Query         039863
Match_columns 563
No_of_seqs    415 out of 3986
Neff          10.3
Searched_HMMs 46136
Date          Fri Mar 29 02:45:12 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039863.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039863hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02876 ankyrin repeat protei 100.0 1.9E-47 4.2E-52  412.6  34.7  367   25-437    37-486 (682)
  2 PHA02946 ankyin-like protein;  100.0 2.6E-44 5.6E-49  364.3  32.3  278  106-439    84-367 (446)
  3 KOG0510 Ankyrin repeat protein 100.0 4.4E-45 9.6E-50  362.3  22.9  339   22-433    54-416 (929)
  4 PHA02876 ankyrin repeat protei 100.0   2E-44 4.3E-49  389.2  29.7  338   31-438     4-453 (682)
  5 PHA02946 ankyin-like protein;  100.0 9.8E-44 2.1E-48  360.1  30.1  306   21-416    64-377 (446)
  6 PHA02874 ankyrin repeat protei 100.0   1E-41 2.3E-46  348.8  30.6  319   32-433     4-329 (434)
  7 PHA02716 CPXV016; CPX019; EVM0 100.0 5.7E-42 1.2E-46  356.4  28.7  334   37-438   150-546 (764)
  8 PHA02730 ankyrin-like protein; 100.0 9.8E-42 2.1E-46  347.7  29.1  355   21-436    32-505 (672)
  9 PHA02917 ankyrin-like protein; 100.0 2.1E-41 4.5E-46  355.5  29.3  399   11-436    11-494 (661)
 10 PHA02874 ankyrin repeat protei 100.0 4.4E-41 9.5E-46  344.2  29.9  285  106-438    13-299 (434)
 11 KOG0510 Ankyrin repeat protein 100.0 4.4E-41 9.6E-46  334.0  24.2  314   19-401    78-416 (929)
 12 KOG4177 Ankyrin [Cell wall/mem 100.0 6.9E-41 1.5E-45  353.9  16.1  367   20-440   233-619 (1143)
 13 PHA03095 ankyrin-like protein; 100.0 4.5E-39 9.8E-44  334.6  28.5  286  106-426    26-322 (471)
 14 PHA03095 ankyrin-like protein; 100.0 8.2E-39 1.8E-43  332.7  25.9  298   32-395    17-323 (471)
 15 PHA02716 CPXV016; CPX019; EVM0 100.0 1.5E-38 3.3E-43  330.8  26.9  355   10-424   153-570 (764)
 16 PHA03100 ankyrin repeat protei 100.0 3.3E-38 7.1E-43  328.8  27.7  284  106-424    14-313 (480)
 17 PHA02730 ankyrin-like protein; 100.0   6E-38 1.3E-42  320.0  27.7  336   44-438    22-473 (672)
 18 PHA02878 ankyrin repeat protei 100.0 6.8E-38 1.5E-42  324.4  26.3  324   32-432     3-344 (477)
 19 PHA02878 ankyrin repeat protei 100.0 2.3E-37 4.9E-42  320.5  27.4  277  122-437    31-310 (477)
 20 PHA03100 ankyrin repeat protei 100.0 1.5E-37 3.2E-42  323.9  25.9  282   40-392    13-313 (480)
 21 PHA02917 ankyrin-like protein; 100.0 1.5E-36 3.2E-41  318.9  29.3  342   42-438    12-463 (661)
 22 KOG4177 Ankyrin [Cell wall/mem 100.0 2.4E-38 5.3E-43  334.6  15.8  381   13-439   259-656 (1143)
 23 KOG0508 Ankyrin repeat protein 100.0 6.1E-36 1.3E-40  279.7  22.9  214   33-312     8-236 (615)
 24 PHA02989 ankyrin repeat protei 100.0 6.7E-35 1.4E-39  302.9  29.2  277  106-420    15-315 (494)
 25 PHA02791 ankyrin-like protein; 100.0   5E-35 1.1E-39  275.7  24.7  235  138-420     9-246 (284)
 26 PHA02791 ankyrin-like protein; 100.0 3.5E-35 7.7E-40  276.8  22.7  229  106-381    11-242 (284)
 27 PHA02989 ankyrin repeat protei 100.0 3.4E-34 7.4E-39  297.6  28.1  281   38-381    12-311 (494)
 28 PHA02875 ankyrin repeat protei 100.0   1E-33 2.3E-38  288.7  29.2  243  128-406     2-249 (413)
 29 KOG4412 26S proteasome regulat 100.0 4.2E-35 9.1E-40  240.1  14.5  207  212-437     4-214 (226)
 30 PHA02875 ankyrin repeat protei 100.0 7.4E-34 1.6E-38  289.7  27.1  244  106-380    14-262 (413)
 31 PHA02798 ankyrin-like protein; 100.0 4.6E-33   1E-37  288.8  27.5  285  106-427    17-324 (489)
 32 KOG4412 26S proteasome regulat 100.0 5.6E-34 1.2E-38  233.5  15.4  208  177-403     3-212 (226)
 33 PHA02792 ankyrin-like protein; 100.0 9.8E-33 2.1E-37  278.8  26.3  379   32-436     6-452 (631)
 34 KOG0508 Ankyrin repeat protein 100.0 2.5E-33 5.4E-38  262.3  18.5  190   23-277    36-236 (615)
 35 PHA02798 ankyrin-like protein; 100.0 2.2E-32 4.7E-37  283.7  26.1  283    7-351    13-317 (489)
 36 PHA02792 ankyrin-like protein; 100.0   9E-31 1.9E-35  264.6  29.0  347   11-421    53-480 (631)
 37 KOG0509 Ankyrin repeat and DHH 100.0 8.4E-30 1.8E-34  249.5  18.2  210  129-369    45-255 (600)
 38 KOG0509 Ankyrin repeat and DHH 100.0   1E-29 2.2E-34  248.9  18.0  206  213-437    46-255 (600)
 39 PHA02859 ankyrin repeat protei  99.9 1.1E-25 2.3E-30  205.3  21.1  180  125-336    18-203 (209)
 40 KOG4369 RTK signaling protein   99.9 1.6E-27 3.5E-32  242.7   8.8  318   28-413   756-1079(2131)
 41 PHA02859 ankyrin repeat protei  99.9   7E-26 1.5E-30  206.5  17.5  176  243-439    20-204 (209)
 42 KOG4369 RTK signaling protein   99.9 1.1E-26 2.4E-31  236.7  11.1  316   56-440   753-1073(2131)
 43 PHA02795 ankyrin-like protein;  99.9 1.4E-25 2.9E-30  219.3  18.2  212  192-427    64-295 (437)
 44 KOG0502 Integral membrane anky  99.9 1.6E-26 3.5E-31  195.6   7.8  238  173-431    58-295 (296)
 45 PHA02795 ankyrin-like protein;  99.9 1.5E-24 3.2E-29  212.0  22.3  233  109-381    64-312 (437)
 46 KOG0502 Integral membrane anky  99.9 6.6E-25 1.4E-29  185.9   8.3  248   32-348    34-281 (296)
 47 KOG0507 CASK-interacting adapt  99.9 2.3E-23   5E-28  206.8  14.6  254  130-406     5-265 (854)
 48 TIGR00870 trp transient-recept  99.9 3.9E-23 8.5E-28  225.4  18.0  244  176-434    16-297 (743)
 49 TIGR00870 trp transient-recept  99.9 7.2E-23 1.6E-27  223.4  18.4  239  127-404    16-299 (743)
 50 KOG0507 CASK-interacting adapt  99.9 8.5E-23 1.8E-27  202.8  14.6  242  179-439     5-266 (854)
 51 PLN03192 Voltage-dependent pot  99.9   7E-22 1.5E-26  216.6  22.6  172  211-403   525-697 (823)
 52 PLN03192 Voltage-dependent pot  99.9 5.6E-22 1.2E-26  217.3  21.4  196   37-300   502-698 (823)
 53 KOG0505 Myosin phosphatase, re  99.9 3.2E-22 6.9E-27  192.2  10.6  231  180-438    43-275 (527)
 54 KOG0514 Ankyrin repeat protein  99.9 3.1E-21 6.8E-26  175.9  13.8  161  122-311   262-427 (452)
 55 KOG0514 Ankyrin repeat protein  99.8 8.6E-21 1.9E-25  173.1  12.6  169  165-381   256-429 (452)
 56 KOG0505 Myosin phosphatase, re  99.8 2.2E-20 4.8E-25  179.6  14.2  229  130-405    42-274 (527)
 57 KOG0512 Fetal globin-inducing   99.8 5.5E-20 1.2E-24  150.3  10.5  142  294-439    66-210 (228)
 58 PHA02743 Viral ankyrin protein  99.8 6.9E-20 1.5E-24  160.6  11.3  144  281-429    10-163 (166)
 59 PHA02743 Viral ankyrin protein  99.8 7.5E-19 1.6E-23  154.1  13.8  145  234-396    10-162 (166)
 60 PHA02741 hypothetical protein;  99.8 2.4E-18 5.1E-23  151.8  15.5  143  106-278     6-154 (169)
 61 PHA02884 ankyrin repeat protei  99.8 3.3E-18 7.1E-23  161.4  17.3  161  121-315    25-186 (300)
 62 PHA02741 hypothetical protein;  99.8 4.1E-18 8.8E-23  150.3  15.7  134  167-314    11-155 (169)
 63 PHA02884 ankyrin repeat protei  99.8 1.3E-17 2.9E-22  157.3  18.2  157  170-349    25-186 (300)
 64 PF13962 PGG:  Domain of unknow  99.8 4.4E-20 9.5E-25  149.4   0.9   61  500-561     1-62  (113)
 65 PHA02736 Viral ankyrin protein  99.8   4E-18 8.7E-23  148.2  12.5  135  121-278    10-148 (154)
 66 PHA02736 Viral ankyrin protein  99.7 1.5E-17 3.3E-22  144.6  11.5  134  169-317     9-152 (154)
 67 KOG0512 Fetal globin-inducing   99.7 9.5E-17 2.1E-21  131.5  13.7  148  180-341    66-214 (228)
 68 KOG0195 Integrin-linked kinase  99.7 7.1E-17 1.5E-21  143.0   8.0  136   33-220     4-142 (448)
 69 KOG3676 Ca2+-permeable cation   99.7 5.2E-16 1.1E-20  157.2  14.4  171  120-313   135-330 (782)
 70 KOG0195 Integrin-linked kinase  99.7 6.3E-17 1.4E-21  143.3   6.7  127  109-252    15-141 (448)
 71 KOG3676 Ca2+-permeable cation   99.6 2.4E-15 5.2E-20  152.4  15.5  198  129-347   102-330 (782)
 72 PF12796 Ank_2:  Ankyrin repeat  99.6 4.6E-15   1E-19  115.8  11.3   89  132-241     1-89  (89)
 73 cd00204 ANK ankyrin repeats;    99.6   2E-14 4.4E-19  120.3  15.0  124  124-276     3-126 (126)
 74 PF12796 Ank_2:  Ankyrin repeat  99.6 6.9E-15 1.5E-19  114.9  10.3   89  295-392     1-89  (89)
 75 cd00204 ANK ankyrin repeats;    99.6 6.4E-14 1.4E-18  117.3  15.4  124  173-311     3-126 (126)
 76 KOG4214 Myotrophin and similar  99.4 1.2E-12 2.5E-17   95.8   9.3  104  130-251     4-107 (117)
 77 KOG4214 Myotrophin and similar  99.4 3.5E-13 7.5E-18   98.5   6.4   89   32-155     5-94  (117)
 78 PF13857 Ank_5:  Ankyrin repeat  99.4 5.9E-13 1.3E-17   92.8   4.4   56  344-402     1-56  (56)
 79 COG0666 Arp FOG: Ankyrin repea  99.4 1.5E-11 3.3E-16  114.8  14.6  129  122-278    67-202 (235)
 80 COG0666 Arp FOG: Ankyrin repea  99.3   2E-10 4.3E-15  107.3  18.9  128  206-348    68-203 (235)
 81 PF13637 Ank_4:  Ankyrin repeat  99.3 6.7E-12 1.4E-16   87.1   6.6   54  128-197     1-54  (54)
 82 KOG0515 p53-interacting protei  99.2 2.9E-11 6.3E-16  116.3   9.2  111  268-381   562-674 (752)
 83 KOG1710 MYND Zn-finger and ank  99.2 2.2E-11 4.7E-16  108.5   7.7  120   30-199    13-134 (396)
 84 PF13637 Ank_4:  Ankyrin repeat  99.2 2.6E-11 5.7E-16   84.1   6.2   54  325-379     1-54  (54)
 85 PTZ00322 6-phosphofructo-2-kin  99.2 8.6E-11 1.9E-15  125.6  13.0  106  130-252    84-196 (664)
 86 PF13857 Ank_5:  Ankyrin repeat  99.2 1.3E-11 2.8E-16   86.0   4.5   56  113-184     1-56  (56)
 87 KOG0515 p53-interacting protei  99.2 6.1E-11 1.3E-15  114.1  10.3  111  106-233   562-674 (752)
 88 KOG1710 MYND Zn-finger and ank  99.2 2.2E-10 4.7E-15  102.3  11.4  111  129-255    13-123 (396)
 89 PTZ00322 6-phosphofructo-2-kin  99.2 1.4E-10   3E-15  124.0  11.2  109  294-404    85-197 (664)
 90 KOG0782 Predicted diacylglycer  98.6 9.6E-08 2.1E-12   93.1   7.5  103  115-233   887-989 (1004)
 91 KOG0783 Uncharacterized conser  98.6 6.4E-08 1.4E-12   98.6   6.4  103   36-188    24-130 (1267)
 92 KOG0782 Predicted diacylglycer  98.6 9.1E-08   2E-12   93.3   6.9  118   32-199   869-989 (1004)
 93 PF13606 Ank_3:  Ankyrin repeat  98.6 7.6E-08 1.6E-12   56.8   3.8   29  127-155     1-29  (30)
 94 KOG0783 Uncharacterized conser  98.6 3.7E-08 8.1E-13  100.3   3.5   94  308-405    35-129 (1267)
 95 KOG0506 Glutaminase (contains   98.5 1.4E-07   3E-12   90.4   5.3   91   28-152   505-597 (622)
 96 PF13606 Ank_3:  Ankyrin repeat  98.4 3.5E-07 7.6E-12   53.9   3.6   29  358-389     1-29  (30)
 97 KOG0818 GTPase-activating prot  98.4 1.6E-06 3.5E-11   83.6   9.6   86  171-256   121-212 (669)
 98 PF00023 Ank:  Ankyrin repeat H  98.4 6.2E-07 1.4E-11   54.6   3.9   32  358-392     1-32  (33)
 99 PF00023 Ank:  Ankyrin repeat H  98.3   1E-06 2.2E-11   53.7   4.0   30  127-156     1-30  (33)
100 KOG0506 Glutaminase (contains   98.3 8.7E-07 1.9E-11   85.0   5.1   90  291-381   506-595 (622)
101 KOG0818 GTPase-activating prot  98.3 3.2E-06 6.9E-11   81.6   8.5   86  294-380   136-221 (669)
102 KOG0522 Ankyrin repeat protein  98.2 4.5E-06 9.8E-11   81.7   7.2   78  107-200    34-111 (560)
103 KOG3609 Receptor-activated Ca2  98.1 3.1E-05 6.6E-10   80.6  13.2  125  127-285    24-158 (822)
104 KOG0522 Ankyrin repeat protein  98.1 6.6E-06 1.4E-10   80.6   7.8   91  246-349    22-112 (560)
105 KOG3609 Receptor-activated Ca2  98.1 1.1E-05 2.3E-10   83.9   8.7  130   27-204    23-158 (822)
106 KOG0705 GTPase-activating prot  98.0 8.9E-06 1.9E-10   80.1   6.7   98   22-154   617-720 (749)
107 KOG0705 GTPase-activating prot  97.9 4.3E-05 9.2E-10   75.5   8.6   93  131-236   627-719 (749)
108 KOG0511 Ankyrin repeat protein  97.9 0.00011 2.4E-09   68.9  10.0   73  179-252    38-110 (516)
109 KOG0521 Putative GTPase activa  97.8 1.9E-05 4.1E-10   84.5   5.1   78  357-437   654-732 (785)
110 KOG0520 Uncharacterized conser  97.7 2.8E-05 6.1E-10   82.6   3.3  133   22-199   567-702 (975)
111 KOG0511 Ankyrin repeat protein  97.6 0.00021 4.6E-09   67.1   7.0   69  130-216    38-107 (516)
112 KOG2384 Major histocompatibili  97.5 0.00022 4.8E-09   60.6   6.3   71  281-351     2-72  (223)
113 KOG0521 Putative GTPase activa  97.5 8.8E-05 1.9E-09   79.5   4.7   80  323-406   654-733 (785)
114 KOG2384 Major histocompatibili  97.4  0.0004 8.6E-09   59.1   6.5   70  170-239     5-74  (223)
115 KOG0520 Uncharacterized conser  97.4 0.00023 4.9E-09   76.0   5.4  125  207-345   570-700 (975)
116 smart00248 ANK ankyrin repeats  96.3  0.0065 1.4E-07   34.7   3.8   27  127-153     1-27  (30)
117 smart00248 ANK ankyrin repeats  95.9   0.015 3.3E-07   33.1   3.9   26  177-202     2-27  (30)
118 KOG2505 Ankyrin repeat protein  95.7   0.011 2.4E-07   58.1   4.2   65  372-436   404-472 (591)
119 PF03158 DUF249:  Multigene fam  95.4    0.15 3.3E-06   43.8   9.4  142  180-380    49-191 (192)
120 PF03158 DUF249:  Multigene fam  95.1    0.21 4.6E-06   43.0   9.1  114  175-346    74-191 (192)
121 KOG2505 Ankyrin repeat protein  94.8   0.035 7.7E-07   54.7   4.4   66  335-403   401-471 (591)
122 PF11929 DUF3447:  Domain of un  91.8    0.26 5.6E-06   36.4   3.9   48  129-199     7-54  (76)
123 PF06128 Shigella_OspC:  Shigel  90.5     1.5 3.3E-05   39.1   7.8   95  129-236   180-279 (284)
124 PF06128 Shigella_OspC:  Shigel  90.1     2.6 5.6E-05   37.7   8.9   44  338-381   230-276 (284)
125 PF11929 DUF3447:  Domain of un  88.9    0.78 1.7E-05   33.9   4.3   48  326-381     7-54  (76)
126 cd07920 Pumilio Pumilio-family  80.5      30 0.00065   33.8  12.4   23   29-51     21-43  (322)
127 cd07920 Pumilio Pumilio-family  63.1      49  0.0011   32.3   9.3  222  124-372    17-250 (322)
128 TIGR02184 Myco_arth_vir_N Myco  59.1     6.2 0.00013   23.3   1.2   23  504-526     8-30  (33)
129 PF09610 Myco_arth_vir_N:  Myco  41.5      15 0.00033   21.6   1.0   20  506-525    10-29  (33)
130 KOG0292 Vesicle coat complex C  40.5 1.8E+02  0.0039   32.3   9.1  159  125-349   620-780 (1202)
131 KOG4591 Uncharacterized conser  40.1      22 0.00048   31.2   2.2   52  355-406   218-271 (280)
132 PLN03218 maturation of RBCL 1;  39.4      53  0.0012   37.9   5.7   34   18-51    428-462 (1060)
133 PLN03081 pentatricopeptide (PP  38.6 5.7E+02   0.012   28.1  15.6  175  181-381   332-519 (697)
134 PLN03218 maturation of RBCL 1;  36.9 1.4E+02   0.003   34.8   8.4   20  130-149   512-531 (1060)
135 PLN03081 pentatricopeptide (PP  32.8 5.8E+02   0.012   28.1  12.5  149  178-347   364-519 (697)
136 PLN03077 Protein ECB2; Provisi  32.8 7.8E+02   0.017   27.9  15.7   25  129-153   226-250 (857)
137 KOG0513 Ca2+-independent phosp  31.0       7 0.00015   40.4  -2.6   34  510-543   441-474 (503)
138 KOG4591 Uncharacterized conser  28.6      43 0.00093   29.5   2.1   52  124-187   218-270 (280)
139 PLN03077 Protein ECB2; Provisi  27.5 9.5E+02    0.02   27.3  14.8   44  332-378   635-679 (857)
140 KOG0513 Ca2+-independent phosp  25.9      29 0.00063   36.0   0.8   46  358-406   135-180 (503)
141 PF04650 YSIRK_signal:  YSIRK t  23.4      55  0.0012   18.6   1.2   14  509-522    13-26  (27)
142 PF13124 DUF3963:  Protein of u  23.1 1.6E+02  0.0035   17.8   3.1   15  493-507    10-24  (40)
143 COG3610 Uncharacterized conser  22.4      56  0.0012   28.0   1.7   20  512-531    10-29  (156)

No 1  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.9e-47  Score=412.62  Aligned_cols=367  Identities=20%  Similarity=0.175  Sum_probs=306.1

Q ss_pred             hchhhHHHHHHHHHcCChhhhhhhhhcccc---ccCCCCCceeeeecccCCCCCCCCCC------------ccc------
Q 039863           25 KNIQLMDNLYEAAVEGHVGKFEEHKAVLHQ---ILTPNENTILHIHITALPNKTMKPNN------------KAN------   83 (563)
Q Consensus        25 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~---~~~~~g~t~Lh~A~~~~~~~~~~~~~------------~~~------   83 (563)
                      .+..++||||.|+..|+.++|+.|++.+++   ..+..|+||||+|+..+..  ++..-            +..      
T Consensus        37 ~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~  114 (682)
T PHA02876         37 NESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNV--MDIVISLTLDCDIILDIKYASIILNK  114 (682)
T ss_pred             cccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCc--cccccccccchhhcccccHHHHHHHH
Confidence            355678999999999999999999999766   4788899999999974321  11000            000      


Q ss_pred             ----------------------------hhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHH
Q 039863           84 ----------------------------SLWRMISTFKKQSSSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIA  135 (563)
Q Consensus        84 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A  135 (563)
                                                  .........+...|        +.+++++|++.+.+ ++.+|..|.||||+|
T Consensus       115 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--------~~~i~k~Ll~~Gad-vn~~d~~G~TpLh~A  185 (682)
T PHA02876        115 HKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQD--------ELLIAEMLLEGGAD-VNAKDIYCITPIHYA  185 (682)
T ss_pred             HHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCC--------cHHHHHHHHhCCCC-CCCCCCCCCCHHHHH
Confidence                                        00001112223456        89999999999987 678899999999999


Q ss_pred             HHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCC--------------
Q 039863          136 ARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDP--------------  201 (563)
Q Consensus       136 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~--------------  201 (563)
                      |..|+.++|++|++.|++...                .+..|.||||+|+..|+.+++++|++.++              
T Consensus       186 a~~G~~~iv~~LL~~Gad~n~----------------~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~  249 (682)
T PHA02876        186 AERGNAKMVNLLLSYGADVNI----------------IALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIR  249 (682)
T ss_pred             HHCCCHHHHHHHHHCCCCcCc----------------cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHH
Confidence            999999999999999998543                56677788888888777777777666544              


Q ss_pred             ---------------CCccccCcCCCcHHHHHHHcCCH-HHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhh
Q 039863          202 ---------------NLSYDANEAGETPLYLAAERGYK-DVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFF  265 (563)
Q Consensus       202 ---------------~~~~~~~~~g~tpL~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~  265 (563)
                                     +++ ..+..|.||||+|+..++. +++++|++.|++++..+..|.||||.|+..++         
T Consensus       250 ~~~~~~~~~Ll~~g~~vn-~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~---------  319 (682)
T PHA02876        250 NEDLETSLLLYDAGFSVN-SIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGY---------  319 (682)
T ss_pred             cCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCC---------
Confidence                           333 3466799999999999986 69999999999999999999999999998872         


Q ss_pred             cccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHc-CChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHH
Q 039863          266 RKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHL-GNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQEL  344 (563)
Q Consensus       266 ~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L  344 (563)
                        ..++++.|+..  +.+++..|..|.||||+|+.. ++.++++.|++.|+++ +.+|..|.||||+|+..|+.+++++|
T Consensus       320 --~~~~v~~Ll~~--gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadi-n~~d~~G~TpLh~Aa~~~~~~iv~~L  394 (682)
T PHA02876        320 --DTENIRTLIML--GADVNAADRLYITPLHQASTLDRNKDIVITLLELGANV-NARDYCDKTPIHYAAVRNNVVIINTL  394 (682)
T ss_pred             --CHHHHHHHHHc--CCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence              47899999987  899999999999999999986 4788999999999988 56799999999999999999999999


Q ss_pred             HHhCCCCccccccCCChHHHHHHHcCC-hHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC--CchhhhccCcccCcc
Q 039863          345 IRSCPSSCELVDDRGWNVFHFAAHSGS-RRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG--SFIKSFVCHPKVDRL  421 (563)
Q Consensus       345 l~~~~~~~~~~d~~g~t~Lh~A~~~~~-~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~--~~~~~~l~~~g~d~~  421 (563)
                      ++.+++. +..+..|.||||+|+..+. ..++++|++.   |+++|.+|..|+||||+|+..+  ..++++|++.|+|++
T Consensus       395 l~~gad~-~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~---gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n  470 (682)
T PHA02876        395 LDYGADI-EALSQKIGTALHFALCGTNPYMSVKTLIDR---GANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVN  470 (682)
T ss_pred             HHCCCCc-cccCCCCCchHHHHHHcCCHHHHHHHHHhC---CCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCC
Confidence            9998876 6688999999999998766 5679999998   8999999999999999999976  357799999999999


Q ss_pred             ccccCCCCHHHHHHhc
Q 039863          422 AFNHQNNSAEDIIRSK  437 (563)
Q Consensus       422 ~~n~~g~t~l~~a~~~  437 (563)
                      .+|..|.||+++|...
T Consensus       471 ~~d~~g~tpl~~a~~~  486 (682)
T PHA02876        471 AINIQNQYPLLIALEY  486 (682)
T ss_pred             CCCCCCCCHHHHHHHh
Confidence            9999999999998753


No 2  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=2.6e-44  Score=364.31  Aligned_cols=278  Identities=15%  Similarity=0.130  Sum_probs=151.3

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCc--HHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGH--YDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHE  183 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~--~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~  183 (563)
                      +.+++++|++++++ ++.+|..|.||||+|+..++  .+++++|++.|++.+.               ..+..|.|||| 
T Consensus        84 ~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~---------------~~d~~g~tpL~-  146 (446)
T PHA02946         84 NNRIVAMLLTHGAD-PNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINN---------------SVDEEGCGPLL-  146 (446)
T ss_pred             CHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccc---------------ccCCCCCcHHH-
Confidence            44455554444433 33444444455554444332  4444445444444221               13344444444 


Q ss_pred             HHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchh
Q 039863          184 AVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGY--KDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTY  261 (563)
Q Consensus       184 A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~  261 (563)
                      |+..|+.+++++|++.+.++. ..|..|.||||+|+..++  .+++++|++.|++++..+..|.||||+|+..+..    
T Consensus       147 aa~~~~~~vv~~Ll~~gad~~-~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~----  221 (446)
T PHA02946        147 ACTDPSERVFKKIMSIGFEAR-IVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVK----  221 (446)
T ss_pred             HHHCCChHHHHHHHhcccccc-ccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCC----
Confidence            333344444555444444443 234444455544443322  3444445554444444444455555544443211    


Q ss_pred             hhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCC-hHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHH
Q 039863          262 YYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGN-YYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYT  340 (563)
Q Consensus       262 ~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~  340 (563)
                            +.+++++|+.   +.+++..|..|.||||+|+..++ .++++.|++.+...      .+++ ++.|+..+..++
T Consensus       222 ------~~~iv~lLl~---gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~------~~~~-~~~a~~~~~~~~  285 (446)
T PHA02946        222 ------NVDIINLLLP---STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVI------TDQT-VNICIFYDRDDV  285 (446)
T ss_pred             ------cHHHHHHHHc---CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCC------CCcH-HHHHHHcCchHH
Confidence                  3344444442   34444444445555554444444 24444444444322      1111 444444444444


Q ss_pred             HHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC-CchhhhccCcccC
Q 039863          341 MQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG-SFIKSFVCHPKVD  419 (563)
Q Consensus       341 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~-~~~~~~l~~~g~d  419 (563)
                      ++.+..++       +..|+||||+|+.+|+.+++++|+++   +       ..|.||||+|+..+ ..++++|+.+|++
T Consensus       286 ~e~l~~~g-------~~~~~TpLh~Aa~~g~~eivk~Ll~~---~-------~~~~t~L~~A~~~~~~~~v~~Ll~~ga~  348 (446)
T PHA02946        286 LEIINDKG-------KQYDSTDFKMAVEVGSIRCVKYLLDN---D-------IICEDAMYYAVLSEYETMVDYLLFNHFS  348 (446)
T ss_pred             HHHHHHcC-------cccCCCHHHHHHHcCCHHHHHHHHHC---C-------CccccHHHHHHHhCHHHHHHHHHHCCCC
Confidence            44444332       23577999999999999999999987   3       25799999999998 4567999999999


Q ss_pred             ccccccCCCCHHHHHHhccc
Q 039863          420 RLAFNHQNNSAEDIIRSKKV  439 (563)
Q Consensus       420 ~~~~n~~g~t~l~~a~~~~~  439 (563)
                      ++.. ..|.||+++|.....
T Consensus       349 ~n~~-~~G~t~l~~a~~~~~  367 (446)
T PHA02946        349 VDSV-VNGHTCMSECVRLNN  367 (446)
T ss_pred             CCCc-cccccHHHHHHHcCC
Confidence            9986 589999999987654


No 3  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=4.4e-45  Score=362.31  Aligned_cols=339  Identities=28%  Similarity=0.296  Sum_probs=300.4

Q ss_pred             hhhhchhhHHHHHHHHHcCChhhhhhhhhc-cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCch
Q 039863           22 VREKNIQLMDNLYEAAVEGHVGKFEEHKAV-LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDD  100 (563)
Q Consensus        22 ~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~-~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  100 (563)
                      .+..+.+|.+++|.|+..+.+     +.+. .....|..|+||||+|+.                          +.   
T Consensus        54 ~~~~~~~gd~~~~~~~~~~y~-----~~~~~~~~a~D~~~n~~l~~a~~--------------------------~~---   99 (929)
T KOG0510|consen   54 TPGKRAFGDTELHHASARNYI-----LSKLAISYAKDSADNTPLHAAVE--------------------------YN---   99 (929)
T ss_pred             cchhhhhchhHHHHHHhhcch-----hhhhhhhhhhhcccCchhHHHhh--------------------------cc---
Confidence            556777788899999888866     2222 233378888999999999                          88   


Q ss_pred             hhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcH
Q 039863          101 REVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTA  180 (563)
Q Consensus       101 ~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~  180 (563)
                           ..+.+++|++.+.+ ..-.|..+.+|+|+|+..|+.+..+.|+++|++++                ..++.|.||
T Consensus       100 -----~~~~i~~Lls~gad-~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvn----------------l~de~~~Tp  157 (929)
T KOG0510|consen  100 -----QGDKIQVLLSYGAD-TPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVN----------------LEDENGFTP  157 (929)
T ss_pred             -----hHHHHHHHHhcCCC-CChhhhhccCchhhccccchHHHHHHHHHhcCCcc----------------ccccCCCch
Confidence                 99999999999887 56788999999999999999999999999998854                488999999


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHh-----cCCCCCCCCCCCCcHHHHHHhhc
Q 039863          181 LHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILS-----TCESPVDHGPMGRTALHAAAFRE  255 (563)
Q Consensus       181 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~g~t~Lh~A~~~~  255 (563)
                      ||.||..++.|..+.|++.+++.. ..+.+|..|+|.|+++|..++.+.++.     ....++..+..+.||||.|+..|
T Consensus       158 Lh~A~~~~~~E~~k~Li~~~a~~~-K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g  236 (929)
T KOG0510|consen  158 LHLAARKNKVEAKKELINKGADPC-KSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGG  236 (929)
T ss_pred             hhHHHhcChHHHHHHHHhcCCCCC-cccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcC
Confidence            999999999998899999999987 578899999999999999999999998     55778889999999999999999


Q ss_pred             cccchhhhhhcccHHHHHHHHhccCCCC-------------CccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCC
Q 039863          256 YTLQTYYYFFRKDREIIKVLLRSSKGTQ-------------TTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPD  322 (563)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~Ll~~~~~~~-------------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~  322 (563)
                                  ++++++.+++.+....             ++..|.+|.||||+|++.|+.+++..|+..|+++ +.++
T Consensus       237 ------------~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I-~~kn  303 (929)
T KOG0510|consen  237 ------------DIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASI-NSKN  303 (929)
T ss_pred             ------------CHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcc-cccC
Confidence                        9999999998744333             3456889999999999999999999999999999 6678


Q ss_pred             CCCChHHHHHHhcCCHHHHHHHHH-hCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCC---CCCCCCChH
Q 039863          323 NEGKIPLHLAAGKGRAYTMQELIR-SCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMN---EKNYDGNTP  398 (563)
Q Consensus       323 ~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in---~~d~~G~Tp  398 (563)
                      .++.||||.||..|+++.++.||+ .+--..+..|..|.||||.|+++||.+++++|++.   |++..   ..|.+|+||
T Consensus       304 ~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~---GA~~~~~~e~D~dg~Ta  380 (929)
T KOG0510|consen  304 KDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNK---GALFLNMSEADSDGNTA  380 (929)
T ss_pred             CCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhc---ChhhhcccccccCCchh
Confidence            999999999999999999999999 55455667788999999999999999999999999   66655   569999999


Q ss_pred             HHHHHHcCC-chhhhccCcccCccccccCCCCHHHH
Q 039863          399 LLEHAVSGS-FIKSFVCHPKVDRLAFNHQNNSAEDI  433 (563)
Q Consensus       399 Lh~A~~~~~-~~~~~l~~~g~d~~~~n~~g~t~l~~  433 (563)
                      ||+|+..|+ .++.+|+.+|+++..+|++|.|++++
T Consensus       381 LH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  381 LHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             hhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            999999995 46799999999999999999999996


No 4  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2e-44  Score=389.17  Aligned_cols=338  Identities=17%  Similarity=0.130  Sum_probs=292.1

Q ss_pred             HHHHHHHHcCChhhhhhhhhc------cccc--cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhh
Q 039863           31 DNLYEAAVEGHVGKFEEHKAV------LHQI--LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDRE  102 (563)
Q Consensus        31 ~~L~~Aa~~g~~~~v~~Ll~~------~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  102 (563)
                      ..||.++..|+.+-+..++..      |.+.  .+..+.||||.|+.                          .|     
T Consensus         4 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~--------------------------~g-----   52 (682)
T PHA02876          4 DDLYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQ--------------------------LR-----   52 (682)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHH--------------------------HH-----
Confidence            378999999998654444433      3332  46678999999999                          99     


Q ss_pred             hhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHH----------------------------------------------
Q 039863          103 VIRGENFVRVILEMCPILLLKANAKGETLLHIAA----------------------------------------------  136 (563)
Q Consensus       103 ~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~----------------------------------------------  136 (563)
                         +.|+|+.|++.+|+.+...|..|.||||+|+                                              
T Consensus        53 ---~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~  129 (682)
T PHA02876         53 ---QIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEACIHILKEAI  129 (682)
T ss_pred             ---hhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence               9999999999999988889999999999776                                              


Q ss_pred             ------------------------HcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHH
Q 039863          137 ------------------------RHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDV  192 (563)
Q Consensus       137 ------------------------~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~i  192 (563)
                                              ..|+.+++++|++.|++++                .+|..|.||||+|+..|+.++
T Consensus       130 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn----------------~~d~~G~TpLh~Aa~~G~~~i  193 (682)
T PHA02876        130 SGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADVN----------------AKDIYCITPIHYAAERGNAKM  193 (682)
T ss_pred             cCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCC----------------CCCCCCCCHHHHHHHCCCHHH
Confidence                                    4466777888888877743                478899999999999999999


Q ss_pred             HHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhc-----------------------------CCCCCCCCCC
Q 039863          193 VKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILST-----------------------------CESPVDHGPM  243 (563)
Q Consensus       193 v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-----------------------------~~~~~~~~~~  243 (563)
                      |++|++.|+++. ..+..|.|||++|+..++.+++++|++.                             |.+++..+..
T Consensus       194 v~~LL~~Gad~n-~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~  272 (682)
T PHA02876        194 VNLLLSYGADVN-IIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDC  272 (682)
T ss_pred             HHHHHHCCCCcC-ccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence            999999999987 4678899999999999988887776654                             4456667788


Q ss_pred             CCcHHHHHHhhccccchhhhhhcccH-HHHHHHHhccCCCCCccCCCCCCCHHHHHHHcC-ChHHHHHHHhcCCCCCccC
Q 039863          244 GRTALHAAAFREYTLQTYYYFFRKDR-EIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLG-NYYVVKELLKADISAAYKP  321 (563)
Q Consensus       244 g~t~Lh~A~~~~~~~~~~~~~~~~~~-~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~~~~~~~~~  321 (563)
                      |.||||.|+..+            +. +++++|++.  +.+++..|..|.||||+|+..| +.++++.|+..|+++ ...
T Consensus       273 g~TpLh~Aa~~~------------~~~~iv~lLl~~--gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi-n~~  337 (682)
T PHA02876        273 KNTPLHHASQAP------------SLSRLVPKLLER--GADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADV-NAA  337 (682)
T ss_pred             CCCHHHHHHhCC------------CHHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCC-CCc
Confidence            999999999988            64 688999986  8999999999999999999999 599999999999988 567


Q ss_pred             CCCCChHHHHHHhc-CCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHH
Q 039863          322 DNEGKIPLHLAAGK-GRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLL  400 (563)
Q Consensus       322 ~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh  400 (563)
                      +..|.||||+|+.. ++.++++.|++.+.+. +.+|..|+||||+|+..++.+++++|++.   |++++..+..|.||||
T Consensus       338 d~~g~TpLh~A~~~~~~~~iv~lLl~~gadi-n~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~---gad~~~~~~~g~T~Lh  413 (682)
T PHA02876        338 DRLYITPLHQASTLDRNKDIVITLLELGANV-NARDYCDKTPIHYAAVRNNVVIINTLLDY---GADIEALSQKIGTALH  413 (682)
T ss_pred             ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCccccCCCCCchHH
Confidence            89999999999985 4678888888887665 77999999999999999999999999999   8899999999999999


Q ss_pred             HHHHcCC--chhhhccCcccCccccccCCCCHHHHHHhcc
Q 039863          401 EHAVSGS--FIKSFVCHPKVDRLAFNHQNNSAEDIIRSKK  438 (563)
Q Consensus       401 ~A~~~~~--~~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~  438 (563)
                      +|+..+.  ..+++|++.|++++.+|..|+||+++|....
T Consensus       414 ~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~  453 (682)
T PHA02876        414 FALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN  453 (682)
T ss_pred             HHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence            9998764  3468999999999999999999999998643


No 5  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=9.8e-44  Score=360.10  Aligned_cols=306  Identities=13%  Similarity=0.087  Sum_probs=260.9

Q ss_pred             hhhhhchhhHHHHHHHHHcCChhhhhhhhhcccc--ccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCC
Q 039863           21 SVREKNIQLMDNLYEAAVEGHVGKFEEHKAVLHQ--ILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSS   98 (563)
Q Consensus        21 ~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~--~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   98 (563)
                      +++..+..|.||||+||..|+.+++++|++.|++  .+|..|.||||+|+.                          .+.
T Consensus        64 dvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~--------------------------~~~  117 (446)
T PHA02946         64 SPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSG--------------------------TDD  117 (446)
T ss_pred             CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH--------------------------cCC
Confidence            4677788888999999999999999999998544  478899999998887                          540


Q ss_pred             chhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCC
Q 039863           99 DDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKD  178 (563)
Q Consensus        99 ~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~  178 (563)
                            ...+++++|++.+.+.....+..|.|||| ||..|+.+++++|++.|++..                .+|..|.
T Consensus       118 ------~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~----------------~~d~~G~  174 (446)
T PHA02946        118 ------EVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR----------------IVDKFGK  174 (446)
T ss_pred             ------chHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccccc----------------ccCCCCC
Confidence                  04889999999998855467889999998 777899999999999998744                4889999


Q ss_pred             cHHHHHHHcC--CHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcC--CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhh
Q 039863          179 TALHEAVRYN--QVDVVKMLTKEDPNLSYDANEAGETPLYLAAERG--YKDVMEDILSTCESPVDHGPMGRTALHAAAFR  254 (563)
Q Consensus       179 t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~  254 (563)
                      ||||+|+..+  +.+++++|++.|.++. ..|..|.||||+|+..+  +.+++++|+. +++++..+..|.||||+|+..
T Consensus       175 t~Lh~A~~~~~~~~~~v~~Ll~~Gadin-~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~  252 (446)
T PHA02946        175 NHIHRHLMSDNPKASTISWMMKLGISPS-KPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKT  252 (446)
T ss_pred             CHHHHHHHhcCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHh
Confidence            9999998755  4699999999999987 47889999999999986  7899999995 899999999999999999998


Q ss_pred             ccccchhhhhhccc-HHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHH
Q 039863          255 EYTLQTYYYFFRKD-REIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAA  333 (563)
Q Consensus       255 ~~~~~~~~~~~~~~-~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~  333 (563)
                      +            + .+++++|+..  +...+     +. +++.|+..+..++++.+...|.       ..|.||||+|+
T Consensus       253 ~------------~~~~~~~~Ll~~--g~~~~-----~~-~~~~a~~~~~~~~~e~l~~~g~-------~~~~TpLh~Aa  305 (446)
T PHA02946        253 L------------SPAHLINKLLST--SNVIT-----DQ-TVNICIFYDRDDVLEIINDKGK-------QYDSTDFKMAV  305 (446)
T ss_pred             C------------ChHHHHHHHHhC--CCCCC-----Cc-HHHHHHHcCchHHHHHHHHcCc-------ccCCCHHHHHH
Confidence            7            6 5889999986  43322     33 4899999999999999988764       34789999999


Q ss_pred             hcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCC-chhhh
Q 039863          334 GKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGS-FIKSF  412 (563)
Q Consensus       334 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~-~~~~~  412 (563)
                      ..|+.+++++|+++++        .|+||||+|+.+++.+++++|+.+   |+++|.. .+|+||||+|+..+. .+++.
T Consensus       306 ~~g~~eivk~Ll~~~~--------~~~t~L~~A~~~~~~~~v~~Ll~~---ga~~n~~-~~G~t~l~~a~~~~~~~~~~~  373 (446)
T PHA02946        306 EVGSIRCVKYLLDNDI--------ICEDAMYYAVLSEYETMVDYLLFN---HFSVDSV-VNGHTCMSECVRLNNPVILSK  373 (446)
T ss_pred             HcCCHHHHHHHHHCCC--------ccccHHHHHHHhCHHHHHHHHHHC---CCCCCCc-cccccHHHHHHHcCCHHHHHH
Confidence            9999999999999753        578999999999999999999999   8899985 689999999999984 45566


Q ss_pred             ccCc
Q 039863          413 VCHP  416 (563)
Q Consensus       413 l~~~  416 (563)
                      |+.+
T Consensus       374 ll~~  377 (446)
T PHA02946        374 LMLH  377 (446)
T ss_pred             HHhc
Confidence            6653


No 6  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1e-41  Score=348.79  Aligned_cols=319  Identities=20%  Similarity=0.170  Sum_probs=274.9

Q ss_pred             HHHHHHHcCChhhhhhhhhcc---ccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhh
Q 039863           32 NLYEAAVEGHVGKFEEHKAVL---HQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGEN  108 (563)
Q Consensus        32 ~L~~Aa~~g~~~~v~~Ll~~~---~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  108 (563)
                      .|+.|+..|+++.++.|++.+   ++..+..|.||||.|+.                          .|        +.+
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~--------------------------~g--------~~~   49 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIR--------------------------SG--------DAK   49 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHH--------------------------cC--------CHH
Confidence            688999999999999999873   44577889999999999                          99        999


Q ss_pred             HHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcC
Q 039863          109 FVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYN  188 (563)
Q Consensus       109 ~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g  188 (563)
                      +|++|++.+++ ++..+..|.||||.|+..|+.++|++|++.|++...                          .++...
T Consensus        50 iv~~Ll~~Ga~-~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~--------------------------~~~~~~  102 (434)
T PHA02874         50 IVELFIKHGAD-INHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSI--------------------------LPIPCI  102 (434)
T ss_pred             HHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc--------------------------chhccC
Confidence            99999999887 577888999999999999999999999999876321                          123345


Q ss_pred             CHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhccc
Q 039863          189 QVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKD  268 (563)
Q Consensus       189 ~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~  268 (563)
                      +.+++++|++.|.++. ..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..+            +
T Consensus       103 ~~~~i~~ll~~g~d~n-~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~------------~  169 (434)
T PHA02874        103 EKDMIKTILDCGIDVN-IKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHN------------F  169 (434)
T ss_pred             CHHHHHHHHHCcCCCC-CCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCC------------c
Confidence            6799999999999887 47888999999999999999999999999999999999999999999999            9


Q ss_pred             HHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhC
Q 039863          269 REIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSC  348 (563)
Q Consensus       269 ~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~  348 (563)
                      .+++++|++.  +.+++..+..|.||||+|+..|+.+++++|++.|+++ ...+..|.||||.|+..+. +.+.+|+. +
T Consensus       170 ~~iv~~Ll~~--g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i-~~~~~~g~TpL~~A~~~~~-~~i~~Ll~-~  244 (434)
T PHA02874        170 FDIIKLLLEK--GAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI-MNKCKNGFTPLHNAIIHNR-SAIELLIN-N  244 (434)
T ss_pred             HHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-cCCCCCCCCHHHHHHHCCh-HHHHHHHc-C
Confidence            9999999997  8888899999999999999999999999999999887 5568899999999998765 56666663 4


Q ss_pred             CCCccccccCCChHHHHHHHcC-ChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC--CchhhhccCcccCcccccc
Q 039863          349 PSSCELVDDRGWNVFHFAAHSG-SRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG--SFIKSFVCHPKVDRLAFNH  425 (563)
Q Consensus       349 ~~~~~~~d~~g~t~Lh~A~~~~-~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~--~~~~~~l~~~g~d~~~~n~  425 (563)
                      .+ ++.+|..|+||||+|+..+ +.+++++|++.   |++++.+|..|+||||+|++.+  ..+++.|+..++.++..+.
T Consensus       245 ~~-in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~---gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~  320 (434)
T PHA02874        245 AS-INDQDIDGSTPLHHAINPPCDIDIIDILLYH---KADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADK  320 (434)
T ss_pred             CC-CCCcCCCCCCHHHHHHhcCCcHHHHHHHHHC---cCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccc
Confidence            44 4778999999999999876 78999999998   8999999999999999999876  3455888888877766555


Q ss_pred             CC-CCHHHH
Q 039863          426 QN-NSAEDI  433 (563)
Q Consensus       426 ~g-~t~l~~  433 (563)
                      .+ .+++..
T Consensus       321 ~~~~~~~~~  329 (434)
T PHA02874        321 LKDSDFLEH  329 (434)
T ss_pred             cchhHHHHH
Confidence            54 333443


No 7  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=5.7e-42  Score=356.38  Aligned_cols=334  Identities=14%  Similarity=0.026  Sum_probs=236.8

Q ss_pred             HHcCChhhhhhhhhcc-ccc--c-CCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHHH
Q 039863           37 AVEGHVGKFEEHKAVL-HQI--L-TPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVRV  112 (563)
Q Consensus        37 a~~g~~~~v~~Ll~~~-~~~--~-~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~  112 (563)
                      ...++++++++|++.| +++  . +..|.||||.|+.                        ..++        +.+++++
T Consensus       150 ~~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~------------------------n~~~--------~~eIVkl  197 (764)
T PHA02716        150 TRGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLG------------------------NMYV--------DIDILEW  197 (764)
T ss_pred             ccCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHH------------------------hccC--------CHHHHHH
Confidence            3468999999999998 554  5 7789999998764                        0056        7899999


Q ss_pred             HHHhCchhhhcccCCCCcHHHHHHHcCc--HHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH---Hc
Q 039863          113 ILEMCPILLLKANAKGETLLHIAARHGH--YDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV---RY  187 (563)
Q Consensus       113 Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~--~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~---~~  187 (563)
                      |++.+.+ ++.+|..|.||||+|+..|+  .++|++|++.|++++                .++..|.||||.|+   ..
T Consensus       198 LLe~GAD-VN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN----------------~kD~~G~TPLh~Ai~~a~n  260 (764)
T PHA02716        198 LCNNGVN-VNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMD----------------MKCVNGMSPIMTYIINIDN  260 (764)
T ss_pred             HHHcCCC-CCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCC----------------CCCCCCCCHHHHHHHhhhc
Confidence            9999987 78889999999999999995  599999999999855                47889999999885   46


Q ss_pred             CCHHHHHHHHhcCCCCccccCcCCCcHHH---HHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhh
Q 039863          188 NQVDVVKMLTKEDPNLSYDANEAGETPLY---LAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYF  264 (563)
Q Consensus       188 g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~---~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~  264 (563)
                      ++.++++.|++....-.   ......+++   .|+..|+.+++++|++.|++++..+..|+||||.|+..+..       
T Consensus       261 ~~~EIvkiLie~~d~n~---~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~-------  330 (764)
T PHA02716        261 INPEITNIYIESLDGNK---VKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNI-------  330 (764)
T ss_pred             cCHHHHHHHHHhccccc---cccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCC-------
Confidence            78899999987642211   111122333   47888999999999999999999999999999987654311       


Q ss_pred             hcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHH--------------cCChHHHHHHHhcCCCCCccCCCCCChHHH
Q 039863          265 FRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAH--------------LGNYYVVKELLKADISAAYKPDNEGKIPLH  330 (563)
Q Consensus       265 ~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~--------------~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~  330 (563)
                         +.+++++|++.  +.+++..|..|+||||+|+.              .++.+++++|++.|+++ ..++..|.||||
T Consensus       331 ---~~eIVklLLe~--GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADI-n~kn~~G~TPLh  404 (764)
T PHA02716        331 ---STDIIKLLHEY--GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADI-TAVNCLGYTPLT  404 (764)
T ss_pred             ---CchHHHHHHHc--CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCC-CCcCCCCCChHH
Confidence               67899999986  88899999999999998865              36789999999999888 567889999998


Q ss_pred             H----HHhcCCHHHHHHHHHhCCCCcc-------ccccCCCh--HHHHHHHcCChHHH------------------HHhh
Q 039863          331 L----AAGKGRAYTMQELIRSCPSSCE-------LVDDRGWN--VFHFAAHSGSRRTV------------------EFLL  379 (563)
Q Consensus       331 ~----A~~~g~~~~v~~Ll~~~~~~~~-------~~d~~g~t--~Lh~A~~~~~~~iv------------------~~Ll  379 (563)
                      .    |...++.+++++|++.+.....       ..+..+.+  ++|.++..+..++.                  .+++
T Consensus       405 ~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~i  484 (764)
T PHA02716        405 SYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAI  484 (764)
T ss_pred             HHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHH
Confidence            3    2235678899988876432100       00111122  13333333222211                  1111


Q ss_pred             hCCCcccCCCCCCCCCChHHHHHHHcCCc------hhhhccCcccCccccccCCCCHHHHHHhcc
Q 039863          380 ENPSLGNLMNEKNYDGNTPLLEHAVSGSF------IKSFVCHPKVDRLAFNHQNNSAEDIIRSKK  438 (563)
Q Consensus       380 ~~~~~~~~in~~d~~G~TpLh~A~~~~~~------~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~  438 (563)
                      ..   +..+|..|..|+||||+|+..+..      .+++|++.|+|++++|+.|+|||++|...+
T Consensus       485 i~---~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g  546 (764)
T PHA02716        485 IE---RYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNN  546 (764)
T ss_pred             Hh---hccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcC
Confidence            11   334566666666666666665521      125666666666666666666666666544


No 8  
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.8e-42  Score=347.67  Aligned_cols=355  Identities=11%  Similarity=0.013  Sum_probs=276.5

Q ss_pred             hhh-hhchhhHHHHHHHHHcC---Chhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhc
Q 039863           21 SVR-EKNIQLMDNLYEAAVEG---HVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKK   94 (563)
Q Consensus        21 ~~~-~~~~~~~~~L~~Aa~~g---~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (563)
                      .++ ..+..|.||||+|+..|   +.+++++|++.|+++  +|..|+||||+|+.++                       
T Consensus        32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~-----------------------   88 (672)
T PHA02730         32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRK-----------------------   88 (672)
T ss_pred             chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcC-----------------------
Confidence            344 77788999999999997   599999999997665  8899999999998810                       


Q ss_pred             cCCCchhhhhhhhhHHHHHHHhCch-hhhcccCCCCcHHHHHHH--cCcHHHHHHHHH-hcCCCCCCCCchhHHHHHHHh
Q 039863           95 QSSSDDREVIRGENFVRVILEMCPI-LLLKANAKGETLLHIAAR--HGHYDIVKVLIA-ECKKPHQNNPEEGVAAARLML  170 (563)
Q Consensus        95 ~~g~~~~~~~~~~~~v~~Ll~~~~~-~l~~~~~~g~t~Lh~A~~--~g~~~iv~~Ll~-~~~~~~~~~~~~~~~~~~~~l  170 (563)
                       ++        +.|++++|++.+.. ..+..+..+.+|||.++.  +++.++|++|+. .+.++...            .
T Consensus        89 -~~--------~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~------------~  147 (672)
T PHA02730         89 -YV--------KSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKN------------T  147 (672)
T ss_pred             -CC--------cHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhh------------h
Confidence             24        59999999999653 134466678999999998  999999999997 55554320            0


Q ss_pred             c-cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccc------cCcCCC-cHHHHH------HHcCCHHHHHHHHhcCCC
Q 039863          171 G-TTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYD------ANEAGE-TPLYLA------AERGYKDVMEDILSTCES  236 (563)
Q Consensus       171 ~-~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~------~~~~g~-tpL~~A------~~~g~~~~v~~Ll~~~~~  236 (563)
                      + ..+..|.+|+++|...++.++|++|++.|++....      .+.... +.||++      ...++.|++++|+++|++
T Consensus       148 ~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~Gad  227 (672)
T PHA02730        148 NYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVS  227 (672)
T ss_pred             hhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCC
Confidence            0 12247899999999999999999999999988411      233344 444433      456789999999999999


Q ss_pred             CCCCCCCCCcHHHHH--HhhccccchhhhhhcccHHHHHHHHh------------------------------ccCCCCC
Q 039863          237 PVDHGPMGRTALHAA--AFREYTLQTYYYFFRKDREIIKVLLR------------------------------SSKGTQT  284 (563)
Q Consensus       237 ~~~~~~~g~t~Lh~A--~~~~~~~~~~~~~~~~~~~~~~~Ll~------------------------------~~~~~~~  284 (563)
                      ++..+..|.||||++  ...+            +.|++++|++                              ..++.+.
T Consensus       228 IN~kd~~G~TpLh~~~~~~~~------------~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  295 (672)
T PHA02730        228 IHGRDEGGSLPIQYYWSCSTI------------DIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDM  295 (672)
T ss_pred             CCCCCCCCCCHHHHHHHcCcc------------cHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcch
Confidence            999999999999963  3333            4566666665                              0012222


Q ss_pred             cc--------------------CCCCCCC---------------------HHHHHHHcC---ChHHHHHHHhcCCCCCcc
Q 039863          285 TK--------------------PDQQGWL---------------------PLHLAAHLG---NYYVVKELLKADISAAYK  320 (563)
Q Consensus       285 ~~--------------------~d~~g~t---------------------pLh~A~~~g---~~~~v~~Ll~~~~~~~~~  320 (563)
                      ..                    .+..|.+                     .||.-...+   +.+++++|+++|+++.. 
T Consensus       296 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~-  374 (672)
T PHA02730        296 EIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDK-  374 (672)
T ss_pred             HHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCc-
Confidence            22                    4555544                     566666655   58999999999999963 


Q ss_pred             CCCCCChHHHHHHhcCC----HHHHHHHHHhCCC-CccccccCCChHHHH---HHHcC---------ChHHHHHhhhCCC
Q 039863          321 PDNEGKIPLHLAAGKGR----AYTMQELIRSCPS-SCELVDDRGWNVFHF---AAHSG---------SRRTVEFLLENPS  383 (563)
Q Consensus       321 ~~~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~-~~~~~d~~g~t~Lh~---A~~~~---------~~~iv~~Ll~~~~  383 (563)
                       +..|.||||+|+..++    .++++.|+++|++ .++..|..|.||||.   |...+         ..+++++|+.+  
T Consensus       375 -k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~--  451 (672)
T PHA02730        375 -TTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKY--  451 (672)
T ss_pred             -CCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhc--
Confidence             3789999999998875    8999999999874 568889999999994   33332         23579999999  


Q ss_pred             cccCCCCCCCCCChHHHHHHHcCC-chhhhccCcccCcccccc-CCCCHHHHHHh
Q 039863          384 LGNLMNEKNYDGNTPLLEHAVSGS-FIKSFVCHPKVDRLAFNH-QNNSAEDIIRS  436 (563)
Q Consensus       384 ~~~~in~~d~~G~TpLh~A~~~~~-~~~~~l~~~g~d~~~~n~-~g~t~l~~a~~  436 (563)
                       |+++|.+|..|+||||+|+..+. .++++|+++|+|++.+|. .|.||+++|..
T Consensus       452 -GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~  505 (672)
T PHA02730        452 -MDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSY  505 (672)
T ss_pred             -ccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHH
Confidence             89999999999999999999884 467999999999999997 59999999975


No 9  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.1e-41  Score=355.49  Aligned_cols=399  Identities=14%  Similarity=0.061  Sum_probs=294.3

Q ss_pred             hhHHHHHHHhh---hhhhchhhHHHHHHHHHc---CChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCC----C
Q 039863           11 NAETRRERLRS---VREKNIQLMDNLYEAAVE---GHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMK----P   78 (563)
Q Consensus        11 ~~~~~~~~l~~---~~~~~~~~~~~L~~Aa~~---g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~----~   78 (563)
                      .++.+++++..   .+..+..|.||||+|+..   |+.+++++|++.|.++  .+..|+||||+|+..++.++++    .
T Consensus        11 ~~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         11 ALDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence            45666666654   445577889999997555   8899999999997665  7888999999999977654321    0


Q ss_pred             -----CCccchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHH--HcCcHHHHHHHHHhc
Q 039863           79 -----NNKANSLWRMISTFKKQSSSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAA--RHGHYDIVKVLIAEC  151 (563)
Q Consensus        79 -----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~--~~g~~~iv~~Ll~~~  151 (563)
                           ...+.........++.++|        +.++|++|++++.+ ++..+..|.||||.|+  ..|+.++|++|+++|
T Consensus        91 Ll~~~~~~n~~~~~~~~~~a~~~~--------~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~G  161 (661)
T PHA02917         91 LLEATGYSNINDFNIFSYMKSKNV--------DVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENG  161 (661)
T ss_pred             HHhccCCCCCCCcchHHHHHhhcC--------CHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcC
Confidence                 0011111223446788899        99999999999988 6788999999999654  578999999999999


Q ss_pred             CCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHH-----------cCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHH
Q 039863          152 KKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVR-----------YNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAE  220 (563)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~-----------~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~  220 (563)
                      ++++..+......  ..........+.||||+|+.           .++.+++++|++.|++++ ..|..|.||||+|+.
T Consensus       162 a~vn~~d~~~~~g--~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn-~~d~~G~TpLh~A~~  238 (661)
T PHA02917        162 CSVLYEDEDDEYG--YAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPS-SIDKNYCTALQYYIK  238 (661)
T ss_pred             CCccccccccccc--cccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcc-cCCCCCCcHHHHHHH
Confidence            9865321100000  00011223345699999986           468999999999999998 478999999999999


Q ss_pred             cCCH--HHHHHHHhcCCCCC----CCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCc-------cC
Q 039863          221 RGYK--DVMEDILSTCESPV----DHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTT-------KP  287 (563)
Q Consensus       221 ~g~~--~~v~~Ll~~~~~~~----~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~-------~~  287 (563)
                      .|+.  +++++|++ |++.+    ..+..+.+++|.|+.-+...   ......+.+++++|++.  |.+..       ..
T Consensus       239 ~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~---~~~~~v~~~iv~~Li~~--Ga~~~~~~~~~~~~  312 (661)
T PHA02917        239 SSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDY---RYNKDVDLDLVKLFLEN--GKPHGIMCSIVPLW  312 (661)
T ss_pred             cCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhc---cccccchHHHHHHHHhC--CCCCceeEeeeccc
Confidence            9985  79999985 76654    35667888899988422100   00001278999999997  44321       11


Q ss_pred             CC------------CCCCHHHHHH---HcCC--hHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHh-CC
Q 039863          288 DQ------------QGWLPLHLAA---HLGN--YYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRS-CP  349 (563)
Q Consensus       288 d~------------~g~tpLh~A~---~~g~--~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~  349 (563)
                      +.            .+.+++|.+.   ..|.  .+++++|++.|+++ +.++..|.++.    .....+++++|+.. |+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdv-n~~~~~g~~~~----~~~~~~~i~~LL~~~ga  387 (661)
T PHA02917        313 RNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVV-NKEAIHGYFRN----INIDSYTMKYLLKKEGG  387 (661)
T ss_pred             ccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCC-CCCCccccchh----hcCCHHHHHHHHHhcCC
Confidence            11            2333444333   4665  55999999999999 45678888754    36677899999975 55


Q ss_pred             CCccccccCCChHHHHHHHcC-----------------------ChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC
Q 039863          350 SSCELVDDRGWNVFHFAAHSG-----------------------SRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG  406 (563)
Q Consensus       350 ~~~~~~d~~g~t~Lh~A~~~~-----------------------~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~  406 (563)
                      +..+ .+.+|+||||.|++.+                       ..+++++|+++   |+++|.+|..|+||||+|+..+
T Consensus       388 ~~~~-~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~---GAdIN~kd~~G~TpLh~Aa~~~  463 (661)
T PHA02917        388 DAVN-HLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPY---LKDINMIDKRGETLLHKAVRYN  463 (661)
T ss_pred             Cccc-cCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHC---CCCCCCCCCCCcCHHHHHHHcC
Confidence            5545 4567999999998543                       25678999999   8999999999999999999988


Q ss_pred             C-chhhhccCcccCccccccCCCCHHHHHHh
Q 039863          407 S-FIKSFVCHPKVDRLAFNHQNNSAEDIIRS  436 (563)
Q Consensus       407 ~-~~~~~l~~~g~d~~~~n~~g~t~l~~a~~  436 (563)
                      . .++++|++.|+|++.+|..|.||+++|..
T Consensus       464 ~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~  494 (661)
T PHA02917        464 KQSLVSLLLESGSDVNIRSNNGYTCIAIAIN  494 (661)
T ss_pred             CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence            4 46699999999999999999999999984


No 10 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.4e-41  Score=344.19  Aligned_cols=285  Identities=23%  Similarity=0.236  Sum_probs=257.2

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV  185 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~  185 (563)
                      +++.++.|+..++..++..+..|.||||.|+..|+.++|++|++.|++++                ..+..|.||||.|+
T Consensus        13 d~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n----------------~~~~~~~t~L~~A~   76 (434)
T PHA02874         13 DIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADIN----------------HINTKIPHPLLTAI   76 (434)
T ss_pred             CHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------------CCCCCCCCHHHHHH
Confidence            99999999988887777888899999999999999999999999999854                36788999999999


Q ss_pred             HcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhh
Q 039863          186 RYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFF  265 (563)
Q Consensus       186 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~  265 (563)
                      ..|+.+++++|++.|.+...           .+......+++++|++.|++++..+..|.||||.|+..+          
T Consensus        77 ~~~~~~iv~~Ll~~g~~~~~-----------~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~----------  135 (434)
T PHA02874         77 KIGAHDIIKLLIDNGVDTSI-----------LPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKG----------  135 (434)
T ss_pred             HcCCHHHHHHHHHCCCCCCc-----------chhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCC----------
Confidence            99999999999999876532           123446789999999999999999999999999999999          


Q ss_pred             cccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHH
Q 039863          266 RKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELI  345 (563)
Q Consensus       266 ~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll  345 (563)
                        +.+++++|++.  +.+++..|..|.||||+|+..|+.+++++|++.|+++ ...+..|.||||+|+..|+.+++++|+
T Consensus       136 --~~~~v~~Ll~~--gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~g~~~iv~~Ll  210 (434)
T PHA02874        136 --DLESIKMLFEY--GADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESPLHNAAEYGDYACIKLLI  210 (434)
T ss_pred             --CHHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence              99999999997  8899999999999999999999999999999999887 456889999999999999999999999


Q ss_pred             HhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC--CchhhhccCcccCcccc
Q 039863          346 RSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG--SFIKSFVCHPKVDRLAF  423 (563)
Q Consensus       346 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~--~~~~~~l~~~g~d~~~~  423 (563)
                      +.+++. +..+..|.||||.|+..+. +++.+|+.    +++++.+|.+|+||||+|+..+  ..++++|+++|+|++.+
T Consensus       211 ~~g~~i-~~~~~~g~TpL~~A~~~~~-~~i~~Ll~----~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~  284 (434)
T PHA02874        211 DHGNHI-MNKCKNGFTPLHNAIIHNR-SAIELLIN----NASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIK  284 (434)
T ss_pred             hCCCCC-cCCCCCCCCHHHHHHHCCh-HHHHHHHc----CCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCC
Confidence            998875 6688899999999999875 56677764    6789999999999999999876  45779999999999999


Q ss_pred             ccCCCCHHHHHHhcc
Q 039863          424 NHQNNSAEDIIRSKK  438 (563)
Q Consensus       424 n~~g~t~l~~a~~~~  438 (563)
                      |..|.||+++|....
T Consensus       285 d~~g~TpL~~A~~~~  299 (434)
T PHA02874        285 DNKGENPIDTAFKYI  299 (434)
T ss_pred             CCCCCCHHHHHHHhC
Confidence            999999999998643


No 11 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=4.4e-41  Score=333.96  Aligned_cols=314  Identities=25%  Similarity=0.305  Sum_probs=286.2

Q ss_pred             HhhhhhhchhhHHHHHHHHHcCChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccC
Q 039863           19 LRSVREKNIQLMDNLYEAAVEGHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQS   96 (563)
Q Consensus        19 l~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (563)
                      +......|..+.++||.|+.....+.+++|++.|++.  .+.++.+|+|+|+.                          .
T Consensus        78 ~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~--------------------------~  131 (929)
T KOG0510|consen   78 LAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAAD--------------------------S  131 (929)
T ss_pred             hhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccc--------------------------c
Confidence            3345667777788999999999999999999996555  88999999999999                          9


Q ss_pred             CCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCC
Q 039863           97 SSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEA  176 (563)
Q Consensus        97 g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~  176 (563)
                      |        +.++.+.|++.+.+ ++..+..|.||||.||..++.|..+.|++.|+++..                .|.+
T Consensus       132 ~--------~~s~L~~Ll~~~~d-vnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K----------------~~~~  186 (929)
T KOG0510|consen  132 G--------NYSCLKLLLDYGAD-VNLEDENGFTPLHLAARKNKVEAKKELINKGADPCK----------------SDID  186 (929)
T ss_pred             c--------hHHHHHHHHHhcCC-ccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCc----------------ccCc
Confidence            9        99999999999955 788999999999999999999999999999999765                7889


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHh-----cCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCC---------------
Q 039863          177 KDTALHEAVRYNQVDVVKMLTK-----EDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCES---------------  236 (563)
Q Consensus       177 g~t~L~~A~~~g~~~iv~~Ll~-----~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~---------------  236 (563)
                      |++|+|.|+++|..++.+.++.     +...++. .+..+.+|||.|+..|+.++++.+++.+..               
T Consensus       187 ~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~-~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kel  265 (929)
T KOG0510|consen  187 GNFPIHEAARSGSKECMEIFLPEHGYERQTHINF-DNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKEL  265 (929)
T ss_pred             CCchHHHHHHhcchhhhhhhhccccchhhccccc-ccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHH
Confidence            9999999999999999999998     4445553 577899999999999999999999998854               


Q ss_pred             CCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHh-cCC
Q 039863          237 PVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLK-ADI  315 (563)
Q Consensus       237 ~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~~~  315 (563)
                      ++..|.+|.||||+|+..|            +++.++.|+..  +.+++.++.++.||||.|+..|+...|+-||+ .+.
T Consensus       266 v~~~d~dg~tpLH~a~r~G------------~~~svd~Ll~~--Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~  331 (929)
T KOG0510|consen  266 VNDEDNDGCTPLHYAARQG------------GPESVDNLLGF--GASINSKNKDEESPLHFAAIYGRINTVERLLQESDT  331 (929)
T ss_pred             hhcccccCCchHHHHHHcC------------ChhHHHHHHHc--CCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCc
Confidence            2446889999999999999            99999999997  99999999999999999999999999999999 777


Q ss_pred             CCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCcc--ccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCC
Q 039863          316 SAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCE--LVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNY  393 (563)
Q Consensus       316 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~--~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~  393 (563)
                      -..+..|-.|.||||.|+++|+..+++.|++.|+...+  ..|..|.||||.|+.+|+..+|++|+.+   |+++..+|+
T Consensus       332 rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~---Ga~I~~~n~  408 (929)
T KOG0510|consen  332 RLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISH---GADIGVKNK  408 (929)
T ss_pred             cccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHc---CCceeeccc
Confidence            77777888999999999999999999999999998875  4599999999999999999999999999   999999999


Q ss_pred             CCChHHHH
Q 039863          394 DGNTPLLE  401 (563)
Q Consensus       394 ~G~TpLh~  401 (563)
                      .|.|++++
T Consensus       409 ~g~SA~~~  416 (929)
T KOG0510|consen  409 KGKSAFDT  416 (929)
T ss_pred             cccccccc
Confidence            99999995


No 12 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=6.9e-41  Score=353.88  Aligned_cols=367  Identities=29%  Similarity=0.346  Sum_probs=282.2

Q ss_pred             hhhhhhchhhHHHHHHHHHcCChhhhhhhhhcc--ccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCC
Q 039863           20 RSVREKNIQLMDNLYEAAVEGHVGKFEEHKAVL--HQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSS   97 (563)
Q Consensus        20 ~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~--~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   97 (563)
                      .++...+..+.+|||.|+..|+++++++|+..+  ++..+-.|+||+|+||.                          .+
T Consensus       233 adv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~--------------------------~~  286 (1143)
T KOG4177|consen  233 ADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAAR--------------------------AG  286 (1143)
T ss_pred             CcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhc--------------------------cc
Confidence            346667777777888888888888888888774  44477778888888888                          77


Q ss_pred             CchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHH----H-------H
Q 039863           98 SDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVA----A-------A  166 (563)
Q Consensus        98 ~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~----~-------~  166 (563)
                              ..+++++|++++.+ +...+..+.||+|+|...|+.++++.++..++.++..+......    .       .
T Consensus       287 --------~~e~~~~ll~~ga~-~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~  357 (1143)
T KOG4177|consen  287 --------QVEVCKLLLQNGAD-VLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVA  357 (1143)
T ss_pred             --------hhhhHhhhhccCcc-cccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHH
Confidence                    77777777777766 45566777777777777777777777777776654422111100    0       0


Q ss_pred             HH------HhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 039863          167 RL------MLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDH  240 (563)
Q Consensus       167 ~~------~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~  240 (563)
                      ..      ........|.||+|.|+.+|..+++++++.++...+ ..+..|.||||.|+..++..+++.+++.+++++..
T Consensus       358 ~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~-~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~  436 (1143)
T KOG4177|consen  358 GALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPN-SAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAK  436 (1143)
T ss_pred             HHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCCcc-cCCCCCcceeeehhhccCcceEEEEeccCCChhhH
Confidence            00      012345567788888888888888888888877754 46777888888888888888888888888888888


Q ss_pred             CCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCcc
Q 039863          241 GPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYK  320 (563)
Q Consensus       241 ~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~  320 (563)
                      +..|.|++|.|+..+.           ..+....+++.  +.+++.....|.||||.|+..|+.+++..|++.++.. ..
T Consensus       437 ~~lG~T~lhvaa~~g~-----------~~~~~~~l~~~--g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~-~~  502 (1143)
T KOG4177|consen  437 AKLGYTPLHVAAKKGR-----------YLQIARLLLQY--GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAND-NL  502 (1143)
T ss_pred             hhcCCChhhhhhhccc-----------HhhhhhhHhhc--CCCcchhccccCcchhhhhccCCchHHHHhhhcCCcc-Cc
Confidence            8888888888887761           35566666664  8999999999999999999999999999999877544 44


Q ss_pred             CCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHH
Q 039863          321 PDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLL  400 (563)
Q Consensus       321 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh  400 (563)
                      ....|.+++|.|...+....++.+++++... ..++..|.||||+|+.+|+.++|++|+++   |++++.+|+.|+||||
T Consensus       503 ~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v-~~~~~r~~TpLh~A~~~g~v~~VkfLLe~---gAdv~ak~~~G~TPLH  578 (1143)
T KOG4177|consen  503 DAKKGLTPLHLAADEDTVKVAKILLEHGANV-DLRTGRGYTPLHVAVHYGNVDLVKFLLEH---GADVNAKDKLGYTPLH  578 (1143)
T ss_pred             cchhccchhhhhhhhhhHHHHHHHhhcCCce-ehhcccccchHHHHHhcCCchHHHHhhhC---CccccccCCCCCChhh
Confidence            5667888888888888888888888887765 66888888999999999999999999998   8899999999999999


Q ss_pred             HHHHcC-CchhhhccCcccCccccccCCCCHHHHHHhcccc
Q 039863          401 EHAVSG-SFIKSFVCHPKVDRLAFNHQNNSAEDIIRSKKVL  440 (563)
Q Consensus       401 ~A~~~~-~~~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~~~  440 (563)
                      .|+..| ..+..+|+++|+++|+.+.+|.||+++|.+...+
T Consensus       579 ~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~  619 (1143)
T KOG4177|consen  579 QAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYL  619 (1143)
T ss_pred             HHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhccc
Confidence            999988 4566888999999999999999999998876543


No 13 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.5e-39  Score=334.64  Aligned_cols=286  Identities=21%  Similarity=0.202  Sum_probs=257.5

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcC---cHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHG---HYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALH  182 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~  182 (563)
                      +.+++++|++.+.+ ++..+..|.||||+|+..|   +.++|++|++.|++.+                .++..|.||||
T Consensus        26 ~~~~v~~Ll~~ga~-vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin----------------~~~~~g~TpLh   88 (471)
T PHA03095         26 TVEEVRRLLAAGAD-VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVN----------------APERCGFTPLH   88 (471)
T ss_pred             CHHHHHHHHHcCCC-cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCC----------------CCCCCCCCHHH
Confidence            99999999999887 6788999999999999999   9999999999999854                47789999999


Q ss_pred             HHHHcC-CHHHHHHHHhcCCCCccccCcCCCcHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccc
Q 039863          183 EAVRYN-QVDVVKMLTKEDPNLSYDANEAGETPLYLAA--ERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQ  259 (563)
Q Consensus       183 ~A~~~g-~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~  259 (563)
                      +|+..| +.+++++|++.|++++ ..+..|.||||+|+  ..++.+++++|++.|++++..+..|.||||.|+..+..  
T Consensus        89 ~A~~~~~~~~iv~lLl~~ga~in-~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~--  165 (471)
T PHA03095         89 LYLYNATTLDVIKLLIKAGADVN-AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNA--  165 (471)
T ss_pred             HHHHcCCcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCC--
Confidence            999999 5999999999999987 47888999999999  55689999999999999999999999999999876621  


Q ss_pred             hhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHc--CChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCC
Q 039863          260 TYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHL--GNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGR  337 (563)
Q Consensus       260 ~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~  337 (563)
                              +.+++++|++.  +.+++..+..|.||||+++..  ++.++++.|++.|+++ ...|..|.||||+|+..|+
T Consensus       166 --------~~~iv~~Ll~~--g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~-~~~d~~g~tpLh~Aa~~~~  234 (471)
T PHA03095        166 --------NVELLRLLIDA--GADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDP-AATDMLGNTPLHSMATGSS  234 (471)
T ss_pred             --------CHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHhcCC
Confidence                    68999999997  888888899999999999975  7789999999999998 5679999999999999987


Q ss_pred             H--HHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCC-chhhhcc
Q 039863          338 A--YTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGS-FIKSFVC  414 (563)
Q Consensus       338 ~--~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~-~~~~~l~  414 (563)
                      .  .+++.|++.+.+. +.+|..|+||||+|+..|+.+++++|++.   |++++.+|.+|+||||+|+..++ .++++|+
T Consensus       235 ~~~~~v~~ll~~g~di-n~~d~~g~TpLh~A~~~~~~~~v~~LL~~---gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL  310 (471)
T PHA03095        235 CKRSLVLPLLIAGISI-NARNRYGQTPLHYAAVFNNPRACRRLIAL---GADINAVSSDGNTPLSLMVRNNNGRAVRAAL  310 (471)
T ss_pred             chHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence            5  5788888887665 77899999999999999999999999999   89999999999999999999984 5669999


Q ss_pred             CcccCccccccC
Q 039863          415 HPKVDRLAFNHQ  426 (563)
Q Consensus       415 ~~g~d~~~~n~~  426 (563)
                      +.+++++.....
T Consensus       311 ~~~~~~~~~~~~  322 (471)
T PHA03095        311 AKNPSAETVAAT  322 (471)
T ss_pred             HhCCCHHHHHHH
Confidence            999998755543


No 14 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=8.2e-39  Score=332.69  Aligned_cols=298  Identities=20%  Similarity=0.211  Sum_probs=262.0

Q ss_pred             HHHHHHHcCChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhH
Q 039863           32 NLYEAAVEGHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENF  109 (563)
Q Consensus        32 ~L~~Aa~~g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  109 (563)
                      ..+.|+..++++++++|++.|+++  .+..|.||||+|+.                          .|..+     +.++
T Consensus        17 ~~~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~--------------------------~~~~~-----~~~i   65 (471)
T PHA03095         17 DYLLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLH--------------------------YSSEK-----VKDI   65 (471)
T ss_pred             HHHHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHH--------------------------hcCCC-----hHHH
Confidence            336788999999999999996555  78889999999998                          43111     8899


Q ss_pred             HHHHHHhCchhhhcccCCCCcHHHHHHHcC-cHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH--H
Q 039863          110 VRVILEMCPILLLKANAKGETLLHIAARHG-HYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV--R  186 (563)
Q Consensus       110 v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g-~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~--~  186 (563)
                      +++|++.+++ ++.++..|.||||+|+..| +.+++++|++.|++++                .++..|.||||+|+  .
T Consensus        66 v~~Ll~~Gad-in~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in----------------~~~~~g~tpLh~a~~~~  128 (471)
T PHA03095         66 VRLLLEAGAD-VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVN----------------AKDKVGRTPLHVYLSGF  128 (471)
T ss_pred             HHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCC----------------CCCCCCCCHHHHHhhCC
Confidence            9999999988 6788889999999999999 5999999999999854                48889999999999  5


Q ss_pred             cCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcC--CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhh
Q 039863          187 YNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERG--YKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYF  264 (563)
Q Consensus       187 ~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~  264 (563)
                      .++.+++++|++.|+++. ..+..|.||||+|+..+  +.+++++|++.|++++..+..|.||||.++.....       
T Consensus       129 ~~~~~iv~~Ll~~gad~~-~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~-------  200 (471)
T PHA03095        129 NINPKVIRLLLRKGADVN-ALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKP-------  200 (471)
T ss_pred             cCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCC-------
Confidence            668999999999999987 57889999999999876  68999999999999988899999999999875311       


Q ss_pred             hcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCCh--HHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHH
Q 039863          265 FRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNY--YVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQ  342 (563)
Q Consensus       265 ~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~--~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~  342 (563)
                         ..++++.|++.  +.+++..|..|.||||+|+..|+.  .+++.|++.|.++ +..|..|+||||+|+..|+.++++
T Consensus       201 ---~~~i~~~Ll~~--g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~di-n~~d~~g~TpLh~A~~~~~~~~v~  274 (471)
T PHA03095        201 ---RARIVRELIRA--GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISI-NARNRYGQTPLHYAAVFNNPRACR  274 (471)
T ss_pred             ---cHHHHHHHHHc--CCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHH
Confidence               78999999997  999999999999999999999875  5788899999888 566899999999999999999999


Q ss_pred             HHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCC
Q 039863          343 ELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDG  395 (563)
Q Consensus       343 ~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G  395 (563)
                      +|++.|.+. +.+|..|+||||+|+.+++.+++++|++.   +.+++..+...
T Consensus       275 ~LL~~gad~-n~~~~~g~tpl~~A~~~~~~~~v~~LL~~---~~~~~~~~~~~  323 (471)
T PHA03095        275 RLIALGADI-NAVSSDGNTPLSLMVRNNNGRAVRAALAK---NPSAETVAATL  323 (471)
T ss_pred             HHHHcCCCC-cccCCCCCCHHHHHHHhCCHHHHHHHHHh---CCCHHHHHHHH
Confidence            999998775 78999999999999999999999999998   55665544433


No 15 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=1.5e-38  Score=330.82  Aligned_cols=355  Identities=14%  Similarity=0.079  Sum_probs=268.7

Q ss_pred             chhHHHHHHHhh----hhhh-chhhHHHHHHHHH--cCChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCCCCC
Q 039863           10 QNAETRRERLRS----VREK-NIQLMDNLYEAAV--EGHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMKPNN   80 (563)
Q Consensus        10 ~~~~~~~~~l~~----~~~~-~~~~~~~L~~Aa~--~g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~   80 (563)
                      .+.+.+..++..    ++.. +..|.+|||.|+.  .|+.+++++|++.|+++  .+..|.||||+|+.           
T Consensus       153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~-----------  221 (764)
T PHA02716        153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLI-----------  221 (764)
T ss_pred             CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-----------
Confidence            455555555544    3444 6678999999864  46789999999996555  78899999999999           


Q ss_pred             ccchhHHHHhhhhccCCCchhhhhhhh--hHHHHHHHhCchhhhcccCCCCcHHHHHH---HcCcHHHHHHHHHhcCCCC
Q 039863           81 KANSLWRMISTFKKQSSSDDREVIRGE--NFVRVILEMCPILLLKANAKGETLLHIAA---RHGHYDIVKVLIAECKKPH  155 (563)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~---~~g~~~iv~~Ll~~~~~~~  155 (563)
                                     .|        +.  ++|++|++.+++ ++.++..|.||||+|+   ..++.++++.|++.+....
T Consensus       222 ---------------~g--------~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~  277 (764)
T PHA02716        222 ---------------TG--------NVCASVIKKIIELGGD-MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK  277 (764)
T ss_pred             ---------------cC--------CCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc
Confidence                           88        64  899999999987 7888999999999985   5689999999998754311


Q ss_pred             CCCCchhHHHHHHHhccCCCCCCcHHH---HHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHH--cCCHHHHHHH
Q 039863          156 QNNPEEGVAAARLMLGTTNEAKDTALH---EAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAE--RGYKDVMEDI  230 (563)
Q Consensus       156 ~~~~~~~~~~~~~~l~~~~~~g~t~L~---~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~--~g~~~~v~~L  230 (563)
                      .                  ....++|+   .|+..|+.+++++|++.|+++. ..|..|.||||+|+.  .++.+++++|
T Consensus       278 ~------------------~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN-~kD~~G~TPLH~Aaa~~~~~~eIVklL  338 (764)
T PHA02716        278 V------------------KNIPMILHSYITLARNIDISVVYSFLQPGVKLH-YKDSAGRTCLHQYILRHNISTDIIKLL  338 (764)
T ss_pred             c------------------ccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee-ccCCCCCCHHHHHHHHhCCCchHHHHH
Confidence            0                  11122343   4789999999999999999987 578999999999875  4679999999


Q ss_pred             HhcCCCCCCCCCCCCcHHHHHHhhccccchh--hhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHH----HHcCCh
Q 039863          231 LSTCESPVDHGPMGRTALHAAAFREYTLQTY--YYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLA----AHLGNY  304 (563)
Q Consensus       231 l~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~--~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A----~~~g~~  304 (563)
                      ++.|++++..+..|+||||.|+.........  ......+.+++++|++.  +.+++..+..|.||||.+    ...++.
T Consensus       339 Le~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~--GADIn~kn~~G~TPLh~y~~~a~n~~~~  416 (764)
T PHA02716        339 HEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL--GADITAVNCLGYTPLTSYICTAQNYMYY  416 (764)
T ss_pred             HHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC--CCCCCCcCCCCCChHHHHHHHHHhcChH
Confidence            9999999999999999999987531000000  00001278999999997  999999999999999942    235779


Q ss_pred             HHHHHHHhcCCCCCcc-------CCCCCChH--HHHHHhcCCHHHHHH------------------HHHhCCCCcccccc
Q 039863          305 YVVKELLKADISAAYK-------PDNEGKIP--LHLAAGKGRAYTMQE------------------LIRSCPSSCELVDD  357 (563)
Q Consensus       305 ~~v~~Ll~~~~~~~~~-------~~~~g~tp--L~~A~~~g~~~~v~~------------------Ll~~~~~~~~~~d~  357 (563)
                      +++++|++.+......       .+..+.+|  +|.++..+..+....                  ++..+. ..+..|.
T Consensus       417 dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~-nvN~~D~  495 (764)
T PHA02716        417 DIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERY-NNAVCET  495 (764)
T ss_pred             HHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhc-cccccCC
Confidence            9999999976532111       01222333  555555544332222                  222222 2356789


Q ss_pred             CCChHHHHHHHcCCh-----HHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCC------chhhhccCcccCccccc
Q 039863          358 RGWNVFHFAAHSGSR-----RTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGS------FIKSFVCHPKVDRLAFN  424 (563)
Q Consensus       358 ~g~t~Lh~A~~~~~~-----~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~------~~~~~l~~~g~d~~~~n  424 (563)
                      .|+||||+|+..|+.     +++++|++.   |+++|.+|.+|+||||+|++.++      .++++|+++|++++...
T Consensus       496 ~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~---GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~~  570 (764)
T PHA02716        496 SGMTPLHVSIISHTNANIVMDSFVYLLSI---QYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIVI  570 (764)
T ss_pred             CCCCHHHHHHHcCCccchhHHHHHHHHhC---CCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchHH
Confidence            999999999999886     456999998   99999999999999999999885      47799999999998773


No 16 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.3e-38  Score=328.84  Aligned_cols=284  Identities=23%  Similarity=0.262  Sum_probs=258.8

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHH--
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHE--  183 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~--  183 (563)
                      ..++++++++.+ +.....+..+.||||.|+..|+.++|++|++.|++++.                .+..+.||||+  
T Consensus        14 ~~~~~~~~~~~~-~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~----------------~~~~~~t~L~~~~   76 (480)
T PHA03100         14 KVKNIKYIIMED-DLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINS----------------STKNNSTPLHYLS   76 (480)
T ss_pred             HHHHHHHHHhcC-ccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCC----------------ccccCcCHHHHHH
Confidence            567889998664 55667788999999999999999999999999998553                67788999999  


Q ss_pred             ---HHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhcccc
Q 039863          184 ---AVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAA--ERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTL  258 (563)
Q Consensus       184 ---A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~  258 (563)
                         |+..++.+++++|++.|+++. ..+..|.||||+|+  ..|+.+++++|++.|++++..+..|.||||.|+..+.  
T Consensus        77 ~~~a~~~~~~~iv~~Ll~~ga~i~-~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--  153 (480)
T PHA03100         77 NIKYNLTDVKEIVKLLLEYGANVN-APDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNK--  153 (480)
T ss_pred             HHHHHhhchHHHHHHHHHCCCCCC-CCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCC--
Confidence               999999999999999999985 68889999999999  9999999999999999999999999999999998873  


Q ss_pred             chhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCC------ChHHHHH
Q 039863          259 QTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEG------KIPLHLA  332 (563)
Q Consensus       259 ~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g------~tpL~~A  332 (563)
                              .+.+++++|++.  +.+++..+..|.||||+|+..|+.+++++|++.|+++. ..+..|      .||||.|
T Consensus       154 --------~~~~iv~~Ll~~--g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~-~~~~~~~~~~~~~t~l~~a  222 (480)
T PHA03100        154 --------IDLKILKLLIDK--GVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN-AGDIETLLFTIFETPLHIA  222 (480)
T ss_pred             --------ChHHHHHHHHHC--CCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc-CCCCCCCcHHHHHhHHHHH
Confidence                    168999999997  88999999999999999999999999999999999884 456667      8999999


Q ss_pred             HhcCC--HHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCC-ch
Q 039863          333 AGKGR--AYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGS-FI  409 (563)
Q Consensus       333 ~~~g~--~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~-~~  409 (563)
                      +..|+  .+++++|++.|.+. +.+|..|.||||+|+..++.+++++|++.   |++++.+|..|.||||+|+..+. .+
T Consensus       223 ~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~---gad~n~~d~~g~tpl~~A~~~~~~~i  298 (480)
T PHA03100        223 ACYNEITLEVVNYLLSYGVPI-NIKDVYGFTPLHYAVYNNNPEFVKYLLDL---GANPNLVNKYGDTPLHIAILNNNKEI  298 (480)
T ss_pred             HHhCcCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCcHHHHHHHhCCHHH
Confidence            99999  99999999998765 77899999999999999999999999999   88999999999999999999884 56


Q ss_pred             hhhccCcccCccccc
Q 039863          410 KSFVCHPKVDRLAFN  424 (563)
Q Consensus       410 ~~~l~~~g~d~~~~n  424 (563)
                      +++|+++|++++..+
T Consensus       299 v~~Ll~~g~~i~~i~  313 (480)
T PHA03100        299 FKLLLNNGPSIKTII  313 (480)
T ss_pred             HHHHHhcCCCHHHHH
Confidence            799999999998754


No 17 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=6e-38  Score=320.02  Aligned_cols=336  Identities=16%  Similarity=0.146  Sum_probs=263.7

Q ss_pred             hhhhhhhc--ccc-ccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhCchh
Q 039863           44 KFEEHKAV--LHQ-ILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVRVILEMCPIL  120 (563)
Q Consensus        44 ~v~~Ll~~--~~~-~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~~  120 (563)
                      .++..++.  +++ .+|..|+||||+|+.                          +|...     +.++|++|+++|++ 
T Consensus        22 ~~~~~~~~~~~in~~kd~~G~TaLh~A~~--------------------------~~~~~-----~~eivklLLs~GAd-   69 (672)
T PHA02730         22 KIKLEIETCHNLSKHIDRRGNNALHCYVS--------------------------NKCDT-----DIKIVRLLLSRGVE-   69 (672)
T ss_pred             HHHHHHHHhcchhhhcCCCCCcHHHHHHH--------------------------cCCcC-----cHHHHHHHHhCCCC-
Confidence            34455554  566 578899999999999                          75000     48999999999988 


Q ss_pred             hhcccCCCCcHHHHHHHcC--cHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHH--cCCHHHHHHH
Q 039863          121 LLKANAKGETLLHIAARHG--HYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVR--YNQVDVVKML  196 (563)
Q Consensus       121 l~~~~~~g~t~Lh~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~--~g~~~iv~~L  196 (563)
                      ++.+|..|.||||+|+..|  +.++|++|++.|++...              +..+..+++|||.++.  +++.++|++|
T Consensus        70 in~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~--------------~~~~~~~d~~l~~y~~s~n~~~~~vk~L  135 (672)
T PHA02730         70 RLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASN--------------ELTSNINDFDLYSYMSSDNIDLRLLKYL  135 (672)
T ss_pred             CcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCc--------------ccccccCCchHHHHHHhcCCcHHHHHHH
Confidence            6788999999999999977  79999999999875421              2356668899999998  8999999999


Q ss_pred             Hh-cCCCCccccC----cCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC--------CCCCCCcHHHHHHhhccccchhhh
Q 039863          197 TK-EDPNLSYDAN----EAGETPLYLAAERGYKDVMEDILSTCESPVD--------HGPMGRTALHAAAFREYTLQTYYY  263 (563)
Q Consensus       197 l~-~~~~~~~~~~----~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~--------~~~~g~t~Lh~A~~~~~~~~~~~~  263 (563)
                      +. .+.+.....+    ..|.+|++++...+++++|++|+++|++++.        ..+...|.||+.+.....      
T Consensus       136 i~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~------  209 (672)
T PHA02730        136 IVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRE------  209 (672)
T ss_pred             HHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhh------
Confidence            97 4445443322    4789999999999999999999999999851        223345667766655311      


Q ss_pred             hhcccHHHHHHHHhccCCCCCccCCCCCCCHHHH--HHHcCChHHHHHHHh-----------------------------
Q 039863          264 FFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHL--AAHLGNYYVVKELLK-----------------------------  312 (563)
Q Consensus       264 ~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~--A~~~g~~~~v~~Ll~-----------------------------  312 (563)
                      -.....+++++|+++  |++++..|..|.||||+  +...|+.|++++|++                             
T Consensus       210 ~~~n~~eiv~lLIs~--GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (672)
T PHA02730        210 SESLSKDVIKCLIDN--NVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFR  287 (672)
T ss_pred             hhccCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhh
Confidence            123389999999997  99999999999999995  555677999999999                             


Q ss_pred             ---cCCCCCc-------------------cCCCCCCh---------------------HHHHHHhcC---CHHHHHHHHH
Q 039863          313 ---ADISAAY-------------------KPDNEGKI---------------------PLHLAAGKG---RAYTMQELIR  346 (563)
Q Consensus       313 ---~~~~~~~-------------------~~~~~g~t---------------------pL~~A~~~g---~~~~v~~Ll~  346 (563)
                         .|++..-                   ..+..|.+                     .||.-...+   +.++++.|++
T Consensus       288 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs  367 (672)
T PHA02730        288 VTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLD  367 (672)
T ss_pred             cccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHH
Confidence               4555411                   13455544                     666666655   6899999999


Q ss_pred             hCCCCccccccCCChHHHHHHHcCC----hHHHHHhhhCCCccc--CCCCCCCCCChHHHH---HHHcCC-----c----
Q 039863          347 SCPSSCELVDDRGWNVFHFAAHSGS----RRTVEFLLENPSLGN--LMNEKNYDGNTPLLE---HAVSGS-----F----  408 (563)
Q Consensus       347 ~~~~~~~~~d~~g~t~Lh~A~~~~~----~~iv~~Ll~~~~~~~--~in~~d~~G~TpLh~---A~~~~~-----~----  408 (563)
                      +|++.. . +..|+||||+|+..+.    .+++++|+++   |+  ++|.+|.+|.||||.   |...+.     .    
T Consensus       368 ~GAdIN-~-k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~---Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~  442 (672)
T PHA02730        368 NGATMD-K-TTDNNYPLHDYFVNNNNIVDVNVVRFIVEN---NGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILI  442 (672)
T ss_pred             CCCCCC-c-CCCCCcHHHHHHHHcCCcchHHHHHHHHHc---CCCccccccccCCCchHhHHHHHHhccccccccchhHH
Confidence            998874 3 4799999999998875    8999999998   55  799999999999994   332321     1    


Q ss_pred             -hhhhccCcccCccccccCCCCHHHHHHhcc
Q 039863          409 -IKSFVCHPKVDRLAFNHQNNSAEDIIRSKK  438 (563)
Q Consensus       409 -~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~  438 (563)
                       ++++|+.+|+|++++|..|+|||++|....
T Consensus       443 ~ivk~LIs~GADINakD~~G~TPLh~Aa~~~  473 (672)
T PHA02730        443 DVFDILSKYMDDIDMIDNENKTLLYYAVDVN  473 (672)
T ss_pred             HHHHHHHhcccchhccCCCCCCHHHHHHHhC
Confidence             369999999999999999999999998754


No 18 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.8e-38  Score=324.40  Aligned_cols=324  Identities=19%  Similarity=0.158  Sum_probs=258.6

Q ss_pred             HHHHHHHcCChhhhhhhhhc------cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhh
Q 039863           32 NLYEAAVEGHVGKFEEHKAV------LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIR  105 (563)
Q Consensus        32 ~L~~Aa~~g~~~~v~~Ll~~------~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  105 (563)
                      .|+.+....+.+.+...++.      ..+.....+.||||.|+.                          .|        
T Consensus         3 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~--------------------------~g--------   48 (477)
T PHA02878          3 KLYKSMYTDNYETILKYIEYIDHTENYSTSASLIPFIPLHQAVE--------------------------AR--------   48 (477)
T ss_pred             hHHHHHHhccHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHH--------------------------cC--------
Confidence            45666666665444433433      112234467899999999                          99        


Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV  185 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~  185 (563)
                      +.++|++|++.+.+ ++.++..|.||||+||..|+.++|++|++.+....                  ...+.++|+.|+
T Consensus        49 ~~e~vk~Ll~~gad-vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~------------------~~~~~~~l~~a~  109 (477)
T PHA02878         49 NLDVVKSLLTRGHN-VNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS------------------VFYTLVAIKDAF  109 (477)
T ss_pred             CHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccc------------------cccchhhHHHHH
Confidence            99999999999876 67889999999999999999999999999875421                  145678999999


Q ss_pred             HcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHc--CCHHHHHHHHhcCCCCCCCCCC-CCcHHHHHHhhccccchhh
Q 039863          186 RYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAER--GYKDVMEDILSTCESPVDHGPM-GRTALHAAAFREYTLQTYY  262 (563)
Q Consensus       186 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~-g~t~Lh~A~~~~~~~~~~~  262 (563)
                      ..++.+++++|+..+.......+   ...+......  ...+++++|+++|++++..+.. |.||||.|+..+       
T Consensus       110 ~~~~~ei~~~Ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~-------  179 (477)
T PHA02878        110 NNRNVEIFKIILTNRYKNIQTID---LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENK-------  179 (477)
T ss_pred             HcCCHHHHHHHHhCcccCcccCc---HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCC-------
Confidence            99999999999987543221111   1111111112  2356999999999999999988 999999999999       


Q ss_pred             hhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhc-CCHHHH
Q 039863          263 YFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGK-GRAYTM  341 (563)
Q Consensus       263 ~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v  341 (563)
                           +.+++++|++.  +.+++..|..|.||||.|+..|+.+++++|++.|+++ ..+|..|.||||+|+.. ++.+++
T Consensus       180 -----~~~iv~~Ll~~--gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~~g~TpLh~A~~~~~~~~iv  251 (477)
T PHA02878        180 -----DQRLTELLLSY--GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST-DARDKCGNTPLHISVGYCKDYDIL  251 (477)
T ss_pred             -----CHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhcCCHHHH
Confidence                 99999999997  8899999999999999999999999999999999988 56789999999999975 789999


Q ss_pred             HHHHHhCCCCccccc-cCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC--Cchhhhcc----
Q 039863          342 QELIRSCPSSCELVD-DRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG--SFIKSFVC----  414 (563)
Q Consensus       342 ~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~--~~~~~~l~----  414 (563)
                      ++|+++|.+. +..+ ..|.||||+|  .++.+++++|++.   |+++|.+|..|+||||+|+..+  ..+.++|+    
T Consensus       252 ~~Ll~~gadv-n~~~~~~g~TpLh~A--~~~~~~v~~Ll~~---gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~  325 (477)
T PHA02878        252 KLLLEHGVDV-NAKSYILGLTALHSS--IKSERKLKLLLEY---GADINSLNSYKLTPLSSAVKQYLCINIGRILISNIC  325 (477)
T ss_pred             HHHHHcCCCC-CccCCCCCCCHHHHH--ccCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHH
Confidence            9999998876 4455 4799999999  5778999999999   8999999999999999999864  22334443    


Q ss_pred             -CcccCccccccCCCCHHH
Q 039863          415 -HPKVDRLAFNHQNNSAED  432 (563)
Q Consensus       415 -~~g~d~~~~n~~g~t~l~  432 (563)
                       ..+.+++.++..|..+-.
T Consensus       326 ~~~~~~~~~~~~~g~~~n~  344 (477)
T PHA02878        326 LLKRIKPDIKNSEGFIDNM  344 (477)
T ss_pred             HHHhccCcccCcHHHHHHH
Confidence             445788888888876543


No 19 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.3e-37  Score=320.50  Aligned_cols=277  Identities=19%  Similarity=0.153  Sum_probs=234.2

Q ss_pred             hcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 039863          122 LKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDP  201 (563)
Q Consensus       122 ~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~  201 (563)
                      ...+..+.||||.||..|+.++|++|++.|++++                .++..|.||||+||..|+.+++++|++.+.
T Consensus        31 ~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn----------------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~   94 (477)
T PHA02878         31 TSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVN----------------QPDHRDLTPLHIICKEPNKLGMKEMIRSIN   94 (477)
T ss_pred             CcccccCcchHHHHHHcCCHHHHHHHHHCCCCCC----------------CCCCCCCCHHHHHHHCccHhHHHHHHHHHh
Confidence            4456678999999999999999999999998854                488999999999999999999999999865


Q ss_pred             CCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCC
Q 039863          202 NLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKG  281 (563)
Q Consensus       202 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~  281 (563)
                      ....   ..+.+|++.|+..++.+++++|+..+.+.....  ....+......+          ....+++++|++.  +
T Consensus        95 ~~~~---~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~--~~~~~~~~~~~~----------~~~~~iv~~Ll~~--g  157 (477)
T PHA02878         95 KCSV---FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTI--DLVYIDKKSKDD----------IIEAEITKLLLSY--G  157 (477)
T ss_pred             cccc---ccchhhHHHHHHcCCHHHHHHHHhCcccCcccC--cHHHHhhccchh----------hHHHHHHHHHHHc--C
Confidence            5432   467899999999999999999998754322110  000111111111          0035699999997  9


Q ss_pred             CCCccCCCC-CCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCC
Q 039863          282 TQTTKPDQQ-GWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGW  360 (563)
Q Consensus       282 ~~~~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~  360 (563)
                      .+++..+.. |.||||+|+..|+.+++++|++.|+++ +..+..|.||||.|+..|+.++++.|++.+++. +.+|..|+
T Consensus       158 adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~~g~  235 (477)
T PHA02878        158 ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV-NIPDKTNNSPLHHAVKHYNKPIVHILLENGAST-DARDKCGN  235 (477)
T ss_pred             CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCCCCC
Confidence            999999998 999999999999999999999999988 567899999999999999999999999998776 77899999


Q ss_pred             hHHHHHHHc-CChHHHHHhhhCCCcccCCCCCCC-CCChHHHHHHHcCCchhhhccCcccCccccccCCCCHHHHHHhc
Q 039863          361 NVFHFAAHS-GSRRTVEFLLENPSLGNLMNEKNY-DGNTPLLEHAVSGSFIKSFVCHPKVDRLAFNHQNNSAEDIIRSK  437 (563)
Q Consensus       361 t~Lh~A~~~-~~~~iv~~Ll~~~~~~~~in~~d~-~G~TpLh~A~~~~~~~~~~l~~~g~d~~~~n~~g~t~l~~a~~~  437 (563)
                      ||||+|+.. ++.+++++|++.   |+++|.++. .|+||||+|+ ....++++|++.|+|+++.|..|.||+++|...
T Consensus       236 TpLh~A~~~~~~~~iv~~Ll~~---gadvn~~~~~~g~TpLh~A~-~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~  310 (477)
T PHA02878        236 TPLHISVGYCKDYDILKLLLEH---GVDVNAKSYILGLTALHSSI-KSERKLKLLLEYGADINSLNSYKLTPLSSAVKQ  310 (477)
T ss_pred             CHHHHHHHhcCCHHHHHHHHHc---CCCCCccCCCCCCCHHHHHc-cCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHH
Confidence            999999976 689999999999   899999986 8999999994 334567999999999999999999999999863


No 20 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.5e-37  Score=323.89  Aligned_cols=282  Identities=22%  Similarity=0.228  Sum_probs=246.2

Q ss_pred             CChhhhhhhhhc--cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhC
Q 039863           40 GHVGKFEEHKAV--LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVRVILEMC  117 (563)
Q Consensus        40 g~~~~v~~Ll~~--~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~  117 (563)
                      ...+.++++++.  ..+..+..+.||||.|+.                          .|        +.+++++|++.+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~--------------------------~~--------~~~ivk~Ll~~g   58 (480)
T PHA03100         13 IKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKE--------------------------AR--------NIDVVKILLDNG   58 (480)
T ss_pred             HHHHHHHHHHhcCccchhhhcccchhhhhhhc--------------------------cC--------CHHHHHHHHHcC
Confidence            344566666665  233367788999999999                          99        999999999988


Q ss_pred             chhhhcccCCCCcHHHH-----HHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH--HcCCH
Q 039863          118 PILLLKANAKGETLLHI-----AARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV--RYNQV  190 (563)
Q Consensus       118 ~~~l~~~~~~g~t~Lh~-----A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~--~~g~~  190 (563)
                      .+ ++..+..+.||||+     |+..|+.++|++|++.|+++.                ..+..|.||||+|+  ..|+.
T Consensus        59 ~~-~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~----------------~~d~~g~tpL~~A~~~~~~~~  121 (480)
T PHA03100         59 AD-INSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVN----------------APDNNGITPLLYAISKKSNSY  121 (480)
T ss_pred             CC-CCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCC----------------CCCCCCCchhhHHHhcccChH
Confidence            76 56778888999999     999999999999999998853                47888999999999  99999


Q ss_pred             HHHHHHHhcCCCCccccCcCCCcHHHHHHHcC--CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhccc
Q 039863          191 DVVKMLTKEDPNLSYDANEAGETPLYLAAERG--YKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKD  268 (563)
Q Consensus       191 ~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~  268 (563)
                      +++++|++.|+++. ..+..|.||||+|+..|  +.+++++|+++|++++..+..|.||||.|+..+            +
T Consensus       122 ~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~------------~  188 (480)
T PHA03100        122 SIVEYLLDNGANVN-IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKG------------N  188 (480)
T ss_pred             HHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhC------------C
Confidence            99999999998876 47788999999999999  899999999999999988889999999999999            9


Q ss_pred             HHHHHHHHhccCCCCCccCCCCC------CCHHHHHHHcCC--hHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHH
Q 039863          269 REIIKVLLRSSKGTQTTKPDQQG------WLPLHLAAHLGN--YYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYT  340 (563)
Q Consensus       269 ~~~~~~Ll~~~~~~~~~~~d~~g------~tpLh~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~  340 (563)
                      .+++++|++.  +.+++..+..|      .||||.|+..|+  .+++++|++.|+++ +.+|..|.||||+|+..|+.++
T Consensus       189 ~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~TpL~~A~~~~~~~i  265 (480)
T PHA03100        189 IDVIKFLLDN--GADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI-NIKDVYGFTPLHYAVYNNNPEF  265 (480)
T ss_pred             HHHHHHHHHc--CCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHH
Confidence            9999999997  88888888888      899999999999  99999999999887 5568899999999999999999


Q ss_pred             HHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCC
Q 039863          341 MQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKN  392 (563)
Q Consensus       341 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d  392 (563)
                      +++|++.|++ ++.+|..|.||||+|+.+++.+++++|++.   |++++..+
T Consensus       266 v~~Ll~~gad-~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~---g~~i~~i~  313 (480)
T PHA03100        266 VKYLLDLGAN-PNLVNKYGDTPLHIAILNNNKEIFKLLLNN---GPSIKTII  313 (480)
T ss_pred             HHHHHHcCCC-CCccCCCCCcHHHHHHHhCCHHHHHHHHhc---CCCHHHHH
Confidence            9999999885 478899999999999999999999999998   66766544


No 21 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.5e-36  Score=318.87  Aligned_cols=342  Identities=15%  Similarity=0.083  Sum_probs=254.4

Q ss_pred             hhhhhhhhhcc--ccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhCch
Q 039863           42 VGKFEEHKAVL--HQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVRVILEMCPI  119 (563)
Q Consensus        42 ~~~v~~Ll~~~--~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~  119 (563)
                      ++.+++|+..+  ++.+|.+|+||||+||.                       +..+|        +.+++++|++.+.+
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~-----------------------~~~~~--------~~~~v~~Ll~~ga~   60 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLF-----------------------NEHCN--------NVEVVKLLLDSGTN   60 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHH-----------------------hhhcC--------cHHHHHHHHHCCCC
Confidence            56778888663  33368899999999865                       00147        89999999999987


Q ss_pred             hhhcccCCCCcHHHHHHHcCcHH----HHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHH
Q 039863          120 LLLKANAKGETLLHIAARHGHYD----IVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKM  195 (563)
Q Consensus       120 ~l~~~~~~g~t~Lh~A~~~g~~~----iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~  195 (563)
                       ++..+..|.||||.|+..|+.+    +|+.|++.+...+.                .+  ..+++|+|+.+|+.++|++
T Consensus        61 -v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~----------------~~--~~~~~~~a~~~~~~e~vk~  121 (661)
T PHA02917         61 -PLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNI----------------ND--FNIFSYMKSKNVDVDLIKV  121 (661)
T ss_pred             -ccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCC----------------CC--cchHHHHHhhcCCHHHHHH
Confidence             5678999999999999999955    55677765433211                11  2367888999999999999


Q ss_pred             HHhcCCCCccccCcCCCcHHHHHH--HcCCHHHHHHHHhcCCCCCCCCC---CC-----------CcHHHHHHhhccccc
Q 039863          196 LTKEDPNLSYDANEAGETPLYLAA--ERGYKDVMEDILSTCESPVDHGP---MG-----------RTALHAAAFREYTLQ  259 (563)
Q Consensus       196 Ll~~~~~~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~~~~~~~~~~---~g-----------~t~Lh~A~~~~~~~~  259 (563)
                      |++.|.+++ ..+..|.|||+.|+  ..|+.+++++|+++|++++..+.   .|           .||||+|+..+....
T Consensus       122 Ll~~Gadin-~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~  200 (661)
T PHA02917        122 LVEHGFDLS-VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSE  200 (661)
T ss_pred             HHHcCCCCC-ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhccccc
Confidence            999999998 47889999999654  57899999999999999875442   33           599999986210000


Q ss_pred             hhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCCh--HHHHHHHhcCCCCC---ccCCCCCChHHHHHHh
Q 039863          260 TYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNY--YVVKELLKADISAA---YKPDNEGKIPLHLAAG  334 (563)
Q Consensus       260 ~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~--~~v~~Ll~~~~~~~---~~~~~~g~tpL~~A~~  334 (563)
                      .. ..-..+.+++++|++.  +.+++..|.+|.||||+|+..|+.  ++|++|++ |++..   ...+..|.+|+|+|+.
T Consensus       201 ~~-~~~~~~~eiv~~Li~~--Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~y  276 (661)
T PHA02917        201 SD-TRAYVRPEVVKCLINH--GIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADY  276 (661)
T ss_pred             cc-ccccCcHHHHHHHHHC--CCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHH
Confidence            00 0000178999999997  999999999999999999999985  79999986 66543   2456678889999984


Q ss_pred             c---------CCHHHHHHHHHhCCCCcc------cc------------ccCCChHHHHHH---HcCC--hHHHHHhhhCC
Q 039863          335 K---------GRAYTMQELIRSCPSSCE------LV------------DDRGWNVFHFAA---HSGS--RRTVEFLLENP  382 (563)
Q Consensus       335 ~---------g~~~~v~~Ll~~~~~~~~------~~------------d~~g~t~Lh~A~---~~~~--~~iv~~Ll~~~  382 (563)
                      .         .+.++++.|++.|.+...      ..            ...+.+++|.+.   ..|.  .+++++|++.+
T Consensus       277 l~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~G  356 (661)
T PHA02917        277 LNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYG  356 (661)
T ss_pred             HHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcC
Confidence            2         267999999999865311      01            112344545443   3565  45888888873


Q ss_pred             C---------------------------cccCCCCCCCCCChHHHHHHHcCC------------------------chhh
Q 039863          383 S---------------------------LGNLMNEKNYDGNTPLLEHAVSGS------------------------FIKS  411 (563)
Q Consensus       383 ~---------------------------~~~~in~~d~~G~TpLh~A~~~~~------------------------~~~~  411 (563)
                      .                           .|++++..|.+|+||||.|++.+.                        .+++
T Consensus       357 Advn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  436 (661)
T PHA02917        357 AVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTIN  436 (661)
T ss_pred             CCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHH
Confidence            2                           245566667789999999985432                        1348


Q ss_pred             hccCcccCccccccCCCCHHHHHHhcc
Q 039863          412 FVCHPKVDRLAFNHQNNSAEDIIRSKK  438 (563)
Q Consensus       412 ~l~~~g~d~~~~n~~g~t~l~~a~~~~  438 (563)
                      +|+.+|+|++.+|..|+||||+|....
T Consensus       437 ~Ll~~GAdIN~kd~~G~TpLh~Aa~~~  463 (661)
T PHA02917        437 ICLPYLKDINMIDKRGETLLHKAVRYN  463 (661)
T ss_pred             HHHHCCCCCCCCCCCCcCHHHHHHHcC
Confidence            899999999999999999999998654


No 22 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=2.4e-38  Score=334.65  Aligned_cols=381  Identities=25%  Similarity=0.308  Sum_probs=314.3

Q ss_pred             HHHHHHHhhhhhhchhhHHHHHHHHHcCChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCC--------CCCcc
Q 039863           13 ETRRERLRSVREKNIQLMDNLYEAAVEGHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMK--------PNNKA   82 (563)
Q Consensus        13 ~~~~~~l~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~--------~~~~~   82 (563)
                      +.+.+.....+-.+..+.||+|.||..+.++++++|++.+++.  ......||+|+|...+.....+        ++...
T Consensus       259 ~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar  338 (1143)
T KOG4177|consen  259 KLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAAR  338 (1143)
T ss_pred             HHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccC
Confidence            3344444457777888888999999999999999999996555  6667788888888833221111        11111


Q ss_pred             chhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchh
Q 039863           83 NSLWRMISTFKKQSSSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEG  162 (563)
Q Consensus        83 ~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~  162 (563)
                      ..-. .-.+...+.|        +.+++.++...++. -......|.||+|.|+..|..++|++++..|++++       
T Consensus       339 ~~g~-t~lHlaa~~~--------~~~~~~~l~~~~~~-~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~-------  401 (1143)
T KOG4177|consen  339 TAGY-TPLHLAAKEG--------QVEVAGALLEHGAQ-RRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPN-------  401 (1143)
T ss_pred             cCCc-ccccHhhhhh--------hHHHHHHhhccccc-cCcccccCCcchhhhcccCchhHHHhhhhccCCcc-------
Confidence            1100 1112222244        55555555555444 33456677888888888888888888888887744       


Q ss_pred             HHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcC-CHHHHHHHHhcCCCCCCCC
Q 039863          163 VAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERG-YKDVMEDILSTCESPVDHG  241 (563)
Q Consensus       163 ~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g-~~~~v~~Ll~~~~~~~~~~  241 (563)
                               .++..|.||||.|+..++.++|+.+++.+.+.. ..+..|.||+|+|+..| ..+++..+++.+.+++...
T Consensus       402 ---------~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~-~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s  471 (1143)
T KOG4177|consen  402 ---------SAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPN-AKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVS  471 (1143)
T ss_pred             ---------cCCCCCcceeeehhhccCcceEEEEeccCCChh-hHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhc
Confidence                     489999999999999999999999999998877 47888999999999999 8999999999999999999


Q ss_pred             CCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccC
Q 039863          242 PMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKP  321 (563)
Q Consensus       242 ~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~  321 (563)
                      ..|.||||.|...|            +.+++..|++.  ....+.....+.+++|.+...+....++.++++|+.. ..+
T Consensus       472 ~~G~T~Lhlaaq~G------------h~~~~~llle~--~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v-~~~  536 (1143)
T KOG4177|consen  472 KQGFTPLHLAAQEG------------HTEVVQLLLEG--GANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANV-DLR  536 (1143)
T ss_pred             cccCcchhhhhccC------------CchHHHHhhhc--CCccCccchhccchhhhhhhhhhHHHHHHHhhcCCce-ehh
Confidence            99999999999999            99999999986  6677777888999999999999999999999999988 667


Q ss_pred             CCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHH
Q 039863          322 DNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLE  401 (563)
Q Consensus       322 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~  401 (563)
                      +..|.||||.|+..|+..+|++|++++.+. +.+++.|+||||.|+..|+.+|+.+|+++   |+++|..|.+|.||||+
T Consensus       537 ~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv-~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~---GA~vna~d~~g~TpL~i  612 (1143)
T KOG4177|consen  537 TGRGYTPLHVAVHYGNVDLVKFLLEHGADV-NAKDKLGYTPLHQAAQQGHNDIAELLLKH---GASVNAADLDGFTPLHI  612 (1143)
T ss_pred             cccccchHHHHHhcCCchHHHHhhhCCccc-cccCCCCCChhhHHHHcChHHHHHHHHHc---CCCCCcccccCcchhHH
Confidence            889999999999999999999999999887 66889999999999999999999999999   99999999999999999


Q ss_pred             HHHcCCc-hhhhccCcccC-----ccccccCCCCHHHHHHhccc
Q 039863          402 HAVSGSF-IKSFVCHPKVD-----RLAFNHQNNSAEDIIRSKKV  439 (563)
Q Consensus       402 A~~~~~~-~~~~l~~~g~d-----~~~~n~~g~t~l~~a~~~~~  439 (563)
                      |+..+.. ++++|+..+++     ....++.|.+|.++......
T Consensus       613 A~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~~  656 (1143)
T KOG4177|consen  613 AVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEELDT  656 (1143)
T ss_pred             HHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHHhhh
Confidence            9999954 56888888888     88999999999999886543


No 23 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=6.1e-36  Score=279.73  Aligned_cols=214  Identities=27%  Similarity=0.346  Sum_probs=185.3

Q ss_pred             HHHHHHcCChhhhhhhhhcccc--c-----cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhh
Q 039863           33 LYEAAVEGHVGKFEEHKAVLHQ--I-----LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIR  105 (563)
Q Consensus        33 L~~Aa~~g~~~~v~~Ll~~~~~--~-----~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  105 (563)
                      .+.|++.|.+..+..|+-+.-+  +     ...+|.|||-+||+                          +|        
T Consensus         8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaR--------------------------nG--------   53 (615)
T KOG0508|consen    8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAAR--------------------------NG--------   53 (615)
T ss_pred             HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehh--------------------------cC--------
Confidence            4488999999888877765111  1     56678899999999                          99        


Q ss_pred             hhhHHHHHHHhCchhhh--------cccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCC
Q 039863          106 GENFVRVILEMCPILLL--------KANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAK  177 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~--------~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  177 (563)
                      |.++|+||++++.....        --+..|-+||..|+..||.++|+.|++.|++.+.                .....
T Consensus        54 H~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~----------------tT~TN  117 (615)
T KOG0508|consen   54 HADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVND----------------TTRTN  117 (615)
T ss_pred             cHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccc----------------ccccC
Confidence            99999999986644332        2346688999999999999999999999987543                44556


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccc
Q 039863          178 DTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYT  257 (563)
Q Consensus       178 ~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~  257 (563)
                      .|||-.||..|+.++|++|+++++++. ..|..|.|.|++||..|+.+++++|++.|++++.++..|+|+||.|+..|  
T Consensus       118 StPLraACfDG~leivKyLvE~gad~~-IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG--  194 (615)
T KOG0508|consen  118 STPLRAACFDGHLEIVKYLVEHGADPE-IANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESG--  194 (615)
T ss_pred             CccHHHHHhcchhHHHHHHHHcCCCCc-ccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcc--
Confidence            699999999999999999999999988 58999999999999999999999999999999999999999999999999  


Q ss_pred             cchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHh
Q 039863          258 LQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLK  312 (563)
Q Consensus       258 ~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~  312 (563)
                                +.+++++|+.+  +..+. .|..|.|||..|+..|+.++|..|++
T Consensus       195 ----------~vdivq~Ll~~--ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  195 ----------SVDIVQLLLKH--GAKID-VDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             ----------cHHHHHHHHhC--Cceee-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence                      99999999987  44433 46679999999999999999998885


No 24 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.7e-35  Score=302.89  Aligned_cols=277  Identities=18%  Similarity=0.214  Sum_probs=234.0

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHc--CcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARH--GHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHE  183 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~--g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~  183 (563)
                      +.+++++|++.|.+ ++.. ..|.||||.++..  ++.++|++|+++|++++.                ++ .+.||||.
T Consensus        15 ~~~~v~~LL~~Gad-vN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~----------------~~-~~~tpL~~   75 (494)
T PHA02989         15 DKNALEFLLRTGFD-VNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNY----------------KG-YIETPLCA   75 (494)
T ss_pred             cHHHHHHHHHcCCC-cccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccC----------------CC-CCCCcHHH
Confidence            89999999999988 5555 5689999876654  479999999999998653                33 46899999


Q ss_pred             HHHcC------CHHHHHHHHhcCCCCccccCcCCCcHHHHHHHc---CCHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHh
Q 039863          184 AVRYN------QVDVVKMLTKEDPNLSYDANEAGETPLYLAAER---GYKDVMEDILSTCESP-VDHGPMGRTALHAAAF  253 (563)
Q Consensus       184 A~~~g------~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~-~~~~~~g~t~Lh~A~~  253 (563)
                      |+.++      +.+++++|++.|++++ ..+..|.|||+.|+..   ++.+++++|+++|+++ +..+..|.||||.|+.
T Consensus        76 a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~  154 (494)
T PHA02989         76 VLRNREITSNKIKKIVKLLLKFGADIN-LKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLE  154 (494)
T ss_pred             HHhccCcchhhHHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHH
Confidence            98754      5789999999999988 4788899999988765   6799999999999999 7899999999999876


Q ss_pred             hccccchhhhhhcccHHHHHHHHhccCCCCCcc-CCCCCCCHHHHHHHcC----ChHHHHHHHhcCCCCCccCCCCCChH
Q 039863          254 REYTLQTYYYFFRKDREIIKVLLRSSKGTQTTK-PDQQGWLPLHLAAHLG----NYYVVKELLKADISAAYKPDNEGKIP  328 (563)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~-~d~~g~tpLh~A~~~g----~~~~v~~Ll~~~~~~~~~~~~~g~tp  328 (563)
                      ....          +.+++++|++.  +.+++. .+..|.||||.|+..+    +.+++++|++.|+++ ...+..+.+|
T Consensus       155 ~~~~----------~~~iv~~Ll~~--Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v-n~~~~~~~t~  221 (494)
T PHA02989        155 SFSV----------KKDVIKILLSF--GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI-ETNNNGSESV  221 (494)
T ss_pred             hccC----------CHHHHHHHHHc--CCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCc-cccCCccccH
Confidence            5311          78999999997  888887 6789999999998764    899999999999988 4557789999


Q ss_pred             HHHHHhc------CCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHH
Q 039863          329 LHLAAGK------GRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEH  402 (563)
Q Consensus       329 L~~A~~~------g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A  402 (563)
                      ||.++..      +..+++++|+. + ..++.+|..|+||||+|+..++.+++++|++.   |+++|.+|..|+||||+|
T Consensus       222 l~~~~~~~~~~~~~~~~il~~l~~-~-advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~---Gadin~~d~~G~TpL~~A  296 (494)
T PHA02989        222 LESFLDNNKILSKKEFKVLNFILK-Y-IKINKKDKKGFNPLLISAKVDNYEAFNYLLKL---GDDIYNVSKDGDTVLTYA  296 (494)
T ss_pred             HHHHHHhchhhcccchHHHHHHHh-C-CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHc---CCCccccCCCCCCHHHHH
Confidence            9987654      35677887665 4 45588999999999999999999999999999   899999999999999999


Q ss_pred             HHcCCc-hhhhccCcccCc
Q 039863          403 AVSGSF-IKSFVCHPKVDR  420 (563)
Q Consensus       403 ~~~~~~-~~~~l~~~g~d~  420 (563)
                      +..+.. ++++|++.+...
T Consensus       297 ~~~~~~~iv~~LL~~~p~~  315 (494)
T PHA02989        297 IKHGNIDMLNRILQLKPGK  315 (494)
T ss_pred             HHcCCHHHHHHHHhcCCCh
Confidence            999854 557777766543


No 25 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=5e-35  Score=275.75  Aligned_cols=235  Identities=17%  Similarity=0.119  Sum_probs=195.8

Q ss_pred             cCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHH
Q 039863          138 HGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYL  217 (563)
Q Consensus       138 ~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~  217 (563)
                      .++.+++++|++.++.                  .+|..|.||||+|+..|+.+++++|++.+++...   ..+.||||+
T Consensus         9 ~~~~~~~~~Lis~~a~------------------~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~---~d~~TpLh~   67 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF------------------KADVHGHSALYYAIADNNVRLVCTLLNAGALKNL---LENEFPLHQ   67 (284)
T ss_pred             cCHHHHHHHHHhCCCC------------------CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC---CCCCCHHHH
Confidence            5788999999998764                  3678899999999999999999999999887653   246899999


Q ss_pred             HHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCC-CHHH
Q 039863          218 AAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGW-LPLH  296 (563)
Q Consensus       218 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~-tpLh  296 (563)
                      |+..|+.+++++|++.|++++..+..|+||||+|+..+            +.+++++|++.  +.+++..+..|+ ||||
T Consensus        68 Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g------------~~eivk~Ll~~--gadin~~~~~g~~TpL~  133 (284)
T PHA02791         68 AATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSG------------NMQTVKLFVKK--NWRLMFYGKTGWKTSFY  133 (284)
T ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------------CHHHHHHHHHC--CCCcCccCCCCCcHHHH
Confidence            99999999999999999999889999999999999998            89999999986  777887887775 8999


Q ss_pred             HHHHcCChHHHHHHHhcCCCCCccCC-CCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChH-HHHHHHcCChHH
Q 039863          297 LAAHLGNYYVVKELLKADISAAYKPD-NEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNV-FHFAAHSGSRRT  374 (563)
Q Consensus       297 ~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~~~~~i  374 (563)
                      +|+..|+.+++++|++.++..   .+ ..|.||||+|+..|+.++++.|++++++. +..|..|.|| ||+|+.+++.++
T Consensus       134 ~Aa~~g~~eivk~LL~~~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~-n~~d~~g~t~~L~~Aa~~~~~e~  209 (284)
T PHA02791        134 HAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAIDNKDLEM  209 (284)
T ss_pred             HHHHcCCHHHHHHHHhcCCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CcccCCCCChHHHHHHHcCCHHH
Confidence            999999999999999876544   22 35789999999999999999999988765 6678888876 999999999999


Q ss_pred             HHHhhhCCCcccCCCCCCCCCChHHHHHHHcCCchhhhccCcccCc
Q 039863          375 VEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGSFIKSFVCHPKVDR  420 (563)
Q Consensus       375 v~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~~~~~~l~~~g~d~  420 (563)
                      +++|+++   |+++|.+|.+| |||+.|     .++++|+++.++.
T Consensus       210 v~lLl~~---Ga~in~~~~~~-~~l~~~-----e~~~~ll~~~~~~  246 (284)
T PHA02791        210 LQALFKY---DINIYSVNLEN-VLLDDA-----EIAKMIIEKHVEY  246 (284)
T ss_pred             HHHHHHC---CCCCccCcccC-ccCCCH-----HHHHHHHHhhhhh
Confidence            9999988   88999999854 777333     3667777766554


No 26 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.5e-35  Score=276.78  Aligned_cols=229  Identities=18%  Similarity=0.190  Sum_probs=192.4

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV  185 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~  185 (563)
                      +.+++++|+++++.   ..|..|.||||+|+..|+.++|++|++.|++...                .  +|.||||+|+
T Consensus        11 ~~~~~~~Lis~~a~---~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~----------------~--d~~TpLh~Aa   69 (284)
T PHA02791         11 SKQLKSFLSSKDAF---KADVHGHSALYYAIADNNVRLVCTLLNAGALKNL----------------L--ENEFPLHQAA   69 (284)
T ss_pred             HHHHHHHHHhCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC----------------C--CCCCHHHHHH
Confidence            88899999987764   5788899999999999999999999999876432                2  3679999999


Q ss_pred             HcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-cHHHHHHhhccccchhhhh
Q 039863          186 RYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGR-TALHAAAFREYTLQTYYYF  264 (563)
Q Consensus       186 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~-t~Lh~A~~~~~~~~~~~~~  264 (563)
                      ..|+.+++++|++.|+++. ..|..|.||||+|+..|+.+++++|++.+++++..+..|. ||||.|+..+         
T Consensus        70 ~~g~~eiV~lLL~~Gadvn-~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g---------  139 (284)
T PHA02791         70 TLEDTKIVKILLFSGMDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN---------  139 (284)
T ss_pred             HCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcC---------
Confidence            9999999999999988876 4788899999999999999999999999999888887774 8999999998         


Q ss_pred             hcccHHHHHHHHhccCCCCCccCC-CCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChH-HHHHHhcCCHHHHH
Q 039863          265 FRKDREIIKVLLRSSKGTQTTKPD-QQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIP-LHLAAGKGRAYTMQ  342 (563)
Q Consensus       265 ~~~~~~~~~~Ll~~~~~~~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tp-L~~A~~~g~~~~v~  342 (563)
                         +.+++++|++.  +...  .| ..|.||||+|+..|+.+++++|++.|+++ +.++..|.|| ||+|+..|+.++++
T Consensus       140 ---~~eivk~LL~~--~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~-n~~d~~g~t~~L~~Aa~~~~~e~v~  211 (284)
T PHA02791        140 ---DVSIVSYFLSE--IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAIDNKDLEMLQ  211 (284)
T ss_pred             ---CHHHHHHHHhc--CCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CcccCCCCChHHHHHHHcCCHHHHH
Confidence               89999999986  2211  22 25789999999999999999999999887 4567788876 99999999999999


Q ss_pred             HHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhC
Q 039863          343 ELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLEN  381 (563)
Q Consensus       343 ~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  381 (563)
                      .|+++|.+. +..|..| ++|      ++.|++++|+++
T Consensus       212 lLl~~Ga~i-n~~~~~~-~~l------~~~e~~~~ll~~  242 (284)
T PHA02791        212 ALFKYDINI-YSVNLEN-VLL------DDAEIAKMIIEK  242 (284)
T ss_pred             HHHHCCCCC-ccCcccC-ccC------CCHHHHHHHHHh
Confidence            999998776 6677754 555      778999999987


No 27 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.4e-34  Score=297.60  Aligned_cols=281  Identities=18%  Similarity=0.133  Sum_probs=236.7

Q ss_pred             HcCChhhhhhhhhccccccC-CCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHh
Q 039863           38 VEGHVGKFEEHKAVLHQILT-PNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVRVILEM  116 (563)
Q Consensus        38 ~~g~~~~v~~Ll~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~  116 (563)
                      ...+++++++|++.|+++.. ..|.||||.++..                        ..+        +.++|++|++.
T Consensus        12 ~~~~~~~v~~LL~~GadvN~~~~g~t~l~~~~~~------------------------~~~--------~~~iv~~Ll~~   59 (494)
T PHA02989         12 DTVDKNALEFLLRTGFDVNEEYRGNSILLLYLKR------------------------KDV--------KIKIVKLLIDN   59 (494)
T ss_pred             CcCcHHHHHHHHHcCCCcccccCCCCHHHHHHhc------------------------CCC--------ChHHHHHHHHc
Confidence            35889999999999777622 5689998765540                        035        68999999999


Q ss_pred             CchhhhcccCCCCcHHHHHHHcC------cHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHc---
Q 039863          117 CPILLLKANAKGETLLHIAARHG------HYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRY---  187 (563)
Q Consensus       117 ~~~~l~~~~~~g~t~Lh~A~~~g------~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~---  187 (563)
                      |++ ++.++ .+.||||.|+.++      +.++|++|+++|++++                .++..|.||||.|+..   
T Consensus        60 GAd-vn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin----------------~~d~~g~tpL~~a~~~~~~  121 (494)
T PHA02989         60 GAD-VNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADIN----------------LKTFNGVSPIVCFIYNSNI  121 (494)
T ss_pred             CCC-ccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCC----------------CCCCCCCcHHHHHHHhccc
Confidence            988 45444 5789999998754      5789999999999854                4888999999988765   


Q ss_pred             CCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHc--CCHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHhhccccchhhhh
Q 039863          188 NQVDVVKMLTKEDPNLSYDANEAGETPLYLAAER--GYKDVMEDILSTCESPVD-HGPMGRTALHAAAFREYTLQTYYYF  264 (563)
Q Consensus       188 g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~--g~~~~v~~Ll~~~~~~~~-~~~~g~t~Lh~A~~~~~~~~~~~~~  264 (563)
                      |+.+++++|+++|++++...+..|.||||+|+..  ++.+++++|+++|++++. .+..|.||||.|+..+..       
T Consensus       122 ~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~-------  194 (494)
T PHA02989        122 NNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDID-------  194 (494)
T ss_pred             CcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccc-------
Confidence            6799999999999998446888999999998765  689999999999999987 678999999999865411       


Q ss_pred             hcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHc------CChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCH
Q 039863          265 FRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHL------GNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRA  338 (563)
Q Consensus       265 ~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~------g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~  338 (563)
                       ..+.+++++|++.  |.+++..+..+.+|||.++..      +..+++++|+. ++++ +.+|..|+||||+|+..|+.
T Consensus       195 -~~~~~iv~~Ll~~--Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~adv-n~~d~~G~TpL~~Aa~~~~~  269 (494)
T PHA02989        195 -VISIKVIKYLIKK--GVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKI-NKKDKKGFNPLLISAKVDNY  269 (494)
T ss_pred             -cccHHHHHHHHhC--CCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCC-CCCCCCCCCHHHHHHHhcCH
Confidence             1278999999997  899999999999999987754      35677887765 5666 66789999999999999999


Q ss_pred             HHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhC
Q 039863          339 YTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLEN  381 (563)
Q Consensus       339 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  381 (563)
                      +++++|++.|.+. +.+|..|+||||+|+..++.+++++|++.
T Consensus       270 ~~v~~LL~~Gadi-n~~d~~G~TpL~~A~~~~~~~iv~~LL~~  311 (494)
T PHA02989        270 EAFNYLLKLGDDI-YNVSKDGDTVLTYAIKHGNIDMLNRILQL  311 (494)
T ss_pred             HHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            9999999998876 77899999999999999999999999987


No 28 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1e-33  Score=288.65  Aligned_cols=243  Identities=21%  Similarity=0.229  Sum_probs=218.0

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcccc
Q 039863          128 GETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDA  207 (563)
Q Consensus       128 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~  207 (563)
                      .+++||.|+..|+.++|++|++.|++++.                .+..|.||||+|+..|+.+++++|++.|.+.. ..
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~----------------~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~   64 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNF----------------EIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD-VK   64 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCc----------------cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cc
Confidence            57899999999999999999999988543                67789999999999999999999999998765 35


Q ss_pred             CcCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCcc
Q 039863          208 NEAGETPLYLAAERGYKDVMEDILSTCESPV-DHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTK  286 (563)
Q Consensus       208 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~  286 (563)
                      +..+.||||.|+..|+.+++++|++.++... ..+..|.||||.|+..+            +.+++++|++.  +.+++.
T Consensus        65 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~------------~~~iv~~Ll~~--gad~~~  130 (413)
T PHA02875         65 YPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILK------------KLDIMKLLIAR--GADPDI  130 (413)
T ss_pred             CCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhC------------CHHHHHHHHhC--CCCCCC
Confidence            6778999999999999999999999997654 45678999999999999            99999999997  899999


Q ss_pred             CCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCC-ChHHHH
Q 039863          287 PDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRG-WNVFHF  365 (563)
Q Consensus       287 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g-~t~Lh~  365 (563)
                      .+..|.||||+|+..|+.+++++|++.|+++ ...|..|.||||+|+..|+.+++++|++.|++. +..+..| .||+|+
T Consensus       131 ~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~-n~~~~~~~~t~l~~  208 (413)
T PHA02875        131 PNTDKFSPLHLAVMMGDIKGIELLIDHKACL-DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI-DYFGKNGCVAALCY  208 (413)
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CcCCCCCCchHHHH
Confidence            9999999999999999999999999999887 566899999999999999999999999999887 4566665 589999


Q ss_pred             HHHcCChHHHHHhhhCCCcccCCCCC---CCCCChHHHHHHHcC
Q 039863          366 AAHSGSRRTVEFLLENPSLGNLMNEK---NYDGNTPLLEHAVSG  406 (563)
Q Consensus       366 A~~~~~~~iv~~Ll~~~~~~~~in~~---d~~G~TpLh~A~~~~  406 (563)
                      |+..++.+++++|+++   |+++|..   +.+|.|||+++....
T Consensus       209 A~~~~~~~iv~~Ll~~---gad~n~~~~~~~~~~t~l~~~~~~~  249 (413)
T PHA02875        209 AIENNKIDIVRLFIKR---GADCNIMFMIEGEECTILDMICNMC  249 (413)
T ss_pred             HHHcCCHHHHHHHHHC---CcCcchHhhcCCCchHHHHHHHhhc
Confidence            9999999999999999   7777764   778999999887543


No 29 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=4.2e-35  Score=240.08  Aligned_cols=207  Identities=29%  Similarity=0.353  Sum_probs=162.3

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCC-CCCCCCC-CCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCC
Q 039863          212 ETPLYLAAERGYKDVMEDILSTCE-SPVDHGP-MGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQ  289 (563)
Q Consensus       212 ~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~-~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~  289 (563)
                      .++.+.+++.....-++.+++..+ +.+.++. +|+||||+||..|            +.+++.+|+.. .+..++..|.
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g------------~~eiv~fLlsq-~nv~~ddkDd   70 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFG------------HVEIVYFLLSQ-PNVKPDDKDD   70 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecC------------chhHHHHHHhc-CCCCCCCccc
Confidence            345555555555555555555544 4444433 6777777777777            77777777764 5677777788


Q ss_pred             CCCCHHHHHHHcCChHHHHHHHhc-CCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHH
Q 039863          290 QGWLPLHLAAHLGNYYVVKELLKA-DISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAH  368 (563)
Q Consensus       290 ~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~  368 (563)
                      .||||||.|+..|+.++|+.|+.+ ++++ +..++.|.|+||+|+..|+.+++++|++++.. +...|..|.||||-|+.
T Consensus        71 aGWtPlhia~s~g~~evVk~Ll~r~~adv-na~tn~G~T~LHyAagK~r~eIaqlLle~ga~-i~~kD~~~qtplHRAAa  148 (226)
T KOG4412|consen   71 AGWTPLHIAASNGNDEVVKELLNRSGADV-NATTNGGQTCLHYAAGKGRLEIAQLLLEKGAL-IRIKDKQGQTPLHRAAA  148 (226)
T ss_pred             cCCchhhhhhhcCcHHHHHHHhcCCCCCc-ceecCCCcceehhhhcCChhhHHHHHHhcCCC-CcccccccCchhHHHHh
Confidence            899999999999999999999887 6666 66788899999999999999999999988844 47789999999999999


Q ss_pred             cCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC-CchhhhccCcccCccccccCCCCHHHHHHhc
Q 039863          369 SGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG-SFIKSFVCHPKVDRLAFNHQNNSAEDIIRSK  437 (563)
Q Consensus       369 ~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~-~~~~~~l~~~g~d~~~~n~~g~t~l~~a~~~  437 (563)
                      -|..+++++|+..   |+.+|.+|+.|+||||+|...+ .....+|.++|+|++..|++| ||+.++...
T Consensus       149 vGklkvie~Li~~---~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~~  214 (226)
T KOG4412|consen  149 VGKLKVIEYLISQ---GAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACNE  214 (226)
T ss_pred             ccchhhHHHHHhc---CCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHHH
Confidence            9999999999988   7899999999999999996666 445588889999999999988 998877643


No 30 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=7.4e-34  Score=289.74  Aligned_cols=244  Identities=18%  Similarity=0.190  Sum_probs=215.9

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV  185 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~  185 (563)
                      +.+++++|++.+.+ ++..+..|.||||+|+..|+.++|++|++.|+++..                .+..+.||||.|+
T Consensus        14 ~~~iv~~Ll~~g~~-~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~----------------~~~~~~t~L~~A~   76 (413)
T PHA02875         14 ELDIARRLLDIGIN-PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDV----------------KYPDIESELHDAV   76 (413)
T ss_pred             CHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc----------------cCCCcccHHHHHH
Confidence            99999999999877 566788999999999999999999999999987543                5677899999999


Q ss_pred             HcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhh
Q 039863          186 RYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFF  265 (563)
Q Consensus       186 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~  265 (563)
                      ..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..+          
T Consensus        77 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~----------  146 (413)
T PHA02875         77 EEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMG----------  146 (413)
T ss_pred             HCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC----------
Confidence            9999999999999998876666778999999999999999999999999999999999999999999999          


Q ss_pred             cccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHH
Q 039863          266 RKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELI  345 (563)
Q Consensus       266 ~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll  345 (563)
                        +.+++++|++.  +.+++..|..|.||||+|+..|+.+++++|++.|+++.......+.||+|+|+..|+.+++++|+
T Consensus       147 --~~~~v~~Ll~~--g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll  222 (413)
T PHA02875        147 --DIKGIELLIDH--KACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFI  222 (413)
T ss_pred             --CHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHH
Confidence              99999999997  88999999999999999999999999999999999996554444568999999999999999999


Q ss_pred             HhCCCCcc--ccccCCChHHHHHHHc---CChHHHHHhhh
Q 039863          346 RSCPSSCE--LVDDRGWNVFHFAAHS---GSRRTVEFLLE  380 (563)
Q Consensus       346 ~~~~~~~~--~~d~~g~t~Lh~A~~~---~~~~iv~~Ll~  380 (563)
                      ++|++...  ..+..+.|+|+.++..   ...+.++.++.
T Consensus       223 ~~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li~  262 (413)
T PHA02875        223 KRGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALIA  262 (413)
T ss_pred             HCCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHHH
Confidence            99988632  2367789999987654   33455555553


No 31 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.6e-33  Score=288.75  Aligned_cols=285  Identities=19%  Similarity=0.247  Sum_probs=238.8

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHH--cCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAAR--HGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHE  183 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~  183 (563)
                      ..+.|+.|+..+..  +.. ..+.|+++.+..  .++.++|++|+++|++++                ..+..|.||||.
T Consensus        17 ~~~~v~~ll~~~~~--~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn----------------~~d~~g~TpL~~   77 (489)
T PHA02798         17 KLSTVKLLIKSCNP--NEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVN----------------GLDNEYSTPLCT   77 (489)
T ss_pred             cHHHHHHHHhcCCh--hhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCC----------------CCCCCCCChHHH
Confidence            78899999976532  112 456787765444  458999999999999854                478999999999


Q ss_pred             HHHc-----CCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcC---CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhc
Q 039863          184 AVRY-----NQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERG---YKDVMEDILSTCESPVDHGPMGRTALHAAAFRE  255 (563)
Q Consensus       184 A~~~-----g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~  255 (563)
                      |+.+     ++.+++++|++.|++++ ..+..|.||||+|+..+   +.+++++|+++|++++..+..|.||||.|+..+
T Consensus        78 ~~~n~~~~~~~~~iv~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~  156 (489)
T PHA02798         78 ILSNIKDYKHMLDIVKILIENGADIN-KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSN  156 (489)
T ss_pred             HHHhHHhHHhHHHHHHHHHHCCCCCC-CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC
Confidence            9864     67899999999999988 47889999999999986   789999999999999999999999999999988


Q ss_pred             cccchhhhhhcccHHHHHHHHhccCCCCCccCC-CCCCCHHHHHHHc----CChHHHHHHHhcCCCCCccCCCCCChHHH
Q 039863          256 YTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPD-QQGWLPLHLAAHL----GNYYVVKELLKADISAAYKPDNEGKIPLH  330 (563)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d-~~g~tpLh~A~~~----g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~  330 (563)
                      ..         .+.+++++|++.  +.+++..+ ..|.||||.++..    ++.+++++|++.|+++ ...+..|.++++
T Consensus       157 ~~---------~~~~vv~~Ll~~--gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i-~~~~~~~~~~~~  224 (489)
T PHA02798        157 HH---------IDIEIIKLLLEK--GVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFII-NKENKSHKKKFM  224 (489)
T ss_pred             Cc---------chHHHHHHHHHh--CCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCc-ccCCccccchHH
Confidence            10         028999999997  88888774 5789999998764    4799999999999988 445777888876


Q ss_pred             -------HHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHH
Q 039863          331 -------LAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHA  403 (563)
Q Consensus       331 -------~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~  403 (563)
                             .+...+..+++..|+. +. +++.+|..|+||||+|+.+++.+++++|++.   |+++|.+|..|+||||+|+
T Consensus       225 ~~l~~l~~~~~~~~~~i~~~l~~-~~-dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~---GAdin~~d~~G~TpL~~A~  299 (489)
T PHA02798        225 EYLNSLLYDNKRFKKNILDFIFS-YI-DINQVDELGFNPLYYSVSHNNRKIFEYLLQL---GGDINIITELGNTCLFTAF  299 (489)
T ss_pred             HHHHHHHhhcccchHHHHHHHHh-cC-CCCCcCcCCccHHHHHHHcCcHHHHHHHHHc---CCcccccCCCCCcHHHHHH
Confidence                   2445677888888766 44 4588999999999999999999999999999   8999999999999999999


Q ss_pred             HcCC-chhhhccCcccCccccccCC
Q 039863          404 VSGS-FIKSFVCHPKVDRLAFNHQN  427 (563)
Q Consensus       404 ~~~~-~~~~~l~~~g~d~~~~n~~g  427 (563)
                      ..+. .+++.|++.+++++......
T Consensus       300 ~~~~~~iv~~lL~~~~~~~~i~~~~  324 (489)
T PHA02798        300 ENESKFIFNSILNKKPNKNTISYTY  324 (489)
T ss_pred             HcCcHHHHHHHHccCCCHHHHHHHH
Confidence            9984 46688999999998665544


No 32 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=5.6e-34  Score=233.46  Aligned_cols=208  Identities=26%  Similarity=0.329  Sum_probs=189.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCC-CCccccCcCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHhh
Q 039863          177 KDTALHEAVRYNQVDVVKMLTKEDP-NLSYDANEAGETPLYLAAERGYKDVMEDILS-TCESPVDHGPMGRTALHAAAFR  254 (563)
Q Consensus       177 g~t~L~~A~~~g~~~iv~~Ll~~~~-~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~Lh~A~~~  254 (563)
                      +.++.+.++...-..-|+.+++..+ .++...|.+|+||||+||..|+.+++.+|++ .+..++..|..|+||||+|+..
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~   82 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN   82 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence            4578888888888888999999988 6666666799999999999999999999995 3466777899999999999999


Q ss_pred             ccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHh
Q 039863          255 EYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAG  334 (563)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~  334 (563)
                      |            +.++++.|+.+ .+.+++..+..|.|+||+|+.+|.++++.+|++.|+.+ ..+|..|.||||.|+.
T Consensus        83 g------------~~evVk~Ll~r-~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i-~~kD~~~qtplHRAAa  148 (226)
T KOG4412|consen   83 G------------NDEVVKELLNR-SGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALI-RIKDKQGQTPLHRAAA  148 (226)
T ss_pred             C------------cHHHHHHHhcC-CCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCC-cccccccCchhHHHHh
Confidence            9            99999999998 69999999999999999999999999999999999877 7789999999999999


Q ss_pred             cCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHH
Q 039863          335 KGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHA  403 (563)
Q Consensus       335 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~  403 (563)
                      .|..+++++|+..+.. ++..|..|+||||.|..-++.++..+|++.   |++++..|++| ||+-.|.
T Consensus       149 vGklkvie~Li~~~a~-~n~qDk~G~TpL~~al~e~~~d~a~lLV~~---gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  149 VGKLKVIEYLISQGAP-LNTQDKYGFTPLHHALAEGHPDVAVLLVRA---GADTDREDKEG-TALRIAC  212 (226)
T ss_pred             ccchhhHHHHHhcCCC-CCcccccCccHHHHHHhccCchHHHHHHHh---ccceeeccccC-chHHHHH
Confidence            9999999999999855 488999999999999999999999999999   89999999999 9987765


No 33 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.8e-33  Score=278.78  Aligned_cols=379  Identities=11%  Similarity=0.036  Sum_probs=281.3

Q ss_pred             HHHHHHHcCChhhhh--hhhhccccc-cCCCCCceeeeecccCCCC---------CCCCCCccchhHHHHhhhhccCCCc
Q 039863           32 NLYEAAVEGHVGKFE--EHKAVLHQI-LTPNENTILHIHITALPNK---------TMKPNNKANSLWRMISTFKKQSSSD   99 (563)
Q Consensus        32 ~L~~Aa~~g~~~~v~--~Ll~~~~~~-~~~~g~t~Lh~A~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~   99 (563)
                      .|+..|+.=+++.+.  .|++.|++. ....|.||||.-..+-+..         +..++.++.+.+..+..++..+|  
T Consensus         6 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~--   83 (631)
T PHA02792          6 ILYDSCKTFNIDACSAQSLIESGANPLYEYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNI--   83 (631)
T ss_pred             HHHhHhhccchhHHHHHHHHHcCCCcccccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcc--
Confidence            566667666666654  788888887 5567889999886543321         33456788888888888999999  


Q ss_pred             hhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHH-cCcHHHHHHHHHhcCCCCCCCCchhHHH-------------
Q 039863          100 DREVIRGENFVRVILEMCPILLLKANAKGETLLHIAAR-HGHYDIVKVLIAECKKPHQNNPEEGVAA-------------  165 (563)
Q Consensus       100 ~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~-~g~~~iv~~Ll~~~~~~~~~~~~~~~~~-------------  165 (563)
                            ++|+|++|+++|++ ++..+..|.||||+|+. .|+.|+|++|++.|++....+ ..+..+             
T Consensus        84 ------~lElvk~LI~~GAd-vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~-~~g~~~~~~~~~~~~~~~~  155 (631)
T PHA02792         84 ------DIELLKLLISKGLE-INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNI-QYGYKIIIEQITRAEYYNW  155 (631)
T ss_pred             ------cHHHHHHHHHcCCC-cccccCCCCcceeEeecCCCChHHHHHHHHCCCCccccc-ccCcchhhhhcccccccch
Confidence                  99999999999988 66777789999999976 699999999999999854322 111110             


Q ss_pred             --H------HHHhccCCCCCCcHHHHHHHcC-------CHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcC--CHHHHH
Q 039863          166 --A------RLMLGTTNEAKDTALHEAVRYN-------QVDVVKMLTKEDPNLSYDANEAGETPLYLAAERG--YKDVME  228 (563)
Q Consensus       166 --~------~~~l~~~~~~g~t~L~~A~~~g-------~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g--~~~~v~  228 (563)
                        .      ...++.++..|.||||+|+.++       +.+++++|+++|+++.. .+..|.||||+|+.+.  ..|+++
T Consensus       156 ~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~-~d~~g~t~l~~~~~~~~i~~ei~~  234 (631)
T PHA02792        156 DDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY-YTYREHTTLYYYVDKCDIKREIFD  234 (631)
T ss_pred             hhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc-cCCCCChHHHHHHHcccchHHHHH
Confidence              0      1245678888999999999999       89999999999999884 6778999999999999  899999


Q ss_pred             HHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccC----CCC-------------C
Q 039863          229 DILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKP----DQQ-------------G  291 (563)
Q Consensus       229 ~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~----d~~-------------g  291 (563)
                      .|++...+.    ..-...|+.-....+-.    ....-+..++..|++...+.++-..    +..             -
T Consensus       235 ~L~~~~~~~----~~~~~~l~~y~~~~~~~----~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  306 (631)
T PHA02792        235 ALFDSNYSG----NELMNILSNYLRKQYRN----KNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSI  306 (631)
T ss_pred             HHHhccccc----cchHhHHHHHHHHHhcc----CccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHH
Confidence            999852211    11122333222222100    0001245688888875333232211    100             0


Q ss_pred             CCHHHHHHHcC--ChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCC--ChHHHHHH
Q 039863          292 WLPLHLAAHLG--NYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRG--WNVFHFAA  367 (563)
Q Consensus       292 ~tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g--~t~Lh~A~  367 (563)
                      +-.||.-...+  +.+++++|++.|+...   ......+++.|+..|+.+++++|+++|++. +..|..|  .||||+|.
T Consensus       307 q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GADI-N~kD~~g~~~TpLh~A~  382 (631)
T PHA02792        307 QDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNVV-VEDDDNIINIMPLFPTL  382 (631)
T ss_pred             HHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCch-hhhcCCCCChhHHHHHH
Confidence            11344445555  5889999999999873   223567799999999999999999999876 6677664  69999988


Q ss_pred             HcCChH---HHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC-CchhhhccCcccCccccccCCCCHHHHHHh
Q 039863          368 HSGSRR---TVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG-SFIKSFVCHPKVDRLAFNHQNNSAEDIIRS  436 (563)
Q Consensus       368 ~~~~~~---iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~-~~~~~~l~~~g~d~~~~n~~g~t~l~~a~~  436 (563)
                      .....+   ++++|+++   |+++|.+|..|+||||+|+..+ ..++++|+++|+|++.+|..|.||+++|..
T Consensus       383 ~n~~~~v~~IlklLIs~---GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        383 SIHESDVLSILKLCKPY---IDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HhccHhHHHHHHHHHhc---CCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            776654   57888998   8899999999999999999988 456699999999999999999999999975


No 34 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=2.5e-33  Score=262.34  Aligned_cols=190  Identities=23%  Similarity=0.202  Sum_probs=165.9

Q ss_pred             hhhchhhHHHHHHHHHcCChhhhhhhhhc-cccc----------cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhh
Q 039863           23 REKNIQLMDNLYEAAVEGHVGKFEEHKAV-LHQI----------LTPNENTILHIHITALPNKTMKPNNKANSLWRMIST   91 (563)
Q Consensus        23 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~-~~~~----------~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~   91 (563)
                      -.....|-+||.+||++|+.++|++|++. +++.          -..+|-+||-.|+.                      
T Consensus        36 ~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsa----------------------   93 (615)
T KOG0508|consen   36 IGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASA----------------------   93 (615)
T ss_pred             hccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhc----------------------
Confidence            34555666899999999999999999995 3333          34567789988888                      


Q ss_pred             hhccCCCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhc
Q 039863           92 FKKQSSSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLG  171 (563)
Q Consensus        92 ~~~~~g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~  171 (563)
                          .|        |+++|+.|++++.+ ++.......|||--||..||+++||+|+++|+++.                
T Consensus        94 ----AG--------Hl~vVk~L~~~ga~-VN~tT~TNStPLraACfDG~leivKyLvE~gad~~----------------  144 (615)
T KOG0508|consen   94 ----AG--------HLEVVKLLLRRGAS-VNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPE----------------  144 (615)
T ss_pred             ----cC--------cHHHHHHHHHhcCc-cccccccCCccHHHHHhcchhHHHHHHHHcCCCCc----------------
Confidence                99        99999999999966 67777778899999999999999999999999965                


Q ss_pred             cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 039863          172 TTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAA  251 (563)
Q Consensus       172 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A  251 (563)
                      ..|..|.|+||.||..||.+|+++|++.|++++ .++..|.|+||.|++.|+.|++++|+.+|+.+. .|..|.|||..|
T Consensus       145 IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn-~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~A  222 (615)
T KOG0508|consen  145 IANRHGHTCLMIACYKGHVDIAQYLLEQGADVN-AKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLA  222 (615)
T ss_pred             ccccCCCeeEEeeeccCchHHHHHHHHhCCCcc-hhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHH
Confidence            489999999999999999999999999999998 588999999999999999999999999998765 455699999999


Q ss_pred             HhhccccchhhhhhcccHHHHHHHHh
Q 039863          252 AFREYTLQTYYYFFRKDREIIKVLLR  277 (563)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~Ll~  277 (563)
                      ...|            +.+++..|++
T Consensus       223 a~tG------------~~~iVe~L~~  236 (615)
T KOG0508|consen  223 AVTG------------HTDIVERLLQ  236 (615)
T ss_pred             hhhc------------chHHHHHHhc
Confidence            9999            6666666663


No 35 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.2e-32  Score=283.72  Aligned_cols=283  Identities=15%  Similarity=0.153  Sum_probs=198.1

Q ss_pred             CCCchhHHHHHHHhhhhhhc-hhhHHH--HHHHHHcCChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCCCCCc
Q 039863            7 SDNQNAETRRERLRSVREKN-IQLMDN--LYEAAVEGHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMKPNNK   81 (563)
Q Consensus         7 ~~~~~~~~~~~~l~~~~~~~-~~~~~~--L~~Aa~~g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~~   81 (563)
                      ++.-..+.++..+...+..+ ..+.++  .+.+...++.+++++|++.|+++  .+..|.||||.|+.+           
T Consensus        13 ~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n-----------   81 (489)
T PHA02798         13 SDNVKLSTVKLLIKSCNPNEIVNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSN-----------   81 (489)
T ss_pred             cCcccHHHHHHHHhcCChhhhcccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHh-----------
Confidence            44555666666665433222 233443  34444555778888888876554  677788888877650           


Q ss_pred             cchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcC---cHHHHHHHHHhcCCCCCCC
Q 039863           82 ANSLWRMISTFKKQSSSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHG---HYDIVKVLIAECKKPHQNN  158 (563)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~~~~  158 (563)
                                ++...+        +.+++++|++.+++ ++.++..|.||||+|+..|   +.+++++|++.|+++.   
T Consensus        82 ----------~~~~~~--------~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn---  139 (489)
T PHA02798         82 ----------IKDYKH--------MLDIVKILIENGAD-INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTT---  139 (489)
T ss_pred             ----------HHhHHh--------HHHHHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc---
Confidence                      001124        67888888888777 6777778888888888765   6788888888887743   


Q ss_pred             CchhHHHHHHHhccCCCCCCcHHHHHHHcCC---HHHHHHHHhcCCCCccccCcCCCcHHHHHHHc----CCHHHHHHHH
Q 039863          159 PEEGVAAARLMLGTTNEAKDTALHEAVRYNQ---VDVVKMLTKEDPNLSYDANEAGETPLYLAAER----GYKDVMEDIL  231 (563)
Q Consensus       159 ~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~---~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~----g~~~~v~~Ll  231 (563)
                                   ..|..|.||||+|+..++   .+++++|++.|.++....+..|.||||.++..    ++.+++++|+
T Consensus       140 -------------~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li  206 (489)
T PHA02798        140 -------------LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFV  206 (489)
T ss_pred             -------------ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHH
Confidence                         367778888888888776   78888888888777654456677888877654    3678888888


Q ss_pred             hcCCCCCCCCCCCCcHHHHH-------HhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCCh
Q 039863          232 STCESPVDHGPMGRTALHAA-------AFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNY  304 (563)
Q Consensus       232 ~~~~~~~~~~~~g~t~Lh~A-------~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~  304 (563)
                      ++|++++..+..+.++++..       ....            ..+++.+|+.   +.+++.+|..|.||||+|+..|+.
T Consensus       207 ~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~------------~~~i~~~l~~---~~dvN~~d~~G~TPL~~A~~~~~~  271 (489)
T PHA02798        207 DNGFIINKENKSHKKKFMEYLNSLLYDNKRF------------KKNILDFIFS---YIDINQVDELGFNPLYYSVSHNNR  271 (489)
T ss_pred             HCCCCcccCCccccchHHHHHHHHHhhcccc------------hHHHHHHHHh---cCCCCCcCcCCccHHHHHHHcCcH
Confidence            88888777777777776621       1122            5566666654   467777788888888888888888


Q ss_pred             HHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCC
Q 039863          305 YVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSS  351 (563)
Q Consensus       305 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~  351 (563)
                      +++++|++.|+++ +..+..|.||||.|+..|+.++++.|++.+|+.
T Consensus       272 ~~v~~LL~~GAdi-n~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~  317 (489)
T PHA02798        272 KIFEYLLQLGGDI-NIITELGNTCLFTAFENESKFIFNSILNKKPNK  317 (489)
T ss_pred             HHHHHHHHcCCcc-cccCCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence            8888888888777 556777888888888888888888888777765


No 36 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=9e-31  Score=264.60  Aligned_cols=347  Identities=14%  Similarity=0.077  Sum_probs=258.1

Q ss_pred             hhHHHHHHHhhhhhhchhhHHHH-HHHHHcCChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCCCCCccchhHH
Q 039863           11 NAETRRERLRSVREKNIQLMDNL-YEAAVEGHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMKPNNKANSLWR   87 (563)
Q Consensus        11 ~~~~~~~~l~~~~~~~~~~~~~L-~~Aa~~g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~   87 (563)
                      ..+.+...+.+.+..+..+.+++ +.|..+|++|++++|++.|+++  ++..|++|||+|+..                 
T Consensus        53 ~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~-----------------  115 (631)
T PHA02792         53 KNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTS-----------------  115 (631)
T ss_pred             HHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecC-----------------
Confidence            34566777788888999999977 5677789999999999997766  666789999999661                 


Q ss_pred             HHhhhhccCCCchhhhhhhhhHHHHHHHhCch-----------------------------------hhhcccCCCCcHH
Q 039863           88 MISTFKKQSSSDDREVIRGENFVRVILEMCPI-----------------------------------LLLKANAKGETLL  132 (563)
Q Consensus        88 ~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~-----------------------------------~l~~~~~~g~t~L  132 (563)
                              .|        ++|++++|++.|++                                   .++..+..|.|||
T Consensus       116 --------~~--------~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L  179 (631)
T PHA02792        116 --------NP--------NVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVL  179 (631)
T ss_pred             --------CC--------ChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchH
Confidence                    58        99999999988854                                   1224556799999


Q ss_pred             HHHHHcC-------cHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCC
Q 039863          133 HIAARHG-------HYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYN--QVDVVKMLTKEDPNL  203 (563)
Q Consensus       133 h~A~~~g-------~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~  203 (563)
                      |+|+..+       +.|+++.|+++|++...                .|..|.||||+|+...  ..|+++.|++...+.
T Consensus       180 ~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~----------------~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~  243 (631)
T PHA02792        180 YYYIITRSQDGYATSLDVINYLISHEKEMRY----------------YTYREHTTLYYYVDKCDIKREIFDALFDSNYSG  243 (631)
T ss_pred             HHHHhhCCcccccCCHHHHHHHHhCCCCcCc----------------cCCCCChHHHHHHHcccchHHHHHHHHhccccc
Confidence            9999999       89999999999998554                7888999999999999  889999999852221


Q ss_pred             ccccCcCCCcHHHHH--HHc----CC--HHHHHHHHhcCC--CCCC----CCCCCCcHHHHHHhhccccchhh----hhh
Q 039863          204 SYDANEAGETPLYLA--AER----GY--KDVMEDILSTCE--SPVD----HGPMGRTALHAAAFREYTLQTYY----YFF  265 (563)
Q Consensus       204 ~~~~~~~g~tpL~~A--~~~----g~--~~~v~~Ll~~~~--~~~~----~~~~g~t~Lh~A~~~~~~~~~~~----~~~  265 (563)
                      .     .....|.--  .+.    .+  ..+|..|++.+.  ++..    .... .+............|...    ...
T Consensus       244 ~-----~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~q~~l~~Yl~~~  317 (631)
T PHA02792        244 N-----ELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNN-IIISSILKRYTDSIQDLLSEYVSYH  317 (631)
T ss_pred             c-----chHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhh-hHHHHHHHHHhHHHHHHHHHHHhcC
Confidence            1     112233222  222    12  348888888764  2211    1111 122222122222222222    122


Q ss_pred             cccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCC--CChHHHHHHhcCCH---HH
Q 039863          266 RKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNE--GKIPLHLAAGKGRA---YT  340 (563)
Q Consensus       266 ~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--g~tpL~~A~~~g~~---~~  340 (563)
                      ..+.+++++|++.  |....  ......+++.|+..|+.+++++|++.|+++. .+|..  +.||||+|......   ++
T Consensus       318 ~v~ieiIK~LId~--Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN-~kD~~g~~~TpLh~A~~n~~~~v~~I  392 (631)
T PHA02792        318 TVYINVIKCMIDE--GATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVV-EDDDNIINIMPLFPTLSIHESDVLSI  392 (631)
T ss_pred             CccHHHHHHHHHC--CCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchh-hhcCCCCChhHHHHHHHhccHhHHHH
Confidence            3589999999997  66543  2235667999999999999999999999984 44655  46999998776654   45


Q ss_pred             HHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHH--cC---------Cch
Q 039863          341 MQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAV--SG---------SFI  409 (563)
Q Consensus       341 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~--~~---------~~~  409 (563)
                      ++.|++++++. +.+|..|+||||+|+..++.+++++|+++   |+++|.+|..|+||||+|+.  .+         ..+
T Consensus       393 lklLIs~GADI-N~kD~~G~TPLh~Aa~~~n~eivelLLs~---GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~i  468 (631)
T PHA02792        393 LKLCKPYIDDI-NKIDKHGRSILYYCIESHSVSLVEWLIDN---GADINITTKYGSTCIGICVILAHACIPEIAELYIKI  468 (631)
T ss_pred             HHHHHhcCCcc-ccccccCcchHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHH
Confidence            78888888775 77999999999999999999999999999   89999999999999999976  22         124


Q ss_pred             hhhccCcccCcc
Q 039863          410 KSFVCHPKVDRL  421 (563)
Q Consensus       410 ~~~l~~~g~d~~  421 (563)
                      .++|+++|.++.
T Consensus       469 l~lLLs~~p~i~  480 (631)
T PHA02792        469 LEIILSKLPTIE  480 (631)
T ss_pred             HHHHHhcCCChh
Confidence            588888887765


No 37 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=8.4e-30  Score=249.50  Aligned_cols=210  Identities=27%  Similarity=0.316  Sum_probs=195.2

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHh-cCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcccc
Q 039863          129 ETLLHIAARHGHYDIVKVLIAE-CKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDA  207 (563)
Q Consensus       129 ~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~  207 (563)
                      .+.++.|+..|..+.|+.|++. |...+                ..|.+|.|+||+|+.+++.+++++|++++++++...
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~----------------~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~g  108 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVN----------------NPDREGVTLLHWAAINNRLDVARYLISHGADVNAIG  108 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCC----------------CCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccC
Confidence            4668899999999999999998 76644                478899999999999999999999999999999777


Q ss_pred             CcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccC
Q 039863          208 NEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKP  287 (563)
Q Consensus       208 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~  287 (563)
                      ..-+.||||+|+++|+..+|.+|+++|++++..|..|.+|||.|+..+            +.-++-+|+..  +.+++.+
T Consensus       109 G~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~------------~~~~vayll~~--~~d~d~~  174 (600)
T KOG0509|consen  109 GVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFG------------HTALVAYLLSK--GADIDLR  174 (600)
T ss_pred             CCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhC------------chHHHHHHHHh--cccCCCc
Confidence            788999999999999999999999999999999999999999999999            99999999987  7999999


Q ss_pred             CCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHH
Q 039863          288 DQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAA  367 (563)
Q Consensus       288 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~  367 (563)
                      |.+|+||||+|+.+|+...+..|++.++.+....+..|.||||+|+..|+..++. |+..+....+.+|.+|.||+.+|.
T Consensus       175 D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~  253 (600)
T KOG0509|consen  175 DNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQ  253 (600)
T ss_pred             CCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHH
Confidence            9999999999999999888999999999998777799999999999999999999 777777777889999999999997


Q ss_pred             Hc
Q 039863          368 HS  369 (563)
Q Consensus       368 ~~  369 (563)
                      ..
T Consensus       254 ~~  255 (600)
T KOG0509|consen  254 ER  255 (600)
T ss_pred             Hh
Confidence            76


No 38 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=1e-29  Score=248.89  Aligned_cols=206  Identities=26%  Similarity=0.317  Sum_probs=130.3

Q ss_pred             cHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCC-CC
Q 039863          213 TPLYLAAERGYKDVMEDILST-CESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPD-QQ  290 (563)
Q Consensus       213 tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d-~~  290 (563)
                      .-++.|+..|..+.++.|++. +.+++..|.+|-|+||.|+.++            +.+++++|+++  +++++..+ .-
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNN------------rl~v~r~li~~--gadvn~~gG~l  111 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINN------------RLDVARYLISH--GADVNAIGGVL  111 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcC------------cHHHHHHHHHc--CCCccccCCCC
Confidence            344555556666666666655 5555555556666666666665            56666666664  55555555 44


Q ss_pred             CCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcC
Q 039863          291 GWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSG  370 (563)
Q Consensus       291 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~  370 (563)
                      +.||||+|+++|+..+|..|+++|+++ ..+|.+|.+|||.|++.|+.-++-+++.++ .+++.+|.+|+||||.|+.++
T Consensus       112 ~stPLHWAar~G~~~vv~lLlqhGAdp-t~~D~~G~~~lHla~~~~~~~~vayll~~~-~d~d~~D~~grTpLmwAaykg  189 (600)
T KOG0509|consen  112 GSTPLHWAARNGHISVVDLLLQHGADP-TLKDKQGLTPLHLAAQFGHTALVAYLLSKG-ADIDLRDNNGRTPLMWAAYKG  189 (600)
T ss_pred             CCCcchHHHHcCcHHHHHHHHHcCCCC-ceecCCCCcHHHHHHHhCchHHHHHHHHhc-ccCCCcCCCCCCHHHHHHHhc
Confidence            556666666666666666666666666 445666666666666666666666666666 333666777777777777766


Q ss_pred             ChHHHHHhhhCCCcccCCCCCC-CCCChHHHHHHHcCCc-hhhhccCcccCccccccCCCCHHHHHHhc
Q 039863          371 SRRTVEFLLENPSLGNLMNEKN-YDGNTPLLEHAVSGSF-IKSFVCHPKVDRLAFNHQNNSAEDIIRSK  437 (563)
Q Consensus       371 ~~~iv~~Ll~~~~~~~~in~~d-~~G~TpLh~A~~~~~~-~~~~l~~~g~d~~~~n~~g~t~l~~a~~~  437 (563)
                      ....+..|++.   ++.++..| ..|+||||.|+..|+. .+.++++.|++.+..|.+|+||+++|.++
T Consensus       190 ~~~~v~~LL~f---~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  190 FALFVRRLLKF---GASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccHHHHHHHHh---cccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            66666666665   56666665 6777777777766632 22466666677777777777777777554


No 39 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94  E-value=1.1e-25  Score=205.28  Aligned_cols=180  Identities=14%  Similarity=0.127  Sum_probs=144.8

Q ss_pred             cCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcC--CHHHHHHHHhcCCC
Q 039863          125 NAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYN--QVDVVKMLTKEDPN  202 (563)
Q Consensus       125 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~  202 (563)
                      ...+.||||.|+..|+.++|+.|++.+.                   ..|..|.||||+|+..+  +.+++++|++.|++
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~n-------------------~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gad   78 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKFVN-------------------DCNDLYETPIFSCLEKDKVNVEILKFLIENGAD   78 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHhhh-------------------ccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCC
Confidence            4456799999999999999999987532                   36778999999998754  88999999999998


Q ss_pred             CccccCcCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhcc
Q 039863          203 LSYDANEAGETPLYLAAER---GYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSS  279 (563)
Q Consensus       203 ~~~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~  279 (563)
                      ++...+..|.||||+|+..   ++.+++++|+++|++++..+..|.||||.|+....          .+.+++++|++. 
T Consensus        79 vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~----------~~~~iv~~Li~~-  147 (209)
T PHA02859         79 VNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFN----------VRINVIKLLIDS-  147 (209)
T ss_pred             CCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhcc----------CCHHHHHHHHHc-
Confidence            8754345789999988764   46899999999999999889999999998875320          168888988886 


Q ss_pred             CCCCCccCCCCCCCHHHH-HHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcC
Q 039863          280 KGTQTTKPDQQGWLPLHL-AAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKG  336 (563)
Q Consensus       280 ~~~~~~~~d~~g~tpLh~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g  336 (563)
                       +.+++..|..|.||||. ++..++.+++++|++.|+++ ..+|..|.||||+|..++
T Consensus       148 -gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi-~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        148 -GVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDI-NETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             -CCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhhh
Confidence             78888888888899985 45677888888888888877 556788888888887654


No 40 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.94  E-value=1.6e-27  Score=242.72  Aligned_cols=318  Identities=19%  Similarity=0.218  Sum_probs=252.5

Q ss_pred             hhHHHHHHHHHcCChhhhhhhhhccccc--cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhh
Q 039863           28 QLMDNLYEAAVEGHVGKFEEHKAVLHQI--LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIR  105 (563)
Q Consensus        28 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~--~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  105 (563)
                      +-.++|-.||..|+-|.++.|+..|.++  .|+.|.+||-+|+.                          .|        
T Consensus       756 n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaat--------------------------ag--------  801 (2131)
T KOG4369|consen  756 NIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAAT--------------------------AG--------  801 (2131)
T ss_pred             cccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcc--------------------------cC--------
Confidence            3345888888888888888888887777  78888888888888                          88        


Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV  185 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~  185 (563)
                      |..+|+.|+....++-...|..++|+|-+||..|..++|++||..|++...                ++-...|||-+|.
T Consensus       802 h~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankeh----------------rnvsDytPlsla~  865 (2131)
T KOG4369|consen  802 HITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEH----------------RNVSDYTPLSLAR  865 (2131)
T ss_pred             chHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccc----------------cchhhcCchhhhc
Confidence            888888888887776677788888888888888888888888888887443                5666678888888


Q ss_pred             HcCCHHHHHHHHhcCCCCcccc-CcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHhhccccchhhh
Q 039863          186 RYNQVDVVKMLTKEDPNLSYDA-NEAGETPLYLAAERGYKDVMEDILSTCESPVD-HGPMGRTALHAAAFREYTLQTYYY  263 (563)
Q Consensus       186 ~~g~~~iv~~Ll~~~~~~~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~Lh~A~~~~~~~~~~~~  263 (563)
                      ..|..+++..|+..|.+++... .+.|.+||++|..+|+.+.++.|++.|.++|. ...+-+|+|-+|+..|        
T Consensus       866 Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqg--------  937 (2131)
T KOG4369|consen  866 SGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQG--------  937 (2131)
T ss_pred             CcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccC--------
Confidence            8888888888888888776543 35688888888888888888888888888775 4556778888888888        


Q ss_pred             hhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCC-CCChHHHHHHhcCCHHHHH
Q 039863          264 FFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDN-EGKIPLHLAAGKGRAYTMQ  342 (563)
Q Consensus       264 ~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~tpL~~A~~~g~~~~v~  342 (563)
                          ..+++.+|+..  ...+..+-..|.|||+-++..|.+++-++|+..|++.+...-. ...|+|-+++..||...+.
T Consensus       938 ----r~evv~lLLa~--~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~ 1011 (2131)
T KOG4369|consen  938 ----RPEVVFLLLAA--QANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVP 1011 (2131)
T ss_pred             ----cchHHHHHHHH--hhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhH
Confidence                88888888886  7777777788888888888888888888888888877544322 3347788888888888888


Q ss_pred             HHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCCc-hhhhc
Q 039863          343 ELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGSF-IKSFV  413 (563)
Q Consensus       343 ~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~~-~~~~l  413 (563)
                      .|+..... ...++.+|.|+|..|+..|+...+.+|+++   +++++.+|...+|++.-|.+.|+. +++++
T Consensus      1012 ~lln~~at-v~v~NkkG~T~Lwla~~Gg~lss~~il~~~---~ad~d~qdnr~~S~~maafRKgh~~iVk~m 1079 (2131)
T KOG4369|consen 1012 KLLNGDAT-VRVPNKKGCTVLWLASAGGALSSCPILVSS---VADADQQDNRTNSRTMAAFRKGHFAIVKKM 1079 (2131)
T ss_pred             HhhCCccc-eecccCCCCcccchhccCCccccchHHhhc---ccChhhhhcccccccHHHHHhchhheeccc
Confidence            88765443 367788888888888888888888888888   778888888888888888888743 33444


No 41 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94  E-value=7e-26  Score=206.45  Aligned_cols=176  Identities=18%  Similarity=0.181  Sum_probs=153.5

Q ss_pred             CCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcC--ChHHHHHHHhcCCCCCcc
Q 039863          243 MGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLG--NYYVVKELLKADISAAYK  320 (563)
Q Consensus       243 ~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~~~~~~~~  320 (563)
                      .+.||||.|+..+            +.+.++.|++.     ++..+..|.||||+|+..+  +.+++++|++.|+++...
T Consensus        20 ~~~~pL~~A~~~~------------~~~~vk~Li~~-----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~   82 (209)
T PHA02859         20 RYCNPLFYYVEKD------------DIEGVKKWIKF-----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFK   82 (209)
T ss_pred             ccCcHHHHHHHhC------------cHHHHHHHHHh-----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCcc
Confidence            4689999999999            99999999874     4567889999999999854  899999999999999555


Q ss_pred             CCCCCChHHHHHHhc---CCHHHHHHHHHhCCCCccccccCCChHHHHHHHc--CChHHHHHhhhCCCcccCCCCCCCCC
Q 039863          321 PDNEGKIPLHLAAGK---GRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHS--GSRRTVEFLLENPSLGNLMNEKNYDG  395 (563)
Q Consensus       321 ~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~--~~~~iv~~Ll~~~~~~~~in~~d~~G  395 (563)
                      .+..|.||||+|+..   ++.++++.|++++.+. +.+|..|.||||.|+.+  ++.+++++|++.   |++++.+|.+|
T Consensus        83 ~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~---gadin~~d~~g  158 (209)
T PHA02859         83 TRDNNLSALHHYLSFNKNVEPEILKILIDSGSSI-TEEDEDGKNLLHMYMCNFNVRINVIKLLIDS---GVSFLNKDFDN  158 (209)
T ss_pred             CCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhccCCHHHHHHHHHc---CCCcccccCCC
Confidence            446899999998753   5799999999988776 77999999999999864  689999999999   89999999999


Q ss_pred             ChHHHHHH-HcC-CchhhhccCcccCccccccCCCCHHHHHHhccc
Q 039863          396 NTPLLEHA-VSG-SFIKSFVCHPKVDRLAFNHQNNSAEDIIRSKKV  439 (563)
Q Consensus       396 ~TpLh~A~-~~~-~~~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~~  439 (563)
                      +||||.++ ..+ ..++++|++.|+|++.+|..|+||+++|..+..
T Consensus       159 ~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~~  204 (209)
T PHA02859        159 NNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRNL  204 (209)
T ss_pred             CcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhhh
Confidence            99999654 444 456699999999999999999999999987654


No 42 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.94  E-value=1.1e-26  Score=236.67  Aligned_cols=316  Identities=22%  Similarity=0.223  Sum_probs=279.0

Q ss_pred             cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHH
Q 039863           56 LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIA  135 (563)
Q Consensus        56 ~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A  135 (563)
                      ..++-.|+|..||+                          .|        |.|++++|+.++.. +..++..|.+||.+|
T Consensus       753 Te~n~~t~LT~aca--------------------------gg--------h~e~vellv~rgan-iehrdkkgf~plIma  797 (2131)
T KOG4369|consen  753 TEPNIKTNLTSACA--------------------------GG--------HREEVELLVVRGAN-IEHRDKKGFVPLIMA  797 (2131)
T ss_pred             cCcccccccccccc--------------------------Cc--------cHHHHHHHHHhccc-ccccccccchhhhhh
Confidence            44556799999999                          99        99999999999887 788999999999999


Q ss_pred             HHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHH
Q 039863          136 ARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPL  215 (563)
Q Consensus       136 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL  215 (563)
                      +..||..+|+.|+.+.++...               ..|..++|+|-+||..|+.++|+.||..+.+-. .++....|||
T Consensus       798 atagh~tvV~~llk~ha~vea---------------Qsdrtkdt~lSlacsggr~~vvelLl~~ganke-hrnvsDytPl  861 (2131)
T KOG4369|consen  798 ATAGHITVVQDLLKAHADVEA---------------QSDRTKDTMLSLACSGGRTRVVELLLNAGANKE-HRNVSDYTPL  861 (2131)
T ss_pred             cccCchHHHHHHHhhhhhhhh---------------hcccccCceEEEecCCCcchHHHHHHHhhcccc-ccchhhcCch
Confidence            999999999999998877432               467889999999999999999999999998866 4788899999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCCCCC--CCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccC-CCCCC
Q 039863          216 YLAAERGYKDVMEDILSTCESPVDH--GPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKP-DQQGW  292 (563)
Q Consensus       216 ~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~-d~~g~  292 (563)
                      .+|...|+.+++..|+..|+.++.+  .+.|..||++|...+            +....+.|++.  +.+++.. ..+.+
T Consensus       862 sla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmng------------h~~at~~ll~~--gsdiNaqIeTNrn  927 (2131)
T KOG4369|consen  862 SLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNG------------HQAATLSLLQP--GSDINAQIETNRN  927 (2131)
T ss_pred             hhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhcc------------ccHHHHHHhcc--cchhccccccccc
Confidence            9999999999999999999888764  567999999999999            99999999996  6666654 34677


Q ss_pred             CHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccc-cccCCChHHHHHHHcCC
Q 039863          293 LPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCEL-VDDRGWNVFHFAAHSGS  371 (563)
Q Consensus       293 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~-~d~~g~t~Lh~A~~~~~  371 (563)
                      |.|-+|+..|..+++..||...+.+ ..+-+.|.|||.-++..|.+++-..||..|.+.... ....-.|+|-+++..||
T Consensus       928 Taltla~fqgr~evv~lLLa~~anv-ehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh 1006 (2131)
T KOG4369|consen  928 TALTLALFQGRPEVVFLLLAAQANV-EHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGH 1006 (2131)
T ss_pred             cceeeccccCcchHHHHHHHHhhhh-hhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCc
Confidence            9999999999999999999988877 445788999999999999999999999999886433 23344599999999999


Q ss_pred             hHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCCc-hhhhccCcccCccccccCCCCHHHHHHhcccc
Q 039863          372 RRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGSF-IKSFVCHPKVDRLAFNHQNNSAEDIIRSKKVL  440 (563)
Q Consensus       372 ~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~~-~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~~~  440 (563)
                      .+.+..|+..   .+.+..++++|+|+|-+|+..+.. .+.+|+++++|++..|+...+++.-|.+++.+
T Consensus      1007 ~kfv~~lln~---~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~ 1073 (2131)
T KOG4369|consen 1007 TKFVPKLLNG---DATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHF 1073 (2131)
T ss_pred             hhhhHHhhCC---ccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchh
Confidence            9999999987   678899999999999999998855 45899999999999999999999988887654


No 43 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=1.4e-25  Score=219.30  Aligned_cols=212  Identities=17%  Similarity=0.069  Sum_probs=182.6

Q ss_pred             HHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHhhccccchhhhhh
Q 039863          192 VVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPV------DHGPMGRTALHAAAFREYTLQTYYYFF  265 (563)
Q Consensus       192 iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~------~~~~~g~t~Lh~A~~~~~~~~~~~~~~  265 (563)
                      +-++++.+|.+++. ...++     +|+..+..|++++|+++|++++      ..+..++|+||.++..+..        
T Consensus        64 ~~~~~~~~~~~i~~-~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n--------  129 (437)
T PHA02795         64 LYDYFRIHRDNIDQ-YIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYV--------  129 (437)
T ss_pred             HHHHHHHcCcchhh-hhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCC--------
Confidence            45688888888763 33333     8999999999999999999987      6788899999999993321        


Q ss_pred             cccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCC-----CCCChHHHHHHhcCCHHH
Q 039863          266 RKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPD-----NEGKIPLHLAAGKGRAYT  340 (563)
Q Consensus       266 ~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~-----~~g~tpL~~A~~~g~~~~  340 (563)
                        +.+++++|+++  |++++..  ++.||+|.|+..++.+++++|+++|+......+     ..+.+++|.|+..++.++
T Consensus       130 --~~eiV~~LI~~--GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eI  203 (437)
T PHA02795        130 --EIDIVDFMVDH--GAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEI  203 (437)
T ss_pred             --CHHHHHHHHHC--CCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHH
Confidence              99999999997  9998874  458999999999999999999999975533321     347899999999999999


Q ss_pred             HHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCC---------chhh
Q 039863          341 MQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGS---------FIKS  411 (563)
Q Consensus       341 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~---------~~~~  411 (563)
                      ++.|++++++. +.+|..|+||||+|+..|+.+++++|++.   |+++|.+|..|.||||+|+..|.         .+++
T Consensus       204 ve~LIs~GADI-N~kD~~G~TpLh~Aa~~g~~eiVelLL~~---GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIve  279 (437)
T PHA02795        204 YKLCIPYIEDI-NQLDAGGRTLLYRAIYAGYIDLVSWLLEN---GANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILE  279 (437)
T ss_pred             HHHHHhCcCCc-CcCCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHH
Confidence            99999998775 78999999999999999999999999999   89999999999999999999884         4679


Q ss_pred             hccCcccCccccccCC
Q 039863          412 FVCHPKVDRLAFNHQN  427 (563)
Q Consensus       412 ~l~~~g~d~~~~n~~g  427 (563)
                      +|+++|++++.....+
T Consensus       280 lLL~~gadI~~~~~~~  295 (437)
T PHA02795        280 ILLREPLSIDCIKLAI  295 (437)
T ss_pred             HHHhCCCCCCchhHHh
Confidence            9999999998766544


No 44 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93  E-value=1.6e-26  Score=195.62  Aligned_cols=238  Identities=20%  Similarity=0.210  Sum_probs=214.4

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 039863          173 TNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAA  252 (563)
Q Consensus       173 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~  252 (563)
                      ++..|..-+--+.+.++.+++..++...++.....+..|.++++.++-.++.+.+..++.++...+..+..+++|+.+++
T Consensus        58 ~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsV  137 (296)
T KOG0502|consen   58 RNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSV  137 (296)
T ss_pred             HHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHH
Confidence            55667778888999999999999999988888788889999999999999999999999999999999999999999999


Q ss_pred             hhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHH
Q 039863          253 FREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLA  332 (563)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A  332 (563)
                      ...            +.+....+.    ...++..|..|.|||.+|+.+|++++|++|++.|+++ ....+...++|.+|
T Consensus       138 hql------------~L~~~~~~~----~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp-~~lgk~resALsLA  200 (296)
T KOG0502|consen  138 HQL------------HLDVVDLLV----NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADP-DALGKYRESALSLA  200 (296)
T ss_pred             HHH------------HHHHHHHHh----hccccCccccCchHhHHHHhcCchHHHHHHHHcCCCh-hhhhhhhhhhHhHH
Confidence            877            677766665    4568899999999999999999999999999999988 44467778999999


Q ss_pred             HhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCCchhhh
Q 039863          333 AGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGSFIKSF  412 (563)
Q Consensus       333 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~~~~~~  412 (563)
                      +..|..++|+.|+...++. +..|.+|-|||.+|++-++.+|++.|+..   |++++..|..|++++.+|+..|..+++.
T Consensus       201 t~ggytdiV~lLL~r~vdV-NvyDwNGgTpLlyAvrgnhvkcve~Ll~s---GAd~t~e~dsGy~~mdlAValGyr~Vqq  276 (296)
T KOG0502|consen  201 TRGGYTDIVELLLTREVDV-NVYDWNGGTPLLYAVRGNHVKCVESLLNS---GADVTQEDDSGYWIMDLAVALGYRIVQQ  276 (296)
T ss_pred             hcCChHHHHHHHHhcCCCc-ceeccCCCceeeeeecCChHHHHHHHHhc---CCCcccccccCCcHHHHHHHhhhHHHHH
Confidence            9999999999999998876 88999999999999999999999999999   9999999999999999999999778877


Q ss_pred             ccCcccCccccccCCCCHH
Q 039863          413 VCHPKVDRLAFNHQNNSAE  431 (563)
Q Consensus       413 l~~~g~d~~~~n~~g~t~l  431 (563)
                      .+++-++.+..|+...+|+
T Consensus       277 vie~h~lkl~Q~~~~~~~~  295 (296)
T KOG0502|consen  277 VIEKHALKLCQDSEKRTPL  295 (296)
T ss_pred             HHHHHHHHHhhcccCCCCC
Confidence            7777777777777776665


No 45 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.93  E-value=1.5e-24  Score=212.01  Aligned_cols=233  Identities=13%  Similarity=0.078  Sum_probs=184.8

Q ss_pred             HHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHH--
Q 039863          109 FVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVR--  186 (563)
Q Consensus       109 ~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~--  186 (563)
                      +-+|++.++.+ ++....+|     +|+..+..|++++|+.+|+++..         ....+ ..+..++|+||+|+.  
T Consensus        64 ~~~~~~~~~~~-i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~---------~~~~~-~~~~~~~~~L~~~~~n~  127 (437)
T PHA02795         64 LYDYFRIHRDN-IDQYIVDR-----LFAYITYKDIISALVSKNYMEDI---------FSIII-KNCNSVQDLLLYYLSNA  127 (437)
T ss_pred             HHHHHHHcCcc-hhhhhhhh-----HHhhcchHHHHHHHHhcccccch---------hhhhh-hccccccHHHHHHHHhc
Confidence            34778888776 44444444     99999999999999999998542         00112 366779999999999  


Q ss_pred             cCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC------CCCCCcHHHHHHhhccccch
Q 039863          187 YNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDH------GPMGRTALHAAAFREYTLQT  260 (563)
Q Consensus       187 ~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~------~~~g~t~Lh~A~~~~~~~~~  260 (563)
                      .|+.++|++|+++|+++..   ..+.||||.|+..++.+++++|+++|++....      +..+.+++|.|...+     
T Consensus       128 ~n~~eiV~~LI~~GADIn~---~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~-----  199 (437)
T PHA02795        128 YVEIDIVDFMVDHGAVIYK---IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPT-----  199 (437)
T ss_pred             CCCHHHHHHHHHCCCCCCC---CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcC-----
Confidence            9999999999999999874   34589999999999999999999999753322      134778888888888     


Q ss_pred             hhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCC---
Q 039863          261 YYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGR---  337 (563)
Q Consensus       261 ~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~---  337 (563)
                             +.+++++|++.  +++++..|..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+   
T Consensus       200 -------~~eIve~LIs~--GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI-N~~d~~G~TpLh~Aa~~g~~~~  269 (437)
T PHA02795        200 -------VLEIYKLCIPY--IEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV-NAVMSNGYTCLDVAVDRGSVIA  269 (437)
T ss_pred             -------HHHHHHHHHhC--cCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCccc
Confidence                   88999999987  8899999999999999999999999999999999988 5668899999999998884   


Q ss_pred             -----HHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhC
Q 039863          338 -----AYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLEN  381 (563)
Q Consensus       338 -----~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  381 (563)
                           .++++.|++++++. +..+   .+++..  ...+.++++.+++.
T Consensus       270 ~~~~~~eIvelLL~~gadI-~~~~---~~~~~~--~~~n~~~ik~lI~y  312 (437)
T PHA02795        270 RRETHLKILEILLREPLSI-DCIK---LAILNN--TIENHDVIKLCIKY  312 (437)
T ss_pred             ccccHHHHHHHHHhCCCCC-Cchh---HHhhhc--ccchHHHHHHHHHH
Confidence                 68999999887754 2222   222221  11256788888876


No 46 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91  E-value=6.6e-25  Score=185.91  Aligned_cols=248  Identities=21%  Similarity=0.256  Sum_probs=162.2

Q ss_pred             HHHHHHHcCChhhhhhhhhccccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHH
Q 039863           32 NLYEAAVEGHVGKFEEHKAVLHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVR  111 (563)
Q Consensus        32 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~  111 (563)
                      .+..++..|-.+--..|...--......|...+-.+..                          .|        +-+++.
T Consensus        34 ~~~~~~~m~~t~p~~~l~~~~s~~~~~lge~~~~~~~~--------------------------s~--------nsd~~v   79 (296)
T KOG0502|consen   34 ELFEQVEMGTTEPRCALTAEISALRNALGESLLTVAVR--------------------------SG--------NSDVAV   79 (296)
T ss_pred             HHHHHhhccccchhHHHHHHHHHHHHhcCCcccchhhh--------------------------cC--------CcHHHH
Confidence            55555555555554444443222244555555666666                          66        666777


Q ss_pred             HHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHH
Q 039863          112 VILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVD  191 (563)
Q Consensus       112 ~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~  191 (563)
                      .++.-+++.+...+.+|.++++.|+-.|+.+.+..++.++...+.                .+--+.+|+.+++...+.+
T Consensus        80 ~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgne----------------vs~~p~s~~slsVhql~L~  143 (296)
T KOG0502|consen   80 QSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNE----------------VSLMPWSPLSLSVHQLHLD  143 (296)
T ss_pred             HhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCc----------------cccccCChhhHHHHHHHHH
Confidence            777666666666777777777777777777777777777766443                4555677777777777777


Q ss_pred             HHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHH
Q 039863          192 VVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREI  271 (563)
Q Consensus       192 iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~  271 (563)
                      ++..+.+.-   ....|+.|.|||.+|+..|++.+|++|++.|+++....+...++|.+|+..|            ..++
T Consensus       144 ~~~~~~~n~---VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~gg------------ytdi  208 (296)
T KOG0502|consen  144 VVDLLVNNK---VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGG------------YTDI  208 (296)
T ss_pred             HHHHHhhcc---ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCC------------hHHH
Confidence            666665532   2246777777777777777777777777777777776666677777777776            6677


Q ss_pred             HHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhC
Q 039863          272 IKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSC  348 (563)
Q Consensus       272 ~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~  348 (563)
                      +++|+.+  +.+++..|.+|-|||-+|++-++.++++.|+..|+++ ...+..|++++..|+..|+. +|+.++++.
T Consensus       209 V~lLL~r--~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~-t~e~dsGy~~mdlAValGyr-~Vqqvie~h  281 (296)
T KOG0502|consen  209 VELLLTR--EVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADV-TQEDDSGYWIMDLAVALGYR-IVQQVIEKH  281 (296)
T ss_pred             HHHHHhc--CCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCc-ccccccCCcHHHHHHHhhhH-HHHHHHHHH
Confidence            7777765  6666666666666666666666666666666666666 44455666666666666654 555555443


No 47 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90  E-value=2.3e-23  Score=206.80  Aligned_cols=254  Identities=27%  Similarity=0.252  Sum_probs=202.6

Q ss_pred             cHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCc
Q 039863          130 TLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANE  209 (563)
Q Consensus       130 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~  209 (563)
                      +=|--||..|+.+.|..||+........-.   ......-.+.+|.+|.|+||.|+.+|+.++++.|++..+-+.. .+.
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~---~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl-~d~   80 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLF---FTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDL-CDT   80 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCC---CCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhh-hhc
Confidence            346789999999999999986432111000   0000112456888999999999999999999999999887764 568


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCC
Q 039863          210 AGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQ  289 (563)
Q Consensus       210 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~  289 (563)
                      .|.+|||+|+..|+.++++.++.++..++.....|.||||.|++++            +.+++.+|+..  +.+...++.
T Consensus        81 kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhg------------h~dvv~~Ll~~--~adp~i~nn  146 (854)
T KOG0507|consen   81 KGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHG------------HLEVVFYLLKK--NADPFIRNN  146 (854)
T ss_pred             cCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhc------------chHHHHHHHhc--CCCccccCc
Confidence            8999999999999999999999999888999999999999999999            99999999997  999999999


Q ss_pred             CCCCHHHHHHHcCChHHHHHHHhcCCCCC-------ccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChH
Q 039863          290 QGWLPLHLAAHLGNYYVVKELLKADISAA-------YKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNV  362 (563)
Q Consensus       290 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~-------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~  362 (563)
                      .+.|+|..|++.|..++++.|+.......       ..++-.+.+|||.|+++|+.++++.|++.+-+. +.....| |+
T Consensus       147 s~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~di-n~~t~~g-ta  224 (854)
T KOG0507|consen  147 SKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDI-NYTTEDG-TA  224 (854)
T ss_pred             ccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCc-ccccccc-hh
Confidence            99999999999999999999988532221       123445667888888888888888888776554 5444444 78


Q ss_pred             HHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC
Q 039863          363 FHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG  406 (563)
Q Consensus       363 Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~  406 (563)
                      ||.|+..|..++|.+|++.   |.....+|.+|.|+|.+-....
T Consensus       225 lheaalcgk~evvr~ll~~---gin~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  225 LHEAALCGKAEVVRFLLEI---GINTHIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             hhhHhhcCcchhhhHHHhh---ccccccccccchHHHHHHHhcc
Confidence            8888888888888888887   6677778888888887766654


No 48 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.90  E-value=3.9e-23  Score=225.42  Aligned_cols=244  Identities=24%  Similarity=0.219  Sum_probs=185.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhc--CCCCccccCcCCCcHHH-HHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 039863          176 AKDTALHEAVRYNQVDVVKMLTKE--DPNLSYDANEAGETPLY-LAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAA  252 (563)
Q Consensus       176 ~g~t~L~~A~~~g~~~iv~~Ll~~--~~~~~~~~~~~g~tpL~-~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~  252 (563)
                      .++..|+.|+..|+.+.++.+++.  +.+++ ..|..|.|||| .|+..++.++++.|++.+.    .+..|.||||.|+
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in-~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~   90 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLNIN-CPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS   90 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccCCC-CcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence            457899999999999999999998  66665 46789999999 8999999999999999886    5678999999998


Q ss_pred             hhccccchhhhhhcccHHHHHHHHhccCC--------CCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccC---
Q 039863          253 FREYTLQTYYYFFRKDREIIKVLLRSSKG--------TQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKP---  321 (563)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~--------~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~---  321 (563)
                      ..+..         ....++..+......        .........|.||||+|+..|+.++++.|++.|+++....   
T Consensus        91 ~~~~~---------~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~  161 (743)
T TIGR00870        91 LEYVD---------AVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGD  161 (743)
T ss_pred             hccHH---------HHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCc
Confidence            73211         023344444443111        0111223569999999999999999999999999885321   


Q ss_pred             ----------CCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcC---------ChHHHHHhhhCC
Q 039863          322 ----------DNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSG---------SRRTVEFLLENP  382 (563)
Q Consensus       322 ----------~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~---------~~~iv~~Ll~~~  382 (563)
                                ...|.+|||.|+..|+.++++.|++++.+ ++..|..|+||||+|+..+         ...+.+++++..
T Consensus       162 ~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad-in~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll  240 (743)
T TIGR00870       162 FFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD-ILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLL  240 (743)
T ss_pred             hhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc-hhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence                      13589999999999999999999998765 4778999999999999987         234666777664


Q ss_pred             CcccCC----CCCCCCCChHHHHHHHcCC-chhhhccCcccCccccccCCCCHHHHH
Q 039863          383 SLGNLM----NEKNYDGNTPLLEHAVSGS-FIKSFVCHPKVDRLAFNHQNNSAEDII  434 (563)
Q Consensus       383 ~~~~~i----n~~d~~G~TpLh~A~~~~~-~~~~~l~~~g~d~~~~n~~g~t~l~~a  434 (563)
                      ....+.    +..|.+|.||||+|+..++ .+.++|++.+.+..........|.+++
T Consensus       241 ~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~~  297 (743)
T TIGR00870       241 DKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLS  297 (743)
T ss_pred             hccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhHh
Confidence            333344    7789999999999999984 456888776555554455555555444


No 49 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.90  E-value=7.2e-23  Score=223.36  Aligned_cols=239  Identities=21%  Similarity=0.194  Sum_probs=184.6

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHh--cCCCCCCCCchhHHHHHHHhccCCCCCCcHHH-HHHHcCCHHHHHHHHhcCCCC
Q 039863          127 KGETLLHIAARHGHYDIVKVLIAE--CKKPHQNNPEEGVAAARLMLGTTNEAKDTALH-EAVRYNQVDVVKMLTKEDPNL  203 (563)
Q Consensus       127 ~g~t~Lh~A~~~g~~~iv~~Ll~~--~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~-~A~~~g~~~iv~~Ll~~~~~~  203 (563)
                      .++.+|+.||..|+.+.|+.+++.  +.+                ++..|..|.|||| .|+.+++.++++.|++.+.  
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~----------------in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~--   77 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLN----------------INCPDRLGRSALFVAAIENENLELTELLLNLSC--   77 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccC----------------CCCcCccchhHHHHHHHhcChHHHHHHHHhCCC--
Confidence            457899999999999999999998  444                3457889999999 8999999999999999876  


Q ss_pred             ccccCcCCCcHHHHHHHcC---CHHHHHHHHhcCCCC----------CCCCCCCCcHHHHHHhhccccchhhhhhcccHH
Q 039863          204 SYDANEAGETPLYLAAERG---YKDVMEDILSTCESP----------VDHGPMGRTALHAAAFREYTLQTYYYFFRKDRE  270 (563)
Q Consensus       204 ~~~~~~~g~tpL~~A~~~g---~~~~v~~Ll~~~~~~----------~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~  270 (563)
                         .+..|.||||.|+..+   ...++..+...+.+.          ......|.||||.|+..+            +.+
T Consensus        78 ---~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~------------~~e  142 (743)
T TIGR00870        78 ---RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQ------------NYE  142 (743)
T ss_pred             ---CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhC------------CHH
Confidence               5677999999998732   223344444443221          112356999999999999            999


Q ss_pred             HHHHHHhccCCCCCccCC--------------CCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcC
Q 039863          271 IIKVLLRSSKGTQTTKPD--------------QQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKG  336 (563)
Q Consensus       271 ~~~~Ll~~~~~~~~~~~d--------------~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g  336 (563)
                      ++++|++.  +++++..+              ..|.+|||.|+..|+.+++++|++.|+++ +..|..|+||||+|+..+
T Consensus       143 iVklLL~~--GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi-n~~d~~g~T~Lh~A~~~~  219 (743)
T TIGR00870       143 IVKLLLER--GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI-LTADSLGNTLLHLLVMEN  219 (743)
T ss_pred             HHHHHHhC--CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch-hhHhhhhhHHHHHHHhhh
Confidence            99999997  77776542              35899999999999999999999999877 567999999999999886


Q ss_pred             ---------CHHHHHHHHHhCCCC------ccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHH
Q 039863          337 ---------RAYTMQELIRSCPSS------CELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLE  401 (563)
Q Consensus       337 ---------~~~~v~~Ll~~~~~~------~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~  401 (563)
                               ...+.+.++..+...      ....|.+|.||||+|+..|+.+++++|++.   +..........+.|.++
T Consensus       220 ~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~---~~~~kk~~a~~~~~~~~  296 (743)
T TIGR00870       220 EFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAI---KYKQKKFVAWPNGQQLL  296 (743)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHH---HHhcceeeccCcchHhH
Confidence                     123344444443322      145688999999999999999999999985   33334445566666666


Q ss_pred             HHH
Q 039863          402 HAV  404 (563)
Q Consensus       402 A~~  404 (563)
                      +..
T Consensus       297 ~~~  299 (743)
T TIGR00870       297 SLY  299 (743)
T ss_pred             hhh
Confidence            654


No 50 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.89  E-value=8.5e-23  Score=202.80  Aligned_cols=242  Identities=26%  Similarity=0.239  Sum_probs=212.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcC-----CC-------CccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCc
Q 039863          179 TALHEAVRYNQVDVVKMLTKED-----PN-------LSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRT  246 (563)
Q Consensus       179 t~L~~A~~~g~~~iv~~Ll~~~-----~~-------~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t  246 (563)
                      +-|-.|++.|+.+.+..|++..     +.       -....|.+|.|.||.|+.+|+.++++.|+++-+-.+..+..|.+
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~   84 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL   84 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence            3467899999999999999861     11       11135678999999999999999999999999888888899999


Q ss_pred             HHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCC
Q 039863          247 ALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGK  326 (563)
Q Consensus       247 ~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~  326 (563)
                      |||+|+..|            +.++++.++.+  ....+....+|.||||.|++.|+.+++.+|++++.+. ..++..+.
T Consensus        85 plhlaaw~g------------~~e~vkmll~q--~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp-~i~nns~~  149 (854)
T KOG0507|consen   85 PLHLAAWNG------------NLEIVKMLLLQ--TDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADP-FIRNNSKE  149 (854)
T ss_pred             eEEehhhcC------------cchHHHHHHhc--ccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCc-cccCcccc
Confidence            999999999            99999999998  6888999999999999999999999999999999999 66799999


Q ss_pred             hHHHHHHhcCCHHHHHHHHHhCCCC-------ccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHH
Q 039863          327 IPLHLAAGKGRAYTMQELIRSCPSS-------CELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPL  399 (563)
Q Consensus       327 tpL~~A~~~g~~~~v~~Ll~~~~~~-------~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpL  399 (563)
                      |+|-.|++.|..++++.|++..-..       ...++..+-+|||.|+++|+.++++.|++.   |.++|.....| |+|
T Consensus       150 t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~a---g~din~~t~~g-tal  225 (854)
T KOG0507|consen  150 TVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEA---GFDINYTTEDG-TAL  225 (854)
T ss_pred             cHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhc---CCCcccccccc-hhh
Confidence            9999999999999999999862110       123456678999999999999999999999   88999998887 999


Q ss_pred             HHHHHcC-CchhhhccCcccCccccccCCCCHHHHHHhccc
Q 039863          400 LEHAVSG-SFIKSFVCHPKVDRLAFNHQNNSAEDIIRSKKV  439 (563)
Q Consensus       400 h~A~~~~-~~~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~~  439 (563)
                      |-|+..| ..++.+|++.|++..++|..|+|++++......
T Consensus       226 heaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~  266 (854)
T KOG0507|consen  226 HEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQE  266 (854)
T ss_pred             hhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcch
Confidence            9999999 557799999999999999999999999876543


No 51 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89  E-value=7e-22  Score=216.61  Aligned_cols=172  Identities=22%  Similarity=0.224  Sum_probs=85.9

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCC
Q 039863          211 GETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQ  290 (563)
Q Consensus       211 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~  290 (563)
                      +.++|+.||..|+.++++.|++.|++++..|..|+||||.|+..|            +.+++++|++.  +.+++..|.+
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g------------~~~~v~~Ll~~--gadin~~d~~  590 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKG------------YEDCVLVLLKH--ACNVHIRDAN  590 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------------hHHHHHHHHhc--CCCCCCcCCC
Confidence            344555555555555555555555555555555555555555555            55555555553  4445555555


Q ss_pred             CCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcC
Q 039863          291 GWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSG  370 (563)
Q Consensus       291 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~  370 (563)
                      |.||||.|+..|+.+++++|++.+...   ....+.++||.|+..|+.++++.|++++.+. +..|.+|+||||+|+..|
T Consensus       591 G~TpL~~A~~~g~~~iv~~L~~~~~~~---~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadi-n~~d~~G~TpLh~A~~~g  666 (823)
T PLN03192        591 GNTALWNAISAKHHKIFRILYHFASIS---DPHAAGDLLCTAAKRNDLTAMKELLKQGLNV-DSEDHQGATALQVAMAED  666 (823)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHhcCccc---CcccCchHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCC
Confidence            555555555555555555555433322   1223444555555555555555555544443 344555555555555555


Q ss_pred             ChHHHHHhhhCCCcccCCCCCCCCC-ChHHHHHH
Q 039863          371 SRRTVEFLLENPSLGNLMNEKNYDG-NTPLLEHA  403 (563)
Q Consensus       371 ~~~iv~~Ll~~~~~~~~in~~d~~G-~TpLh~A~  403 (563)
                      +.+++++|+++   |++++..|..| .||++++.
T Consensus       667 ~~~iv~~Ll~~---GAdv~~~~~~g~~t~~~l~~  697 (823)
T PLN03192        667 HVDMVRLLIMN---GADVDKANTDDDFSPTELRE  697 (823)
T ss_pred             cHHHHHHHHHc---CCCCCCCCCCCCCCHHHHHH
Confidence            55555555554   44555555444 45554443


No 52 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89  E-value=5.6e-22  Score=217.34  Aligned_cols=196  Identities=20%  Similarity=0.206  Sum_probs=170.7

Q ss_pred             HHcCChhhhhhhhhccccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHHHHHHh
Q 039863           37 AVEGHVGKFEEHKAVLHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVRVILEM  116 (563)
Q Consensus        37 a~~g~~~~v~~Ll~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~Ll~~  116 (563)
                      ....+.++-..+.+.+....++.+.++||.||.                          .|        +.++++.|+..
T Consensus       502 ~~l~~l~v~~ll~~~~~~~~~~~~~~~L~~Aa~--------------------------~g--------~~~~l~~Ll~~  547 (823)
T PLN03192        502 KELHDLNVGDLLGDNGGEHDDPNMASNLLTVAS--------------------------TG--------NAALLEELLKA  547 (823)
T ss_pred             hhhccccHHHHHhhcccccCCccchhHHHHHHH--------------------------cC--------CHHHHHHHHHC
Confidence            344555555566666555566777899999999                          99        99999999999


Q ss_pred             CchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHH
Q 039863          117 CPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKML  196 (563)
Q Consensus       117 ~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~L  196 (563)
                      +.+ ++..|..|.||||+||..|+.++|++|+++|++++                .+|..|.||||+|+..|+.+++++|
T Consensus       548 G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin----------------~~d~~G~TpL~~A~~~g~~~iv~~L  610 (823)
T PLN03192        548 KLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVH----------------IRDANGNTALWNAISAKHHKIFRIL  610 (823)
T ss_pred             CCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCC----------------CcCCCCCCHHHHHHHhCCHHHHHHH
Confidence            887 68899999999999999999999999999998854                4788999999999999999999999


Q ss_pred             HhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHH
Q 039863          197 TKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLL  276 (563)
Q Consensus       197 l~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll  276 (563)
                      ++.+....   ...+.++||.|+..|+.++++.|+++|++++..|.+|.||||.|+..+            +.+++++|+
T Consensus       611 ~~~~~~~~---~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g------------~~~iv~~Ll  675 (823)
T PLN03192        611 YHFASISD---PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAED------------HVDMVRLLI  675 (823)
T ss_pred             HhcCcccC---cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC------------cHHHHHHHH
Confidence            98765432   346779999999999999999999999999999999999999999999            999999999


Q ss_pred             hccCCCCCccCCCCC-CCHHHHHHH
Q 039863          277 RSSKGTQTTKPDQQG-WLPLHLAAH  300 (563)
Q Consensus       277 ~~~~~~~~~~~d~~g-~tpLh~A~~  300 (563)
                      +.  +++++..+..| .+|+..+..
T Consensus       676 ~~--GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        676 MN--GADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             Hc--CCCCCCCCCCCCCCHHHHHHH
Confidence            97  88999888887 888876643


No 53 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.87  E-value=3.2e-22  Score=192.22  Aligned_cols=231  Identities=22%  Similarity=0.234  Sum_probs=182.7

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccc
Q 039863          180 ALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQ  259 (563)
Q Consensus       180 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~  259 (563)
                      .+..|+..|..+-|+.|+..+...+ ..+.+|.|+||.+|...+.+||++|+++|++++..+..++||||.|+.++    
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~-~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg----  117 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPN-LCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCG----  117 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCcc-ccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccc----
Confidence            4667888899999999999987775 57889999999999999999999999999999999999999999999999    


Q ss_pred             hhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHh-cCCCCCccCCCCCChHHHHHHhcCCH
Q 039863          260 TYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLK-ADISAAYKPDNEGKIPLHLAAGKGRA  338 (563)
Q Consensus       260 ~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~tpL~~A~~~g~~  338 (563)
                              +..++.+|+..  +++....+.+|..|+..+..-...+++..-.. .+.++...+...-.+-|+        
T Consensus       118 --------~~~i~~~li~~--gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~--------  179 (527)
T KOG0505|consen  118 --------YLNIVEYLIQH--GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLD--------  179 (527)
T ss_pred             --------cHHHHHHHHHh--hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHH--------
Confidence                    89999999987  88888888888888887766555555544433 222221111111112221        


Q ss_pred             HHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCC-chhhhccCcc
Q 039863          339 YTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGS-FIKSFVCHPK  417 (563)
Q Consensus       339 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~-~~~~~l~~~g  417 (563)
                      ++-.++ ..+... ...+..|.|.||+|+.+|..++.++|++.   |.+++.+|.+|+||||.|+..+. ..+++|+++|
T Consensus       180 D~~q~l-~~G~~~-d~~~~rG~T~lHvAaa~Gy~e~~~lLl~a---g~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~g  254 (527)
T KOG0505|consen  180 DARQWL-NAGAEL-DARHARGATALHVAAANGYTEVAALLLQA---GYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHG  254 (527)
T ss_pred             HHHHHH-hccccc-cccccccchHHHHHHhhhHHHHHHHHHHh---ccCcccccccCCCcccHHHHhhhHhHHHHHHHhh
Confidence            223333 344433 55666699999999999999999999999   88999999999999999999994 4568999999


Q ss_pred             cCccccccCCCCHHHHHHhcc
Q 039863          418 VDRLAFNHQNNSAEDIIRSKK  438 (563)
Q Consensus       418 ~d~~~~n~~g~t~l~~a~~~~  438 (563)
                      ++++.++..|+||++++....
T Consensus       255 a~~d~~t~~g~~p~dv~dee~  275 (527)
T KOG0505|consen  255 ADMDAKTKMGETPLDVADEEE  275 (527)
T ss_pred             cccchhhhcCCCCccchhhhh
Confidence            999999999999999987643


No 54 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86  E-value=3.1e-21  Score=175.91  Aligned_cols=161  Identities=27%  Similarity=0.319  Sum_probs=86.6

Q ss_pred             hcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHH-----cCCHHHHHHH
Q 039863          122 LKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVR-----YNQVDVVKML  196 (563)
Q Consensus       122 ~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~-----~g~~~iv~~L  196 (563)
                      +.-|.+|+|+||||+..+++++|+.||+.|..               -++.+|.-|+||+++|+.     ..+.++|..|
T Consensus       262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC---------------~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~L  326 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANFDVVSILLDSGVC---------------DVDQQNRAGYTPVMLAALAKLKQPADRTVVERL  326 (452)
T ss_pred             hhhcCCCCeeeeeeecccchHHHHHHhccCcc---------------cccccccccccHHHHHHHHhhcchhhHHHHHHH
Confidence            33455566666666666666666666655532               134455556666655553     2344555555


Q ss_pred             HhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHH
Q 039863          197 TKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLL  276 (563)
Q Consensus       197 l~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll  276 (563)
                      .+.| +++......|+|+|++|+..|+.++|+.||..|+++|..|.+|.|+|++|+.+|            +.|++++|+
T Consensus       327 F~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHG------------hkEivklLL  393 (452)
T KOG0514|consen  327 FKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHG------------HKEIVKLLL  393 (452)
T ss_pred             Hhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhC------------hHHHHHHHh
Confidence            5443 233334455555555555555555555555555555555555555555555555            555555555


Q ss_pred             hccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHH
Q 039863          277 RSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELL  311 (563)
Q Consensus       277 ~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll  311 (563)
                      .. ...++...|.+|.|+|.+|...|+.++.-.|.
T Consensus       394 A~-p~cd~sLtD~DgSTAl~IAleagh~eIa~mlY  427 (452)
T KOG0514|consen  394 AV-PSCDISLTDVDGSTALSIALEAGHREIAVMLY  427 (452)
T ss_pred             cc-CcccceeecCCCchhhhhHHhcCchHHHHHHH
Confidence            54 44555555555555555555555555544443


No 55 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85  E-value=8.6e-21  Score=173.07  Aligned_cols=169  Identities=27%  Similarity=0.313  Sum_probs=95.5

Q ss_pred             HHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHc-----CCHHHHHHHHhcCCCCCC
Q 039863          165 AARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAER-----GYKDVMEDILSTCESPVD  239 (563)
Q Consensus       165 ~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~-----g~~~~v~~Ll~~~~~~~~  239 (563)
                      .+..+++..|.+|+|+||||+..+++++|+.||+.|.--....|+.|.||+++++..     .+.++|..|...|.- | 
T Consensus       256 lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnV-N-  333 (452)
T KOG0514|consen  256 LLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDV-N-  333 (452)
T ss_pred             HHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCc-c-
Confidence            344566777777777777777777777777777776544445677777777776653     234444444444321 1 


Q ss_pred             CCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCc
Q 039863          240 HGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAY  319 (563)
Q Consensus       240 ~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~  319 (563)
                                                                   -...+.|.|+|++|+.+|+.++|+.||..|+++ +
T Consensus       334 ---------------------------------------------aKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdV-N  367 (452)
T KOG0514|consen  334 ---------------------------------------------AKASQHGQTALMLAVSHGRVDMVKALLACGADV-N  367 (452)
T ss_pred             ---------------------------------------------hhhhhhcchhhhhhhhcCcHHHHHHHHHccCCC-c
Confidence                                                         122334555555555555555555555555555 3


Q ss_pred             cCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhC
Q 039863          320 KPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLEN  381 (563)
Q Consensus       320 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  381 (563)
                      ..|.+|.|+|++|+++||.|+++.||.....++...|.+|-|+|.+|...||.+|.-+|..+
T Consensus       368 iQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  368 IQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             cccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            34555555555555555555555555554444455555555555555555555555555443


No 56 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.84  E-value=2.2e-20  Score=179.60  Aligned_cols=229  Identities=25%  Similarity=0.346  Sum_probs=184.3

Q ss_pred             cHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCc
Q 039863          130 TLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANE  209 (563)
Q Consensus       130 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~  209 (563)
                      -.+.-||..|..+-|+.|+..|+.++                ..|.+|.|+||-+|...+.+||++|++.+.+++ ..|.
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga~~~----------------~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn-~~d~  104 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGASPN----------------LCNVDGLTALHQACIDDNLEMVKFLVENGANVN-AQDN  104 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCCCcc----------------ccCCccchhHHHHHhcccHHHHHHHHHhcCCcc-cccc
Confidence            34667899999999999999997753                489999999999999999999999999999998 5888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCC
Q 039863          210 AGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQ  289 (563)
Q Consensus       210 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~  289 (563)
                      .++||||.|+..|+.+++++|+++|++....+..|..|+-.+....            ..+++...+.. .+.+      
T Consensus       105 e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea------------~~~~l~~~~~r-~gi~------  165 (527)
T KOG0505|consen  105 EGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEA------------TLDVLETEMAR-QGID------  165 (527)
T ss_pred             ccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcc------------hhHHHHHHHHH-hccc------
Confidence            9999999999999999999999999999999999999988876544            44444444433 1222      


Q ss_pred             CCCCHHHHHHHc-CC---hHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHH
Q 039863          290 QGWLPLHLAAHL-GN---YYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHF  365 (563)
Q Consensus       290 ~g~tpLh~A~~~-g~---~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~  365 (563)
                           + -++.. ..   +.=+...+..|..... .+..|-|.||.|+.+|..++++.|++.+.+. +..|.+||||||.
T Consensus       166 -----i-ea~R~~~e~~ml~D~~q~l~~G~~~d~-~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~-~~~D~dgWtPlHA  237 (527)
T KOG0505|consen  166 -----I-EAARKAEEQTMLDDARQWLNAGAELDA-RHARGATALHVAAANGYTEVAALLLQAGYSV-NIKDYDGWTPLHA  237 (527)
T ss_pred             -----H-HHHhhhhHHHHHHHHHHHHhccccccc-cccccchHHHHHHhhhHHHHHHHHHHhccCc-ccccccCCCcccH
Confidence                 1 11111 11   1112233335555533 3444999999999999999999999998776 7799999999999


Q ss_pred             HHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHc
Q 039863          366 AAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVS  405 (563)
Q Consensus       366 A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~  405 (563)
                      |+..++.++.++|+++   |++++.....|.|||.+|...
T Consensus       238 AA~Wg~~~~~elL~~~---ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  238 AAHWGQEDACELLVEH---GADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             HHHhhhHhHHHHHHHh---hcccchhhhcCCCCccchhhh
Confidence            9999999999999999   889999999999999988763


No 57 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.82  E-value=5.5e-20  Score=150.29  Aligned_cols=142  Identities=24%  Similarity=0.240  Sum_probs=130.1

Q ss_pred             HHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChH
Q 039863          294 PLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRR  373 (563)
Q Consensus       294 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~  373 (563)
                      .+.+|+..+.+..|+.||+..++..+.+|.+|+||||-|+.+|+.+|++.|+..+++. +.+...||||||-||+..+.+
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcccchh
Confidence            4668899999999999999999999999999999999999999999999999998887 778999999999999999999


Q ss_pred             HHHHhhhCCCcccCCCCCCCCCChHHHHHHHcCCc---hhhhccCcccCccccccCCCCHHHHHHhccc
Q 039863          374 TVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSGSF---IKSFVCHPKVDRLAFNHQNNSAEDIIRSKKV  439 (563)
Q Consensus       374 iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~~~---~~~~l~~~g~d~~~~n~~g~t~l~~a~~~~~  439 (563)
                      ++.+|+.+   |+++|++.....||||+|+..+..   ..-+|...++++-.+++.+.||+++|.+...
T Consensus       145 va~~LLqh---gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~  210 (228)
T KOG0512|consen  145 VAGRLLQH---GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM  210 (228)
T ss_pred             HHHHHHhc---cCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence            99999999   999999999999999999998732   2356678899999999999999999987643


No 58 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.82  E-value=6.9e-20  Score=160.63  Aligned_cols=144  Identities=15%  Similarity=0.063  Sum_probs=123.9

Q ss_pred             CCCCccCCCCCCCHHHHHHHcCCh----HHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHH---HHHHHHhCCCCcc
Q 039863          281 GTQTTKPDQQGWLPLHLAAHLGNY----YVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYT---MQELIRSCPSSCE  353 (563)
Q Consensus       281 ~~~~~~~d~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~---v~~Ll~~~~~~~~  353 (563)
                      +.+++..+.++.++||.|++.|+.    +++++|++.+..+ ...|..|+||||+|+..|+.+.   +++|++.+.+. +
T Consensus        10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi-n   87 (166)
T PHA02743         10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLL-HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADI-N   87 (166)
T ss_pred             chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhh-hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC-C
Confidence            566677788899999999999998    5666777777765 5668899999999999988654   78999988765 6


Q ss_pred             ccc-cCCChHHHHHHHcCChHHHHHhhh-CCCcccCCCCCCCCCChHHHHHHHcCC-chhhhccCcccCccccccCCCC
Q 039863          354 LVD-DRGWNVFHFAAHSGSRRTVEFLLE-NPSLGNLMNEKNYDGNTPLLEHAVSGS-FIKSFVCHPKVDRLAFNHQNNS  429 (563)
Q Consensus       354 ~~d-~~g~t~Lh~A~~~~~~~iv~~Ll~-~~~~~~~in~~d~~G~TpLh~A~~~~~-~~~~~l~~~g~d~~~~n~~g~t  429 (563)
                      .+| ..|+||||+|+.+++.+++++|++ .   |++++.+|..|+||||+|+..+. .++++|+++|++++..+..|.+
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~---gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQL---GVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhcc---CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence            677 589999999999999999999995 6   78999999999999999999885 4679999999999999988764


No 59 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.80  E-value=7.5e-19  Score=154.08  Aligned_cols=145  Identities=17%  Similarity=0.170  Sum_probs=123.1

Q ss_pred             CCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccH----HHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHH---
Q 039863          234 CESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDR----EIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYV---  306 (563)
Q Consensus       234 ~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~----~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~---  306 (563)
                      +.+++..+.++.++||.|+..+            +.    +++++|++.  +..++..|..|+||||+|+..|+.+.   
T Consensus        10 ~~~~~~~~~~~~~~l~~a~~~g------------~~~~l~~~~~~l~~~--g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~   75 (166)
T PHA02743         10 NLGAVEIDEDEQNTFLRICRTG------------NIYELMEVAPFISGD--GHLLHRYDHHGRQCTHMVAWYDRANAVMK   75 (166)
T ss_pred             chHHhhhccCCCcHHHHHHHcC------------CHHHHHHHHHHHhhc--chhhhccCCCCCcHHHHHHHhCccCHHHH
Confidence            4555566778889999999988            66    556666665  77888899999999999999988654   


Q ss_pred             HHHHHhcCCCCCccCC-CCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcc
Q 039863          307 VKELLKADISAAYKPD-NEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLG  385 (563)
Q Consensus       307 v~~Ll~~~~~~~~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~  385 (563)
                      +++|++.|+++. .++ ..|.||||+|+..|+.+++++|+......++..|..|+||||+|+..++.+++++|++.   |
T Consensus        76 i~~Ll~~Gadin-~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~---g  151 (166)
T PHA02743         76 IELLVNMGADIN-ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRAN---G  151 (166)
T ss_pred             HHHHHHcCCCCC-CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc---C
Confidence            799999999884 455 58999999999999999999999643444577899999999999999999999999999   8


Q ss_pred             cCCCCCCCCCC
Q 039863          386 NLMNEKNYDGN  396 (563)
Q Consensus       386 ~~in~~d~~G~  396 (563)
                      ++++.++..|.
T Consensus       152 a~~~~~~~~~~  162 (166)
T PHA02743        152 AVCDDPLSIGL  162 (166)
T ss_pred             CCCCCcccCCc
Confidence            89999998875


No 60 
>PHA02741 hypothetical protein; Provisional
Probab=99.79  E-value=2.4e-18  Score=151.77  Aligned_cols=143  Identities=20%  Similarity=0.264  Sum_probs=119.6

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV  185 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~  185 (563)
                      +..|++-++       ..++..|.||||+||+.|+.++|+.|+.......          ....++.+|..|.||||+|+
T Consensus         6 ~~~~~~~~~-------~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~----------~ga~in~~d~~g~T~Lh~A~   68 (169)
T PHA02741          6 FMTCLEEMI-------AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDC----------HAAALNATDDAGQMCIHIAA   68 (169)
T ss_pred             HHHHHHHHh-------hccccCCCCHHHHHHHcCCHHHHHHHHHHhccch----------hhhhhhccCCCCCcHHHHHH
Confidence            444555543       4578899999999999999999999976431100          01135678999999999999


Q ss_pred             HcCC----HHHHHHHHhcCCCCccccC-cCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHhhccccc
Q 039863          186 RYNQ----VDVVKMLTKEDPNLSYDAN-EAGETPLYLAAERGYKDVMEDILS-TCESPVDHGPMGRTALHAAAFREYTLQ  259 (563)
Q Consensus       186 ~~g~----~~iv~~Ll~~~~~~~~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~Lh~A~~~~~~~~  259 (563)
                      ..|+    .+++++|++.+++++. .+ ..|.||||+|+..++.+++++|+. .+++++..+..|.||||.|+..+    
T Consensus        69 ~~g~~~~~~~ii~~Ll~~gadin~-~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~----  143 (169)
T PHA02741         69 EKHEAQLAAEIIDHLIELGADINA-QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNE----  143 (169)
T ss_pred             HcCChHHHHHHHHHHHHcCCCCCC-CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC----
Confidence            9999    5899999999999874 45 489999999999999999999997 58999999999999999999999    


Q ss_pred             hhhhhhcccHHHHHHHHhc
Q 039863          260 TYYYFFRKDREIIKVLLRS  278 (563)
Q Consensus       260 ~~~~~~~~~~~~~~~Ll~~  278 (563)
                              +.+++++|++.
T Consensus       144 --------~~~iv~~L~~~  154 (169)
T PHA02741        144 --------DVAMMQILREI  154 (169)
T ss_pred             --------CHHHHHHHHHH
Confidence                    99999999986


No 61 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.79  E-value=3.3e-18  Score=161.39  Aligned_cols=161  Identities=19%  Similarity=0.159  Sum_probs=129.3

Q ss_pred             hhcccCCCCc-HHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 039863          121 LLKANAKGET-LLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKE  199 (563)
Q Consensus       121 l~~~~~~g~t-~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  199 (563)
                      +...|..|.| +||.|+..|+.++|++|++.|++++..+            ...+..|.||||+|+..++.+++++|++.
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~------------~~sd~~g~TpLh~Aa~~~~~eivklLL~~   92 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPF------------PLSENSKTNPLIYAIDCDNDDAAKLLIRY   92 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccC------------cccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            4556777765 5677778899999999999999865311            01246899999999999999999999999


Q ss_pred             CCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhcc
Q 039863          200 DPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSS  279 (563)
Q Consensus       200 ~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~  279 (563)
                      |++++...+..|.||||+|+..++.+++++|++.|++++..+..|.||||.|+..+            +.+++..+..  
T Consensus        93 GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~------------~~~~~~~~~~--  158 (300)
T PHA02884         93 GADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMIC------------NNFLAFMICD--  158 (300)
T ss_pred             CCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC------------ChhHHHHhcC--
Confidence            99988544667999999999999999999999999999999999999999999877            6666654432  


Q ss_pred             CCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCC
Q 039863          280 KGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADI  315 (563)
Q Consensus       280 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~  315 (563)
                           ...+..+.+|++++   ++.++++.|++++.
T Consensus       159 -----~~~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        159 -----NEISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             -----CcccccccChhhhh---ccHHHHHHHHHHHH
Confidence                 12466677888875   46888888888765


No 62 
>PHA02741 hypothetical protein; Provisional
Probab=99.78  E-value=4.1e-18  Score=150.25  Aligned_cols=134  Identities=22%  Similarity=0.284  Sum_probs=91.6

Q ss_pred             HHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhc------CCCCccccCcCCCcHHHHHHHcCC----HHHHHHHHhcCCC
Q 039863          167 RLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKE------DPNLSYDANEAGETPLYLAAERGY----KDVMEDILSTCES  236 (563)
Q Consensus       167 ~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~------~~~~~~~~~~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~  236 (563)
                      ..++..++..|.||||+|++.|+.++++.|+..      +.++. ..|..|.||||+|+..|+    .+++++|++.+++
T Consensus        11 ~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in-~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad   89 (169)
T PHA02741         11 EEMIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALN-ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD   89 (169)
T ss_pred             HHHhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhh-ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC
Confidence            334556777888888888888888888887542      23443 456677777777777777    4667777777777


Q ss_pred             CCCCCC-CCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcC
Q 039863          237 PVDHGP-MGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKAD  314 (563)
Q Consensus       237 ~~~~~~-~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~  314 (563)
                      ++..+. .|.||||.|+..+            +.+++++|+.. .+.+++..|.+|.||||+|+..++.++++.|++.+
T Consensus        90 in~~~~~~g~TpLh~A~~~~------------~~~iv~~Ll~~-~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~  155 (169)
T PHA02741         90 INAQEMLEGDTALHLAAHRR------------DHDLAEWLCCQ-PGIDLHFCNADNKSPFELAIDNEDVAMMQILREIV  155 (169)
T ss_pred             CCCCCcCCCCCHHHHHHHcC------------CHHHHHHHHhC-CCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence            666653 6777777777666            66777777653 35666666666777777777777667766666643


No 63 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.77  E-value=1.3e-17  Score=157.27  Aligned_cols=157  Identities=13%  Similarity=0.141  Sum_probs=128.1

Q ss_pred             hccCCCCCCc-HHHHHHHcCCHHHHHHHHhcCCCCccc---cCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC-CCCC
Q 039863          170 LGTTNEAKDT-ALHEAVRYNQVDVVKMLTKEDPNLSYD---ANEAGETPLYLAAERGYKDVMEDILSTCESPVDH-GPMG  244 (563)
Q Consensus       170 l~~~~~~g~t-~L~~A~~~g~~~iv~~Ll~~~~~~~~~---~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~g  244 (563)
                      +..+|..|.| +||.|++.|+.+++++|++.|++++..   .+..|.||||+|+..++.+++++|+++|++++.. +..|
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g  104 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK  104 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence            5567777766 466677778999999999999988743   2468999999999999999999999999999975 5679


Q ss_pred             CcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCC
Q 039863          245 RTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNE  324 (563)
Q Consensus       245 ~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~  324 (563)
                      .||||.|+..+            +.+++++|+..  +++++..|..|.||||+|+..++.+++..+...+      .+..
T Consensus       105 ~TpLh~Aa~~~------------~~eivklLL~~--GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~------~~~~  164 (300)
T PHA02884        105 ITPLYISVLHG------------CLKCLEILLSY--GADINIQTNDMVTPIELALMICNNFLAFMICDNE------ISNF  164 (300)
T ss_pred             CCHHHHHHHcC------------CHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc------cccc
Confidence            99999999998            99999999986  8999999999999999999988888776554322      3556


Q ss_pred             CChHHHHHHhcCCHHHHHHHHHhCC
Q 039863          325 GKIPLHLAAGKGRAYTMQELIRSCP  349 (563)
Q Consensus       325 g~tpL~~A~~~g~~~~v~~Ll~~~~  349 (563)
                      +.+|++++   ++.++++.|+.+..
T Consensus       165 ~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        165 YKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             ccChhhhh---ccHHHHHHHHHHHH
Confidence            77888865   36788888887754


No 64 
>PF13962 PGG:  Domain of unknown function
Probab=99.77  E-value=4.4e-20  Score=149.42  Aligned_cols=61  Identities=46%  Similarity=0.746  Sum_probs=56.6

Q ss_pred             HHHHHhhhchHHHHHHHHHHHHhhhcccCCCcccCCCCCCCCcccccccc-cccEEEEeccCC
Q 039863          500 EQSVNESKESHLVVAALIATVTFTAGITVPGGYINGIDPDQGAAVLAKRS-AFQAFVVKSSHP  561 (563)
Q Consensus       500 ~~~~~~~~~s~~~va~LiaTv~Faa~~t~PGG~~~~~~~~~G~~~~~~~~-~F~~F~i~~~~~  561 (563)
                      +||+++++++++|||||||||||||+||||||++|+++ +.|+|++.+++ .|.+|+++|++|
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~-~~G~~il~~~~~~f~~F~~~nt~a   62 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDD-DAGTPILAKKPSAFKAFLISNTIA   62 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc-CCCCchhccccchhhhHHHHHHHH
Confidence            47899999999999999999999999999999998655 89999999888 999999999875


No 65 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.77  E-value=4e-18  Score=148.24  Aligned_cols=135  Identities=16%  Similarity=0.195  Sum_probs=110.4

Q ss_pred             hhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCH---HHHHHHH
Q 039863          121 LLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQV---DVVKMLT  197 (563)
Q Consensus       121 l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~---~iv~~Ll  197 (563)
                      ...+|..|.||||+||+.|+  +++.+...+.....         ....+...|..|.||||+|+..|+.   +++++|+
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~---------~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll   78 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGG--VTDLLAFKNAISDE---------NRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLM   78 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcch---------hHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHH
Confidence            45678899999999999998  34444333221110         1223556789999999999999987   4689999


Q ss_pred             hcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHH
Q 039863          198 KEDPNLSYDANEAGETPLYLAAERGYKDVMEDILST-CESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLL  276 (563)
Q Consensus       198 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll  276 (563)
                      +.|.+++...+..|.||||+|+..++.+++++|+.. +++++..+..|.||||+|+..+            +.+++++|+
T Consensus        79 ~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~------------~~~i~~~Ll  146 (154)
T PHA02736         79 EWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERH------------DAKMMNILR  146 (154)
T ss_pred             HcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcC------------CHHHHHHHH
Confidence            999998853336899999999999999999999984 8999999999999999999999            999999999


Q ss_pred             hc
Q 039863          277 RS  278 (563)
Q Consensus       277 ~~  278 (563)
                      +.
T Consensus       147 ~~  148 (154)
T PHA02736        147 AK  148 (154)
T ss_pred             Hc
Confidence            86


No 66 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.74  E-value=1.5e-17  Score=144.64  Aligned_cols=134  Identities=14%  Similarity=0.158  Sum_probs=98.8

Q ss_pred             HhccCCCCCCcHHHHHHHcCCHHHHHHHHhcC------CCCccccCcCCCcHHHHHHHcCCH---HHHHHHHhcCCCCCC
Q 039863          169 MLGTTNEAKDTALHEAVRYNQVDVVKMLTKED------PNLSYDANEAGETPLYLAAERGYK---DVMEDILSTCESPVD  239 (563)
Q Consensus       169 ~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~------~~~~~~~~~~g~tpL~~A~~~g~~---~~v~~Ll~~~~~~~~  239 (563)
                      ..+..|..|.||||+|++.|+.  +..+...+      +......|..|.||||+|+..|+.   +++++|++.|++++.
T Consensus         9 ~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~   86 (154)
T PHA02736          9 FASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADING   86 (154)
T ss_pred             HHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccc
Confidence            4556788899999999999984  33322211      111223567788888888888876   457788888888887


Q ss_pred             CC-CCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCC
Q 039863          240 HG-PMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISA  317 (563)
Q Consensus       240 ~~-~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~  317 (563)
                      .+ ..|.||||+|+..+            +.+++++|+.. .+.+++..+..|.||||+|+..|+.+++++|++.|++.
T Consensus        87 ~~~~~g~T~Lh~A~~~~------------~~~i~~~Ll~~-~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         87 KERVFGNTPLHIAVYTQ------------NYELATWLCNQ-PGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             cCCCCCCcHHHHHHHhC------------CHHHHHHHHhC-CCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            76 47888888888887            78888888764 36777778888888888888888888888888777654


No 67 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.73  E-value=9.5e-17  Score=131.49  Aligned_cols=148  Identities=24%  Similarity=0.223  Sum_probs=126.8

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccc
Q 039863          180 ALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQ  259 (563)
Q Consensus       180 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~  259 (563)
                      .+.+|+..+....|+.|++..++....+|.++.||||.|+.+|+.+|++.|+..|+++..+...|+||||.||.-+    
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWn----  141 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWN----  141 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhccc----
Confidence            4678999999999999999999998899999999999999999999999999999999999999999999999988    


Q ss_pred             hhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChH-HHHHHHhcCCCCCccCCCCCChHHHHHHhcCCH
Q 039863          260 TYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYY-VVKELLKADISAAYKPDNEGKIPLHLAAGKGRA  338 (563)
Q Consensus       260 ~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~  338 (563)
                              +.+++..|+++  +++++.......||||.||...+.. .+.+|+....-.....+..+.||+.+|-+.+..
T Consensus       142 --------N~~va~~LLqh--gaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s  211 (228)
T KOG0512|consen  142 --------NFEVAGRLLQH--GADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMS  211 (228)
T ss_pred             --------chhHHHHHHhc--cCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhh
Confidence                    99999999997  9999999999999999999877654 455555533222245677889999999877654


Q ss_pred             HHH
Q 039863          339 YTM  341 (563)
Q Consensus       339 ~~v  341 (563)
                      .-+
T Consensus       212 ~~l  214 (228)
T KOG0512|consen  212 HYL  214 (228)
T ss_pred             HHH
Confidence            433


No 68 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.68  E-value=7.1e-17  Score=142.95  Aligned_cols=136  Identities=24%  Similarity=0.245  Sum_probs=118.6

Q ss_pred             HHHHHHcCChhhhhhhhhc---cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhH
Q 039863           33 LYEAAVEGHVGKFEEHKAV---LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENF  109 (563)
Q Consensus        33 L~~Aa~~g~~~~v~~Ll~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  109 (563)
                      ++--|+.|+--.|..-++.   +.|..|..|++|||+||.                          .|        +..+
T Consensus         4 if~wcregna~qvrlwld~tehdln~gddhgfsplhwaak--------------------------eg--------h~ai   49 (448)
T KOG0195|consen    4 IFGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAK--------------------------EG--------HVAI   49 (448)
T ss_pred             hhhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhh--------------------------cc--------cHHH
Confidence            4556778887777644444   888899999999999999                          99        9999


Q ss_pred             HHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCC
Q 039863          110 VRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQ  189 (563)
Q Consensus       110 v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~  189 (563)
                      ++.|+.+++. ++..|...+||||.|+..||.++|+.|+...++                ++..|+.|+|||||||.-|.
T Consensus        50 vemll~rgar-vn~tnmgddtplhlaaahghrdivqkll~~kad----------------vnavnehgntplhyacfwgy  112 (448)
T KOG0195|consen   50 VEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKAD----------------VNAVNEHGNTPLHYACFWGY  112 (448)
T ss_pred             HHHHHhcccc-cccccCCCCcchhhhhhcccHHHHHHHHHHhcc----------------cchhhccCCCchhhhhhhcH
Confidence            9999999988 678888889999999999999999999998887                44589999999999999999


Q ss_pred             HHHHHHHHhcCCCCccccCcCCCcHHHHHHH
Q 039863          190 VDVVKMLTKEDPNLSYDANEAGETPLYLAAE  220 (563)
Q Consensus       190 ~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~  220 (563)
                      -.+++-|+..|+.++ ..|+.|.|||..|--
T Consensus       113 dqiaedli~~ga~v~-icnk~g~tpldkakp  142 (448)
T KOG0195|consen  113 DQIAEDLISCGAAVN-ICNKKGMTPLDKAKP  142 (448)
T ss_pred             HHHHHHHHhccceee-ecccCCCCchhhhch
Confidence            999999999999887 589999999987643


No 69 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.68  E-value=5.2e-16  Score=157.15  Aligned_cols=171  Identities=26%  Similarity=0.345  Sum_probs=143.3

Q ss_pred             hhhcccCCCCcHHHHHHH---cCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHH
Q 039863          120 LLLKANAKGETLLHIAAR---HGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKML  196 (563)
Q Consensus       120 ~l~~~~~~g~t~Lh~A~~---~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~L  196 (563)
                      .++.+...|.|.||.|..   .++.++++.|++..+..           ...........|.||||.|+.+.+.++|++|
T Consensus       135 ~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~l-----------ind~~~~eeY~GqSaLHiAIv~~~~~~V~lL  203 (782)
T KOG3676|consen  135 KLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKL-----------INDIYTSEEYYGQSALHIAIVNRDAELVRLL  203 (782)
T ss_pred             ccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHH-----------hhhhhhhHhhcCcchHHHHHHhccHHHHHHH
Confidence            356678889999999987   45679999999876531           1112224567899999999999999999999


Q ss_pred             HhcCCCCccc--------cC--------------cCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhh
Q 039863          197 TKEDPNLSYD--------AN--------------EAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFR  254 (563)
Q Consensus       197 l~~~~~~~~~--------~~--------------~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~  254 (563)
                      ++.|+++...        .|              ..|+.||.+||..++.|++++|+++++|++.+|..|+|.||..+..
T Consensus       204 l~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~  283 (782)
T KOG3676|consen  204 LAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIH  283 (782)
T ss_pred             HHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHH
Confidence            9999876421        11              1478899999999999999999999999999999999999999998


Q ss_pred             ccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhc
Q 039863          255 EYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKA  313 (563)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~  313 (563)
                      -            ..+|..++++.+.......++.+|.|||..|++.|..++.+.+++.
T Consensus       284 ~------------~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  284 F------------VTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             H------------HHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            7            8999999999833333888899999999999999999999999987


No 70 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.67  E-value=6.3e-17  Score=143.30  Aligned_cols=127  Identities=31%  Similarity=0.400  Sum_probs=114.4

Q ss_pred             HHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcC
Q 039863          109 FVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYN  188 (563)
Q Consensus       109 ~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g  188 (563)
                      -|++.++....+++.-|..|.+|||+||+.||..+|+.|+..|+..+                ..|...+||||+|+..|
T Consensus        15 qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn----------------~tnmgddtplhlaaahg   78 (448)
T KOG0195|consen   15 QVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVN----------------STNMGDDTPLHLAAAHG   78 (448)
T ss_pred             EEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccc----------------cccCCCCcchhhhhhcc
Confidence            34555555555678889999999999999999999999999999854                47888899999999999


Q ss_pred             CHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 039863          189 QVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAA  252 (563)
Q Consensus       189 ~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~  252 (563)
                      |-++|+.|++..++++ ..|..|.|||||||..|+-.+++-|+..|+.++..++.|.|||..|-
T Consensus        79 hrdivqkll~~kadvn-avnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   79 HRDIVQKLLSRKADVN-AVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             cHHHHHHHHHHhcccc-hhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            9999999999999988 58999999999999999999999999999999999999999998773


No 71 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.65  E-value=2.4e-15  Score=152.45  Aligned_cols=198  Identities=21%  Similarity=0.247  Sum_probs=154.2

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHH---cCCHHHHHHHHhcCCCCcc
Q 039863          129 ETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVR---YNQVDVVKMLTKEDPNLSY  205 (563)
Q Consensus       129 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~---~g~~~iv~~Ll~~~~~~~~  205 (563)
                      +.++..|...+..+....|+..+....       ....-+-++.+..-|.|+||.|..   .++.++++.|++..|.+..
T Consensus       102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k-------~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lin  174 (782)
T KOG3676|consen  102 RDALFIADSEGALSDLDGLLKFLRKSK-------YRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLIN  174 (782)
T ss_pred             hhhhhhccccccHHHHhccchhhhhhh-------hhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhh
Confidence            367888888888888888877664211       011112355677889999999997   4556999999999886532


Q ss_pred             c----cCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC-----------------------CCCCcHHHHHHhhcccc
Q 039863          206 D----ANEAGETPLYLAAERGYKDVMEDILSTCESPVDHG-----------------------PMGRTALHAAAFREYTL  258 (563)
Q Consensus       206 ~----~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~-----------------------~~g~t~Lh~A~~~~~~~  258 (563)
                      .    ....|+||||+|+.+.+.++|++|++.|+|++.+.                       ..|..||-.|++.+   
T Consensus       175 d~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~n---  251 (782)
T KOG3676|consen  175 DIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTN---  251 (782)
T ss_pred             hhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcC---
Confidence            2    23579999999999999999999999999975411                       24778888888888   


Q ss_pred             chhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCC-CCccCCCCCChHHHHHHhcCC
Q 039863          259 QTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADIS-AAYKPDNEGKIPLHLAAGKGR  337 (563)
Q Consensus       259 ~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~g~tpL~~A~~~g~  337 (563)
                               +.+++++|+++  +++++.+|..|+|.||..+..-..++...+++.|+. ....+|..|.|||-+|++.|.
T Consensus       252 ---------q~eivrlLl~~--gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk  320 (782)
T KOG3676|consen  252 ---------QPEIVRLLLAH--GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGK  320 (782)
T ss_pred             ---------CHHHHHHHHhc--CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhh
Confidence                     88888888886  888888888888888888888788888888887776 225568888888888888888


Q ss_pred             HHHHHHHHHh
Q 039863          338 AYTMQELIRS  347 (563)
Q Consensus       338 ~~~v~~Ll~~  347 (563)
                      .++.+++++.
T Consensus       321 ~emf~~ile~  330 (782)
T KOG3676|consen  321 KEMFQHILER  330 (782)
T ss_pred             HHHHHHHHHh
Confidence            8888888887


No 72 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.62  E-value=4.6e-15  Score=115.84  Aligned_cols=89  Identities=29%  Similarity=0.450  Sum_probs=79.2

Q ss_pred             HHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCC
Q 039863          132 LHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAG  211 (563)
Q Consensus       132 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g  211 (563)
                      ||+||+.|+.+++++|++.+.+.                   +. |+||||+|+..|+.+++++|++.++++. ..+..|
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~-------------------~~-~~~~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g   59 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADI-------------------NL-GNTALHYAAENGNLEIVKLLLENGADIN-SQDKNG   59 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTT-------------------TS-SSBHHHHHHHTTTHHHHHHHHHTTTCTT--BSTTS
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCC-------------------CC-CCCHHHHHHHcCCHHHHHHHHHhccccc-ccCCCC
Confidence            79999999999999999988662                   22 8899999999999999999999999987 477899


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 039863          212 ETPLYLAAERGYKDVMEDILSTCESPVDHG  241 (563)
Q Consensus       212 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~  241 (563)
                      .||||+|+..|+.+++++|+++|++++.+|
T Consensus        60 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   60 NTALHYAAENGNLEIVKLLLEHGADVNIRN   89 (89)
T ss_dssp             SBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence            999999999999999999999999887653


No 73 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.61  E-value=2e-14  Score=120.30  Aligned_cols=124  Identities=32%  Similarity=0.508  Sum_probs=112.2

Q ss_pred             ccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 039863          124 ANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNL  203 (563)
Q Consensus       124 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  203 (563)
                      .|..|.||||+|+..|+.+++++|++.+....                ..+..|.||||.|+..++.+++++|++.++.+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~----------------~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~   66 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVN----------------AKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV   66 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCC----------------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc
Confidence            46789999999999999999999999998742                47888999999999999999999999999766


Q ss_pred             ccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHH
Q 039863          204 SYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLL  276 (563)
Q Consensus       204 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll  276 (563)
                      . ..+..+.||+|+|+..++.+++++|++.+.+.+..+..+.||++.|+..+            +.+++++|+
T Consensus        67 ~-~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~Ll  126 (126)
T cd00204          67 N-ARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG------------HLEVVKLLL  126 (126)
T ss_pred             c-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC------------CHHHHHHhC
Confidence            5 35688999999999999999999999999888888999999999999998            888888874


No 74 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.60  E-value=6.9e-15  Score=114.87  Aligned_cols=89  Identities=33%  Similarity=0.475  Sum_probs=51.6

Q ss_pred             HHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHH
Q 039863          295 LHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRT  374 (563)
Q Consensus       295 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~i  374 (563)
                      ||+|++.|+.+++++|++.+.+...     |.||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+.+++.++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~   74 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAENGNLEI   74 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHcCCHHH
Confidence            4566666666666666665544421     556666666666666666666655543 4455666666666666666666


Q ss_pred             HHHhhhCCCcccCCCCCC
Q 039863          375 VEFLLENPSLGNLMNEKN  392 (563)
Q Consensus       375 v~~Ll~~~~~~~~in~~d  392 (563)
                      +++|+++   |++++.+|
T Consensus        75 ~~~Ll~~---g~~~~~~n   89 (89)
T PF12796_consen   75 VKLLLEH---GADVNIRN   89 (89)
T ss_dssp             HHHHHHT---TT-TTSS-
T ss_pred             HHHHHHc---CCCCCCcC
Confidence            6666665   55555443


No 75 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.58  E-value=6.4e-14  Score=117.28  Aligned_cols=124  Identities=34%  Similarity=0.503  Sum_probs=90.3

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 039863          173 TNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAA  252 (563)
Q Consensus       173 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~  252 (563)
                      .|..|.||||.|+..++.+++++|++.++... ..+..|.+||+.|+..++.+++++|++.++.++..+..+.||+|.|+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~-~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVN-AKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA   81 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence            45667788888888888888888887777653 46667778888888888888888888777666666677777777777


Q ss_pred             hhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHH
Q 039863          253 FREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELL  311 (563)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll  311 (563)
                      ..+            +.+++++|++.  +...+..+..+.||+++|...++.+++++|+
T Consensus        82 ~~~------------~~~~~~~L~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          82 RNG------------NLDVVKLLLKH--GADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HcC------------cHHHHHHHHHc--CCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            777            77777777775  5556666666777777777777777666653


No 76 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.43  E-value=1.2e-12  Score=95.75  Aligned_cols=104  Identities=25%  Similarity=0.340  Sum_probs=92.2

Q ss_pred             cHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCc
Q 039863          130 TLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANE  209 (563)
Q Consensus       130 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~  209 (563)
                      --+.+++.+|..+-|+..+..|-+.+.                 -..|++|||+|+..|..+++++|+..|+++. .+|+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~-----------------~~ggR~plhyAAD~GQl~ilefli~iGA~i~-~kDK   65 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNE-----------------IYGGRTPLHYAADYGQLSILEFLISIGANIQ-DKDK   65 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHH-----------------HhCCcccchHhhhcchHHHHHHHHHhccccC-Cccc
Confidence            446789999999999999998855322                 2368999999999999999999999999998 5899


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 039863          210 AGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAA  251 (563)
Q Consensus       210 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A  251 (563)
                      .|.|||..|+..|+.++|++|+++|++-..+.++|.+.+-.+
T Consensus        66 ygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   66 YGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             cCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            999999999999999999999999999988999998877554


No 77 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.42  E-value=3.5e-13  Score=98.50  Aligned_cols=89  Identities=16%  Similarity=0.154  Sum_probs=81.2

Q ss_pred             HHHHHHHcCChhhhhhhhhccccc-cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHH
Q 039863           32 NLYEAAVEGHVGKFEEHKAVLHQI-LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFV  110 (563)
Q Consensus        32 ~L~~Aa~~g~~~~v~~Ll~~~~~~-~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v  110 (563)
                      .+.+++++|.++-|+.....|.|+ ....|++|||+|+-                          +|        +++++
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD--------------------------~G--------Ql~il   50 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAAD--------------------------YG--------QLSIL   50 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHccccHHHHhCCcccchHhhh--------------------------cc--------hHHHH
Confidence            467899999999999888887776 44589999999999                          99        99999


Q ss_pred             HHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCC
Q 039863          111 RVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPH  155 (563)
Q Consensus       111 ~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~  155 (563)
                      ++|+..+++ ++.+|+.|-|||..|+..||.++|++|+++|++..
T Consensus        51 efli~iGA~-i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt   94 (117)
T KOG4214|consen   51 EFLISIGAN-IQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRT   94 (117)
T ss_pred             HHHHHhccc-cCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccc
Confidence            999999988 78899999999999999999999999999999854


No 78 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.37  E-value=5.9e-13  Score=92.81  Aligned_cols=56  Identities=36%  Similarity=0.514  Sum_probs=31.1

Q ss_pred             HHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHH
Q 039863          344 LIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEH  402 (563)
Q Consensus       344 Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A  402 (563)
                      ||++++..++..|..|.||||+|+.+|+.+++++|++.   |++++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~---g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQN---GADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHC---T--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHC---cCCCCCCcCCCCCHHHhC
Confidence            46677677788899999999999999999999999977   889999999999999887


No 79 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.35  E-value=1.5e-11  Score=114.82  Aligned_cols=129  Identities=32%  Similarity=0.419  Sum_probs=119.8

Q ss_pred             hcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCC-----HHHHHHH
Q 039863          122 LKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQ-----VDVVKML  196 (563)
Q Consensus       122 ~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~-----~~iv~~L  196 (563)
                      ...+..+.+++|.|+..+..+++++|+..+.++.                .++..|.||||+|+..++     .++++.|
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------------~~~~~g~t~l~~a~~~~~~~~~~~~~~~~l  130 (235)
T COG0666          67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVN----------------AKDADGDTPLHLAALNGNPPEGNIEVAKLL  130 (235)
T ss_pred             ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcc----------------cccCCCCcHHHHHHhcCCcccchHHHHHHH
Confidence            4456668999999999999999999999999854                589999999999999999     9999999


Q ss_pred             HhcCC--CCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHH
Q 039863          197 TKEDP--NLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKV  274 (563)
Q Consensus       197 l~~~~--~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~  274 (563)
                      ++.+.  +.....+..|.||||+|+..|+.++++.|++.+++++..+..|.|+++.|+..+            ..++++.
T Consensus       131 l~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~------------~~~~~~~  198 (235)
T COG0666         131 LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNG------------RIELVKL  198 (235)
T ss_pred             HHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccc------------hHHHHHH
Confidence            99999  677677999999999999999999999999999999999999999999999999            9999999


Q ss_pred             HHhc
Q 039863          275 LLRS  278 (563)
Q Consensus       275 Ll~~  278 (563)
                      +++.
T Consensus       199 l~~~  202 (235)
T COG0666         199 LLDK  202 (235)
T ss_pred             HHhc
Confidence            9886


No 80 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.30  E-value=2e-10  Score=107.26  Aligned_cols=128  Identities=29%  Similarity=0.372  Sum_probs=105.4

Q ss_pred             ccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhccc-----HHHHHHHHhccC
Q 039863          206 DANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKD-----REIIKVLLRSSK  280 (563)
Q Consensus       206 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~-----~~~~~~Ll~~~~  280 (563)
                      ..+..+.++++.++..+..+++.+++..+.+++..+..|.||||.|+..+            +     .++++.|++.  
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~------------~~~~~~~~~~~~ll~~--  133 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNG------------NPPEGNIEVAKLLLEA--  133 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcC------------CcccchHHHHHHHHHc--
Confidence            45667889999999999999999999999999999999999999999998            6     7888888887  


Q ss_pred             CC---CCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhC
Q 039863          281 GT---QTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSC  348 (563)
Q Consensus       281 ~~---~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~  348 (563)
                      +.   .....+..|.||||+|+..|+.++++.|++.++++ ...+..|.|+++.|+..++.+++..++..+
T Consensus       134 g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         134 GADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADP-NSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCC-cccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            44   56666888888888888888888888888887776 444777777777777777777777777754


No 81 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.30  E-value=6.7e-12  Score=87.09  Aligned_cols=54  Identities=39%  Similarity=0.575  Sum_probs=44.8

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 039863          128 GETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLT  197 (563)
Q Consensus       128 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll  197 (563)
                      |.||||+||+.|+.+++++|++.+.+++                .+|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din----------------~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADIN----------------AQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-----------------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCC----------------CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            6899999999999999999999998744                47999999999999999999999986


No 82 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.23  E-value=2.9e-11  Score=116.25  Aligned_cols=111  Identities=20%  Similarity=0.279  Sum_probs=78.1

Q ss_pred             cHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHh
Q 039863          268 DREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRS  347 (563)
Q Consensus       268 ~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  347 (563)
                      .+++++.++..  -.|+...+.+|.|+||.|+..|+.+||++|++.|+++ +..|.+||||||+|+..+++-+++.|++.
T Consensus       562 EldlVq~~i~e--v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAASCNnv~~ckqLVe~  638 (752)
T KOG0515|consen  562 ELDLVQRIIYE--VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAASCNNVPMCKQLVES  638 (752)
T ss_pred             hHHHHHHHHHh--hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhhcCchHHHHHHHhc
Confidence            67777777664  6666777777777777777777777777777777777 55577777777777777777777777777


Q ss_pred             CCCCccccccCCChHHHHHH--HcCChHHHHHhhhC
Q 039863          348 CPSSCELVDDRGWNVFHFAA--HSGSRRTVEFLLEN  381 (563)
Q Consensus       348 ~~~~~~~~d~~g~t~Lh~A~--~~~~~~iv~~Ll~~  381 (563)
                      |+.+....-.++.|+..-+-  +-|...|.+||..-
T Consensus       639 GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  639 GAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             cceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            77666555666777665543  34667788887753


No 83 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.23  E-value=2.2e-11  Score=108.52  Aligned_cols=120  Identities=18%  Similarity=0.129  Sum_probs=110.0

Q ss_pred             HHHHHHHHHcCChhhhhhhhhc--cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhh
Q 039863           30 MDNLYEAAVEGHVGKFEEHKAV--LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGE  107 (563)
Q Consensus        30 ~~~L~~Aa~~g~~~~v~~Ll~~--~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  107 (563)
                      ..+|..++-.|+.+....||+.  .++..|+.|.|+|.-|+.                          .|        ++
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAay--------------------------kG--------nl   58 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAY--------------------------KG--------NL   58 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHh--------------------------cC--------cH
Confidence            3499999999999999999997  688899999999999999                          99        99


Q ss_pred             hHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHc
Q 039863          108 NFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRY  187 (563)
Q Consensus       108 ~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~  187 (563)
                      ++|++|++.+.+....++..+.||||.|+..|+.++.+.|++.|+....                .|.-|+|+-.+|+.-
T Consensus        59 ~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~----------------vNsvgrTAaqmAAFV  122 (396)
T KOG1710|consen   59 TLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYL----------------VNSVGRTAAQMAAFV  122 (396)
T ss_pred             HHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccc----------------ccchhhhHHHHHHHh
Confidence            9999999999998888889999999999999999999999999998554                788899999999999


Q ss_pred             CCHHHHHHHHhc
Q 039863          188 NQVDVVKMLTKE  199 (563)
Q Consensus       188 g~~~iv~~Ll~~  199 (563)
                      |+.++|..+=+.
T Consensus       123 G~H~CV~iINN~  134 (396)
T KOG1710|consen  123 GHHECVAIINNH  134 (396)
T ss_pred             cchHHHHHHhcc
Confidence            999999876543


No 84 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.22  E-value=2.6e-11  Score=84.08  Aligned_cols=54  Identities=33%  Similarity=0.546  Sum_probs=30.9

Q ss_pred             CChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhh
Q 039863          325 GKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLL  379 (563)
Q Consensus       325 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll  379 (563)
                      |.||||+|+..|+.+++++|++.+.+. +.+|.+|+||||+|+.+|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            456666666666666666666665443 555666666666666666666666664


No 85 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.22  E-value=8.6e-11  Score=125.60  Aligned_cols=106  Identities=22%  Similarity=0.281  Sum_probs=93.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCc
Q 039863          130 TLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANE  209 (563)
Q Consensus       130 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~  209 (563)
                      +.|+.|+..|+.++|+.|++.|++++                .+|..|.||||+|+..|+.+++++|++.|++++ ..|.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin----------------~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn-~~d~  146 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPN----------------CRDYDGRTPLHIACANGHVQVVRVLLEFGADPT-LLDK  146 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCC----------------CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCC
Confidence            35889999999999999999998854                478899999999999999999999999999987 4788


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhc-------CCCCCCCCCCCCcHHHHHH
Q 039863          210 AGETPLYLAAERGYKDVMEDILST-------CESPVDHGPMGRTALHAAA  252 (563)
Q Consensus       210 ~g~tpL~~A~~~g~~~~v~~Ll~~-------~~~~~~~~~~g~t~Lh~A~  252 (563)
                      .|.||||+|+..|+.+++++|+++       +++.+..+..|.+|+..+.
T Consensus       147 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        147 DGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             CCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            999999999999999999999998       6777667777777765554


No 86 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.22  E-value=1.3e-11  Score=86.02  Aligned_cols=56  Identities=34%  Similarity=0.512  Sum_probs=32.8

Q ss_pred             HHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHH
Q 039863          113 ILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEA  184 (563)
Q Consensus       113 Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A  184 (563)
                      ||+.++..++.+|..|+||||+||..|+.++|++|++.+.++.                .+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~----------------~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN----------------AKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT-------------------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC----------------CCcCCCCCHHHhC
Confidence            4667766788999999999999999999999999999998854                5999999999987


No 87 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21  E-value=6.1e-11  Score=114.10  Aligned_cols=111  Identities=26%  Similarity=0.265  Sum_probs=88.8

Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHH
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAV  185 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~  185 (563)
                      -+++|+-++.+-.+ ....|..|-|+||-|+-.||.+||++|++.|+++                +..|.+|+||||+|+
T Consensus       562 EldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganV----------------Na~DSdGWTPLHCAA  624 (752)
T KOG0515|consen  562 ELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGANV----------------NAADSDGWTPLHCAA  624 (752)
T ss_pred             hHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcc----------------cCccCCCCchhhhhh
Confidence            88888888866544 5667888999999999999999999999999884                458888999999999


Q ss_pred             HcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHH--HcCCHHHHHHHHhc
Q 039863          186 RYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAA--ERGYKDVMEDILST  233 (563)
Q Consensus       186 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~  233 (563)
                      .++++.+++.|++.|+-+....-.++.|+..-+-  +.|+.++.+||..-
T Consensus       625 SCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  625 SCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             hcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            9999999999999888776555566777776543  45788888888764


No 88 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.18  E-value=2.2e-10  Score=102.26  Aligned_cols=111  Identities=21%  Similarity=0.236  Sum_probs=103.3

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccC
Q 039863          129 ETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDAN  208 (563)
Q Consensus       129 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~  208 (563)
                      ..||.-++..|..+-...|+..-.+                ++..|..|.++|..|+..|+.++|+.|++.|++++....
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~vr~----------------vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qh   76 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTVRQ----------------VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQH   76 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHhhh----------------hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccc
Confidence            5789999999999999999986443                556899999999999999999999999999999999889


Q ss_pred             cCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhc
Q 039863          209 EAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFRE  255 (563)
Q Consensus       209 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~  255 (563)
                      ..+.|||++|+.+|+.++.+.|++.|+.+...+.-|+|+-..|+.-|
T Consensus        77 g~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG  123 (396)
T KOG1710|consen   77 GTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVG  123 (396)
T ss_pred             cccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999888


No 89 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.16  E-value=1.4e-10  Score=124.01  Aligned_cols=109  Identities=25%  Similarity=0.382  Sum_probs=95.7

Q ss_pred             HHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChH
Q 039863          294 PLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRR  373 (563)
Q Consensus       294 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~  373 (563)
                      .|+.|+..|+.+.++.|++.|+++ +..|..|.||||+|+..|+.+++++|++.+++. +..|..|.||||+|+.+++.+
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCcHH
Confidence            588999999999999999999888 556889999999999999999999999998775 778999999999999999999


Q ss_pred             HHHHhhhC----CCcccCCCCCCCCCChHHHHHHH
Q 039863          374 TVEFLLEN----PSLGNLMNEKNYDGNTPLLEHAV  404 (563)
Q Consensus       374 iv~~Ll~~----~~~~~~in~~d~~G~TpLh~A~~  404 (563)
                      ++++|+++    ...+++.+..+..|.+|+..+..
T Consensus       163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~~  197 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDSP  197 (664)
T ss_pred             HHHHHHhCCCcccccCCCCCccccCCCCccchhhh
Confidence            99999987    34477888888888888766653


No 90 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.60  E-value=9.6e-08  Score=93.13  Aligned_cols=103  Identities=27%  Similarity=0.332  Sum_probs=92.1

Q ss_pred             HhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHH
Q 039863          115 EMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVK  194 (563)
Q Consensus       115 ~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~  194 (563)
                      ..+.+ +..++.+..|.||+|+..|+-++|+|++++|+.              .++++.++.|.|+||.|+..++-.+.+
T Consensus       887 ~~gg~-ll~~~~~~~sllh~a~~tg~~eivkyildh~p~--------------elld~~de~get~lhkaa~~~~r~vc~  951 (1004)
T KOG0782|consen  887 LNGGS-LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS--------------ELLDMADETGETALHKAACQRNRAVCQ  951 (1004)
T ss_pred             hcCCc-eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH--------------HHHHHHhhhhhHHHHHHHHhcchHHHH
Confidence            34444 456788889999999999999999999999975              478889999999999999999999999


Q ss_pred             HHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhc
Q 039863          195 MLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILST  233 (563)
Q Consensus       195 ~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  233 (563)
                      +|++.|+.+. ..|..|.||-..|-..|..+++.||-+.
T Consensus       952 ~lvdagasl~-ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  952 LLVDAGASLR-KTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHhcchhhe-ecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999987 5889999999999999999999998765


No 91 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.60  E-value=6.4e-08  Score=98.63  Aligned_cols=103  Identities=19%  Similarity=0.263  Sum_probs=86.7

Q ss_pred             HHHcCChhhhhhhhhc----cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhHHH
Q 039863           36 AAVEGHVGKFEEHKAV----LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENFVR  111 (563)
Q Consensus        36 Aa~~g~~~~v~~Ll~~----~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~  111 (563)
                      +...|..+.++.+++.    -++++|..|+|+||+|+.                          .|        ..++++
T Consensus        24 ~~tKs~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S--------------------------~~--------k~~~l~   69 (1267)
T KOG0783|consen   24 SKTKSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVS--------------------------EN--------KNSFLR   69 (1267)
T ss_pred             hhhcCChhHHHHHHHHhhhhhhhHHHhhccceeeeeec--------------------------cc--------hhHHHH
Confidence            3344555556666654    477799999999999999                          99        999999


Q ss_pred             HHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcC
Q 039863          112 VILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYN  188 (563)
Q Consensus       112 ~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g  188 (563)
                      ||+++|.+++-+--.+|.||||-|+.+|+.|++..|+.+|..                +..+|++|..||..-++-.
T Consensus        70 wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S----------------L~i~Dkeglsplq~~~r~~  130 (1267)
T KOG0783|consen   70 WLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS----------------LRIKDKEGLSPLQFLSRVL  130 (1267)
T ss_pred             HHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc----------------eEEecccCCCHHHHHhhcc
Confidence            999999886666667899999999999999999999999976                6679999999999887743


No 92 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.59  E-value=9.1e-08  Score=93.27  Aligned_cols=118  Identities=24%  Similarity=0.316  Sum_probs=102.4

Q ss_pred             HHHHHHHcCChhhhhhhhhc--cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhhhhhH
Q 039863           32 NLYEAAVEGHVGKFEEHKAV--LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIRGENF  109 (563)
Q Consensus        32 ~L~~Aa~~g~~~~v~~Ll~~--~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  109 (563)
                      .|..|+..+++=-++....+  ..-+.+++..+.||+|+.                          .|        +-++
T Consensus       869 eil~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~--------------------------tg--------~~ei  914 (1004)
T KOG0782|consen  869 EILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAK--------------------------TG--------NGEI  914 (1004)
T ss_pred             HHHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHh--------------------------cC--------ChHH
Confidence            57888888886655554444  344488889999999999                          99        9999


Q ss_pred             HHHHHHhCch-hhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcC
Q 039863          110 VRVILEMCPI-LLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYN  188 (563)
Q Consensus       110 v~~Ll~~~~~-~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g  188 (563)
                      |+||++++|. ++...+..|.|+||.|+..++..+..+|++.|+.                +...|..|.||-.-|-+.|
T Consensus       915 vkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagas----------------l~ktd~kg~tp~eraqqa~  978 (1004)
T KOG0782|consen  915 VKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGAS----------------LRKTDSKGKTPQERAQQAG  978 (1004)
T ss_pred             HHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchh----------------heecccCCCChHHHHHhcC
Confidence            9999999986 6678889999999999999999999999999987                5568999999999999999


Q ss_pred             CHHHHHHHHhc
Q 039863          189 QVDVVKMLTKE  199 (563)
Q Consensus       189 ~~~iv~~Ll~~  199 (563)
                      ..+++-||-.+
T Consensus       979 d~dlaayle~r  989 (1004)
T KOG0782|consen  979 DPDLAAYLESR  989 (1004)
T ss_pred             CchHHHHHhhh
Confidence            99999998765


No 93 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.58  E-value=7.6e-08  Score=56.79  Aligned_cols=29  Identities=38%  Similarity=0.588  Sum_probs=26.6

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHhcCCCC
Q 039863          127 KGETLLHIAARHGHYDIVKVLIAECKKPH  155 (563)
Q Consensus       127 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~  155 (563)
                      +|+||||+||+.|+.++|++|+++|++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            48999999999999999999999998753


No 94 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.56  E-value=3.7e-08  Score=100.26  Aligned_cols=94  Identities=21%  Similarity=0.245  Sum_probs=78.2

Q ss_pred             HHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccc-cCCChHHHHHHHcCChHHHHHhhhCCCccc
Q 039863          308 KELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVD-DRGWNVFHFAAHSGSRRTVEFLLENPSLGN  386 (563)
Q Consensus       308 ~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~  386 (563)
                      .++-+.+....+.+|..|+++||+|+..+..++++||+++|.+. ..+| ..|+||||-|+.+|+.+++.+||++   |+
T Consensus        35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv-~vqD~ESG~taLHRaiyyG~idca~lLL~~---g~  110 (1267)
T KOG0783|consen   35 GFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDV-FVQDEESGYTALHRAIYYGNIDCASLLLSK---GR  110 (1267)
T ss_pred             HHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCcee-eeccccccchHhhHhhhhchHHHHHHHHhc---CC
Confidence            34445555666778899999999999999999999999997776 4455 4689999999999999999999998   78


Q ss_pred             CCCCCCCCCChHHHHHHHc
Q 039863          387 LMNEKNYDGNTPLLEHAVS  405 (563)
Q Consensus       387 ~in~~d~~G~TpLh~A~~~  405 (563)
                      .+..+|++|..||.+..+-
T Consensus       111 SL~i~Dkeglsplq~~~r~  129 (1267)
T KOG0783|consen  111 SLRIKDKEGLSPLQFLSRV  129 (1267)
T ss_pred             ceEEecccCCCHHHHHhhc
Confidence            8899999999999988874


No 95 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.50  E-value=1.4e-07  Score=90.36  Aligned_cols=91  Identities=20%  Similarity=0.214  Sum_probs=81.2

Q ss_pred             hhHHHHHHHHHcCChhhhhhhhhc--cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCchhhhhh
Q 039863           28 QLMDNLYEAAVEGHVGKFEEHKAV--LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDDREVIR  105 (563)
Q Consensus        28 ~~~~~L~~Aa~~g~~~~v~~Ll~~--~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  105 (563)
                      .....+.+||+.|++..++.+.=.  +....|.+.+|+||.||.                          .|        
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAa--------------------------EG--------  550 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAA--------------------------EG--------  550 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecc--------------------------cC--------
Confidence            334499999999999999966555  566689999999999999                          99        


Q ss_pred             hhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcC
Q 039863          106 GENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECK  152 (563)
Q Consensus       106 ~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~  152 (563)
                      +.+++++|++.+....+..|..|+|||.-|...+|.+++++|-+...
T Consensus       551 ~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  551 HVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             ceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence            99999999999888888999999999999999999999999988654


No 96 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.40  E-value=3.5e-07  Score=53.95  Aligned_cols=29  Identities=38%  Similarity=0.605  Sum_probs=18.7

Q ss_pred             CCChHHHHHHHcCChHHHHHhhhCCCcccCCC
Q 039863          358 RGWNVFHFAAHSGSRRTVEFLLENPSLGNLMN  389 (563)
Q Consensus       358 ~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in  389 (563)
                      +|+||||+|+.+|+.+++++|+++   |+++|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~---gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEH---GADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHc---CCCCC
Confidence            366666666666666666666666   55554


No 97 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.39  E-value=1.6e-06  Score=83.57  Aligned_cols=86  Identities=23%  Similarity=0.210  Sum_probs=79.0

Q ss_pred             ccCCCCCCcH------HHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q 039863          171 GTTNEAKDTA------LHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMG  244 (563)
Q Consensus       171 ~~~~~~g~t~------L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g  244 (563)
                      ..+|.+|.+.      ||..++.|+.+..-.|+..|++.++.-...|.||||+|++.|+..=++.|+-+|+++...|.+|
T Consensus       121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~G  200 (669)
T KOG0818|consen  121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSG  200 (669)
T ss_pred             CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCC
Confidence            3566666554      8999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             CcHHHHHHhhcc
Q 039863          245 RTALHAAAFREY  256 (563)
Q Consensus       245 ~t~Lh~A~~~~~  256 (563)
                      .||+.+|-..||
T Consensus       201 mtP~~~AR~~gH  212 (669)
T KOG0818|consen  201 MTPVDYARQGGH  212 (669)
T ss_pred             CcHHHHHHhcCc
Confidence            999999999994


No 98 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.35  E-value=6.2e-07  Score=54.60  Aligned_cols=32  Identities=31%  Similarity=0.578  Sum_probs=23.8

Q ss_pred             CCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCC
Q 039863          358 RGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKN  392 (563)
Q Consensus       358 ~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d  392 (563)
                      +|+||||+|+.+++.+++++|++.   |++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~---ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKH---GADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHT---TSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHC---cCCCCCCC
Confidence            467777777777777777777776   67777665


No 99 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.30  E-value=1e-06  Score=53.67  Aligned_cols=30  Identities=43%  Similarity=0.604  Sum_probs=27.6

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHhcCCCCC
Q 039863          127 KGETLLHIAARHGHYDIVKVLIAECKKPHQ  156 (563)
Q Consensus       127 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~  156 (563)
                      +|.||||+||..|+.++|++|++.|+++..
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~   30 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA   30 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence            589999999999999999999999998654


No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.28  E-value=8.7e-07  Score=84.98  Aligned_cols=90  Identities=20%  Similarity=0.289  Sum_probs=55.8

Q ss_pred             CCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcC
Q 039863          291 GWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSG  370 (563)
Q Consensus       291 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~  370 (563)
                      +..++.+|+..|++..++.+.-.|.+. ..+|.+.+|+||.|+..|+++++++|++.+.......|..|+|||.-|...+
T Consensus       506 ~~i~~~~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~  584 (622)
T KOG0506|consen  506 TVINVMYAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFK  584 (622)
T ss_pred             chhhhhhhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcC
Confidence            344566666666666666655555555 4446666666666666666666666666666655666666666666666666


Q ss_pred             ChHHHHHhhhC
Q 039863          371 SRRTVEFLLEN  381 (563)
Q Consensus       371 ~~~iv~~Ll~~  381 (563)
                      |.+++++|-+.
T Consensus       585 h~~v~k~L~~~  595 (622)
T KOG0506|consen  585 HKEVVKLLEEA  595 (622)
T ss_pred             cHHHHHHHHHH
Confidence            66666666554


No 101
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.27  E-value=3.2e-06  Score=81.60  Aligned_cols=86  Identities=26%  Similarity=0.347  Sum_probs=78.9

Q ss_pred             HHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChH
Q 039863          294 PLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRR  373 (563)
Q Consensus       294 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~  373 (563)
                      -||..++.|+.+..-.|+..|++.++.....|.||||.|++.|+..-++.|+-+|++. ...|.+|.||+.+|-..||-+
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~GmtP~~~AR~~gH~~  214 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-GAQDSSGMTPVDYARQGGHHE  214 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC-CCCCCCCCcHHHHHHhcCchH
Confidence            5999999999999999999999999998999999999999999999999999998887 779999999999999999987


Q ss_pred             HHHHhhh
Q 039863          374 TVEFLLE  380 (563)
Q Consensus       374 iv~~Ll~  380 (563)
                      +.+-|++
T Consensus       215 laeRl~e  221 (669)
T KOG0818|consen  215 LAERLVE  221 (669)
T ss_pred             HHHHHHH
Confidence            7766654


No 102
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.16  E-value=4.5e-06  Score=81.72  Aligned_cols=78  Identities=21%  Similarity=0.372  Sum_probs=65.8

Q ss_pred             hhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHH
Q 039863          107 ENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVR  186 (563)
Q Consensus       107 ~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~  186 (563)
                      ..+.+.+..+-...+..+|..|.||||.|+..||.+.++.|+..+++.                ..+|..|++|||.|+.
T Consensus        34 ~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv----------------~~kN~~gWs~L~EAv~   97 (560)
T KOG0522|consen   34 DSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV----------------SIKNNEGWSPLHEAVS   97 (560)
T ss_pred             hhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc----------------cccccccccHHHHHHH
Confidence            334455554444567889999999999999999999999999999984                4599999999999999


Q ss_pred             cCCHHHHHHHHhcC
Q 039863          187 YNQVDVVKMLTKED  200 (563)
Q Consensus       187 ~g~~~iv~~Ll~~~  200 (563)
                      .|+.+++..++.+.
T Consensus        98 ~g~~q~i~~vlr~~  111 (560)
T KOG0522|consen   98 TGNEQIITEVLRHL  111 (560)
T ss_pred             cCCHHHHHHHHHHh
Confidence            99999999888764


No 103
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.14  E-value=3.1e-05  Score=80.61  Aligned_cols=125  Identities=22%  Similarity=0.230  Sum_probs=99.5

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccc
Q 039863          127 KGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYD  206 (563)
Q Consensus       127 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~  206 (563)
                      .+.--...||..|+.-.|+..++......            ..++..|.-|.++|+.|+.+.+.+++++|++.....   
T Consensus        24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~------------lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~---   88 (822)
T KOG3609|consen   24 EGEKGFLLAHENGDVPLVAKALEYKAVSK------------LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE---   88 (822)
T ss_pred             hhhHHHHHHHHcCChHHHHHHHHhccccc------------cchhccChHhhhceecccccccHHHHHHHhcCcccc---
Confidence            34455778999999999999999766521            236778999999999999999999999999765332   


Q ss_pred             cCcCCCcHHHHHHHcCCHHHHHHHHhcCCCC----------CCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHH
Q 039863          207 ANEAGETPLYLAAERGYKDVMEDILSTCESP----------VDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLL  276 (563)
Q Consensus       207 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~----------~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll  276 (563)
                           ..+|.+|+..|..+.|+.++.+-...          ...-..+.|||.+|+..+            ++|+++.|+
T Consensus        89 -----gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~N------------nyEil~~Ll  151 (822)
T KOG3609|consen   89 -----GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLN------------NFEILQCLL  151 (822)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhc------------chHHHHHHH
Confidence                 57899999999999999999875332          123345789999999988            999999999


Q ss_pred             hccCCCCCc
Q 039863          277 RSSKGTQTT  285 (563)
Q Consensus       277 ~~~~~~~~~  285 (563)
                      ++  +..+.
T Consensus       152 ~k--g~~i~  158 (822)
T KOG3609|consen  152 TR--GHCIP  158 (822)
T ss_pred             Hc--CCCCC
Confidence            87  44443


No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.14  E-value=6.6e-06  Score=80.62  Aligned_cols=91  Identities=30%  Similarity=0.395  Sum_probs=74.1

Q ss_pred             cHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCC
Q 039863          246 TALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEG  325 (563)
Q Consensus       246 t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g  325 (563)
                      -|+|.++...            ..+-+..++...-...+...|..|.||||.|+..|+.+.++.|+..++++ ..+|..|
T Consensus        22 ~~lh~~~~~~------------~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~g   88 (560)
T KOG0522|consen   22 KPLHWAVVTT------------DSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEG   88 (560)
T ss_pred             cccchhhhcc------------chhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-ccccccc
Confidence            3578887665            44444333332146778889999999999999999999999999999988 5679999


Q ss_pred             ChHHHHHHhcCCHHHHHHHHHhCC
Q 039863          326 KIPLHLAAGKGRAYTMQELIRSCP  349 (563)
Q Consensus       326 ~tpL~~A~~~g~~~~v~~Ll~~~~  349 (563)
                      ++|||.|+..|+.+++..++.+..
T Consensus        89 Ws~L~EAv~~g~~q~i~~vlr~~~  112 (560)
T KOG0522|consen   89 WSPLHEAVSTGNEQIITEVLRHLK  112 (560)
T ss_pred             ccHHHHHHHcCCHHHHHHHHHHhH
Confidence            999999999999999999988754


No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.09  E-value=1.1e-05  Score=83.86  Aligned_cols=130  Identities=15%  Similarity=0.102  Sum_probs=99.9

Q ss_pred             hhhHHHHHHHHHcCChhhhhhhhhc------cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCCch
Q 039863           27 IQLMDNLYEAAVEGHVGKFEEHKAV------LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSSDD  100 (563)
Q Consensus        27 ~~~~~~L~~Aa~~g~~~~v~~Ll~~------~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  100 (563)
                      ..+......|+..|+.-.|+..++.      .+|..|+-|+++|++|..                          +-   
T Consensus        23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~--------------------------ne---   73 (822)
T KOG3609|consen   23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAID--------------------------NE---   73 (822)
T ss_pred             chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccc--------------------------cc---
Confidence            3344477899999999999988886      456699999999999999                          88   


Q ss_pred             hhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcH
Q 039863          101 REVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTA  180 (563)
Q Consensus       101 ~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~  180 (563)
                           +.|+.++|++.....        .-+|.+|+..|..++|+.++.+-........      ....-...-..+.||
T Consensus        74 -----nle~~eLLl~~~~~~--------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~------~~d~~~~~ft~ditP  134 (822)
T KOG3609|consen   74 -----NLELQELLLDTSSEE--------GDALLLAIAVGSVPLVELLLVHFVDAPYLER------SGDANSPHFTPDITP  134 (822)
T ss_pred             -----cHHHHHHHhcCcccc--------chHHHHHHHHHHHHHHHHHHhcccccchhcc------ccccCcccCCCCccH
Confidence                 999999999875431        3579999999999999999987554322110      000001123346799


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCc
Q 039863          181 LHEAVRYNQVDVVKMLTKEDPNLS  204 (563)
Q Consensus       181 L~~A~~~g~~~iv~~Ll~~~~~~~  204 (563)
                      |.+||..++.||++.|+++|..+.
T Consensus       135 liLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen  135 LMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             HHHHHHhcchHHHHHHHHcCCCCC
Confidence            999999999999999999987653


No 106
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.04  E-value=8.9e-06  Score=80.11  Aligned_cols=98  Identities=15%  Similarity=0.092  Sum_probs=82.6

Q ss_pred             hhhhchhhHHHHHHHHHcCChhhhhhhhhccccc------cCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhcc
Q 039863           22 VREKNIQLMDNLYEAAVEGHVGKFEEHKAVLHQI------LTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQ   95 (563)
Q Consensus        22 ~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~------~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (563)
                      ++.....--..|..|+...++..+-.||.+|-..      .+.+|.|+||+||+                          
T Consensus       617 l~~te~~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~--------------------------  670 (749)
T KOG0705|consen  617 LPCTEEPLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAAR--------------------------  670 (749)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhh--------------------------
Confidence            3333333333889999999999999999985332      56778999999999                          


Q ss_pred             CCCchhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCC
Q 039863           96 SSSDDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKP  154 (563)
Q Consensus        96 ~g~~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~  154 (563)
                      .|        +..+.++|+-.+.+ ...+|..|+|+|.||-.+|..+++..|+.+|...
T Consensus       671 ~g--------nVvl~QLLiWyg~d-v~~rda~g~t~l~yar~a~sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  671 KG--------NVVLAQLLIWYGVD-VMARDAHGRTALFYARQAGSQECIDVLLQYGCPD  720 (749)
T ss_pred             hc--------chhHHHHHHHhCcc-ceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence            99        99999999988777 6789999999999999999999999999999764


No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.91  E-value=4.3e-05  Score=75.50  Aligned_cols=93  Identities=19%  Similarity=0.201  Sum_probs=79.5

Q ss_pred             HHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcC
Q 039863          131 LLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEA  210 (563)
Q Consensus       131 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~  210 (563)
                      -|.-|+...++..+-+||.+|.....            .-...+.+|+|+||+|++.|++.+.++|+=.+.+.. .+|..
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~------------~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~-~rda~  693 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEV------------NETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM-ARDAH  693 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhh------------hccccCCCCcchhhhhhhhcchhHHHHHHHhCccce-ecccC
Confidence            46678888899999999999876432            112356778999999999999999999998888876 58999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCC
Q 039863          211 GETPLYLAAERGYKDVMEDILSTCES  236 (563)
Q Consensus       211 g~tpL~~A~~~g~~~~v~~Ll~~~~~  236 (563)
                      |.|+|.||-..|..+++..|+++|..
T Consensus       694 g~t~l~yar~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  694 GRTALFYARQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             CchhhhhHhhcccHHHHHHHHHcCCC
Confidence            99999999999999999999999854


No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.85  E-value=0.00011  Score=68.91  Aligned_cols=73  Identities=27%  Similarity=0.301  Sum_probs=65.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 039863          179 TALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAA  252 (563)
Q Consensus       179 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~  252 (563)
                      --|.+||+.|.++.|++|++.|.+++ ..|....+||++|+..||.++|++|+++|+-......+|..++.-|.
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN-~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~YgaL  110 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVN-AVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGAL  110 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcc-hhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhhh
Confidence            45899999999999999999999988 58999999999999999999999999999988777777887776665


No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.82  E-value=1.9e-05  Score=84.54  Aligned_cols=78  Identities=29%  Similarity=0.408  Sum_probs=71.8

Q ss_pred             cCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC-CchhhhccCcccCccccccCCCCHHHHHH
Q 039863          357 DRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG-SFIKSFVCHPKVDRLAFNHQNNSAEDIIR  435 (563)
Q Consensus       357 ~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~-~~~~~~l~~~g~d~~~~n~~g~t~l~~a~  435 (563)
                      ..|.|+||.|+.++...++++|+++   |+++|..|..|+||||.+...| ...+.+++++|+++++.+.+|.+|+++|.
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~---ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~  730 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQN---GADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAM  730 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhc---CCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHh
Confidence            4578999999999999999999999   8899999999999999999999 44668888999999999999999999997


Q ss_pred             hc
Q 039863          436 SK  437 (563)
Q Consensus       436 ~~  437 (563)
                      ..
T Consensus       731 ~~  732 (785)
T KOG0521|consen  731 EA  732 (785)
T ss_pred             hh
Confidence            65


No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.66  E-value=2.8e-05  Score=82.63  Aligned_cols=133  Identities=17%  Similarity=0.067  Sum_probs=106.8

Q ss_pred             hhhhchhhHHHHHHHHHcCChhhhhhhhhc---cccccCCCCCceeeeecccCCCCCCCCCCccchhHHHHhhhhccCCC
Q 039863           22 VREKNIQLMDNLYEAAVEGHVGKFEEHKAV---LHQILTPNENTILHIHITALPNKTMKPNNKANSLWRMISTFKKQSSS   98 (563)
Q Consensus        22 ~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   98 (563)
                      ......++|+.+|.++..|..-.++.+++.   +....+..|.-.+|+ |.                          .+ 
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca--------------------------~l-  618 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CA--------------------------AL-  618 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hh--------------------------hc-
Confidence            455778889999999999999999999985   455577788888898 44                          56 


Q ss_pred             chhhhhhhhhHHHHHHHhCchhhhcccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCC
Q 039863           99 DDREVIRGENFVRVILEMCPILLLKANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKD  178 (563)
Q Consensus        99 ~~~~~~~~~~~v~~Ll~~~~~~l~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~  178 (563)
                             +.+.+-+++.-....++.+|..|+||||+|+..|+..++..|++.|+.+.....          .......|.
T Consensus       619 -------g~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~td----------ps~~~p~g~  681 (975)
T KOG0520|consen  619 -------GYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTD----------PSPETPGGK  681 (975)
T ss_pred             -------CCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccC----------CCCCCCCCC
Confidence                   788887777666666888999999999999999999999999999988653110          123455688


Q ss_pred             cHHHHHHHcCCHHHHHHHHhc
Q 039863          179 TALHEAVRYNQVDVVKMLTKE  199 (563)
Q Consensus       179 t~L~~A~~~g~~~iv~~Ll~~  199 (563)
                      |+-..|-.+|+..+.-+|-+.
T Consensus       682 ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  682 TAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             chhhhhhcccccchHHHHhhh
Confidence            999999999998888887765


No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.55  E-value=0.00021  Score=67.13  Aligned_cols=69  Identities=25%  Similarity=0.264  Sum_probs=57.4

Q ss_pred             cHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCc
Q 039863          130 TLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANE  209 (563)
Q Consensus       130 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~  209 (563)
                      --|..||+.|..+.|++|++.|.+.+                ..|....+||.+|+..||.++|++|+++|+-..  ++.
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN----------------~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~--rdt   99 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVN----------------AVDRFDSSPLYLASLCGHEDVVKLLLENGAICS--RDT   99 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcc----------------hhhcccccHHHHHHHcCcHHHHHHHHHcCCccc--ccc
Confidence            45889999999999999999998854                588888999999999999999999999998654  343


Q ss_pred             -CCCcHHH
Q 039863          210 -AGETPLY  216 (563)
Q Consensus       210 -~g~tpL~  216 (563)
                       .|...++
T Consensus       100 f~G~RC~Y  107 (516)
T KOG0511|consen  100 FDGDRCHY  107 (516)
T ss_pred             cCcchhhh
Confidence             4444443


No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.54  E-value=0.00022  Score=60.63  Aligned_cols=71  Identities=21%  Similarity=0.195  Sum_probs=62.2

Q ss_pred             CCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCC
Q 039863          281 GTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSS  351 (563)
Q Consensus       281 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~  351 (563)
                      ..+++.+|..|||++++|+..|+.+.+.+|+.+|....-..|..|.+++.+|-+.|..+++..|.+...+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            45678899999999999999999999999999996665778999999999999999999999998876554


No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.52  E-value=8.8e-05  Score=79.52  Aligned_cols=80  Identities=26%  Similarity=0.341  Sum_probs=75.1

Q ss_pred             CCCChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHH
Q 039863          323 NEGKIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEH  402 (563)
Q Consensus       323 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A  402 (563)
                      ..|.++||.|+..|..-+++.|++.+.+ ++.+|..|+||||.+...|+...+..|+++   |++.+..|.+|.+||++|
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~---~a~~~a~~~~~~~~l~~a  729 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKR---GADPNAFDPDGKLPLDIA  729 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhccc---cccccccCccCcchhhHH
Confidence            3578999999999999999999999988 588999999999999999999999999998   899999999999999999


Q ss_pred             HHcC
Q 039863          403 AVSG  406 (563)
Q Consensus       403 ~~~~  406 (563)
                      ....
T Consensus       730 ~~~~  733 (785)
T KOG0521|consen  730 MEAA  733 (785)
T ss_pred             hhhc
Confidence            8765


No 114
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.43  E-value=0.0004  Score=59.10  Aligned_cols=70  Identities=14%  Similarity=0.089  Sum_probs=62.6

Q ss_pred             hccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 039863          170 LGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVD  239 (563)
Q Consensus       170 l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~  239 (563)
                      ++.+|..|+|+|+.|+..|+.+.+.||+.+|.-.....+..+.+++.+|-+.|..+++..|.+...+...
T Consensus         5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~   74 (223)
T KOG2384|consen    5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSH   74 (223)
T ss_pred             ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCC
Confidence            5678999999999999999999999999999666668999999999999999999999999998644433


No 115
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.37  E-value=0.00023  Score=76.03  Aligned_cols=125  Identities=24%  Similarity=0.262  Sum_probs=68.1

Q ss_pred             cCcCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCCc
Q 039863          207 ANEAGETPLYLAAERGYKDVMEDILST-CESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTT  285 (563)
Q Consensus       207 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~  285 (563)
                      ....|.+.+|+++..++.-.++.+++- +......+.+|...+|+++..             +.+.+-+|+.. .+..++
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~l-------------g~ewA~ll~~~-~~~ai~  635 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAAL-------------GYEWAFLPISA-DGVAID  635 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhc-------------CCceeEEEEee-cccccc
Confidence            344556666666666666666666654 444444555566666664433             23333344433 455566


Q ss_pred             cCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCC-----CCCChHHHHHHhcCCHHHHHHHH
Q 039863          286 KPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPD-----NEGKIPLHLAAGKGRAYTMQELI  345 (563)
Q Consensus       286 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~-----~~g~tpL~~A~~~g~~~~v~~Ll  345 (563)
                      .+|..|+||||+|+..|+..++..|...+.......|     ..|.|+-..|..+|+..+.-+|-
T Consensus       636 i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~ls  700 (975)
T KOG0520|consen  636 IRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLS  700 (975)
T ss_pred             cccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHh
Confidence            6666666666666666666666666654443332222     23555666666666555444443


No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.35  E-value=0.0065  Score=34.71  Aligned_cols=27  Identities=37%  Similarity=0.676  Sum_probs=24.6

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHhcCC
Q 039863          127 KGETLLHIAARHGHYDIVKVLIAECKK  153 (563)
Q Consensus       127 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~  153 (563)
                      .|.||||+|+..|+.++++.|++.+.+
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            378999999999999999999998775


No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.91  E-value=0.015  Score=33.08  Aligned_cols=26  Identities=31%  Similarity=0.456  Sum_probs=17.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCC
Q 039863          177 KDTALHEAVRYNQVDVVKMLTKEDPN  202 (563)
Q Consensus       177 g~t~L~~A~~~g~~~iv~~Ll~~~~~  202 (563)
                      |.||+|+|+..++.++++.|++.+.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            45666766666666777666666543


No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.74  E-value=0.011  Score=58.10  Aligned_cols=65  Identities=17%  Similarity=0.104  Sum_probs=40.0

Q ss_pred             hHHHHHhhhCCCcc---cCCCCCCCCCChHHHHHHHcC-CchhhhccCcccCccccccCCCCHHHHHHh
Q 039863          372 RRTVEFLLENPSLG---NLMNEKNYDGNTPLLEHAVSG-SFIKSFVCHPKVDRLAFNHQNNSAEDIIRS  436 (563)
Q Consensus       372 ~~iv~~Ll~~~~~~---~~in~~d~~G~TpLh~A~~~~-~~~~~~l~~~g~d~~~~n~~g~t~l~~a~~  436 (563)
                      +..+++|.++.-.|   .-....|.---|+||+|+..+ ..++.+|++.|+|+.++|..|.||.+++..
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n  472 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSAN  472 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccccccc
Confidence            55666666662111   111223445567777777777 445566777777777777777777777663


No 119
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.44  E-value=0.15  Score=43.84  Aligned_cols=142  Identities=19%  Similarity=0.162  Sum_probs=80.0

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccc
Q 039863          180 ALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQ  259 (563)
Q Consensus       180 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~  259 (563)
                      .|..|++.+-..|++..-+....-    -...++.+..||+..+.|+|+|+-+.-.-     .+-.+.+-.|....    
T Consensus        49 Ll~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~i-----~~~~~iFdIA~~~k----  115 (192)
T PF03158_consen   49 LLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLHI-----YNPEDIFDIAFAKK----  115 (192)
T ss_pred             HHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccCC-----CCchhhhhhhhhcc----
Confidence            466788888888887776542211    12456777788888888888888543211     22334455555554    


Q ss_pred             hhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCcc-CCCCCChHHHHHHhcCCH
Q 039863          260 TYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYK-PDNEGKIPLHLAAGKGRA  338 (563)
Q Consensus       260 ~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~g~tpL~~A~~~g~~  338 (563)
                              +.++..  +..                             +.+++........ ...--..-|..|+..|-.
T Consensus       116 --------DlsLys--lGY-----------------------------~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll  156 (192)
T PF03158_consen  116 --------DLSLYS--LGY-----------------------------KLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLL  156 (192)
T ss_pred             --------chhHHH--HHH-----------------------------HHHHhhcccccccCHHHHHHHHHHHHHHCCCH
Confidence                    444311  110                             0111110000000 000001246678888888


Q ss_pred             HHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhh
Q 039863          339 YTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLE  380 (563)
Q Consensus       339 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~  380 (563)
                      ..+.+.+++|++..       .++|-.|+.+++.+++.+++.
T Consensus       157 ~F~letlkygg~~~-------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  157 PFVLETLKYGGNVD-------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHHcCCccc-------HHHHHHHHHhhHHHHHHHhhc
Confidence            88888888876542       178888888888888887764


No 120
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.06  E-value=0.21  Score=42.96  Aligned_cols=114  Identities=18%  Similarity=0.100  Sum_probs=78.5

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHH----HHhcCCCCCCCCCCCCcHHHH
Q 039863          175 EAKDTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPLYLAAERGYKDVMED----ILSTCESPVDHGPMGRTALHA  250 (563)
Q Consensus       175 ~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~----Ll~~~~~~~~~~~~g~t~Lh~  250 (563)
                      ...++.+-.||+..+.|+|+|+-+.-.-      .+-.+.+-.|....+.++...    ++++....             
T Consensus        74 ~~~q~LFElAC~~qkydiV~WI~qnL~i------~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~-------------  134 (192)
T PF03158_consen   74 YLNQELFELACEEQKYDIVKWIGQNLHI------YNPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSE-------------  134 (192)
T ss_pred             hHHHHHHHHHHHHccccHHHHHhhccCC------CCchhhhhhhhhccchhHHHHHHHHHHhhcccc-------------
Confidence            3567888899999999999999653211      123566778888888776221    11111000             


Q ss_pred             HHhhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHH
Q 039863          251 AAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLH  330 (563)
Q Consensus       251 A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~  330 (563)
                          .            +.+..-+|.+                -|..|+.+|-+..+...++.|.+.       ..+.|.
T Consensus       135 ----~------------~~d~~~ll~~----------------hl~~a~~kgll~F~letlkygg~~-------~~~vls  175 (192)
T PF03158_consen  135 ----H------------NEDPTSLLTQ----------------HLEKAAAKGLLPFVLETLKYGGNV-------DIIVLS  175 (192)
T ss_pred             ----c------------ccCHHHHHHH----------------HHHHHHHCCCHHHHHHHHHcCCcc-------cHHHHH
Confidence                0            2233333333                378899999999999999998776       238999


Q ss_pred             HHHhcCCHHHHHHHHH
Q 039863          331 LAAGKGRAYTMQELIR  346 (563)
Q Consensus       331 ~A~~~g~~~~v~~Ll~  346 (563)
                      .|+..++..++.+++.
T Consensus       176 ~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  176 QAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHhhHHHHHHHhhc
Confidence            9999999999998874


No 121
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.83  E-value=0.035  Score=54.71  Aligned_cols=66  Identities=27%  Similarity=0.308  Sum_probs=52.5

Q ss_pred             cCCHHHHHHHHHhCCCCcc-----ccccCCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHH
Q 039863          335 KGRAYTMQELIRSCPSSCE-----LVDDRGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHA  403 (563)
Q Consensus       335 ~g~~~~v~~Ll~~~~~~~~-----~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~  403 (563)
                      ......+++|.++......     ..+..--|+||+|+..|..++|.+||+.   |+|....|..|.||..++.
T Consensus       401 ~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Lee---g~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  401 KPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEE---GCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             cCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHh---cCCchhcccCCCCcccccc
Confidence            3446677777776654422     2233456999999999999999999999   8999999999999999887


No 122
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=91.75  E-value=0.26  Score=36.44  Aligned_cols=48  Identities=17%  Similarity=0.368  Sum_probs=40.7

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 039863          129 ETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKE  199 (563)
Q Consensus       129 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  199 (563)
                      ...+..|+..|+.||++.+++.+..                       ....+..|+...+.++++||++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~~~-----------------------~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKNKP-----------------------DNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHhcc-----------------------HHHHHHHHHHHhhHHHHHHHHHh
Confidence            4568999999999999999976532                       13579999999999999999986


No 123
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=90.47  E-value=1.5  Score=39.11  Aligned_cols=95  Identities=9%  Similarity=0.089  Sum_probs=66.2

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHH--cCCHHHHHHHHhcCCC---C
Q 039863          129 ETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVR--YNQVDVVKMLTKEDPN---L  203 (563)
Q Consensus       129 ~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~--~g~~~iv~~Ll~~~~~---~  203 (563)
                      .++|.+|...+..+++.+|+.+-.-..+           .+..+..  +.--+.++..  +.+..++++++++|.-   -
T Consensus       180 ~~Am~~si~~~K~dva~~lls~f~ft~~-----------dv~~~~~--~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~  246 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSKFNFTKQ-----------DVASMEK--ELYDIEYLLSEHSASYKVLEYFINRGLVDVNK  246 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhhcceecc-----------hhhhcCc--chhhHHHHHhhcCCcHHHHHHHHhccccccch
Confidence            4789999999999999999986432111           0111111  1123444443  4467899999998642   2


Q ss_pred             ccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 039863          204 SYDANEAGETPLYLAAERGYKDVMEDILSTCES  236 (563)
Q Consensus       204 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~  236 (563)
                      ....-..|.|-|.-|...++.+|+..|+++|+-
T Consensus       247 ~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  247 KFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            223446799999999999999999999999974


No 124
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=90.13  E-value=2.6  Score=37.67  Aligned_cols=44  Identities=14%  Similarity=0.123  Sum_probs=32.3

Q ss_pred             HHHHHHHHHhCCCCcc---ccccCCChHHHHHHHcCChHHHHHhhhC
Q 039863          338 AYTMQELIRSCPSSCE---LVDDRGWNVFHFAAHSGSRRTVEFLLEN  381 (563)
Q Consensus       338 ~~~v~~Ll~~~~~~~~---~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  381 (563)
                      ..++++++..|-..++   ..-+.|.|.|.-|+++++.+++.+|+++
T Consensus       230 ~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~  276 (284)
T PF06128_consen  230 YKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKY  276 (284)
T ss_pred             HHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHc
Confidence            4667777777655444   2356788888888888888888888888


No 125
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.92  E-value=0.78  Score=33.87  Aligned_cols=48  Identities=19%  Similarity=0.257  Sum_probs=35.7

Q ss_pred             ChHHHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHHcCChHHHHHhhhC
Q 039863          326 KIPLHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAHSGSRRTVEFLLEN  381 (563)
Q Consensus       326 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~  381 (563)
                      ...+..|+..|+.|+++.+++.+...        ...+..|+...+-++++||++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~~~~--------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKNKPD--------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHhccH--------HHHHHHHHHHhhHHHHHHHHHh
Confidence            34677888888888888888654211        3568888888888888888876


No 126
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=80.47  E-value=30  Score=33.79  Aligned_cols=23  Identities=13%  Similarity=-0.236  Sum_probs=12.7

Q ss_pred             hHHHHHHHHHcCChhhhhhhhhc
Q 039863           29 LMDNLYEAAVEGHVGKFEEHKAV   51 (563)
Q Consensus        29 ~~~~L~~Aa~~g~~~~v~~Ll~~   51 (563)
                      |.-.|..+...++.+....+++.
T Consensus        21 gsr~lQ~~l~~~~~~~~~~i~~~   43 (322)
T cd07920          21 GSRFLQQKLEEATPEEKELIFDE   43 (322)
T ss_pred             hhHHHHHHhccCCHHHHHHHHHH
Confidence            33355566666666555555554


No 127
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=63.07  E-value=49  Score=32.27  Aligned_cols=222  Identities=9%  Similarity=0.050  Sum_probs=109.3

Q ss_pred             ccCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhc--CC
Q 039863          124 ANAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKE--DP  201 (563)
Q Consensus       124 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~--~~  201 (563)
                      .|..|.-.|..+...+..+....+++.-...             ..--+.|..|.-.+...+..+..+....+++.  +.
T Consensus        17 ~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~-------------~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~   83 (322)
T cd07920          17 KDQHGSRFLQQKLEEATPEEKELIFDEILPH-------------VVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGH   83 (322)
T ss_pred             CCchhhHHHHHHhccCCHHHHHHHHHHHHHh-------------HHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            4556666777777777777777776652110             01123566777777777777766644444443  21


Q ss_pred             CCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCC-C--CCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhc
Q 039863          202 NLSYDANEAGETPLYLAAERGYKDVMEDILSTCE-S--PVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRS  278 (563)
Q Consensus       202 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~--~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~  278 (563)
                      -.....+..|.-.+..+...+..+....+++.-. .  ....+..|...+..+....            ..+..+.+++.
T Consensus        84 ~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~------------~~~~~~~i~~~  151 (322)
T cd07920          84 VVRLSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKF------------PPEDLQFIIDA  151 (322)
T ss_pred             HHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhC------------CHHHHHHHHHH
Confidence            1222356667777777666666444444333211 0  1124556666666555544            22322222221


Q ss_pred             cCC-CCCccCCCCCCCHHHHHHHcCChHH----HHHHHhcCCCCCccCCCCCChHHHHHHhcCCHHHHHHHHHhCCCC--
Q 039863          279 SKG-TQTTKPDQQGWLPLHLAAHLGNYYV----VKELLKADISAAYKPDNEGKIPLHLAAGKGRAYTMQELIRSCPSS--  351 (563)
Q Consensus       279 ~~~-~~~~~~d~~g~tpLh~A~~~g~~~~----v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~--  351 (563)
                      -.+ ...-..+..|...+.........+.    ++.+...-  .....|..|...+..+...+..+..+.+++.....  
T Consensus       152 l~~~~~~l~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~--~~L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~  229 (322)
T cd07920         152 FKGNCVALSTHPYGCRVIQRCLEHCSEEQREPLLEEILEHA--LELVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIV  229 (322)
T ss_pred             HHHHHHHHHcCccccHHHHHHHHhCCHHHHHHHHHHHHHHH--HHHhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            000 0011224455555555555444332    22332211  11234667777777777766554333333322110  


Q ss_pred             ccccccCCChHHHHHHHcCCh
Q 039863          352 CELVDDRGWNVFHFAAHSGSR  372 (563)
Q Consensus       352 ~~~~d~~g~t~Lh~A~~~~~~  372 (563)
                      .-..+..|...+..+......
T Consensus       230 ~l~~~k~Gs~Vve~~l~~~~~  250 (322)
T cd07920         230 QLSCHKFASNVVEKCLKHASK  250 (322)
T ss_pred             HHHcCcchHHHHHHHHHHCCH
Confidence            013456666666666666543


No 128
>TIGR02184 Myco_arth_vir_N Mycoplasma virulence family signal region. This model represents the N-terminal region, including a probable signal sequence or signal anchor which in most instances has four consecutive Lys residues before the hydrophobic stretch, of a family of large, virulence-associated proteins in Mycoplasma arthritidis and smaller proteins in Mycoplasma capricolum.
Probab=59.10  E-value=6.2  Score=23.26  Aligned_cols=23  Identities=17%  Similarity=0.381  Sum_probs=18.3

Q ss_pred             HhhhchHHHHHHHHHHHHhhhcc
Q 039863          504 NESKESHLVVAALIATVTFTAGI  526 (563)
Q Consensus       504 ~~~~~s~~~va~LiaTv~Faa~~  526 (563)
                      |+..-++.++|+|++.++|.+.+
T Consensus         8 KnkIl~~al~a~l~~S~s~g~Vi   30 (33)
T TIGR02184         8 KNKIATLVIVTSLLTSLTISGVI   30 (33)
T ss_pred             hhheehHHHHHHHHHhheeeeEE
Confidence            45556789999999999997643


No 129
>PF09610 Myco_arth_vir_N:  Mycoplasma virulence signal region (Myco_arth_vir_N);  InterPro: IPR011732 This entry represents the N-terminal region of a family of large, virulence-associated proteins in Mycoplasma arthritidis and smaller proteins in Mycoplasma capricolum. It includes a probable signal sequence or signal anchor, which, in most instances, has four consecutive Lys residues before the hydrophobic stretch.
Probab=41.54  E-value=15  Score=21.58  Aligned_cols=20  Identities=20%  Similarity=0.194  Sum_probs=15.2

Q ss_pred             hhchHHHHHHHHHHHHhhhc
Q 039863          506 SKESHLVVAALIATVTFTAG  525 (563)
Q Consensus       506 ~~~s~~~va~LiaTv~Faa~  525 (563)
                      ..-.+.++|.|+|.++|.+.
T Consensus        10 ~Il~la~~a~l~as~s~g~v   29 (33)
T PF09610_consen   10 KILTLALTASLLASGSFGSV   29 (33)
T ss_pred             hhhhHHHHHHHHHceeeeeE
Confidence            34467889999999998653


No 130
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.52  E-value=1.8e+02  Score=32.27  Aligned_cols=159  Identities=16%  Similarity=0.157  Sum_probs=89.9

Q ss_pred             cCCCCcHHHHHHHcCcHHHHHHHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc
Q 039863          125 NAKGETLLHIAARHGHYDIVKVLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPNLS  204 (563)
Q Consensus       125 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~  204 (563)
                      +.-|+.++-|--..|..|+.-.+++                          +..|-+.+|...|+++++-.......+-.
T Consensus       620 ~LvGqaiIaYLqKkgypeiAL~FVk--------------------------D~~tRF~LaLe~gnle~ale~akkldd~d  673 (1202)
T KOG0292|consen  620 NLVGQAIIAYLQKKGYPEIALHFVK--------------------------DERTRFELALECGNLEVALEAAKKLDDKD  673 (1202)
T ss_pred             CcccHHHHHHHHhcCCcceeeeeec--------------------------CcchheeeehhcCCHHHHHHHHHhcCcHH
Confidence            3446666666666666665554442                          23466778888888888776665433222


Q ss_pred             cccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHhhccccchhhhhhcccHHHHHHHHhccCCCCC
Q 039863          205 YDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAAAFREYTLQTYYYFFRKDREIIKVLLRSSKGTQT  284 (563)
Q Consensus       205 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~  284 (563)
                      .     ....-..|.+.|+..+++..+++..+.+.     .+-|.              ...++.+-++.|...      
T Consensus       674 ~-----w~rLge~Al~qgn~~IaEm~yQ~~knfek-----LsfLY--------------liTgn~eKL~Km~~i------  723 (1202)
T KOG0292|consen  674 V-----WERLGEEALRQGNHQIAEMCYQRTKNFEK-----LSFLY--------------LITGNLEKLSKMMKI------  723 (1202)
T ss_pred             H-----HHHHHHHHHHhcchHHHHHHHHHhhhhhh-----eeEEE--------------EEeCCHHHHHHHHHH------
Confidence            1     12223457788999999999887543221     11111              112255555555432      


Q ss_pred             ccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHHH--HHhcCCHHHHHHHHHhCC
Q 039863          285 TKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLHL--AAGKGRAYTMQELIRSCP  349 (563)
Q Consensus       285 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~--A~~~g~~~~v~~Ll~~~~  349 (563)
                      -..-.+-.+-++.|...|+.+--..++..+          |..||-+  |+.+|..+..+.|.+...
T Consensus       724 ae~r~D~~~~~qnalYl~dv~ervkIl~n~----------g~~~laylta~~~G~~~~ae~l~ee~~  780 (1202)
T KOG0292|consen  724 AEIRNDATGQFQNALYLGDVKERVKILENG----------GQLPLAYLTAAAHGLEDQAEKLGEELE  780 (1202)
T ss_pred             HHhhhhhHHHHHHHHHhccHHHHHHHHHhc----------CcccHHHHHHhhcCcHHHHHHHHHhhc
Confidence            001112234567778888876554444433          4556654  456787788888776643


No 131
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=40.14  E-value=22  Score=31.18  Aligned_cols=52  Identities=15%  Similarity=0.227  Sum_probs=35.1

Q ss_pred             cccCCChHHHHHHHcCChHHHH-HhhhCC-CcccCCCCCCCCCChHHHHHHHcC
Q 039863          355 VDDRGWNVFHFAAHSGSRRTVE-FLLENP-SLGNLMNEKNYDGNTPLLEHAVSG  406 (563)
Q Consensus       355 ~d~~g~t~Lh~A~~~~~~~iv~-~Ll~~~-~~~~~in~~d~~G~TpLh~A~~~~  406 (563)
                      .|.+..+|||-|+.-++.+++- ++++.. .....+|..|.+|..+|.+|....
T Consensus       218 Id~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~  271 (280)
T KOG4591|consen  218 IDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE  271 (280)
T ss_pred             HcCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence            4556678888888888887654 444442 223467778888888888876543


No 132
>PLN03218 maturation of RBCL 1; Provisional
Probab=39.43  E-value=53  Score=37.95  Aligned_cols=34  Identities=6%  Similarity=0.025  Sum_probs=18.3

Q ss_pred             HHhhhhhhchhhHH-HHHHHHHcCChhhhhhhhhc
Q 039863           18 RLRSVREKNIQLMD-NLYEAAVEGHVGKFEEHKAV   51 (563)
Q Consensus        18 ~l~~~~~~~~~~~~-~L~~Aa~~g~~~~v~~Ll~~   51 (563)
                      .+......+...++ .|...+..|+++....+++.
T Consensus       428 lf~~M~~pd~~Tyn~LL~a~~k~g~~e~A~~lf~~  462 (1060)
T PLN03218        428 FAKLIRNPTLSTFNMLMSVCASSQDIDGALRVLRL  462 (1060)
T ss_pred             HHHHcCCCCHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence            33333334444444 55666777777666655544


No 133
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=38.60  E-value=5.7e+02  Score=28.13  Aligned_cols=175  Identities=14%  Similarity=0.103  Sum_probs=82.6

Q ss_pred             HHHHHHcCCHHHHHH----HHhcCCCCccccCcCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH-Hhhc
Q 039863          181 LHEAVRYNQVDVVKM----LTKEDPNLSYDANEAGETPLYLAAERGYKDVMEDILSTCESPVDHGPMGRTALHAA-AFRE  255 (563)
Q Consensus       181 L~~A~~~g~~~iv~~----Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A-~~~~  255 (563)
                      +...+..|..+-++.    +++.+....   -....+.+..-++.|+.+-+..+++.-..+   +..-++.|..+ +..|
T Consensus       332 l~a~~~~g~~~~a~~i~~~m~~~g~~~d---~~~~~~Li~~y~k~G~~~~A~~vf~~m~~~---d~~t~n~lI~~y~~~G  405 (697)
T PLN03081        332 IRIFSRLALLEHAKQAHAGLIRTGFPLD---IVANTALVDLYSKWGRMEDARNVFDRMPRK---NLISWNALIAGYGNHG  405 (697)
T ss_pred             HHHHHhccchHHHHHHHHHHHHhCCCCC---eeehHHHHHHHHHCCCHHHHHHHHHhCCCC---CeeeHHHHHHHHHHcC
Confidence            444445566554443    444443221   112345556667888888888888765432   22334444333 2333


Q ss_pred             cccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHH-HHHHHcCChHHHHHHHh-----cCCCCCccCCCCCC-hH
Q 039863          256 YTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPL-HLAAHLGNYYVVKELLK-----ADISAAYKPDNEGK-IP  328 (563)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpL-h~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~~g~-tp  328 (563)
                      .        ...-.++++.+.+.  +..++   ..-.+.+ ...+..|..+-...+++     .+..+    +..-. ..
T Consensus       406 ~--------~~~A~~lf~~M~~~--g~~Pd---~~T~~~ll~a~~~~g~~~~a~~~f~~m~~~~g~~p----~~~~y~~l  468 (697)
T PLN03081        406 R--------GTKAVEMFERMIAE--GVAPN---HVTFLAVLSACRYSGLSEQGWEIFQSMSENHRIKP----RAMHYACM  468 (697)
T ss_pred             C--------HHHHHHHHHHHHHh--CCCCC---HHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCC----CccchHhH
Confidence            1        01123344444433  32222   1112233 33344566655444433     23222    22222 33


Q ss_pred             HHHHHhcCCHHHHHHHHHhCCCCccccccCCChHHHHH-HHcCChHHHHHhhhC
Q 039863          329 LHLAAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFA-AHSGSRRTVEFLLEN  381 (563)
Q Consensus       329 L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A-~~~~~~~iv~~Ll~~  381 (563)
                      +..-++.|..+-...+++..+..   .+..-++.|.-| ...|+.+..+.+.+.
T Consensus       469 i~~l~r~G~~~eA~~~~~~~~~~---p~~~~~~~Ll~a~~~~g~~~~a~~~~~~  519 (697)
T PLN03081        469 IELLGREGLLDEAYAMIRRAPFK---PTVNMWAALLTACRIHKNLELGRLAAEK  519 (697)
T ss_pred             HHHHHhcCCHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence            44556788888777777765533   222224444444 467777766665543


No 134
>PLN03218 maturation of RBCL 1; Provisional
Probab=36.90  E-value=1.4e+02  Score=34.76  Aligned_cols=20  Identities=20%  Similarity=0.110  Sum_probs=10.2

Q ss_pred             cHHHHHHHcCcHHHHHHHHH
Q 039863          130 TLLHIAARHGHYDIVKVLIA  149 (563)
Q Consensus       130 t~Lh~A~~~g~~~iv~~Ll~  149 (563)
                      +.+...++.|+.+-+..+++
T Consensus       512 aLI~gy~k~G~~eeAl~lf~  531 (1060)
T PLN03218        512 ALIDGCARAGQVAKAFGAYG  531 (1060)
T ss_pred             HHHHHHHHCcCHHHHHHHHH
Confidence            34455566666554444433


No 135
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=32.84  E-value=5.8e+02  Score=28.13  Aligned_cols=149  Identities=9%  Similarity=0.022  Sum_probs=67.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCCccccCcCCCcHH-HHHHHcCCHHHHHH----HHhcCCCCCCCCCCCCcHHHHHH
Q 039863          178 DTALHEAVRYNQVDVVKMLTKEDPNLSYDANEAGETPL-YLAAERGYKDVMED----ILSTCESPVDHGPMGRTALHAAA  252 (563)
Q Consensus       178 ~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL-~~A~~~g~~~~v~~----Ll~~~~~~~~~~~~g~t~Lh~A~  252 (563)
                      .+.+..-++.|+.+-+..+++.-..    .|..-.+.| ...+..|+.+-+..    +.+.|..++   ..-.+.+..|+
T Consensus       364 ~~Li~~y~k~G~~~~A~~vf~~m~~----~d~~t~n~lI~~y~~~G~~~~A~~lf~~M~~~g~~Pd---~~T~~~ll~a~  436 (697)
T PLN03081        364 TALVDLYSKWGRMEDARNVFDRMPR----KNLISWNALIAGYGNHGRGTKAVEMFERMIAEGVAPN---HVTFLAVLSAC  436 (697)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHhCCC----CCeeeHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHH
Confidence            3455666778888888777765332    222233343 33456677554433    334443332   11122333333


Q ss_pred             -hhccccchhhhhhcccHHHHHHHHhccCCCCCccCCCCCCCHHHHHHHcCChHHHHHHHhcCCCCCccCCCCCChHHH-
Q 039863          253 -FREYTLQTYYYFFRKDREIIKVLLRSSKGTQTTKPDQQGWLPLHLAAHLGNYYVVKELLKADISAAYKPDNEGKIPLH-  330 (563)
Q Consensus       253 -~~~~~~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~-  330 (563)
                       ..| ..       ..-.++.+.+.+. .+..++.  ..-...+..-++.|..+-+..+++.-..   ..+..-+..|. 
T Consensus       437 ~~~g-~~-------~~a~~~f~~m~~~-~g~~p~~--~~y~~li~~l~r~G~~~eA~~~~~~~~~---~p~~~~~~~Ll~  502 (697)
T PLN03081        437 RYSG-LS-------EQGWEIFQSMSEN-HRIKPRA--MHYACMIELLGREGLLDEAYAMIRRAPF---KPTVNMWAALLT  502 (697)
T ss_pred             hcCC-cH-------HHHHHHHHHHHHh-cCCCCCc--cchHhHHHHHHhcCCHHHHHHHHHHCCC---CCCHHHHHHHHH
Confidence             333 00       0012233333332 1222221  1112334555677887766666653221   12222344444 


Q ss_pred             HHHhcCCHHHHHHHHHh
Q 039863          331 LAAGKGRAYTMQELIRS  347 (563)
Q Consensus       331 ~A~~~g~~~~v~~Ll~~  347 (563)
                      .....|+.+..+...+.
T Consensus       503 a~~~~g~~~~a~~~~~~  519 (697)
T PLN03081        503 ACRIHKNLELGRLAAEK  519 (697)
T ss_pred             HHHHcCCcHHHHHHHHH
Confidence            44477887766555443


No 136
>PLN03077 Protein ECB2; Provisional
Probab=32.82  E-value=7.8e+02  Score=27.94  Aligned_cols=25  Identities=8%  Similarity=0.264  Sum_probs=15.9

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHhcCC
Q 039863          129 ETLLHIAARHGHYDIVKVLIAECKK  153 (563)
Q Consensus       129 ~t~Lh~A~~~g~~~iv~~Ll~~~~~  153 (563)
                      .+.+...++.|+.+-+..+++....
T Consensus       226 n~Li~~y~k~g~~~~A~~lf~~m~~  250 (857)
T PLN03077        226 NALITMYVKCGDVVSARLVFDRMPR  250 (857)
T ss_pred             hHHHHHHhcCCCHHHHHHHHhcCCC
Confidence            3455566667777777777766543


No 137
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=30.99  E-value=7  Score=40.39  Aligned_cols=34  Identities=12%  Similarity=-0.076  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHHHhhhcccCCCcccCCCCCCCCcc
Q 039863          510 HLVVAALIATVTFTAGITVPGGYINGIDPDQGAA  543 (563)
Q Consensus       510 ~~~va~LiaTv~Faa~~t~PGG~~~~~~~~~G~~  543 (563)
                      .++.-+++.....+..|.+++|...+.+...+-|
T Consensus       441 ~l~we~~rrss~a~~~f~~~~~~~~d~~~~~~n~  474 (503)
T KOG0513|consen  441 QLVWEAKRRSSRAPPTFPPSEGKFIDGGLIANNP  474 (503)
T ss_pred             HHHHHHHHhccCCCCcccccccceeecCccCCCc
Confidence            3566777777788888888988655333333333


No 138
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=28.63  E-value=43  Score=29.47  Aligned_cols=52  Identities=23%  Similarity=0.184  Sum_probs=39.1

Q ss_pred             ccCCCCcHHHHHHHcCcHHHHH-HHHHhcCCCCCCCCchhHHHHHHHhccCCCCCCcHHHHHHHc
Q 039863          124 ANAKGETLLHIAARHGHYDIVK-VLIAECKKPHQNNPEEGVAAARLMLGTTNEAKDTALHEAVRY  187 (563)
Q Consensus       124 ~~~~g~t~Lh~A~~~g~~~iv~-~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~L~~A~~~  187 (563)
                      .+.+...|||.|+.-|..+++- ++++..+..+.            .++..|.+|..+|..|...
T Consensus       218 Id~kTe~~LHk~iki~REDVl~LYfie~dakiP~------------~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  218 IDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPG------------ILNDADHNGALALDIALCR  270 (280)
T ss_pred             HcCCCcchhHHhhhccccceeeehhhhccccccc------------cccccCCCchHHHHHHHHH
Confidence            4555678999999999988764 56666665443            5777889999999988754


No 139
>PLN03077 Protein ECB2; Provisional
Probab=27.53  E-value=9.5e+02  Score=27.26  Aligned_cols=44  Identities=16%  Similarity=0.196  Sum_probs=24.1

Q ss_pred             HHhcCCHHHHHHHHHhCCCCccccccCCChHHHHHHH-cCChHHHHHh
Q 039863          332 AAGKGRAYTMQELIRSCPSSCELVDDRGWNVFHFAAH-SGSRRTVEFL  378 (563)
Q Consensus       332 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~-~~~~~iv~~L  378 (563)
                      -.+.|..+-...+++..+..   .|..-++.|.-|+. +++.+..+..
T Consensus       635 l~r~G~~~eA~~~~~~m~~~---pd~~~~~aLl~ac~~~~~~e~~e~~  679 (857)
T PLN03077        635 LGRAGKLTEAYNFINKMPIT---PDPAVWGALLNACRIHRHVELGELA  679 (857)
T ss_pred             HHhCCCHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHcCChHHHHHH
Confidence            34667777777777765422   33344555555553 4555554443


No 140
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=25.93  E-value=29  Score=36.03  Aligned_cols=46  Identities=15%  Similarity=0.076  Sum_probs=30.3

Q ss_pred             CCChHHHHHHHcCChHHHHHhhhCCCcccCCCCCCCCCChHHHHHHHcC
Q 039863          358 RGWNVFHFAAHSGSRRTVEFLLENPSLGNLMNEKNYDGNTPLLEHAVSG  406 (563)
Q Consensus       358 ~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~in~~d~~G~TpLh~A~~~~  406 (563)
                      ...++++..+.....+.+..++..   ....+..+..|+|+||++...+
T Consensus       135 ~~~~~~~~~~s~~~~~~~~~~l~~---~~~~~~~~~~g~t~L~~tl~~~  180 (503)
T KOG0513|consen  135 DLNLALRILVSGDKYSGAEVLLTK---YEIADAREVLGNTKLHLTLTKE  180 (503)
T ss_pred             ccccceeeeecCccccceeecccc---cccchhhhhcCCceeeeeccCC
Confidence            345667776666666666666654   3445556667888888887764


No 141
>PF04650 YSIRK_signal:  YSIRK type signal peptide;  InterPro: IPR005877  Many surface proteins found in Streptococcus, Staphylococcus, and related lineages share apparently homologous signal sequences. A motif resembling [YF]SIRKxxxGxxS[VIA] appears at the start of the transmembrane domain. The GxxS motif appears perfectly conserved, suggesting a specific function and not just homology. ; GO: 0016020 membrane
Probab=23.39  E-value=55  Score=18.60  Aligned_cols=14  Identities=43%  Similarity=0.432  Sum_probs=11.0

Q ss_pred             hHHHHHHHHHHHHh
Q 039863          509 SHLVVAALIATVTF  522 (563)
Q Consensus       509 s~~~va~LiaTv~F  522 (563)
                      +.-+++++|+|.-|
T Consensus        13 svGv~SV~ig~~~~   26 (27)
T PF04650_consen   13 SVGVASVLIGTLFF   26 (27)
T ss_pred             ccchhHHHHHHHHh
Confidence            46788999988765


No 142
>PF13124 DUF3963:  Protein of unknown function (DUF3963)
Probab=23.15  E-value=1.6e+02  Score=17.77  Aligned_cols=15  Identities=0%  Similarity=0.312  Sum_probs=10.5

Q ss_pred             hhhHHHhHHHHHhhh
Q 039863          493 SSRYEELEQSVNESK  507 (563)
Q Consensus       493 ~~~~~~~~~~~~~~~  507 (563)
                      ++.+..+++|+++..
T Consensus        10 eryfddiqkwirnit   24 (40)
T PF13124_consen   10 ERYFDDIQKWIRNIT   24 (40)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            345567789999843


No 143
>COG3610 Uncharacterized conserved protein [Function unknown]
Probab=22.43  E-value=56  Score=27.95  Aligned_cols=20  Identities=40%  Similarity=0.502  Sum_probs=18.1

Q ss_pred             HHHHHHHHHHhhhcccCCCc
Q 039863          512 VVAALIATVTFTAGITVPGG  531 (563)
Q Consensus       512 ~va~LiaTv~Faa~~t~PGG  531 (563)
                      ++.+.|+||.|+-.|++|.-
T Consensus        10 ~~~a~i~~v~Faivfnvp~~   29 (156)
T COG3610          10 MLFAFIATVGFAIVFNVPPR   29 (156)
T ss_pred             HHHHHHHHHHHHHHhcCCHH
Confidence            67899999999999999974


Done!