKDPRELKDLRG-K-VNAVLVGTSIMK 235 (251)
T ss_dssp EEEEECBCTTTCC--BCTTHHHHHGGGS------------CTTSEEEEESCCCCGGGHHHHTT-T-CSEEEECHHHHH
T ss_pred EEEEeCcccccCC--CCHHHHHHHHHhC------------CCCCEEEEeCCCCCHHHHHHHHH-h-CCEEEEcHHHcC
Confidence 8899997665542 3333333222111 2357788899997 666666655 5 999999998775
No 43
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.29 E-value=0.0031 Score=52.00 Aligned_cols=123 Identities=18% Similarity=0.152 Sum_probs=69.5
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
+.+++.|++++++. -. ..+.+..=++.+.++|+.+|.-+..+. +.+ .+..+... ....
T Consensus 116 ~~~~~aG~dgvii~----dl----~~ee~~~~~~~~~~~gl~~i~l~~p~t-------~~~----rl~~ia~~---a~gf 173 (262)
T 2ekc_A 116 RLSREKGIDGFIVP----DL----PPEEAEELKAVMKKYVLSFVPLGAPTS-------TRK----RIKLICEA---ADEM 173 (262)
T ss_dssp HHHHHTTCCEEECT----TC----CHHHHHHHHHHHHHTTCEECCEECTTC-------CHH----HHHHHHHH---CSSC
T ss_pred HHHHHcCCCEEEEC----CC----CHHHHHHHHHHHHHcCCcEEEEeCCCC-------CHH----HHHHHHHh---CCCC
Confidence 35778999999984 11 123455556888899998766444331 111 12222221 1122
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
+..-...-..|+..+.+++.+.+.++.+|+. .++|+.+|++|+ ++++.++. .+.||+.||++-.+
T Consensus 174 iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~----------~~~pv~vG~GI~t~e~~~~~~--~gADgvIVGSai~~ 239 (262)
T 2ekc_A 174 TYFVSVTGTTGAREKLPYERIKKKVEEYREL----------CDKPVVVGFGVSKKEHAREIG--SFADGVVVGSALVK 239 (262)
T ss_dssp EEEESSCC---------CHHHHHHHHHHHHH----------CCSCEEEESSCCSHHHHHHHH--TTSSEEEECHHHHH
T ss_pred EEEEecCCccCCCCCcCcccHHHHHHHHHhh----------cCCCEEEeCCCCCHHHHHHHH--cCCCEEEECHHHHh
Confidence 2111222233333222215566677777764 258999999998 88888855 36999999998654
No 44
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.26 E-value=0.0022 Score=52.30 Aligned_cols=127 Identities=24% Similarity=0.313 Sum_probs=79.8
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
+++.++|++++.+ |.|- + ...+.+-++.+.+.|+.+.+-+.-+.. .+.++.++..++ -=+
T Consensus 74 ~~~~~aGAd~itv-h~Ea---~---~~~~~~~i~~i~~~G~k~gv~lnp~tp-----------~~~~~~~l~~~D--~Vl 133 (231)
T 3ctl_A 74 AQLARAGADFITL-HPET---I---NGQAFRLIDEIRRHDMKVGLILNPETP-----------VEAMKYYIHKAD--KIT 133 (231)
T ss_dssp HHHHHHTCSEEEE-CGGG---C---TTTHHHHHHHHHHTTCEEEEEECTTCC-----------GGGGTTTGGGCS--EEE
T ss_pred HHHHHcCCCEEEE-Cccc---C---CccHHHHHHHHHHcCCeEEEEEECCCc-----------HHHHHHHHhcCC--EEE
Confidence 4678899999977 5443 0 223456678888999999887732110 011223344333 011
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEee-cccCC
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVG-GASLK 158 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG-~asl~ 158 (173)
+...+|-.. |+..-|+..+. ++.+|+.+.+. +-+++|.-.|+||++|+.++.. .+.|++.+| ++-.+
T Consensus 134 vmsV~pGfg---gQ~f~~~~l~k-I~~lr~~~~~~-----~~~~~I~VdGGI~~~~~~~~~~-aGAd~~V~G~saif~ 201 (231)
T 3ctl_A 134 VMTVDPGFA---GQPFIPEMLDK-LAELKAWRERE-----GLEYEIEVDGSCNQATYEKLMA-AGADVFIVGTSGLFN 201 (231)
T ss_dssp EESSCTTCS---SCCCCTTHHHH-HHHHHHHHHHH-----TCCCEEEEESCCSTTTHHHHHH-HTCCEEEECTTTTGG
T ss_pred EeeeccCcC---CccccHHHHHH-HHHHHHHHhcc-----CCCceEEEECCcCHHHHHHHHH-cCCCEEEEccHHHhC
Confidence 235777543 55555544443 45566665321 2358899999999999988876 789999999 88664
No 45
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.25 E-value=0.0024 Score=53.41 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=73.0
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeE
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVV 82 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ii 82 (173)
..+++|++.|++|++--. ++.+..=+..+.+.||.+++++-...+ +..++. ..--+
T Consensus 130 ~A~~~GAD~VlLi~a~l~------~~~l~~l~~~a~~lGl~~lvev~t~ee--------------~~~A~~----~Gad~ 185 (272)
T 3qja_A 130 EARAHGADMLLLIVAALE------QSVLVSMLDRTESLGMTALVEVHTEQE--------------ADRALK----AGAKV 185 (272)
T ss_dssp HHHHTTCSEEEEEGGGSC------HHHHHHHHHHHHHTTCEEEEEESSHHH--------------HHHHHH----HTCSE
T ss_pred HHHHcCCCEEEEecccCC------HHHHHHHHHHHHHCCCcEEEEcCCHHH--------------HHHHHH----CCCCE
Confidence 356789999999998332 344544477888899999999964322 112222 11224
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 83 LAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 83 IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
|.+-|... +...++++...+ . .... ..++|++-+|+|+ ++|+.++.. .|+||++||++-++
T Consensus 186 IGv~~r~l--~~~~~dl~~~~~-------l-~~~v----~~~~pvVaegGI~t~edv~~l~~-~GadgvlVGsal~~ 247 (272)
T 3qja_A 186 IGVNARDL--MTLDVDRDCFAR-------I-APGL----PSSVIRIAESGVRGTADLLAYAG-AGADAVLVGEGLVT 247 (272)
T ss_dssp EEEESBCT--TTCCBCTTHHHH-------H-GGGS----CTTSEEEEESCCCSHHHHHHHHH-TTCSEEEECHHHHT
T ss_pred EEECCCcc--cccccCHHHHHH-------H-HHhC----cccCEEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHhC
Confidence 55555431 111233433322 1 1111 2368999999999 888877776 79999999998764
No 46
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.21 E-value=0.0057 Score=49.74 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=71.5
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
..+.+.|++.|+++.+-|..- ++...+ ++.+.+.|+..+..+....+. ..+.. ..-.
T Consensus 95 ~~~~~~Gad~V~l~~~~~~~p--~~l~~~---i~~~~~~g~~v~~~v~t~eea--------------~~a~~----~Gad 151 (232)
T 3igs_A 95 DALAQAGAAIIAVDGTARQRP--VAVEAL---LARIHHHHLLTMADCSSVDDG--------------LACQR----LGAD 151 (232)
T ss_dssp HHHHHHTCSEEEEECCSSCCS--SCHHHH---HHHHHHTTCEEEEECCSHHHH--------------HHHHH----TTCS
T ss_pred HHHHHcCCCEEEECccccCCH--HHHHHH---HHHHHHCCCEEEEeCCCHHHH--------------HHHHh----CCCC
Confidence 357889999999999865222 333333 566667799998887643221 12222 1112
Q ss_pred EEE-----EcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHhcCCCCCEEEeecc
Q 039862 82 VLA-----YEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 82 iIA-----YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~a 155 (173)
+|. |++.. ....++.+.+.+ +++ . ++|++..|+| +++++.+++.. ++||++||++
T Consensus 152 ~Ig~~~~g~t~~~---~~~~~~~~~i~~----l~~----------~-~ipvIA~GGI~t~~d~~~~~~~-GadgV~VGsa 212 (232)
T 3igs_A 152 IIGTTMSGYTTPD---TPEEPDLPLVKA----LHD----------A-GCRVIAEGRYNSPALAAEAIRY-GAWAVTVGSA 212 (232)
T ss_dssp EEECTTTTSSSSS---CCSSCCHHHHHH----HHH----------T-TCCEEEESCCCSHHHHHHHHHT-TCSEEEECHH
T ss_pred EEEEcCccCCCCC---CCCCCCHHHHHH----HHh----------c-CCcEEEECCCCCHHHHHHHHHc-CCCEEEEehH
Confidence 332 33321 112344444333 221 1 5999999999 58999998885 9999999998
Q ss_pred cCCh
Q 039862 156 SLKP 159 (173)
Q Consensus 156 sl~~ 159 (173)
-.+|
T Consensus 213 l~~p 216 (232)
T 3igs_A 213 ITRL 216 (232)
T ss_dssp HHCH
T ss_pred hcCH
Confidence 7775
No 47
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.19 E-value=0.0012 Score=54.69 Aligned_cols=126 Identities=19% Similarity=0.264 Sum_probs=79.0
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
+++.++|++++-+ |.|-- +.+.+-++.+.+.|+.+-+-+--.... +.++.++..++
T Consensus 103 ~~~~~aGAd~itv-H~Ea~-------~~~~~~i~~ir~~G~k~Gvalnp~Tp~-----------e~l~~~l~~vD----- 158 (246)
T 3inp_A 103 ESFAKAGATSIVF-HPEAS-------EHIDRSLQLIKSFGIQAGLALNPATGI-----------DCLKYVESNID----- 158 (246)
T ss_dssp HHHHHHTCSEEEE-CGGGC-------SCHHHHHHHHHTTTSEEEEEECTTCCS-----------GGGTTTGGGCS-----
T ss_pred HHHHHcCCCEEEE-ccccc-------hhHHHHHHHHHHcCCeEEEEecCCCCH-----------HHHHHHHhcCC-----
Confidence 4678999999988 56642 124455778888999998888522111 11223344332
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.|.+=+++.--+|+..-|+..++ ++.+|+.+.+. +.+++|.-.|+|+++|+.++.. .|.|.+.+|++-.+
T Consensus 159 ~VlvMsV~PGfgGQ~fi~~~l~K-I~~lr~~~~~~-----~~~~~I~VDGGI~~~ti~~~~~-aGAD~~V~GSaIf~ 228 (246)
T 3inp_A 159 RVLIMSVNPGFGGQKFIPAMLDK-AKEISKWISST-----DRDILLEIDGGVNPYNIAEIAV-CGVNAFVAGSAIFN 228 (246)
T ss_dssp EEEEECSCTTC--CCCCTTHHHH-HHHHHHHHHHH-----TSCCEEEEESSCCTTTHHHHHT-TTCCEEEESHHHHT
T ss_pred EEEEeeecCCCCCcccchHHHHH-HHHHHHHHHhc-----CCCeeEEEECCcCHHHHHHHHH-cCCCEEEEehHHhC
Confidence 23332333333566655555554 45556655332 3468899999999999887765 89999999997654
No 48
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.19 E-value=0.0011 Score=55.34 Aligned_cols=119 Identities=18% Similarity=0.228 Sum_probs=65.3
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEE-EeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIA-CVGETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIl-CvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
+.+++.|++++++.= ..+.|..+. ++.+.++|+..|+ |-..+..+ +++.+... ...
T Consensus 113 ~~~~~aG~dGviv~D----l~~ee~~~~----~~~~~~~gl~~i~liap~s~~e------------ri~~ia~~---~~g 169 (271)
T 1ujp_A 113 GLFKQAGATGVILPD----LPPDEDPGL----VRLAQEIGLETVFLLAPTSTDA------------RIATVVRH---ATG 169 (271)
T ss_dssp HHHHHHTCCEEECTT----CCGGGCHHH----HHHHHHHTCEEECEECTTCCHH------------HHHHHHTT---CCS
T ss_pred HHHHHcCCCEEEecC----CCHHHHHHH----HHHHHHcCCceEEEeCCCCCHH------------HHHHHHHh---CCC
Confidence 357889999888852 223444444 4667778886554 43433222 22222221 122
Q ss_pred eEEEEcccccccCCCCC-CHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 81 VVLAYEPVWAIGTGKVA-TPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a-~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.+..=+..-. ||... .++.+.+.++.+|+. .++|+++||+|+ +++++++ .+.||+.||+|-.+
T Consensus 170 fiy~vs~~G~--TG~~~~~~~~~~~~v~~vr~~----------~~~Pv~vGfGI~t~e~a~~~---~~ADgVIVGSAi~~ 234 (271)
T 1ujp_A 170 FVYAVSVTGV--TGMRERLPEEVKDLVRRIKAR----------TALPVAVGFGVSGKATAAQA---AVADGVVVGSALVR 234 (271)
T ss_dssp CEEEECC--------------CCHHHHHHHHTT----------CCSCEEEESCCCSHHHHHHH---TTSSEEEECHHHHH
T ss_pred CEEEEecCcc--cCCCCCCCccHHHHHHHHHhh----------cCCCEEEEcCCCCHHHHHHh---cCCCEEEEChHHhc
Confidence 2221132222 44431 233334455555543 258999999998 9999996 67999999998654
No 49
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.13 E-value=0.0029 Score=51.93 Aligned_cols=124 Identities=15% Similarity=0.193 Sum_probs=78.7
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHC---------CCeEEEEe--CCCHHHHhcCChHHHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSR---------GLKVIACV--GETLEQRESGSTVAVVAEQTKA 70 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~---------gl~pIlCv--GE~~~~r~~~~~~~~l~~Ql~~ 70 (173)
+++.++|++++.+ |.|- .+.+.+-++.+.+. |+.+.+++ +.+.+. ++.
T Consensus 86 ~~~~~aGAd~itv-H~ea-------~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~-------------l~~ 144 (237)
T 3cu2_A 86 KAVVANGANLVTL-QLEQ-------YHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISE-------------LEP 144 (237)
T ss_dssp HHHHHTTCSEEEE-ETTC-------TTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGG-------------GTT
T ss_pred HHHHHcCCCEEEE-ecCC-------cccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHH-------------HHH
Confidence 4577899998654 5543 22345557777888 99999988 333221 122
Q ss_pred HHhccCCCCCe-EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhc-CCCCC
Q 039862 71 IAEKISNWDNV-VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAA-QPDVD 148 (173)
Q Consensus 71 ~l~~v~~~~~i-iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~-~~~vD 148 (173)
.+..++ -+ +.+.+|.+. |++..|.. -+-++.+|+.+.+. +-+++|.-.|+||++|+.++.. ..++|
T Consensus 145 ~l~~~D---~vlvMsv~pgfg---gq~f~~~~-l~ki~~lr~~~~~~-----~~~~~I~vdGGI~~~~~~~~~~~~aGad 212 (237)
T 3cu2_A 145 YLDQID---VIQLLTLDPRNG---TKYPSELI-LDRVIQVEKRLGNR-----RVEKLINIDGSMTLELAKYFKQGTHQID 212 (237)
T ss_dssp TTTTCS---EEEEESEETTTT---EECCHHHH-HHHHHHHHHHHGGG-----GGGCEEEEESSCCHHHHHHHHHSSSCCC
T ss_pred HhhcCc---eeeeeeeccCcC---CeecChhH-HHHHHHHHHHHHhc-----CCCceEEEECCcCHHHHHHHHHhCCCCc
Confidence 333222 22 236799764 44443333 33456666665321 2358899999999999888764 26899
Q ss_pred EEEeecccCC
Q 039862 149 GFLVGGASLK 158 (173)
Q Consensus 149 G~LiG~asl~ 158 (173)
++.+|++-.+
T Consensus 213 ~~VvGSaIf~ 222 (237)
T 3cu2_A 213 WLVSGSALFS 222 (237)
T ss_dssp CEEECGGGGS
T ss_pred EEEEeeHHhC
Confidence 9999998764
No 50
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.13 E-value=0.0031 Score=50.23 Aligned_cols=120 Identities=15% Similarity=0.177 Sum_probs=71.4
Q ss_pred chhhcCCCEEEEccc--ccccccCCCHHHHHHHHHHHHHCCCeEEEEe--CCCHHHHhcCChHHHHHHHHHHHHhccCCC
Q 039862 3 MLVNLSIPWVILGHS--ERRALLNESNDFVGDKVAYALSRGLKVIACV--GETLEQRESGSTVAVVAEQTKAIAEKISNW 78 (173)
Q Consensus 3 mLkd~G~~~viiGHS--ERR~~~~E~~~~i~~Kv~~al~~gl~pIlCv--GE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~ 78 (173)
.+.++|++++.++=. +. +... .-++.+.+.|+..++-+ +.+.+.. +.....
T Consensus 86 ~~~~~Gad~v~vh~~~~~~-----~~~~---~~~~~~~~~g~~ig~~~~p~t~~e~~-------------~~~~~~---- 140 (230)
T 1rpx_A 86 DFIKAGADIVSVHCEQSST-----IHLH---RTINQIKSLGAKAGVVLNPGTPLTAI-------------EYVLDA---- 140 (230)
T ss_dssp HHHHTTCSEEEEECSTTTC-----SCHH---HHHHHHHHTTSEEEEEECTTCCGGGG-------------TTTTTT----
T ss_pred HHHHcCCCEEEEEecCccc-----hhHH---HHHHHHHHcCCcEEEEeCCCCCHHHH-------------HHHHhh----
Confidence 456788888876432 22 2222 22455556788777766 3332211 011111
Q ss_pred CCeEE---EEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 79 DNVVL---AYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 79 ~~iiI---AYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
.. +| +..|. ++|.+..+...+. ++.+|+.+.+. +.++|+.-+|+|+++|+.+++. .+.||+-||++
T Consensus 141 ~d-~vl~~~~~pg---~~g~~~~~~~~~~-i~~l~~~~~~~-----~~~~pi~v~GGI~~~n~~~~~~-aGad~vvvgSa 209 (230)
T 1rpx_A 141 VD-LVLIMSVNPG---FGGQSFIESQVKK-ISDLRKICAER-----GLNPWIEVDGGVGPKNAYKVIE-AGANALVAGSA 209 (230)
T ss_dssp CS-EEEEESSCTT---CSSCCCCTTHHHH-HHHHHHHHHHH-----TCCCEEEEESSCCTTTHHHHHH-HTCCEEEESHH
T ss_pred CC-EEEEEEEcCC---CCCccccHHHHHH-HHHHHHHHHhc-----CCCceEEEECCCCHHHHHHHHH-cCCCEEEEChh
Confidence 12 44 66663 4566665544433 45556554221 2358999999999999999665 58999999998
Q ss_pred cCC
Q 039862 156 SLK 158 (173)
Q Consensus 156 sl~ 158 (173)
-.+
T Consensus 210 I~~ 212 (230)
T 1rpx_A 210 VFG 212 (230)
T ss_dssp HHT
T ss_pred hhC
Confidence 775
No 51
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.05 E-value=0.0083 Score=48.72 Aligned_cols=116 Identities=18% Similarity=0.114 Sum_probs=71.5
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHh-ccCCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDN 80 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~-~v~~~~~ 80 (173)
..+.+.|++.|+++.+-|..- ++...+ ++.+.+.|+..+..+....+. ..+.. +.+
T Consensus 95 ~~~~~aGad~I~l~~~~~~~p--~~l~~~---i~~~~~~g~~v~~~v~t~eea--------------~~a~~~Gad---- 151 (229)
T 3q58_A 95 DALAQAGADIIAFDASFRSRP--VDIDSL---LTRIRLHGLLAMADCSTVNEG--------------ISCHQKGIE---- 151 (229)
T ss_dssp HHHHHHTCSEEEEECCSSCCS--SCHHHH---HHHHHHTTCEEEEECSSHHHH--------------HHHHHTTCS----
T ss_pred HHHHHcCCCEEEECccccCCh--HHHHHH---HHHHHHCCCEEEEecCCHHHH--------------HHHHhCCCC----
Confidence 357889999999999865222 333333 566667799999887643322 12222 222
Q ss_pred eEEE-----EcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHhcCCCCCEEEeec
Q 039862 81 VVLA-----YEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 81 iiIA-----YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~ 154 (173)
+|. |++.. .-..++.+ .+++.. + . ++|++-.|+| +++++.+++.. ++||++||+
T Consensus 152 -~Ig~~~~g~t~~~---~~~~~~~~-------li~~l~-~------~-~ipvIA~GGI~t~~d~~~~~~~-GadgV~VGs 211 (229)
T 3q58_A 152 -FIGTTLSGYTGPI---TPVEPDLA-------MVTQLS-H------A-GCRVIAEGRYNTPALAANAIEH-GAWAVTVGS 211 (229)
T ss_dssp -EEECTTTTSSSSC---CCSSCCHH-------HHHHHH-T------T-TCCEEEESSCCSHHHHHHHHHT-TCSEEEECH
T ss_pred -EEEecCccCCCCC---cCCCCCHH-------HHHHHH-H------c-CCCEEEECCCCCHHHHHHHHHc-CCCEEEEch
Confidence 232 33321 11123333 333332 1 2 5999999999 58999998885 999999999
Q ss_pred ccCChH
Q 039862 155 ASLKPE 160 (173)
Q Consensus 155 asl~~~ 160 (173)
+-.++.
T Consensus 212 ai~~p~ 217 (229)
T 3q58_A 212 AITRIE 217 (229)
T ss_dssp HHHCHH
T ss_pred HhcChH
Confidence 877753
No 52
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.00 E-value=0.0064 Score=50.12 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=68.6
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
+.+++.|++++++ |.+- +.|.. .=++.+.++|+.+++=+..+. +.+ .+..+.... ...
T Consensus 116 ~~~~~aGadgii~-~d~~---~e~~~----~~~~~~~~~g~~~i~l~~p~t-------~~~----~i~~i~~~~---~g~ 173 (268)
T 1qop_A 116 ARCEQVGVDSVLV-ADVP---VEESA----PFRQAALRHNIAPIFICPPNA-------DDD----LLRQVASYG---RGY 173 (268)
T ss_dssp HHHHHHTCCEEEE-TTCC---GGGCH----HHHHHHHHTTCEEECEECTTC-------CHH----HHHHHHHHC---CSC
T ss_pred HHHHHcCCCEEEE-cCCC---HHHHH----HHHHHHHHcCCcEEEEECCCC-------CHH----HHHHHHhhC---CCc
Confidence 3577889999888 3332 22333 336778889998765444331 111 222223221 122
Q ss_pred EEEEccccccc-CCCC-CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC
Q 039862 82 VLAYEPVWAIG-TGKV-ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 82 iIAYEPvwAIG-tG~~-a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl 157 (173)
+ -+-- -. | ||.. ..+....+.++.+|+. .++||..||+|+ ++++.+.+. .+.||+.||++-.
T Consensus 174 v-~~~s-~~-G~tG~~~~~~~~~~~~i~~lr~~----------~~~pi~vggGI~t~e~~~~~~~-agAD~vVVGSai~ 238 (268)
T 1qop_A 174 T-YLLS-RS-GVTGAENRGALPLHHLIEKLKEY----------HAAPALQGFGISSPEQVSAAVR-AGAAGAISGSAIV 238 (268)
T ss_dssp E-EEES-SS-SCCCSSSCC--CCHHHHHHHHHT----------TCCCEEEESSCCSHHHHHHHHH-TTCSEEEECHHHH
T ss_pred E-EEEe-cC-CcCCCccCCCchHHHHHHHHHhc----------cCCcEEEECCCCCHHHHHHHHH-cCCCEEEEChHHh
Confidence 2 2222 12 3 5553 2233344455556653 158999999999 888888554 5799999999854
No 53
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=96.91 E-value=0.023 Score=44.49 Aligned_cols=122 Identities=14% Similarity=0.197 Sum_probs=71.5
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeC--CCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVG--ETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvG--E~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
.+.++|++++.+.=.+. +..... ++.+.+.|+..++-+. .+.+. ++..... ..-
T Consensus 79 ~~~~~gad~v~vh~~~~-----~~~~~~---~~~~~~~g~~i~~~~~~~t~~e~-------------~~~~~~~---~d~ 134 (220)
T 2fli_A 79 AFAQAGADIMTIHTEST-----RHIHGA---LQKIKAAGMKAGVVINPGTPATA-------------LEPLLDL---VDQ 134 (220)
T ss_dssp HHHHHTCSEEEEEGGGC-----SCHHHH---HHHHHHTTSEEEEEECTTSCGGG-------------GGGGTTT---CSE
T ss_pred HHHHcCCCEEEEccCcc-----ccHHHH---HHHHHHcCCcEEEEEcCCCCHHH-------------HHHHHhh---CCE
Confidence 46788999998743322 222222 3445567888877773 22211 1111111 111
Q ss_pred eE-EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 81 VV-LAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 81 ii-IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++ .+++|. ++|.+.++...++ .+.+|+..... +.++|++-.|+|+++|+.++.. .+.||+-||++-.+
T Consensus 135 vl~~~~~~g---~~g~~~~~~~~~~-i~~~~~~~~~~-----~~~~~i~v~GGI~~~~~~~~~~-~Gad~vvvGsai~~ 203 (220)
T 2fli_A 135 VLIMTVNPG---FGGQAFIPECLEK-VATVAKWRDEK-----GLSFDIEVDGGVDNKTIRACYE-AGANVFVAGSYLFK 203 (220)
T ss_dssp EEEESSCTT---CSSCCCCGGGHHH-HHHHHHHHHHT-----TCCCEEEEESSCCTTTHHHHHH-HTCCEEEESHHHHT
T ss_pred EEEEEECCC---CcccccCHHHHHH-HHHHHHHHHhc-----CCCceEEEECcCCHHHHHHHHH-cCCCEEEEChHHhC
Confidence 11 256663 4566666544333 45556654221 2358899999999999999665 58999999998665
No 54
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.62 E-value=0.051 Score=42.60 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=31.4
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCChH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
++||+--|+| +++|+.+++. .++||+.+|++-+++.
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~-~Gad~v~vG~al~~p~ 211 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMD-LGVHCSVVGGAITRPK 211 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHCHH
T ss_pred CCCEEEecCCCCHHHHHHHHH-cCCCEEEEChHHcCcH
Confidence 5999999999 9999999987 4899999999866654
No 55
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.59 E-value=0.032 Score=49.87 Aligned_cols=116 Identities=17% Similarity=0.105 Sum_probs=81.4
Q ss_pred hhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEE
Q 039862 4 LVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVL 83 (173)
Q Consensus 4 Lkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiI 83 (173)
++.+|++.|++-|+=+. ++.+..=++.|.+.||.+++||-...|. ..++. ...-+|
T Consensus 126 a~~~GAD~ILLi~a~l~------~~~l~~l~~~a~~lgm~~LvEvh~~eE~--------------~~A~~----lga~iI 181 (452)
T 1pii_A 126 ARYYQADACLLMLSVLD------DDQYRQLAAVAHSLEMGVLTEVSNEEEQ--------------ERAIA----LGAKVV 181 (452)
T ss_dssp HHHTTCSEEEEETTTCC------HHHHHHHHHHHHHTTCEEEEEECSHHHH--------------HHHHH----TTCSEE
T ss_pred HHHcCCCEEEEEcccCC------HHHHHHHHHHHHHcCCeEEEEeCCHHHH--------------HHHHH----CCCCEE
Confidence 67899999999999432 4566677889999999999999876442 23443 344578
Q ss_pred EEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 84 AYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 84 AYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
...+.-... -..+.+...+....| ..+++++-.|+|+.......+... +||+|||.+-+.
T Consensus 182 Ginnr~L~t--~~~dl~~~~~L~~~i------------p~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr 241 (452)
T 1pii_A 182 GINNRDLRD--LSIDLNRTRELAPKL------------GHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMA 241 (452)
T ss_dssp EEESEETTT--TEECTHHHHHHHHHH------------CTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHT
T ss_pred EEeCCCCCC--CCCCHHHHHHHHHhC------------CCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 888875543 234444444433332 235789999999876655556666 999999998776
No 56
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.53 E-value=0.037 Score=43.90 Aligned_cols=119 Identities=13% Similarity=0.136 Sum_probs=72.6
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEE-EeCCCHHHHhcCChHHHHHHHHHHHHh-ccCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIA-CVGETLEQRESGSTVAVVAEQTKAIAE-KISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIl-CvGE~~~~r~~~~~~~~l~~Ql~~~l~-~v~~~~ 79 (173)
+++.++|++++.+ |.|-. .+.+..=++.+.++|+.+++ ++|=...+ ++..+.. +++
T Consensus 77 ~~~~~aGad~i~v-h~~~~------~~~~~~~~~~~~~~g~~~~~d~l~~~T~~------------~~~~~~~~g~d--- 134 (218)
T 3jr2_A 77 RMAFEAGADWITV-SAAAH------IATIAACKKVADELNGEIQIEIYGNWTMQ------------DAKAWVDLGIT--- 134 (218)
T ss_dssp HHHHHHTCSEEEE-ETTSC------HHHHHHHHHHHHHHTCEEEEECCSSCCHH------------HHHHHHHTTCC---
T ss_pred HHHHhcCCCEEEE-ecCCC------HHHHHHHHHHHHHhCCccceeeeecCCHH------------HHHHHHHcCcc---
Confidence 4678899999887 76642 22333445666778999987 66642111 1112222 222
Q ss_pred CeE--EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 80 NVV--LAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 80 ~ii--IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
-++ .+|.|-. .|.+.+++.++. ||+.. +.++|+.-+|+|+++|+.+++. .+.|++-||++-.
T Consensus 135 ~v~~~~~~~~~~---~g~~~~~~~l~~----i~~~~--------~~~~pi~v~GGI~~~~~~~~~~-aGAd~vvvGsaI~ 198 (218)
T 3jr2_A 135 QAIYHRSRDAEL---AGIGWTTDDLDK----MRQLS--------ALGIELSITGGIVPEDIYLFEG-IKTKTFIAGRALA 198 (218)
T ss_dssp EEEEECCHHHHH---HTCCSCHHHHHH----HHHHH--------HTTCEEEEESSCCGGGGGGGTT-SCEEEEEESGGGS
T ss_pred ceeeeecccccc---CCCcCCHHHHHH----HHHHh--------CCCCCEEEECCCCHHHHHHHHH-cCCCEEEEchhhc
Confidence 111 1233321 255566666554 34432 1358999999999999887554 7899999999877
Q ss_pred C
Q 039862 158 K 158 (173)
Q Consensus 158 ~ 158 (173)
+
T Consensus 199 ~ 199 (218)
T 3jr2_A 199 G 199 (218)
T ss_dssp H
T ss_pred C
Confidence 5
No 57
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=96.45 E-value=0.033 Score=43.13 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=30.1
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++-+|+|+++|+.+++. .++||+.+|++-+.
T Consensus 162 ~~pvia~GGI~~~nv~~~~~-~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 162 KIPVVAIGGINKDNAREVLK-TGVDGIAVISAVMG 195 (215)
T ss_dssp SSCEEEESSCCTTTHHHHHT-TTCSEEEESHHHHT
T ss_pred CCCEEEECCcCHHHHHHHHH-cCCCEEEEhHHHhC
Confidence 58999999999999999876 79999999997664
No 58
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=96.38 E-value=0.029 Score=46.23 Aligned_cols=121 Identities=14% Similarity=0.123 Sum_probs=68.9
Q ss_pred chhhcC-CCEEEE-cccccccccCCCHHHHHHHHHHHHHCCCeEE-EEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 3 MLVNLS-IPWVIL-GHSERRALLNESNDFVGDKVAYALSRGLKVI-ACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 3 mLkd~G-~~~vii-GHSERR~~~~E~~~~i~~Kv~~al~~gl~pI-lCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
+++++| ..++-+ .+.+.+..+.|. ....+.++..+..|+.++ +|+..+.+ +..+... ..
T Consensus 87 ~a~~agg~~~i~l~i~~d~~~~~~e~-~~~~~~a~~~~~~g~~vi~~~~~~~~~--------------a~~~~~~---ga 148 (264)
T 1xm3_A 87 LAKASGLCDMIKVEVIGCSRSLLPDP-VETLKASEQLLEEGFIVLPYTSDDVVL--------------ARKLEEL---GV 148 (264)
T ss_dssp HHHHTTCCSSEEECCBCCTTTCCBCH-HHHHHHHHHHHHTTCCEEEEECSCHHH--------------HHHHHHH---TC
T ss_pred HHHHcCCCCeEEEeecCCCcccccch-HHHHHHHHHHHCCCeEEEEEcCCCHHH--------------HHHHHHh---CC
Confidence 345553 344322 344554444444 345455666666799998 77765321 1122211 12
Q ss_pred CeEEEEcccccccCCCCC-CHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC
Q 039862 80 NVVLAYEPVWAIGTGKVA-TPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a-~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl 157 (173)
..++.+=++ +|++... +++ .++.+|+. .++|++-||+|+ ++++.+++. .+.||++||++-+
T Consensus 149 d~v~~~~~~--~Gt~~~~~~~~----~l~~i~~~----------~~iPviv~gGI~t~eda~~~~~-~GAdgViVGSAi~ 211 (264)
T 1xm3_A 149 HAIMPGASP--IGSGQGILNPL----NLSFIIEQ----------AKVPVIVDAGIGSPKDAAYAME-LGADGVLLNTAVS 211 (264)
T ss_dssp SCBEECSSS--TTCCCCCSCHH----HHHHHHHH----------CSSCBEEESCCCSHHHHHHHHH-TTCSEEEESHHHH
T ss_pred CEEEECCcc--cCCCCCCCCHH----HHHHHHhc----------CCCCEEEEeCCCCHHHHHHHHH-cCCCEEEEcHHHh
Confidence 233333232 4655432 333 33444432 259999999996 899888776 6899999999766
Q ss_pred C
Q 039862 158 K 158 (173)
Q Consensus 158 ~ 158 (173)
+
T Consensus 212 ~ 212 (264)
T 1xm3_A 212 G 212 (264)
T ss_dssp T
T ss_pred C
Confidence 4
No 59
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.34 E-value=0.033 Score=43.58 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=31.1
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+-.|+|+++|+.+++. .++||+.+|++-+.
T Consensus 148 ~ipvia~GGI~~~~i~~~~~-~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 148 DIAVFAVGGVTPENLAQWID-AGCAGAGLGSDLYR 181 (212)
T ss_dssp TCEEEEESSCCTTTHHHHHH-HTCSEEEECTTTCC
T ss_pred CCeEEEeCCCCHHHHHHHHH-cCCCEEEEChHHhC
Confidence 59999999999999999987 79999999998775
No 60
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=96.11 E-value=0.0099 Score=48.72 Aligned_cols=44 Identities=23% Similarity=0.483 Sum_probs=35.2
Q ss_pred cceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC-hH-HHHHHHHHh
Q 039862 124 STRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK-PE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~~ 169 (173)
++|+.+||+|+... +++++ .+.||+.||+|..+ ++ +.++++.+.
T Consensus 180 ~~Pv~vGGGI~t~e~a~~~~--~gAD~VVVGSa~v~~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 180 TSTLFYGGGIKDAETAKQYA--EHADVIVVGNAVYEDFDRALKTVAAVK 226 (228)
T ss_dssp SSEEEEESSCCSHHHHHHHH--TTCSEEEECTHHHHCHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHH--hCCCEEEEChHHhcCHHHHHHHHHHHh
Confidence 58999999997655 66665 59999999999986 66 777777654
No 61
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=95.77 E-value=0.005 Score=50.79 Aligned_cols=46 Identities=24% Similarity=0.437 Sum_probs=33.4
Q ss_pred cceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC-hH-HHHHHHHHhhh
Q 039862 124 STRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK-PE-FIDIIKSATVK 171 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~~~~ 171 (173)
++|+++||+|+... +++++ . +.||+.||+|-.+ ++ |.++++.+..+
T Consensus 186 ~~pv~vGfGI~~~e~a~~~~-~-gAD~VVVGSai~~~~~~~~e~v~~v~~~ 234 (235)
T 3w01_A 186 ETQLFYGGGISSEQQATEMA-A-IADTIIVGDIIYKDIKKALKTVKIKESS 234 (235)
T ss_dssp SSEEEEESCCCSHHHHHHHH-T-TSSEEEECTHHHHCHHHHHHTTCC----
T ss_pred CCCEEEECCcCCHHHHHHHH-c-CCCEEEECCceecCHHHHHHHHHHHhcC
Confidence 58999999997766 55555 4 8999999999885 65 77777655543
No 62
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.58 E-value=0.029 Score=44.14 Aligned_cols=72 Identities=14% Similarity=0.076 Sum_probs=50.0
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCCh-
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLKP- 159 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~~- 159 (173)
.|.+-|+..-|++..++.+.+.+ +++. .++|++.+|+|+. +|+.+++. .++||+++|++-+..
T Consensus 170 ~i~~~~~~~~g~~~~~~~~~i~~----l~~~----------~~~pvia~GGi~~~~~~~~~~~-~Ga~~v~vgsal~~~~ 234 (253)
T 1h5y_A 170 EILLTSIDRDGTGLGYDVELIRR----VADS----------VRIPVIASGGAGRVEHFYEAAA-AGADAVLAASLFHFRV 234 (253)
T ss_dssp EEEEEETTTTTTCSCCCHHHHHH----HHHH----------CSSCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHHTTS
T ss_pred EEEEecccCCCCcCcCCHHHHHH----HHHh----------cCCCEEEeCCCCCHHHHHHHHH-cCCcHHHHHHHHHcCC
Confidence 44455777677776666655543 2222 1589999999995 99999884 799999999987753
Q ss_pred -HHHHHHHHH
Q 039862 160 -EFIDIIKSA 168 (173)
Q Consensus 160 -~f~~Ii~~~ 168 (173)
.+.++.+.+
T Consensus 235 ~~~~~~~~~l 244 (253)
T 1h5y_A 235 LSIAQVKRYL 244 (253)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 255555544
No 63
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=95.51 E-value=0.22 Score=38.83 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=30.0
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++-+|+|+++|+.+++. .+.||+-||++-++
T Consensus 172 ~~pvia~GGI~~~nv~~~~~-~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 172 SIPIVGIGGITIDNAAPVIQ-AGADGVSMISAISQ 205 (227)
T ss_dssp CCCEEEESSCCTTTSHHHHH-TTCSEEEESHHHHT
T ss_pred CCCEEEEcCCCHHHHHHHHH-cCCCEEEEhHHhhc
Confidence 38999999999999999876 68999999997663
No 64
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.25 E-value=0.071 Score=42.25 Aligned_cols=35 Identities=29% Similarity=0.546 Sum_probs=31.1
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCCh
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLKP 159 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~~ 159 (173)
++||+-.|+|+ ++|+.+++. .++||+.+|++-+.+
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~-~Gad~v~vGsal~~p 221 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKIND-LGVAGIVVGGAITRP 221 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHT-TCCSEEEECHHHHCH
T ss_pred CCCEEEECCCCCHHHHHHHHH-CCCCEEEEchHHhCh
Confidence 58999999998 999999987 589999999987664
No 65
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=95.22 E-value=0.023 Score=46.79 Aligned_cols=43 Identities=23% Similarity=0.497 Sum_probs=32.5
Q ss_pred cceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC-hH-HHHHHHHH
Q 039862 124 STRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~ 168 (173)
++|+++||+|+... +++++. +.||+.||+|..+ ++ |++=++..
T Consensus 182 ~~Pv~vGgGI~t~e~a~~~~~--gAd~VIVGSa~v~~~~~~~~~v~~~ 227 (240)
T 1viz_A 182 TSTLFYGGGIKDAETAKQYAE--HADVIVVGNAVYEDFDRALKTVAAV 227 (240)
T ss_dssp SSEEEEESSCCSHHHHHHHHT--TCSEEEECTHHHHCHHHHHTHHHHH
T ss_pred CCCEEEEeccCCHHHHHHHHh--CCCEEEEChHHHhCHHHHHHHHHHH
Confidence 58999999999755 566554 9999999999886 66 54435443
No 66
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=94.98 E-value=0.028 Score=44.71 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=49.0
Q ss_pred EcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCc-ccHHHHhcCC--CCCEEEeecccCC-hH
Q 039862 85 YEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNG-ANCKELAAQP--DVDGFLVGGASLK-PE 160 (173)
Q Consensus 85 YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~-~n~~~~~~~~--~vDG~LiG~asl~-~~ 160 (173)
+-++..-|++..++.+.++++. + ..++||++.|+|+. +++.+++... ++||+++|++-+. +.
T Consensus 168 ~~~~~~~~~~~g~~~~~~~~l~----~----------~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~ 233 (244)
T 2y88_A 168 VTDITKDGTLGGPNLDLLAGVA----D----------RTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRF 233 (244)
T ss_dssp EEETTTTTTTSCCCHHHHHHHH----T----------TCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSS
T ss_pred EEecCCccccCCCCHHHHHHHH----H----------hCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCc
Confidence 4455444555555655554432 1 12599999999996 9999988764 9999999999886 43
Q ss_pred -HHHHHHHH
Q 039862 161 -FIDIIKSA 168 (173)
Q Consensus 161 -f~~Ii~~~ 168 (173)
|.++++.+
T Consensus 234 ~~~~~~~~~ 242 (244)
T 2y88_A 234 TLPQALAAV 242 (244)
T ss_dssp CHHHHHHHT
T ss_pred CHHHHHHHh
Confidence 77777654
No 67
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=94.62 E-value=0.35 Score=40.70 Aligned_cols=130 Identities=14% Similarity=0.150 Sum_probs=75.9
Q ss_pred cchhhcCCCEEE----Eccc---ccccccCCCHHHHHHHHHHHHHCCCeEEEEeC---CCHHHHhcCChHHHHHHHHHHH
Q 039862 2 EMLVNLSIPWVI----LGHS---ERRALLNESNDFVGDKVAYALSRGLKVIACVG---ETLEQRESGSTVAVVAEQTKAI 71 (173)
Q Consensus 2 ~mLkd~G~~~vi----iGHS---ERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvG---E~~~~r~~~~~~~~l~~Ql~~~ 71 (173)
++..++|++.|= .| + |+++ -+.+.+=.+.|.+.|+..++=+. .... +..+..+.+......+
T Consensus 115 e~a~~~GAdaV~vlv~~~-~d~~~~~~-----~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~--~~~~~~~~v~~aa~~a 186 (304)
T 1to3_A 115 QAVKRDGAKALKLLVLWR-SDEDAQQR-----LNMVKEFNELCHSNGLLSIIEPVVRPPRCG--DKFDREQAIIDAAKEL 186 (304)
T ss_dssp HHHHHTTCCEEEEEEEEC-TTSCHHHH-----HHHHHHHHHHHHTTTCEEEEEEEECCCSSC--SCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEEEcC-CCccHHHH-----HHHHHHHHHHHHHcCCcEEEEEECCCCccc--cCCChhHHHHHHHHHH
Confidence 456678888775 44 4 3322 24566667888889998665332 2211 1111113333333333
Q ss_pred HhccCCCCCeEEEEcc-cccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcce-EEEcCCCCc----ccHHHHhcCC
Q 039862 72 AEKISNWDNVVLAYEP-VWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTR-IIYGGSVNG----ANCKELAAQP 145 (173)
Q Consensus 72 l~~v~~~~~iiIAYEP-vwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~-ilYGGSV~~----~n~~~~~~~~ 145 (173)
.. +.-.+|-.+| ++ |+| +++...++++.... .-.+| |+--|++++ +|+...+. .
T Consensus 187 ~~----lGaD~iKv~~~~~--~~g---~~~~~~~vv~~~~~----------~~~~P~Vv~aGG~~~~~~~~~~~~a~~-a 246 (304)
T 1to3_A 187 GD----SGADLYKVEMPLY--GKG---ARSDLLTASQRLNG----------HINMPWVILSSGVDEKLFPRAVRVAME-A 246 (304)
T ss_dssp TT----SSCSEEEECCGGG--GCS---CHHHHHHHHHHHHH----------TCCSCEEECCTTSCTTTHHHHHHHHHH-T
T ss_pred HH----cCCCEEEeCCCcC--CCC---CHHHHHHHHHhccc----------cCCCCeEEEecCCCHHHHHHHHHHHHH-c
Confidence 22 3345787888 67 555 66766665554221 12478 777777777 45777775 5
Q ss_pred CCCEEEeecccCCh
Q 039862 146 DVDGFLVGGASLKP 159 (173)
Q Consensus 146 ~vDG~LiG~asl~~ 159 (173)
+++|+.+||+.+..
T Consensus 247 Ga~Gv~vGRaI~q~ 260 (304)
T 1to3_A 247 GASGFLAGRAVWSS 260 (304)
T ss_dssp TCCEEEESHHHHGG
T ss_pred CCeEEEEehHHhCc
Confidence 99999999987754
No 68
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=94.56 E-value=0.087 Score=41.97 Aligned_cols=45 Identities=9% Similarity=0.045 Sum_probs=36.8
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCCh--HHHHHHHHHh
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLKP--EFIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~~--~f~~Ii~~~~ 169 (173)
++|++.+|+|+. +++.+++. .++||++||++-+.. .|.+..+.+.
T Consensus 196 ~ipvia~GGI~~~~d~~~~~~-~Gadgv~vgsal~~~~~~~~~~~~~l~ 243 (252)
T 1ka9_F 196 GVPVIASGGAGRMEHFLEAFQ-AGAEAALAASVFHFGEIPIPKLKRYLA 243 (252)
T ss_dssp SSCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHH-CCCHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 599999999995 99999885 899999999988863 3777666544
No 69
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=94.28 E-value=0.028 Score=46.09 Aligned_cols=33 Identities=24% Similarity=0.597 Sum_probs=27.4
Q ss_pred cceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|+.+||+|+... +++++. +.||+.||+|..+
T Consensus 190 ~~Pv~vGgGI~s~e~a~~~~~--gAd~VIVGSa~v~ 223 (234)
T 2f6u_A 190 KARLFYGGGIDSREKAREMLR--YADTIIVGNVIYE 223 (234)
T ss_dssp SSEEEEESCCCSHHHHHHHHH--HSSEEEECHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHh--CCCEEEEChHHHh
Confidence 58999999999755 666655 9999999999765
No 70
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=93.98 E-value=0.56 Score=36.69 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=30.6
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++--|+|+++|+.+++. .+.||+.+|++-+.
T Consensus 164 ~~pvia~GGI~~~nv~~~~~-~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 164 SIPVIAIGGMTPDRLRDVKQ-AGADGIAVMSGIFS 197 (221)
T ss_dssp CSCEEEESSCCGGGHHHHHH-TTCSEEEESHHHHT
T ss_pred CCCEEEECCCCHHHHHHHHH-cCCCEEEEhHHhhC
Confidence 58999999999999999998 79999999998764
No 71
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.94 E-value=0.035 Score=44.37 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=34.8
Q ss_pred cceEEEcCCCCc-ccHHHHhcCC----C-CCEEEeecccCChH--HHHHHHH
Q 039862 124 STRIIYGGSVNG-ANCKELAAQP----D-VDGFLVGGASLKPE--FIDIIKS 167 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~----~-vDG~LiG~asl~~~--f~~Ii~~ 167 (173)
++|++.+|+|+. +++.+++... + +||++||+|-+... +.++.+.
T Consensus 188 ~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 188 EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHHHH
Confidence 489999999995 9999998764 8 99999999887632 5555443
No 72
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=93.89 E-value=0.01 Score=47.73 Aligned_cols=42 Identities=19% Similarity=0.261 Sum_probs=0.0
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC-hH-HHHHHH
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK-PE-FIDIIK 166 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~ 166 (173)
++|++..|+|+ ++++.+++.. ++||++||++-+. |+ |.++.+
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~~-Gad~v~vg~al~~~p~~~~~~~~ 244 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFLR-GADKVSINTAAVENPSLITQIAQ 244 (247)
T ss_dssp ----------------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHc-CCcHhhccHHHHcCcHHHHHHHH
Confidence 58999999998 8888888886 8999999999886 66 665544
No 73
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=93.85 E-value=0.073 Score=42.36 Aligned_cols=45 Identities=18% Similarity=0.366 Sum_probs=36.9
Q ss_pred cceEEEcCCCCc-ccHHHHhcCC--CCCEEEeecccCCh--HHHHHHHHH
Q 039862 124 STRIIYGGSVNG-ANCKELAAQP--DVDGFLVGGASLKP--EFIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~--~vDG~LiG~asl~~--~f~~Ii~~~ 168 (173)
++||+..|+|+. +|+.+++... ++||+++|++-+.. .|.++++..
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHHh
Confidence 599999999996 9999998765 99999999988763 377766543
No 74
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.84 E-value=0.53 Score=37.89 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=70.8
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
++..+.|++++..|+.. ..+ ++.|.+.|...+.-+... .++..++. ..-.
T Consensus 83 ~~A~~aGAd~v~~p~~d---------~~v---~~~ar~~g~~~i~Gv~t~--------------~e~~~A~~----~Gad 132 (224)
T 1vhc_A 83 VLAKSSGADFVVTPGLN---------PKI---VKLCQDLNFPITPGVNNP--------------MAIEIALE----MGIS 132 (224)
T ss_dssp HHHHHHTCSEEECSSCC---------HHH---HHHHHHTTCCEECEECSH--------------HHHHHHHH----TTCC
T ss_pred HHHHHCCCCEEEECCCC---------HHH---HHHHHHhCCCEEeccCCH--------------HHHHHHHH----CCCC
Confidence 34568899999777532 222 467777887766543322 12222332 2233
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCCh--
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-- 159 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~-- 159 (173)
+|.+=|..+.| .++.++ .++.. + .++|++==|+|+++|+.+++...+++|+- |++-.+.
T Consensus 133 ~vk~Fpa~~~g-----G~~~lk----~l~~~----~-----~~ipvvaiGGI~~~N~~~~l~agga~~v~-gS~i~~~~~ 193 (224)
T 1vhc_A 133 AVKFFPAEASG-----GVKMIK----ALLGP----Y-----AQLQIMPTGGIGLHNIRDYLAIPNIVACG-GSWFVEKKL 193 (224)
T ss_dssp EEEETTTTTTT-----HHHHHH----HHHTT----T-----TTCEEEEBSSCCTTTHHHHHTSTTBCCEE-ECGGGCHHH
T ss_pred EEEEeeCcccc-----CHHHHH----HHHhh----C-----CCCeEEEECCcCHHHHHHHHhcCCCEEEE-EchhcCcch
Confidence 56666732221 133322 22221 2 36999999999999999999988999999 8876652
Q ss_pred ----HHHHHHHHH
Q 039862 160 ----EFIDIIKSA 168 (173)
Q Consensus 160 ----~f~~Ii~~~ 168 (173)
+|..|-+.+
T Consensus 194 i~~~~~~~i~~~a 206 (224)
T 1vhc_A 194 IQSNNWDEIGRLV 206 (224)
T ss_dssp HHTTCHHHHHHHH
T ss_pred hccCCHHHHHHHH
Confidence 255555544
No 75
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=93.80 E-value=0.095 Score=41.76 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=37.0
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCCh--HHHHHHHHHh
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLKP--EFIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~~--~f~~Ii~~~~ 169 (173)
++||+.+|+|+. +|+.+++. .++||++||++-+.. .|.+..+.+.
T Consensus 195 ~ipvia~GGI~~~~d~~~~~~-~Gadgv~vGsal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 195 TLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDVRELKEYLK 242 (253)
T ss_dssp CSCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHHTTCSCHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCChHHHHHHHHHcCCCCHHHHHHHHH
Confidence 599999999995 99999885 899999999988863 4766666553
No 76
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=93.75 E-value=0.49 Score=39.49 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=29.2
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+-.|+| +++|+.+.+. .+.||+.+|++-+.
T Consensus 172 ~iPviaaGGI~~~~~v~~al~-~GAdgV~vGs~~~~ 206 (328)
T 2gjl_A 172 RVPIIASGGFADGRGLVAALA-LGADAINMGTRFLA 206 (328)
T ss_dssp CSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHT
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHc
Confidence 5999999999 5789988887 58999999997664
No 77
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=93.65 E-value=0.37 Score=38.97 Aligned_cols=101 Identities=13% Similarity=0.018 Sum_probs=65.0
Q ss_pred HHHHHHH---HHHHCCCeEEEEeC--CCHHHHhcCChHHHHHHHHHHHHh--ccCCCCCeEEEEcccccccCCCCCCHHH
Q 039862 29 FVGDKVA---YALSRGLKVIACVG--ETLEQRESGSTVAVVAEQTKAIAE--KISNWDNVVLAYEPVWAIGTGKVATPAQ 101 (173)
Q Consensus 29 ~i~~Kv~---~al~~gl~pIlCvG--E~~~~r~~~~~~~~l~~Ql~~~l~--~v~~~~~iiIAYEPvwAIGtG~~a~~e~ 101 (173)
.+.+-++ .+.+.|+.+-+-+. .+.+ .++.++. .++ +|..=+++.--+|+..-|+.
T Consensus 99 ~~~~~i~~~~~i~~~G~k~gvalnp~tp~~-------------~~~~~l~~g~~D-----~VlvmsV~pGf~gq~f~~~~ 160 (227)
T 1tqx_A 99 DTERCIQLAKEIRDNNLWCGISIKPKTDVQ-------------KLVPILDTNLIN-----TVLVMTVEPGFGGQSFMHDM 160 (227)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECTTSCGG-------------GGHHHHTTTCCS-----EEEEESSCTTCSSCCCCGGG
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCCcHH-------------HHHHHhhcCCcC-----EEEEeeeccCCCCcccchHH
Confidence 3455577 88899999988873 2221 2334444 333 44333333323476665555
Q ss_pred HHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 102 AQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 102 i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.++ ++.+|+.+ .+++|.--|+|+++|+.++.. .+.|.+.+|++-.+
T Consensus 161 l~k-i~~lr~~~---------~~~~I~VdGGI~~~ti~~~~~-aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 161 MGK-VSFLRKKY---------KNLNIQVDGGLNIETTEISAS-HGANIIVAGTSIFN 206 (227)
T ss_dssp HHH-HHHHHHHC---------TTCEEEEESSCCHHHHHHHHH-HTCCEEEESHHHHT
T ss_pred HHH-HHHHHHhc---------cCCeEEEECCCCHHHHHHHHH-cCCCEEEEeHHHhC
Confidence 444 34455542 158899999999999888876 79999999998664
No 78
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=93.59 E-value=0.93 Score=36.06 Aligned_cols=119 Identities=14% Similarity=0.105 Sum_probs=72.5
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
++..+.|++++..|+... +. ++.+.+.|+..+.-+-... |+..++. ..-.
T Consensus 82 ~~A~~aGAd~v~~p~~d~--------~v----~~~~~~~g~~~i~G~~t~~--------------e~~~A~~----~Gad 131 (214)
T 1wbh_A 82 AEVTEAGAQFAISPGLTE--------PL----LKAATEGTIPLIPGISTVS--------------ELMLGMD----YGLK 131 (214)
T ss_dssp HHHHHHTCSCEEESSCCH--------HH----HHHHHHSSSCEEEEESSHH--------------HHHHHHH----TTCC
T ss_pred HHHHHcCCCEEEcCCCCH--------HH----HHHHHHhCCCEEEecCCHH--------------HHHHHHH----CCCC
Confidence 345688999998887422 22 4677778876665443321 2223332 2233
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCCh--
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-- 159 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~-- 159 (173)
+|.+=|..+.| .++ .||++ +..+ .++|++==|+|+++|+.+++...+++|+- |++-.+.
T Consensus 132 ~v~~Fpa~~~g-----G~~-------~lk~i-~~~~-----~~ipvvaiGGI~~~n~~~~l~agg~~~v~-gS~i~~~~~ 192 (214)
T 1wbh_A 132 EFKFFPAEANG-----GVK-------ALQAI-AGPF-----SQVRFCPTGGISPANYRDYLALKSVLCIG-GSWLVPADA 192 (214)
T ss_dssp EEEETTTTTTT-----HHH-------HHHHH-HTTC-----TTCEEEEBSSCCTTTHHHHHTSTTBSCEE-EGGGSCHHH
T ss_pred EEEEecCcccc-----CHH-------HHHHH-hhhC-----CCCeEEEECCCCHHHHHHHHhcCCCeEEE-eccccChhh
Confidence 55565622221 133 33332 2222 26999999999999999999988999999 8876652
Q ss_pred ---H-HHHHHHHHh
Q 039862 160 ---E-FIDIIKSAT 169 (173)
Q Consensus 160 ---~-f~~Ii~~~~ 169 (173)
. |..|-+.+.
T Consensus 193 ~~~~~~~~i~~~a~ 206 (214)
T 1wbh_A 193 LEAGDYDRITKLAR 206 (214)
T ss_dssp HHHTCHHHHHHHHH
T ss_pred hhcCCHHHHHHHHH
Confidence 2 666655543
No 79
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.59 E-value=0.41 Score=40.24 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=29.7
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+-.|+|+ ++|+.+++. .+.||+.+|++-+.
T Consensus 162 ~iPViaaGGI~~~~~~~~al~-~GAdgV~vGs~~l~ 196 (332)
T 2z6i_A 162 SIPVIAAGGIADGEGAAAGFM-LGAEAVQVGTRFVV 196 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHT
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCEEEecHHHhc
Confidence 59999999998 899999887 58999999997664
No 80
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=93.49 E-value=0.09 Score=44.48 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=32.9
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCCh---H-HHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP---E-FIDIIK 166 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~---~-f~~Ii~ 166 (173)
++|+.+||+|+.....+-+-..+.|++-||++.++. + +.+++.
T Consensus 227 ~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv~e~a~ 273 (286)
T 3vk5_A 227 DQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALAEIAG 273 (286)
T ss_dssp TCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHHHHHHH
Confidence 589999999988775554445789999999999864 5 345543
No 81
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.44 E-value=1.3 Score=34.88 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=34.8
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChHHHHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 167 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~f~~Ii~~ 167 (173)
++|++==|+|+++|+.+++. .+.||+-+|++-+..++.+|-+.
T Consensus 151 ~ipvvaiGGI~~~n~~~~l~-aGa~~vavgSai~~~d~~~i~~~ 193 (207)
T 2yw3_A 151 EVRFLPTGGIKEEHLPHYAA-LPNLLAVGGSWLLQGNLEAVRAK 193 (207)
T ss_dssp TCEEEEBSSCCGGGHHHHHT-CSSBSCEEESGGGSSCHHHHHHH
T ss_pred CCcEEEeCCCCHHHHHHHHh-CCCcEEEEehhhhCCCHHHHHHH
Confidence 69999999999999999996 78999999998665335444443
No 82
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=93.35 E-value=0.3 Score=41.17 Aligned_cols=112 Identities=16% Similarity=0.208 Sum_probs=65.3
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeE
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVV 82 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ii 82 (173)
.+.+.|++.|.++... ..+ + ++...+.|+..+.-+....+. ..+.. ..-..
T Consensus 97 ~~~~~g~d~V~l~~g~-------p~~-~---~~~l~~~g~~v~~~v~s~~~a--------------~~a~~----~GaD~ 147 (326)
T 3bo9_A 97 VCIEEKVPVVTFGAGN-------PTK-Y---IRELKENGTKVIPVVASDSLA--------------RMVER----AGADA 147 (326)
T ss_dssp HHHHTTCSEEEEESSC-------CHH-H---HHHHHHTTCEEEEEESSHHHH--------------HHHHH----TTCSC
T ss_pred HHHHCCCCEEEECCCC-------cHH-H---HHHHHHcCCcEEEEcCCHHHH--------------HHHHH----cCCCE
Confidence 4567889998885532 222 2 344455788777656432211 11221 11123
Q ss_pred EEEcccccccC-CCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 83 LAYEPVWAIGT-GKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 83 IAYEPvwAIGt-G~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
|.+++..+-|. |..++.+.+.+ +++. -++||+-.|+|+ ++|+.+.+. .+.||+.||++-+.
T Consensus 148 i~v~g~~~GG~~G~~~~~~ll~~----i~~~----------~~iPviaaGGI~~~~dv~~al~-~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 148 VIAEGMESGGHIGEVTTFVLVNK----VSRS----------VNIPVIAAGGIADGRGMAAAFA-LGAEAVQMGTRFVA 210 (326)
T ss_dssp EEEECTTSSEECCSSCHHHHHHH----HHHH----------CSSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHT
T ss_pred EEEECCCCCccCCCccHHHHHHH----HHHH----------cCCCEEEECCCCCHHHHHHHHH-hCCCEEEechHHHc
Confidence 44555555553 64443333322 2221 258999999998 899988887 68999999997653
No 83
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=93.10 E-value=0.13 Score=41.32 Aligned_cols=44 Identities=14% Similarity=0.097 Sum_probs=29.8
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCC-h-HHHHHHHHH
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~-~-~f~~Ii~~~ 168 (173)
++|++.+|+|+. +++.+++. .++||++||++-+. + .|.++.+.+
T Consensus 200 ~ipvia~GGI~~~ed~~~~~~-~Gadgv~vgsal~~~~~~~~~~~~~l 246 (266)
T 2w6r_A 200 TLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDMRELKEYL 246 (266)
T ss_dssp CSCEEEESCCCSHHHHHHHHH-HTCSEEEESTTTC-------------
T ss_pred CCCEEEeCCCCCHHHHHHHHH-cCCHHHHccHHHHcCCCCHHHHHHHH
Confidence 599999999995 99999885 79999999999886 3 266655543
No 84
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=92.91 E-value=1.8 Score=34.72 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=71.6
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
++..+.|++++..|+.. .+. ++.+.+.|+..|.-+... .|+..++. ..-.
T Consensus 92 ~~A~~aGAd~v~~p~~d--------~~v----~~~~~~~g~~~i~G~~t~--------------~e~~~A~~----~Gad 141 (225)
T 1mxs_A 92 AAVEAAGAQFVVTPGIT--------EDI----LEAGVDSEIPLLPGISTP--------------SEIMMGYA----LGYR 141 (225)
T ss_dssp HHHHHHTCSSEECSSCC--------HHH----HHHHHHCSSCEECEECSH--------------HHHHHHHT----TTCC
T ss_pred HHHHHCCCCEEEeCCCC--------HHH----HHHHHHhCCCEEEeeCCH--------------HHHHHHHH----CCCC
Confidence 34567899999777632 222 466777887665433222 12223332 2234
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH-
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE- 160 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~- 160 (173)
+|.+=|..+.| -.+.||++ +..+ .++|++==|+|+++|+.+++...++||+- |++-.+.+
T Consensus 142 ~vk~FPa~~~~------------G~~~lk~i-~~~~-----~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~-gSai~~~~~ 202 (225)
T 1mxs_A 142 RFKLFPAEISG------------GVAAIKAF-GGPF-----GDIRFCPTGGVNPANVRNYMALPNVMCVG-TTWMLDSSW 202 (225)
T ss_dssp EEEETTHHHHT------------HHHHHHHH-HTTT-----TTCEEEEBSSCCTTTHHHHHHSTTBCCEE-ECTTSCHHH
T ss_pred EEEEccCcccc------------CHHHHHHH-HhhC-----CCCeEEEECCCCHHHHHHHHhccCCEEEE-EchhcCchh
Confidence 56665611110 03444443 2222 36999999999999999999989999999 88777632
Q ss_pred -----HHHHHHHHh
Q 039862 161 -----FIDIIKSAT 169 (173)
Q Consensus 161 -----f~~Ii~~~~ 169 (173)
|..|-+.+.
T Consensus 203 i~~~~~~~i~~~a~ 216 (225)
T 1mxs_A 203 IKNGDWARIEACSA 216 (225)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred hccCCHHHHHHHHH
Confidence 666655543
No 85
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.91 E-value=0.43 Score=41.89 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=27.3
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+--|+| +++++...+. .+.||+.+|++-+
T Consensus 246 ~IPVIA~GGI~~~~di~kala-lGAd~V~vGt~f~ 279 (400)
T 3ffs_A 246 GIPIIADGGIRYSGDIGKALA-VGASSVMIGSILA 279 (400)
T ss_dssp TCCEEEESCCCSHHHHHHHHT-TTCSEEEECGGGT
T ss_pred CCCEEecCCCCCHHHHHHHHH-cCCCEEEEChHHh
Confidence 5999998887 5788888887 5999999998754
No 86
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.88 E-value=0.54 Score=40.46 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=28.3
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+-.|+| +++++.+.+. .+.||+.+|++-+.
T Consensus 207 ~iPVIA~GGI~~~~di~kala-~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 207 GIPIIADGGIRYSGDIGKALA-VGASSVMIGSILAG 241 (361)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-HTCSEEEESTTTTT
T ss_pred CCeEEEECCCCCHHHHHHHHH-cCCCEEEEChhhhc
Confidence 4999999998 6888887777 58999999997553
No 87
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=92.37 E-value=0.22 Score=40.84 Aligned_cols=44 Identities=18% Similarity=0.233 Sum_probs=37.8
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-C-----hH-HHHHHHHHh
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-K-----PE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~-----~~-f~~Ii~~~~ 169 (173)
.+|+.|||+|+..++++++ .++|-+.+|++.+ + |+ +.++++.+.
T Consensus 76 ~~pv~vgGGir~~~~~~~l--~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g 126 (260)
T 2agk_A 76 PQFLQVGGGINDTNCLEWL--KWASKVIVTSWLFTKEGHFQLKRLERLTELCG 126 (260)
T ss_dssp TTTSEEESSCCTTTHHHHT--TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHC
T ss_pred CceEEEeCCCCHHHHHHHh--cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhC
Confidence 4889999999988888888 8999999999988 4 67 778887764
No 88
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=92.12 E-value=0.21 Score=39.96 Aligned_cols=44 Identities=18% Similarity=0.233 Sum_probs=33.6
Q ss_pred cceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC-hH-HHHHHHHH
Q 039862 124 STRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~ 168 (173)
++|++++|+++... +.+++ ..++|++.+|++.+. |+ +.++.+.+
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~l-~~Gad~V~ig~~~l~dp~~~~~~~~~~ 125 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEAF-LRGADKVSINTAAVENPSLITQIAQTF 125 (247)
T ss_dssp CSCEEEESCCCSHHHHHHHH-HTTCSEECCSHHHHHCTHHHHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHH-HcCCCeeehhhHHhhChHHHHHHHHHh
Confidence 59999999998644 55555 468999999999984 76 56666554
No 89
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=91.79 E-value=0.1 Score=43.75 Aligned_cols=45 Identities=20% Similarity=0.329 Sum_probs=37.0
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~ 168 (173)
++||+..|+| +++.+.+++...++|||.+|++.+. |. |..+.+.+
T Consensus 183 ~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~ 230 (318)
T 1vhn_A 183 RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFL 230 (318)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHH
Confidence 6999998998 6777888888779999999998885 77 77766543
No 90
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=91.36 E-value=0.13 Score=44.01 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=34.3
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKS 167 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~ 167 (173)
++||+..|+| +++.+.+++. ++|||.||++.+. |. |.++.+.
T Consensus 197 ~iPVianGgI~s~eda~~~l~--GaD~V~iGRa~l~~P~l~~~i~~~ 241 (350)
T 3b0p_A 197 QLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRR 241 (350)
T ss_dssp TSEEEEESSCCSHHHHHHHHT--TSSEEEECHHHHHCGGGGTTHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHh--CCCEEEECHHHHhCcHHHHHHHHH
Confidence 5999999998 6788888886 8999999998884 76 6666544
No 91
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=90.16 E-value=0.63 Score=37.64 Aligned_cols=45 Identities=22% Similarity=0.439 Sum_probs=35.8
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCC-hHH-HHHHHHHh
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-PEF-IDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~-~~f-~~Ii~~~~ 169 (173)
.+|+.|||+|+. ++++.+++ .++|=+.+|+++++ |+| .++++.+.
T Consensus 75 ~~pl~vGGGIrs~e~~~~~l~-~GadkVii~t~a~~~p~li~e~~~~~g 122 (243)
T 4gj1_A 75 SVNLQVGGGIRSKEEVKALLD-CGVKRVVIGSMAIKDATLCLEILKEFG 122 (243)
T ss_dssp CSEEEEESSCCCHHHHHHHHH-TTCSEEEECTTTTTCHHHHHHHHHHHC
T ss_pred CCCeEeccccccHHHHHHHHH-cCCCEEEEccccccCCchHHHHHhccc
Confidence 499999999987 55666665 89999999999986 884 57776653
No 92
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=90.04 E-value=1.3 Score=35.58 Aligned_cols=34 Identities=15% Similarity=0.294 Sum_probs=26.4
Q ss_pred cceEEEcCCCCccc-------HHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGAN-------CKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-------~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++-=|+++++| +.+++. .|+||+.+|++-+.
T Consensus 202 ~ipvva~GGi~~~~~~~~~~~~~~~~~-~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 202 PAPVVVAGGPKTNTDEEFLQMIKDAME-AGAAGVAVGRNIFQ 242 (273)
T ss_dssp SSCEEEECCSCCSSHHHHHHHHHHHHH-HTCSEEECCHHHHT
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHH-cCCcEEEeeHHhhC
Confidence 48888888888777 444443 79999999998764
No 93
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=89.82 E-value=0.19 Score=40.35 Aligned_cols=43 Identities=16% Similarity=0.137 Sum_probs=30.3
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccC----ChH-HHHHHHH
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASL----KPE-FIDIIKS 167 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl----~~~-f~~Ii~~ 167 (173)
++|++.+|+++. +.+.+++ ..++||+++|++.+ +++ +.++++.
T Consensus 74 ~iPvi~~ggi~~~~~i~~~~-~~Gad~v~lg~~~~~~~~~~~~~~~~~~~ 122 (266)
T 2w6r_A 74 TLPIIASGGAGKMEHFLEAF-LAGADKALAASVFHFREIDMRELKEYLKK 122 (266)
T ss_dssp CSCEEEESCCCSTHHHHHHH-HHTCSEEECCCCC------CHHHHHHCC-
T ss_pred CCCEEEECCCCCHHHHHHHH-HcCCcHhhhhHHHHhCCCCHHHHHHHHHH
Confidence 599999999886 4455555 47899999999998 555 6665543
No 94
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=89.71 E-value=4.3 Score=32.20 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=69.2
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCC----CeEEEEeCCCHHHHhcCChHHHHHHHHHHHHh-ccC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRG----LKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KIS 76 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~g----l~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~-~v~ 76 (173)
+++.++|++++-+ |.+-- .+.+..=++.+.+.| +.-|-|...+..+ ++..+++ ++
T Consensus 76 ~~~~~~Gad~vtV-H~~~g------~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~------------~~~~~~~~~~- 135 (221)
T 3exr_A 76 KNNAVRGADWMTC-ICSAT------IPTMKAARKAIEDINPDKGEIQVELYGDWTYD------------QAQQWLDAGI- 135 (221)
T ss_dssp HHHHTTTCSEEEE-ETTSC------HHHHHHHHHHHHHHCTTTCEEEEECCSSCCHH------------HHHHHHHTTC-
T ss_pred HHHHHcCCCEEEE-eccCC------HHHHHHHHHHHHhcCCCcceEEEEEcCCCCHH------------HHHHHHcCCH-
Confidence 3467899999888 87642 233443344444445 3445555554221 1222332 22
Q ss_pred CCCCeEEEEccccccc-CCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 77 NWDNVVLAYEPVWAIG-TGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 77 ~~~~iiIAYEPvwAIG-tG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
.. +.+.+.-.-+ .|.+.+++++..+ |+.. +.+.+|..-|+|+++|+. .+...+.|.+.+|++
T Consensus 136 --~~--~v~~~a~~~~~~Gvv~s~~e~~~i----r~~~--------~~~~~i~v~gGI~~~~~~-~~~~aGad~~VvG~~ 198 (221)
T 3exr_A 136 --SQ--AIYHQSRDALLAGETWGEKDLNKV----KKLI--------EMGFRVSVTGGLSVDTLK-LFEGVDVFTFIAGRG 198 (221)
T ss_dssp --CE--EEEECCHHHHHHTCCCCHHHHHHH----HHHH--------HHTCEEEEESSCCGGGGG-GGTTCCCSEEEECHH
T ss_pred --HH--HHHHHHHhcCCCccccCHHHHHHH----HHhh--------cCCceEEEECCCCHHHHH-HHHHCCCCEEEECch
Confidence 12 2222222111 4777888877653 4432 124778889999999976 455689999999997
Q ss_pred cCC
Q 039862 156 SLK 158 (173)
Q Consensus 156 sl~ 158 (173)
-.+
T Consensus 199 I~~ 201 (221)
T 3exr_A 199 ITE 201 (221)
T ss_dssp HHT
T ss_pred hhC
Confidence 553
No 95
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=89.45 E-value=0.29 Score=42.07 Aligned_cols=42 Identities=17% Similarity=0.304 Sum_probs=36.7
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
++||+-+|+++++++.+++..-.+|+|.+|++.+ +|+ |.++.
T Consensus 294 ~iPvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~ 337 (364)
T 1vyr_A 294 HGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQ 337 (364)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred CCCEEEECCcCHHHHHHHHHCCCccEEEECHHHHhChhHHHHHH
Confidence 5899999999999999999988899999999988 477 55554
No 96
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=89.40 E-value=0.49 Score=42.86 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=52.2
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCChH-
Q 039862 83 LAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLKPE- 160 (173)
Q Consensus 83 IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~~~- 160 (173)
|.|-.+-.=|+..-++.+.++++. +. -++||++.|+| +++.+.+++...++||+++|++.+...
T Consensus 469 il~t~~~~dG~~~G~d~~li~~l~----~~----------~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~ 534 (555)
T 1jvn_A 469 ILLNCIDKDGSNSGYDLELIEHVK----DA----------VKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEF 534 (555)
T ss_dssp EEECCGGGTTTCSCCCHHHHHHHH----HH----------CSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSC
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHH----Hh----------CCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCC
Confidence 448888777876666765555432 21 25999997777 667788888767999999999988643
Q ss_pred -HHHHHHHHh
Q 039862 161 -FIDIIKSAT 169 (173)
Q Consensus 161 -f~~Ii~~~~ 169 (173)
|.++.+.+.
T Consensus 535 ~~~e~~~~l~ 544 (555)
T 1jvn_A 535 TVNDVKEYLL 544 (555)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 777766543
No 97
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.31 E-value=0.34 Score=37.34 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=30.4
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++-.|+|+++|+.+++. .+.||+-||++-++
T Consensus 158 ~~pi~v~GGI~~~~~~~~~~-aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 158 RVPFSVAGGVKVATIPAVQK-AGAEVAVAGGAIYG 191 (207)
T ss_dssp TSCEEEESSCCGGGHHHHHH-TTCSEEEESHHHHT
T ss_pred CCCEEEECCcCHHHHHHHHH-cCCCEEEEeeeccC
Confidence 48899999999999999875 89999999998775
No 98
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=88.99 E-value=6.2 Score=32.40 Aligned_cols=122 Identities=20% Similarity=0.161 Sum_probs=65.5
Q ss_pred cchhhcCCCEEEEcccccccc-------cCC-----------CHHHHHHHHHHHHHCCCeEEEEeCCCHHHH------hc
Q 039862 2 EMLVNLSIPWVILGHSERRAL-------LNE-----------SNDFVGDKVAYALSRGLKVIACVGETLEQR------ES 57 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~-------~~E-----------~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r------~~ 57 (173)
+.||++|++.|=+.++-.+.. +++ .-+.+.+=+..|.++||.+|+.+-...... ..
T Consensus 51 ~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~~~~~~w~~~ 130 (358)
T 1ece_A 51 DQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTS 130 (358)
T ss_dssp HHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSSSCCS
T ss_pred HHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCcCC
Confidence 458999999998887643321 111 122344558999999999999885321000 01
Q ss_pred CChHHHHHHHHHHHHhccCCCCCeEEEE----ccccc--ccCCCCCC--HHHHHHHHHHHHHHHHhccchhhcCcceEEE
Q 039862 58 GSTVAVVAEQTKAIAEKISNWDNVVLAY----EPVWA--IGTGKVAT--PAQAQEVHAELRKWLKDNVSAEVAASTRIIY 129 (173)
Q Consensus 58 ~~~~~~l~~Ql~~~l~~v~~~~~iiIAY----EPvwA--IGtG~~a~--~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilY 129 (173)
....+...+-++.+..... ..+-+++| ||.-. -|++.... .+.++++++.||+. ..+.+|++
T Consensus 131 ~~~~~~~~~~~~~ia~r~~-~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~---------dp~~~v~v 200 (358)
T 1ece_A 131 SVSEATWISDLQALAQRYK-GNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSV---------NPNLLIFV 200 (358)
T ss_dssp SSCHHHHHHHHHHHHHHTT-TCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHH---------CTTSEEEE
T ss_pred CccHHHHHHHHHHHHHHhc-CCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhh---------CCCeEEEE
Confidence 1223444444444444332 23457788 45321 12222211 23456777777765 33466777
Q ss_pred cCCC
Q 039862 130 GGSV 133 (173)
Q Consensus 130 GGSV 133 (173)
||.-
T Consensus 201 ~g~~ 204 (358)
T 1ece_A 201 EGVQ 204 (358)
T ss_dssp ECBS
T ss_pred CCCc
Confidence 6643
No 99
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=88.83 E-value=0.23 Score=39.41 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=33.9
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~ 168 (173)
++|++.+|.++.....+.+...++||+.+|++.+. ++ +.++.+.+
T Consensus 75 ~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 75 FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc
Confidence 59999999998655444444468999999999985 66 67777665
No 100
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=88.73 E-value=0.67 Score=37.47 Aligned_cols=70 Identities=19% Similarity=0.078 Sum_probs=41.9
Q ss_pred EcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCCh--HHH
Q 039862 85 YEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP--EFI 162 (173)
Q Consensus 85 YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~--~f~ 162 (173)
|=-+.-=||..=++.+.++.+.+. ..++|++|.|+|..-+.-+-++ ..++|+++|+|-+.- ++.
T Consensus 170 ~t~Id~DGt~~G~d~~l~~~l~~~-------------~~~ipviasGGv~~~~Dl~~l~-~~~~gvivg~Al~~g~i~l~ 235 (243)
T 4gj1_A 170 CTDISKDGTMQGVNVRLYKLIHEI-------------FPNICIQASGGVASLKDLENLK-GICSGVIVGKALLDGVFSVE 235 (243)
T ss_dssp EEETTC-----CCCHHHHHHHHHH-------------CTTSEEEEESCCCSHHHHHHTT-TTCSEEEECHHHHTTSSCHH
T ss_pred eeeecccccccCCCHHHHHHHHHh-------------cCCCCEEEEcCCCCHHHHHHHH-ccCchhehHHHHHCCCCCHH
Confidence 556777888888888766553322 2358999999987654333333 459999999986553 255
Q ss_pred HHHHHH
Q 039862 163 DIIKSA 168 (173)
Q Consensus 163 ~Ii~~~ 168 (173)
+.++.+
T Consensus 236 ea~~~l 241 (243)
T 4gj1_A 236 EGIRCL 241 (243)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555543
No 101
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=88.47 E-value=0.66 Score=37.98 Aligned_cols=78 Identities=10% Similarity=0.076 Sum_probs=45.6
Q ss_pred EEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCc-ccHHHHhcCC-CCCEEEeeccc--C
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNG-ANCKELAAQP-DVDGFLVGGAS--L 157 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~-~n~~~~~~~~-~vDG~LiG~as--l 157 (173)
-|.|=++-.=|+..-++.+.++++.+.... ..++||+++|+|.. +.+.+++... ++||+++|+|. +
T Consensus 173 ~il~t~i~~dG~~~G~d~eli~~l~~~~~~----------~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~ 242 (260)
T 2agk_A 173 EFLIHAADVEGLCGGIDELLVSKLFEWTKD----------YDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIF 242 (260)
T ss_dssp EEEEEC-------CCCCHHHHHHHHHHHTT----------CSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGG
T ss_pred EEEEEeeccccCcCCCCHHHHHHHHHhhcc----------cCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHc
Confidence 344666666676655676666554322100 11599999888865 6677777654 89999999996 4
Q ss_pred C-h-H-HHHHHHHHh
Q 039862 158 K-P-E-FIDIIKSAT 169 (173)
Q Consensus 158 ~-~-~-f~~Ii~~~~ 169 (173)
. + - |.++++...
T Consensus 243 ~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 243 GGNLVKFEDCCRWNE 257 (260)
T ss_dssp TCSSBCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
Confidence 3 4 3 777766543
No 102
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=88.47 E-value=0.57 Score=38.15 Aligned_cols=69 Identities=12% Similarity=0.049 Sum_probs=44.3
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
-.+|..=|+|.-.|..-+.+.. .+.++++.. .. ..++|++--|+|+++|+.+++. .++||+.||++-+.
T Consensus 156 aDyI~vgpvf~T~tK~~~~~~g----l~~l~~~~~-~~----~~~iPvvAiGGI~~~ni~~~~~-aGa~gvav~sai~~ 224 (243)
T 3o63_A 156 ADYFCVGPCWPTPTKPGRAAPG----LGLVRVAAE-LG----GDDKPWFAIGGINAQRLPAVLD-AGARRIVVVRAITS 224 (243)
T ss_dssp CSEEEECCSSCCCC-----CCC----HHHHHHHHT-C-------CCCEEEESSCCTTTHHHHHH-TTCCCEEESHHHHT
T ss_pred CCEEEEcCccCCCCCCCcchhh----HHHHHHHHH-hc----cCCCCEEEecCCCHHHHHHHHH-cCCCEEEEeHHHhC
Confidence 4588899998765543211111 223333321 10 1358999999999999998887 89999999998774
No 103
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=88.45 E-value=0.44 Score=40.23 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=37.8
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~~~ 168 (173)
++||+-+|++ +++.+.+++..-.+|++.+|++.+ +|+ +.++.+..
T Consensus 277 ~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~ 324 (338)
T 1z41_A 277 DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQL 324 (338)
T ss_dssp CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHT
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCC
Confidence 4899999999 789999999987799999999988 477 66665544
No 104
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=88.31 E-value=0.34 Score=38.44 Aligned_cols=45 Identities=18% Similarity=0.319 Sum_probs=34.9
Q ss_pred cceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC-hH-HHHHHHHHh
Q 039862 124 STRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK-PE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~~ 169 (173)
++|++.+|.++... +.+++. .++||+.+|++.+. ++ +.++++.+.
T Consensus 74 ~ipvi~~ggI~~~~~~~~~~~-~Gad~V~lg~~~l~~p~~~~~~~~~~g 121 (253)
T 1thf_D 74 DIPFTVGGGIHDFETASELIL-RGADKVSINTAAVENPSLITQIAQTFG 121 (253)
T ss_dssp CSCEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHHCTHHHHHHHHHHC
T ss_pred CCCEEEeCCCCCHHHHHHHHH-cCCCEEEEChHHHhChHHHHHHHHHcC
Confidence 59999999998644 555554 68999999999885 66 778877653
No 105
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=88.10 E-value=0.33 Score=41.95 Aligned_cols=42 Identities=14% Similarity=0.255 Sum_probs=36.5
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
++||+-.|+++++.+.+++..-.+|+|.+|++.+ +|+ |.++.
T Consensus 299 ~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~ 342 (377)
T 2r14_A 299 KGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANPDLPERFR 342 (377)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred CCCEEEECCCCHHHHHHHHHCCCceEEeecHHHHhCchHHHHHH
Confidence 4899999999999999999988899999999988 477 55554
No 106
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=87.98 E-value=6.6 Score=31.58 Aligned_cols=50 Identities=8% Similarity=0.064 Sum_probs=37.1
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.||++|++.|=+.|++.-.+-.+.-+.+.+=+..|.++||.+|+.+-..
T Consensus 38 ~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~ 87 (294)
T 2whl_A 38 PAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHDA 87 (294)
T ss_dssp HHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 46899999999888875322323344556666899999999999988754
No 107
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=87.84 E-value=0.45 Score=36.23 Aligned_cols=45 Identities=13% Similarity=0.067 Sum_probs=34.2
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC-h-HHHHHHHHHh
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK-P-EFIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~-~-~f~~Ii~~~~ 169 (173)
++|++.+|+++ +++..+.+. .++||+++|++-+. + .|.++.+.+.
T Consensus 174 ~~Pvia~~g~~~~~~~~~~~~-~G~~~~~vg~a~~~~~~~~~~~~~~l~ 221 (237)
T 3cwo_X 174 TLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDVRELKEYLK 221 (237)
T ss_dssp CSCEEEESCCCSHHHHHHHHH-HTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred CCCEEecCCCCCHHHHHHHHH-cCcHHHhhhHHHHcCCCCHHHHHHHHH
Confidence 68899876665 678888876 79999999998754 3 3777766554
No 108
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=87.80 E-value=0.29 Score=40.44 Aligned_cols=44 Identities=27% Similarity=0.307 Sum_probs=35.5
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC--ChH-HHHHHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL--KPE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl--~~~-f~~Ii~~~ 168 (173)
++||+..|+| +++.+.+++. .+.|++.||++.+ +|. |.+|.+..
T Consensus 242 ~ipvi~~GGI~~~~da~~~l~-~GAd~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 242 EIQIIGTGGIETGQDAFEHLL-CGATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-HTCSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCEEEEchHHHhcCcHHHHHHHHHH
Confidence 6999999999 5677888775 6899999999988 476 76766554
No 109
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=87.77 E-value=3.7 Score=35.40 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=28.1
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+-.|+| ++.++.+.+. .+.||+.+|++-+
T Consensus 211 ~iPVIA~GGI~~~~di~kala-~GAd~V~vGs~f~ 244 (366)
T 4fo4_A 211 GIPVIADGGIRFSGDISKAIA-AGASCVMVGSMFA 244 (366)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESTTTT
T ss_pred CCeEEEeCCCCCHHHHHHHHH-cCCCEEEEChHhh
Confidence 5999998888 7888888887 4899999999755
No 110
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=87.73 E-value=0.49 Score=40.24 Aligned_cols=46 Identities=15% Similarity=0.131 Sum_probs=37.9
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHHHHh
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~~~~ 169 (173)
++||+-+|++ +++.+.+++..-.+|+|.+|++.+ +|+ +.++.+.+.
T Consensus 277 ~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCC
Confidence 4899999998 578899999877799999999988 588 667766543
No 111
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=87.56 E-value=0.42 Score=41.06 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=36.4
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
++||+-.|+++++++.+++..-.+|+|.+|++.+ +|+ |.++.
T Consensus 293 ~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~ 336 (365)
T 2gou_A 293 QGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANPDLPERLR 336 (365)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHH
T ss_pred CCcEEEeCCCCHHHHHHHHHCCCcceehhcHHHHhCchHHHHHH
Confidence 4899999999999999999988899999999988 477 55554
No 112
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=87.53 E-value=0.75 Score=39.07 Aligned_cols=46 Identities=20% Similarity=0.159 Sum_probs=38.0
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHHHHh
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~~~~ 169 (173)
++||+-+|++ +++++.+++..-.+|+|.+|++.+ +|+ +.++.+.+.
T Consensus 288 ~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 288 GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTT
T ss_pred CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCC
Confidence 4899999998 588999999987899999999988 487 666666543
No 113
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=87.16 E-value=2 Score=35.92 Aligned_cols=52 Identities=12% Similarity=0.224 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.+|+++.++++.++.. ...+++.-=|+|+++|+.+++. .++|++-+|++-.+
T Consensus 222 ~~~e~l~~av~~l~~~---------~~~v~ieASGGIt~eni~~~a~-tGVD~IsvGslt~s 273 (285)
T 1o4u_A 222 LSPEEVKDISRRIKDI---------NPNVIVEVSGGITEENVSLYDF-ETVDVISSSRLTLQ 273 (285)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTSEEEEEECCCTTTGGGGCC-TTCCEEEEGGGTSS
T ss_pred CCHHHHHHHHHHhhcc---------CCCceEEEECCCCHHHHHHHHH-cCCCEEEEeHHHcC
Confidence 5899999888887643 2358899999999999999875 88999999996544
No 114
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=87.06 E-value=0.45 Score=39.51 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=30.0
Q ss_pred cceEE--EcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRII--YGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~il--YGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+ ..|+| +++|+.+++. .++||++||++-+.
T Consensus 207 ~iPvi~~a~GGI~~~~d~~~~~~-~GadgV~vGsai~~ 243 (305)
T 2nv1_A 207 KLPVVNFAAGGVATPADAALMMQ-LGADGVFVGSGIFK 243 (305)
T ss_dssp SCSSCEEBCSCCCSHHHHHHHHH-TTCSCEEECGGGGG
T ss_pred CCCEEEEeccCCCCHHHHHHHHH-cCCCEEEEcHHHHc
Confidence 58888 89999 9999999886 79999999999883
No 115
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=87.01 E-value=7 Score=33.08 Aligned_cols=50 Identities=10% Similarity=0.066 Sum_probs=37.3
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.|++.|++.|=+-|++.-.+-.+.-+.+.+=+..|.++||.+|+.+-..
T Consensus 61 ~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~ 110 (345)
T 3jug_A 61 PAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVEVHDA 110 (345)
T ss_dssp HHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 35889999999888875432323344556666899999999999998764
No 116
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=86.95 E-value=0.48 Score=41.32 Aligned_cols=43 Identities=23% Similarity=0.217 Sum_probs=36.8
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIK 166 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~ 166 (173)
++||+..|.++++.+.+++..-.+|+|.+|++.+ +|+ |.++.+
T Consensus 319 ~iPvi~~G~i~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 319 QGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp SSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHCCCCceeeecHHHHhCchHHHHHHh
Confidence 4899999999999999999988899999999988 587 555543
No 117
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=86.54 E-value=0.69 Score=39.55 Aligned_cols=46 Identities=15% Similarity=0.045 Sum_probs=38.2
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHHHHh
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~~~~ 169 (173)
++||+-+|++ +++.+.+++..-.+|+|.+|++.+ +|+ +.++.+.+.
T Consensus 295 ~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 295 KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 4899999999 588899999987899999999988 487 666666554
No 118
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=86.45 E-value=0.57 Score=39.57 Aligned_cols=31 Identities=13% Similarity=0.283 Sum_probs=25.3
Q ss_pred cCcceEEEcCCCCcccHHHHhcCCCCCEEEe
Q 039862 122 AASTRIIYGGSVNGANCKELAAQPDVDGFLV 152 (173)
Q Consensus 122 ~~~i~ilYGGSV~~~n~~~~~~~~~vDG~Li 152 (173)
+..++|+-||+|+++|+.+++...+++-+=.
T Consensus 207 ~~rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 207 KGRIVVMPGGGITDRNLQRILEGSGATEFHC 237 (287)
T ss_dssp TTSSEEEECTTCCTTTHHHHHHHHCCSEEEE
T ss_pred CCCCEEEECCCcCHHHHHHHHHhhCCCEEeE
Confidence 3469999999999999999988667665543
No 119
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=86.37 E-value=0.35 Score=39.59 Aligned_cols=44 Identities=27% Similarity=0.305 Sum_probs=35.7
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~ 168 (173)
++||+..|+| +++++.+++. .+.|++.+|++.+. ++ |.++.+..
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~-~GAd~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYM-AGASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHH-HTCSEEEECTHHHHCTTHHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHH-cCCCEEEECHHHHcCcHHHHHHHHHH
Confidence 5999999999 6888998887 67999999998874 65 66666544
No 120
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=86.09 E-value=0.79 Score=38.79 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=28.1
Q ss_pred cceEEE--cCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIY--GGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilY--GGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+- -|.| +|+++...+ +.++||++||++.+.
T Consensus 198 ~IPVV~IAnGGI~TpedA~~~l-e~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 198 KLPVVNFAAGGVATPADAALLM-QLGCDGVFVGSGIFK 234 (291)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHH-HTTCSCEEECGGGGG
T ss_pred CCCEEEecCCCCCCHHHHHHHH-HhCCCEEEEchHHhC
Confidence 478753 4555 899999999 679999999999886
No 121
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=85.73 E-value=12 Score=30.15 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=33.2
Q ss_pred cchhhcCCCEEEEccccccc-------ccCCC-HHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRA-------LLNES-NDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~-------~~~E~-~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.|+++|++.|=+.-+=.+. .+++. -+.+.+=+..|.++||.+|+.+-..
T Consensus 40 ~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~ 97 (317)
T 3aof_A 40 DIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHY 97 (317)
T ss_dssp HHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred HHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 35789999999876331111 01111 2345566899999999999999654
No 122
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=85.67 E-value=1.7 Score=36.41 Aligned_cols=52 Identities=17% Similarity=0.107 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.+|+++.++++.++.. ..++++.-=|+|+++|+.++.. .+||++-+|+.-.+
T Consensus 223 ~~~~~~~~~v~~l~~~---------~~~v~ieaSGGIt~~~i~~~a~-tGVD~isvG~l~~~ 274 (284)
T 1qpo_A 223 FAVWQTQTAVQRRDSR---------APTVMLESSGGLSLQTAATYAE-TGVDYLAVGALTHS 274 (284)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTCEEEEESSCCTTTHHHHHH-TTCSEEECGGGTSS
T ss_pred CCHHHHHHHHHHhhcc---------CCCeEEEEECCCCHHHHHHHHh-cCCCEEEECHHHcC
Confidence 5789999888887653 2358899999999999999987 78999999985443
No 123
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=85.64 E-value=0.73 Score=39.70 Aligned_cols=43 Identities=9% Similarity=0.044 Sum_probs=36.2
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIK 166 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~ 166 (173)
++||+-.|+++++.+.+++..-.+|+|.+|++.+ +|+ +.++.+
T Consensus 287 ~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~ 331 (361)
T 3gka_A 287 GGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIANPDLPRRFKL 331 (361)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHh
Confidence 4788888888999999999988899999999988 587 555544
No 124
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=85.34 E-value=0.46 Score=39.09 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=29.3
Q ss_pred cceEE--EcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRII--YGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~il--YGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++ -.|+| +++|+.+++. .++||+.||++-++
T Consensus 207 ~~pvi~~a~GGI~~~e~i~~~~~-aGadgvvvGsai~~ 243 (297)
T 2zbt_A 207 RLPVVNFAAGGIATPADAALMMH-LGMDGVFVGSGIFK 243 (297)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHH-TTCSEEEECGGGGG
T ss_pred CCCcEEEeeCCCCCHHHHHHHHH-cCCCEEEEchHHhC
Confidence 47777 88899 9999999887 59999999999873
No 125
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=84.88 E-value=0.69 Score=39.87 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=36.1
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIK 166 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~ 166 (173)
++||+-.|+++++.+.+++..-.+|+|.+|++.+ +|+ +.++.+
T Consensus 279 ~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~ 323 (362)
T 4ab4_A 279 GGPYIVNERFDKASANAALASGKADAVAFGVPFIANPDLPARLAA 323 (362)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHT
T ss_pred CCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHc
Confidence 4789888888999999999988899999999988 587 555543
No 126
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=84.33 E-value=14 Score=29.75 Aligned_cols=49 Identities=10% Similarity=-0.030 Sum_probs=35.1
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
+.||++|++.|=+-|+..-.+-...-+.+.+-+..|.++||.+|+.+-.
T Consensus 39 ~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~ 87 (302)
T 1bqc_A 39 ADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHD 87 (302)
T ss_dssp HHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred HHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3689999999988876421111222345666689999999999999864
No 127
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.33 E-value=1.9 Score=33.62 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=48.8
Q ss_pred eEEEEcccccccC----CCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeeccc
Q 039862 81 VVLAYEPVWAIGT----GKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 81 iiIAYEPvwAIGt----G~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~as 156 (173)
.+|.+-|++.-+| +.+.+++.+..+ ++. + ..++|++-=|+|+++|+.+++. .+.||+-|+++-
T Consensus 109 Dyv~~g~vf~t~sk~~~~~~~g~~~l~~~----~~~----~----~~~iPviaiGGI~~~nv~~~~~-~Ga~gVav~s~i 175 (210)
T 3ceu_A 109 DYVFMSPIYDSISKVNYYSTYTAEELREA----QKA----K----IIDSKVMALGGINEDNLLEIKD-FGFGGAVVLGDL 175 (210)
T ss_dssp SEEEECCCC---------CCCCHHHHHHH----HHT----T----CSSTTEEEESSCCTTTHHHHHH-TTCSEEEESHHH
T ss_pred CEEEECCcCCCCCCCCCCCCCCHHHHHHH----HHh----c----CCCCCEEEECCCCHHHHHHHHH-hCCCEEEEhHHh
Confidence 4677788876554 233455554332 111 0 0358999999999999999997 899999999976
Q ss_pred CC---h----HHHHHHHHHh
Q 039862 157 LK---P----EFIDIIKSAT 169 (173)
Q Consensus 157 l~---~----~f~~Ii~~~~ 169 (173)
++ + .|.+.++...
T Consensus 176 ~~~~d~~~~~~~~~~v~~~~ 195 (210)
T 3ceu_A 176 WNKFDACLDQNYLAVIEHFK 195 (210)
T ss_dssp HTTCCTTTSSCCHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHH
Confidence 54 2 2767666643
No 128
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=84.11 E-value=0.54 Score=36.19 Aligned_cols=34 Identities=29% Similarity=0.256 Sum_probs=30.3
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++--|+|+++|+.+++. .+.||+.+|++-+.
T Consensus 150 ~~pvia~GGI~~~~~~~~~~-~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 150 NVKFVPTGGVNLDNVCEWFK-AGVLAVGVGSALVK 183 (205)
T ss_dssp TCEEEEBSSCCTTTHHHHHH-HTCSCEEECHHHHC
T ss_pred CCcEEEcCCCCHHHHHHHHH-CCCCEEEECccccC
Confidence 69999999999999999886 68999999997654
No 129
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=83.97 E-value=2 Score=38.91 Aligned_cols=71 Identities=21% Similarity=0.177 Sum_probs=50.3
Q ss_pred CeEEEEcccccccCCCCCC-----HHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcC-------CCC
Q 039862 80 NVVLAYEPVWAIGTGKVAT-----PAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQ-------PDV 147 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~-----~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~-------~~v 147 (173)
-.+|..=|+|.-.|...+. ++.++++.+.+++ . + ..++|++-=|+|+++|+.+++.. .++
T Consensus 132 aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~----~-~---~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~Ga 203 (540)
T 3nl6_A 132 VDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALER----N-N---AHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSL 203 (540)
T ss_dssp CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHH----T-T---CTTCEEEEESSCCTTTHHHHHHHCBCTTSSCBC
T ss_pred CCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHh----h-c---cCCCCEEEEcCCCHHHHHHHHHhhcccccccCc
Confidence 4689999999887665432 5555554444322 1 0 23699999899999999999862 789
Q ss_pred CEEEeecccCC
Q 039862 148 DGFLVGGASLK 158 (173)
Q Consensus 148 DG~LiG~asl~ 158 (173)
||+-|+++-+.
T Consensus 204 dgvAVvsaI~~ 214 (540)
T 3nl6_A 204 DGICVVSDIIA 214 (540)
T ss_dssp SCEEESHHHHT
T ss_pred eEEEEeHHHhc
Confidence 99999998774
No 130
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=83.95 E-value=0.79 Score=39.63 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=36.4
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
++||+-+|+++++.+.+++..-.+|+|.+|++.+ +|+ +.++.
T Consensus 307 ~iPvi~~G~it~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~ 350 (379)
T 3aty_A 307 SGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQ 350 (379)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred CCcEEEECCCCHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHH
Confidence 4899999999999999999988899999999988 587 55554
No 131
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=83.67 E-value=3.2 Score=34.74 Aligned_cols=74 Identities=20% Similarity=0.273 Sum_probs=50.9
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEE
Q 039862 64 VAEQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRII 128 (173)
Q Consensus 64 l~~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il 128 (173)
|..+++..+..+...++.+|.|+|.| .+.++..|+|.++.++.+.||+. +++++
T Consensus 175 Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~-----------~v~~I 243 (307)
T 3ujp_A 175 IDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTN-----------NVPTI 243 (307)
T ss_dssp HHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTT-----------TCSEE
T ss_pred HHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhc-----------CCcEE
Confidence 33334444443322346778888865 45678889999999999998863 46655
Q ss_pred E-cCCCCcccHHHHhcCCCCC
Q 039862 129 Y-GGSVNGANCKELAAQPDVD 148 (173)
Q Consensus 129 Y-GGSV~~~n~~~~~~~~~vD 148 (173)
+ =-.++++.++.+++..++.
T Consensus 244 f~e~~~~~k~~~~ia~e~g~~ 264 (307)
T 3ujp_A 244 FCESTVSDKGQKQVAQATGAR 264 (307)
T ss_dssp EEETTSCSHHHHHTTTTTCCE
T ss_pred EEeCCCChHHHHHHHHHhCCc
Confidence 4 5567777788888888765
No 132
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=83.58 E-value=0.36 Score=38.30 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=32.5
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~ 168 (173)
++|++.+|+++.....+.+...++||+.+|++.+. |+ |.++ +.+
T Consensus 73 ~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~~ 118 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-REI 118 (241)
T ss_dssp GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HTT
T ss_pred CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HHc
Confidence 48999999998755444344478999999999885 66 6666 544
No 133
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=83.20 E-value=1.5 Score=34.50 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=34.4
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHHh
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~~ 169 (173)
++|++.+|.|+. +.+.+++. .++|++.+|...+. ++ +.++++.+.
T Consensus 75 ~ipv~v~ggI~~~~~~~~~l~-~Gad~V~lg~~~l~~p~~~~~~~~~~g 122 (244)
T 1vzw_A 75 DIKVELSGGIRDDDTLAAALA-TGCTRVNLGTAALETPEWVAKVIAEHG 122 (244)
T ss_dssp SSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHHCHHHHHHHHHHHG
T ss_pred CCcEEEECCcCCHHHHHHHHH-cCCCEEEECchHhhCHHHHHHHHHHcC
Confidence 589999998885 44555555 78999999998885 66 777777654
No 134
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=83.09 E-value=1.2 Score=36.35 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=66.8
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEE--eCCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIAC--VGETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlC--vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
.+++++|++++.+|=--. -++-|....+++-.+. .|+...+- ++.... .+..+. .+||... + ..
T Consensus 83 ~~~~~~GadGvV~G~Lt~---dg~iD~~~~~~Li~~a-~~~~vTFHRAFD~~~~----~d~~~a-le~L~~l--G---v~ 148 (224)
T 2bdq_A 83 LRAVELESDALVLGILTS---NNHIDTEAIEQLLPAT-QGLPLVFHMAFDVIPK----SDQKKS-IDQLVAL--G---FT 148 (224)
T ss_dssp HHHHHTTCSEEEECCBCT---TSSBCHHHHHHHHHHH-TTCCEEECGGGGGSCT----TTHHHH-HHHHHHT--T---CC
T ss_pred HHHHHcCCCEEEEeeECC---CCCcCHHHHHHHHHHh-CCCeEEEECchhccCC----cCHHHH-HHHHHHc--C---CC
Confidence 468899999999997644 2455555555655443 47776651 222100 011111 1222221 2 23
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEe
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLV 152 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~Li 152 (173)
++.= +|..++ .-+.+-...|++++... +..+.|+-||+|+++|+.++....+++-+=.
T Consensus 149 rILT---------SG~~~~-~~a~~g~~~L~~Lv~~a-----~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~ 206 (224)
T 2bdq_A 149 RILL---------HGSSNG-EPIIENIKHIKALVEYA-----NNRIEIMVGGGVTAENYQYICQETGVKQAHG 206 (224)
T ss_dssp EEEE---------CSCSSC-CCGGGGHHHHHHHHHHH-----TTSSEEEECSSCCTTTHHHHHHHHTCCEEEE
T ss_pred EEEC---------CCCCCC-CcHHHHHHHHHHHHHhh-----CCCeEEEeCCCCCHHHHHHHHHhhCCCEEcc
Confidence 3321 344433 11222334455544321 3469999999999999999997778876654
No 135
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=82.82 E-value=1.8 Score=37.23 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=27.9
Q ss_pred cceEE--EcCCC-CcccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRII--YGGSV-NGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~il--YGGSV-~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
.+|++ -=|+| +++|+..++.. ++||++||++.+
T Consensus 240 ~IPVV~VAeGGI~Tpeda~~~l~~-GaDgV~VGsaI~ 275 (330)
T 2yzr_A 240 RLPVVNFAAGGVATPADAALMMQL-GSDGVFVGSGIF 275 (330)
T ss_dssp SCSSEEEECSCCCSHHHHHHHHHT-TCSCEEESHHHH
T ss_pred CCCeEEEEECCCCCHHHHHHHHHc-CcCEEeeHHHHh
Confidence 57885 45666 79999999986 999999999886
No 136
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=82.80 E-value=0.92 Score=37.40 Aligned_cols=44 Identities=18% Similarity=0.152 Sum_probs=35.6
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC--ChH-HHHHHHHH
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL--KPE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl--~~~-f~~Ii~~~ 168 (173)
++||+..|+|. ++++.+++. .+.|++.||++.+ +|. |.+|.+..
T Consensus 244 ~ipvi~~GGI~~~~da~~~l~-~GAd~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 244 DKLVFGCGGVYSGEDAFLHIL-AGASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-HTCSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCEEEEchhhHhcCcHHHHHHHHHH
Confidence 59999999996 778888875 6899999999988 466 66666554
No 137
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=82.71 E-value=1.7 Score=34.17 Aligned_cols=45 Identities=18% Similarity=0.280 Sum_probs=34.7
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHHh
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~~ 169 (173)
++|++.+|.|.. +.+.+++. .++|++.+|.+.+. ++ +.++++.+.
T Consensus 74 ~ipv~v~ggi~~~~~~~~~l~-~Gad~V~lg~~~l~~p~~~~~~~~~~g 121 (244)
T 2y88_A 74 DVQVELSGGIRDDESLAAALA-TGCARVNVGTAALENPQWCARVIGEHG 121 (244)
T ss_dssp SSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHHCHHHHHHHHHHHG
T ss_pred CCcEEEECCCCCHHHHHHHHH-cCCCEEEECchHhhChHHHHHHHHHcC
Confidence 589999888875 44555555 78999999999885 66 777777654
No 138
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=82.68 E-value=2.3 Score=35.11 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeeccc
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~as 156 (173)
.+|+++.++++.++.. ..+++|.-=|+|+++|+.+++. .++|++=+|++-
T Consensus 211 ~~~~~l~~~v~~l~~~---------~~~~~i~AsGGI~~~ni~~~~~-aGaD~i~vGs~i 260 (273)
T 2b7n_A 211 LSVLETKEIAAYRDAH---------YPFVLLEASGNISLESINAYAK-SGVDAISVGALI 260 (273)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTCEEEEESSCCTTTHHHHHT-TTCSEEECTHHH
T ss_pred CCHHHHHHHHHHhhcc---------CCCcEEEEECCCCHHHHHHHHH-cCCcEEEEcHHh
Confidence 4688888877766542 2358999999999999999987 789999999853
No 139
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=82.66 E-value=0.71 Score=39.82 Aligned_cols=43 Identities=12% Similarity=0.102 Sum_probs=36.9
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChH-HHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPE-FIDIIK 166 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii~ 166 (173)
++||+-+|.++++.+.+++..-.+|+|.+|++.+ +|+ |.++.+
T Consensus 301 ~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~ 345 (376)
T 1icp_A 301 KGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFEL 345 (376)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHHhCccHHHHHHc
Confidence 4899999999999999999988899999999988 587 555543
No 140
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=82.46 E-value=1.3 Score=34.56 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=66.4
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEE-Ee-CCCHHHHhcCChHHHHHHHHHHHHhccCCCCC
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIA-CV-GETLEQRESGSTVAVVAEQTKAIAEKISNWDN 80 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIl-Cv-GE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ 80 (173)
.+.++|++++-+ |.|-. .+.+..=++.+.+.|..+.+ ++ +-+... .+++... + ...
T Consensus 75 ~~~~~Gad~itv-h~~~g------~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~----------~~~l~~~--~---~~~ 132 (216)
T 1q6o_A 75 MCFEANADWVTV-ICCAD------INTAKGALDVAKEFNGDVQIELTGYWTWEQ----------AQQWRDA--G---IGQ 132 (216)
T ss_dssp HHHHTTCSEEEE-ETTSC------HHHHHHHHHHHHHTTCEEEEEECSCCCHHH----------HHHHHHT--T---CCE
T ss_pred HHHhCCCCEEEE-eccCC------HHHHHHHHHHHHHcCCCceeeeeeCCChhh----------HHHHHhc--C---cHH
Confidence 466788888766 55442 22344445666778888744 55 433110 1122221 1 112
Q ss_pred eEE-----EEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 81 VVL-----AYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 81 iiI-----AYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
+++ +.+|-. +| +++.++. +|+.+ ..++||+--|+|+++|+.+.+ ..+.|++.+|++
T Consensus 133 ~vl~~a~~~~~~G~---~g---~~~~i~~----lr~~~--------~~~~~i~v~GGI~~~~~~~~~-~aGad~ivvG~~ 193 (216)
T 1q6o_A 133 VVYHRSRDAQAAGV---AW---GEADITA----IKRLS--------DMGFKVTVTGGLALEDLPLFK-GIPIHVFIAGRS 193 (216)
T ss_dssp EEEECCHHHHHTTC---CC---CHHHHHH----HHHHH--------HTTCEEEEESSCCGGGGGGGT-TSCCSEEEESHH
T ss_pred HHHHHHHHHHhcCC---CC---CHHHHHH----HHHhc--------CCCCcEEEECCcChhhHHHHH-HcCCCEEEEeeh
Confidence 222 234421 22 5666544 45443 225789999999999988766 579999999998
Q ss_pred cCC
Q 039862 156 SLK 158 (173)
Q Consensus 156 sl~ 158 (173)
-+.
T Consensus 194 I~~ 196 (216)
T 1q6o_A 194 IRD 196 (216)
T ss_dssp HHT
T ss_pred hcC
Confidence 664
No 141
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=81.98 E-value=1.1 Score=38.14 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=34.1
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC-ChH-HHHH
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL-KPE-FIDI 164 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~I 164 (173)
++||+-.|+++ ++.+.+++..-.+|+|.+|++.+ +|+ +.++
T Consensus 277 ~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~ 320 (343)
T 3kru_A 277 NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHT 320 (343)
T ss_dssp TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHT
T ss_pred CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEE
Confidence 48999999985 78899999988899999999988 477 4443
No 142
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=81.92 E-value=3.3 Score=33.98 Aligned_cols=77 Identities=9% Similarity=0.066 Sum_probs=47.8
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEE
Q 039862 64 VAEQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRII 128 (173)
Q Consensus 64 l~~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il 128 (173)
|..+++..++.+...++.+|.|+|.| .+.++..|||.++.++.+.||+. +++++
T Consensus 148 ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~i 216 (282)
T 3mfq_A 148 LHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDH-----------NIKAI 216 (282)
T ss_dssp HHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHH-----------TCCEE
T ss_pred HHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHc-----------CCCEE
Confidence 33334444444332346677888876 33467789999999999999875 47766
Q ss_pred Ec-CCCCcccHHHH---hcCCCCCEEE
Q 039862 129 YG-GSVNGANCKEL---AAQPDVDGFL 151 (173)
Q Consensus 129 YG-GSV~~~n~~~~---~~~~~vDG~L 151 (173)
+- =.+++.-++.+ ++..++.=+.
T Consensus 217 f~e~~~~~~~~~~l~~~a~~~g~~v~~ 243 (282)
T 3mfq_A 217 FTESTTNPERMKKLQEAVKAKGGQVEV 243 (282)
T ss_dssp ECBTTSCTHHHHHHHHHHHTTSCCCEE
T ss_pred EEeCCCChHHHHHHHHHHHhcCCceEE
Confidence 64 44455445544 4466765443
No 143
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=81.50 E-value=6.5 Score=32.78 Aligned_cols=74 Identities=16% Similarity=0.172 Sum_probs=51.0
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEE
Q 039862 64 VAEQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRII 128 (173)
Q Consensus 64 l~~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il 128 (173)
|..+++..+..+...++.+|.|+|.| .+.++..|||.++.++.+.||+. +++++
T Consensus 182 Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~I 250 (313)
T 1toa_A 182 LDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQR-----------KLPAI 250 (313)
T ss_dssp HHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHT-----------TCSEE
T ss_pred HHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc-----------CCCEE
Confidence 33444444544332356678888855 34568889999999999999864 46655
Q ss_pred -EcCCCCcccHHHHh-----cCCCCC
Q 039862 129 -YGGSVNGANCKELA-----AQPDVD 148 (173)
Q Consensus 129 -YGGSV~~~n~~~~~-----~~~~vD 148 (173)
+=-.++++.++.+. +..++.
T Consensus 251 f~e~~~~~~~~~~la~~~~A~e~gv~ 276 (313)
T 1toa_A 251 FIESSIPHKNVEALRDAVQARGHVVQ 276 (313)
T ss_dssp EEETTSCTHHHHHHHHHHHTTTCCCE
T ss_pred EEeCCCChHHHHHHHccchhhhcCCc
Confidence 56677888888888 777764
No 144
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=81.48 E-value=2.2 Score=35.41 Aligned_cols=60 Identities=15% Similarity=0.271 Sum_probs=46.0
Q ss_pred CeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcce-EEEcCCCCcccHHHHhc
Q 039862 80 NVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTR-IIYGGSVNGANCKELAA 143 (173)
Q Consensus 80 ~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~-ilYGGSV~~~n~~~~~~ 143 (173)
+.+|.|+|.| .+.++..|||.++.++.+.||+. +++ |++=-.++++.++.+++
T Consensus 184 ~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~if~e~~~~~~~~~~ia~ 252 (294)
T 3hh8_A 184 KLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVI-----------KPSALFVESSVDRRPMETVSK 252 (294)
T ss_dssp CCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHS-----------CCSCEEEETTSCSHHHHHHHH
T ss_pred cEEEEECChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHc-----------CCCEEEEeCCCCcHHHHHHHH
Confidence 6688999987 34478889999999999998864 465 45566777787888888
Q ss_pred CCCCCEE
Q 039862 144 QPDVDGF 150 (173)
Q Consensus 144 ~~~vDG~ 150 (173)
..++.=+
T Consensus 253 ~~g~~v~ 259 (294)
T 3hh8_A 253 DSGIPIY 259 (294)
T ss_dssp HHCCCEE
T ss_pred HhCCcEE
Confidence 7776644
No 145
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=81.08 E-value=0.95 Score=38.13 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=28.0
Q ss_pred cceEE--EcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRII--YGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~il--YGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++|++ -.|+| +++++.+++. .++||++||++-++
T Consensus 207 ~iPVivvA~GGI~t~~dv~~~~~-~GAdgVlVGsai~~ 243 (297)
T 4adt_A 207 RLPVVNFAAGGIATPADAAMCMQ-LGMDGVFVGSGIFE 243 (297)
T ss_dssp SCSSEEEEESCCCSHHHHHHHHH-TTCSCEEESHHHHT
T ss_pred CCCeEEEecCCCCCHHHHHHHHH-cCCCEEEEhHHHHc
Confidence 36666 68888 9999888887 58999999998773
No 146
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=80.96 E-value=6.3 Score=33.05 Aligned_cols=73 Identities=21% Similarity=0.215 Sum_probs=50.4
Q ss_pred HHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEE-E
Q 039862 66 EQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRII-Y 129 (173)
Q Consensus 66 ~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il-Y 129 (173)
.+++..+..+...++.+|.|+|.| .+.++..|+|.++.++.+.||+. +++++ +
T Consensus 191 ~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~If~ 259 (321)
T 1xvl_A 191 RQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTN-----------NVPTIFC 259 (321)
T ss_dssp HHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTT-----------TCSEEEE
T ss_pred HHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc-----------CCcEEEE
Confidence 334444443322245677888766 34568889999999999988763 46654 5
Q ss_pred cCCCCcccHHHHhcCCCCCE
Q 039862 130 GGSVNGANCKELAAQPDVDG 149 (173)
Q Consensus 130 GGSV~~~n~~~~~~~~~vDG 149 (173)
=-.+++..++.+++..++.=
T Consensus 260 e~~~~~~~~~~iA~e~g~~v 279 (321)
T 1xvl_A 260 ESTVSDKGQKQVAQATGARF 279 (321)
T ss_dssp ETTSCSHHHHHHHTTTCCEE
T ss_pred eCCCChHHHHHHHHhcCCce
Confidence 67788888899988887653
No 147
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=80.26 E-value=1.6 Score=38.33 Aligned_cols=51 Identities=14% Similarity=0.217 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 105 VHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 105 ~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
..+.||+.+ ..++||+-.|++ +++.+.+++.. +|+|.+|++.+ +|+ +.++.
T Consensus 307 ~a~~Ik~~v--------~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ki~ 360 (419)
T 3l5a_A 307 VNQIVYEHL--------AGRIPLIASGGINSPESALDALQH--ADMVGMSSPFVTEPDFVHKLA 360 (419)
T ss_dssp HHHHHHHHH--------TTSSCEEECSSCCSHHHHHHHGGG--CSEEEESTHHHHCTTHHHHHH
T ss_pred HHHHHHHHc--------CCCCeEEEECCCCCHHHHHHHHHh--CCcHHHHHHHHHCcHHHHHHH
Confidence 445566553 235899998887 67888998887 99999999988 587 44443
No 148
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=80.12 E-value=23 Score=30.90 Aligned_cols=50 Identities=16% Similarity=0.096 Sum_probs=36.4
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.|++.|++.|=+-|+..-.+-.+.-+.+.+=+..|.++||.+||.+-..
T Consensus 46 ~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~ 95 (464)
T 1wky_A 46 EGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDA 95 (464)
T ss_dssp HHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 35889999999888874322222344556677899999999999987643
No 149
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=79.37 E-value=9.7 Score=30.99 Aligned_cols=72 Identities=8% Similarity=0.141 Sum_probs=50.2
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEE
Q 039862 64 VAEQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRII 128 (173)
Q Consensus 64 l~~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il 128 (173)
|..+++..+..+. .+.+|.|+|.| .+.++..|||.++.++.+.||+. +++++
T Consensus 161 Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~i 227 (284)
T 2prs_A 161 TETQVGNELAPLK--GKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQ-----------KATCV 227 (284)
T ss_dssp HHHHHHHHHGGGT--TCCEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHT-----------TCCEE
T ss_pred HHHHHHHHHhcCC--CCeEEEECccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHc-----------CCCEE
Confidence 3344444454433 45678899865 34568889999999999998864 47766
Q ss_pred E-cCCCCcccHHHHhcCCCCC
Q 039862 129 Y-GGSVNGANCKELAAQPDVD 148 (173)
Q Consensus 129 Y-GGSV~~~n~~~~~~~~~vD 148 (173)
+ =-.++++.++.++...++.
T Consensus 228 f~e~~~~~~~~~~ia~~~g~~ 248 (284)
T 2prs_A 228 FAEPQFRPAVVESVARGTSVR 248 (284)
T ss_dssp EECTTSCSHHHHHHTTTSCCE
T ss_pred EEeCCCChHHHHHHHHHcCCe
Confidence 5 5567778888888777765
No 150
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=79.03 E-value=3.1 Score=34.84 Aligned_cols=50 Identities=16% Similarity=0.235 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeeccc
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~as 156 (173)
.+|+++.++.+.++.. ..+++|.-=|+|+++|+.+++. .++|++=+|++-
T Consensus 226 ~~~~~l~~~v~~l~~~---------~~~~~I~ASGGIt~~ni~~~~~-aGaD~i~vGs~i 275 (299)
T 2jbm_A 226 FKPEELHPTATVLKAQ---------FPSVAVEASGGITLDNLPQFCG-PHIDVISMGMLT 275 (299)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTSEEEEESSCCTTTHHHHCC-TTCCEEECTHHH
T ss_pred CCHHHHHHHHHHhhcc---------CCCeeEEEECCCCHHHHHHHHH-CCCCEEEEChhh
Confidence 4688888877766542 2358899999999999999876 789999999843
No 151
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=78.84 E-value=7.2 Score=32.61 Aligned_cols=125 Identities=16% Similarity=0.078 Sum_probs=63.5
Q ss_pred cchhhcCCCEEEEcccccccc--cC-CCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHh----c---CChHHHHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSERRAL--LN-ESNDFVGDKVAYALSRGLKVIACVGETLEQRE----S---GSTVAVVAEQTKAI 71 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~--~~-E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~----~---~~~~~~l~~Ql~~~ 71 (173)
++||++|++.|=+-|+-.+.. -+ +.-+.+.+=+..|.++||.+|+.+-....... . ..+.+...+.++.+
T Consensus 92 ~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (359)
T 4hty_A 92 EVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNSYHTTKGETFDFWRRV 171 (359)
T ss_dssp HHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGGGCCCHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCcchhHHHHHHHHHHHH
Confidence 468999999998888754310 00 00122334489999999999998764321000 0 01233334444444
Q ss_pred HhccCCCCCeEEEEc----ccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC
Q 039862 72 AEKISNWDNVVLAYE----PVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS 132 (173)
Q Consensus 72 l~~v~~~~~iiIAYE----PvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS 132 (173)
..... ..+-+|+|| |...-.....++.+.....++.+-+.+++. ..+-+|++||.
T Consensus 172 a~ryk-~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~-----dp~~~I~v~g~ 230 (359)
T 4hty_A 172 SERYN-GINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAH-----NPKAIALVAGF 230 (359)
T ss_dssp HHHTT-TCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHH-----CTTCEEEEECH
T ss_pred HHHhC-CCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHh-----CCCcEEEEcCc
Confidence 44332 234455664 542211111234455544444444444443 23456888874
No 152
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=78.19 E-value=25 Score=28.30 Aligned_cols=45 Identities=16% Similarity=0.114 Sum_probs=32.3
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCCh------HHHHHHHHHh
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP------EFIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~------~f~~Ii~~~~ 169 (173)
++|++==|+|+++|+.++++. +.+++.+|+.-.++ +|..|-+.+.
T Consensus 174 ~ip~~ptGGI~~~n~~~~l~a-Ga~~~vgGs~l~~~~~i~~~~~~~i~~~a~ 224 (232)
T 4e38_A 174 DIRLMPTGGITPSNIDNYLAI-PQVLACGGTWMVDKKLVTNGEWDEIARLTR 224 (232)
T ss_dssp TCEEEEBSSCCTTTHHHHHTS-TTBCCEEECGGGCHHHHHTTCHHHHHHHHH
T ss_pred CCCeeeEcCCCHHHHHHHHHC-CCeEEEECchhcChHHhhcCCHHHHHHHHH
Confidence 699999999999999999974 45666666654432 2666655543
No 153
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=78.16 E-value=16 Score=32.48 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=25.1
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeeccc
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~as 156 (173)
++||+..|+| ++..+.+.+. .+.||+.+|++-
T Consensus 359 ~iPVIa~GGI~~~~di~kala-~GA~~V~vGs~~ 391 (511)
T 3usb_A 359 GIPVIADGGIKYSGDMVKALA-AGAHVVMLGSMF 391 (511)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESTTT
T ss_pred CCcEEEeCCCCCHHHHHHHHH-hCchhheecHHH
Confidence 4999997777 5666666665 589999999974
No 154
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=77.86 E-value=9.9 Score=31.15 Aligned_cols=75 Identities=13% Similarity=0.252 Sum_probs=49.3
Q ss_pred HHHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEE
Q 039862 65 AEQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIY 129 (173)
Q Consensus 65 ~~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilY 129 (173)
..+++..+..+ ..+.+|.|+|.| .+.++..|||.++.++.+.||+. ++++++
T Consensus 167 d~~~~~~l~~~--~~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~if 233 (286)
T 3gi1_A 167 TEEYTQKFKKV--RSKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEY-----------NVKTIF 233 (286)
T ss_dssp HHHHHHHHTTC--SCCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHT-----------TCCEEE
T ss_pred HHHHHHHHhcC--CCCEEEEECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHc-----------CCCEEE
Confidence 33344444433 356778899955 34567889999999999999864 466554
Q ss_pred -cCCCCcccHHHHhcCCCCCEEEe
Q 039862 130 -GGSVNGANCKELAAQPDVDGFLV 152 (173)
Q Consensus 130 -GGSV~~~n~~~~~~~~~vDG~Li 152 (173)
==.+++..++.++...++.=+.+
T Consensus 234 ~e~~~~~~~~~~la~~~g~~v~~l 257 (286)
T 3gi1_A 234 AEDNVNPKIAHAIAKSTGAKVKTL 257 (286)
T ss_dssp ECTTSCTHHHHHHHHTTTCEEEEC
T ss_pred EeCCCChHHHHHHHHHhCCeEEEe
Confidence 55667777888888888765444
No 155
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=75.83 E-value=17 Score=29.42 Aligned_cols=47 Identities=9% Similarity=-0.034 Sum_probs=30.8
Q ss_pred cchhhcCCCEEEEc-cccccc--------ccCC---C-HHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVILG-HSERRA--------LLNE---S-NDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~viiG-HSERR~--------~~~E---~-~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+.+|++|++.|=+. |.+-+. ...+ . =+.+.+=+..|.++||.+|+++
T Consensus 52 ~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 52 SDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 35799999999775 765221 0101 1 1123344799999999999987
No 156
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=75.55 E-value=31 Score=27.97 Aligned_cols=75 Identities=11% Similarity=0.167 Sum_probs=52.4
Q ss_pred HHHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceE-E
Q 039862 65 AEQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRI-I 128 (173)
Q Consensus 65 ~~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~i-l 128 (173)
..+++..+..+ .++.+|.|+|.| .+.++..|||.++.++.+.||+. ++++ +
T Consensus 165 d~~~~~~l~~~--~~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~if 231 (284)
T 3cx3_A 165 TKKFQPKFEKA--TQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTY-----------KVKTIF 231 (284)
T ss_dssp HHHHHHHHHSC--SCCCEEEEESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHT-----------TCCCEE
T ss_pred HHHHHHHHhcC--CCCEEEEECCchHHHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHc-----------CCCEEE
Confidence 33344444433 245577888875 34568889999999999998864 4664 4
Q ss_pred EcCCCCcccHHHHhcCCCCCEEEe
Q 039862 129 YGGSVNGANCKELAAQPDVDGFLV 152 (173)
Q Consensus 129 YGGSV~~~n~~~~~~~~~vDG~Li 152 (173)
+==.+++..++.+++..++.=+.+
T Consensus 232 ~e~~~~~~~~~~ia~~~g~~v~~l 255 (284)
T 3cx3_A 232 TESNASSKVAETLVKSTGVGLKTL 255 (284)
T ss_dssp ECSSSCCHHHHHHHSSSSCCEEEC
T ss_pred EeCCCCcHHHHHHHHHcCCeEEEe
Confidence 566778888899998888765544
No 157
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=75.43 E-value=2.9 Score=35.13 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
.+|++++++++.++ .++++.-=|+|+++|+.+++. .+||++=+|..
T Consensus 227 ~~~~~l~~av~~~~------------~~v~ieaSGGIt~~~i~~~a~-tGVD~IsvGal 272 (287)
T 3tqv_A 227 FSGEDIDIAVSIAR------------GKVALEVSGNIDRNSIVAIAK-TGVDFISVGAI 272 (287)
T ss_dssp CCHHHHHHHHHHHT------------TTCEEEEESSCCTTTHHHHHT-TTCSEEECSHH
T ss_pred CCHHHHHHHHHhhc------------CCceEEEECCCCHHHHHHHHH-cCCCEEEEChh
Confidence 67888888877654 258899999999999999887 89999999864
No 158
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=74.89 E-value=3.2 Score=35.16 Aligned_cols=48 Identities=17% Similarity=0.199 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
.+|++++++++.++ .++.+---|+|+++|+.+++. .+||.+=+|..-.
T Consensus 236 ~s~~~l~~av~~~~------------~~v~leaSGGIt~~~i~~~A~-tGVD~IsvGalth 283 (300)
T 3l0g_A 236 MSISEIKKAVDIVN------------GKSVLEVSGCVNIRNVRNIAL-TGVDYISIGCITN 283 (300)
T ss_dssp CCHHHHHHHHHHHT------------TSSEEEEESSCCTTTHHHHHT-TTCSEEECGGGTS
T ss_pred CCHHHHHHHHHhhc------------CceEEEEECCCCHHHHHHHHH-cCCCEEEeCcccc
Confidence 68999998887764 247888999999999999987 8999999997543
No 159
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=74.49 E-value=1.7 Score=36.01 Aligned_cols=117 Identities=13% Similarity=0.107 Sum_probs=66.8
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEE--eCCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIAC--VGETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlC--vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
.+++++|++++.+|=.-. -++-|....+++-.+. .|+...+- ++... +..+. .+||... + ..
T Consensus 80 ~~~~~~GadGvV~G~Lt~---dg~iD~~~~~~Li~~a-~~~~vTFHRAfD~~~------d~~~a-le~L~~l--G---~~ 143 (256)
T 1twd_A 80 RTVRELGFPGLVTGVLDV---DGNVDMPRMEKIMAAA-GPLAVTFHRAFDMCA------NPLYT-LNNLAEL--G---IA 143 (256)
T ss_dssp HHHHHTTCSEEEECCBCT---TSSBCHHHHHHHHHHH-TTSEEEECGGGGGCS------CHHHH-HHHHHHH--T---CC
T ss_pred HHHHHcCCCEEEEeeECC---CCCcCHHHHHHHHHHh-CCCcEEEECchhccC------CHHHH-HHHHHHc--C---CC
Confidence 468899999999997644 2455655556665443 57766651 11110 11111 2333322 2 22
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEee
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVG 153 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG 153 (173)
++.= +|..++ +.+-...|++.+.. . + .+.|+-||+|+++|+.++. ..+++-+=.+
T Consensus 144 rILT---------SG~~~~---a~~g~~~L~~Lv~~-a----~-~i~Im~GgGv~~~Ni~~l~-~tGv~e~H~S 198 (256)
T 1twd_A 144 RVLT---------SGQKSD---ALQGLSKIMELIAH-R----D-APIIMAGAGVRAENLHHFL-DAGVLEVHSS 198 (256)
T ss_dssp EEEE---------CTTSSS---TTTTHHHHHHHHTS-S----S-CCEEEEESSCCTTTHHHHH-HHTCSEEEEC
T ss_pred EEEC---------CCCCCC---HHHHHHHHHHHHHh-h----C-CcEEEecCCcCHHHHHHHH-HcCCCeEeEC
Confidence 3221 233333 23344556665432 1 2 7899999999999999998 6777666543
No 160
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=73.73 E-value=33 Score=27.52 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=31.9
Q ss_pred cchhhcCCCEEEE-ccccccc-----------------ccC--C-CHHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVIL-GHSERRA-----------------LLN--E-SNDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~vii-GHSERR~-----------------~~~--E-~~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+.||++|++.|=+ .|++... .++ | .-+.+.+=+..|.+.||.+|+++
T Consensus 43 ~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 43 SHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp HHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 4689999999977 5665310 011 2 12334455899999999999998
No 161
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=73.20 E-value=22 Score=34.16 Aligned_cols=43 Identities=12% Similarity=0.080 Sum_probs=32.5
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC--hH-HHHHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK--PE-FIDIIKS 167 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~--~~-f~~Ii~~ 167 (173)
++||+.-|+| +.+.+.+++. .+.|++.||++.+. +. +..+.+.
T Consensus 787 ~ipvi~~GGI~s~~da~~~l~-~Ga~~v~vg~~~l~~~~~~~~~~~~~ 833 (1025)
T 1gte_A 787 GFPILATGGIDSAESGLQFLH-SGASVLQVCSAVQNQDFTVIQDYCTG 833 (1025)
T ss_dssp TCCEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHTSCTTHHHHHHHH
T ss_pred CCCEEEecCcCCHHHHHHHHH-cCCCEEEEeeccccCCccHHHHHHHH
Confidence 5999998888 5566788887 79999999998884 33 4444443
No 162
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=72.52 E-value=11 Score=32.34 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=27.7
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+--|+|. ++++.+.+. .+.|++.+|++-+
T Consensus 256 ~ipVia~GGI~~~~d~~~ala-~GAd~V~iG~~~l 289 (404)
T 1eep_A 256 NICIIADGGIRFSGDVVKAIA-AGADSVMIGNLFA 289 (404)
T ss_dssp SCEEEEESCCCSHHHHHHHHH-HTCSEEEECHHHH
T ss_pred CceEEEECCCCCHHHHHHHHH-cCCCHHhhCHHHh
Confidence 69999978876 788888887 6899999999764
No 163
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=72.18 E-value=18 Score=30.80 Aligned_cols=86 Identities=13% Similarity=0.052 Sum_probs=51.5
Q ss_pred cchhhcCCCEEEE---ccccccc----------ccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChH---HHHH
Q 039862 2 EMLVNLSIPWVIL---GHSERRA----------LLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTV---AVVA 65 (173)
Q Consensus 2 ~mLkd~G~~~vii---GHSERR~----------~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~---~~l~ 65 (173)
.++|++|++||++ +|-..-. ...-..+.|..=+.+|-++||...+.+.-+...-..++.. +.-.
T Consensus 61 ~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~W~~~d~~~e~e~~~ 140 (340)
T 4h41_A 61 QHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGRYWDTGDLSWEIEDNK 140 (340)
T ss_dssp HHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSHHHHHSCGGGGHHHHH
T ss_pred HHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChhhcCCCCHHHHHHHHH
Confidence 3689999999998 5532221 1112335677778999999999888887665444444332 2233
Q ss_pred HHHHHHHhccC----CCCCeEEEEcc
Q 039862 66 EQTKAIAEKIS----NWDNVVLAYEP 87 (173)
Q Consensus 66 ~Ql~~~l~~v~----~~~~iiIAYEP 87 (173)
..++.+..... .+.--+|-||+
T Consensus 141 ~~i~El~~~Yg~~h~af~GWYi~~Ei 166 (340)
T 4h41_A 141 YVIDEVWKMYGEKYKSFGGWYISGEI 166 (340)
T ss_dssp HHHHHHHHHTTTTCTTEEEEEECCCC
T ss_pred HHHHHHHHHhhccCCCeeEEEecccc
Confidence 33444444332 13335678887
No 164
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=71.60 E-value=38 Score=29.03 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=26.0
Q ss_pred eEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 126 RIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 126 ~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
||+--|+| ++.++...+. .+.|++.+|++-+-
T Consensus 201 PVIAdGGI~~~~di~kALa-~GAd~V~iGr~f~~ 233 (361)
T 3r2g_A 201 SIVADGGIKTSGDIVKALA-FGADFVMIGGMLAG 233 (361)
T ss_dssp EEEEESCCCSHHHHHHHHH-TTCSEEEESGGGTT
T ss_pred CEEEECCCCCHHHHHHHHH-cCCCEEEEChHHhC
Confidence 88887777 5888888887 68999999997553
No 165
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=70.32 E-value=5.3 Score=31.59 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=30.3
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+-||.|..+...+-+-..|.|++-.|...|
T Consensus 150 ~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 150 HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGG
T ss_pred CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHH
Confidence 4899999999999988888889999999998765
No 166
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=70.20 E-value=3.7 Score=34.10 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=33.4
Q ss_pred CcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC--ChH-HHHHHH
Q 039862 123 ASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL--KPE-FIDIIK 166 (173)
Q Consensus 123 ~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl--~~~-f~~Ii~ 166 (173)
.++||+--|+|. ++.+.+.+. .+.|+|.+|++.+ +|. |.+|.+
T Consensus 288 ~~ipVi~~GGI~~~~da~~~l~-~GAd~V~igr~~l~~~P~~~~~i~~ 334 (336)
T 1f76_A 288 GRLPIIGVGGIDSVIAAREKIA-AGASLVQIYSGFIFKGPPLIKEIVT 334 (336)
T ss_dssp TSSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHH-CCCCEEEeeHHHHhcCcHHHHHHHh
Confidence 369999988876 566777776 6899999999977 477 666654
No 167
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=69.65 E-value=3.6 Score=31.81 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=33.0
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHHh
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~~ 169 (173)
++|++.+|.++. +.+.+++. .++|++.+|...+. ++ +.++++.+.
T Consensus 77 ~ipvi~~g~i~~~~~~~~~~~-~Gad~V~i~~~~~~~~~~~~~~~~~~g 124 (253)
T 1h5y_A 77 SIPVLVGGGVRSLEDATTLFR-AGADKVSVNTAAVRNPQLVALLAREFG 124 (253)
T ss_dssp SSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHCTHHHHHHHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCEEEEChHHhhCcHHHHHHHHHcC
Confidence 489999888875 44544444 78999999998874 66 777776643
No 168
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=69.43 E-value=49 Score=29.95 Aligned_cols=118 Identities=11% Similarity=0.101 Sum_probs=70.6
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCH--HHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETL--EQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~--~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
++||++|++.|=+=|-+-+..+ ++. ++.+-++||.+|+.+.... -.+....+.+...+++...+.......
T Consensus 94 ~LmK~~GiN~VRvy~~~P~~~~---d~~----ldl~~~~GIyVIle~~~p~~~i~~~~P~~~~~~~~r~~~~V~ry~nhP 166 (555)
T 2w61_A 94 PFLKMLGVNTLRVYAIDPTKSH---DIC----MEALSAEGMYVLLDLSEPDISINRENPSWDVHIFERYKSVIDAMSSFP 166 (555)
T ss_dssp HHHHHHTCSEEEECCCCTTSCC---HHH----HHHHHHTTCEEEEESCBTTBSCCTTSCCCCHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHcCCCEEEEeccCCCCCh---HHH----HHHHHhcCCEEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 4689999999977555543211 332 7889999999999975321 122333455555566666555433344
Q ss_pred CeE---EEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC
Q 039862 80 NVV---LAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS 132 (173)
Q Consensus 80 ~ii---IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS 132 (173)
.++ +.-|+.. +........+...+++.+|+++++.. ...|||=|=+.
T Consensus 167 ~Vi~W~vGNE~~~--~~~~~~~~~y~~aa~r~~~~~lk~~d----~R~IpVgy~~a 216 (555)
T 2w61_A 167 NLLGYFAGNQVTN--DHTNTFASPFVKAAIRDAKEYISHSN----HRKIPVGYSTN 216 (555)
T ss_dssp TEEEEEEEESSSC--STTCGGGHHHHHHHHHHHHHHHHHSS----SCCCCEEEEEC
T ss_pred cEEEEEeCccccC--CCccchhhHHHHHHHHHHHHHHHhcC----CCcceeecccc
Confidence 443 2235432 11112234677888999999998752 23478888553
No 169
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=69.32 E-value=11 Score=30.81 Aligned_cols=59 Identities=10% Similarity=0.246 Sum_probs=44.0
Q ss_pred CCeEEEEccccc-------------ccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEE-EcCCCCcccHHHHhcC
Q 039862 79 DNVVLAYEPVWA-------------IGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRII-YGGSVNGANCKELAAQ 144 (173)
Q Consensus 79 ~~iiIAYEPvwA-------------IGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il-YGGSV~~~n~~~~~~~ 144 (173)
++.+|.|+|.|. .|.|..|||.++.++.+.||+. +++++ |=-.+++..++.+++.
T Consensus 190 ~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~If~e~~~~~~~~~~ia~~ 258 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDYNLVQIPIEVEGQEPSAQELKQLIDTAKEN-----------NLTMVFGETQFSTKSSEAIAAE 258 (291)
T ss_dssp CCEEEESSCCCHHHHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTT-----------TCCEEEEETTSCCHHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHc-----------CCCEEEEeCCCChHHHHHHHHH
Confidence 456788888763 3557779999999999998753 46655 5677788888888776
Q ss_pred CCCC
Q 039862 145 PDVD 148 (173)
Q Consensus 145 ~~vD 148 (173)
.++-
T Consensus 259 ~g~~ 262 (291)
T 1pq4_A 259 IGAG 262 (291)
T ss_dssp HTCE
T ss_pred cCCe
Confidence 6654
No 170
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=68.84 E-value=13 Score=28.86 Aligned_cols=78 Identities=17% Similarity=0.112 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHH
Q 039862 29 FVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHA 107 (173)
Q Consensus 29 ~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~ 107 (173)
.+.+-++.|.+.|...|++ .|............+.+.+.+..+++. ...+.+++||.+--++-...+++++.++++
T Consensus 90 ~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~---~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 166 (285)
T 1qtw_A 90 AFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDK---TQGVTAVIENTAGQGSNLGFKFEHLAAIID 166 (285)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHH---CSSCEEEEECCCCCTTBCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhc---cCCCEEEEecCCCCCCcccCCHHHHHHHHH
Confidence 3455577888899887765 353211100011223344444444432 346899999997333333457888877776
Q ss_pred HH
Q 039862 108 EL 109 (173)
Q Consensus 108 ~I 109 (173)
.+
T Consensus 167 ~v 168 (285)
T 1qtw_A 167 GV 168 (285)
T ss_dssp HC
T ss_pred hh
Confidence 65
No 171
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=68.44 E-value=11 Score=31.03 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=32.1
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH-HHHHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~-f~~Ii~~~ 168 (173)
++|||+++.+-...-.+.+...|.||+++|-+.|+++ +.++++.+
T Consensus 113 ~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a 158 (272)
T 3qja_A 113 SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRT 158 (272)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHH
T ss_pred CCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHH
Confidence 5899998766555424455568999999999999853 55555443
No 172
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=68.31 E-value=17 Score=32.23 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=25.8
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+-.|+|. ++.+.+.+. .+.|++.+|++-+
T Consensus 334 ~iPVIa~GGI~~~~di~kala-~GAd~V~iGs~f~ 367 (496)
T 4fxs_A 334 GIPVIADGGIRFSGDISKAIA-AGASCVMVGSMFA 367 (496)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESTTTT
T ss_pred CCeEEEeCCCCCHHHHHHHHH-cCCCeEEecHHHh
Confidence 49999988885 666766666 5899999999644
No 173
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=68.15 E-value=26 Score=27.86 Aligned_cols=104 Identities=13% Similarity=0.053 Sum_probs=54.6
Q ss_pred chhhcCCCEEEEcccc--cccccCCC--------HHHHHHHHHHHHHCCCeEEEEe-----CCCHHHH-hcCChHHHHHH
Q 039862 3 MLVNLSIPWVILGHSE--RRALLNES--------NDFVGDKVAYALSRGLKVIACV-----GETLEQR-ESGSTVAVVAE 66 (173)
Q Consensus 3 mLkd~G~~~viiGHSE--RR~~~~E~--------~~~i~~Kv~~al~~gl~pIlCv-----GE~~~~r-~~~~~~~~l~~ 66 (173)
.|++.|++.+. |.- +...+.-. -+.+.+-++.|.+.|...|+|. |...... ......+.+.+
T Consensus 74 ~l~~~gl~i~~--~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~ 151 (309)
T 2hk0_A 74 SAKDNGIILTA--GIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVE 151 (309)
T ss_dssp HHHHTTCEEEE--ECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHH
T ss_pred HHHHcCCeEEE--ecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHH
Confidence 57788887665 432 11222211 2456677888999999999875 3310000 00011223333
Q ss_pred HHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 67 QTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 67 Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
.++.+..... ...+.+++||.+--.+....+++++.++++.+
T Consensus 152 ~l~~l~~~a~-~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 193 (309)
T 2hk0_A 152 GINGIADFAN-DLGINLCIEVLNRFENHVLNTAAEGVAFVKDV 193 (309)
T ss_dssp HHHHHHHHHH-HTTCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCEEEEeecccccccccCCHHHHHHHHHHc
Confidence 3333332111 23588999998533334446777776665554
No 174
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=67.65 E-value=3.1 Score=37.84 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=35.6
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
++||+-.|++ +++++.+++..-.+|++.+|++.+ +|+ +.++.
T Consensus 280 ~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~ 324 (671)
T 1ps9_A 280 SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQ 324 (671)
T ss_dssp SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHH
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHH
Confidence 5899999998 789999999988899999999988 577 44443
No 175
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=67.58 E-value=3.6 Score=33.15 Aligned_cols=48 Identities=25% Similarity=0.309 Sum_probs=28.7
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeec
Q 039862 91 IGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 91 IGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~ 154 (173)
-|||++.+-+.+... ..+.|++--|+++|+|+.+.++..+-.||=|-+
T Consensus 156 GGtG~~fDW~~~~~~----------------~~~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsS 203 (228)
T 4aaj_A 156 AGSGKLHDLRVSSLV----------------ARKIPVIVAGGLNAENVEEVIKVVKPYGVDVSS 203 (228)
T ss_dssp ------CCCHHHHHH----------------HHHSCEEEESSCCTTTHHHHHHHHCCSEEEESG
T ss_pred CCCcCcCChHHHHHh----------------hhcCCeEEECCCCHHHHHHHHHHhCCCEEEeCC
Confidence 478888776543321 113688999999999999988765656665633
No 176
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=67.55 E-value=30 Score=28.79 Aligned_cols=150 Identities=13% Similarity=0.152 Sum_probs=79.7
Q ss_pred cchhhcCCCEEEEccc--cc--cccc-CCCHHHHHHHHHHHHHCCCeE----EEEeCCCHHHHhcCChHHHHHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHS--ER--RALL-NESNDFVGDKVAYALSRGLKV----IACVGETLEQRESGSTVAVVAEQTKAIA 72 (173)
Q Consensus 2 ~mLkd~G~~~viiGHS--ER--R~~~-~E~~~~i~~Kv~~al~~gl~p----IlCvGE~~~~r~~~~~~~~l~~Ql~~~l 72 (173)
+.|+++|++.+-+|.- +. +.+. .-+-+.+-+-++.+.+.|+.. |+=.||+.++. .+-+.. +
T Consensus 163 ~~L~~aGvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~---------~~~l~~-l 232 (369)
T 1r30_A 163 QRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDR---------AGLLLQ-L 232 (369)
T ss_dssp HHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHH---------HHHHHH-H
T ss_pred HHHHHCCCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHH---------HHHHHH-H
Confidence 4689999999887631 11 0111 235567778888898888842 22225655442 222222 2
Q ss_pred hccCC-CCCe-EEEEccc--ccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCc-ccHHHHhcCCCC
Q 039862 73 EKISN-WDNV-VLAYEPV--WAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNG-ANCKELAAQPDV 147 (173)
Q Consensus 73 ~~v~~-~~~i-iIAYEPv--wAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~-~n~~~~~~~~~v 147 (173)
..+.. ...+ +-.+-|. .....-.++++++..++++..|..+... .+++- +|-.+. .+...+.-..+.
T Consensus 233 ~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~-------~i~i~-~~~~~l~~~~~~~~l~~Ga 304 (369)
T 1r30_A 233 ANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTS-------YVRLS-AGREQMNEQTQAMCFMAGA 304 (369)
T ss_dssp HSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTS-------EEEEE-SSGGGSCHHHHHHHHHHTC
T ss_pred HhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCC-------ceEee-cchhhcChHHHHHHhhCCC
Confidence 22221 1111 1222232 2222223578899999999998876431 24433 332221 223455556789
Q ss_pred CEEEeecccCC-----hH-HHHHHHHHh
Q 039862 148 DGFLVGGASLK-----PE-FIDIIKSAT 169 (173)
Q Consensus 148 DG~LiG~asl~-----~~-f~~Ii~~~~ 169 (173)
+|++.|...+. ++ +.++++...
T Consensus 305 n~~~~g~~~~t~~~~~~~~~~~~i~~~g 332 (369)
T 1r30_A 305 NSIFYGCKLLTTPNPEEDKDLQLFRKLG 332 (369)
T ss_dssp CEEECSSBSSSSBCCCHHHHHHHHHHTT
T ss_pred ceEEeCCeeeCCCCCCHHHHHHHHHHcC
Confidence 99988864432 23 777776643
No 177
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=67.44 E-value=3.8 Score=35.20 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhccchhhcCcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC--ChH-HHHHHHHHh
Q 039862 103 QEVHAELRKWLKDNVSAEVAASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL--KPE-FIDIIKSAT 169 (173)
Q Consensus 103 ~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl--~~~-f~~Ii~~~~ 169 (173)
-+++..|++.+ ..++||+.-|+|. ++.+.+.+. .+.|+|.||++.+ .|. |.+|.+.+.
T Consensus 285 ~~~v~~i~~~v--------~~~ipvI~~GGI~s~~da~~~l~-~GAd~V~vgra~l~~gP~~~~~i~~~l~ 346 (367)
T 3zwt_A 285 TQTIREMYALT--------QGRVPIIGVGGVSSGQDALEKIR-AGASLVQLYTALTFWGPPVVGKVKRELE 346 (367)
T ss_dssp HHHHHHHHHHT--------TTCSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHc--------CCCceEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHhcCcHHHHHHHHHHH
Confidence 34555555542 2369999977775 555777776 7899999999986 376 777776553
No 178
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=67.42 E-value=9.9 Score=32.04 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.+|++++++++.+ ..++++.-=|+|+++|+.+++. .++|++=||....+
T Consensus 238 ~~~~~l~~av~~i------------~~~v~ieaSGGI~~~~i~~~a~-tGVD~isvG~lt~s 286 (298)
T 3gnn_A 238 FTLDMMRDAVRVT------------EGRAVLEVSGGVNFDTVRAIAE-TGVDRISIGALTKD 286 (298)
T ss_dssp CCHHHHHHHHHHH------------TTSEEEEEESSCSTTTHHHHHH-TTCSEEECGGGGTS
T ss_pred CCHHHHHHHHHHh------------CCCCeEEEEcCCCHHHHHHHHH-cCCCEEEECCeecC
Confidence 5788888777654 1358899999999999999996 89999999986554
No 179
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=66.65 E-value=2.9 Score=35.42 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=29.9
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+-.|+| +++|+.+++. .+.||+.+|++-+.
T Consensus 208 ~iPViaaGGI~~~~~~~~~l~-~GAd~V~vGs~~~~ 242 (369)
T 3bw2_A 208 DIPVVAAGGIMRGGQIAAVLA-AGADAAQLGTAFLA 242 (369)
T ss_dssp SSCEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHT
T ss_pred CceEEEECCCCCHHHHHHHHH-cCCCEEEEChHHhC
Confidence 5899999999 9999999988 57999999997663
No 180
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=66.15 E-value=7.2 Score=29.31 Aligned_cols=52 Identities=21% Similarity=0.316 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
...+.+.++++.+|+. + ..+++|+.||.+.++.. +.+...++|+++..++++
T Consensus 81 ~~~~~~~~~i~~L~~~-----g---~~~i~v~vGG~~~~~~~-~~l~~~G~d~v~~~~~~~ 132 (161)
T 2yxb_A 81 AHLHLMKRLMAKLREL-----G---ADDIPVVLGGTIPIPDL-EPLRSLGIREIFLPGTSL 132 (161)
T ss_dssp CHHHHHHHHHHHHHHT-----T---CTTSCEEEEECCCHHHH-HHHHHTTCCEEECTTCCH
T ss_pred hhHHHHHHHHHHHHhc-----C---CCCCEEEEeCCCchhcH-HHHHHCCCcEEECCCCCH
Confidence 4567777777777663 1 13599999998876554 346679999988767754
No 181
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=65.09 E-value=37 Score=26.40 Aligned_cols=103 Identities=13% Similarity=0.030 Sum_probs=53.4
Q ss_pred cchhhcCCCEEEEcccccccccC----CCHHHHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHHHHHHhccC
Q 039862 2 EMLVNLSIPWVILGHSERRALLN----ESNDFVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQTKAIAEKIS 76 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~----E~~~~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~ 76 (173)
++|++.|++.+.++ +-...... +.-+.+.+-++.|.+.|...|.+ .|............+.+.+.|+.+....
T Consensus 55 ~~l~~~gl~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a- 132 (286)
T 3dx5_A 55 NCLKDKTLEITMIS-DYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELF- 132 (286)
T ss_dssp HHTGGGTCCEEEEE-CCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHcCCeEEEEe-cCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHH-
Confidence 45778888876652 11111111 12345667788899999988855 4543221111112233333343333211
Q ss_pred CCCCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 77 NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 77 ~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
....+.+++||.+ +....+++++.++++.+
T Consensus 133 ~~~Gv~l~lE~~~---~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 133 AQHNMYVLLETHP---NTLTDTLPSTLELLGEV 162 (286)
T ss_dssp HHTTCEEEEECCT---TSTTSSHHHHHHHHHHH
T ss_pred HHhCCEEEEecCC---CcCcCCHHHHHHHHHhc
Confidence 1235889999975 22335677766555544
No 182
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=65.01 E-value=7 Score=33.42 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=27.8
Q ss_pred cCcceEEE-cCCCCcccHHHHh---cCCCC--CEEEeecccCCh
Q 039862 122 AASTRIIY-GGSVNGANCKELA---AQPDV--DGFLVGGASLKP 159 (173)
Q Consensus 122 ~~~i~ilY-GGSV~~~n~~~~~---~~~~v--DG~LiG~asl~~ 159 (173)
+..+|++| +|+++.+...+.+ ...+. .||++||+-+..
T Consensus 243 a~~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 243 STDLPYIYLSAGVSAELFQETLVFAHKAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp TCSSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEEEECHHHHTT
T ss_pred cCCCCEEEECCCCCHHHHHHHHHHHHHcCCCcceEEeeHHHHHh
Confidence 34699876 8888876654443 34566 999999998874
No 183
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=64.90 E-value=5.5 Score=33.96 Aligned_cols=46 Identities=22% Similarity=0.147 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
.+|++++++++.++ .++++.-=|+|+++|+.+++. .+||++=+|..
T Consensus 260 ~~~~~l~~av~~l~------------~~v~ieaSGGIt~~~I~~~a~-tGVD~isvGal 305 (320)
T 3paj_A 260 FSLEMMREAVKINA------------GRAALENSGNITLDNLKECAE-TGVDYISVGAL 305 (320)
T ss_dssp CCHHHHHHHHHHHT------------TSSEEEEESSCCHHHHHHHHT-TTCSEEECTHH
T ss_pred CCHHHHHHHHHHhC------------CCCeEEEECCCCHHHHHHHHH-cCCCEEEECce
Confidence 57888888776643 358899999999999999997 89999999974
No 184
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=64.86 E-value=60 Score=26.96 Aligned_cols=46 Identities=17% Similarity=0.012 Sum_probs=33.0
Q ss_pred cchhhcCCCEEEEc-ccccccccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVILG-HSERRALLNESNDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~viiG-HSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+.||+.|+++|=+. |-|... -..+.+.+.+-++.|.++||++++-+
T Consensus 34 ~ilk~~G~N~VRi~~w~~P~~-g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 34 NILAANGVNTVRQRVWVNPAD-GNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp HHHHHTTCCEEEEEECSSCTT-CTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHCCCCEEEEeeeeCCCC-CcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35799999999885 333221 12244556678899999999999975
No 185
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=63.86 E-value=28 Score=27.23 Aligned_cols=106 Identities=13% Similarity=0.068 Sum_probs=53.0
Q ss_pred cchhhcCCCEEEEcccccccccCCC--------HHHHHHHHHHHHHCCCeEEEEe-CCCHHH-H--hcCChHHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSERRALLNES--------NDFVGDKVAYALSRGLKVIACV-GETLEQ-R--ESGSTVAVVAEQTK 69 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~--------~~~i~~Kv~~al~~gl~pIlCv-GE~~~~-r--~~~~~~~~l~~Ql~ 69 (173)
++|++.|++.+-+....+ ..+.-. -+.+.+-++.|.+.|...|++. |-.... + ......+.+.+.|+
T Consensus 71 ~~l~~~gl~v~~~~~~~~-~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~ 149 (287)
T 3kws_A 71 QALNGRNIKVSAICAGFK-GFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFN 149 (287)
T ss_dssp HHHTTSSCEECEEECCCC-SCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEEecCCC-CcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHH
Confidence 357778888765533322 222211 2456667888999999988763 311000 0 00112233333343
Q ss_pred HHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 70 AIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 70 ~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
.+..... ...+.++|||.---.+....+++++.++++.+
T Consensus 150 ~l~~~a~-~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v 188 (287)
T 3kws_A 150 EMGTFAA-QHGTSVIFEPLNRKECFYLRQVADAASLCRDI 188 (287)
T ss_dssp HHHHHHH-HTTCCEEECCCCTTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHH-HcCCEEEEEecCcccCcccCCHHHHHHHHHHc
Confidence 3332111 23578999965211233445677766555543
No 186
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=63.75 E-value=4.5 Score=32.86 Aligned_cols=44 Identities=14% Similarity=-0.105 Sum_probs=34.2
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChHHHHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 167 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~f~~Ii~~ 167 (173)
++||+.++.+....-...+...|.||+++|.+.++..+.+++..
T Consensus 106 ~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~~~l~~l~~~ 149 (254)
T 1vc4_A 106 DLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGELTGAYLEE 149 (254)
T ss_dssp CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHHHHHHH
T ss_pred CCCEEECCcCCCHHHHHHHHHcCCCEEEECccchHHHHHHHHHH
Confidence 59999999988885455577799999999999888326666553
No 187
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=63.63 E-value=14 Score=30.69 Aligned_cols=72 Identities=10% Similarity=0.180 Sum_probs=48.5
Q ss_pred HHHHHHHHhccCCCCCeEEEEcccc---------------cccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEE
Q 039862 65 AEQTKAIAEKISNWDNVVLAYEPVW---------------AIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIY 129 (173)
Q Consensus 65 ~~Ql~~~l~~v~~~~~iiIAYEPvw---------------AIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilY 129 (173)
..+++..+..+ .++.+|.|+|.| .+.++..|||.++.++.+.||+ .++++++
T Consensus 178 d~~~~~~l~~~--~~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~-----------~~v~~If 244 (312)
T 2o1e_A 178 DKLYRTTAKKA--EKKEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKE-----------HNVKVIY 244 (312)
T ss_dssp HHHHHHHHHSC--SCCEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTS-----------SCCCEEE
T ss_pred HHHHHHHhhcc--CCCEEEEECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHH-----------cCCCEEE
Confidence 33444444433 245577777765 3556788999999999888875 3577665
Q ss_pred -cCCCCcccHHHHhcCCCCCE
Q 039862 130 -GGSVNGANCKELAAQPDVDG 149 (173)
Q Consensus 130 -GGSV~~~n~~~~~~~~~vDG 149 (173)
==.+++..++.+++..++-=
T Consensus 245 ~e~~~~~~~~~~ia~e~g~~v 265 (312)
T 2o1e_A 245 FEEIASSKVADTLASEIGAKT 265 (312)
T ss_dssp CSSCCCHHHHHHHHHHTCCEE
T ss_pred EeCCCChHHHHHHHHHhCCcE
Confidence 56667777888887777653
No 188
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=63.37 E-value=53 Score=25.90 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=31.3
Q ss_pred chh-hcCCCEEEEccccc--ccccCC---CHHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 3 MLV-NLSIPWVILGHSER--RALLNE---SNDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 3 mLk-d~G~~~viiGHSER--R~~~~E---~~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
.|+ ++|++.|=+.|+-. -.++.. .-+.+.+=+..|.++||.+|+.+-.
T Consensus 46 ~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~ 99 (291)
T 1egz_A 46 SLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHS 99 (291)
T ss_dssp HHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467 89999998877521 011111 0123444589999999999998854
No 189
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=63.13 E-value=11 Score=31.35 Aligned_cols=51 Identities=10% Similarity=0.082 Sum_probs=38.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEc-CCCCcccHHHHh---cCCCCCEEEeec
Q 039862 96 VATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYG-GSVNGANCKELA---AQPDVDGFLVGG 154 (173)
Q Consensus 96 ~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYG-GSV~~~n~~~~~---~~~~vDG~LiG~ 154 (173)
+.|.++-.++++...+.. +..+||+.| |+-+...+.++. ...++||+|+--
T Consensus 57 ~Ls~~Er~~v~~~~~~~~--------~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 57 AITDDERDVLTRTILEHV--------AGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp GSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cCCHHHHHHHHHHHHHHh--------CCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 467887777777776653 356999998 667777776654 467999999965
No 190
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=62.79 E-value=5.2 Score=31.57 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=36.3
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 91 IGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 91 IGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
-|||++.+-+.+... + ....|++-.|+++|+|+.+.+ ..+.+|+=|.+.
T Consensus 128 gGtG~~fdW~~l~~~------~---------~~~~p~~LAGGL~peNV~~ai-~~~p~gVDvsSG 176 (203)
T 1v5x_A 128 PGSGEAYPRAWAKPL------L---------ATGRRVILAGGIAPENLEEVL-ALRPYALDLASG 176 (203)
T ss_dssp TTSCCCCCGGGGHHH------H---------HTTSCEEECSSCCSTTHHHHH-HHCCSEEEESGG
T ss_pred CCCCCccCHHHHHhh------h---------ccCCcEEEECCCCHHHHHHHH-hcCCCEEEeCCc
Confidence 589999887665431 1 113689999999999998877 667788877653
No 191
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=62.36 E-value=17 Score=28.36 Aligned_cols=106 Identities=15% Similarity=0.136 Sum_probs=53.7
Q ss_pred cchhhcCCCEEEEccccccc------c------cCCCHHHHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSERRA------L------LNESNDFVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQT 68 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~------~------~~E~~~~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql 68 (173)
+.|++.|++.+.+.=+-... + ..+.-+.+.+-++.|.+.|...|++ .| ...........+.+.+.|
T Consensus 55 ~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l 133 (269)
T 3ngf_A 55 RELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENF 133 (269)
T ss_dssp HHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHH
Confidence 35778888877553111100 0 0122345677788999999988776 55 211110011223333333
Q ss_pred HHHHhccCCCCCeEEEEccccccc--CCCCCCHHHHHHHHHHH
Q 039862 69 KAIAEKISNWDNVVLAYEPVWAIG--TGKVATPAQAQEVHAEL 109 (173)
Q Consensus 69 ~~~l~~v~~~~~iiIAYEPvwAIG--tG~~a~~e~i~~~~~~I 109 (173)
+.+.... ....+.++|||..--. +....+++++.++++.+
T Consensus 134 ~~l~~~a-~~~Gv~l~lE~~n~~~~~~~~~~~~~~~~~l~~~v 175 (269)
T 3ngf_A 134 RYAADKL-APHGITVLVEPLNTRNMPGYFIVHQLEAVGLVKRV 175 (269)
T ss_dssp HHHHHHH-GGGTCEEEECCCCTTTSTTBSCCCHHHHHHHHHHH
T ss_pred HHHHHHH-HHcCCEEEEeeCCcccCccchhcCHHHHHHHHHHh
Confidence 3333211 1335889999954221 22335677766655544
No 192
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=62.24 E-value=4.3 Score=37.44 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=35.4
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
++||+-.|++ +++.+.+++..-.+|++.+|++.+ +|+ +.++.
T Consensus 291 ~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~ 335 (729)
T 1o94_A 291 KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVE 335 (729)
T ss_dssp SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHH
Confidence 5999999999 588999999988899999999988 577 44443
No 193
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=62.21 E-value=8.1 Score=30.29 Aligned_cols=45 Identities=29% Similarity=0.295 Sum_probs=33.2
Q ss_pred cceEEEcCCCCc------ccHHHHhcCCCCCEEEeecccCC-hH-HHHHHHHH
Q 039862 124 STRIIYGGSVNG------ANCKELAAQPDVDGFLVGGASLK-PE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~------~n~~~~~~~~~vDG~LiG~asl~-~~-f~~Ii~~~ 168 (173)
++||..++..++ +...+.+...++||+.++..... +. +.+.++..
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~ 132 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREE 132 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHH
T ss_pred CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHh
Confidence 368888887787 66777777799999999976654 33 66666554
No 194
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=61.59 E-value=43 Score=27.60 Aligned_cols=124 Identities=15% Similarity=0.219 Sum_probs=67.6
Q ss_pred hhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEE
Q 039862 5 VNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLA 84 (173)
Q Consensus 5 kd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIA 84 (173)
+.+|++.|++=-+ .+ +++.+..=...|.+.||.+++-|=...| ++.++. ...-+|-
T Consensus 123 r~~GADaILLI~a----~L--~~~~l~~l~~~A~~lGl~~LvEVh~~~E--------------l~rAl~----~~a~iIG 178 (258)
T 4a29_A 123 YNLGADTVLLIVK----IL--TERELESLLEYARSYGMEPLILINDEND--------------LDIALR----IGARFIG 178 (258)
T ss_dssp HHHTCSEEEEEGG----GS--CHHHHHHHHHHHHHTTCCCEEEESSHHH--------------HHHHHH----TTCSEEE
T ss_pred HHcCCCeeehHHh----hc--CHHHHHHHHHHHHHHhHHHHHhcchHHH--------------HHHHhc----CCCcEEE
Confidence 4568888766322 11 2344555578999999999998865432 334443 1122232
Q ss_pred EcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC-hH-HH
Q 039862 85 YEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PE-FI 162 (173)
Q Consensus 85 YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~-~~-f~ 162 (173)
+=-. =.-|-. .+.+...+. . ... ..++.++--++|+..+....+...|+||+|||.+-++ ++ ..
T Consensus 179 INNR-nL~tf~-vdl~~t~~L----~----~~i----p~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~~~ 244 (258)
T 4a29_A 179 IMSR-DFETGE-INKENQRKL----I----SMI----PSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKIK 244 (258)
T ss_dssp ECSB-CTTTCC-BCHHHHHHH----H----TTS----CTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTHHH
T ss_pred EeCC-Cccccc-cCHHHHHHH----H----hhC----CCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcHHH
Confidence 2110 001111 233332222 1 112 2346667766776666555666789999999998775 33 44
Q ss_pred HHHH
Q 039862 163 DIIK 166 (173)
Q Consensus 163 ~Ii~ 166 (173)
++++
T Consensus 245 ~Li~ 248 (258)
T 4a29_A 245 ELIE 248 (258)
T ss_dssp HHHC
T ss_pred HHHc
Confidence 4443
No 195
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=61.43 E-value=15 Score=29.01 Aligned_cols=103 Identities=19% Similarity=0.176 Sum_probs=52.3
Q ss_pred chhhcCCCEEEEccccccc-ccCCCH--------HHHHHHHHHHHHCCCeEEEEeCCCH-HHHhcCChHHHHHHHHHHHH
Q 039862 3 MLVNLSIPWVILGHSERRA-LLNESN--------DFVGDKVAYALSRGLKVIACVGETL-EQRESGSTVAVVAEQTKAIA 72 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~-~~~E~~--------~~i~~Kv~~al~~gl~pIlCvGE~~-~~r~~~~~~~~l~~Ql~~~l 72 (173)
+|++.|++.+-+.-+-.+. .+...+ +.+.+-++.|.+.|...|++.|-.. .........+.+.+.+..+.
T Consensus 74 ~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 153 (295)
T 3cqj_A 74 AIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESV 153 (295)
T ss_dssp HHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 5677788776543121111 133222 4466778888899998887765321 00000012223333333332
Q ss_pred hccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 73 EKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 73 ~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
+... ...+.+++||.+ +....+++++.++++.+
T Consensus 154 ~~a~-~~Gv~l~lEn~~---~~~~~~~~~~~~l~~~v 186 (295)
T 3cqj_A 154 EMAS-RAQVTLAMEIMD---YPLMNSISKALGYAHYL 186 (295)
T ss_dssp HHHH-HHTCEEEEECCS---SGGGCSHHHHHHHHHHH
T ss_pred HHHH-HhCCEEEEeeCC---CcccCCHHHHHHHHHhc
Confidence 2111 234789999986 22235677766655544
No 196
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=61.33 E-value=16 Score=29.57 Aligned_cols=46 Identities=9% Similarity=0.055 Sum_probs=29.7
Q ss_pred cchhhcCCC---EEEEcccccccccCCCH--------HHHHHHHHHHHHCCCeEEEE
Q 039862 2 EMLVNLSIP---WVILGHSERRALLNESN--------DFVGDKVAYALSRGLKVIAC 47 (173)
Q Consensus 2 ~mLkd~G~~---~viiGHSERR~~~~E~~--------~~i~~Kv~~al~~gl~pIlC 47 (173)
++|++.|++ .+-+.|.-+...+.-.+ +.+.+-++.|.+.|...|++
T Consensus 72 ~~l~~~gL~~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~ 128 (335)
T 2qw5_A 72 HYLDSEGLENVKISTNVGATRTFDPSSNYPEQRQEALEYLKSRVDITAALGGEIMMG 128 (335)
T ss_dssp HHHHHTTCTTCEEEEECCCCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHCCCCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEec
Confidence 357888998 76655643322232212 45667788899999998865
No 197
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=61.26 E-value=6 Score=35.12 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=27.5
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+-.|+| +++++.+.+. .+.|++.+|++-+
T Consensus 332 ~iPVIa~GGI~~~~di~kal~-~GAd~V~vGs~~~ 365 (490)
T 4avf_A 332 GVPLIADGGIRFSGDLAKAMV-AGAYCVMMGSMFA 365 (490)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-HTCSEEEECTTTT
T ss_pred CCcEEEeCCCCCHHHHHHHHH-cCCCeeeecHHHh
Confidence 5999998888 7888887776 5899999999744
No 198
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=61.14 E-value=45 Score=26.14 Aligned_cols=103 Identities=18% Similarity=0.135 Sum_probs=53.6
Q ss_pred cchhhcCCCEEEEcccc------cccccCCC-------HHHHHHHHHHHHHCCCeEEEEe--CCCHHHHhcCChHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSE------RRALLNES-------NDFVGDKVAYALSRGLKVIACV--GETLEQRESGSTVAVVAE 66 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSE------RR~~~~E~-------~~~i~~Kv~~al~~gl~pIlCv--GE~~~~r~~~~~~~~l~~ 66 (173)
+.|++.|++.+-+ |+. ...+.+.+ -+.+.+-++.|.+.|...|++. |.... .......+.+.+
T Consensus 75 ~~l~~~gl~~~~~-~~~~p~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~g~~~~-~~~~~~~~~~~~ 152 (290)
T 2zvr_A 75 ILSEELNLPICAI-GTGQAYLADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGALVIIGLVRGRREG-RSYEETEELFIE 152 (290)
T ss_dssp HHHHHHTCCEEEE-ECTHHHHTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEESGGGCCCTT-SCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEE-eccCccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCCCCC-cCHHHHHHHHHH
Confidence 3577788887444 330 11222222 2456677888899999988754 54110 000012233334
Q ss_pred HHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 67 QTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 67 Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
.++.+.+.. .+ +.+++||..--.+....+++++.++++.+
T Consensus 153 ~l~~l~~~a--~~-v~l~lEn~~~~~~~~~~~~~~~~~l~~~~ 192 (290)
T 2zvr_A 153 SMKRLLELT--EH-AKFVIEPLNRYETDFINTIDDALRILRKI 192 (290)
T ss_dssp HHHHHHHHC--SS-CCEEECCCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHh--cc-CEEEEEeCCCcCccccCCHHHHHHHHHHc
Confidence 444443322 23 89999997311233445677766665554
No 199
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=61.06 E-value=42 Score=26.61 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=31.4
Q ss_pred chh-hcCCCEEEEccccc---ccccC---C-CHHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 3 MLV-NLSIPWVILGHSER---RALLN---E-SNDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 3 mLk-d~G~~~viiGHSER---R~~~~---E-~~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
.|+ +.|++.|=+.|+-. -.+.. | .-+.+.+=+..|.++||.+|+.+-.
T Consensus 46 ~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~ 101 (293)
T 1tvn_A 46 KAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHS 101 (293)
T ss_dssp HHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467 69999998877531 11221 1 1123445589999999999998754
No 200
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=59.05 E-value=5.9 Score=34.85 Aligned_cols=46 Identities=11% Similarity=0.028 Sum_probs=34.9
Q ss_pred CcceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC--hH-HHHHHHHHh
Q 039862 123 ASTRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK--PE-FIDIIKSAT 169 (173)
Q Consensus 123 ~~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~--~~-f~~Ii~~~~ 169 (173)
.++||+.-|+|.... +.+.+. .+.|+|.||++.+. |. |.+|.+.+.
T Consensus 344 ~~iPIIg~GGI~s~eDa~e~l~-aGAd~VqIgra~l~~GP~~~~~i~~~L~ 393 (415)
T 3i65_A 344 KQIPIIASGGIFSGLDALEKIE-AGASVCQLYSCLVFNGMKSAVQIKRELN 393 (415)
T ss_dssp TCSCEEECSSCCSHHHHHHHHH-HTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHHhcCHHHHHHHHHHHH
Confidence 369999977776654 667776 79999999999874 56 777776654
No 201
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=57.70 E-value=14 Score=30.01 Aligned_cols=33 Identities=12% Similarity=0.232 Sum_probs=25.7
Q ss_pred ceEEEcCCCCcc-------cHHHHhcCCCCCEEEeecccCC
Q 039862 125 TRIIYGGSVNGA-------NCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 125 i~ilYGGSV~~~-------n~~~~~~~~~vDG~LiG~asl~ 158 (173)
+||+-=|+++.+ |+.+.+. .+.||+.+|++-++
T Consensus 197 ~pV~asGGi~~~~~~~~l~~i~~~~~-aGA~GvsvgraI~~ 236 (263)
T 1w8s_A 197 VPVLMSGGPKTKTEEDFLKQVEGVLE-AGALGIAVGRNVWQ 236 (263)
T ss_dssp SCEEEECCSCCSSHHHHHHHHHHHHH-TTCCEEEESHHHHT
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEEehhhcC
Confidence 488887778765 5555555 79999999998886
No 202
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=57.51 E-value=6.1 Score=33.58 Aligned_cols=39 Identities=8% Similarity=0.135 Sum_probs=34.7
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC-ChHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFI 162 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl-~~~f~ 162 (173)
..+++.||..+++.+.+++..-.+|.|.+||+.+ +|+|.
T Consensus 286 ~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp 325 (358)
T 4a3u_A 286 KPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLP 325 (358)
T ss_dssp CSCEEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHH
T ss_pred CCcEEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHH
Confidence 4789999999999999999988899999999988 57754
No 203
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=57.36 E-value=5.1 Score=36.54 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=35.5
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC-ChH-HHHHH
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL-KPE-FIDII 165 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl-~~~-f~~Ii 165 (173)
++||+.-|+++ ++.+.+++..-.+|++.+|++.+ +|+ |.++.
T Consensus 294 ~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~ 338 (690)
T 3k30_A 294 TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIR 338 (690)
T ss_dssp SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHH
Confidence 58999988886 78899999988899999999988 588 55554
No 204
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=57.21 E-value=5.3 Score=33.30 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=40.8
Q ss_pred eEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeeccc
Q 039862 81 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 81 iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~as 156 (173)
.+|..-|. +|+.++++++.++ .++|+.-=|+|+++|+.+++. .++|++-||++-
T Consensus 218 D~I~ld~~---------~~~~~k~av~~v~------------~~ipi~AsGGIt~eni~~~a~-tGvD~IsVgs~~ 271 (286)
T 1x1o_A 218 DLILLDNF---------PLEALREAVRRVG------------GRVPLEASGNMTLERAKAAAE-AGVDYVSVGALT 271 (286)
T ss_dssp SEEEEESC---------CHHHHHHHHHHHT------------TSSCEEEESSCCHHHHHHHHH-HTCSEEECTHHH
T ss_pred CEEEECCC---------CHHHHHHHHHHhC------------CCCeEEEEcCCCHHHHHHHHH-cCCCEEEEcHHH
Confidence 46666663 6777776655432 248899899999999999887 789999998743
No 205
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=56.99 E-value=5.6 Score=33.91 Aligned_cols=45 Identities=27% Similarity=0.225 Sum_probs=33.6
Q ss_pred cceEEEcCCCCc-ccHHHHhcCCCCCEEEeecc-cC-ChH-HHHHHHHHh
Q 039862 124 STRIIYGGSVNG-ANCKELAAQPDVDGFLVGGA-SL-KPE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~~-~n~~~~~~~~~vDG~LiG~a-sl-~~~-f~~Ii~~~~ 169 (173)
++||+--|+|.. +.+.+++. .+.|+|.||++ .+ +|. |.+|.+.+.
T Consensus 275 ~ipIIg~GGI~s~~da~~~l~-aGAd~V~igra~~~~gP~~~~~i~~~L~ 323 (345)
T 3oix_A 275 SIQIIGTGGVXTGRDAFEHIL-CGASMVQIGTALHQEGPQIFKRITKELX 323 (345)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred CCcEEEECCCCChHHHHHHHH-hCCCEEEEChHHHhcChHHHHHHHHHHH
Confidence 699998777765 55677775 78999999999 44 366 777776553
No 206
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=56.74 E-value=8.4 Score=28.03 Aligned_cols=54 Identities=9% Similarity=0.137 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-Cc-ccH---HHHhcCCCCCEEEeecccCC
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NG-ANC---KELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~-~n~---~~~~~~~~vDG~LiG~asl~ 158 (173)
.+.+.+.++++.+|+. + .++++|+.||.. .+ +.. .+.+...++|+++--+....
T Consensus 66 ~~~~~~~~~i~~l~~~-----g---~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~~~~ 124 (137)
T 1ccw_A 66 QGEIDCKGLRQKCDEA-----G---LEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTPPE 124 (137)
T ss_dssp THHHHHTTHHHHHHHT-----T---CTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCCHH
T ss_pred CcHHHHHHHHHHHHhc-----C---CCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCCCHH
Confidence 4466677777777653 1 235999999984 33 333 56788899999996665443
No 207
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=56.53 E-value=27 Score=28.72 Aligned_cols=45 Identities=16% Similarity=-0.025 Sum_probs=33.0
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH-HHHHHHHH
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~-f~~Ii~~~ 168 (173)
++|||..+.+.+.--..-+...|.|++|++-+.|+++ ..++++.+
T Consensus 120 ~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a 165 (272)
T 3tsm_A 120 SLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTA 165 (272)
T ss_dssp SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHH
T ss_pred CCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHH
Confidence 5999998876666544445678999999999999853 55555443
No 208
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=56.34 E-value=6.6 Score=33.62 Aligned_cols=45 Identities=20% Similarity=0.173 Sum_probs=34.7
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC--hH-HHHHHHHHh
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK--PE-FIDIIKSAT 169 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~--~~-f~~Ii~~~~ 169 (173)
++||+.-|+|. .+.+.+.+. .+.|+|.||++.+. |. |.+|.+.+.
T Consensus 277 ~ipII~~GGI~s~~da~~~l~-aGAd~V~vgra~l~~GP~~~~~i~~~l~ 325 (354)
T 4ef8_A 277 GKLIFGCGGVYTGEDAFLHVL-AGASMVQVGTALQEEGPSIFERLTSELL 325 (354)
T ss_dssp TSEEEEESCCCSHHHHHHHHH-HTEEEEEECHHHHHHCTTHHHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHH-cCCCEEEEhHHHHHhCHHHHHHHHHHHH
Confidence 59999988776 556777775 79999999999884 55 777776553
No 209
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=55.74 E-value=8.3 Score=33.49 Aligned_cols=50 Identities=30% Similarity=0.395 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 100 AQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 100 e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
.+..+..+.+|+.+.+. | ..+++|...|+++.+|+.++... +|.+=||..
T Consensus 248 gd~~~~v~~~r~~ld~~-G---~~~~~I~aSggl~~~~i~~l~~~--vD~~gvGt~ 297 (395)
T 2i14_A 248 GNFRKIIEEVRWELKVR-G---YDWVKIFVSGGLDEEKIKEIVDV--VDAFGVGGA 297 (395)
T ss_dssp SCHHHHHHHHHHHHHHT-T---CCSCEEEEESSCCHHHHHTTGGG--CSEEEECHH
T ss_pred ccHHHHHHHHHHHHHhC-C---CCceEEEEECCCCHHHHHHHHHh--CCEEEeCcc
Confidence 66777777888777553 2 13589999999999999999998 999999873
No 210
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=55.73 E-value=30 Score=26.84 Aligned_cols=77 Identities=14% Similarity=0.184 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHH
Q 039862 29 FVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHA 107 (173)
Q Consensus 29 ~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~ 107 (173)
.+.+-++.|.+.|...|++ .|..... ......+.+.+.++.+.+ ....+.+++||.+--++-...+++++.++++
T Consensus 90 ~~~~~i~~A~~lG~~~v~~~~g~~~~~-~~~~~~~~~~~~l~~l~~---~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 165 (287)
T 2x7v_A 90 LLKKEVEICRKLGIRYLNIHPGSHLGT-GEEEGIDRIVRGLNEVLN---NTEGVVILLENVSQKGGNIGYKLEQLKKIRD 165 (287)
T ss_dssp HHHHHHHHHHHHTCCEEEECCEECTTS-CHHHHHHHHHHHHHHHHT---TCCSCEEEEECCCCCTTEECSSHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCC-CHHHHHHHHHHHHHHHHc---ccCCCEEEEeCCCCCCCccCCCHHHHHHHHH
Confidence 4556678888889887765 3532110 000112333344444443 2357899999986333222347887777666
Q ss_pred HH
Q 039862 108 EL 109 (173)
Q Consensus 108 ~I 109 (173)
.+
T Consensus 166 ~~ 167 (287)
T 2x7v_A 166 LV 167 (287)
T ss_dssp HC
T ss_pred hc
Confidence 54
No 211
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=54.55 E-value=28 Score=26.67 Aligned_cols=80 Identities=16% Similarity=0.035 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHCCCeEEEEeC-CCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHH
Q 039862 28 DFVGDKVAYALSRGLKVIACVG-ETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVH 106 (173)
Q Consensus 28 ~~i~~Kv~~al~~gl~pIlCvG-E~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~ 106 (173)
+.+.+-++.|.+.|...|++.+ ............+.+.+.++.+.+... ...+.+++||.+--++ ...+++++.+++
T Consensus 84 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~gv~l~lEn~~~~~~-~~~~~~~~~~l~ 161 (278)
T 1i60_A 84 TEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAE-PYGVKIALEFVGHPQC-TVNTFEQAYEIV 161 (278)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCCTTB-SSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEecCCccc-hhcCHHHHHHHH
Confidence 3455667777888887776643 211000000112333344443332211 2358899999874433 446777777666
Q ss_pred HHH
Q 039862 107 AEL 109 (173)
Q Consensus 107 ~~I 109 (173)
+.+
T Consensus 162 ~~~ 164 (278)
T 1i60_A 162 NTV 164 (278)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 212
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=54.32 E-value=33 Score=26.80 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHH
Q 039862 28 DFVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVH 106 (173)
Q Consensus 28 ~~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~ 106 (173)
+.+.+-++.|.+.|...|++ .|-..+. .....+.+.+.++.+..... ...+.+++||.. -+++++.+++
T Consensus 102 ~~~~~~i~~a~~lG~~~v~~~~G~~~~~--~~~~~~~~~~~l~~l~~~a~-~~Gv~l~lE~~~-------~~~~~~~~l~ 171 (290)
T 3tva_A 102 AEMKEISDFASWVGCPAIGLHIGFVPES--SSPDYSELVRVTQDLLTHAA-NHGQAVHLETGQ-------ESADHLLEFI 171 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCCT--TSHHHHHHHHHHHHHHHHHH-TTTCEEEEECCS-------SCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCccc--chHHHHHHHHHHHHHHHHHH-HcCCEEEEecCC-------CCHHHHHHHH
Confidence 55677788899999998887 4532111 11223334444444433211 345889999974 3566665555
Q ss_pred HHH
Q 039862 107 AEL 109 (173)
Q Consensus 107 ~~I 109 (173)
+.+
T Consensus 172 ~~~ 174 (290)
T 3tva_A 172 EDV 174 (290)
T ss_dssp HHH
T ss_pred Hhc
Confidence 443
No 213
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=54.25 E-value=13 Score=32.28 Aligned_cols=51 Identities=20% Similarity=0.296 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 100 AQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 100 e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
.+..+..+.+|+.+.+. | ..+++|...|+++.+|+.++... ++|.+=||..
T Consensus 250 gd~~~~v~~v~~~ld~~-G---~~~~~I~aSggl~~~~i~~l~~~-GvD~~gvGt~ 300 (398)
T 2i1o_A 250 GNFEALIREVRWELALR-G---RSDIKIMVSGGLDENTVKKLREA-GAEAFGVGTS 300 (398)
T ss_dssp SCHHHHHHHHHHHHHHT-T---CTTSEEEEESSCCHHHHHHHHHT-TCCEEEECHH
T ss_pred ccHHHHHHHHHHHHHhC-C---CCceEEEEeCCCCHHHHHHHHHc-CCCEEEeCcc
Confidence 66777777788776553 2 13589999999999999999985 6899999973
No 214
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=53.53 E-value=31 Score=27.37 Aligned_cols=76 Identities=17% Similarity=0.137 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHHHHHHhccCC-CCCeEEEEcccccccCCCCCCHHHHHHHH
Q 039862 29 FVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQTKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVH 106 (173)
Q Consensus 29 ~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~-~~~iiIAYEPvwAIGtG~~a~~e~i~~~~ 106 (173)
.+.+-++.|.+.|...|++ .|-.. +...+.-.+++...+..+.. ...+.|++||..--++-...+++++.+++
T Consensus 95 ~~~~~i~~A~~lGa~~vv~h~g~~~-----~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~~li 169 (303)
T 3aal_A 95 FLRAEIERTEAIGAKQLVLHPGAHV-----GAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELAYII 169 (303)
T ss_dssp HHHHHHHHHHHHTCSEEEECCEECT-----TSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCcCC-----CCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHHHHH
Confidence 3445567777788777655 34221 11122222333333433321 25789999998533332234788877766
Q ss_pred HHH
Q 039862 107 AEL 109 (173)
Q Consensus 107 ~~I 109 (173)
+.+
T Consensus 170 ~~v 172 (303)
T 3aal_A 170 DGV 172 (303)
T ss_dssp HHC
T ss_pred Hhc
Confidence 655
No 215
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=53.17 E-value=7.7 Score=32.31 Aligned_cols=54 Identities=13% Similarity=0.094 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcc-chhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC
Q 039862 97 ATPAQAQEVHAELRKWLKDNV-SAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~-~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.+|+++.++.+.++. .+ | ..+++|.-=|+|+++|+.+++. .++|++=+|++-.+
T Consensus 228 ~~~~~l~~~v~~l~~----~~~g---~~~v~I~ASGGIt~~ni~~~~~-~GvD~i~vGs~i~~ 282 (294)
T 3c2e_A 228 FKGDGLKMCAQSLKN----KWNG---KKHFLLECSGGLNLDNLEEYLC-DDIDIYSTSSIHQG 282 (294)
T ss_dssp ----------------------------CCEEEEECCCCC------CC-CSCSEEECGGGTSS
T ss_pred CCHHHHHHHHHHhcc----cccC---CCCeEEEEECCCCHHHHHHHHH-cCCCEEEEechhcC
Confidence 357777776655432 10 0 1348899999999999999886 78999999987443
No 216
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=52.95 E-value=1.1e+02 Score=28.10 Aligned_cols=107 Identities=9% Similarity=0.109 Sum_probs=62.0
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEe---CCCHHHHhcCChHHHHHHHHHHHHhccCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACV---GETLEQRESGSTVAVVAEQTKAIAEKISNW 78 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCv---GE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~ 78 (173)
+++|++|++.+=+-| +-+.+.. +..|-+.||.++.-+ |.. .... .+...+++..++.... .
T Consensus 325 ~l~k~~G~N~iR~~h------~p~~~~~----~dlcDe~Gi~V~~E~~~~~~~----~~~~-~~~~~~~~~~~v~r~r-N 388 (692)
T 3fn9_A 325 AAIMDVGATTVRFAH------YQQSDYL----YSRCDTLGLIIWAEIPCVNRV----TGYE-TENAQSQLRELIRQSF-N 388 (692)
T ss_dssp HHHHHHTCCEEEETT------SCCCHHH----HHHHHHHTCEEEEECCCBSCC----CSSC-HHHHHHHHHHHHHHHT-T
T ss_pred HHHHHCCCCEEEecC------CCCcHHH----HHHHHHCCCEEEEcccccCCC----CCHH-HHHHHHHHHHHHHHhc-C
Confidence 478999999998877 2345555 789999999988533 221 1112 5556677777765433 2
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV 133 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV 133 (173)
.+-||. |.+|.=.....+......+.+.+++++.. ..-|+.|+..-
T Consensus 389 HPSIi~----Ws~gNE~~~~~~~~~~~~~~l~~~~k~~D-----ptRpvt~~~~~ 434 (692)
T 3fn9_A 389 HPSIYV----WGLHNEVYQPHEYTAALTRSLHDLAKTED-----PDRYTVSVNGY 434 (692)
T ss_dssp CTTEEE----EEEEESCCSSHHHHHHHHHHHHHHHHHHC-----TTSEEEEEESS
T ss_pred CCcceE----EEeccccCcccccHHHHHHHHHHHHHHHC-----CCCCEEEeCCC
Confidence 344443 77774322222333444555555555542 23556665543
No 217
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=52.64 E-value=88 Score=25.03 Aligned_cols=51 Identities=20% Similarity=0.038 Sum_probs=34.0
Q ss_pred cchhhcCCCEEEEccccccccc----CCC----HHHHHHHHHHHHHCCCeEEEEeCCCH
Q 039862 2 EMLVNLSIPWVILGHSERRALL----NES----NDFVGDKVAYALSRGLKVIACVGETL 52 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~----~E~----~~~i~~Kv~~al~~gl~pIlCvGE~~ 52 (173)
+.||++|++.|=+.-+=.|..- ... -+.+.+=+..|.++||.+|+.+-...
T Consensus 48 ~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~ 106 (320)
T 3nco_A 48 KIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFE 106 (320)
T ss_dssp HHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCH
T ss_pred HHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCc
Confidence 4689999999987644333210 111 23344557889999999999997654
No 218
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=52.04 E-value=22 Score=29.63 Aligned_cols=46 Identities=9% Similarity=0.024 Sum_probs=31.7
Q ss_pred cchhhcCCCEEEEc-ccccccccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVILG-HSERRALLNESNDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~viiG-HSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+.||++|+++|=+. +-+.+-- .-+.+.+.+.+++|.++||++++-+
T Consensus 34 ~ilk~~G~n~vRlri~v~P~~g-~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 34 TILADAGINSIRQRVWVNPSDG-SYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp HHHHHHTCCEEEEEECSCCTTC-TTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCCEEEEEEEECCCCC-ccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35899999999882 1000111 1234567778899999999999986
No 219
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=51.90 E-value=98 Score=26.97 Aligned_cols=49 Identities=12% Similarity=-0.006 Sum_probs=32.1
Q ss_pred cchhhcCCCEEEEcccccccc----------------cCC-CHHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 2 EMLVNLSIPWVILGHSERRAL----------------LNE-SNDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~----------------~~E-~~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
+.+++.|++.|=+--+-.|.. .++ .-+.+.+=+..|.++||.+|++.=.
T Consensus 91 ~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~ 156 (458)
T 3qho_A 91 LQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHR 156 (458)
T ss_dssp HHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 357889998886654433211 011 1244566689999999999998843
No 220
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=50.84 E-value=32 Score=26.27 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=54.2
Q ss_pred cchhhcCCCEEEEccccc------ccccC------CCHHHHHHHHHHHHHCCCeEEEE-eCCCHHHHhcCChHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSER------RALLN------ESNDFVGDKVAYALSRGLKVIAC-VGETLEQRESGSTVAVVAEQT 68 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSER------R~~~~------E~~~~i~~Kv~~al~~gl~pIlC-vGE~~~~r~~~~~~~~l~~Ql 68 (173)
+.|++.|++.+.++-+-. +.... +.-+.+.+-++.|.+.|...|++ .|............+.+.+.+
T Consensus 47 ~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l 126 (260)
T 1k77_A 47 KQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNI 126 (260)
T ss_dssp HHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHH
T ss_pred HHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHH
Confidence 357888888775532110 01111 12345677788999999988876 454211100001122333334
Q ss_pred HHHHhccCCCCCeEEEEccccccc--CCCCCCHHHHHHHHHHH
Q 039862 69 KAIAEKISNWDNVVLAYEPVWAIG--TGKVATPAQAQEVHAEL 109 (173)
Q Consensus 69 ~~~l~~v~~~~~iiIAYEPvwAIG--tG~~a~~e~i~~~~~~I 109 (173)
+.+.+... ...+.+++||.---+ +....+++++.++++.+
T Consensus 127 ~~l~~~a~-~~gv~l~~E~~~~~~~~~~~~~~~~~~~~l~~~~ 168 (260)
T 1k77_A 127 RYAADRFA-PHGKRILVEALSPGVKPHYLFSSQYQALAIVEEV 168 (260)
T ss_dssp HHHHHHHG-GGTCEEEECCCCTTTSTTBSCCSHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCEEEEEeCCccCCCcCccCCHHHHHHHHHHh
Confidence 43332211 235889999972111 23345677765555443
No 221
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=49.82 E-value=15 Score=30.67 Aligned_cols=46 Identities=24% Similarity=0.313 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
.+++++.++.+.+ ..+++|.-=|+|+++|+.+++. .++|++=+|+.
T Consensus 237 ~~~e~l~~~v~~~------------~~~~~I~ASGGIt~~~i~~~a~-~GvD~isvGsl 282 (296)
T 1qap_A 237 FNTDQMREAVKRV------------NGQARLEVSGNVTAETLREFAE-TGVDFISVGAL 282 (296)
T ss_dssp CCHHHHHHHHHTT------------CTTCCEEECCCSCHHHHHHHHH-TTCSEEECSHH
T ss_pred CCHHHHHHHHHHh------------CCCCeEEEECCCCHHHHHHHHH-cCCCEEEEeHH
Confidence 7888887765542 1358899999999999999987 78999999974
No 222
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=49.46 E-value=1.1e+02 Score=25.08 Aligned_cols=115 Identities=22% Similarity=0.155 Sum_probs=59.9
Q ss_pred hhcCCCEEEEcccccc-ccc-CC-CHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 5 VNLSIPWVILGHSERR-ALL-NE-SNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 5 kd~G~~~viiGHSERR-~~~-~E-~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
++.|++.|=+-|.... .++ ++ .-+.+.+=+..|.++||.+|+.+-..... ......+......+.+.........
T Consensus 79 ~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~-~~~~~~~~~~~~w~~~a~r~k~~p~- 156 (327)
T 3pzt_A 79 DDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDG-NPNQNKEKAKEFFKEMSSLYGNTPN- 156 (327)
T ss_dssp HHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSC-STTTTHHHHHHHHHHHHHHHTTCTT-
T ss_pred HhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCC-CchHHHHHHHHHHHHHHHHhCCCCc-
Confidence 7899999988776431 111 11 12345556899999999999988643210 1112222223333333332222333
Q ss_pred EEEEc----ccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC
Q 039862 82 VLAYE----PVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS 132 (173)
Q Consensus 82 iIAYE----PvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS 132 (173)
|| || |..-. +-...-.+..+++.+.||+. ..+-+|++||.
T Consensus 157 Vi-~el~NEp~~~~-~w~~~~~~~~~~~~~~IR~~---------dp~~~I~v~~~ 200 (327)
T 3pzt_A 157 VI-YEIANEPNGDV-NWKRDIKPYAEEVISVIRKN---------DPDNIIIVGTG 200 (327)
T ss_dssp EE-EECCSCCCSSC-CTTTTHHHHHHHHHHHHHHH---------CSSSCEEECCH
T ss_pred EE-EEeccCCCCCc-ccHHHHHHHHHHHHHHHHhh---------CCCCEEEEeCC
Confidence 45 74 43100 00001134567777777765 34567888875
No 223
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=49.14 E-value=19 Score=26.25 Aligned_cols=29 Identities=31% Similarity=0.436 Sum_probs=23.9
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHHHHh
Q 039862 87 PVWAIGTGKVATPAQAQEVHAELRKWLKD 115 (173)
Q Consensus 87 PvwAIGtG~~a~~e~i~~~~~~Ir~~~~~ 115 (173)
|+|.-+.....++++.+++.+.||+.+++
T Consensus 107 ~vw~~~~~~~~~~eel~~~~~~ir~~L~~ 135 (137)
T 3ohe_A 107 PVWGKQPPVPYTEEQQASVKAKLQPLLEQ 135 (137)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 67766666778999999999999998764
No 224
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=48.90 E-value=32 Score=28.98 Aligned_cols=45 Identities=27% Similarity=0.285 Sum_probs=33.4
Q ss_pred cchhhcCCCEEEEc--------ccccccccC---CCHHHHHHHHHHHHHCCCeEEE
Q 039862 2 EMLVNLSIPWVILG--------HSERRALLN---ESNDFVGDKVAYALSRGLKVIA 46 (173)
Q Consensus 2 ~mLkd~G~~~viiG--------HSERR~~~~---E~~~~i~~Kv~~al~~gl~pIl 46 (173)
+.|++.||++|-|= ||.--..-. ++++.+...++.|.+.||.+++
T Consensus 60 ~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 60 RALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp HHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 35899999999883 332211111 3788999999999999999987
No 225
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=48.79 E-value=60 Score=24.77 Aligned_cols=73 Identities=14% Similarity=0.082 Sum_probs=35.8
Q ss_pred HHHHHHHHHHCCCeEEEEe-CCCHHHHhcCChHHHH-HHHHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHH
Q 039862 30 VGDKVAYALSRGLKVIACV-GETLEQRESGSTVAVV-AEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHA 107 (173)
Q Consensus 30 i~~Kv~~al~~gl~pIlCv-GE~~~~r~~~~~~~~l-~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~ 107 (173)
+.+-++.|.+.|...|++. |.... ...+.+ .+.++.+..... ...+.+++||.+ -.+....+++++.++++
T Consensus 87 ~~~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~l~~l~~~a~-~~gv~l~~E~~~-~~~~~~~~~~~~~~l~~ 159 (272)
T 2q02_A 87 TEGLLRDAQGVGARALVLCPLNDGT-----IVPPEVTVEAIKRLSDLFA-RYDIQGLVEPLG-FRVSSLRSAVWAQQLIR 159 (272)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSB-----CCCHHHHHHHHHHHHHHHH-TTTCEEEECCCC-STTCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEccCCCch-----hHHHHHHHHHHHHHHHHHH-HcCCEEEEEecC-CCcccccCHHHHHHHHH
Confidence 3444555666666665543 22110 112223 444444332211 245889999985 22234456777665554
Q ss_pred HH
Q 039862 108 EL 109 (173)
Q Consensus 108 ~I 109 (173)
.+
T Consensus 160 ~v 161 (272)
T 2q02_A 160 EA 161 (272)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 226
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=48.74 E-value=32 Score=26.66 Aligned_cols=105 Identities=9% Similarity=0.034 Sum_probs=52.0
Q ss_pred cchhhcCCCEEEEcc-cccccccCCC-------HHHHHHHHHHHHHCCCeEEEEe-----CCC-HHHHhcCChHHHHHHH
Q 039862 2 EMLVNLSIPWVILGH-SERRALLNES-------NDFVGDKVAYALSRGLKVIACV-----GET-LEQRESGSTVAVVAEQ 67 (173)
Q Consensus 2 ~mLkd~G~~~viiGH-SERR~~~~E~-------~~~i~~Kv~~al~~gl~pIlCv-----GE~-~~~r~~~~~~~~l~~Q 67 (173)
+.|++.|++.+.+.+ +-...+.+.+ -+.+.+-++.|.+.|...|++. |.+ .. ......+. .++
T Consensus 54 ~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~--~~~~~~~~-~~~ 130 (290)
T 2qul_A 54 AVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPL--DMKDKRPY-VDR 130 (290)
T ss_dssp HHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCT--TCCCCHHH-HHH
T ss_pred HHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC--CcccHHHH-HHH
Confidence 357788887765321 1111122222 1456677788888898877642 541 00 00111111 122
Q ss_pred HHHHHhccCC---CCCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 68 TKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 68 l~~~l~~v~~---~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
+...+..+.. ...+.+++||..--.+....+++++.++++.+
T Consensus 131 ~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 131 AIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp HHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHHHHHc
Confidence 2223332211 23588999997532334446777776655543
No 227
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=48.23 E-value=47 Score=25.56 Aligned_cols=47 Identities=17% Similarity=0.087 Sum_probs=28.6
Q ss_pred cchhhcCCCEEEE-ccccccc-------------ccCCC-HHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVIL-GHSERRA-------------LLNES-NDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~vii-GHSERR~-------------~~~E~-~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+.+|++|++.|=+ +|++-.. ..+++ -+.+..=+..|.++||.+|+++
T Consensus 49 ~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 49 KKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3588999998843 4433211 11121 1223333688999999999987
No 228
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=48.09 E-value=1.1e+02 Score=24.86 Aligned_cols=48 Identities=13% Similarity=0.021 Sum_probs=30.6
Q ss_pred cchhhcCCCEEEEcc-ccc--------ccccCCC-HHHHHHHHHHHHHCCCeEEEEeC
Q 039862 2 EMLVNLSIPWVILGH-SER--------RALLNES-NDFVGDKVAYALSRGLKVIACVG 49 (173)
Q Consensus 2 ~mLkd~G~~~viiGH-SER--------R~~~~E~-~~~i~~Kv~~al~~gl~pIlCvG 49 (173)
+++|++|++.|=+.| ++- .-.|+|. -+.+.+=+..|.++||.+|+++-
T Consensus 49 ~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~ 106 (373)
T 1rh9_A 49 QQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLV 106 (373)
T ss_dssp HHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 468999999998764 320 1112221 12233446789999999999863
No 229
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=47.36 E-value=8.5 Score=31.51 Aligned_cols=61 Identities=20% Similarity=0.270 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHhccchhhcCcceEE---EcCCCCcccHHHHhcC----CCCCEEEeecccCChH
Q 039862 99 PAQAQEVHAELRKWLKDNVSAEVAASTRII---YGGSVNGANCKELAAQ----PDVDGFLVGGASLKPE 160 (173)
Q Consensus 99 ~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il---YGGSV~~~n~~~~~~~----~~vDG~LiG~asl~~~ 160 (173)
.+.++++.++++.++.. |..-....+-|. |||-.-|.=+..+... .++.|++||+..+++.
T Consensus 122 ~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~~ 189 (255)
T 1whs_A 122 NRTAHDSYAFLAKWFER-FPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDY 189 (255)
T ss_dssp HHHHHHHHHHHHHHHHH-CGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBHH
T ss_pred HHHHHHHHHHHHHHHHh-CHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCHH
Confidence 35568889999998864 433322333333 7888888888888753 5789999999999863
No 230
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=47.08 E-value=11 Score=33.98 Aligned_cols=34 Identities=12% Similarity=0.188 Sum_probs=28.1
Q ss_pred cceEEEcCCCCc------------ccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVNG------------ANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~~------------~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.+||..||++.. +++.+++. .++|-+.||.+.++
T Consensus 327 ~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~-aGad~V~igt~~~~ 372 (555)
T 1jvn_A 327 FVPLTVGGGIKDIVDVDGTKIPALEVASLYFR-SGADKVSIGTDAVY 372 (555)
T ss_dssp CSCEEEESSCSCEECTTCCEECHHHHHHHHHH-HTCSEEEECHHHHH
T ss_pred CCcEEEeCccccchhcccccchHHHHHHHHHH-cCCCEEEECCHHhh
Confidence 599999999987 44677765 78999999998764
No 231
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=46.83 E-value=1.3e+02 Score=25.40 Aligned_cols=48 Identities=8% Similarity=0.051 Sum_probs=30.4
Q ss_pred cchhhcCCCEEEEcccccc---------------cccCCC-HHHHHHHHHHHHHCCCeEEEEeC
Q 039862 2 EMLVNLSIPWVILGHSERR---------------ALLNES-NDFVGDKVAYALSRGLKVIACVG 49 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR---------------~~~~E~-~~~i~~Kv~~al~~gl~pIlCvG 49 (173)
+++|++|++.|=+.+++.. -.++|. -+.+..=+..|.+.||.+|+++-
T Consensus 69 ~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 69 DNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp HHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCCEEEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 4689999999988633211 011111 11233447889999999999875
No 232
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=44.64 E-value=64 Score=24.68 Aligned_cols=79 Identities=11% Similarity=0.047 Sum_probs=39.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEccc-----ccccCCCCCCHHHHHH
Q 039862 30 VGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPV-----WAIGTGKVATPAQAQE 104 (173)
Q Consensus 30 i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPv-----wAIGtG~~a~~e~i~~ 104 (173)
+.+-++.|.+.|...|.+.--+..........+.+.+.|..+.... ....+.++|||. |-..+....+++++.+
T Consensus 86 ~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a-~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~~ 164 (281)
T 3u0h_A 86 LPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVEL-LPLGMRVGLEYVGPHHLRHRRYPFVQSLADLKT 164 (281)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHH-GGGTCEEEEECCCCGGGCCSSEECCCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHH-HHcCCEEEEEeccccccccccccccCCHHHHHH
Confidence 4456788889999877642111000000012233334444433221 134588999997 2222223456777666
Q ss_pred HHHHH
Q 039862 105 VHAEL 109 (173)
Q Consensus 105 ~~~~I 109 (173)
+++.+
T Consensus 165 l~~~v 169 (281)
T 3u0h_A 165 FWEAI 169 (281)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 55544
No 233
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=44.08 E-value=30 Score=28.81 Aligned_cols=27 Identities=11% Similarity=0.332 Sum_probs=21.3
Q ss_pred CCCCCEEEe------------ecccCChH-HHHHHHHHhh
Q 039862 144 QPDVDGFLV------------GGASLKPE-FIDIIKSATV 170 (173)
Q Consensus 144 ~~~vDG~Li------------G~asl~~~-f~~Ii~~~~~ 170 (173)
-.+.||++| |..||+++ |.++++.+..
T Consensus 232 A~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~~ 271 (285)
T 3sz8_A 232 AVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMKA 271 (285)
T ss_dssp HHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHHH
T ss_pred HhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHHH
Confidence 468999999 67888876 9888887654
No 234
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=43.95 E-value=35 Score=28.30 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=0.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEc-CCCCcccHHHHhc---CCCCCEEEe
Q 039862 92 GTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYG-GSVNGANCKELAA---QPDVDGFLV 152 (173)
Q Consensus 92 GtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYG-GSV~~~n~~~~~~---~~~vDG~Li 152 (173)
|-+-+.|.++-.++++...+.. +..+||+.| |+-+...+.++.+ ..++||+|+
T Consensus 68 GE~~~Ls~~Er~~v~~~~v~~~--------~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 124 (314)
T 3qze_A 68 GESATLDVEEHIQVIRRVVDQV--------KGRIPVIAGTGANSTREAVALTEAAKSGGADACLL 124 (314)
T ss_dssp GTGGGCCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred cChhhCCHHHHHHHHHHHHHHh--------CCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
No 235
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=43.74 E-value=1.6e+02 Score=28.60 Aligned_cols=106 Identities=11% Similarity=0.135 Sum_probs=61.0
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC-CH-------HHHhcCChHHHHHHHHHHHHh
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGE-TL-------EQRESGSTVAVVAEQTKAIAE 73 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE-~~-------~~r~~~~~~~~l~~Ql~~~l~ 73 (173)
+++|++|++.+=+-|-. ++... ...|-+.||..+..+.- +- .........+...+++...+.
T Consensus 379 ~lmK~~G~N~IR~~hyp------~~~~~----ydlcDe~Gi~V~~E~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~mV~ 448 (1010)
T 3bga_A 379 RLMKQHNINMVRNSHYP------THPYW----YQLCDRYGLYMIDEANIESHGMGYGPASLAKDSTWLTAHMDRTHRMYE 448 (1010)
T ss_dssp HHHHHTTCCEEEETTSC------CCHHH----HHHHHHHTCEEEEECSCBCGGGCSSTTCTTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEeCCCC------CCHHH----HHHHHHCCCEEEEccCccccCccccCCcCCCCHHHHHHHHHHHHHHHH
Confidence 46899999999776643 33333 68999999999876522 00 000112344555666666665
Q ss_pred ccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC
Q 039862 74 KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS 132 (173)
Q Consensus 74 ~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS 132 (173)
... ..+-||+ |.+| ..+...+.+..+.+.+|+. . ..-+|.|+++
T Consensus 449 r~r-NHPSIi~----Wslg-NE~~~g~~~~~l~~~ik~~----D-----ptRpV~~~~~ 492 (1010)
T 3bga_A 449 RSK-NHPAIVI----WSQG-NEAGNGINFERTYDWLKSV----E-----KGRPVQYERA 492 (1010)
T ss_dssp HHT-TCTTEEE----EECC-SSSCCSHHHHHHHHHHHHH----C-----SSSCEECGGG
T ss_pred HhC-CCCEEEE----EECc-cCcCcHHHHHHHHHHHHHH----C-----CCCcEEeCCC
Confidence 433 3344554 6776 3332334566666666654 2 2346777764
No 236
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=43.68 E-value=1.7e+02 Score=28.45 Aligned_cols=105 Identities=13% Similarity=0.180 Sum_probs=62.5
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCC-C---------HHHHhcCChHHHHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGE-T---------LEQRESGSTVAVVAEQTKAI 71 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE-~---------~~~r~~~~~~~~l~~Ql~~~ 71 (173)
+++|++|++.|=+-|-. +++.. ...|-+.||..+..+.- + ..........+...+++...
T Consensus 356 ~lmK~~G~N~VR~~hyp------~~~~f----ydlcDe~Gi~V~~E~~~~~~g~~~~~w~~~~~~~p~~~~~~~~~~~~m 425 (1024)
T 1yq2_A 356 ALMKRFNVNAIRTSHYP------PHPRL----LDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERT 425 (1024)
T ss_dssp HHHHHTTCCEEEETTSC------CCHHH----HHHHHHHTCEEEEECSCBCGGGTTTTTTTCGGGCGGGHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEecCCC------CCHHH----HHHHHHCCCEEEEcCCcccCCcccccccccCCCCHHHHHHHHHHHHHH
Confidence 46899999999887744 33444 68999999999976521 0 00011224455666777776
Q ss_pred HhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcC
Q 039862 72 AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGG 131 (173)
Q Consensus 72 l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGG 131 (173)
+.... ..+-||+ |.+|. .+...+.++.+.+.+|+. ...-++.|++
T Consensus 426 V~r~r-NHPSIi~----WslgN-E~~~g~~~~~l~~~ik~~---------DptRpv~~~~ 470 (1024)
T 1yq2_A 426 VERDK-NHPSIVM----WSLGN-ESGTGSNLAAMAAWAHAR---------DSSRPVHYEG 470 (1024)
T ss_dssp HHHHT-TCTTEEE----EECCS-SCCCCHHHHHHHHHHHHH---------CTTSCEECTT
T ss_pred HHHcC-CCCeEEE----EECCc-CcchHHHHHHHHHHHHHh---------CCCceEEeCC
Confidence 66433 3344453 77773 332334566666666654 2245677776
No 237
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=43.63 E-value=36 Score=27.88 Aligned_cols=53 Identities=21% Similarity=0.250 Sum_probs=0.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEc-CCCCcccHHHHhc---CCCCCEEEe
Q 039862 92 GTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYG-GSVNGANCKELAA---QPDVDGFLV 152 (173)
Q Consensus 92 GtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYG-GSV~~~n~~~~~~---~~~vDG~Li 152 (173)
|-+-+.|.++-.++++...+.. +..+||+-| |+-+...+.++.. ..++||+|+
T Consensus 52 GE~~~Ls~~Er~~v~~~~~~~~--------~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 108 (297)
T 3flu_A 52 GESATLSVEEHTAVIEAVVKHV--------AKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS 108 (297)
T ss_dssp TTGGGSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCcccCCHHHHHHHHHHHHHHh--------CCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
No 238
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=43.59 E-value=1.2e+02 Score=24.15 Aligned_cols=48 Identities=17% Similarity=0.078 Sum_probs=31.5
Q ss_pred chh-hcCCCEEEEcccccc-ccc-CCC-HHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 3 MLV-NLSIPWVILGHSERR-ALL-NES-NDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 3 mLk-d~G~~~viiGHSERR-~~~-~E~-~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
.|+ +.|++.|=+-|.-.. .++ ++. -+.+.+=+..|.++||.+|+-+-.
T Consensus 51 ~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~ 102 (303)
T 7a3h_A 51 WLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHI 102 (303)
T ss_dssp HHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 355 789999877665311 111 222 234555589999999999998854
No 239
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=43.15 E-value=1.1e+02 Score=23.58 Aligned_cols=106 Identities=11% Similarity=0.088 Sum_probs=52.1
Q ss_pred cchhhcCCCEEEEcccc-cccccCCCH--------HHHHHHHHHHHHCCCeEEEEe-CCC----HH-HHhcCChHHHHHH
Q 039862 2 EMLVNLSIPWVILGHSE-RRALLNESN--------DFVGDKVAYALSRGLKVIACV-GET----LE-QRESGSTVAVVAE 66 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSE-RR~~~~E~~--------~~i~~Kv~~al~~gl~pIlCv-GE~----~~-~r~~~~~~~~l~~ 66 (173)
++|++.|++.+. .|+- ....+.-.| +.+.+-++.|.+.|...|.++ .-. .. ........+.+.+
T Consensus 54 ~~l~~~gl~i~~-~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (294)
T 3vni_A 54 ACAHGNGITLTV-GHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVE 132 (294)
T ss_dssp HHHHHTTCEEEE-EECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHH
T ss_pred HHHHHcCCeEEE-eecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHH
Confidence 357778887665 2431 111222222 345556888888999888753 110 00 0000012233333
Q ss_pred HHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 67 QTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 67 Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
.++.+..... ...+.+++||..--.+....+++++.++++.+
T Consensus 133 ~l~~l~~~a~-~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 174 (294)
T 3vni_A 133 SVREVAKVAE-ACGVDFCLEVLNRFENYLINTAQEGVDFVKQV 174 (294)
T ss_dssp HHHHHHHHHH-HTTCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCEEEEEecCcccCcccCCHHHHHHHHHHc
Confidence 3444332111 23578999997322233345677766655554
No 240
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=42.76 E-value=32 Score=27.20 Aligned_cols=52 Identities=12% Similarity=0.168 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCC-CCHHH-HHHHHHHHHHHHHh
Q 039862 61 VAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKV-ATPAQ-AQEVHAELRKWLKD 115 (173)
Q Consensus 61 ~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~-a~~e~-i~~~~~~Ir~~~~~ 115 (173)
.+.|..=...+|......+---||+ | +||||.- .+++. ++-+.+.|++++.+
T Consensus 129 ~~~L~~~y~~~L~~A~~~~i~SIAf-P--~IstG~~g~P~~~aA~i~~~av~~fl~~ 182 (214)
T 3q6z_A 129 VYLLRRAVQLSLCLAEKYKYRSIAI-P--AISSGVFGFPLGRCVETIVSAIKENFQF 182 (214)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEE-C--cccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3455555566665332233335677 7 7888875 33444 46678899998754
No 241
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=42.48 E-value=63 Score=25.71 Aligned_cols=103 Identities=11% Similarity=0.050 Sum_probs=50.4
Q ss_pred chhhcCCCEEEEccc--cc-ccccCCCHH--------HHHHHHHHHHHCCCeEEEE-eCC-CHHHH----hcCChHHHHH
Q 039862 3 MLVNLSIPWVILGHS--ER-RALLNESND--------FVGDKVAYALSRGLKVIAC-VGE-TLEQR----ESGSTVAVVA 65 (173)
Q Consensus 3 mLkd~G~~~viiGHS--ER-R~~~~E~~~--------~i~~Kv~~al~~gl~pIlC-vGE-~~~~r----~~~~~~~~l~ 65 (173)
+|++.|++.+-+.+. .. ...+.-.|+ .+.+-++.|.+.|...|++ .|- +.... ......+.+.
T Consensus 78 ~l~~~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~ 157 (316)
T 3qxb_A 78 AFRKAGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIAR 157 (316)
T ss_dssp HHHHTTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEeeccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHH
Confidence 567778776544222 21 112222222 3455678888999988875 332 11100 0001122333
Q ss_pred HHHHHHHhccCCCCCeE-EEEcc--cccccCCCCCCHHHHHHHHHHH
Q 039862 66 EQTKAIAEKISNWDNVV-LAYEP--VWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 66 ~Ql~~~l~~v~~~~~ii-IAYEP--vwAIGtG~~a~~e~i~~~~~~I 109 (173)
+.|..+..... ...+. |++|| .+ .....+++++.++++.+
T Consensus 158 ~~l~~l~~~a~-~~Gv~~l~lE~~~~~---~~~~~t~~~~~~l~~~v 200 (316)
T 3qxb_A 158 DMWIELAAYAK-RQGLSMLYVEPVPLA---TEFPSSAADAARLMADL 200 (316)
T ss_dssp HHHHHHHHHHH-HHTCCEEEECCCSCT---TBSSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCeEEEEEecCCc---cccCCCHHHHHHHHHHH
Confidence 33433332111 12467 99999 43 22335677776666655
No 242
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=42.29 E-value=25 Score=26.16 Aligned_cols=30 Identities=27% Similarity=0.454 Sum_probs=25.4
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHHHHhc
Q 039862 87 PVWAIGTGKVATPAQAQEVHAELRKWLKDN 116 (173)
Q Consensus 87 PvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~ 116 (173)
|+|.-+.....++++.+++.+.||+.+.+.
T Consensus 107 ~vw~~~~~~~~~~eel~~~a~kIr~~L~~~ 136 (149)
T 3i24_A 107 PVWGNTTGVIRAQSSQTQLVDLLRDKLSNI 136 (149)
T ss_dssp CSTTCSCCCBCCHHHHHHHHHHHHHHHTTS
T ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 788766677789999999999999998654
No 243
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=42.13 E-value=33 Score=28.83 Aligned_cols=27 Identities=15% Similarity=0.352 Sum_probs=21.1
Q ss_pred CCCCCEEEe------------ecccCChH-HHHHHHHHhh
Q 039862 144 QPDVDGFLV------------GGASLKPE-FIDIIKSATV 170 (173)
Q Consensus 144 ~~~vDG~Li------------G~asl~~~-f~~Ii~~~~~ 170 (173)
-.|.||++| |..||+++ |..+++.+..
T Consensus 251 AlGAdGl~IE~H~tpd~al~D~~~sl~p~el~~lv~~ir~ 290 (298)
T 3fs2_A 251 AVGVAGFFIETHEDPDNAPSDGPNMVPIDKMPALLEKLMA 290 (298)
T ss_dssp HHCCSEEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHHHH
T ss_pred HcCCCEEEEEecCChhccCCchhhcCCHHHHHHHHHHHHH
Confidence 468899999 67888876 9888877654
No 244
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=41.92 E-value=20 Score=31.63 Aligned_cols=45 Identities=13% Similarity=0.113 Sum_probs=33.1
Q ss_pred CcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC--ChH-HHHHHHHH
Q 039862 123 ASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL--KPE-FIDIIKSA 168 (173)
Q Consensus 123 ~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl--~~~-f~~Ii~~~ 168 (173)
.++||+--|+|. ++.+.+.+. .+.|+|.||++-+ .|. |.+|.+..
T Consensus 372 ~~iPVIg~GGI~s~~DA~e~l~-aGAd~Vqigrall~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 372 KQIPIIASGGIFSGLDALEKIE-AGASVCQLYSCLVFNGMKSAVQIKREL 420 (443)
T ss_dssp TCSCEEEESSCCSHHHHHHHHH-TTEEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred CCCcEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHHhcChHHHHHHHHHH
Confidence 369999877765 555777776 7899999999976 365 66666554
No 245
>1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A*
Probab=41.78 E-value=27 Score=30.40 Aligned_cols=69 Identities=19% Similarity=0.267 Sum_probs=48.4
Q ss_pred cccCCCCC--------CHHHHHHHHHHHHHHHHhccchhhc--CcceEE---EcCCCCcccHHHHhcC----CCCCEEEe
Q 039862 90 AIGTGKVA--------TPAQAQEVHAELRKWLKDNVSAEVA--ASTRII---YGGSVNGANCKELAAQ----PDVDGFLV 152 (173)
Q Consensus 90 AIGtG~~a--------~~e~i~~~~~~Ir~~~~~~~~~~~~--~~i~il---YGGSV~~~n~~~~~~~----~~vDG~Li 152 (173)
-+|||-+. +.+.++++..+++.++.. |..-.. +..-|. |||-.-|.=+..+... .++.|++|
T Consensus 96 PvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~-~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~I 174 (421)
T 1cpy_A 96 PVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQ-FPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLI 174 (421)
T ss_dssp STTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHH-CTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEE
T ss_pred CCcccccCCCCCCCCChHHHHHHHHHHHHHHHHh-CHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEe
Confidence 46888652 235678899999999865 443322 333333 7888888777777764 57899999
Q ss_pred ecccCCh
Q 039862 153 GGASLKP 159 (173)
Q Consensus 153 G~asl~~ 159 (173)
|...+++
T Consensus 175 GNg~~dp 181 (421)
T 1cpy_A 175 GNGLTDP 181 (421)
T ss_dssp ESCCCCH
T ss_pred cCcccCh
Confidence 9998885
No 246
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=41.41 E-value=1.7e+02 Score=25.09 Aligned_cols=48 Identities=23% Similarity=0.284 Sum_probs=32.8
Q ss_pred cchhhcCCCEEEEcccccc-----cccCCC-HHHHHHHHHHHHHCCCeEEEEeC
Q 039862 2 EMLVNLSIPWVILGHSERR-----ALLNES-NDFVGDKVAYALSRGLKVIACVG 49 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR-----~~~~E~-~~~i~~Kv~~al~~gl~pIlCvG 49 (173)
+.|+++|++.|=+.++=.+ -.++++ -+.+.+-+..|.++||.+||++-
T Consensus 73 ~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~Gi~vildlH 126 (481)
T 2osx_A 73 REYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERGYKVMLDMH 126 (481)
T ss_dssp HHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 4689999999988764111 112221 23455678999999999999953
No 247
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=40.60 E-value=28 Score=28.94 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=27.7
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+-.|+|. ++.+.+.+. .+.|+|+||++-+.
T Consensus 251 ~ipvia~GGI~~~~d~~k~l~-~GAd~V~iG~~~l~ 285 (349)
T 1p0k_A 251 ASTMIASGGLQDALDVAKAIA-LGASCTGMAGHFLK 285 (349)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHHH
Confidence 59999988886 666777666 59999999998765
No 248
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=40.49 E-value=18 Score=30.63 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=27.8
Q ss_pred CcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 123 ASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 123 ~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.++||+--|+|. ++++.+.+. .+.|+++||++-+.
T Consensus 279 ~~ipvia~GGI~~~~D~~k~l~-~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 279 GRIPVFLDGGVRRGTDVFKALA-LGAAGVFIGRPVVF 314 (370)
T ss_dssp TSSCEEEESSCCSHHHHHHHHH-HTCSEEEECHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHH-cCCCEEeecHHHHH
Confidence 368999977775 557888887 79999999997664
No 249
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=40.47 E-value=37 Score=28.18 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=44.3
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC-CCcccHHHH---hcCCCCCEEEeecccC-C--h----
Q 039862 93 TGKV--ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS-VNGANCKEL---AAQPDVDGFLVGGASL-K--P---- 159 (173)
Q Consensus 93 tG~~--a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS-V~~~n~~~~---~~~~~vDG~LiG~asl-~--~---- 159 (173)
||.. .|.++-.++++...+.. +..+||+-|-+ -+...+.++ +...++||+|+--=+. + +
T Consensus 66 TGE~~~Ls~~Er~~v~~~~v~~~--------~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~ 137 (315)
T 3si9_A 66 TGESPTLTHEEHKRIIELCVEQV--------AKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLY 137 (315)
T ss_dssp TTTGGGSCHHHHHHHHHHHHHHH--------TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHH
T ss_pred ccCccccCHHHHHHHHHHHHHHh--------CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHH
Confidence 4444 67777777777776654 34699999854 566666554 4478999999976332 2 1
Q ss_pred -HHHHHHHHH
Q 039862 160 -EFIDIIKSA 168 (173)
Q Consensus 160 -~f~~Ii~~~ 168 (173)
.|..|.+.+
T Consensus 138 ~~f~~va~a~ 147 (315)
T 3si9_A 138 THFSSIAKAI 147 (315)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHcC
Confidence 266666653
No 250
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=40.27 E-value=1.8e+02 Score=28.18 Aligned_cols=106 Identities=12% Similarity=0.151 Sum_probs=60.4
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC-------HHHHhcCChHHHHHHHHHHHHhc
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET-------LEQRESGSTVAVVAEQTKAIAEK 74 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~-------~~~r~~~~~~~~l~~Ql~~~l~~ 74 (173)
+++|++|++.+=+.|-. ++... +..|-+.||..+.-+.-. ..........+...+++...+..
T Consensus 377 ~lmK~~g~N~vR~~hyp------~~~~~----~dlcDe~Gi~V~~E~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~mV~r 446 (1023)
T 1jz7_A 377 LLMKQNNFNAVRCSHYP------NHPLW----YTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQR 446 (1023)
T ss_dssp HHHHHTTCCEEECTTSC------CCHHH----HHHHHHHTCEEEEECSCBCTTSSSTTTTTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEecCCC------CCHHH----HHHHHHCCCEEEECCCcccCCccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 46899999999776633 33333 689999999998754210 00011123455556666666654
Q ss_pred cCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC
Q 039862 75 ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS 132 (173)
Q Consensus 75 v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS 132 (173)
.. ..+-||. |.+|. .+...+...++.+.+|+. . ..=++.|++.
T Consensus 447 ~r-NHPSIi~----WslgN-E~~~~~~~~~l~~~ik~~----D-----ptRpv~~~~~ 489 (1023)
T 1jz7_A 447 DR-NHPSVII----WSLGN-ESGHGANHDALYRWIKSV----D-----PSRPVQYEGG 489 (1023)
T ss_dssp HT-TCTTEEE----EECCS-SCCCCHHHHHHHHHHHHH----C-----TTSCEECCTT
T ss_pred hC-CCCEEEE----EECcc-CCcchHHHHHHHHHHHHh----C-----CCCeEEecCC
Confidence 33 3344553 77763 332234556666666654 2 2346778764
No 251
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=39.39 E-value=2.4e+02 Score=26.47 Aligned_cols=96 Identities=13% Similarity=0.117 Sum_probs=54.7
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeC-CCHHH----HhcCChHHHHHHHHHHHHhccC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVG-ETLEQ----RESGSTVAVVAEQTKAIAEKIS 76 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvG-E~~~~----r~~~~~~~~l~~Ql~~~l~~v~ 76 (173)
+++|++|++.+=+-|- -+.+.. +..|-+.||..+.-+- +.... .......+...+++...+....
T Consensus 314 ~~~K~~G~N~iR~~h~------p~~~~~----~dlcDe~GilV~~E~~~~w~~~~~~~~~~~~~~~~~~~~~~~mv~r~r 383 (801)
T 3gm8_A 314 KLLKDMGCNAIRTSHN------PFSPAF----YNLCDTMGIMVLNEGLDGWNQPKAADDYGNYFDEWWQKDMTDFIKRDR 383 (801)
T ss_dssp HHHHHTTCCEEEETTS------CCCHHH----HHHHHHHTCEEEEECCSSSSSCSSTTSGGGTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCcEEEecCC------CCcHHH----HHHHHHCCCEEEECCchhhcCCCCcccccHHHHHHHHHHHHHHHHhcC
Confidence 4789999999988772 355555 7999999999986541 11000 0011234555566666665433
Q ss_pred CCCCeEEEEcccccccCCCC-CCHHHHHHHHHHHHHH
Q 039862 77 NWDNVVLAYEPVWAIGTGKV-ATPAQAQEVHAELRKW 112 (173)
Q Consensus 77 ~~~~iiIAYEPvwAIGtG~~-a~~e~i~~~~~~Ir~~ 112 (173)
..+-||. |.+|.-.. .+++..+++.+.+|+.
T Consensus 384 -NHPSIi~----Ws~gNE~~g~~~~~~~~l~~~~k~~ 415 (801)
T 3gm8_A 384 -NHPSIIM----WSIGNEVTGATPEIQHNLVSLFHQL 415 (801)
T ss_dssp -TCTTEEE----EEEEESCSSCCHHHHHHHHHHHHHH
T ss_pred -CCCeEEE----EECccCCCCcHHHHHHHHHHHHHHH
Confidence 2344443 66663221 1235556666665554
No 252
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=38.89 E-value=1.9e+02 Score=24.98 Aligned_cols=50 Identities=14% Similarity=0.080 Sum_probs=33.2
Q ss_pred cchhhcCCCEEEEc-ccccccc-----cCC--CHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILG-HSERRAL-----LNE--SNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiG-HSERR~~-----~~E--~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.++++|++.|=+. +.++..+ .++ .-+.+.+=+..|.++||.+||.+...
T Consensus 46 ~~i~~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~ 103 (491)
T 2y8k_A 46 ARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGLYLVITIGNG 103 (491)
T ss_dssp GGGGGGTCCEEEEEEEECCTTTTSTTCCCTTTTHHHHHHHHHHHHHHTCEEEEEEECT
T ss_pred HHHHHcCCCEEEECceeecccccCCCccChhHHHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 46899999998553 1111111 122 12456677899999999999998753
No 253
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=38.33 E-value=1.9e+02 Score=24.65 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=32.9
Q ss_pred cchhhcCCCEEEEccc-ccc--------------cccC--------C-CHHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 2 EMLVNLSIPWVILGHS-ERR--------------ALLN--------E-SNDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 2 ~mLkd~G~~~viiGHS-ERR--------------~~~~--------E-~~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
++++++|++.|=+.|. +.. -.|+ | .-+.+.+=+..|.++||.+||++..
T Consensus 50 ~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~ 122 (383)
T 3pzg_A 50 ESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVN 122 (383)
T ss_dssp HHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCB
T ss_pred HHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 4689999999977653 221 1111 1 1234556688899999999999864
No 254
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=37.51 E-value=39 Score=27.61 Aligned_cols=53 Identities=9% Similarity=0.178 Sum_probs=0.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEc-CCCCcccHHHHhc---CCCCCEEEe
Q 039862 92 GTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYG-GSVNGANCKELAA---QPDVDGFLV 152 (173)
Q Consensus 92 GtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYG-GSV~~~n~~~~~~---~~~vDG~Li 152 (173)
|-+-+.|.++-.++++...+.. +..+||+-| |+-+...+.++.+ ..++||+|+
T Consensus 47 GE~~~Lt~~Er~~v~~~~~~~~--------~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 103 (292)
T 3daq_A 47 AESPTLTTDEKELILKTVIDLV--------DKRVPVIAGTGTNDTEKSIQASIQAKALGADAIML 103 (292)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHh--------CCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEE
No 255
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=37.35 E-value=1.6e+02 Score=23.64 Aligned_cols=130 Identities=14% Similarity=0.036 Sum_probs=69.6
Q ss_pred cchhhcCCCEEEEcc----ccccccc--CCCHHHHHHHHHHHHHCCCeEEEEe-----CCCHHHHhcCChHHHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGH----SERRALL--NESNDFVGDKVAYALSRGLKVIACV-----GETLEQRESGSTVAVVAEQTKA 70 (173)
Q Consensus 2 ~mLkd~G~~~viiGH----SERR~~~--~E~~~~i~~Kv~~al~~gl~pIlCv-----GE~~~~r~~~~~~~~l~~Ql~~ 70 (173)
+.|+++|++.+.+|+ .|.+..+ +.+-+.+-+-++.+.+.|+.+-..+ ||+.++. .+-+.-
T Consensus 146 ~~L~~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~---------~~~~~~ 216 (348)
T 3iix_A 146 EKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDL---------VDDLLF 216 (348)
T ss_dssp HHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHH---------HHHHHH
T ss_pred HHHHHhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHH---------HHHHHH
Confidence 468899999998874 2322211 2377778888999999999643322 5655543 222221
Q ss_pred HHhccCCCCCeEEEEcccccccCC----CCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEc-CCCCcccHHHHhcCC
Q 039862 71 IAEKISNWDNVVLAYEPVWAIGTG----KVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYG-GSVNGANCKELAAQP 145 (173)
Q Consensus 71 ~l~~v~~~~~iiIAYEPvwAIGtG----~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYG-GSV~~~n~~~~~~~~ 145 (173)
+..+....--+..|-|.- ||. .++++++..++++..|-.+.. ..+++--+ +...++ ..+.+-..
T Consensus 217 -l~~l~~~~i~i~~~~p~~--gt~l~~~~~~~~~e~~~~~a~~R~~lp~-------~~i~~~~~~~~~~~~-~~~~~l~~ 285 (348)
T 3iix_A 217 -LKEHDFDMVGIGPFIPHP--DTPLANEKKGDFTLTLKMVALTRILLPD-------SNIPATTAMGTIVPG-GREITLRC 285 (348)
T ss_dssp -HHHHTCSEECCEECCCCT--TSTTTTSCCCCHHHHHHHHHHHHHHSTT-------SBCBCCHHHHHHSTT-HHHHHHTT
T ss_pred -HHhcCCCEEeeeeeecCC--CCCcccCCCCCHHHHHHHHHHHHHHCCC-------CCchhcchhhhcCHH-HHHHHHhc
Confidence 222111110123344532 332 236788888888888876532 12432101 123333 34445556
Q ss_pred CCCEEE
Q 039862 146 DVDGFL 151 (173)
Q Consensus 146 ~vDG~L 151 (173)
|+|.++
T Consensus 286 Gan~i~ 291 (348)
T 3iix_A 286 GANVIM 291 (348)
T ss_dssp TCCEEC
T ss_pred CCcEEe
Confidence 888876
No 256
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=36.87 E-value=28 Score=25.25 Aligned_cols=38 Identities=5% Similarity=-0.023 Sum_probs=27.3
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCH
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETL 52 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~ 52 (173)
+.|++.||+.||+|.--.+ ...+|+.|++++.+.+.+.
T Consensus 73 ~~L~~~gv~~VI~g~iG~~-------------a~~~L~~GI~v~~~~~~~v 110 (136)
T 2re2_A 73 KSALDHGANALVLSEIGSP-------------GFNFIKNKMDVYIVPEMPV 110 (136)
T ss_dssp HHHHHTTCSEEEESCCBHH-------------HHHHHTTTSEEEECCSCBH
T ss_pred HHHHHcCCCEEEECCCCHh-------------HHHHHHCCCEEEEcCCCCH
Confidence 5688889999999975443 3455555999998866553
No 257
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=36.73 E-value=35 Score=28.13 Aligned_cols=51 Identities=20% Similarity=0.233 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcC-CCCcccHHHHh---cCCCCCEEEeec
Q 039862 96 VATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGG-SVNGANCKELA---AQPDVDGFLVGG 154 (173)
Q Consensus 96 ~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGG-SV~~~n~~~~~---~~~~vDG~LiG~ 154 (173)
+.|.++-.++++...+.. +..+||+-|- +-+...+.++. ...++||+|+--
T Consensus 63 ~Ls~~Er~~v~~~~~~~~--------~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 63 FLTSSERLEVVSRVRQAM--------PKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp GSCHHHHHHHHHHHHHTS--------CTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred hCCHHHHHHHHHHHHHHc--------CCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 366777667766665542 3568999874 45666665543 468999999954
No 258
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=36.38 E-value=26 Score=30.15 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=26.5
Q ss_pred CcceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC
Q 039862 123 ASTRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 123 ~~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~ 158 (173)
.++||+--|+|.... +.+.+. .+.|++.||++.+.
T Consensus 306 ~~ipVia~GGI~~g~Dv~kala-lGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 306 GKVEVFLDGGVRKGTDVLKALA-LGAKAVFVGRPIVW 341 (392)
T ss_dssp TSSEEEECSSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHH-hCCCeeEECHHHHH
Confidence 369999977776554 566665 79999999997664
No 259
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=36.34 E-value=18 Score=29.28 Aligned_cols=122 Identities=18% Similarity=0.183 Sum_probs=68.3
Q ss_pred cchhhcCCCEEEEc--ccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 2 EMLVNLSIPWVILG--HSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiG--HSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
+.+...|++++++. |+= ...+.+..-+..+...|..+++=|-... . .++..++.. ...
T Consensus 33 e~a~~~GaD~v~lDlE~~~------~~~~~~~~~~~a~~~~~~~~~VRv~~~~--------~----~~i~~~l~~--g~~ 92 (267)
T 2vws_A 33 EIAATSGYDWLLIDGEHAP------NTIQDLYHQLQAVAPYASQPVIRPVEGS--------K----PLIKQVLDI--GAQ 92 (267)
T ss_dssp HHHHTTCCSEEEEETTTSC------CCHHHHHHHHHHHTTSSSEEEEECSSCC--------H----HHHHHHHHT--TCC
T ss_pred HHHHhCCCCEEEEcCCCCC------CCHHHHHHHHHHHHhCCCcEEEEeCCCC--------H----HHHHHHHHh--CCC
Confidence 34667899999997 441 2234555545555446788888886431 1 345555542 122
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHH------------HHhccc------hhhcCcceEEEcCCC----Cccc
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW------------LKDNVS------AEVAASTRIIYGGSV----NGAN 137 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~------------~~~~~~------~~~~~~i~ilYGGSV----~~~n 137 (173)
.+++ | ++-++++++.+.+.++.- -...|| .....+++ -+--| --.|
T Consensus 93 ~I~~---P-------~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~--v~~~IEt~~av~~ 160 (267)
T 2vws_A 93 TLLI---P-------MVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLC--LLVQVESKTALDN 160 (267)
T ss_dssp EEEE---C-------CCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCE--EEEECCSHHHHHT
T ss_pred EEEe---C-------CCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccE--EEEEECCHHHHHH
Confidence 2333 3 456788888777665421 001111 00011122 22222 2358
Q ss_pred HHHHhcCCCCCEEEeecc
Q 039862 138 CKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 138 ~~~~~~~~~vDG~LiG~a 155 (173)
+.+|+..+++||++||..
T Consensus 161 ~~eIa~~~gvd~l~iG~~ 178 (267)
T 2vws_A 161 LDEILDVEGIDGVFIGPA 178 (267)
T ss_dssp HHHHHTSTTCCEEEECHH
T ss_pred HHHHhCCCCCCEEEEChH
Confidence 899999999999999975
No 260
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=36.18 E-value=36 Score=25.29 Aligned_cols=29 Identities=21% Similarity=0.390 Sum_probs=24.0
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHHHH
Q 039862 86 EPVWAIGTGKVATPAQAQEVHAELRKWLK 114 (173)
Q Consensus 86 EPvwAIGtG~~a~~e~i~~~~~~Ir~~~~ 114 (173)
.|+|.-+.....++++.+++.+.||+.+.
T Consensus 111 ~pvw~~~~~~~~~~eel~~~a~~Ir~~L~ 139 (149)
T 3i4s_A 111 RPVWGVMQPLAHDATEVQNFISALRRKIW 139 (149)
T ss_dssp SCCTTTSCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ccccCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 57887666677899999999999998864
No 261
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=36.10 E-value=36 Score=31.30 Aligned_cols=48 Identities=17% Similarity=-0.031 Sum_probs=36.2
Q ss_pred cchhhcCCCEEEE-----cccccccccCCC-HHHHHHHHHHHHHCCCeEEEEeC
Q 039862 2 EMLVNLSIPWVIL-----GHSERRALLNES-NDFVGDKVAYALSRGLKVIACVG 49 (173)
Q Consensus 2 ~mLkd~G~~~vii-----GHSERR~~~~E~-~~~i~~Kv~~al~~gl~pIlCvG 49 (173)
+++|++|++.|-+ .|--++--|.-+ +..+.+=++.|.++||..|++.|
T Consensus 39 ~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpG 92 (595)
T 4e8d_A 39 YNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPS 92 (595)
T ss_dssp HHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecC
Confidence 4789999999999 787666545433 23355558999999999999833
No 262
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=35.99 E-value=18 Score=28.44 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=36.0
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecc
Q 039862 91 IGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 91 IGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~a 155 (173)
-|||++.+-+.+.. +. ....|++-.|+++|+|+.+.+...+.+|+=|.+.
T Consensus 133 GGtG~~fdw~~l~~-------~~--------~~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSG 182 (205)
T 1nsj_A 133 GGSGKTFDWSLILP-------YR--------DRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSG 182 (205)
T ss_dssp SSCCSCCCGGGTGG-------GG--------GGSSCEEEESSCCTTTHHHHHHHHCCSEEEESGG
T ss_pred CCCCCccCHHHHHh-------hh--------cCCCcEEEECCCCHHHHHHHHHhcCCCEEEECCc
Confidence 57999988754422 00 0146899999999999988877667788877653
No 263
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=35.62 E-value=28 Score=28.63 Aligned_cols=68 Identities=21% Similarity=0.146 Sum_probs=44.2
Q ss_pred CCC--CCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcC-CCCcccHHHHh---cCCCCCEEEeecccC-C--h----
Q 039862 93 TGK--VATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGG-SVNGANCKELA---AQPDVDGFLVGGASL-K--P---- 159 (173)
Q Consensus 93 tG~--~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGG-SV~~~n~~~~~---~~~~vDG~LiG~asl-~--~---- 159 (173)
||. +.|.++-.++++...+.. +..+||+-|- +-+...+.++. ...++||+|+--=+. + +
T Consensus 48 tGE~~~Ls~~Er~~v~~~~~~~~--------~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~ 119 (300)
T 3eb2_A 48 TGEFAYLGTAQREAVVRATIEAA--------QRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIE 119 (300)
T ss_dssp GGTGGGCCHHHHHHHHHHHHHHH--------TTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHH
T ss_pred ccCccccCHHHHHHHHHHHHHHh--------CCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHH
Confidence 454 367777777777776654 4568999874 45666665544 467899999976333 2 1
Q ss_pred -HHHHHHHHH
Q 039862 160 -EFIDIIKSA 168 (173)
Q Consensus 160 -~f~~Ii~~~ 168 (173)
.|..|.+.+
T Consensus 120 ~~f~~va~a~ 129 (300)
T 3eb2_A 120 SYFRAIADAV 129 (300)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHC
Confidence 266666653
No 264
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=35.50 E-value=25 Score=30.78 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=46.3
Q ss_pred ccCCCCC--------C-HHHHHHHHHHHHHHHHhccchhhcCcceEE---EcCCCCcccHHHHhcC--CCCCEEEeeccc
Q 039862 91 IGTGKVA--------T-PAQAQEVHAELRKWLKDNVSAEVAASTRII---YGGSVNGANCKELAAQ--PDVDGFLVGGAS 156 (173)
Q Consensus 91 IGtG~~a--------~-~e~i~~~~~~Ir~~~~~~~~~~~~~~i~il---YGGSV~~~n~~~~~~~--~~vDG~LiG~as 156 (173)
+|||-+. + .+.+.+...++++++.. |.+.....+-|. |||-.-|.=+..+... .++.|++||+..
T Consensus 102 ~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~-~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~ 180 (452)
T 1ivy_A 102 AGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRL-FPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp TTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHH-SGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHh-cHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCc
Confidence 5888752 1 24556788999999876 322223334333 7777777777777653 578999999999
Q ss_pred CChH
Q 039862 157 LKPE 160 (173)
Q Consensus 157 l~~~ 160 (173)
+++.
T Consensus 181 ~d~~ 184 (452)
T 1ivy_A 181 SSYE 184 (452)
T ss_dssp SBHH
T ss_pred cChh
Confidence 8853
No 265
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=34.96 E-value=40 Score=29.22 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=26.0
Q ss_pred cceEEEcCCCCccc-HHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl 157 (173)
++||+..|+|.... +.+.+. .+.|++.+|++-+
T Consensus 336 ~ipvia~GGi~~~~di~kal~-~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 336 GKTIIADGGIKYSGDIVKALA-AGGNAVMLGSMFA 369 (491)
T ss_dssp TCEEEEESCCCSHHHHHHHHH-TTCSEEEESTTTT
T ss_pred CCCEEeeCCCCCHHHHHHHHH-cCCcceeeCHHhh
Confidence 59999988876555 555554 6999999999876
No 266
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=34.87 E-value=27 Score=29.70 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=26.2
Q ss_pred CcceEEEcCCCCccc-HHHHhcCCCCCEEEeecccCC
Q 039862 123 ASTRIIYGGSVNGAN-CKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 123 ~~i~ilYGGSV~~~n-~~~~~~~~~vDG~LiG~asl~ 158 (173)
.++||+--|+|.... +.+.+. .+.|+|+||++.+.
T Consensus 283 ~~ipVia~GGI~~g~D~~kala-lGAd~V~iGr~~l~ 318 (368)
T 2nli_A 283 KRVPIVFDSGVRRGEHVAKALA-SGADVVALGRPVLF 318 (368)
T ss_dssp TSSCEEECSSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHH
Confidence 358999877766554 566666 79999999997664
No 267
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=34.51 E-value=1.4e+02 Score=26.78 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=28.6
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+++|++|++.+=+.|- -+.+.. +..|-+.||..+.-+
T Consensus 318 ~l~k~~g~N~vR~~hy------p~~~~~----~~lcD~~Gi~V~~E~ 354 (605)
T 3lpf_A 318 ALMDWIGANSYRTSHY------PYAEEM----LDWADEHGIVVIDET 354 (605)
T ss_dssp HHHHHHTCCEEEECSS------CCCHHH----HHHHHHHTCEEEEEC
T ss_pred HHHHHCCCcEEEecCC------CCcHHH----HHHHHhcCCEEEEec
Confidence 4689999999987763 344444 789999999998765
No 268
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=34.13 E-value=56 Score=26.98 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHh---cCCCCCEEEeecccC-Ch-------HHHH
Q 039862 95 KVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELA---AQPDVDGFLVGGASL-KP-------EFID 163 (173)
Q Consensus 95 ~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~---~~~~vDG~LiG~asl-~~-------~f~~ 163 (173)
-+.|.++-.++++...+.. +..+||+.|=+-+...+.++. ...++||+|+--=+. ++ .|..
T Consensus 60 ~~Ls~eEr~~vi~~~~~~~--------~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 131 (314)
T 3d0c_A 60 YALTIEEAKQVATRVTELV--------NGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRN 131 (314)
T ss_dssp GGSCHHHHHHHHHHHHHHH--------TTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHh--------CCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 3477888778777777654 346899986333777765554 468999999976433 21 2666
Q ss_pred HHHHH
Q 039862 164 IIKSA 168 (173)
Q Consensus 164 Ii~~~ 168 (173)
|.+..
T Consensus 132 va~a~ 136 (314)
T 3d0c_A 132 IIEAL 136 (314)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 66543
No 269
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=33.83 E-value=37 Score=27.31 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=45.1
Q ss_pred cchhhcCCCEEEEccccccc-cc-----CCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhcc
Q 039862 2 EMLVNLSIPWVILGHSERRA-LL-----NESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI 75 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~-~~-----~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v 75 (173)
++|++.|++.+-+ |.--.. .+ .+..+.+.+-++.|.+.|...|+|-|-... ......+.+.+.|..+....
T Consensus 83 ~~l~~~GL~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~--~~~~~~~~~~~~l~~l~~~a 159 (305)
T 3obe_A 83 KMVDDAGLRISSS-HLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLPRI--ENEDDAKVVSEIFNRAGEIT 159 (305)
T ss_dssp HHHHHTTCEEEEE-BCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCCCC--SSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCeEEEe-eccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCC--CCHHHHHHHHHHHHHHHHHH
Confidence 3577788876655 432200 01 122345777788899999999998653311 00011222333333333211
Q ss_pred CCCCCeEEEEcccc
Q 039862 76 SNWDNVVLAYEPVW 89 (173)
Q Consensus 76 ~~~~~iiIAYEPvw 89 (173)
....+.++|||..
T Consensus 160 -~~~Gv~l~lEn~~ 172 (305)
T 3obe_A 160 -KKAGILWGYHNHS 172 (305)
T ss_dssp -HTTTCEEEEECCS
T ss_pred -HHcCCEEEEecCc
Confidence 1346889999975
No 270
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=33.54 E-value=87 Score=25.40 Aligned_cols=53 Identities=13% Similarity=0.077 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHH---hcCCCCCEEEeeccc
Q 039862 96 VATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKEL---AAQPDVDGFLVGGAS 156 (173)
Q Consensus 96 ~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~---~~~~~vDG~LiG~as 156 (173)
+.|.++-.++++...+.. +..+||+.|-+- +...+.++ +...++||+|+--=+
T Consensus 50 ~Ls~~Er~~v~~~~~~~~--------~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 106 (292)
T 2ojp_A 50 TLNHDEHADVVMMTLDLA--------DGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPY 106 (292)
T ss_dssp GSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCC
T ss_pred hCCHHHHHHHHHHHHHHh--------CCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 367887777777776654 346899987554 55666555 456799999997643
No 271
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=33.44 E-value=31 Score=23.84 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=27.0
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.|++.||+.|++|+- ++.- .....+.|+.++...+.+
T Consensus 56 ~~l~~~gv~~vi~~~i------G~~a------~~~L~~~GI~v~~~~~~~ 93 (116)
T 1rdu_A 56 QSLVSKGVEYLIASNV------GRNA------FETLKAAGVKVYRFEGGT 93 (116)
T ss_dssp HHHHTTTCCEEECSSC------CSSC------HHHHHTTTCEEECCCSCB
T ss_pred HHHHHcCCCEEEECCC------CHhH------HHHHHHCCCEEEECCCCC
Confidence 5688899999999974 3332 355667899999865444
No 272
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=33.22 E-value=2.4e+02 Score=25.12 Aligned_cols=36 Identities=17% Similarity=0.102 Sum_probs=26.3
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEE
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIAC 47 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlC 47 (173)
++||++|++.+=+-|- -..++. +..|-+.||.++.-
T Consensus 351 ~~~k~~G~N~vR~~h~------p~~~~~----~~~cD~~Gi~V~~e 386 (613)
T 3hn3_A 351 NLLRWLGANAFRTSHY------PYAEEV----MQMCDRYGIVVIDE 386 (613)
T ss_dssp HHHHHHTCCEEECTTS------CCCHHH----HHHHHHHTCEEEEE
T ss_pred HHHHHcCCCEEEccCC------CChHHH----HHHHHHCCCEEEEe
Confidence 4789999999977552 223333 78999999998853
No 273
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=33.17 E-value=1.9e+02 Score=23.14 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=31.1
Q ss_pred cchhhcCCCEEEEccccccc-------ccCC-CHHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 2 EMLVNLSIPWVILGHSERRA-------LLNE-SNDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~-------~~~E-~~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
+.|+++|++.|=+.=+-.+. .+++ .-+.+.+=+..|.++||.+|+.+--
T Consensus 35 ~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 35 ETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp HHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 35789999998664221111 1111 1234556689999999999998643
No 274
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=32.83 E-value=10 Score=20.19 Aligned_cols=7 Identities=57% Similarity=1.564 Sum_probs=5.6
Q ss_pred EEccccc
Q 039862 84 AYEPVWA 90 (173)
Q Consensus 84 AYEPvwA 90 (173)
-|||-|-
T Consensus 14 kyepfwe 20 (26)
T 1nrp_R 14 KYEPFWE 20 (26)
T ss_pred ccCcccc
Confidence 4999994
No 275
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=32.02 E-value=2.4e+02 Score=25.52 Aligned_cols=96 Identities=9% Similarity=0.061 Sum_probs=53.4
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeC-----CCHHH--HhcCChHHHHHHHHHHHHhc
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVG-----ETLEQ--RESGSTVAVVAEQTKAIAEK 74 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvG-----E~~~~--r~~~~~~~~l~~Ql~~~l~~ 74 (173)
++||++|++.+=+-|- -+++.. +..|-+.||..+.-+- .-... .......+...+++...+..
T Consensus 311 ~~~k~~G~N~vR~~h~------p~~~~~----~~~cD~~Gl~V~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r 380 (667)
T 3cmg_A 311 ALMREMGVNAIRLAHY------PQATYM----YDLMDKHGIVTWAEIPFVGPGGYADKGFVDQASFRENGKQQLIELIRQ 380 (667)
T ss_dssp HHHHHTTCCEEEETTS------CCCHHH----HHHHHHHTCEEEEECCCBCCTTSSSCSCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEecCC------CCCHHH----HHHHHHCCCEEEEcccccCcCccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4689999999988773 245554 6899999999886432 10000 00112334556666666654
Q ss_pred cCCCCCeEEEEcccccccCCC----CCCHHHHHHHHHHHHHH
Q 039862 75 ISNWDNVVLAYEPVWAIGTGK----VATPAQAQEVHAELRKW 112 (173)
Q Consensus 75 v~~~~~iiIAYEPvwAIGtG~----~a~~e~i~~~~~~Ir~~ 112 (173)
.. ..+-||+ |.+|.=. ....+.++++.+.+|+.
T Consensus 381 ~r-NHPSIi~----W~~gNE~~~~~~~~~~~~~~l~~~vk~~ 417 (667)
T 3cmg_A 381 HY-NHPSICF----WGLFNELKEVGDNPVEYVKELNALAKQE 417 (667)
T ss_dssp HT-TCTTEEE----EEEEESCCSSSSCCHHHHHHHHHHHHHH
T ss_pred cC-CCCEEEE----EecccCCCccchhHHHHHHHHHHHHHHH
Confidence 33 3344554 4454211 12345566666666654
No 276
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=31.88 E-value=45 Score=28.17 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=25.6
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeec
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~ 154 (173)
++||+.||..+++.+..+.. .++|++.||.
T Consensus 211 ~~pvi~ggi~t~e~a~~~~~-~Gad~i~vg~ 240 (393)
T 2qr6_A 211 DVPVIAGGVNDYTTALHMMR-TGAVGIIVGG 240 (393)
T ss_dssp SSCEEEECCCSHHHHHHHHT-TTCSEEEESC
T ss_pred CCCEEECCcCCHHHHHHHHH-cCCCEEEECC
Confidence 48999999999888777765 8999999976
No 277
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=31.49 E-value=57 Score=26.58 Aligned_cols=45 Identities=18% Similarity=0.088 Sum_probs=32.4
Q ss_pred cceEEEcCCCCc------ccHHHHhcCCCCCEEEeecccCCh--HHHHHHHHH
Q 039862 124 STRIIYGGSVNG------ANCKELAAQPDVDGFLVGGASLKP--EFIDIIKSA 168 (173)
Q Consensus 124 ~i~ilYGGSV~~------~n~~~~~~~~~vDG~LiG~asl~~--~f~~Ii~~~ 168 (173)
++|++.=+-.|| ++..+-+...|+||+++-...+.. +|.+.++..
T Consensus 95 ~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~ 147 (267)
T 3vnd_A 95 DMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAH 147 (267)
T ss_dssp TCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHT
T ss_pred CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHc
Confidence 467654344455 777788888999999998877752 377777664
No 278
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=31.36 E-value=32 Score=24.11 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=26.1
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
++|++.||+.||+|.- ++.- .....+.|+.++.+...+
T Consensus 59 ~~l~~~gv~~vi~~~i------G~~a------~~~L~~~GI~v~~~~~~~ 96 (124)
T 1eo1_A 59 QIIANNGVKAVIASSP------GPNA------FEVLNELGIKIYRATGTS 96 (124)
T ss_dssp HHHHHTTCCEEEECCS------SHHH------HHHHHHHTCEEEECCSCC
T ss_pred HHHHHCCCCEEEECCc------CHHH------HHHHHHCCCEEEEcCCCC
Confidence 5688899999999873 2221 345556799999865544
No 279
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=30.83 E-value=43 Score=30.64 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=26.5
Q ss_pred CcceEEEcCCCCcccHHHHhcCCCCCEEEeec
Q 039862 123 ASTRIIYGGSVNGANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 123 ~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~ 154 (173)
.+++|+-|.-++.+-+.+|+. .++|++.||=
T Consensus 321 p~~~viaGNVaT~e~a~~Li~-aGAD~vkVGi 351 (556)
T 4af0_A 321 PKIDVIAGNVVTREQAAQLIA-AGADGLRIGM 351 (556)
T ss_dssp TTSEEEEEEECSHHHHHHHHH-HTCSEEEECS
T ss_pred CcceEEeccccCHHHHHHHHH-cCCCEEeecC
Confidence 368999999999998888876 8999999953
No 280
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=30.61 E-value=79 Score=27.26 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=32.2
Q ss_pred cchhhcCCCEEEEc-cccccc----ccC---CCHHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVILG-HSERRA----LLN---ESNDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~viiG-HSERR~----~~~---E~~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+.|++.|+++|=+- +-+... .++ -+.+.+.+.+++|.++||++++-+
T Consensus 55 ~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldf 109 (399)
T 1ur4_A 55 KTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADF 109 (399)
T ss_dssp HHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 46899999999762 111110 111 235667788999999999999985
No 281
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.56 E-value=60 Score=29.74 Aligned_cols=48 Identities=19% Similarity=0.177 Sum_probs=36.5
Q ss_pred cchhhcCCCEEEEc-----ccccccccCCCH-HHHHHHHHHHHHCCCeEEEEeC
Q 039862 2 EMLVNLSIPWVILG-----HSERRALLNESN-DFVGDKVAYALSRGLKVIACVG 49 (173)
Q Consensus 2 ~mLkd~G~~~viiG-----HSERR~~~~E~~-~~i~~Kv~~al~~gl~pIlCvG 49 (173)
+++|++|++.|-++ |--++--|..+- +.+.+=++.|.++||.+|++.|
T Consensus 44 ~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 44 KMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp HHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 47899999999999 876665454432 2234447999999999999876
No 282
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=30.42 E-value=26 Score=28.05 Aligned_cols=123 Identities=20% Similarity=0.242 Sum_probs=65.9
Q ss_pred cchhhcCCCEEEEc--ccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 2 EMLVNLSIPWVILG--HSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiG--HSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
+.+...|++++++. |+ -...+..+.-+..+...|..+++=|-+... . . |..++.. . ..
T Consensus 34 e~a~~~gaD~v~lDlEd~------p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~-------~-~----i~~~l~~-g-~~ 93 (256)
T 1dxe_A 34 EVLGLAGFDWLVLDGEHA------PNDISTFIPQLMALKGSASAPVVRVPTNEP-------V-I----IKRLLDI-G-FY 93 (256)
T ss_dssp HHHTTSCCSEEEEESSSS------SCCHHHHHHHHHHTTTCSSEEEEECSSSCH-------H-H----HHHHHHT-T-CC
T ss_pred HHHHhCCCCEEEEcCCCC------CCCHHHHHHHHHHHHhCCCcEEEECCCCCH-------H-H----HHHHHhc-C-Cc
Confidence 34567899999987 44 233444444455544456777777765422 1 1 4444431 1 11
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHH---H--------Hhccc------hhhcCcceEEEcCCCC----cccH
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW---L--------KDNVS------AEVAASTRIIYGGSVN----GANC 138 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~---~--------~~~~~------~~~~~~i~ilYGGSV~----~~n~ 138 (173)
-+++ | ++-++++++.+.+.++.- . ...|| .....++++ +--|- -.|+
T Consensus 94 gI~~---P-------~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v--~~~IEt~~av~~~ 161 (256)
T 1dxe_A 94 NFLI---P-------FVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITI--LVQIESQQGVDNV 161 (256)
T ss_dssp EEEE---S-------CCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEE--EEEECSHHHHHTH
T ss_pred eeee---c-------CcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEE--EEEECCHHHHHhH
Confidence 2222 3 457889987776665420 0 00111 000112221 11111 2588
Q ss_pred HHHhcCCCCCEEEeeccc
Q 039862 139 KELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 139 ~~~~~~~~vDG~LiG~as 156 (173)
.+|+..+++||++||..-
T Consensus 162 ~eIa~~~~vd~l~iG~~D 179 (256)
T 1dxe_A 162 DAIAATEGVDGIFVGPSD 179 (256)
T ss_dssp HHHHTSTTCCEEEECHHH
T ss_pred HHHhCCCCCCEEEEChHH
Confidence 999998999999999753
No 283
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=30.33 E-value=1.7e+02 Score=21.91 Aligned_cols=70 Identities=21% Similarity=0.319 Sum_probs=44.7
Q ss_pred HCCCeEEEEeCCCHHHHhcCChHHHHHHHHH---HHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHh
Q 039862 39 SRGLKVIACVGETLEQRESGSTVAVVAEQTK---AIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKD 115 (173)
Q Consensus 39 ~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~---~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~ 115 (173)
++-+...++|-..+++ +...++.+-++ .....+. .+-|+-| | +|==+...++|+.+.++.+.+.+.|++
T Consensus 36 e~aLVvF~~VE~~De~----~~~~vv~~av~eI~~~a~kv~--~~~ivlY-P-yAHLSs~La~P~~A~~iL~~le~~L~~ 107 (143)
T 2hl0_A 36 EEVLVAFISVEKVDEK----NPEEVSLKAIEEISKVAEQVK--AENVFVY-P-FAHLSSELAKPSVAMDILNRVYQGLKE 107 (143)
T ss_dssp EEEEEEEEECBGGGGG----CHHHHHHHHHHHHHHHHHHHT--CCEEEEE-E-CGGGCSSBCCHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEEEEEccCCcC----CHHHHHHHHHHHHHHHHHhcC--CCEEEEe-c-cccccCccCChHHHHHHHHHHHHHHHh
Confidence 3445555666554432 22344444433 3334332 3445668 5 888888889999999999999999976
Q ss_pred c
Q 039862 116 N 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 108 ~ 108 (143)
T 2hl0_A 108 R 108 (143)
T ss_dssp T
T ss_pred C
Confidence 4
No 284
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=30.31 E-value=12 Score=20.11 Aligned_cols=7 Identities=57% Similarity=1.564 Sum_probs=5.6
Q ss_pred EEccccc
Q 039862 84 AYEPVWA 90 (173)
Q Consensus 84 AYEPvwA 90 (173)
-|||-|-
T Consensus 14 kyepfwe 20 (27)
T 1nro_R 14 KYEPFWE 20 (27)
T ss_pred ccCcccc
Confidence 5999993
No 285
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=30.30 E-value=28 Score=30.82 Aligned_cols=46 Identities=17% Similarity=0.265 Sum_probs=33.9
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeec
Q 039862 91 IGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 91 IGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~ 154 (173)
-|||++.+-+.+. . + ...|++-.|+++|+|+.+.+. .+..|+=|-+
T Consensus 383 GGtG~~fdW~~l~-------~-----~-----~~~p~iLAGGL~p~NV~~ai~-~~p~gvDvsS 428 (452)
T 1pii_A 383 GGSGQRFDWSLLN-------G-----Q-----SLGNVLLAGGLGADNCVEAAQ-TGCAGLDFNS 428 (452)
T ss_dssp CCSSCCCCGGGGT-------T-----S-----CCTTEEEESSCCTTTHHHHHT-TCCSEEEECG
T ss_pred CCCCCccCHHHhh-------c-----c-----cCCcEEEEcCCCHHHHHHHHh-cCCCEEEeCC
Confidence 5899998765331 1 0 146899999999999988877 6777877744
No 286
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=29.23 E-value=22 Score=29.24 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=69.3
Q ss_pred cchhhcCCCEEEEc--ccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 2 EMLVNLSIPWVILG--HSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 2 ~mLkd~G~~~viiG--HSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
+.+...|++++++. |+ -...+.+..-+..+...|..+++=|-+... .+|..++.. ...
T Consensus 54 e~a~~~GaD~v~lDlEh~------~~~~~~~~~~l~a~~~~~~~~~VRv~~~d~------------~di~~~ld~--ga~ 113 (287)
T 2v5j_A 54 ELLAGAGFDWLLIDGEHA------PNNVQTVLTQLQAIAPYPSQPVVRPSWNDP------------VQIKQLLDV--GTQ 113 (287)
T ss_dssp HHHHTSCCSEEEEESSSS------SCCHHHHHHHHHHHTTSSSEEEEECSSSCH------------HHHHHHHHT--TCC
T ss_pred HHHHhCCCCEEEEeCCCc------cchHHHHHHHHHHHHhcCCCEEEEECCCCH------------HHHHHHHhC--CCC
Confidence 35677899999997 55 123444544444444567889999876532 166666652 122
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHH------------hccch------hhcCcceEEEcCCCC----ccc
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK------------DNVSA------EVAASTRIIYGGSVN----GAN 137 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~------------~~~~~------~~~~~i~ilYGGSV~----~~n 137 (173)
.+++ | ++-++++++++.+.+|.-.. ..||. ....++++ +--|- -.|
T Consensus 114 ~Iml---P-------~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~v--i~mIEt~~av~n 181 (287)
T 2v5j_A 114 TLLV---P-------MVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCV--LVQIETREAMKN 181 (287)
T ss_dssp EEEE---S-------CCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEE--EEEECSHHHHHT
T ss_pred EEEe---C-------CCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEE--EEEECcHHHHHH
Confidence 2332 4 45678888877665542110 00000 00011221 11111 258
Q ss_pred HHHHhcCCCCCEEEeeccc
Q 039862 138 CKELAAQPDVDGFLVGGAS 156 (173)
Q Consensus 138 ~~~~~~~~~vDG~LiG~as 156 (173)
+.+|++.+++||++||..-
T Consensus 182 ~deIaa~~~vD~l~iG~~D 200 (287)
T 2v5j_A 182 LPQILDVEGVDGVFIGPAD 200 (287)
T ss_dssp HHHHHTSTTEEEEEECHHH
T ss_pred HHHHhCcCCCCEEEECHHH
Confidence 9999999999999999753
No 287
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=29.05 E-value=84 Score=25.47 Aligned_cols=54 Identities=20% Similarity=0.178 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHh---cCCCCCEEEeecccC
Q 039862 96 VATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELA---AQPDVDGFLVGGASL 157 (173)
Q Consensus 96 ~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~---~~~~vDG~LiG~asl 157 (173)
+.|.++-.++++...+.. +..+||+.|-+- +...+.++. ...++||+|+---+.
T Consensus 50 ~Ls~~Er~~v~~~~~~~~--------~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 50 TMTETERKETIKFVIDKV--------NKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp GSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred hCCHHHHHHHHHHHHHHh--------CCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 467887777777776653 346899987554 555555444 468999999976443
No 288
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.00 E-value=74 Score=26.30 Aligned_cols=65 Identities=17% Similarity=0.054 Sum_probs=43.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC-CCcccHHHH---hcCCCCCEEEeecccC-C--h-----HHHH
Q 039862 96 VATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS-VNGANCKEL---AAQPDVDGFLVGGASL-K--P-----EFID 163 (173)
Q Consensus 96 ~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS-V~~~n~~~~---~~~~~vDG~LiG~asl-~--~-----~f~~ 163 (173)
+.|.++-.++++...+.. +..+||+.|-+ -+...+.++ +...++||+|+--=.. + + .|..
T Consensus 73 ~Ls~~Er~~v~~~~v~~~--------~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 144 (315)
T 3na8_A 73 YLSDPEWDEVVDFTLKTV--------AHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRA 144 (315)
T ss_dssp GSCHHHHHHHHHHHHHHH--------TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHh--------CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 467787777777776654 34699999854 566666554 4468999999976432 2 1 2666
Q ss_pred HHHHH
Q 039862 164 IIKSA 168 (173)
Q Consensus 164 Ii~~~ 168 (173)
|.+.+
T Consensus 145 va~a~ 149 (315)
T 3na8_A 145 VGEAI 149 (315)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 66553
No 289
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=28.65 E-value=83 Score=25.42 Aligned_cols=28 Identities=21% Similarity=0.413 Sum_probs=21.2
Q ss_pred cCCCCCEEEe------------ecccCChH-HHHHHHHHhh
Q 039862 143 AQPDVDGFLV------------GGASLKPE-FIDIIKSATV 170 (173)
Q Consensus 143 ~~~~vDG~Li------------G~asl~~~-f~~Ii~~~~~ 170 (173)
...++||++| |..||+|+ |.++++.+.+
T Consensus 217 va~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 217 YAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp HHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHH
Confidence 3478899998 56788876 9888887654
No 290
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=28.08 E-value=1.1e+02 Score=23.24 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCC-CCHHHH-HHHHHHHHHHHHh
Q 039862 60 TVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKV-ATPAQA-QEVHAELRKWLKD 115 (173)
Q Consensus 60 ~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~-a~~e~i-~~~~~~Ir~~~~~ 115 (173)
..+.|..-...+|......+---||+ | +||||.- .+++++ +-+.+.+++++.+
T Consensus 93 ~~~~L~~~y~~~L~~a~~~~~~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~~l~~ 147 (184)
T 1spv_A 93 EDQLLQDAYLNSLRLVAANSYTSVAF-P--AISTGVYGYPRAAAAEIAVKTVSEFITR 147 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCceEEe-c--cccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34566666666665332222235788 7 7888886 445554 5578888988764
No 291
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=27.74 E-value=2.3e+02 Score=22.60 Aligned_cols=47 Identities=4% Similarity=0.101 Sum_probs=30.5
Q ss_pred cchhhcCCCEEEEccccccc-------ccC-CCHHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVILGHSERRA-------LLN-ESNDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~-------~~~-E~~~~i~~Kv~~al~~gl~pIlCv 48 (173)
+.|+++|++.|=+.=+-.+. .++ +.-+.+.+=+..|.++||.+||.+
T Consensus 43 ~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildl 97 (341)
T 1vjz_A 43 LWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISL 97 (341)
T ss_dssp HHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 35889999998664221110 111 123345566899999999999976
No 292
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=27.72 E-value=71 Score=26.92 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=26.0
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+--|+|. +..+.+.+. .+.|++.+|++-+
T Consensus 277 ~ipvia~GGI~~~~dv~kala-lGA~~V~iG~~~l 310 (393)
T 2qr6_A 277 YVHIIADGSIENSGDVVKAIA-CGADAVVLGSPLA 310 (393)
T ss_dssp CCEEEECSSCCSHHHHHHHHH-HTCSEEEECGGGG
T ss_pred ceEEEEECCCCCHHHHHHHHH-cCCCEEEECHHHH
Confidence 39999977775 666777666 6899999999854
No 293
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=27.63 E-value=60 Score=25.03 Aligned_cols=68 Identities=9% Similarity=-0.112 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHCCCeEEEEe-CCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHH
Q 039862 28 DFVGDKVAYALSRGLKVIACV-GETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVH 106 (173)
Q Consensus 28 ~~i~~Kv~~al~~gl~pIlCv-GE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~ 106 (173)
+.+.+-++.|.+.|...|++. |.... .. -.+++...+. ...+.++|||.+-- ...+++++.+++
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~~----~~----~l~~l~~~a~----~~Gv~l~lEn~~~~---~~~~~~~~~~ll 148 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLPE----QP----DLAALGRRLA----RHGLQLLVENDQTP---QGGRIEVLERFF 148 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCCS----SC----CHHHHHHHHT----TSSCEEEEECCSSH---HHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCc----HH----HHHHHHHHHH----hcCCEEEEecCCCC---CCCCHHHHHHHH
Confidence 345566777777777766553 32111 01 1122333332 23589999998521 113566666666
Q ss_pred HHHH
Q 039862 107 AELR 110 (173)
Q Consensus 107 ~~Ir 110 (173)
+.++
T Consensus 149 ~~v~ 152 (264)
T 1yx1_A 149 RLAE 152 (264)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 294
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=27.59 E-value=75 Score=26.08 Aligned_cols=55 Identities=25% Similarity=0.328 Sum_probs=37.8
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC-CCcccHHHHh---cCCCCCEEEeecc
Q 039862 93 TGKV--ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS-VNGANCKELA---AQPDVDGFLVGGA 155 (173)
Q Consensus 93 tG~~--a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS-V~~~n~~~~~---~~~~vDG~LiG~a 155 (173)
||.. .|.++-.++++...+.. +..+||+.|-+ -+...+.++. ...++||+|+--=
T Consensus 59 tGE~~~Lt~~Er~~v~~~~~~~~--------~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 59 TGESPTTTDGEKIELLRAVLEAV--------GDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp TTTGGGSCHHHHHHHHHHHHHHH--------TTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred ccchhhCCHHHHHHHHHHHHHHh--------CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 4544 67777777777776654 34699999854 5556655544 4678999999763
No 295
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=27.51 E-value=1.1e+02 Score=23.41 Aligned_cols=66 Identities=18% Similarity=0.212 Sum_probs=39.2
Q ss_pred EEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCC--CCHHHHHHHHHHHHHHHHh
Q 039862 44 VIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKV--ATPAQAQEVHAELRKWLKD 115 (173)
Q Consensus 44 pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~--a~~e~i~~~~~~Ir~~~~~ 115 (173)
.|=++|-.-. .....+.|..-...+|......+---||+ | +||||.- +..+-++-+.+.+++++.+
T Consensus 97 VIH~vgP~~~---~~~~~~~L~~~y~~~L~~a~~~~~~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~~l~~ 164 (193)
T 2xd7_A 97 VIHCHIPQWG---SDKCEEQLEETIKNCLSAAEDKKLKSVAF-P--PFPSGRNCFPKQTAAQVTLKAISAHFDD 164 (193)
T ss_dssp EEEEECCCTT---STTHHHHHHHHHHHHHHHHHHTTCSEEEE-C--CCCCSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcCC---CcchHHHHHHHHHHHHHHHHHcCCCEEEe-c--cccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4556664321 12445566666666665332233335777 7 7888875 4444556778999998865
No 296
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=27.31 E-value=58 Score=31.61 Aligned_cols=48 Identities=15% Similarity=0.007 Sum_probs=36.4
Q ss_pred cchhhcCCCEEEE-----cccccccccCCC-HHHHHHHHHHHHHCCCeEEEEeC
Q 039862 2 EMLVNLSIPWVIL-----GHSERRALLNES-NDFVGDKVAYALSRGLKVIACVG 49 (173)
Q Consensus 2 ~mLkd~G~~~vii-----GHSERR~~~~E~-~~~i~~Kv~~al~~gl~pIlCvG 49 (173)
+++|++|++.|-+ -|--++--|.-+ +..+.+=++.|.++||..|++.|
T Consensus 43 ~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 43 EKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPG 96 (971)
T ss_dssp HHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecC
Confidence 4789999999999 677666555433 12233448999999999999998
No 297
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=27.29 E-value=2.6e+02 Score=24.75 Aligned_cols=129 Identities=18% Similarity=0.274 Sum_probs=69.3
Q ss_pred HHHHHHHHCCCeEEE------EeCCCHHHHhcCChHHHHHHHHHHHHhccCC-CCCeEEEEcccccccCCC---------
Q 039862 32 DKVAYALSRGLKVIA------CVGETLEQRESGSTVAVVAEQTKAIAEKISN-WDNVVLAYEPVWAIGTGK--------- 95 (173)
Q Consensus 32 ~Kv~~al~~gl~pIl------CvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~-~~~iiIAYEPvwAIGtG~--------- 95 (173)
.-++.|+++|++.|- |.+|+. ..|.+++.++...+..--.. ....-.. ||..-|||-.
T Consensus 115 e~i~~aI~AGFtSVMiD~S~~p~eeNi-----~lt~evva~rtaeL~~~A~~~~~~~g~~-e~~yviGtEvpvpGGa~~~ 188 (450)
T 3txv_A 115 AMITAYAKAGFTKLHLDTSMGCAGEPT-----ALPDATTAARAARLAAVAEDAVGGRGGV-LPVYIIGTEVPIPGGALEE 188 (450)
T ss_dssp HHHHHHHTTTCCEEEECCCBCCSSSCS-----BCCHHHHHHHHHHHHHHHHHTC-------CCEEEEECC----------
T ss_pred HHHHHHHHcCCCEEEECCCCCchhhcc-----chhHHHHHHHHHHHHHHHHHHHhhcCCC-CceEEeeeecCCCCccccc
Confidence 447999999999985 665542 25677776665554431111 1111112 7888888822
Q ss_pred -----CCCHHHHHHHHHHHHHHHHhc-cc----h--hhcCcceEEEc----CCCCcccHHHHhcCC-CCCEEEe-ecc--
Q 039862 96 -----VATPAQAQEVHAELRKWLKDN-VS----A--EVAASTRIIYG----GSVNGANCKELAAQP-DVDGFLV-GGA-- 155 (173)
Q Consensus 96 -----~a~~e~i~~~~~~Ir~~~~~~-~~----~--~~~~~i~ilYG----GSV~~~n~~~~~~~~-~vDG~Li-G~a-- 155 (173)
.-+|+++.++++.-+..+... .+ . ...-++-+-.| +-.+.+.+++|.... ++.++.. |+.
T Consensus 189 ~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhghStD 268 (450)
T 3txv_A 189 LDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEAHSTD 268 (450)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEESCCT
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEecCCCC
Confidence 367899988887766665421 00 0 00112223344 234455667776654 5663444 554
Q ss_pred cCChH-HHHHHH
Q 039862 156 SLKPE-FIDIIK 166 (173)
Q Consensus 156 sl~~~-f~~Ii~ 166 (173)
.+.++ +.+.++
T Consensus 269 y~~~e~l~~~V~ 280 (450)
T 3txv_A 269 YQTPDALRELVA 280 (450)
T ss_dssp TCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 44444 666654
No 298
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=26.94 E-value=27 Score=30.03 Aligned_cols=32 Identities=22% Similarity=0.180 Sum_probs=24.1
Q ss_pred ccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCH
Q 039862 16 HSERRALLNESNDFVGDKVAYALSRGLKVIACVGETL 52 (173)
Q Consensus 16 HSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~ 52 (173)
|||+= |..+...+++.+|.+.|= .|+|||.|.
T Consensus 229 HsE~~----~V~~~ta~~in~aka~G~-RViAVGTTs 260 (346)
T 1yy3_A 229 HAEFY----QMSEETAAALNKVRENGG-RIISVGTTS 260 (346)
T ss_dssp CCEEE----EECHHHHHHHHHHHHTTC-CEEEECTTT
T ss_pred ccEEE----EECHHHHHHHHHHHHcCC-eEEEEecch
Confidence 67763 445566778899998885 589999985
No 299
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=26.88 E-value=37 Score=23.65 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=25.8
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.|++.||+.||+|.--. .- .....+.|+.++.....+
T Consensus 57 ~~L~~~gv~~vi~~~iG~------~a------~~~L~~~GI~v~~~~~~~ 94 (121)
T 2yx6_A 57 NFIKDHGAKIVLTYGIGR------RA------IEYFNSLGISVVTGVYGR 94 (121)
T ss_dssp HHHHHTTCCEEECSBCCH------HH------HHHHHHTTCEEECSBCSB
T ss_pred HHHHHcCCCEEEECCCCH------hH------HHHHHHCCCEEEECCCCC
Confidence 567888999999986322 21 355567899998765443
No 300
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=26.55 E-value=39 Score=28.06 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=26.1
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+--|+|. +..+.+.+. .+.|++.+|++.+
T Consensus 210 ~ipVIa~GGI~~g~Dv~kala-lGAdaV~iGr~~l 243 (336)
T 1ypf_A 210 SKPIIADGGIRTNGDVAKSIR-FGATMVMIGSLFA 243 (336)
T ss_dssp SSCEEEESCCCSTHHHHHHHH-TTCSEEEESGGGT
T ss_pred CCcEEEeCCCCCHHHHHHHHH-cCCCEEEeChhhh
Confidence 68999866665 556666666 6999999999988
No 301
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=26.32 E-value=44 Score=30.68 Aligned_cols=47 Identities=11% Similarity=0.111 Sum_probs=33.8
Q ss_pred cchhhcCCCEEEEcc-c----ccc-cccCCCHHHHHHHHHHHHHCCCeEEEEeCC
Q 039862 2 EMLVNLSIPWVILGH-S----ERR-ALLNESNDFVGDKVAYALSRGLKVIACVGE 50 (173)
Q Consensus 2 ~mLkd~G~~~viiGH-S----ERR-~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE 50 (173)
+++|++|++.|-+++ + |-. --|+ =+.+.+=+..|.++||.+|++.+-
T Consensus 30 ~~mk~~G~n~vr~~if~W~~~eP~~g~~~--f~~ld~~i~~~~~~Gi~vil~~~~ 82 (675)
T 3tty_A 30 RMFNLAGIDVATVNVFSWAKIQRDEVSYD--FTWLDDIIERLTKENIYLCLATST 82 (675)
T ss_dssp HHHHHHTCCEEEECSSCHHHHBSSSSCBC--CHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHcCCCEEEEeeechhhhCCcCCccC--HHHHHHHHHHHHHCCCEEEEeCCC
Confidence 478999999999987 3 221 1121 134555689999999999999863
No 302
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=26.25 E-value=40 Score=30.50 Aligned_cols=45 Identities=20% Similarity=0.325 Sum_probs=32.3
Q ss_pred cchhhcCCCEEEEcc-c----ccc-cccCCCHHHHHHHHHHHHHCCCeEEEEe
Q 039862 2 EMLVNLSIPWVILGH-S----ERR-ALLNESNDFVGDKVAYALSRGLKVIACV 48 (173)
Q Consensus 2 ~mLkd~G~~~viiGH-S----ERR-~~~~E~~~~i~~Kv~~al~~gl~pIlCv 48 (173)
++||++|++.|-++| + |-. -.|+. +.+.+=+..|.++||.+|++.
T Consensus 21 ~~mk~~G~N~vR~~if~W~~~eP~~g~~d~--~~ld~~ld~a~~~Gi~vil~~ 71 (645)
T 1kwg_A 21 RRMREAGLSHVRIGEFAWALLEPEPGRLEW--GWLDEAIATLAAEGLKVVLGT 71 (645)
T ss_dssp HHHHHHTCCEEEECTTCHHHHCSBTTBCCC--HHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHcCCCEEEEeeechhhcCCCCCccCh--HHHHHHHHHHHHCCCEEEEeC
Confidence 479999999999997 2 111 11221 234455899999999999998
No 303
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=26.14 E-value=66 Score=23.54 Aligned_cols=28 Identities=7% Similarity=0.074 Sum_probs=21.8
Q ss_pred EcccccccCCCCCCHHHHHHHHHHHHHHHHh
Q 039862 85 YEPVWAIGTGKVATPAQAQEVHAELRKWLKD 115 (173)
Q Consensus 85 YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~ 115 (173)
++|.|. ....++++.+++.+.||+.+.+
T Consensus 121 ~~~~w~---~~~~~~~~l~~~~~~lr~~l~~ 148 (149)
T 3ksv_A 121 LKIGWD---TVKVASDELAEDAKRYSEAIAK 148 (149)
T ss_dssp CCCCCC---CCCCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCC---CCCCCHHHHHHHHHHHHHHHhh
Confidence 567773 4457899999999999998753
No 304
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.11 E-value=2.2e+02 Score=22.78 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=57.5
Q ss_pred chhhcCCCEEEEc------cccc--ccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHH-HHhcCChHHHHHHHHHHHHh
Q 039862 3 MLVNLSIPWVILG------HSER--RALLNESNDFVGDKVAYALSRGLKVIACVGETLE-QRESGSTVAVVAEQTKAIAE 73 (173)
Q Consensus 3 mLkd~G~~~viiG------HSER--R~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~-~r~~~~~~~~l~~Ql~~~l~ 73 (173)
...+.|++.|.+- |.++ ++.+.|.-+.+.+=++.|.+.|+.+-..++-+.. +...-...+.+.+-++.+.+
T Consensus 87 ~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~ 166 (295)
T 1ydn_A 87 AAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFS 166 (295)
T ss_dssp HHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHh
Confidence 4567888887775 3332 2334444455555689999999998644433210 00011345555555554443
Q ss_pred ccCCCCCeEEEEcccccccCCCCCCHHHHHHHHHHHHHH
Q 039862 74 KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW 112 (173)
Q Consensus 74 ~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~ 112 (173)
. . ...+.|+ =..|. .+|+++.+.++.|++.
T Consensus 167 ~-G-~d~i~l~----Dt~G~---~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 167 L-G-CHEVSLG----DTIGR---GTPDTVAAMLDAVLAI 196 (295)
T ss_dssp H-T-CSEEEEE----ETTSC---CCHHHHHHHHHHHHTT
T ss_pred c-C-CCEEEec----CCCCC---cCHHHHHHHHHHHHHh
Confidence 1 1 2345554 23443 6799999999888765
No 305
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=25.73 E-value=51 Score=28.12 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=26.0
Q ss_pred CcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 123 ASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 123 ~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
.++||+--|+|. ...+.+.+. .|.|++.||++.+.
T Consensus 271 ~~ipVia~GGI~~g~Dv~kaLa-lGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 271 GKIEVYMDGGVRTGTDVLKALA-LGARCIFLGRPILW 306 (352)
T ss_dssp TSSEEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHH
Confidence 368999866665 455666666 69999999998763
No 306
>3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B*
Probab=25.70 E-value=52 Score=27.09 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=50.1
Q ss_pred cchhhcC-CCEEEEccccc----ccccCCCHHHHHHHHHH---HHHCCCeE----EEEeCCCHHHHhc-------CChHH
Q 039862 2 EMLVNLS-IPWVILGHSER----RALLNESNDFVGDKVAY---ALSRGLKV----IACVGETLEQRES-------GSTVA 62 (173)
Q Consensus 2 ~mLkd~G-~~~viiGHSER----R~~~~E~~~~i~~Kv~~---al~~gl~p----IlCvGE~~~~r~~-------~~~~~ 62 (173)
..|++-| ++|.+|||.+. ..+=+-+-+.+..++.. -++....| |.=+|=++-.... ++..-
T Consensus 95 ~~L~~~gkiRwqlVGHGr~e~n~~~fag~sadeLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL~s~~~~~q~tf~gkl~~ 174 (254)
T 3pa8_A 95 SIISDRPKIKLTFIGHGKDEFNTDIFAGFDVDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMFSYSINVEETYPGKLLL 174 (254)
T ss_dssp TTTTTCSEEEEEEECCCCSSCCSSEETTEEHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCCTTSCGGGSHHHHHHH
T ss_pred hHhccCCceEEEEEecCcCCCCcceeccCCHHHHHHHHHHHHHHHhhccCCCCceEEEEeecccCCCcchhhhhHHHHHH
Confidence 3454444 89999999874 22223455555554443 33444444 7788877754432 11223
Q ss_pred HHHHHHHHHHhccCCCCCeEEEEccccccc-CCC
Q 039862 63 VVAEQTKAIAEKISNWDNVVLAYEPVWAIG-TGK 95 (173)
Q Consensus 63 ~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIG-tG~ 95 (173)
.+..+......++....-.|-||+-.=+|- .|+
T Consensus 175 ~~~d~~~~~~~gi~~~~i~VsAr~~eV~Vn~~GR 208 (254)
T 3pa8_A 175 KVKDKISELMPSISQDSIIVSANQYEVRINSEGR 208 (254)
T ss_dssp HHHHHHHHHCTTSCGGGEEEEECSSCEEECTTSC
T ss_pred HHHHhhhhhcccccccceEEEEeeeeEEEcCCCc
Confidence 344444444555443333566777655554 344
No 307
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.50 E-value=69 Score=30.17 Aligned_cols=51 Identities=14% Similarity=0.137 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 98 TPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 98 ~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
..+.+.++++.+|+. | ...++|+.||-+- ....+.+...++|+++--+...
T Consensus 660 ~~~~~~~vi~~L~~~-----G---~~~i~VivGG~~p-~~d~~~l~~~GaD~~f~~gt~~ 710 (727)
T 1req_A 660 HLTLVPALRKELDKL-----G---RPDILITVGGVIP-EQDFDELRKDGAVEIYTPGTVI 710 (727)
T ss_dssp HHHHHHHHHHHHHHT-----T---CTTSEEEEEESCC-GGGHHHHHHTTEEEEECTTCCH
T ss_pred HHHHHHHHHHHHHhc-----C---CCCCEEEEcCCCc-cccHHHHHhCCCCEEEcCCccH
Confidence 455566666666653 2 2368999999444 4346677889999999855544
No 308
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=25.38 E-value=50 Score=28.72 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=26.6
Q ss_pred cceEEEcCCC-CcccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSV-NGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV-~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++||+--|+| ++..+.+.+. .|.|++.+|++-+
T Consensus 340 ~ipvia~GGI~~~~di~kala-~GAd~V~iGr~~l 373 (494)
T 1vrd_A 340 DVPIIADGGIRYSGDIVKALA-AGAESVMVGSIFA 373 (494)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHH-cCCCEEEECHHHh
Confidence 5999997777 6777777777 5899999998754
No 309
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=25.33 E-value=53 Score=23.69 Aligned_cols=27 Identities=19% Similarity=0.391 Sum_probs=21.6
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHH
Q 039862 86 EPVWAIGTGKVATPAQAQEVHAELRKW 112 (173)
Q Consensus 86 EPvwAIGtG~~a~~e~i~~~~~~Ir~~ 112 (173)
.|+|.-+.....++++.+++.+.||+.
T Consensus 108 ~~~~~~~~~~~~~~~el~~~a~~i~~~ 134 (135)
T 3nrd_A 108 GPVWGFGKAEPWPEEEHRTFAARIMEN 134 (135)
T ss_dssp SCSTTCSCCCCCCHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCCCHHHHHHHHHHHHhh
Confidence 477866666778999999999998864
No 310
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=25.06 E-value=1.9e+02 Score=20.77 Aligned_cols=56 Identities=9% Similarity=0.054 Sum_probs=37.5
Q ss_pred CCC-CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCChH
Q 039862 94 GKV-ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 94 G~~-a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
|.| ..++.+.++++.+++. +-.+.+.-=|...++.+.+++.. +|-+.|.=-+.+++
T Consensus 12 GEPll~~~~~~~l~~~~~~~---------g~~~~l~TNG~l~~~~~~~l~~~--~d~v~isld~~~~~ 68 (182)
T 3can_A 12 GEPLLHPEFLIDILKRCGQQ---------GIHRAVDTTLLARKETVDEVMRN--CELLLIDLKSMDST 68 (182)
T ss_dssp STGGGSHHHHHHHHHHHHHT---------TCCEEEECTTCCCHHHHHHHHHT--CSEEEEECCCSCHH
T ss_pred ccccCCHHHHHHHHHHHHHC---------CCcEEEECCCCCCHHHHHHHHhh--CCEEEEECCCCCHH
Confidence 776 4566667777777652 23566777899887888888754 78887744334333
No 311
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=24.92 E-value=31 Score=30.08 Aligned_cols=43 Identities=7% Similarity=-0.075 Sum_probs=32.4
Q ss_pred cceEEEcCCCCccc-HHHHhcC---CCCCEEEeecccC-ChH-HHHHHH
Q 039862 124 STRIIYGGSVNGAN-CKELAAQ---PDVDGFLVGGASL-KPE-FIDIIK 166 (173)
Q Consensus 124 ~i~ilYGGSV~~~n-~~~~~~~---~~vDG~LiG~asl-~~~-f~~Ii~ 166 (173)
++|++--|+++... +.+.+.. .+.|.|.+|++.+ +|+ +..+.+
T Consensus 313 ~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~ 361 (407)
T 3tjl_A 313 KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRD 361 (407)
T ss_dssp CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHHH
T ss_pred CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCchHHHHHHc
Confidence 36898888898776 6666655 6799999999888 587 555543
No 312
>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5
Probab=24.81 E-value=41 Score=29.61 Aligned_cols=59 Identities=14% Similarity=0.260 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhccchhhcCcceEE---EcCCCCcccHHHHhc----------CCCCCEEEeecccCChH
Q 039862 101 QAQEVHAELRKWLKDNVSAEVAASTRII---YGGSVNGANCKELAA----------QPDVDGFLVGGASLKPE 160 (173)
Q Consensus 101 ~i~~~~~~Ir~~~~~~~~~~~~~~i~il---YGGSV~~~n~~~~~~----------~~~vDG~LiG~asl~~~ 160 (173)
.++.+..++++++.. |.......+-|. |||-.-|.=+..+.. ..++.|++||...+++.
T Consensus 147 ~a~~~~~fl~~~~~~-fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d~~ 218 (483)
T 1ac5_A 147 VTKHFMDFLENYFKI-FPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDPN 218 (483)
T ss_dssp HHHHHHHHHHHHHHH-CTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCCHH
T ss_pred HHHHHHHHHHHHHHh-ChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCcccch
Confidence 446777888888754 333223444333 788877776666654 25689999999988853
No 313
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=24.78 E-value=99 Score=25.06 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=0.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC-CcccHHHHhc---CCCCCEEEe
Q 039862 92 GTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV-NGANCKELAA---QPDVDGFLV 152 (173)
Q Consensus 92 GtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV-~~~n~~~~~~---~~~vDG~Li 152 (173)
|-+-+.|.++-.++++...+.. +..+||+.|=+= +...+.++.+ ..++||+|+
T Consensus 45 GE~~~Ls~~Er~~v~~~~~~~~--------~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (292)
T 2vc6_A 45 GESPTLSKSEHEQVVEITIKTA--------NGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLI 101 (292)
T ss_dssp GTGGGSCHHHHHHHHHHHHHHH--------TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred cChhhCCHHHHHHHHHHHHHHh--------CCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEE
No 314
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=24.74 E-value=72 Score=29.67 Aligned_cols=48 Identities=19% Similarity=-0.000 Sum_probs=36.2
Q ss_pred cchhhcCCCEEEE-----cccccccccCCC-HHHHHHHHHHHHHCCCeEEEEeC
Q 039862 2 EMLVNLSIPWVIL-----GHSERRALLNES-NDFVGDKVAYALSRGLKVIACVG 49 (173)
Q Consensus 2 ~mLkd~G~~~vii-----GHSERR~~~~E~-~~~i~~Kv~~al~~gl~pIlCvG 49 (173)
+++|++|++.|-+ .|--++--|.-+ +..+.+=++.|.++||..|++.|
T Consensus 47 ~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~G 100 (654)
T 3thd_A 47 LKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 100 (654)
T ss_dssp HHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccC
Confidence 4789999999999 887666444322 23355558999999999999974
No 315
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=24.69 E-value=33 Score=29.03 Aligned_cols=121 Identities=18% Similarity=0.191 Sum_probs=65.5
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCC---CeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCC
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRG---LKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD 79 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~g---l~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~ 79 (173)
.+...|++++++.- |.- -. ..+.+...+..+...+ ..+++=|-... + .+|..+|.. . ..
T Consensus 58 ~a~~~GaD~vilDl-Eha--~~-~~e~~~~~l~a~~~~~~~~~~~~VRv~~~~-------~-----~di~~~Lda-G-a~ 119 (339)
T 1izc_A 58 VLAATKPDFVWIDV-EHG--MF-NRLELHDAIHAAQHHSEGRSLVIVRVPKHD-------E-----VSLSTALDA-G-AA 119 (339)
T ss_dssp HHHHTCCSEEEEET-TTS--CC-CHHHHHHHHHHHHHHTTTCSEEEEECCTTC-------H-----HHHHHHHHH-T-CS
T ss_pred HHHhCCCCEEEEEC-CCC--CC-cHHHHHHHHHHhhhcCCCCCeEEEEeCCCC-------H-----HHHHHHHhC-C-CC
Confidence 45678899999872 211 11 2334555555554445 77777665442 1 356666652 1 11
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHH-HHhccchhhcCcceEEEcC------------------------CC-
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKW-LKDNVSAEVAASTRIIYGG------------------------SV- 133 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~-~~~~~~~~~~~~i~ilYGG------------------------SV- 133 (173)
-+++ | ++-++++++++.+.++.- +..+ |. +.. ...||. -|
T Consensus 120 gIml---P-------~V~saee~~~~~~~~~~~p~g~R-g~--~~~-a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIE 185 (339)
T 1izc_A 120 GIVI---P-------HVETVEEVREFVKEMYYGPIGRR-SF--SPW-TFSPGIADASLFPNDPYNVATSNNHVCIIPQIE 185 (339)
T ss_dssp EEEE---T-------TCCCHHHHHHHHHHHSCTTTCCC-CC--CST-TCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEEC
T ss_pred EEEe---C-------CCCCHHHHHHHHHHhccCccCcc-cc--cch-hhcccccccccccchhhhhhhcCcCceEEEEEC
Confidence 2222 4 467899998877775431 0000 00 000 111221 11
Q ss_pred ---CcccHHHHhcCCCCCEEEeecc
Q 039862 134 ---NGANCKELAAQPDVDGFLVGGA 155 (173)
Q Consensus 134 ---~~~n~~~~~~~~~vDG~LiG~a 155 (173)
--.|+.+|+..++|||++||..
T Consensus 186 t~~av~nldeIaa~~~vD~l~iG~~ 210 (339)
T 1izc_A 186 SVKGVENVDAIAAMPEIHGLMFGPG 210 (339)
T ss_dssp SHHHHHTHHHHHTCTTCCCEEECHH
T ss_pred hHHHHHHHHHHhcCCCCCEEEECHH
Confidence 0248999999999999999985
No 316
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=24.69 E-value=3.4e+02 Score=23.46 Aligned_cols=50 Identities=12% Similarity=0.112 Sum_probs=32.2
Q ss_pred cchhhcCCCEEEEccccccc-------ccCCC-HHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRA-------LLNES-NDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~-------~~~E~-~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.||++|++.|=+-=+=.|. .+++. -+.+.+-|..|.++||.+||.+=-.
T Consensus 52 ~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 52 NKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp HHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 36789999988653221111 11111 1456777899999999999998544
No 317
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=24.68 E-value=1.5e+02 Score=21.94 Aligned_cols=56 Identities=16% Similarity=0.110 Sum_probs=38.6
Q ss_pred CCC-CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCC--CcccHHHHhcCCCCCEEEeecccCChH
Q 039862 94 GKV-ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSV--NGANCKELAAQPDVDGFLVGGASLKPE 160 (173)
Q Consensus 94 G~~-a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV--~~~n~~~~~~~~~vDG~LiG~asl~~~ 160 (173)
|.| ..++.+.++++.+++. +-.+.+..-|.. .++.+.+++.. +|-+.|+==+.+++
T Consensus 78 GEP~l~~~~l~~l~~~~~~~---------~~~i~i~Tng~~~~~~~~~~~l~~~--~~~v~isld~~~~~ 136 (245)
T 3c8f_A 78 GEAILQAEFVRDWFRACKKE---------GIHTCLDTNGFVRRYDPVIDELLEV--TDLVMLDLKQMNDE 136 (245)
T ss_dssp SCGGGGHHHHHHHHHHHHTT---------TCCEEEEECCCCCCCCHHHHHHHHT--CSEEEEECCCSSHH
T ss_pred CCcCCCHHHHHHHHHHHHHc---------CCcEEEEeCCCcCcCHHHHHHHHHh--CCEEEEeCCCCCHH
Confidence 776 4566567777777653 224667777888 78888888874 78888876665554
No 318
>3ub6_A Chemoreceptor TLPB; homodimer, four-helix bundle, PAS domain, membrane protein; 1.38A {Helicobacter pylori} PDB: 3ub7_A 3ub8_A 3ub9_A*
Probab=24.25 E-value=38 Score=25.63 Aligned_cols=31 Identities=6% Similarity=0.007 Sum_probs=23.6
Q ss_pred Ecc-cccccCCCCCCHHHHHHHHHHHHHHHHhcc
Q 039862 85 YEP-VWAIGTGKVATPAQAQEVHAELRKWLKDNV 117 (173)
Q Consensus 85 YEP-vwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~ 117 (173)
|+| -|.||||.- .++|...+..+|..+.+..
T Consensus 143 ~~~w~W~IgtG~y--~ddi~a~~~~~~~~~~~~~ 174 (181)
T 3ub6_A 143 DEVSQMVIAATSY--YTDINTENKAIKEGVNKVF 174 (181)
T ss_dssp ETTTTEEEEEEEE--HHHHHHHTHHHHHHHHHC-
T ss_pred ECCCCEEEEEeeE--HHHHHHHHHHHHHHHHHHH
Confidence 444 599999986 7888888888888776544
No 319
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=24.14 E-value=80 Score=24.52 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=0.0
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGL 42 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl 42 (173)
..+.+.|. ..+++|.||-..+.+..+. ++.+.+.|+
T Consensus 127 ~~i~~~g~-~~vlaHp~r~~~~~~~~~~----l~~l~~~G~ 162 (247)
T 2wje_A 127 SKILMLGI-TPVIAHIERYDALENNEKR----VRELIDMGC 162 (247)
T ss_dssp HHHHTTTC-EEEETTGGGCGGGTTCHHH----HHHHHHTTC
T ss_pred HHHHHCCC-cEEEEehhhHHHHhhCHHH----HHHHHHCCC
No 320
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=24.11 E-value=67 Score=26.78 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHCCCeEEEEe-CCCHHHHh-cCC---hHHHHHHHHHHHHhccCCCC-CeEEEEccccc--ccCCCCCCH
Q 039862 28 DFVGDKVAYALSRGLKVIACV-GETLEQRE-SGS---TVAVVAEQTKAIAEKISNWD-NVVLAYEPVWA--IGTGKVATP 99 (173)
Q Consensus 28 ~~i~~Kv~~al~~gl~pIlCv-GE~~~~r~-~~~---~~~~l~~Ql~~~l~~v~~~~-~iiIAYEPvwA--IGtG~~a~~ 99 (173)
+.+.+-++.|.+.|...|++. |....+.. ... ..+.+.+.|+.+........ .+.|+|||..- -++....++
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~t~ 195 (386)
T 1muw_A 116 RKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTV 195 (386)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSH
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeCCCCCcccccCCCH
Confidence 346677888889999877653 43200000 011 12333444444332211122 38899999731 122233466
Q ss_pred HHHHHHHH
Q 039862 100 AQAQEVHA 107 (173)
Q Consensus 100 e~i~~~~~ 107 (173)
+++.++++
T Consensus 196 ~~~~~li~ 203 (386)
T 1muw_A 196 GHALAFIE 203 (386)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 66555443
No 321
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=23.95 E-value=30 Score=29.12 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHCCCeEEEEe-CCCH----HHHhcCChHHHHHHHHHHHHhccCCCC-CeEEEEcccccc--cCCCCCCH
Q 039862 28 DFVGDKVAYALSRGLKVIACV-GETL----EQRESGSTVAVVAEQTKAIAEKISNWD-NVVLAYEPVWAI--GTGKVATP 99 (173)
Q Consensus 28 ~~i~~Kv~~al~~gl~pIlCv-GE~~----~~r~~~~~~~~l~~Ql~~~l~~v~~~~-~iiIAYEPvwAI--GtG~~a~~ 99 (173)
+.+.+-+..|.+.|...|++. |-.- .........+.+.+.|..+........ .+.|+|||..-- .+....++
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~t~ 195 (394)
T 1xla_A 116 AKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTV 195 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSH
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCccccCCCH
Confidence 346677888899999877654 4210 000001122333444444332111112 388999997311 11223556
Q ss_pred HHHHHHHH
Q 039862 100 AQAQEVHA 107 (173)
Q Consensus 100 e~i~~~~~ 107 (173)
+++.++++
T Consensus 196 ~~~~~li~ 203 (394)
T 1xla_A 196 GHGLAFIE 203 (394)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 66555443
No 322
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=23.78 E-value=39 Score=23.51 Aligned_cols=19 Identities=11% Similarity=-0.087 Sum_probs=16.6
Q ss_pred ccHHHHhcCCCCCEEEeec
Q 039862 136 ANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 136 ~n~~~~~~~~~vDG~LiG~ 154 (173)
.=|++|+..++|.+|++|.
T Consensus 40 PLA~~LF~i~gVk~Vf~g~ 58 (94)
T 2k1h_A 40 EFINRLFEIEGVKSIFYVL 58 (94)
T ss_dssp HHHHHHHTSTTEEEEEEET
T ss_pred HHHHHhhCCCCeeEEEEeC
Confidence 3477999999999999986
No 323
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=23.74 E-value=1.2e+02 Score=23.18 Aligned_cols=54 Identities=15% Similarity=0.283 Sum_probs=33.5
Q ss_pred ChHHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCC--CCHHHHHHHHHHHHHHHHh
Q 039862 59 STVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKV--ATPAQAQEVHAELRKWLKD 115 (173)
Q Consensus 59 ~~~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~--a~~e~i~~~~~~Ir~~~~~ 115 (173)
...+.|..-...+|......+---||+ | +||||.- +..+-++-+.+.+++++.+
T Consensus 106 ~~~~~L~~~y~~~L~~a~~~~~~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~~l~~ 161 (193)
T 1yd9_A 106 KCEELLEKTVKNCLALADDRKLKSIAF-P--SIGSGRNGFPKQTAAQLILKAISSYFVS 161 (193)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCSEEEE-C--CCSBSTTCBCHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHhCCceEee-c--ccccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 345566666666665332223335777 7 7888775 4445556778889998754
No 324
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=23.57 E-value=2.5e+02 Score=21.44 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=14.1
Q ss_pred HHHHHHCCCeEEEEeC
Q 039862 34 VAYALSRGLKVIACVG 49 (173)
Q Consensus 34 v~~al~~gl~pIlCvG 49 (173)
+..|.+.||.+++++-
T Consensus 107 ~~~a~~~gi~v~~~~~ 122 (387)
T 4awe_A 107 VDSATKTGIKLIVALT 122 (387)
T ss_dssp HHHHHHHTCEEEEECC
T ss_pred HHHHHHcCCEEEEeec
Confidence 7889999999999873
No 325
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=23.54 E-value=39 Score=30.14 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=26.7
Q ss_pred cCcceEEEcCCCCcc-cHHHHhcCCCCCEEEeecccCC
Q 039862 122 AASTRIIYGGSVNGA-NCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 122 ~~~i~ilYGGSV~~~-n~~~~~~~~~vDG~LiG~asl~ 158 (173)
..++||+--|+|... .+.+.+. .|.|+|.||++.+.
T Consensus 401 ~~~ipVia~GGI~~g~Dv~kaLa-lGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 401 KDKLEVFVDGGVRRGTDVLKALC-LGAKGVGLGRPFLY 437 (511)
T ss_dssp BTTBEEEEESSCCSHHHHHHHHH-HTCSEEEECHHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHH
Confidence 346999986666654 4666665 79999999997664
No 326
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=23.50 E-value=84 Score=23.86 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.4
Q ss_pred EEEcCCCCcc--cHHHHhcCCCCCEEEeecccCC
Q 039862 127 IIYGGSVNGA--NCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 127 ilYGGSV~~~--n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++.=|+|+++ |+.+.+. .+.|++.+||+-+.
T Consensus 158 ~iv~gGI~~~g~~~~~~~~-aGad~vvvGr~I~~ 190 (208)
T 2czd_A 158 KILAPGIGAQGGKAKDAVK-AGADYIIVGRAIYN 190 (208)
T ss_dssp EEEECCCCSSTTHHHHHHH-HTCSEEEECHHHHT
T ss_pred EEEECCCCCCCCCHHHHHH-cCCCEEEEChHHhc
Confidence 4466778887 8777775 68999999998765
No 327
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=23.28 E-value=78 Score=22.51 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=20.2
Q ss_pred EcccccccCCCCCCHHHHHHHHHHHHHHHH
Q 039862 85 YEPVWAIGTGKVATPAQAQEVHAELRKWLK 114 (173)
Q Consensus 85 YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~ 114 (173)
++|.|. ....++++.+++.+.||+.|+
T Consensus 108 ~~~~~~---~~~~~~~~l~~~~~~ir~~l~ 134 (135)
T 3r6f_A 108 LMINWK---AKSVSDKEYSEMVEEARLRVS 134 (135)
T ss_dssp CCCCCC---CCCCCHHHHHHHHHHHHHHHH
T ss_pred ceecCC---CCCCCHHHHHHHHHHHHHHhc
Confidence 445662 344689999999999998874
No 328
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=23.07 E-value=94 Score=27.67 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.8
Q ss_pred cceEEEcCCCCcccHHHHhcC-CCCCEEEeec
Q 039862 124 STRIIYGGSVNGANCKELAAQ-PDVDGFLVGG 154 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~-~~vDG~LiG~ 154 (173)
.++|+++|+++.+|+.++... .++|.+=||.
T Consensus 286 ~~kI~aSggld~~~i~~l~~~G~~~~sfGvGT 317 (494)
T 2f7f_A 286 EAKIYASNDLDENTILNLKMQKSKIDVWGVGT 317 (494)
T ss_dssp TCEEEECSSCCHHHHHHHHHTTCCCCEEEECH
T ss_pred ceEEEEECCCCHHHHHHHHHcCCCEEEEecCc
Confidence 688999999999999999873 2356666665
No 329
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=22.86 E-value=1e+02 Score=25.16 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=25.7
Q ss_pred ccHHHHhcCCCCCEEEeecccCCh--HHHHHHHHH
Q 039862 136 ANCKELAAQPDVDGFLVGGASLKP--EFIDIIKSA 168 (173)
Q Consensus 136 ~n~~~~~~~~~vDG~LiG~asl~~--~f~~Ii~~~ 168 (173)
++..+-+...|+||+++....+.. +|.+.++..
T Consensus 115 ~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~ 149 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKF 149 (271)
T ss_dssp HHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 667777788999999999887763 377777664
No 330
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=22.84 E-value=96 Score=27.21 Aligned_cols=50 Identities=16% Similarity=0.239 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhccchhhcCc-ce-EEEcCCCCcccHHHHh----cCCCCCEEEeecc
Q 039862 103 QEVHAELRKWLKDNVSAEVAAS-TR-IIYGGSVNGANCKELA----AQPDVDGFLVGGA 155 (173)
Q Consensus 103 ~~~~~~Ir~~~~~~~~~~~~~~-i~-ilYGGSV~~~n~~~~~----~~~~vDG~LiG~a 155 (173)
.+....+|+.+.+.+| -+. ++ |+++++++.+-+.+|. ...-+|++=||..
T Consensus 313 ~~~~~~~r~~l~d~~G---~~~~~k~Ii~SdgLd~~~i~~l~~~~~~~~~~d~FGVGT~ 368 (441)
T 1vlp_A 313 VEYTKKISHHYHDVLK---LPKFSKIICYSDSLNVEKAITYSHAAKENGMLATFGIGTN 368 (441)
T ss_dssp HHHHHHHHHHHHTTSC---CCTTSSEEEECSSCCHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred HHHHHHHHHHHHHHcC---CCCCceEEEEeCCCCHHHHHHHHHHHHcCCceEEEEeCch
Confidence 3455667777755556 234 78 9999999999999998 4556899999875
No 331
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=22.82 E-value=79 Score=29.93 Aligned_cols=52 Identities=17% Similarity=0.212 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 97 ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 97 a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
...+.+.++++.+|+. | ...++|+.|| +.|....+.+...++|+++-=+...
T Consensus 667 ~~~~~~~~vi~~Lr~~-----G---~~dv~VivGG-~~P~~d~~~l~~~GaD~~f~pgtd~ 718 (762)
T 2xij_A 667 GHKTLVPELIKELNSL-----G---RPDILVMCGG-VIPPQDYEFLFEVGVSNVFGPGTRI 718 (762)
T ss_dssp CHHHHHHHHHHHHHHT-----T---CTTSEEEEEE-SCCGGGHHHHHHHTCCEEECTTCCH
T ss_pred HHHHHHHHHHHHHHhc-----C---CCCCEEEEeC-CCCcccHHHHHhCCCCEEeCCCCCH
Confidence 3455566666666654 2 2358999998 5555556777889999998744433
No 332
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=22.59 E-value=87 Score=26.73 Aligned_cols=44 Identities=25% Similarity=0.209 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhccchhhcCcceEEEcCCCCcccHHHHhcCCCCCEEEee
Q 039862 100 AQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVG 153 (173)
Q Consensus 100 e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG 153 (173)
+.+.++++.||+.. .+++|+-|+-.+++.+..+. ..++|++.||
T Consensus 126 ~~~~e~I~~ir~~~---------~~~~Vi~G~V~T~e~A~~a~-~aGaD~I~Vg 169 (361)
T 3r2g_A 126 KYVGKTLKSLRQLL---------GSRCIMAGNVATYAGADYLA-SCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHHH---------TTCEEEEEEECSHHHHHHHH-HTTCSEEEEC
T ss_pred HhHHHHHHHHHHhc---------CCCeEEEcCcCCHHHHHHHH-HcCCCEEEEc
Confidence 44455666666542 24888887777777766655 4899999995
No 333
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=22.39 E-value=1.2e+02 Score=24.16 Aligned_cols=52 Identities=25% Similarity=0.310 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhccCCCCCeEEEEcccccccCCCC-CCHH-HHHHHHHHHHHHHHh
Q 039862 61 VAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKV-ATPA-QAQEVHAELRKWLKD 115 (173)
Q Consensus 61 ~~~l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~-a~~e-~i~~~~~~Ir~~~~~ 115 (173)
.+.|..-...+|......+---||+ | +||||.- ..++ -++-+.+.+++++.+
T Consensus 150 ~~~L~~~y~~~L~~A~e~~i~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~fl~~ 203 (235)
T 2x47_A 150 AAELRSCYLSSLDLLLEHRLRSVAF-P--CISTGVFGYPCEAAAEIVLATLREWLEQ 203 (235)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEE-C--CTTCSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEe-c--cccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3455555555555332223335777 7 7888875 3444 446678889988764
No 334
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=22.14 E-value=1.7e+02 Score=22.56 Aligned_cols=100 Identities=10% Similarity=0.039 Sum_probs=49.1
Q ss_pred chhhcCCCEEEEcccccc---cccCCCHHHHHHHHHHHHHCCCeEEEEe-------CCCHH---HHh---cCChHHHHHH
Q 039862 3 MLVNLSIPWVILGHSERR---ALLNESNDFVGDKVAYALSRGLKVIACV-------GETLE---QRE---SGSTVAVVAE 66 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR---~~~~E~~~~i~~Kv~~al~~gl~pIlCv-------GE~~~---~r~---~~~~~~~l~~ 66 (173)
.|++.|++.+.+ |...- ....+.-+.+.+-++.|.+.|...|++. |.... .+. .....+.+.+
T Consensus 63 ~l~~~gl~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 141 (301)
T 3cny_A 63 ELKLRNLEIAGQ-WFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCK 141 (301)
T ss_dssp HHHHTTCEECEE-EEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHH
T ss_pred HHHHCCCeEEEE-eccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHH
Confidence 466777766655 32100 0001123456677888999999887765 43210 000 0112233334
Q ss_pred HHHHHHhccCCCCCeEEEEcccccccCCCCCCHHHHHHHHH
Q 039862 67 QTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHA 107 (173)
Q Consensus 67 Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~a~~e~i~~~~~ 107 (173)
.+..+..... ...+.+++||.+ + ....+++++.++++
T Consensus 142 ~l~~l~~~a~-~~gv~l~lE~~~--~-~~~~~~~~~~~l~~ 178 (301)
T 3cny_A 142 GLNHYGEIAA-KYGLKVAYHHHM--G-TGIQTKEETDRLMA 178 (301)
T ss_dssp HHHHHHHHHH-HTTCEEEEECCT--T-SSSCSHHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCEEEEecCC--C-cccCCHHHHHHHHH
Confidence 4444333211 235889999975 1 22345666555444
No 335
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=22.13 E-value=1.8e+02 Score=23.68 Aligned_cols=13 Identities=31% Similarity=0.922 Sum_probs=9.9
Q ss_pred CCCeEEEEcccccc
Q 039862 78 WDNVVLAYEPVWAI 91 (173)
Q Consensus 78 ~~~iiIAYEPvwAI 91 (173)
...+|++| |+|=-
T Consensus 113 aD~iv~~~-P~~w~ 125 (280)
T 4gi5_A 113 ADTVIFQF-PLWWF 125 (280)
T ss_dssp CSEEEEEE-ECBTT
T ss_pred CCEEEEEe-ccccc
Confidence 45788888 99954
No 336
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=22.11 E-value=1e+02 Score=25.30 Aligned_cols=55 Identities=18% Similarity=0.125 Sum_probs=35.7
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC-CCcccHHHHh---cCCC-CCEEEeecc
Q 039862 93 TGKV--ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS-VNGANCKELA---AQPD-VDGFLVGGA 155 (173)
Q Consensus 93 tG~~--a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS-V~~~n~~~~~---~~~~-vDG~LiG~a 155 (173)
||.. .|.++-.++++...+.. +..+||+.|-+ -+...+.++. ...+ +||+|+--=
T Consensus 51 TGE~~~Ls~~Er~~v~~~~~~~~--------~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P 112 (311)
T 3h5d_A 51 TAESPTLTHDEELELFAAVQKVV--------NGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVP 112 (311)
T ss_dssp TTTGGGSCHHHHHHHHHHHHHHS--------CSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECC
T ss_pred ccChhhCCHHHHHHHHHHHHHHh--------CCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 4443 66777677776665542 45699999854 4666665554 3456 499999763
No 337
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=22.01 E-value=46 Score=26.84 Aligned_cols=125 Identities=14% Similarity=0.189 Sum_probs=65.7
Q ss_pred chhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCeE
Q 039862 3 MLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVV 82 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~ii 82 (173)
.+...|+++|++-- |.= -. ..+.+..-+..+...+..|++=|-.... . .|+.++.. ...-++
T Consensus 32 ~a~~~g~D~vilDl-Eha--v~-~~~k~~~~l~a~~~~~~~~~VRVn~~~~--------~----di~~~ld~--G~~gI~ 93 (261)
T 3qz6_A 32 IYAEAGLDYFIVDC-EHA--AY-TFREINHLVSVAKNAGVSVLVRIPQVDR--------A----HVQRLLDI--GAEGFM 93 (261)
T ss_dssp HHHHTTCSEEEEES-SSS--CC-CHHHHHHHHHHHHHHTCEEEEECSSCCH--------H----HHHHHHHH--TCCEEE
T ss_pred HHhcCCcCEEEEec-cCC--CC-CHHHHHHHHHHHhhcCCeEEEEeCCCCH--------H----HHHHHHhc--CCCEEE
Confidence 45667888888742 110 11 1122444455555568888888876422 1 23344431 112233
Q ss_pred EEEcccccccCCCCCCHHHHHHHHHHHHHHH----------Hhccch--------hhcCcceEEEcCCC----CcccHHH
Q 039862 83 LAYEPVWAIGTGKVATPAQAQEVHAELRKWL----------KDNVSA--------EVAASTRIIYGGSV----NGANCKE 140 (173)
Q Consensus 83 IAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~----------~~~~~~--------~~~~~i~ilYGGSV----~~~n~~~ 140 (173)
+ | ++-++++++.+.+.+|.-- ...||. ....+++++ --| --.|+.+
T Consensus 94 l---P-------~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~--~mIEt~~av~~~~e 161 (261)
T 3qz6_A 94 I---P-------GVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIM--AQIEHVKAVEDIDS 161 (261)
T ss_dssp E---T-------TCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEE--EEECCHHHHHTHHH
T ss_pred E---C-------CcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEE--EEECCHHHHHHHHH
Confidence 3 3 4567888888777763100 001110 011233332 112 2367899
Q ss_pred HhcCCCCCEEEeecccC
Q 039862 141 LAAQPDVDGFLVGGASL 157 (173)
Q Consensus 141 ~~~~~~vDG~LiG~asl 157 (173)
|++.+++||+.||..-|
T Consensus 162 Iaa~~~vd~l~iG~~DL 178 (261)
T 3qz6_A 162 ILAVQGVDAVIFGPRDL 178 (261)
T ss_dssp HHTSTTCCEEEECHHHH
T ss_pred HhCCCCCCEEEECHHHH
Confidence 99889999999997533
No 338
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=21.99 E-value=97 Score=26.00 Aligned_cols=30 Identities=30% Similarity=0.334 Sum_probs=22.6
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeec
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~ 154 (173)
++||+.|+-.+++.+..+. ..++|++.|+.
T Consensus 161 ~~~vi~g~v~t~e~A~~a~-~aGaD~I~v~~ 190 (351)
T 2c6q_A 161 QHTIMAGNVVTGEMVEELI-LSGADIIKVGI 190 (351)
T ss_dssp TSEEEEEEECSHHHHHHHH-HTTCSEEEECS
T ss_pred CCeEEEEeCCCHHHHHHHH-HhCCCEEEECC
Confidence 4889988777777655544 58999998853
No 339
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=21.91 E-value=53 Score=25.76 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=27.5
Q ss_pred cceEEEcCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 124 STRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 124 ~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
++|++-||.|+.+....- -..|.|++-.|.-.|
T Consensus 149 ~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~L 181 (188)
T 1vkf_A 149 GRTVIAAGLVETEEEARE-ILKHVSAISTSSRIL 181 (188)
T ss_dssp TSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHH
T ss_pred CCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHH
Confidence 489999999999887666 779999998887543
No 340
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=21.61 E-value=63 Score=26.85 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=34.3
Q ss_pred CcceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC--hH-HHHHHHHHhh
Q 039862 123 ASTRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK--PE-FIDIIKSATV 170 (173)
Q Consensus 123 ~~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~--~~-f~~Ii~~~~~ 170 (173)
..+||+--|+|. .+.+.+.+. .+.|.|-||++.+. |. |.+|++.+.+
T Consensus 276 ~~~pIIg~GGI~s~~Da~e~i~-aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~ 326 (354)
T 3tjx_A 276 PGKLIFGCGGVYTGEDAFLHVL-AGASMVQVGTALQEEGPSIFERLTSELLG 326 (354)
T ss_dssp TTSEEEEESSCCSHHHHHHHHH-HTEEEEEECHHHHHHCTTHHHHHHHHHHH
T ss_pred CCCcEEEeCCcCCHHHHHHHHH-cCCCEEEEChhhhhcCchHHHHHHHHHHH
Confidence 357888766665 555777774 79999999998663 66 8888876543
No 341
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=21.60 E-value=2.9e+02 Score=21.48 Aligned_cols=92 Identities=14% Similarity=0.145 Sum_probs=50.1
Q ss_pred chhhcCCCEEEEcccccccc--cCC----CHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccC
Q 039862 3 MLVNLSIPWVILGHSERRAL--LNE----SNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS 76 (173)
Q Consensus 3 mLkd~G~~~viiGHSERR~~--~~E----~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~ 76 (173)
+|++.|++.+.++ + -..+ -++ ..+.+.+-++.|.+.|...|++ |-. . +...+.+.+.|..+....
T Consensus 76 ~l~~~gl~i~~~~-~-~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~-g~~-~----~~~~~~~~~~l~~l~~~a- 146 (296)
T 2g0w_A 76 ILDEHNMKVTEVE-Y-ITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINC-GLL-E----KIPEEQIIVALGELCDRA- 146 (296)
T ss_dssp HHHHTTCEEEEEE-C-BCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEE-CCC-S----CCCHHHHHHHHHHHHHHH-
T ss_pred HHHHcCCceEeeh-h-hhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEE-cCC-C----CCCHHHHHHHHHHHHHHh-
Confidence 5677777766543 2 1111 011 1234556677788888877755 532 0 112344455555544432
Q ss_pred CCCCeEEEEccc-ccccCCCCCCHHHHHHHHHHH
Q 039862 77 NWDNVVLAYEPV-WAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 77 ~~~~iiIAYEPv-wAIGtG~~a~~e~i~~~~~~I 109 (173)
..+.++|||. |. ...+++++.++++.+
T Consensus 147 --~Gv~l~lE~~~~~----~~~~~~~~~~l~~~v 174 (296)
T 2g0w_A 147 --EELIIGLEFMPYS----GVADLQAAWRVAEAC 174 (296)
T ss_dssp --TTSEEEEECCTTS----SSCSHHHHHHHHHHH
T ss_pred --cCCEEEEEecCCC----CCCCHHHHHHHHHHh
Confidence 4688999996 32 246677766655554
No 342
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=21.59 E-value=96 Score=24.67 Aligned_cols=46 Identities=20% Similarity=0.329 Sum_probs=31.7
Q ss_pred CcceEEEcCCCCcccHHHHhcCCCCCEEEeecccCC-h------HHHHHHHHHhh
Q 039862 123 ASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-P------EFIDIIKSATV 170 (173)
Q Consensus 123 ~~i~ilYGGSV~~~n~~~~~~~~~vDG~LiG~asl~-~------~f~~Ii~~~~~ 170 (173)
.++|++==|+|+++|+.++++... +.+ +||..+. + +|..|-+.+.+
T Consensus 158 p~i~~~ptGGI~~~N~~~~l~aGa-~~~-vgGs~l~~~~~i~~~~~~~i~~~a~~ 210 (217)
T 3lab_A 158 PDIQFCPTGGISKDNYKEYLGLPN-VIC-AGGSWLTESKLLIEGDWNEVTRRASE 210 (217)
T ss_dssp TTCEEEEBSSCCTTTHHHHHHSTT-BCC-EEESGGGCHHHHHHTCHHHHHHHHHH
T ss_pred cCceEEEeCCCCHHHHHHHHHCCC-EEE-EEChhhcChhHHhcCCHHHHHHHHHH
Confidence 368999999999999999998654 444 4444443 2 26666655543
No 343
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=21.43 E-value=41 Score=23.28 Aligned_cols=19 Identities=11% Similarity=-0.006 Sum_probs=16.6
Q ss_pred ccHHHHhcCCCCCEEEeec
Q 039862 136 ANCKELAAQPDVDGFLVGG 154 (173)
Q Consensus 136 ~n~~~~~~~~~vDG~LiG~ 154 (173)
.=|++|+..++|.+|++|.
T Consensus 40 PLA~~LF~i~gVk~Vf~g~ 58 (91)
T 1pqx_A 40 AFINDILKVEGVKSIFHVM 58 (91)
T ss_dssp HHHHHHHHSTTEEEEEEET
T ss_pred HHHHHhhCCCCeeEEEEeC
Confidence 3478999999999999986
No 344
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=21.41 E-value=1.7e+02 Score=23.70 Aligned_cols=100 Identities=17% Similarity=0.091 Sum_probs=56.7
Q ss_pred cchhhcCCCEEEEccc----cccccc--CCCHHHHHHHHHHHHHCCCeE----EEEeCCCHHHHhcCChHHHHHHHHHHH
Q 039862 2 EMLVNLSIPWVILGHS----ERRALL--NESNDFVGDKVAYALSRGLKV----IACVGETLEQRESGSTVAVVAEQTKAI 71 (173)
Q Consensus 2 ~mLkd~G~~~viiGHS----ERR~~~--~E~~~~i~~Kv~~al~~gl~p----IlCvGE~~~~r~~~~~~~~l~~Ql~~~ 71 (173)
+.|+++|++.+.+|.- |-|..+ +-+-+.+-+-++.+.+.|+.. |+-.||+.+++. +-+. .
T Consensus 156 ~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~---------~~l~-~ 225 (350)
T 3t7v_A 156 LKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTI---------LSLR-G 225 (350)
T ss_dssp HHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHH---------HHHH-H
T ss_pred HHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHH---------HHHH-H
Confidence 4689999998887752 222111 345566777789999999862 122367766542 2222 2
Q ss_pred HhccCCCCCeEEEEcccccccCC----CCCCHHHHHHHHHHHHHHH
Q 039862 72 AEKISNWDNVVLAYEPVWAIGTG----KVATPAQAQEVHAELRKWL 113 (173)
Q Consensus 72 l~~v~~~~~iiIAYEPvwAIGtG----~~a~~e~i~~~~~~Ir~~~ 113 (173)
+..+....--+..|-|. =||. .++++++..++++..|-.+
T Consensus 226 l~~l~~~~v~~~~f~p~--~gT~l~~~~~~~~~e~l~~ia~~Rl~l 269 (350)
T 3t7v_A 226 MSTNDPDMVRVMTFLPQ--EGTPLEGFRDKSNLSELKIISVLRLMF 269 (350)
T ss_dssp HHHTCCSEEEEEECCCC--TTSTTTTCCCCCCCCHHHHHHHHHHHS
T ss_pred HHhCCCCEEEecceeeC--CCCcCccCCCCChHHHHHHHHHHHHhC
Confidence 22222111123456663 1332 2367788888888888765
No 345
>3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile}
Probab=21.36 E-value=89 Score=25.90 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=21.6
Q ss_pred cchhhcC-CCEEEEccccc----ccccCCCHHHHHHHHHHH
Q 039862 2 EMLVNLS-IPWVILGHSER----RALLNESNDFVGDKVAYA 37 (173)
Q Consensus 2 ~mLkd~G-~~~viiGHSER----R~~~~E~~~~i~~Kv~~a 37 (173)
..|++-| ++|.+|||.+- +.+=+-+-+.+..++...
T Consensus 98 ~~L~~~gklRWqlVGHGr~e~n~~tlaG~sa~~LA~~L~~f 138 (267)
T 3ho6_A 98 ERLKNKEKVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSF 138 (267)
T ss_dssp GGGTTCSEEEEEEECCCCSSCCSSCBTTBCHHHHHHHHHHH
T ss_pred HHhccCCceEEEEEeCCCCCCCccccCCCCHHHHHHHHHHH
Confidence 4565434 89999999976 223344555555544433
No 346
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=21.19 E-value=1.3e+02 Score=24.91 Aligned_cols=60 Identities=15% Similarity=0.282 Sum_probs=44.2
Q ss_pred cccccCCCCCCHHHHHHHHHHH----HHHHHhccchhhcCcceEEE----cCCCCcccHHHHhcCCCCCEEEeecccC
Q 039862 88 VWAIGTGKVATPAQAQEVHAEL----RKWLKDNVSAEVAASTRIIY----GGSVNGANCKELAAQPDVDGFLVGGASL 157 (173)
Q Consensus 88 vwAIGtG~~a~~e~i~~~~~~I----r~~~~~~~~~~~~~~i~ilY----GGSV~~~n~~~~~~~~~vDG~LiG~asl 157 (173)
+..+|||-..+|++++++...+ ++| ..+. ++| ++-=.|.-+.++++..++=-+.||.+--
T Consensus 35 vrv~gsGaKm~pe~~~~~~~~~~~~~~~~---------~pDf-vI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~ 102 (283)
T 1qv9_A 35 FRVVGTSVKMDPECVEAAVEMALDIAEDF---------EPDF-IVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPG 102 (283)
T ss_dssp EEEEECTTCCSHHHHHHHHHHHHHHHHHH---------CCSE-EEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGG
T ss_pred EEEeccCCCCCHHHHHHHHHHhhhhhhhc---------CCCE-EEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcc
Confidence 3678999999999999988887 444 2223 444 2333456789999999999999988654
No 347
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=21.05 E-value=50 Score=23.87 Aligned_cols=38 Identities=26% Similarity=0.261 Sum_probs=26.0
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGET 51 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~ 51 (173)
+.|++.||+.||+|.--.+ - .....+.|++|+.....+
T Consensus 70 ~~L~~~gv~vVI~g~IG~~------a------~~~L~~~GI~v~~~~~g~ 107 (136)
T 1o13_A 70 NFVKEKGAELVIVRGIGRR------A------IAAFEAMGVKVIKGASGT 107 (136)
T ss_dssp HHHHHTTCSEEECSCCCHH------H------HHHHHHTTCEEECSCCSB
T ss_pred HHHHHCCCCEEEECCCCHH------H------HHHHHHCCCEEEecCCCC
Confidence 5678889999999864332 1 355667899998765443
No 348
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=21.02 E-value=2.7e+02 Score=20.97 Aligned_cols=83 Identities=13% Similarity=0.123 Sum_probs=49.2
Q ss_pred cchhhcCCCEEEEcccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHhccCCCCCe
Q 039862 2 EMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV 81 (173)
Q Consensus 2 ~mLkd~G~~~viiGHSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~~v~~~~~i 81 (173)
++|++.|++.+.++ +- ++.+.+.+.+-++.|.+.|...|++.... + . + +++...... ..+
T Consensus 70 ~~l~~~gl~i~~~~-~~----~~~~~~~~~~~i~~A~~lGa~~v~~~~~~-~------~---~-~~l~~~a~~----~gv 129 (262)
T 3p6l_A 70 ELAASKGIKIVGTG-VY----VAEKSSDWEKMFKFAKAMDLEFITCEPAL-S------D---W-DLVEKLSKQ----YNI 129 (262)
T ss_dssp HHHHHTTCEEEEEE-EE----CCSSTTHHHHHHHHHHHTTCSEEEECCCG-G------G---H-HHHHHHHHH----HTC
T ss_pred HHHHHcCCeEEEEe-cc----CCccHHHHHHHHHHHHHcCCCEEEecCCH-H------H---H-HHHHHHHHH----hCC
Confidence 35788888766543 32 23345567788999999999888875321 1 1 1 333333332 247
Q ss_pred EEEEcccccccCCCCCCHHHHHHHH
Q 039862 82 VLAYEPVWAIGTGKVATPAQAQEVH 106 (173)
Q Consensus 82 iIAYEPvwAIGtG~~a~~e~i~~~~ 106 (173)
.++|||.+- .-...+++++.+++
T Consensus 130 ~l~~En~~~--~~~~~~~~~~~~ll 152 (262)
T 3p6l_A 130 KISVHNHPQ--PSDYWKPENLLKAI 152 (262)
T ss_dssp EEEEECCSS--SSSSSSHHHHHHHH
T ss_pred EEEEEeCCC--ccccCCHHHHHHHH
Confidence 899999852 11223676665544
No 349
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.73 E-value=85 Score=25.54 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC-CCcccHHHHh---cCCCCCEEEeecccC----Ch-----HHH
Q 039862 96 VATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS-VNGANCKELA---AQPDVDGFLVGGASL----KP-----EFI 162 (173)
Q Consensus 96 ~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS-V~~~n~~~~~---~~~~vDG~LiG~asl----~~-----~f~ 162 (173)
+.|.++-.++++...+.. +..+||+.|-+ -+...+.++. ...++||+|+--=+. ++ .|.
T Consensus 52 ~Ls~~Er~~v~~~~~~~~--------~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~ 123 (294)
T 3b4u_A 52 SVGSRERQAILSSFIAAG--------IAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFS 123 (294)
T ss_dssp GSCHHHHHHHHHHHHHTT--------CCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHh--------CCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHH
Confidence 366777777776665542 34689998744 4556665554 467999999965222 21 266
Q ss_pred HHHHHH
Q 039862 163 DIIKSA 168 (173)
Q Consensus 163 ~Ii~~~ 168 (173)
.|.+..
T Consensus 124 ~va~a~ 129 (294)
T 3b4u_A 124 AVFSKI 129 (294)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 776654
No 350
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=20.66 E-value=3.4e+02 Score=21.98 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=69.5
Q ss_pred chhhcCCCEEEE-cccccccccC-CCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhcCChHHHHHHHHHHHHh-ccCCCC
Q 039862 3 MLVNLSIPWVIL-GHSERRALLN-ESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWD 79 (173)
Q Consensus 3 mLkd~G~~~vii-GHSERR~~~~-E~~~~i~~Kv~~al~~gl~pIlCvGE~~~~r~~~~~~~~l~~Ql~~~l~-~v~~~~ 79 (173)
.|.+.|++++++ |.+=.=..+. |--..+-+.+..+....+..|..+|.. ++.+.+ ++.+.+-+ +.
T Consensus 44 ~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~-------~t~~ai-~la~~a~~~Ga---- 111 (304)
T 3l21_A 44 HLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTY-------DTAHSI-RLAKACAAEGA---- 111 (304)
T ss_dssp HHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS-------CHHHHH-HHHHHHHHHTC----
T ss_pred HHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCC-------CHHHHH-HHHHHHHHcCC----
Confidence 466789998765 4421111111 111123344444455567888888865 233332 22222221 22
Q ss_pred CeEEEEcccccccCCCCCCHHHHHHHHHHHHHHHHhccchhhcCcceE-EE------cCCCCcccHHHHhcCCCCCEEEe
Q 039862 80 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRI-IY------GGSVNGANCKELAAQPDVDGFLV 152 (173)
Q Consensus 80 ~iiIAYEPvwAIGtG~~a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~i-lY------GGSV~~~n~~~~~~~~~vDG~Li 152 (173)
.-++.-=|-|. .++.+.+. ++.+.... +-++|| || |-.+.++-..+++..++|-|+=-
T Consensus 112 davlv~~P~y~-----~~s~~~l~---~~f~~va~-------a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKd 176 (304)
T 3l21_A 112 HGLLVVTPYYS-----KPPQRGLQ---AHFTAVAD-------ATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVXD 176 (304)
T ss_dssp SEEEEECCCSS-----CCCHHHHH---HHHHHHHT-------SCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEE
T ss_pred CEEEECCCCCC-----CCCHHHHH---HHHHHHHH-------hcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEEC
Confidence 23444446552 24565544 44444321 124564 56 88899999999998888877765
Q ss_pred ecccCChHHHHHH
Q 039862 153 GGASLKPEFIDII 165 (173)
Q Consensus 153 G~asl~~~f~~Ii 165 (173)
.+..+ ..+.+++
T Consensus 177 ssgd~-~~~~~~~ 188 (304)
T 3l21_A 177 AKADL-HSGAQIM 188 (304)
T ss_dssp CSCCH-HHHHHHH
T ss_pred CCCCH-HHHHHHh
Confidence 43321 2255554
No 351
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=20.48 E-value=1.4e+02 Score=23.16 Aligned_cols=50 Identities=20% Similarity=0.391 Sum_probs=29.1
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccccccCCCC-CCHHH-HHHHHHHHHHHHHhc
Q 039862 64 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKV-ATPAQ-AQEVHAELRKWLKDN 116 (173)
Q Consensus 64 l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~-a~~e~-i~~~~~~Ir~~~~~~ 116 (173)
|..-+..+|......+---||+ | +||||.- .+++. ++-+.+.+++++.+.
T Consensus 113 L~~~y~~~L~~a~~~~i~SIAf-P--~IgtG~~G~p~~~aa~i~~~~v~~fl~~~ 164 (199)
T 3kh6_A 113 VRKTVTSVLEECEQRKYTSVSL-P--AIGTGNAGKNPITVADNIIDAIVDFSSQH 164 (199)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCEEee-c--ccccCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 3333444443222222235677 7 7888876 44444 467788999998753
No 352
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=20.43 E-value=1.4e+02 Score=22.70 Aligned_cols=50 Identities=18% Similarity=0.401 Sum_probs=29.3
Q ss_pred HHHHHHHHHhccCCCCCeEEEEcccccccCCCC-CCH-HHHHHHHHHHHHHHHhc
Q 039862 64 VAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKV-ATP-AQAQEVHAELRKWLKDN 116 (173)
Q Consensus 64 l~~Ql~~~l~~v~~~~~iiIAYEPvwAIGtG~~-a~~-e~i~~~~~~Ir~~~~~~ 116 (173)
|..-...+|......+---||+ | +||||.- .++ +-++-+.+.+++++.+.
T Consensus 102 L~~~y~~~L~~a~~~~~~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~fl~~~ 153 (183)
T 4abl_A 102 VKSSVSSVLQECEKKNYSSICL-P--AIGTGNAKQHPDKVAEAIIDAIEDFVQKG 153 (183)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCeEee-c--cccCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 3344444443222223335777 6 7888876 444 44567889999998753
No 353
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=20.40 E-value=28 Score=30.01 Aligned_cols=32 Identities=28% Similarity=0.352 Sum_probs=24.0
Q ss_pred ccccccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCH
Q 039862 16 HSERRALLNESNDFVGDKVAYALSRGLKVIACVGETL 52 (173)
Q Consensus 16 HSERR~~~~E~~~~i~~Kv~~al~~gl~pIlCvGE~~ 52 (173)
|||+= |..+...+++.+|.+.|= .|+|||.|.
T Consensus 229 HsE~~----~V~~~ta~~in~aka~G~-RViAVGTTs 260 (345)
T 1wdi_A 229 HAEPY----AIPEEVAEAVNRAKAEGR-RVVAVGTTV 260 (345)
T ss_dssp CCEEE----EECHHHHHHHHHHHHTTC-CEEEESHHH
T ss_pred cceEE----EECHHHHHHHHHHHHcCC-eEEEEecch
Confidence 67763 445566778899998885 589999885
No 354
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=20.39 E-value=43 Score=24.32 Aligned_cols=28 Identities=14% Similarity=0.267 Sum_probs=20.0
Q ss_pred EcccccccCCCCCCHHHHHHHHHHHHHHH
Q 039862 85 YEPVWAIGTGKVATPAQAQEVHAELRKWL 113 (173)
Q Consensus 85 YEPvwAIGtG~~a~~e~i~~~~~~Ir~~~ 113 (173)
++|+|.-. ...+++++.+++.+.||+.|
T Consensus 119 ~~~~~~~~-~~~~~~~~~~~~~~~ir~~l 146 (147)
T 3imi_A 119 FGAVWKSH-QNEYTMENLQNIASTIANSV 146 (147)
T ss_dssp EEEEECCC-GGGCCHHHHHHHHHHHHHHC
T ss_pred ceeecccc-CCCCCHHHHHHHHHHHHHhh
Confidence 46778432 23468899999999998754
No 355
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=20.32 E-value=72 Score=27.94 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=28.0
Q ss_pred cceEEEcCCCC-cccHHHHhcCCCCCEEEeecccCC
Q 039862 124 STRIIYGGSVN-GANCKELAAQPDVDGFLVGGASLK 158 (173)
Q Consensus 124 ~i~ilYGGSV~-~~n~~~~~~~~~vDG~LiG~asl~ 158 (173)
++||+--|+|. +.++.+.+. .|.|++.+|++-+.
T Consensus 358 ~ipVia~GGI~~~~di~kala-~GAd~V~iG~~~l~ 392 (514)
T 1jcn_A 358 GVPIIADGGIQTVGHVVKALA-LGASTVMMGSLLAA 392 (514)
T ss_dssp TCCEEEESCCCSHHHHHHHHH-TTCSEEEESTTTTT
T ss_pred CCCEEEECCCCCHHHHHHHHH-cCCCeeeECHHHHc
Confidence 59999978885 678888887 68999999997664
No 356
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=20.28 E-value=1.6e+02 Score=25.10 Aligned_cols=54 Identities=9% Similarity=-0.018 Sum_probs=37.1
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHhccchhhcCcceEEEcCC-CCcccHHHHh---cCCCCCEEEeec
Q 039862 93 TGKV--ATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGS-VNGANCKELA---AQPDVDGFLVGG 154 (173)
Q Consensus 93 tG~~--a~~e~i~~~~~~Ir~~~~~~~~~~~~~~i~ilYGGS-V~~~n~~~~~---~~~~vDG~LiG~ 154 (173)
||.. .|.++=.++++...+.. +..+||+-|-+ -+...+.++. ...++||+|+--
T Consensus 103 TGE~~~Ls~eEr~~vi~~~ve~~--------~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 103 TGEGQLMSWDEHIMLIGHTVNCF--------GGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp TTTGGGSCHHHHHHHHHHHHHHH--------TTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccChhhCCHHHHHHHHHHHHHHh--------CCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 5554 66777777777666653 45699998754 5666666554 357999999965
No 357
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=20.16 E-value=91 Score=21.53 Aligned_cols=32 Identities=13% Similarity=0.446 Sum_probs=22.9
Q ss_pred ChHHHHHHHHHHHH-hccCCCC--CeEEEEccccc
Q 039862 59 STVAVVAEQTKAIA-EKISNWD--NVVLAYEPVWA 90 (173)
Q Consensus 59 ~~~~~l~~Ql~~~l-~~v~~~~--~iiIAYEPvwA 90 (173)
...+.|..++...+ ..+.... .+-+.++|.|-
T Consensus 58 p~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~p~W~ 92 (108)
T 3lno_A 58 PMAGQIVSDVKKVLSTNVPEVNEIEVNVVWNPPWS 92 (108)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCCCEEEEECCSSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCceEEEEEEecCCCC
Confidence 35578888888888 6554433 46788999994
No 358
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=20.08 E-value=2.7e+02 Score=21.09 Aligned_cols=31 Identities=19% Similarity=-0.023 Sum_probs=20.9
Q ss_pred CCeEEEEcccccccCCCCCCHHHHHHHHHHH
Q 039862 79 DNVVLAYEPVWAIGTGKVATPAQAQEVHAEL 109 (173)
Q Consensus 79 ~~iiIAYEPvwAIGtG~~a~~e~i~~~~~~I 109 (173)
..+.|++||.|--|+-...+++++.++++.+
T Consensus 132 ~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 162 (270)
T 3aam_A 132 SRPVLLVENTAGGGEKVGARFEELAWLVADT 162 (270)
T ss_dssp SSSEEEEECCCCCTTBSCCSHHHHHHHHTTS
T ss_pred CCCEEEEecCCCCCCccCCCHHHHHHHHHhC
Confidence 3689999999644443334788877766544
No 359
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=20.06 E-value=1e+02 Score=25.23 Aligned_cols=28 Identities=14% Similarity=0.316 Sum_probs=17.4
Q ss_pred cCCCCCEEEe------------ecccCChH-HHHHHHHHhh
Q 039862 143 AQPDVDGFLV------------GGASLKPE-FIDIIKSATV 170 (173)
Q Consensus 143 ~~~~vDG~Li------------G~asl~~~-f~~Ii~~~~~ 170 (173)
...++||++| |..||.++ |.++++.+..
T Consensus 226 va~Ga~G~~IE~H~~~d~al~D~~~sl~p~~l~~lv~~i~~ 266 (280)
T 2qkf_A 226 MATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKA 266 (280)
T ss_dssp HTTCCSEEEEEC----------------CCHHHHHHHHHHH
T ss_pred HHcCCCEEEEeecCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 3689999999 66788865 9998887653
Done!