BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039864
(666 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255544930|ref|XP_002513526.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547434|gb|EEF48929.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 686
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/722 (53%), Positives = 471/722 (65%), Gaps = 95/722 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT+IL ++IKSIDPENASKIMGYILIQD+ E DLL LA G ETL+ +I +AK+
Sbjct: 1 MDTYEATNILMSKIKSIDPENASKIMGYILIQDLNENDLLSLAFGSETLLHNVIIKAKTH 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGLS+NT +T P+SP + NP SR NNH + SPRV T ++DF
Sbjct: 61 LGLSTNTLTT--PSSPLPSPLNPISR-------PANNHSPFSTQSSSSPRVGTP--FVDF 109
Query: 121 GKN--------SPLSN---------PKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGN 163
K+ S L+N PK SPFLS++NIRSGS LVP A +GGN
Sbjct: 110 AKSPSPHSWPASGLANNNNGITSISPKSSPFLSYDNIRSGSALVPPSA------TANGGN 163
Query: 164 SSGN------DYMEELPFNDYLSFLDE-SSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHR 216
SG+ D + E ++Y SFLD+ SK EDF DPR+Q + N D H+ HR
Sbjct: 164 GSGDVSRNSTDLLNEYQLDEYFSFLDDLPSKGEDFGDPRAQLGGFSM---NNVDNHI-HR 219
Query: 217 RSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVN-------- 268
R FS SDACFGTED GF +GYRPCLYFARGFCKNGE+CKFVHGGFG G ++
Sbjct: 220 RRFSESDACFGTEDGGFGIGYRPCLYFARGFCKNGENCKFVHGGFGAGENIGDVSGGGGG 279
Query: 269 --GVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQ 326
G++VGSP +M+G YLQQ +++MRMKAA QQRLA Y+K M+FLL+Q
Sbjct: 280 GGGLLVGSPREMEGLYLQQQEDMMRMKAAQQQQRLA-------------YNKYMNFLLQQ 326
Query: 327 QNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDE 386
++D QR A++M+ DEF+K GQ R ERNDFLAM + EK SA+RQIYLTFPADSTFKDE
Sbjct: 327 ESDSQRIGPASVMMGDEFHKIGQFRPERNDFLAMAMEEKANSASRQIYLTFPADSTFKDE 386
Query: 387 DVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKE 446
DVSNYFS FGPVQDVRIPYQQKRMFGFVTFV+ +TVKLIL+RGNPHFICDSRVLVKPYKE
Sbjct: 387 DVSNYFSHFGPVQDVRIPYQQKRMFGFVTFVHSDTVKLILSRGNPHFICDSRVLVKPYKE 446
Query: 447 KGKIVEKR-----QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEE 499
KGK+ KR QQ +RGN SPCSSPSG+D R+ YDLHLG++M +QE+MLRRKLE+
Sbjct: 447 KGKVTNKRQQQLQQQLMDRGNFSPCSSPSGLDPRELYDLHLGARMLYNSQEMMLRRKLEQ 506
Query: 500 QAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNV------- 552
QAELQQAIELQ RRL+NLQLP+L+ HHHQRSLS G+PI++ A D N N
Sbjct: 507 QAELQQAIELQGRRLINLQLPDLRGDYAHHHQRSLSAGAPISTHAPVDHNLNFTSDIKNQ 566
Query: 553 -IFPSFVDNSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEG--SHESSA 609
+ D+S N+S T A+Q Q E +AA +N N K E EG +++
Sbjct: 567 DVLEDKGDSSPTTNAS--TVVAEQNLQHEENAASFQSNDGVNGKVEGISLEGCDANKHCG 624
Query: 610 EI----LP-CKFASMRKSAEGQTPDL-PASSEVHGSTAISATSSVSESNADMPNITATDV 663
I LP FAS KS G DL P E S S+TS+ E +A +P ++ DV
Sbjct: 625 RIIEHGLPDSPFASPAKSL-GNPGDLYPCLVEAKESIEFSSTSAF-EISAAVPTTSSVDV 682
Query: 664 VS 665
S
Sbjct: 683 PS 684
>gi|224054504|ref|XP_002298293.1| predicted protein [Populus trichocarpa]
gi|222845551|gb|EEE83098.1| predicted protein [Populus trichocarpa]
Length = 674
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 371/710 (52%), Positives = 451/710 (63%), Gaps = 82/710 (11%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + T+IL ++KS+DPENAS+IMG+ILIQD E+DLLRLA GPETL+Q ++F+AK
Sbjct: 1 MDTHEITNILLTKLKSLDPENASRIMGFILIQDPTEKDLLRLAFGPETLLQNVVFKAKIH 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGLS+NT ST + S + + NN N PF Q SPR+ N +LDF
Sbjct: 61 LGLSTNTLSTPSTPSSPSPL----NPIARPCNNTN-------PFPQSSPRITNNGSFLDF 109
Query: 121 GKNSPLSNPKPSP----------------------FLSFENIRSGSCLVPSVAKNDVGVV 158
KN P P+P FLS++NIRSGS LVP ++N
Sbjct: 110 SKN-----PSPNPWSVHGLPNNSDSKSSISPKSSPFLSYDNIRSGSVLVPPFSRN----- 159
Query: 159 DSGGNSSG------NDYMEELPFNDYLSFLDE-SSKNEDFTDPRSQFSNWGQDLNNGGDV 211
GGN G D++ E +D+LSF D+ SSKNEDF D R Q + GDV
Sbjct: 160 --GGNGGGVCSNNSADFLGEYQSDDHLSFFDDPSSKNEDFMDQRVQMGGYSVA---NGDV 214
Query: 212 HLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGG-DVNGV 270
HL HRR FS SDAC G ED GF L YR CLYFARGFCKNGESCKF HG +V G
Sbjct: 215 HL-HRRRFSESDACSGAEDGGFGLRYRQCLYFARGFCKNGESCKFGHGDENMAEVNVGGA 273
Query: 271 IVGSPNKMDGFYLQQHDEIMRMKAAAHQQR--LAASQFASGVSPPLPYDKCMDFLLRQQN 328
+V SP +M+ YLQQ +E+M+ KA QQ + L Y+K M+FLL QQN
Sbjct: 274 LVSSPREMEELYLQQQEEMMKRKAVQQQQEEMMKMKAVQQQQQQRLAYNKHMNFLLLQQN 333
Query: 329 DPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
+ +R AA M+ DEFYKFG+ R RNDFLAMG+AEK SA+RQIYLTFPADS+FKDEDV
Sbjct: 334 EAERFGAA--MMGDEFYKFGRTRGGRNDFLAMGMAEKANSASRQIYLTFPADSSFKDEDV 391
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFS FGPVQDVRIPYQQKRMFGFVTFVYPETVK ILA+GNPH+IC+SRVLVKPYKEKG
Sbjct: 392 SNYFSSFGPVQDVRIPYQQKRMFGFVTFVYPETVKEILAKGNPHYICESRVLVKPYKEKG 451
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQA 506
K+ + QQ ERG SP SSPSG D R+ DLHLG++M T E+MLRRKLEEQAELQQA
Sbjct: 452 KVANRTQQLLERGGFSPASSPSGFDPRELCDLHLGARMLYNTPEMMLRRKLEEQAELQQA 511
Query: 507 IELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPA-CADVNQNVIFPS-------FV 558
IELQ RRL+NLQLP+L+ HHHQ SLS+G+PI+ P +NQ I S
Sbjct: 512 IELQGRRLINLQLPDLRGDHAHHHQHSLSVGAPISLPTHHTPINQTDILTSDGKNEITLE 571
Query: 559 DNSTANNSSNVTT--AADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILPCKF 616
DN + +S T A + Q EV+AACI NN + N K ES TE SH S+ E
Sbjct: 572 DNGNCSGASKSTLVPVAAENLQDEVNAACIQNNDTVNCKVESF-TE-SHGSNFER----- 624
Query: 617 ASMRKSAEGQTPDL-PASSEVHGSTAISATSSVSESNADMPNITATDVVS 665
S+ KS+E Q PD+ P+ +EV S +S SS SE++A +P + ++ S
Sbjct: 625 DSLTKSSENQHPDMSPSRAEVEESNELS-VSSCSENDASVPTTSTSNEAS 673
>gi|449476117|ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 46-like [Cucumis sativus]
Length = 675
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 353/705 (50%), Positives = 468/705 (66%), Gaps = 71/705 (10%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT++++ +IK+++PENASKIMG++LIQD+ +++L+RLA GPETL+ +LI +AK+
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG N+ S++ + S LN + +N+N PF+Q SPR+ NNG+ D
Sbjct: 61 LGFPLNSSSSTPSSP---------SPLNPIARPSNSN-----PFSQSSPRI-PNNGF-DL 104
Query: 121 GKN--SP--------------LSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNS 164
KN SP + +PK SP LS+++IR+ +P ++ G VDS
Sbjct: 105 TKNPSSPSTTGSWSLSGITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDS---- 160
Query: 165 SGNDYMEELPFNDYLSFLDESS--KNEDFTDPRSQFS----NWGQDLNNGGDVHLQHRRS 218
+ +EE N+YLSFL+ESS + ED DPR + NW Q ++N HRRS
Sbjct: 161 ---EVIEEPQVNEYLSFLNESSSSRGEDLVDPRMELGRGLQNWTQSMDNADTPF--HRRS 215
Query: 219 FSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKM 278
+SASD CFG+ED GF +GY+PCLYFARGFCKNG +CKF+HG F D D + IVGSP+K+
Sbjct: 216 YSASDVCFGSEDGGFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKL 275
Query: 279 DGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATL 338
+G + Q +E MR KAA Q+ AS+ +GVSP Y+K ++FLL+QQN+ RA AA L
Sbjct: 276 EGLF-DQREEFMRYKAAQQQRLATASELMAGVSPSQ-YNKYINFLLQQQNENHRATAAAL 333
Query: 339 MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPV 398
M+ DE++KFG R+ERNDFLA+ AEK SA+RQIYLTFPADSTFKDEDVS YFS FGPV
Sbjct: 334 MMGDEYHKFGMSRSERNDFLALA-AEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPV 392
Query: 399 QDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR---- 454
QDVRIPYQQKRMFGFVTFVYPETVK ILA+GNPHFIC+SRVLVKPYKEKGK+ EKR
Sbjct: 393 QDVRIPYQQKRMFGFVTFVYPETVKXILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQ 452
Query: 455 QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF---TQELMLRRKLEEQAELQQAIELQR 511
QQQ +RG+ SPC SPSG+D+RDPYDL+LG++M TQ +MLRRKLEEQ ELQQA+ELQ
Sbjct: 453 QQQLDRGDFSPCLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQALELQG 512
Query: 512 RRLMNLQLPNLKNHSV-HHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTA----NN- 565
RRL+NLQLP+LKN + HHH +L + +P++ + +NQN+ P F++ + NN
Sbjct: 513 RRLLNLQLPDLKNDQLHHHHPHNLPICAPLSIESHNQMNQNIFPPDFINPEASEGHENNQ 572
Query: 566 -SSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTE--GSHESSAEILP-CKFASMRK 621
++N + Q Q E + I +N E+ +E H+S ++LP FAS +K
Sbjct: 573 LATNNAISTQQNFQLEENLCFIQSNSGGKATEDGYNSELLEIHKSVEQVLPDSPFASPKK 632
Query: 622 SAEGQTPDLPASSEVHGSTAISAT-SSVSESNADMPNITATDVVS 665
SA GQ D+ S V G T S S+SN +P A D+ S
Sbjct: 633 SALGQHSDI---SSVKGDGCGPNTLPSSSQSNPSLPTGPAGDIAS 674
>gi|449442555|ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 675
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 353/705 (50%), Positives = 468/705 (66%), Gaps = 71/705 (10%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT++++ +IK+++PENASKIMG++LIQD+ +++L+RLA GPETL+ +LI +AK+
Sbjct: 1 MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG N+ S++ + S LN + +N+N PF+Q SPR+ NNG+ D
Sbjct: 61 LGFPLNSSSSTPSSP---------SPLNPIARPSNSN-----PFSQSSPRI-PNNGF-DL 104
Query: 121 GKN--SP--------------LSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNS 164
KN SP + +PK SP LS+++IR+ +P ++ G VDS
Sbjct: 105 TKNPSSPSTTGSWSLSGITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDS---- 160
Query: 165 SGNDYMEELPFNDYLSFLDESS--KNEDFTDPRSQFS----NWGQDLNNGGDVHLQHRRS 218
+ +EE N+YLSFL+ESS + ED DPR + NW Q ++N HRRS
Sbjct: 161 ---EVIEEPQVNEYLSFLNESSSSRGEDLVDPRMELGRGLQNWTQSMDNADTPF--HRRS 215
Query: 219 FSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKM 278
+SASD CFG+ED GF +GY+PCLYFARGFCKNG +CKF+HG F D D + IVGSP+K+
Sbjct: 216 YSASDVCFGSEDGGFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKL 275
Query: 279 DGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATL 338
+G + Q +E MR KAA Q+ AS+ +GVSP Y+K ++FLL+QQN+ RA AA L
Sbjct: 276 EGLF-DQREEFMRYKAAQQQRLATASELMAGVSPSQ-YNKYINFLLQQQNENHRATAAAL 333
Query: 339 MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPV 398
M+ DE++KFG R+ERNDFLA+ AEK SA+RQIYLTFPADSTFKDEDVS YFS FGPV
Sbjct: 334 MMGDEYHKFGMSRSERNDFLALA-AEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPV 392
Query: 399 QDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR---- 454
QDVRIPYQQKRMFGFVTFVYPETVK ILA+GNPHFIC+SRVLVKPYKEKGK+ EKR
Sbjct: 393 QDVRIPYQQKRMFGFVTFVYPETVKNILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQ 452
Query: 455 QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF---TQELMLRRKLEEQAELQQAIELQR 511
QQQ +RG+ SPC SPSG+D+RDPYDL+LG++M TQ +MLRRKLEEQ ELQQA+ELQ
Sbjct: 453 QQQLDRGDFSPCLSPSGLDARDPYDLNLGARMMYNNTQGMMLRRKLEEQVELQQALELQG 512
Query: 512 RRLMNLQLPNLKNHSV-HHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTA----NN- 565
RRL+NLQLP+LKN + HHH +L + +P++ + +NQN+ P F++ + NN
Sbjct: 513 RRLLNLQLPDLKNDQLHHHHPHNLPICAPLSIESHNQMNQNIFPPDFINPEASEGHENNQ 572
Query: 566 -SSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTE--GSHESSAEILP-CKFASMRK 621
++N + Q Q E + I +N E+ +E H+S ++LP FAS +K
Sbjct: 573 LATNNAISTQQNFQLEENLCFIQSNSGGKATEDGYNSELLEIHKSVEQVLPDSPFASPKK 632
Query: 622 SAEGQTPDLPASSEVHGSTAISAT-SSVSESNADMPNITATDVVS 665
SA GQ D+ S V G T S S+SN +P A D+ S
Sbjct: 633 SALGQHSDI---SSVKGDGCGPNTLPSSSQSNPSLPTGPAGDIAS 674
>gi|225436555|ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Vitis vinifera]
Length = 695
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 348/711 (48%), Positives = 455/711 (63%), Gaps = 93/711 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYIL-IQDVKERDLLRLASGPETLMQALIFRAKS 59
MD ++AT I+F+RI+++DPENASKIMGYIL IQD E++++RLA GPETL+ LI +AK+
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 QLGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLD 119
QLG+ SNT ST T S + NP S+ N N S P + G+ D
Sbjct: 61 QLGILSNTPSTPT----SPSPFNPISKPTRLPTNNGFNPSSSWPVS----------GFSD 106
Query: 120 FGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNS--------------- 164
SP S + LS+ + +G+ V +D+G V S S
Sbjct: 107 L--RSPNST---TAQLSYAAVVNGATNV-----SDLGTVSSSPASIPYYNNCSSSNNSSV 156
Query: 165 -SGNDYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASD 223
++ M++ D+LSFL+++SK ED DPR + + + G+ L HRRS+S +D
Sbjct: 157 VCNDNVMDDYQLQDHLSFLNDASKPEDLFDPRLELAMS----PSFGETQL-HRRSYSFND 211
Query: 224 ACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV----IVGSPNKMD 279
AC+G++D G++PCLYFARGFCKNG +CKF+HGGF D + + IVGSP K+D
Sbjct: 212 ACYGSDDGASGFGWKPCLYFARGFCKNGNTCKFLHGGFADSVEASSAASAAIVGSPGKLD 271
Query: 280 GFYLQQHDEIMRMKAAAHQQRLA-ASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATL 338
GF E++R + QQRLA ASQ +G++ PY+KCM+F + QQN+ QR+AAA L
Sbjct: 272 GF----EQEMLR----SQQQRLAVASQLMAGLN--FPYNKCMNFFM-QQNETQRSAAAAL 320
Query: 339 MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPV 398
M+ +E +KFG+ R ERNDF MGL + +RQIYLTFPADSTF++EDVSNYFSIFGPV
Sbjct: 321 MMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPV 380
Query: 399 QDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR---- 454
QDVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHF+CDSRVLVKPYKEKGK+ EK+
Sbjct: 381 QDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQ 440
Query: 455 ------QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQA 506
QQQ ERG S CSSPSG+D R+PYDLHLG++MF TQE++LRRKLEEQA+LQQA
Sbjct: 441 QQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQQA 500
Query: 507 IELQRRRLMNLQLPNLK--NHSVHHHQRSLSMGSPITSPACADV--NQNVIFPSFVDNST 562
IELQ RRLMNLQL +LK H HH +LS G+P+ SP+ + + NQ++ PS +N
Sbjct: 501 IELQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLGLPSDGNNQE 560
Query: 563 A--------NNSSNVTTAADQEPQKEVDAACILNNGS---NNTKEESSKTE--GSHESSA 609
+++ T AAD+ ++EV+ +C N+G+ NN+ EESS HES
Sbjct: 561 VPEENSSSPAATTSPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLE 620
Query: 610 EILP-CKFASMRKSAEGQTPDLPASSEVHGSTAISATSSVSESNADMPNIT 659
ILP FAS KSA ++ AS+ V ST IS T + S +N +P T
Sbjct: 621 HILPDSLFASPTKSAGDRSVFSTASASVDESTTISITPA-SNNNPVLPGTT 670
>gi|147807899|emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
Length = 697
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 348/713 (48%), Positives = 453/713 (63%), Gaps = 95/713 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYIL-IQDVKERDLLRLASGPETLMQALIFRAKS 59
MD ++AT I+F+RI+++DPENASKIMGYIL IQD E++++RLA GPETL+ LI +AK+
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 QLGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLD 119
QLG+ SNT ST T S + NP S+ N N S P + G+ D
Sbjct: 61 QLGILSNTPSTPT----SPSPFNPISKPTRLPTNNGFNPSSSWPVS----------GFSD 106
Query: 120 FGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNS--------------- 164
SP S + LS+ + +G+ V +D+G V S S
Sbjct: 107 L--RSPNST---TAQLSYAAVVNGATNV-----SDLGTVSSSPASIPYYNNCSGSNNSSV 156
Query: 165 -SGNDYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASD 223
++ M++ D+LSFL+++SK ED DPR + + + G+ L HRRS+S +D
Sbjct: 157 VCNDNVMDDYQLQDHLSFLNDASKPEDLFDPRLELAMSP----SFGETQL-HRRSYSFND 211
Query: 224 ACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV----IVGSPNKMD 279
AC+G++D G++PCLYFARGFCKNG +CKF+HGGF D + + IVGSP K+D
Sbjct: 212 ACYGSDDGASGFGWKPCLYFARGFCKNGNTCKFLHGGFADSVEASSAASAAIVGSPGKLD 271
Query: 280 GFYLQQHDEIMRMKAAAHQQRLA-ASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATL 338
GF E++R + QQRLA ASQ +G++ PY+KCM+F + QQN+ QR+AAA L
Sbjct: 272 GF----EQEMLR----SQQQRLAVASQLMAGLN--FPYNKCMNFFM-QQNETQRSAAAAL 320
Query: 339 MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPV 398
M+ +E +KFG+ R ERNDF MGL + +RQIYLTFPADSTF++EDVSNYFSIFGPV
Sbjct: 321 MMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPV 380
Query: 399 QDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR---- 454
QDVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHF+CDSRVLVKPYKEKGK+ EK+
Sbjct: 381 QDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQ 440
Query: 455 --------QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQ 504
QQQ ERG S CSSPSG+D R+PYDLHLG++MF TQE++LRRKLEEQA+LQ
Sbjct: 441 QQQQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQ 500
Query: 505 QAIELQRRRLMNLQLPNLK--NHSVHHHQRSLSMGSPITSPACADV--NQNVIFPSFVDN 560
QAIELQ RRLMNLQL +LK H HH +LS G+P+ SP + + NQ++ PS +N
Sbjct: 501 QAIELQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPXQSSIHNNQSLGLPSDGNN 560
Query: 561 STANNSS--------NVTTAADQEPQKEVDAACILNNGS---NNTKEESSKTE--GSHES 607
+ + T AAD+ ++EV+ +C N+G+ NN+ EESS HES
Sbjct: 561 QEVXEENSSSPAATTSPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHES 620
Query: 608 SAEILP-CKFASMRKSAEGQTPDLPASSEVHGSTAISATSSVSESNADMPNIT 659
ILP FAS KSA ++ AS+ V ST IS T + S +N +P T
Sbjct: 621 LEHILPDSLFASPTKSAGDRSVFSTASASVDESTTISITPA-SNNNPVLPGTT 672
>gi|356497343|ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 646
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 329/692 (47%), Positives = 442/692 (63%), Gaps = 72/692 (10%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M +AT+++ ++IK+ DPENASKIMGY+L+ +++E +L+R+A P+T++Q L+ R KS
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLM-NLEESELIRVACSPDTVLQTLVLRVKSH 59
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNN-------ANNNHVSRHPFAQMSPRVVT 113
LGL+ + S+P+ + NP +RL S+N N +R+P + S
Sbjct: 60 LGLT--LSTPSSPSQFPPSPLNPIARLTGTSSNPFSRGGPTNGFDFTRNPASPSSHSHAW 117
Query: 114 NNGYLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEEL 173
N F N+P+S PK +P LS++NIR+ L P V + D+++E
Sbjct: 118 N-----FPNNNPIS-PKSTPLLSYDNIRA---LSPRV-------------NGDCDFVDEQ 155
Query: 174 PFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGF 233
N+Y FL++SSKNED DPR + Q+ ++G D HL HRRS+SASD FG ++A
Sbjct: 156 QVNEYFPFLNDSSKNEDLVDPRLELGVGAQNWHSG-DSHL-HRRSYSASDVGFGCDEAAP 213
Query: 234 NLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMK 293
LGY+PCLYFARGFCKNG +CKF+HG F D D IVGSP+K++G ++Q +E +R K
Sbjct: 214 GLGYKPCLYFARGFCKNGTNCKFLHGAFTDSLDA---IVGSPSKLEG--MEQREEFVRFK 268
Query: 294 AAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAE 353
A QR+A+ A+ +K +FL+++ QRAAAA M+ +EFY FG R E
Sbjct: 269 AP-QLQRIASGPSAAA------REKYYEFLMQES---QRAAAA-FMMGEEFYNFGWDRPE 317
Query: 354 RNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGF 413
RNDFLA EK SA+RQIYLTFPA+STFKDEDVS YFS FGPVQDVRIPYQQKRMFGF
Sbjct: 318 RNDFLAAISGEKPNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGF 377
Query: 414 VTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR----QQQFERGNMSPCSSP 469
VTFVYPETV+LIL++GNPHFICDSRVLVKPYKEKGK+ +KR QQQ ERG++SPC SP
Sbjct: 378 VTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRQQQQQQQLERGDLSPCLSP 437
Query: 470 SGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSV 527
SG S++PYD HLG++M +++LRRK+EEQAELQQ +ELQ RRL NLQLP+ KN+ +
Sbjct: 438 SGFGSKEPYDFHLGARMLYNPHDILLRRKIEEQAELQQVLELQERRLKNLQLPDFKNNPI 497
Query: 528 HHHQRSLSMGSPITSP--ACADVNQNVIFPSFVDNS--------TANNSSNVTTAADQEP 577
HHHQRSLS+G+P+ P + +N + P + T+ NS + + Q+
Sbjct: 498 HHHQRSLSVGTPLVLPHQLHSHINDAGLSPDSIKGDITGYSGSFTSTNSLGIASEQQQQL 557
Query: 578 QKEVDAACILNNGSNNTKEESSKTEGS--HESSAEILP-CKFASMRKSAEGQTPDLPASS 634
QKEVD A I ++ S N ES EG S + LP FAS K+A G D +
Sbjct: 558 QKEVDPAHIDDSESRNLM-ESGNAEGVDLSNSVGQALPDSLFASPTKAAGGYHADFSTLA 616
Query: 635 EVHGSTAISATSSVSESNADMPNITATDVVSY 666
EV+ S SA+SS + P +++DV S+
Sbjct: 617 EVNESAVFSASSSSQDKLE--PTTSSSDVASH 646
>gi|357481341|ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355512291|gb|AES93914.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 685
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 322/694 (46%), Positives = 437/694 (62%), Gaps = 73/694 (10%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M ++AT+++ ++K+ DPENASKIMG++L+ +++E +L+RLA P+ ++ L R K+
Sbjct: 1 MGSYEATNVVLAKVKNFDPENASKIMGFLLM-NLEEYELVRLACCPDHVLHNLAIRVKTH 59
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG++ STP+SPS NP R+ + SNN PF++ SPR +NG+ DF
Sbjct: 60 LGMN-----LSTPSSPS--PLNPIGRITSSSNN---------PFSKSSPR--GSNGF-DF 100
Query: 121 GKN--SPLSN-------------PKPSPFLSFENIRSGSCLVPSVAKNDVG---VVDSGG 162
+N SP N PK +P +S+ENI+ G +V + G
Sbjct: 101 NRNPSSPSGNVWSQPSFPKNPISPKFNPLMSYENIQGGVGVVGGGGGSGAGGSCAFSPRV 160
Query: 163 NSSGNDYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDL--NNGGDVHLQHRRSFS 220
N+ D+++E N+ FL+ESS +D DPR + GQ+ N GD H H+RSFS
Sbjct: 161 NNGDYDFVDEQQLNECFPFLNESSNGDDLVDPRLEMGVGGQNWISGNNGDAHNIHKRSFS 220
Query: 221 ASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVN-GVIVGSPNKMD 279
A+DA F E++G G++PCLYFARGFCKNG +CKFVHG D D N G +VGSP K +
Sbjct: 221 ANDASFSVEESGLGFGFKPCLYFARGFCKNGSNCKFVHG---DSIDANSGAVVGSP-KFE 276
Query: 280 GFYLQQHDEIMRMKAAA-HQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATL 338
G L+QH+E MR KAA HQ+ +AASQ A+G + P+ YDK +D L++Q +D QRA AA
Sbjct: 277 G--LEQHEEFMRFKAAQQHQRMVAASQLAAGGTSPVSYDKYIDLLMQQHSDNQRAVAAAA 334
Query: 339 M-LNDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
+ +E++ G+GR ERN+FLAM +K SA+RQIYLTFPA+STFKDEDVS YFS FG
Sbjct: 335 FAMGEEYFNITGRGRPERNEFLAMVSGDKPNSASRQIYLTFPAESTFKDEDVSEYFSKFG 394
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-- 454
PVQDVRIPYQQKRMFGFVTFV+PETV++IL++GNPHFICDSRVLVKPYKEKGK+ +KR
Sbjct: 395 PVQDVRIPYQQKRMFGFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKVPDKRHQ 454
Query: 455 --QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQ-AELQQAIEL 509
QQQFERG+ SPC SPS DS++P+D H G++M +++LRRK+EEQ A+ QQ +EL
Sbjct: 455 HQQQQFERGDFSPCLSPSAFDSKEPFDFHPGTRMLYNPHDILLRRKIEEQAADFQQVLEL 514
Query: 510 QRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSP--ACADVNQNVIFPSFVDNSTANNSS 567
Q RRL +LQLP+ KN+ +HHHQRSLS+G+P+ P + VN + P + S
Sbjct: 515 QERRLKSLQLPDFKNNPIHHHQRSLSVGAPLVFPHQLHSHVNHAGLSPDNIQGDFTGYSG 574
Query: 568 NVTTAA-------DQEPQKEVDAACI---LNNGSNNTKEESSKTEG---SHESSAEILP- 613
++T+A QE KE D +CI + ++ +K+EG + LP
Sbjct: 575 SLTSAGSLGAASEQQELHKEADPSCIDAVTAAAESGNLKDVAKSEGVDLGKRNVEHTLPD 634
Query: 614 CKFASMRKSAEGQTPDLPASSEVHGSTAISATSS 647
FAS K+A D E + STA S T S
Sbjct: 635 SLFASPTKAAGDYLSDFSPQEEANESTAFSTTLS 668
>gi|356540386|ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Glycine max]
Length = 658
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 322/696 (46%), Positives = 441/696 (63%), Gaps = 68/696 (9%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M +AT+++ ++IK+ DPENASKIMGY+L+ +++E +L+RLA P+ ++ L+ R K+
Sbjct: 1 MGSCEATNVVLSKIKNFDPENASKIMGYLLM-NLEESELIRLACSPDPVLHTLVLRVKNH 59
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNN--------ANNNHVSRHPFAQMSPRVV 112
L + + +T + S + NP +RL S+N N +R+ + S
Sbjct: 60 LSGLTLSSTTPSSPSLPPSPLNPTARLTAISSNPFSRGGGPTNGFDFTRNHPSSPSSHSH 119
Query: 113 TNNGYLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEE 172
N F N+P+S PK +P S++NIR+ L P V +D G D+++E
Sbjct: 120 AWN----FPNNNPIS-PKSTPLFSYDNIRA---LSPRVVNDDCG-----------DFVDE 160
Query: 173 LPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAG 232
N+Y FL++SSKNED DPR +F Q+ ++G D HLQHRRS+SASD FG ++A
Sbjct: 161 QQVNEYFPFLNDSSKNEDLVDPRLEFGVGAQNWHSG-DSHLQHRRSYSASDVGFGCDEAA 219
Query: 233 F---NLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNK-MDGFYLQQHDE 288
LGY+PCLYFARGFCKNG +CKF+HG F D D IVGSP+K ++G ++Q +E
Sbjct: 220 AAAPGLGYKPCLYFARGFCKNGTNCKFLHGAFTDSLDA---IVGSPSKQLEG--MEQREE 274
Query: 289 IMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFG 348
+R A QR+A+ A+ +K +FL+++ QR AAA ++ +EFY FG
Sbjct: 275 FVRFNKAPQLQRIASGPSAAA------REKYFEFLIQES---QRLAAAAFIMGEEFYNFG 325
Query: 349 QGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQK 408
+ ERNDFLA +EK SA++QIYLTFPA+STFKDEDVS YFS FGPVQDVRIPYQQK
Sbjct: 326 WDKPERNDFLAAISSEKSNSASQQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQK 385
Query: 409 RMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR----QQQFERGNMS 464
RMFGFVTFVYPETV+LIL++GNPHFICDSRVLVKPYKEKGK+ +KR QQQ ERG++S
Sbjct: 386 RMFGFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRQQHQQQQLERGDLS 445
Query: 465 PCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNL 522
PC SPSG S++PYD HLG++M +++LRRK+EEQAELQQ ELQ RRL NLQLP+
Sbjct: 446 PCLSPSGFGSKEPYDFHLGARMLYNPHDVLLRRKIEEQAELQQVRELQERRLKNLQLPDF 505
Query: 523 KNHSVHHHQRSLSMGSPITSP--ACADVNQNVIFPSFVDNSTANNSSNVTT------AAD 574
KN+ +HHHQRSLS+G P+ P + +N + P + S + ++ A+D
Sbjct: 506 KNNPIHHHQRSLSVGIPLALPHQLHSHINDAGLSPDSIKGDITGYSGSFSSTNSLGIASD 565
Query: 575 QE-PQKEVDAACILNNGSNNTKEESSKTEGSHESSA--EILP-CKFASMRKSAEGQTPDL 630
Q+ P KEVD ACI ++ + N K ES TEG S++ + LP FAS K+ D
Sbjct: 566 QQLPLKEVDPACIDDSENGNLK-ESGNTEGVDLSNSVEQALPDSLFASPTKATGDYHADF 624
Query: 631 PASSEVHGSTAISATSSVSESNADMPNITATDVVSY 666
+EV+ S SA+SS + P +++DV S+
Sbjct: 625 STLAEVNESAVFSASSSSEDKLE--PTTSSSDVASH 658
>gi|224104191|ref|XP_002313352.1| predicted protein [Populus trichocarpa]
gi|222849760|gb|EEE87307.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 332/694 (47%), Positives = 434/694 (62%), Gaps = 69/694 (9%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT+I+F+RI+S++PENASKIMGY+L+QD E++++RLA GPETL+Q LI + K+Q
Sbjct: 1 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY--- 117
LG SNT ST +P P SR + P S R+ NNG+
Sbjct: 61 LGFPSNTPSTPSPAFI------PSSRPS--------------PLYISSSRIPNNNGFDIT 100
Query: 118 ---LDFGKNSPLSNPKPSPFLSF-------ENIRSGSCLVPSVAKNDVGVVDSGGNSSGN 167
+ PL +P + LS+ NI +GS S N + N
Sbjct: 101 NSSSPSTNSWPLLSPNSTTSLSYASVVNGASNINAGSTPFQPTVSLSKAFSYSNNNDNAN 160
Query: 168 DYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFG 227
D ++E + SFL++S K +D DPR + + GD L H+RSFS CFG
Sbjct: 161 DLVDEYELQERFSFLNDS-KTDDLFDPRGELAMSPPAF---GDNSL-HKRSFSVPGMCFG 215
Query: 228 TEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHD 287
+ED+ G++PCLYF+RGFCKNG C+FVHG D + IVGSP++++ F +Q
Sbjct: 216 SEDSNSGFGWKPCLYFSRGFCKNGTGCRFVHGDSAD----SAAIVGSPSELNEF--EQCQ 269
Query: 288 EIMRMKAAAHQQRLAA-SQFASGVSPPLPYDKCMDFLLRQQNDPQR-AAAATLMLNDEFY 345
EI+R KAAA Q++LAA SQF +G + LP +KCM+FL +QQN+ QR AAAA LM+ DE +
Sbjct: 270 EILRSKAAAQQRKLAAASQFMAGATF-LPQNKCMNFLHQQQNESQRSAAAAALMMGDEIH 328
Query: 346 KFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPY 405
KFG+ R ER+DF MGL ++ + RQIYLTFPADSTF++EDVS+YFS +GPVQDVRIPY
Sbjct: 329 KFGRIRPERSDFSQMGLGGAMSPSARQIYLTFPADSTFREEDVSSYFSFYGPVQDVRIPY 388
Query: 406 QQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQ---QQFERGN 462
QQKRMFGFVTFV+ ETVKLILA+GNPHF+CDSRVLVKPYKEKGK+ +K+ QQ ER
Sbjct: 389 QQKRMFGFVTFVFAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKHQQQQQIEREE 448
Query: 463 MSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLP 520
S C SPS ++ R+P+DLHLG +MF TQE MLRRKLEE+A+LQQAIELQ RRL+NLQL
Sbjct: 449 YSACPSPSRINCREPFDLHLGGRMFYNTQE-MLRRKLEEEADLQQAIELQERRLLNLQLL 507
Query: 521 NLKNHSVHHHQRSLSMGSPITSPACADV--NQNVIFP-SFVDNST--ANNSSN----VTT 571
+LKNH H + LS GSP+ SP NQ + FP +D A N SN
Sbjct: 508 DLKNHRQHRYFHGLSTGSPLPSPTILHSPNNQTLFFPIDGIDKEVQHAENGSNPDAAAAQ 567
Query: 572 AADQEPQKEVDAACILN--NGSNNTKEESSKTEGS--HESSAEILPCK-FASMRKSA-EG 625
A + +EV AC N NG+N KEE S ++ S +E+ ILP F S +KSA +
Sbjct: 568 NAVADADQEVSPACNHNDGNGNNRDKEEKSNSDESDLNENLEHILPDNLFGSPKKSAGDN 627
Query: 626 QTPDLPASSEVHGSTAISATSSVSESNADMPNIT 659
T AS EV +++ S T+S SN +P +
Sbjct: 628 LTVFSTASVEVDDNSS-SLTTSSPNSNPLVPTTS 660
>gi|356529848|ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 696
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 294/643 (45%), Positives = 411/643 (63%), Gaps = 84/643 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DPENASKIMG +L+QD E++L+RLA GPE L+ ++I +A+ +
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLSSNT-FSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLD 119
LGL SN+ +TST SPS P+ N ++ +++S + N
Sbjct: 61 LGLPSNSPHTTSTLPSPS-----PYLSKQNSTS------------SRLSALTIPNPS--- 100
Query: 120 FGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYL 179
S P S + +++ +GS + + + +GG+ D ++E D L
Sbjct: 101 ------ASWPTMSELQTPDDLVAGSL----TSSSSLPYYANGGS----DPVDEFQLQDQL 146
Query: 180 SFLDE---SSKNEDFTDPRSQFSNWGQDLNN----------------GGDVHLQHRRSFS 220
+FL++ +S + +P + N DL++ GG +H RRS S
Sbjct: 147 AFLNDGSNTSTSHKNNNPDLFYPNNNSDLSSSPTTAADPTLFPSDGWGGSLH---RRSCS 203
Query: 221 ASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV--IVGSPNKM 278
SDAC G+ED LG++PCLYFARG+CKNG SC+F+HGG GD +VGSP+K+
Sbjct: 204 VSDACLGSEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADVGGAAAAMVGSPSKI 263
Query: 279 DGFYLQQHDEIMRMKAAAHQQRLAASQF-ASGVSPPLPYDKCMDFLLRQQ-NDPQRAAAA 336
+ ++Q E++R K+ Q+ AASQ AS + P P K M+FLL+QQ ND QRAAAA
Sbjct: 264 E--MMEQCHELLRSKSFQQQRLAAASQLMASSIFPYSP--KSMNFLLQQQQNDTQRAAAA 319
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
LM++++ +KFG+ R ERNDF ++ + A+RQIYLTFPADSTF++EDVSNYFSI+G
Sbjct: 320 ALMMSEDLHKFGRSRLERNDF-SLNSPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYG 378
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-Q 455
PVQDVRIPYQQKRMFGFVTFVYPETVKLIL++GNPHF+CD+RVLVKPYKEKGK+ +K+ Q
Sbjct: 379 PVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQQ 438
Query: 456 QQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRR 513
QQ +RG+ SPC +P+G+D+RD +DL LG +M TQ+++ RRKLEEQA+LQQA+ELQ RR
Sbjct: 439 QQVDRGDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRR 498
Query: 514 LMNLQLPNLKNHSVHHHQRSLSMGSPITSPACAD--VNQNVIFPSFVDN--------STA 563
LM LQL ++K HHQR+LS GSPI SP + NQN++ PSF N ST+
Sbjct: 499 LMGLQLLDIKK----HHQRALSTGSPIPSPTHSPNMFNQNIV-PSFHINSESPKESGSTS 553
Query: 564 NNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHE 606
+S + +A Q+P ++ NG N KE + K SH+
Sbjct: 554 APASTASVSAGQQPVNISVGKEVVVNGENGYKEGNGKQSSSHD 596
>gi|356542895|ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 698
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 298/652 (45%), Positives = 405/652 (62%), Gaps = 100/652 (15%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+F+RI+++D ENASKIMG +L+QD E++++RLA GPE L+ ++I +A+
Sbjct: 1 MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKD 60
Query: 61 LGLSSNTFSTSTPTSP-----SLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNN 115
LGL SN+ T + S N+N SRL+ N + P
Sbjct: 61 LGLPSNSPPTPSTPPSPSPFISRQNSNTSSRLSVSGIN-------------LPP------ 101
Query: 116 GYLDFGKNSPLSNPKPSP-FLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELP 174
PL+ P PS + + +++ S + + + +G G+D ++E
Sbjct: 102 ---------PLTIPNPSASWPTMSELQTDLVAGSSTSLSSLPFYANG----GSDPIDEFQ 148
Query: 175 FNDYLSFLDESS-------KNEDFTDPR-SQFSN---------------WGQDLNNGGDV 211
D LSFL++ S N D P S FS+ WG L
Sbjct: 149 LQDQLSFLNDGSNTSISHKNNPDLFYPTYSDFSSSPTTAADPTLFPSYGWGGSL------ 202
Query: 212 HLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVI 271
HRRS S +DAC GTED LG++PCLYFARG+CKNG SC+F+HGG GD + +
Sbjct: 203 ---HRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGL---GDADAAM 256
Query: 272 VGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYD-KCMDFLL-RQQND 329
VGSP+K++ ++Q E++R K+A Q+ AASQ S S PY KCM+FLL +QQND
Sbjct: 257 VGSPSKIE--MMEQCHELLRSKSAQQQRLAAASQLMS--SSTFPYSPKCMNFLLQQQQND 312
Query: 330 PQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVS 389
QRAAAA LM++++ +KFG+ R ERNDF ++ + A+RQIYLTFPADSTF++EDVS
Sbjct: 313 TQRAAAAALMMSEDLHKFGRSRLERNDF-SLNSPGMVNPASRQIYLTFPADSTFREEDVS 371
Query: 390 NYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGK 449
NYFSI+GPVQDVRIPYQQKRMFGFVTFVYPETVKLIL++GNPHF+CD+RVLVKPYKEKGK
Sbjct: 372 NYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGK 431
Query: 450 IVEKR--QQQFERGNMSPCSSPSGVDSRD-PYDLHLGSKMF--TQELMLRRKLEEQAELQ 504
+ +K+ QQQ +RG+ SPC +P+G+D+RD +DL LGS+MF TQ+++ RRKLEEQA+LQ
Sbjct: 432 VPDKKLQQQQVDRGDFSPCGTPTGLDARDHQFDLQLGSRMFYNTQDMLWRRKLEEQADLQ 491
Query: 505 QAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACAD--VNQNVIFPSFVDNST 562
QA+ELQ RRLM LQL ++K HHQR+L GSPI SP + NQN++ PSF S
Sbjct: 492 QALELQSRRLMGLQLLDIKK----HHQRALCTGSPIPSPTHSPNMFNQNLV-PSFHITSE 546
Query: 563 ANNSSNVT-----TAADQEPQKEVDAAC---ILNNGSNNTKEESSKTEGSHE 606
A S T TA+ Q+ V+ + ++ NG + E + + SH+
Sbjct: 547 APKESGSTSAPAGTASVSTGQQSVNISVGKEVMVNGEDGYDEGNGRQSSSHD 598
>gi|356542909|ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 704
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 294/648 (45%), Positives = 407/648 (62%), Gaps = 84/648 (12%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+F+RI+++DPENASKIMG +L+QD E++++RLA GPE L+ ++I +A+ +
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL SN+ T + + + N N SR + P + N
Sbjct: 61 LGLPSNSPPTPSTPP----------SPSPFISRQNLNTSSRLSGTNIPPALTIPN----- 105
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
P S P S + +++ S + LV + + + + + G+D ++E D L+
Sbjct: 106 ----PSSWPTMSELQTPDDLMSPNHLVVGSSTSSLSLPFYA--NGGSDPIDEFQLQDQLA 159
Query: 181 FLDESS-----------------KNEDFT-------DPRSQFSNWGQDLNNGGDVHLQHR 216
FL++ S N D + DP + F ++G GG +H R
Sbjct: 160 FLNDGSPTSTALSHKNNPDMFYPSNSDLSSSPTTAADP-TLFPSYGW----GGSLH---R 211
Query: 217 RSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPN 276
RS S +DAC GTED LG++PCLYFARG+CKNG SC+F+HGG GD + +VGSP+
Sbjct: 212 RSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGD---ADAAMVGSPS 268
Query: 277 KMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYD-KCMDFLLRQQ-NDPQRAA 334
K++ ++Q E++R K+ Q+ AASQ + S PY KCM+FLL+QQ ND QRAA
Sbjct: 269 KIE--MMEQCHELLRSKSGQQQRLAAASQLMA--SSTFPYSPKCMNFLLQQQQNDTQRAA 324
Query: 335 AATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSI 394
AA LM++++ +KFG+ R ERNDF ++ + A+RQIYLTFPADSTF++EDVSNYFSI
Sbjct: 325 AAALMMSEDLHKFGRSRLERNDF-SLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSI 383
Query: 395 FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK- 453
+GPVQDVRIPYQQKRMFGFVTFVYPETVKLIL++GNPHF+CD+RVLVKPYKEKGK+ +K
Sbjct: 384 YGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKY 443
Query: 454 ---RQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIE 508
+QQQ +RG+ SPC +P+G+D+RD +DL LG +MF TQ+++ RRKLEEQA+LQQA+E
Sbjct: 444 RKLQQQQVDRGDFSPCGTPTGLDARDQFDLQLGGRMFYNTQDMLWRRKLEEQADLQQALE 503
Query: 509 LQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACAD--VNQNVIFPSFVDNSTANNS 566
LQ RRLM LQL ++K HHQR+LS GSPI SP + NQN++ PSF S A
Sbjct: 504 LQSRRLMGLQLLDIKK----HHQRALSAGSPIPSPTHSPNMFNQNLV-PSFHITSEAPKE 558
Query: 567 SNVTTAADQEP-----QKEVDAAC---ILNNGSNNTKEESSKTEGSHE 606
S ++A Q++V+ + + NG N E + K SHE
Sbjct: 559 SGSSSAPASIASVSVGQQQVNISVGKEVDVNGENGYDEGNGKQSSSHE 606
>gi|38230504|gb|AAR14273.1| predicted protein [Populus tremula x Populus alba]
Length = 705
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 318/703 (45%), Positives = 422/703 (60%), Gaps = 91/703 (12%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + AT I+F+RI+++DPENASKIMG +LIQD E++++RLA GPE L+ ++I +A+ +
Sbjct: 1 MDAYGATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLSSNT---FSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGLSS T S S+P+ +N SR NN S SR F + N
Sbjct: 61 LGLSSPTNLSTSPSSPSPLYSSNPVAISRQNNSS-------TSRLGFNIPPSLAIPNPSS 113
Query: 118 LDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFND 177
+ S L NP +S + VPS A V GG S D M+E D
Sbjct: 114 NNSSSWSDLPNPD-DLMISPNDSSLNPASVPSYANG----VRGGGES---DLMDEFHLQD 165
Query: 178 YLSFL----DESSKNEDFTDPRSQF--------------SNWGQDLNNGGDVHLQHRRSF 219
LSFL SK+ D P+ S WG G VH RRS
Sbjct: 166 QLSFLMIIHKSRSKSSDLFYPQLDALSSPTGASDSMMFPSYWG------GSVH---RRSC 216
Query: 220 SASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV-IVGSPN-- 276
S SD G+ED G+RPCLYFARG+CKNG +C+FVHGG G+ ++G +VGSPN
Sbjct: 217 SVSDV-LGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLGE---LDGAGVVGSPNSN 272
Query: 277 -KMDGFYLQQHDEIMRMKAAAHQQRLAA-SQFASGVSPPLPYD-KCMDFLLRQQ-NDPQR 332
K+D + Q E++R K+A HQQRLAA SQ SG + PY K M+FLL+QQ ND QR
Sbjct: 273 NKID--MMDQCHELLRSKSA-HQQRLAAASQLMSGSAASFPYSPKSMNFLLQQQQNDSQR 329
Query: 333 AAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYF 392
AAA LM+ ++ +KFG+ R +RND + A+RQIYLTFPADSTF++EDVSNYF
Sbjct: 330 AAATALMMGEDMHKFGRSRLDRNDLV--------NPASRQIYLTFPADSTFREEDVSNYF 381
Query: 393 SIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVE 452
SI+GPVQDVRIPYQQKRMFGFVTFVYPETVK+ILA+GNPHF+CD+RVLVKPYKEKGK+ +
Sbjct: 382 SIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPD 441
Query: 453 KR--QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIE 508
K+ QQQ ERG SPC +P+G+DSRDP+DL LG+ MF TQ+++ RRKLE QA+LQQA+E
Sbjct: 442 KKQQQQQVERGEFSPCGTPTGLDSRDPFDLQLGAGMFYNTQDMLWRRKLEGQADLQQALE 501
Query: 509 LQRRRLMNLQLPNLKNHSVHHHQRSLSMGS--PITSPACADVNQNVIFPSFVDNSTANNS 566
LQ RRLM+LQL ++K HH R+LS GS P+T N ++ FP + +ST
Sbjct: 502 LQSRRLMSLQLLDVKK----HHHRALSNGSPCPLTYSLSQYFNHSLAFPP-LHSSTEAPQ 556
Query: 567 SNVTTAADQEPQKEVDAAC--ILNNGSNNTKEESSKTEGSHESSAEILPCKFASMRKSAE 624
N +++ P V A ++N ++ + SS+ GS + S+ + + +++S E
Sbjct: 557 ENCSSSM---PATSVTARLKNKISNATSGKEYTSSEENGSGKESSH---GEDSDLQESLE 610
Query: 625 GQTPDLPASSEVHG-----STAISATSSVSESNADMPNITATD 662
PD P +S G S I+ + E +A +P T+ +
Sbjct: 611 HNLPDSPFASPAKGTGDYYSAFINGLTEAHEKDASIPTSTSAN 653
>gi|356531625|ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Glycine max]
Length = 700
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 295/674 (43%), Positives = 414/674 (61%), Gaps = 85/674 (12%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+F+RI+++DPENASKIMG +L+QD E++++RLA GPE L+ ++I +A+ +
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL SN+ T + + + SR N+ S+ + ++ P +T
Sbjct: 61 LGLPSNSPPTPSTPP---SPSPFLSRQNSTSSRLSGINI---------PPALT------- 101
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
+ NP P +S +++ S + LV V + + G+D +++ D LS
Sbjct: 102 -----IPNPSSWPTMS-DDLMSPNHLV--VGSSTSSSSLPYYANGGSDPIDDFQLQDQLS 153
Query: 181 FLDESSKNEDF----TDPRSQFSNWGQDLNN----------------GGDVHLQHRRSFS 220
FL++ S T+P + DL++ GG + HRRS S
Sbjct: 154 FLNDGSPTSTAFAHKTNPDLFYPTNNSDLSSSPTTAVDPTLFPSYGWGGSI---HRRSCS 210
Query: 221 ASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVH-GGFGDGGDVNGVIVGSPNKMD 279
+DAC G+ED LG++PCLYFARG+CKNG SC+F+H G G +VGSP K++
Sbjct: 211 VNDACLGSEDPSSGLGWKPCLYFARGYCKNGTSCRFLHGGIGDADGGGAAAMVGSPGKIE 270
Query: 280 GFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYD-KCMDFLL-RQQNDPQRAAAAT 337
++Q E++R K+ Q+ AASQ + S PY K M+FLL +QQND QRAAAA
Sbjct: 271 --MMEQCHELLRSKSVQQQRLAAASQLMA--SSTFPYSPKSMNFLLQQQQNDTQRAAAAA 326
Query: 338 LMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGP 397
LM++++ +KFG+ R ERNDF ++ + A+RQIYLTFPADSTF++EDVSNYFSI+GP
Sbjct: 327 LMMSEDLHKFGRSRLERNDF-SLNSPVMVNPASRQIYLTFPADSTFREEDVSNYFSIYGP 385
Query: 398 VQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-QQ 456
VQDVRIPYQQKRMFGFVTFVYPETVKLIL++GNPHF+CD+RVLVKPYKEKGK+ +K+ QQ
Sbjct: 386 VQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKQQQ 445
Query: 457 QFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRL 514
Q +RG+ SPC +P+G+D+RD +DL LG +M TQ+++ RRKLEEQA+LQQA+ELQ RRL
Sbjct: 446 QVDRGDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRL 505
Query: 515 MNLQLPNLKNHSVHHHQRSLSMGSPITSPACAD--VNQNVIFPSFVDN--------STAN 564
M LQL ++K HHQR+LS GSPI SP + NQN++ PSF N ST+
Sbjct: 506 MGLQLLDIKK----HHQRALSTGSPIPSPTHSPNMFNQNIV-PSFHINSESPKESGSTSA 560
Query: 565 NSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILPCKFASMRKSAE 624
+S + +A Q+P ++ NG N KE + K SH+ +++ E
Sbjct: 561 PASTASVSAGQQPVNISVGKEVVVNGENGYKEGNGKQSSSHDD---------CDLQECLE 611
Query: 625 GQTPDLPASSEVHG 638
PD P +S G
Sbjct: 612 HNLPDSPFASPTKG 625
>gi|297811379|ref|XP_002873573.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
gi|297319410|gb|EFH49832.1| hypothetical protein ARALYDRAFT_325766 [Arabidopsis lyrata subsp.
lyrata]
Length = 651
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 302/638 (47%), Positives = 396/638 (62%), Gaps = 84/638 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD DAT++L +I+S++P+ A KI+GY+L+QD +RDL+ LA GPE+++Q++I + KS
Sbjct: 1 MDSGDATALLLTKIRSLEPDYAPKIIGYLLLQDFGDRDLMHLARGPESILQSIISKVKSH 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG+ SN +STPTS S LN N S H +NG++DF
Sbjct: 61 LGIFSNNSPSSTPTS--------PSPLNPICRPPINGRGSSH-----------SNGFMDF 101
Query: 121 GKN---------------------------SPLSNPKPSPFLSFENIRSGSCLVPSVAKN 153
+N SP P P PF S ++ V+
Sbjct: 102 RRNSPSSPSSTSPWSLNNSMNPINGNNPHISPKHTPIPKPFSSHQS--------NGVSAT 153
Query: 154 DVGVVDSGGNSSGNDYMEELPFNDYLSFLDES-SKNEDFTDPRSQFSNWGQDLNNGGDVH 212
D G D+GGN+ D +++ NDYLSFLD+S SK ED DPR D G+ H
Sbjct: 154 DSGSADAGGNA---DLLDDQQLNDYLSFLDDSCSKTEDLVDPRIPLDYSVDD----GETH 206
Query: 213 LQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIV 272
L HRRSFSA DA FG+ D GF G +PC+YF+RG CKNGESCKF+HGG+ + D NG++
Sbjct: 207 L-HRRSFSA-DASFGSGDDGFGSGCKPCVYFSRGLCKNGESCKFIHGGYPENMDCNGIVA 264
Query: 273 GSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQR 332
SP KM+ F ++QH+E+MR+K A QQRLA+ G +P LPY+K MDFLL+Q QR
Sbjct: 265 DSPRKMENF-VRQHEEMMRLKLAYQQQRLASQIL--GRAPLLPYEKRMDFLLQQH--AQR 319
Query: 333 AAAATLMLNDE-FYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNY 391
L DE F+ GR ER + +AM L ++ S +RQIYLTFPADSTFKDEDV+ Y
Sbjct: 320 DGG--LPFGDERFWSSSPGRLERMELMAMQLGDQSNSVSRQIYLTFPADSTFKDEDVATY 377
Query: 392 FSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIV 451
FS+FG VQDVRIPYQQKRMFGFV+F +PETVK++LARGNPHFICDSRVLVKPYKEKGK++
Sbjct: 378 FSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVL 437
Query: 452 EKR-----QQQFERGNMSPCSSPSGVDSRDPYDLHL-GSKM-FTQELMLRRKLEEQAELQ 504
+K+ QQQ ERGN SPCSSPSGVD R+ D HL GSKM + + M+RRK+ EQA+L
Sbjct: 438 DKKQQQLLQQQIERGNYSPCSSPSGVDPREQSDFHLVGSKMLYERREMMRRKM-EQADLL 496
Query: 505 QAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTAN 564
+AIEL+RRR +NLQLP KN + +H RS S+GSP + + NQ+ F S + + A+
Sbjct: 497 RAIELERRRFINLQLPEFKNSVMQNHHRSFSVGSPGYFSSAS--NQSPDFQSEL--TVAD 552
Query: 565 NSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTE 602
V ++ P ++ + NN S KE + K+E
Sbjct: 553 ALEVVDDTSELHPYPVINPMSVNNNYSKGAKEWTDKSE 590
>gi|240256278|ref|NP_568277.5| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187639|ref|NP_001190296.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334187641|ref|NP_001190297.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|334302925|sp|Q94CJ8.3|C3H55_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 55;
Short=AtC3H55
gi|26453236|dbj|BAC43691.1| unknown protein [Arabidopsis thaliana]
gi|27311807|gb|AAO00869.1| putative protein [Arabidopsis thaliana]
gi|332004426|gb|AED91809.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004427|gb|AED91810.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
gi|332004428|gb|AED91811.1| zinc finger CCCH domain-containing protein 55 [Arabidopsis
thaliana]
Length = 650
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 311/704 (44%), Positives = 418/704 (59%), Gaps = 95/704 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD DATS+L +I+S++P+ A KI+GY+L+ D +RDL+ LA GPE+++Q+ I + KS
Sbjct: 1 MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG+ SN +STPTS S LN N S H +NG++DF
Sbjct: 61 LGIFSNNSPSSTPTS--------PSPLNPICRPPLNGRGSSH-----------SNGFMDF 101
Query: 121 GKN---------------------------SPLSNPKPSPFLSFENIRSGSCLVPSVAKN 153
+N SP P PF S ++ ++
Sbjct: 102 RRNSPSSPSSTSPWSFNNCINGNNGNNPHISPKHTPISKPFSSHQS--------NGLSAT 153
Query: 154 DVGVVDSGGNSSGNDYMEELPFNDYLSFLDES-SKNEDFTDPRSQFSNWGQDLNNGGDVH 212
G D+ G G D +++ ND LSFLD+S SK ED DP ++ G+ H
Sbjct: 154 HSGSADAAG---GADLLDDQQLNDCLSFLDDSCSKTEDLVDPSIPLD---YSVDGDGETH 207
Query: 213 LQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIV 272
L HRRSFS DA F + D GF G +PC+YF+RG CKNGESCKF+HGG+ D D NG++
Sbjct: 208 L-HRRSFSC-DASFVSGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVA 265
Query: 273 GSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQR 332
SP KM+ F ++QH+E+MR+K A QQRLA+ G +P LPY+K MDFLL+Q QR
Sbjct: 266 DSPRKMENF-VRQHEEMMRLKLAYQQQRLASQIL--GRAPQLPYEKRMDFLLQQH--AQR 320
Query: 333 AAAATLMLNDE-FYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNY 391
L DE F+ GR ER + LAM L ++ SA+RQIYLTFPADSTFKDEDV+ Y
Sbjct: 321 DGG--LPFGDERFWSSSPGRLERME-LAMHLGDQSNSASRQIYLTFPADSTFKDEDVATY 377
Query: 392 FSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIV 451
FS+FG VQDVRIPYQQKRMFGFV+F +PETVK++LARGNPHFICDSRVLVKPYKEKGK++
Sbjct: 378 FSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVL 437
Query: 452 EKR-----QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKM-FTQELMLRRKLEEQAELQQ 505
+K+ QQQ ERGN SPCSSPSG+D R+ D HLGSKM + + M+RRK+ EQA+L +
Sbjct: 438 DKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKI-EQADLLR 496
Query: 506 AIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTANN 565
AIEL+RRR +NLQLP KN +H RS S+GSP + NQ+ F S ++ + A
Sbjct: 497 AIELERRRFINLQLPEFKNSVTLNHHRSFSVGSPGYFSSAG--NQSPDFQSELNGADALK 554
Query: 566 SSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTE----GSHESSAEILPCK-FASMR 620
++ T + P V+ + N+ SN KEE++K+E S + +LP F S
Sbjct: 555 VTDDTL--ELHPYPVVNPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLFPSAS 612
Query: 621 KSAEGQTPDLPASSEVHGSTAISATSSVSESNADMPNITATDVV 664
+ + +T D S+E + +S+T+ N P +T +++
Sbjct: 613 STDDHKTDD---SAETNAKVGVSSTN----ENDHEPPVTTNNLM 649
>gi|255544928|ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547433|gb|EEF48928.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 700
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 272/481 (56%), Positives = 334/481 (69%), Gaps = 40/481 (8%)
Query: 168 DYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFG 227
D ++E D+ SFL++S +E F DPR + GD HL HRRSFS CFG
Sbjct: 174 DLIDEYQLQDHFSFLNDSKTDELF-DPRLDLA---MSPTAYGDTHL-HRRSFSVPGLCFG 228
Query: 228 TEDAGFNLGYRPCLYFARGFCKNGESCKFVHGG-FGDGGDVNGVIVGSPNKMDGFYLQQH 286
+EDA LG++PCLYFARGFCKNG SC+F+HGG GDG +VGSP+K+ F +Q
Sbjct: 229 SEDANSGLGWKPCLYFARGFCKNGTSCRFLHGGESGDGA----TLVGSPSKLSEF--EQC 282
Query: 287 DEIMRMKAAAHQQRLAASQ--FASGVSPPLPYDKCMDFLLRQQNDPQR-AAAATLMLNDE 343
E++R KAAA QQ+ A+ F +G S PY+KCM+ LL+QQND QR AAAA LM+ +E
Sbjct: 283 QELLRSKAAAAQQQKLAAASQFMTGAS--FPYNKCMNLLLQQQNDTQRSAAAAALMMGEE 340
Query: 344 FYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRI 403
+KFG+ R ERNDF AMGL + +RQIYLTFPADSTF++EDVSNYFSI+GPVQDVRI
Sbjct: 341 LHKFGRCRPERNDFSAMGLGGAMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRI 400
Query: 404 PYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR----QQQFE 459
PYQQKRMFGFVTFVYPETVKLILA+GNPHF+CDSRVLVKPYKEKGK+ +K+ QQQ E
Sbjct: 401 PYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKQPHQQQQME 460
Query: 460 RGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNL 517
RG+ S CSSPSG+DSR+P+DLHLG++MF TQE++LRRKLEEQAELQQAIELQ RRLMNL
Sbjct: 461 RGDYSACSSPSGLDSREPFDLHLGARMFQNTQEMLLRRKLEEQAELQQAIELQGRRLMNL 520
Query: 518 QLPNLKNHSVHHHQRSLSMGSPITSPACADV--NQNVIF-PSFVDNSTANNSSNVTTA-- 572
QL + KNH+ H LS GSP+ SP + +Q +IF P +D + + A
Sbjct: 521 QLLDFKNHNHHQFLHGLSTGSPVPSPTPSRTPNSQTLIFQPDGIDQEVPEENGGIPDAVA 580
Query: 573 -----ADQEPQKEVDAACILNNGS--NNTKEESSKTEGS--HESSAEILPCK-FASMRKS 622
AD E EV+ +NG+ N++ EE S TE + ES ILP F S +KS
Sbjct: 581 SRNGVADGE--LEVNPVSNHSNGNSYNSSTEEKSSTEENDLRESLEHILPDNLFTSPKKS 638
Query: 623 A 623
A
Sbjct: 639 A 639
>gi|297830802|ref|XP_002883283.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329123|gb|EFH59542.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 607
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 298/653 (45%), Positives = 407/653 (62%), Gaps = 92/653 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD D TSILF +I++++P+ ASKI+GY+L+QD+ RDL+RLA GP+TL+Q++ +AKS
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGTRDLMRLALGPDTLLQSVCLKAKSA 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGLSSN S+++ NP SR N + RH +Q SP NG+++F
Sbjct: 61 LGLSSNGSSSASSPL------NPISRPIN---------IHRHSLSQSSP----GNGFMEF 101
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLV--PSVAKNDVGVVDSG--GNSSGN-DYMEELPF 175
+N+PLS +P ++ S ++ P A + + D G G+S+GN D+++E
Sbjct: 102 SRNNPLSPSLTTP----GSLGSNPNMISSPFQASSSLFASDGGAAGDSTGNGDFLDEQQL 157
Query: 176 NDYLSFLDESSK--NEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGF 233
+YLSFL+ESS N++ DP +G +NG D HL H+RSFSASDACFG+E+ GF
Sbjct: 158 GNYLSFLNESSSKNNDESLDP------FGFSADNG-DAHL-HKRSFSASDACFGSEEPGF 209
Query: 234 NLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMK 293
G +F HGG GD D G GSP+ + +Q +E++RMK
Sbjct: 210 G---------------GGGYNRFPHGGLGDDFDSPGGF-GSPD----YVSRQQEEMVRMK 249
Query: 294 AAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQ-GRA 352
A +QR+AA+Q+ + P+ Y+K ++FLL Q+N + A +E Y FG GR
Sbjct: 250 MA-QRQRMAAAQYLAATGSPMSYEKGLNFLLHQRNVHRSGAG---QYGEEGYWFGSPGRH 305
Query: 353 ERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFG 412
ER++F+ MG +K SA++QIYLTFPADS+F DEDVSNYF FGPVQDVRIPYQQKRMFG
Sbjct: 306 ERDEFMGMG--DKSNSASKQIYLTFPADSSFTDEDVSNYFGTFGPVQDVRIPYQQKRMFG 363
Query: 413 FVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-----QQQFERGNMSPCS 467
FVTFV+ ETV++ILARGNPHFICDSRVLVKPYKEKG+I+EKR QQ ERGN SP S
Sbjct: 364 FVTFVHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPGS 423
Query: 468 SPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNH 525
SPSG+DSRD ++ L +MF TQE+M R+ EQA+LQQAIE QRRR +NLQLP++ +
Sbjct: 424 SPSGMDSRDLFESLLSPRMFSNTQEMMRRKA--EQADLQQAIEFQRRRFLNLQLPDMDSE 481
Query: 526 SVHHHQRSLSMGSPIT-SPACADVNQNVIFPSFVDNSTANNSSNVTTAADQEP---QKEV 581
S HHQRSLS+GSP+ SP VNQ+++F S N+S+ + + Q E
Sbjct: 482 SFLHHQRSLSIGSPVHFSPR---VNQSMLFRS-------ENTSDEVFEGNGDSGHFQSEA 531
Query: 582 DAACILNNGSNNTKEE---SSKTEGSHESSAEILP-CKFASMRKSAEGQTPDL 630
A + + G N+++E + +G + LP F+S K+ E Q P+
Sbjct: 532 TRAFLSDTGHNSSQERVYNNHLNKGQETTLENALPDSFFSSPSKTGETQHPEF 584
>gi|297734950|emb|CBI17184.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 265/480 (55%), Positives = 334/480 (69%), Gaps = 47/480 (9%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV---- 270
HRRS+S +DAC+G++D G++PCLYFARGFCKNG +CKF+HGGF D + +
Sbjct: 123 HRRSYSFNDACYGSDDGASGFGWKPCLYFARGFCKNGNTCKFLHGGFADSVEASSAASAA 182
Query: 271 IVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLA-ASQFASGVSPPLPYDKCMDFLLRQQND 329
IVGSP K+DGF E++R + QQRLA ASQ +G++ PY+KCM+F + QQN+
Sbjct: 183 IVGSPGKLDGF----EQEMLR----SQQQRLAVASQLMAGLN--FPYNKCMNFFM-QQNE 231
Query: 330 PQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVS 389
QR+AAA LM+ +E +KFG+ R ERNDF MGL + +RQIYLTFPADSTF++EDVS
Sbjct: 232 TQRSAAAALMMGEELHKFGRCRPERNDFSGMGLGGAVNPGSRQIYLTFPADSTFREEDVS 291
Query: 390 NYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGK 449
NYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHF+CDSRVLVKPYKEKGK
Sbjct: 292 NYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGK 351
Query: 450 IVEKR----------QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKL 497
+ EK+ QQQ ERG S CSSPSG+D R+PYDLHLG++MF TQE++LRRKL
Sbjct: 352 VPEKKQQHQQQQQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKL 411
Query: 498 EEQAELQQAIELQRRRLMNLQLPNLK--NHSVHHHQRSLSMGSPITSPACADV--NQNVI 553
EEQA+LQQAIELQ RRLMNLQL +LK H HH +LS G+P+ SP+ + + NQ++
Sbjct: 412 EEQADLQQAIELQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLG 471
Query: 554 FPSFVDNSTA--------NNSSNVTTAADQEPQKEVDAACILNNGS---NNTKEESSKTE 602
PS +N +++ T AAD+ ++EV+ +C N+G+ NN+ EESS
Sbjct: 472 LPSDGNNQEVPEENSSSPAATTSPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPA 531
Query: 603 --GSHESSAEILP-CKFASMRKSAEGQTPDLPASSEVHGSTAISATSSVSESNADMPNIT 659
HES ILP FAS KSA ++ AS+ V ST IS T + S +N +P T
Sbjct: 532 DFDLHESLEHILPDSLFASPTKSAGDRSVFSTASASVDESTTISITPA-SNNNPVLPGTT 590
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYIL-IQDVKERDLLRLASGPETLMQALIFRAKS 59
MD ++AT I+F+RI+++DPENASKIMGYIL IQD E++++RLA GPETL+ LI +AK+
Sbjct: 1 MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60
Query: 60 QLGLSSN 66
QLG+ SN
Sbjct: 61 QLGILSN 67
>gi|79313317|ref|NP_001030738.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642940|gb|AEE76461.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 602
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 299/652 (45%), Positives = 396/652 (60%), Gaps = 95/652 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD D TSILF +I++++P+ ASKI+GY+L+QD+ + DL+RLA GPETL+Q++ +AKS
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNC-----SNNANNNHVSRHPFAQMSPRVVTNN 115
LGLSSN S+++ NP SR N S+++ N SR+P +SP T
Sbjct: 61 LGLSSNGSSSASSPL------NPISRPINIHRHSLSHSSPGNGFSRNP---LSPSFAT-- 109
Query: 116 GYLDFGKNSPLSNPK--PSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEEL 173
S SNP SPF + ++ A + DS GN D+++E
Sbjct: 110 ------PGSLGSNPNMISSPFQASSSL---------FASDGAAAGDSTGN---GDFLDEQ 151
Query: 174 PFNDYLSFLDESSK--NEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDA 231
+YLSFL+ESS N++ DP +G +NG D HL H+RSFSASDACFG+E+
Sbjct: 152 QLGNYLSFLNESSSKNNDESLDP------FGFSADNG-DAHL-HKRSFSASDACFGSEEP 203
Query: 232 GFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMR 291
GF G +F+HGG GD D G GSP+ + +Q +EI+R
Sbjct: 204 GFG---------------GGGYNRFLHGGLGDDFDSPGGF-GSPD----YVSRQQEEIVR 243
Query: 292 MKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQ-G 350
MK A +QR+AA+Q+ + P+ Y+K ++FLL Q+N + A +E Y FG G
Sbjct: 244 MKMA-QRQRMAAAQYLAATGSPMSYEKGLNFLLHQRNAHRSGAG---QFGEEGYWFGSPG 299
Query: 351 RAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRM 410
R ER++F+ MG +K SA++QIYLTFPADS+F DEDVSNYF FGPVQDVRIPYQQKRM
Sbjct: 300 RHERDEFMGMG--DKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRM 357
Query: 411 FGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-----QQQFERGNMSP 465
FGFVTF++ ETV++ILARGNPHFICDSRVLVKPYKEKG+I+EKR QQ ERGN SP
Sbjct: 358 FGFVTFLHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSP 417
Query: 466 CSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLK 523
SSPSG+DSRD +D HL +MF TQE+M R+ EQA+LQQAIE QRRR ++LQLP++
Sbjct: 418 GSSPSGMDSRDLFDSHLAPRMFSNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLPDMD 475
Query: 524 NHSVHHHQRSLSMGSPIT-SPACADVNQNVIFPSFVDNSTANNSSNVTTAADQEPQKEVD 582
+ S HHQRSLS+GSP+ SP VNQ+++F S + + D Q E
Sbjct: 476 SESFLHHQRSLSIGSPVHFSPR---VNQSMLF-----RSESTSDEVFEGNGDSGHQSEAT 527
Query: 583 AACILNNGSNNTKEE---SSKTEGSHESSAEILPCK-FASMRKSAEGQTPDL 630
A + + G N ++E S +G S LP FAS K+ E Q P+
Sbjct: 528 RAFLSDTGHNISQERGYNSHLNKGQETSLENTLPDSFFASPSKTGETQHPEF 579
>gi|224072821|ref|XP_002303898.1| predicted protein [Populus trichocarpa]
gi|222841330|gb|EEE78877.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 293/675 (43%), Positives = 406/675 (60%), Gaps = 85/675 (12%)
Query: 26 MGYILIQDVKERDLLRLASGPETLMQALIFRAKSQLGLSSNTFSTSTPTSPSLNNNNPFS 85
MG +LIQD E++++RLA GPE L+ ++I +A+ +LGL S+PT+ S + ++P
Sbjct: 1 MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELGL-------SSPTNLSTSPSSPSP 53
Query: 86 RLNNCS---NNANNNHVSRHPFAQMSPRVVTNNGYLDFGKNSPLSNPKPSPFLSFENIRS 142
++ + N++ SR F + N + S L NP +S +
Sbjct: 54 LYSSNPIAISRQNSSSTSRLGFNIPPSLAIPNPSSNNSSSWSDLPNPD-DLMISPNDSSL 112
Query: 143 GSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLSFLDESSKN-------------E 189
VP A GV GG S D M+E D LSFL+++S+N +
Sbjct: 113 NPASVPFYAN---GV--RGGES---DLMDEFQLQDQLSFLNDNSQNLGPKSSDLFYPQLD 164
Query: 190 DFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCK 249
+ P + GG VH RRS S SD G+ED G+RPCLYFARG+CK
Sbjct: 165 ALSSPTGASDSMMFPSYWGGSVH---RRSCSVSDV-LGSEDPNSGFGWRPCLYFARGYCK 220
Query: 250 NGESCKFVHGGFGDGGDVNGV-IVGSPN---KMDGFYLQQHDEIMRMKAAAHQQRLAA-S 304
NG +C+FVHGG G+ ++G +VGSPN K+D + Q E++R K+A HQQRLAA S
Sbjct: 221 NGSNCRFVHGGLGE---LDGAGVVGSPNSNNKID--MMDQCHELLRSKSA-HQQRLAAAS 274
Query: 305 QFASGVSPPLPYD-KCMDFLLRQQ-NDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGL 362
Q S + PY K M+FLL+QQ ND QRAAA LM+ ++ +KFG+ R +RND +
Sbjct: 275 QLMSSSAASFPYSPKSMNFLLQQQQNDSQRAAATALMMGEDMHKFGRSRLDRNDLV---- 330
Query: 363 AEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETV 422
A+RQIYLTFPADSTF++EDVSNYFSI+GPVQDVRIPYQQKRMFGFVTFVYPETV
Sbjct: 331 ----NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETV 386
Query: 423 KLILARGNPHFICDSRVLVKPYKEKGKIVEKR--QQQFERGNMSPCSSPSGVDSRDPYDL 480
K+ILA+GNPHF+CD+RVLVKPYKEKGK+ +K+ QQQ ERG SPC +P+G+DSRDP+DL
Sbjct: 387 KIILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQVERGEFSPCGTPTGLDSRDPFDL 446
Query: 481 HLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGS 538
LG++MF TQ+++ RRKLEEQA+LQQA+ELQ RRLM+LQL ++K HH R+LS GS
Sbjct: 447 QLGARMFYNTQDMLWRRKLEEQADLQQALELQSRRLMSLQLLDVKK----HHHRALSNGS 502
Query: 539 PITSPACAD--VNQNVIFPSFVDNSTAN----NSSNVTTAADQEPQKEVDAACILNNGSN 592
P+ SP + N ++ FP ++ +SS T+ P+K++ +N ++
Sbjct: 503 PVPSPTHSPNIFNHSLAFPPLHSSTEVPQENCSSSMPATSVTAPPEKQI------SNATS 556
Query: 593 NTKEESSKTEGSHESSAEILPCKFASMRKSAEGQTPDLPASSEVHG-----STAISATSS 647
+ SS+ GS + S+ + + +++S E PD P +S G S I+ +
Sbjct: 557 GKEYTSSEENGSGKESSH---GEDSDLQESLEHNLPDSPFASPTKGTGDYYSAFINGLTE 613
Query: 648 VSESNADMPNITATD 662
E +A +P T+ +
Sbjct: 614 AREKDASIPTSTSAN 628
>gi|11994270|dbj|BAB01453.1| unnamed protein product [Arabidopsis thaliana]
Length = 591
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 293/637 (45%), Positives = 388/637 (60%), Gaps = 94/637 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD D TSILF +I++++P+ ASKI+GY+L+QD+ + DL+RLA GPETL+Q++ +AKS
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNC-----SNNANNNHVSRHPFAQMSPRVVTNN 115
LGLSSN S+++ NP SR N S+++ N SR+P +SP T
Sbjct: 61 LGLSSNGSSSASSPL------NPISRPINIHRHSLSHSSPGNGFSRNP---LSPSFAT-- 109
Query: 116 GYLDFGKNSPLSNPK--PSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEEL 173
S SNP SPF + ++ A + DS GN D+++E
Sbjct: 110 ------PGSLGSNPNMISSPFQASSSL---------FASDGAAAGDSTGN---GDFLDEQ 151
Query: 174 PFNDYLSFLDESSK--NEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDA 231
+YLSFL+ESS N++ DP +G +NG D HL H+RSFSASDACFG+E+
Sbjct: 152 QLGNYLSFLNESSSKNNDESLDP------FGFSADNG-DAHL-HKRSFSASDACFGSEEP 203
Query: 232 GFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMR 291
GF G +F+HGG GD D G GSP+ + +Q +EI+R
Sbjct: 204 GFG---------------GGGYNRFLHGGLGDDFDSPGGF-GSPD----YVSRQQEEIVR 243
Query: 292 MKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQ-G 350
MK A +QR+AA+Q+ + P+ Y+K ++FLL Q+N + A +E Y FG G
Sbjct: 244 MKMA-QRQRMAAAQYLAATGSPMSYEKGLNFLLHQRNAHRSGAG---QFGEEGYWFGSPG 299
Query: 351 RAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRM 410
R ER++F+ MG +K SA++QIYLTFPADS+F DEDVSNYF FGPVQDVRIPYQQKRM
Sbjct: 300 RHERDEFMGMG--DKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRM 357
Query: 411 FGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-----QQQFERGNMSP 465
FGFVTF++ ETV++ILARGNPHFICDSRVLVKPYKEKG+I+EKR QQ ERGN SP
Sbjct: 358 FGFVTFLHSETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSP 417
Query: 466 CSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLK 523
SSPSG+DSRD +D HL +MF TQE+M R+ EQA+LQQAIE QRRR ++LQLP++
Sbjct: 418 GSSPSGMDSRDLFDSHLAPRMFSNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLPDMD 475
Query: 524 NHSVHHHQRSLSMGSPIT-SPACADVNQNVIFPSFVDNSTANNSSNVTTAADQEPQKEVD 582
+ S HHQRSLS+GSP+ SP VNQ+++F S + + D Q E
Sbjct: 476 SESFLHHQRSLSIGSPVHFSPR---VNQSMLF-----RSESTSDEVFEGNGDSGHQSEAT 527
Query: 583 AACILNNGSNNTKEE---SSKTEGSHESSAEILPCKF 616
A + + G N ++E S +G S LP F
Sbjct: 528 RAFLSDTGHNISQERGYNSHLNKGQETSLENTLPDSF 564
>gi|224114163|ref|XP_002332416.1| predicted protein [Populus trichocarpa]
gi|222832369|gb|EEE70846.1| predicted protein [Populus trichocarpa]
Length = 598
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/530 (48%), Positives = 342/530 (64%), Gaps = 50/530 (9%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+F+RI+++DPENASKIMG +LIQD E++++RLA GPE L+ ++I +A+ +
Sbjct: 1 MDGYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL S T + +P+ PS ++ ++ N+ S P +T
Sbjct: 61 LGLCSPTNPSKSPSPPSPLYSSNPITISR-----QNSSSSTSRLGFNIPPSLTIPNPSSN 115
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
+S P P +S +GS L P+ A V GG S D M+E D LS
Sbjct: 116 FSSSWSDLPNPDDLIS----PNGSSLNPASAPFYANGVRGGGES---DLMDEFQLQDQLS 168
Query: 181 FLDESSKN-------------EDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFG 227
FL+++S N + + P + GG VH RRS S SD G
Sbjct: 169 FLNDNSANLGPKSSDLFYSQLDALSSPTGASDSVMFPSYWGGSVH---RRSCSVSDV-LG 224
Query: 228 TEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPN---KMDGFYLQ 284
+ED G+RPCLYFARG+CKNG +C+FVHGG G+ D GV+VGSPN K+D +
Sbjct: 225 SEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLGES-DGAGVVVGSPNGNNKID--MMD 281
Query: 285 QHDEIMRMKAAAHQQRLAASQFASGVSPPLPYD-KCMDFLLRQQ-NDPQRAAAATLMLND 342
Q E++R K+A Q+ AASQ G + PY K M+FLL+QQ ND QRAAAA LM+ +
Sbjct: 282 QCHELLRSKSAQQQRLAAASQLMGGSAASFPYSPKSMNFLLQQQQNDSQRAAAA-LMMGE 340
Query: 343 EFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVR 402
+ +KF + R +RND + A+RQIYLTFPADSTF++EDVSNYFSI+GPVQDVR
Sbjct: 341 DMHKFARSRLDRNDLI--------NPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVR 392
Query: 403 IPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR--QQQFER 460
IPYQQKRMFGFVTF+YPETVK+ILA+GNPHF+CD+RVLVKPYKEKGK+ +K+ QQQ ER
Sbjct: 393 IPYQQKRMFGFVTFLYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQVER 452
Query: 461 GNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIE 508
G SPC +P+G+DSRDP+DL LG++MF TQ+++ RRKLEEQA+LQQA+E
Sbjct: 453 GEFSPCGTPTGLDSRDPFDLQLGARMFYNTQDMLWRRKLEEQADLQQALE 502
>gi|357471117|ref|XP_003605843.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355506898|gb|AES88040.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 666
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 282/638 (44%), Positives = 388/638 (60%), Gaps = 87/638 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RIKS+DPENAS IMG +L ++ E++++RLA PE+L+ ++IF+A+ +
Sbjct: 1 MDGYEATKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPF-SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLD 119
LGL + S TP+S S + + F SR N+ +++ ++
Sbjct: 61 LGLPCSNNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSS---------------------- 98
Query: 120 FGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYL 179
G N P P L+ N G+ + + D N +D +++ D L
Sbjct: 99 -GFNLP-------PSLTIPNPSWGA------TTTTMSMSDQFQNHDDSDPIDDFQLQDQL 144
Query: 180 SFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACF-GTEDAGFNLGYR 238
SFL++ S DP W GG+ L HRRS S +DA G+ED LG++
Sbjct: 145 SFLNDGS------DPS---YGW------GGNSSL-HRRSCSVNDAYLAGSEDPSAGLGWK 188
Query: 239 PCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQ 298
PCLYFARG+CKNG SC+F+H GD IVGSPNK++ Q H E++R K ++HQ
Sbjct: 189 PCLYFARGYCKNGTSCRFLH---GDASAAAAAIVGSPNKIENMMDQYHHELLRSK-SSHQ 244
Query: 299 QRLAASQFASGVSPP---LPYDKCMDF---LLRQQNDPQRAAAATLMLNDEFYKFGQGRA 352
QR AA+ AS + L K M+F + QND QRAAAA LM+N+E +KFG+ R
Sbjct: 245 QRFAAAAAASQLMASNSFLCSPKGMNFLLQQQQNQNDTQRAAAAALMMNEELHKFGRSRL 304
Query: 353 ERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFG 412
ERNDF + A+RQIYLTFPADSTF++EDVS YFS FGPVQDVRIPYQQKRMFG
Sbjct: 305 ERNDFSLYSPTGMINPASRQIYLTFPADSTFREEDVSEYFSKFGPVQDVRIPYQQKRMFG 364
Query: 413 FVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSG- 471
FVTFV+PETVK IL++GNPHF+C++RVLVKPYKEKGKI +K+Q Q ++G+ SPC +P+G
Sbjct: 365 FVTFVFPETVKDILSKGNPHFVCEARVLVKPYKEKGKIPDKKQLQ-QQGDFSPCRTPTGL 423
Query: 472 VDSRDPYDLHLGSKMF--TQELMLRRKLEEQAEL-QQAIELQRRRLMNLQLPNLKNHSVH 528
VD+RD YDL L +MF T++++ RRK EQAEL QQA+E+QRRRLM LQL ++KN
Sbjct: 424 VDARDQYDLQLAERMFYNTEDMLWRRK--EQAELQQQALEIQRRRLMGLQLLDIKN---- 477
Query: 529 HHQRSLSMGSPITSPACAD--VNQNVIFP--------SFVDNSTANNSSNVTTAADQEPQ 578
HQR+LS GS + SP + +QN++ P + +++A+ SN + +A Q+
Sbjct: 478 QHQRALSTGSLVHSPTQSPNMFDQNLVLPFRRSSEFSDVIGSNSASAHSNASVSAGQQSV 537
Query: 579 KEVDAACILNNGSNNTKE--ESSKTEGSHESSAEILPC 614
K +L NG N E E+ KT SHE + C
Sbjct: 538 KGYAGKEVLVNGENGNSESNENGKTSSSHEEELNLHEC 575
>gi|14586374|emb|CAC42905.1| putative protein [Arabidopsis thaliana]
Length = 574
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/503 (50%), Positives = 329/503 (65%), Gaps = 37/503 (7%)
Query: 156 GVVDSGGNSSGNDYMEELPFNDYLSFLDES-SKNEDFTDPRSQFSNWGQDLNNGGDVHLQ 214
G D+ G G D +++ ND LSFLD+S SK ED DP ++ G+ HL
Sbjct: 80 GSADAAG---GADLLDDQQLNDCLSFLDDSCSKTEDLVDPSIPLD---YSVDGDGETHL- 132
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGS 274
HRRSFS DA F + D GF G +PC+YF+RG CKNGESCKF+HGG+ D D NG++ S
Sbjct: 133 HRRSFSC-DASFVSGDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADS 191
Query: 275 PNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAA 334
P KM+ F ++QH+E+MR+K A QQRLA+ G +P LPY+K MDFLL+Q QR
Sbjct: 192 PRKMENF-VRQHEEMMRLKLAYQQQRLASQIL--GRAPQLPYEKRMDFLLQQH--AQRDG 246
Query: 335 AATLMLNDE-FYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFS 393
L DE F+ GR ER + LAM L ++ SA+RQIYLTFPADSTFKDEDV+ YFS
Sbjct: 247 G--LPFGDERFWSSSPGRLERME-LAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFS 303
Query: 394 IFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
+FG VQDVRIPYQQKRMFGFV+F +PETVK++LARGNPHFICDSRVLVKPYKEKGK+++K
Sbjct: 304 LFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDK 363
Query: 454 R-----QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKM-FTQELMLRRKLEEQAELQQAI 507
+ QQQ ERGN SPCSSPSG+D R+ D HLGSKM + + M+RRK+ EQA+L +AI
Sbjct: 364 KQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLGSKMLYERREMMRRKI-EQADLLRAI 422
Query: 508 ELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTANNSS 567
EL+RRR +NLQLP KN +H RS S+GSP + NQ+ F S ++ + A +
Sbjct: 423 ELERRRFINLQLPEFKNSVTLNHHRSFSVGSPGYFSSAG--NQSPDFQSELNGADALKVT 480
Query: 568 NVTTAADQEPQKEVDAACILNNGSNNTKEESSKTE----GSHESSAEILPCK-FASMRKS 622
+ T + P V+ + N+ SN KEE++K+E S + +LP F S +
Sbjct: 481 DDTL--ELHPYPVVNPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLFPSASST 538
Query: 623 AEGQTPDLPASSEVHGSTAISAT 645
+ +T D S+E + +S+T
Sbjct: 539 DDHKTDD---SAETNAKVGVSST 558
>gi|296085121|emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/488 (52%), Positives = 324/488 (66%), Gaps = 45/488 (9%)
Query: 213 LQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNG--- 269
L HRRS S SD C ++D G++PCLYFARG+CKNG SC+F+HGG D V G
Sbjct: 126 LPHRRSCSVSDICLASDDPASGFGWKPCLYFARGYCKNGTSCRFLHGG--DSASVVGSEG 183
Query: 270 -VIVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYD-KCMDFLLRQQ 327
+VGSP+K++ ++Q E++R K+A Q+ AASQ + S PY KCM+FLL+QQ
Sbjct: 184 AAMVGSPSKIE--MMEQCHELLRSKSAQQQRLAAASQIMASAS--FPYSAKCMNFLLQQQ 239
Query: 328 -NDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDE 386
D QRAAAA LM+ D+ +KFG+ R ER +F+ G A + +RQIYLTFPADSTF++E
Sbjct: 240 QTDSQRAAAA-LMMGDDMHKFGRSRLERGEFMNGG-AGMVNPGSRQIYLTFPADSTFREE 297
Query: 387 DVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKE 446
DVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHF+CD+RVLVKPYKE
Sbjct: 298 DVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKE 357
Query: 447 KGKIVEKR----QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQ 500
KGK+ +K+ QQQ ERG S CS+P+G+DSRDPYDL LG++MF TQ+++ RRKLEEQ
Sbjct: 358 KGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQ 417
Query: 501 AELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACAD--VNQNVIFPSFV 558
A+LQQAIELQ RRLM LQL ++K H R+LS G+PI SP + NQ +I PS
Sbjct: 418 ADLQQAIELQGRRLMGLQLLDVKK---QQHHRALSTGAPIPSPTHSPSFFNQPLILPSDR 474
Query: 559 DNSTA---NNSSNVT------TAADQEPQKEVDAA----CILNNGSNNTKEESSKTEGSH 605
+ A N SS T AA+Q+ Q AA ++ N T +ESS E S
Sbjct: 475 SSPEAPEENCSSPATAIPVNAVAAEQQQQTVTTAAEKEFTGIDENGNGTGKESSHNEDSD 534
Query: 606 --ESSAEILP-CKFASMRKSA-EGQTPDLPASSEVHGSTAISATSSVSE---SNADMPNI 658
ES LP FAS K A E + ASSEV +T +S + +V+ +++ +P
Sbjct: 535 LPESLEHNLPDSPFASPTKGAGEYLSTFSNASSEVEKNTTVSGSPAVNGNLITSSLLPAT 594
Query: 659 TATDVVSY 666
+ D+ S+
Sbjct: 595 STLDMASF 602
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 53/63 (84%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+F+RI+++DPENASKIMG +LIQD E++++RLA GPE L+ ++I +A+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGL 63
LG+
Sbjct: 61 LGI 63
>gi|147770113|emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
Length = 682
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 309/724 (42%), Positives = 403/724 (55%), Gaps = 135/724 (18%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+F+RI+++DPENASKIMG +LIQD E++++RLA GPE L+ ++I +A+ +
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 61 LGLSSNTFSTSTPTSPSLN--NNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYL 118
LG+SSNT ST + S +NNP S+ S F+ S R++ G
Sbjct: 61 LGISSNTPSTPSTPSSPSPFLSNNPLSQSRQTS------------FSSTSSRLLGAGG-- 106
Query: 119 DFGKNSPLSNPKPSPFLSFEN-----------IRSGSCLVPSVAKNDVGVVDSGGNS--- 164
SPL+ P PS S + I S +P N + V G +S
Sbjct: 107 -LNLPSPLAIPNPSSSASSFSVFSDFQPQDDLISPNSGAIPYTNSNGINGVAVGSSSSAM 165
Query: 165 --------SGNDYMEELPFNDYLSFLDESS-----KNEDFTDPRSQFS------------ 199
GND ++E D LSFL++ S KN D + + +
Sbjct: 166 NSSSSPFYGGNDLIDEFQLQDQLSFLNDGSPTLGPKNPDLFYSQQELASSPGGGSGGDAM 225
Query: 200 -----NWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESC 254
WG N L HRRS S +GF
Sbjct: 226 GFPSYGWGAAANG-----LPHRRSCSVPSRRRLRLRSGF--------------------- 259
Query: 255 KFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPL 314
GG +G G P+K++ ++Q E++R K+A Q+ AASQ + S
Sbjct: 260 ---------GGRSHG---GXPSKIE--MMEQCHELLRSKSAQQQRLAAASQIMASAS--F 303
Query: 315 PYD-KCMDFLLRQQ-NDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQ 372
PY KCM+FLL+QQ D QRAAAA LM+ D+ +KFG+ R ER +F+ G A + +RQ
Sbjct: 304 PYSAKCMNFLLQQQQTDSQRAAAA-LMMGDDMHKFGRSRLERGEFMNGG-AGMVNPGSRQ 361
Query: 373 IYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPH 432
IYLTFPADSTF++EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA+GNPH
Sbjct: 362 IYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPH 421
Query: 433 FICDSRVLVKPYKEKGKIVEKR----QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF- 487
F+CD+RVLVKPYKEKGK+ +K+ QQQ ERG S CS+P+G+DSRDPYDL LG++MF
Sbjct: 422 FVCDARVLVKPYKEKGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQLGARMFY 481
Query: 488 -TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACA 546
TQ+++ RRKLEEQA+LQQAIELQ RRLM LQL ++K H R+LS G+PI SP +
Sbjct: 482 NTQDMLWRRKLEEQADLQQAIELQGRRLMGLQLLDVKK---QQHHRALSTGAPIPSPTHS 538
Query: 547 D--VNQNVIFPSFVDNSTA---NNSSNVT------TAADQEPQKEVDAA----CILNNGS 591
NQ +I PS + A N SS T AA+Q+ Q AA ++
Sbjct: 539 PSFFNQPLILPSDRSSPEAPEENCSSPATAIPVNAVAAEQQQQTVTTAAEKEFTGIDENG 598
Query: 592 NNTKEESSKTEGSH--ESSAEILP-CKFASMRKSA-EGQTPDLPASSEVHGSTAISATSS 647
N T +ESS E S ES LP FAS K A E + ASSEV +T +S + +
Sbjct: 599 NGTGKESSHNEDSDLPESLEHNLPDSPFASPTKGAGEYLSTFSNASSEVEKNTTVSGSPA 658
Query: 648 VSES 651
V+ S
Sbjct: 659 VNGS 662
>gi|449451727|ref|XP_004143613.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Cucumis sativus]
Length = 733
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/484 (49%), Positives = 318/484 (65%), Gaps = 53/484 (10%)
Query: 160 SGGNSSGNDYMEELPFNDYLSFLDESS-----KNEDFTDPRSQFSN-------------- 200
+ G + +D ++E D LSFL++ S KN D P + S+
Sbjct: 151 AAGGAPASDMIDEFQLQDQLSFLNDGSPTIGVKNADLFFPPADLSSSPTGGGFGSYGGDA 210
Query: 201 -WGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHG 259
WG GG VH RRS S +DAC GTED LG++PCLYFARGFCKNG SC+F+HG
Sbjct: 211 TWG-----GGPVH---RRSCSVNDACLGTEDLNCGLGWKPCLYFARGFCKNGTSCRFLHG 262
Query: 260 GFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYD-K 318
G GD DV+ VGSP+K+D ++Q E++R K++A Q+ AASQ + + PY K
Sbjct: 263 GLGDS-DVSAAAVGSPSKID--VMEQCHELLRSKSSAQQRLAAASQLMASANS-FPYSPK 318
Query: 319 CMDFLLRQQ-NDPQRAAAAT------LMLNDEFYKFGQG-RAERNDFLAMGLAEKLTSAN 370
++FLL+QQ ND QRAAAA LM+ ++ +KF + R ERN+F G A + A+
Sbjct: 319 SINFLLQQQQNDSQRAAAAAAAAAAALMMGEDLHKFSRSSRLERNEFSLNGSAGIINPAS 378
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
RQIYLTFPADSTFK+EDVSNYFS++GPVQDVRIPYQQKRMFGFVTFVYPETVKLILA+GN
Sbjct: 379 RQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGN 438
Query: 431 PHFICDSRVLVKPYKEKGKIVEK--RQQQFERGNMSPCSSPSGVDSRDPYD-LHLGSKMF 487
PHF+CD+RVLVKPYKEKGK+ +K +QQQ +R + SPC +P+G+DSR+ YD L LGS+MF
Sbjct: 439 PHFVCDARVLVKPYKEKGKVPDKYRKQQQIDR-DFSPCGTPTGLDSRELYDHLQLGSRMF 497
Query: 488 T---QELMLRRKLEEQAELQQAIELQRRRLMNLQLPNL-KNHSVHHHQRSLSMGSPITSP 543
Q+L+ RRKLEEQ Q ++LQ RRL+NLQL ++ KN HHH R+LS GSPI SP
Sbjct: 498 YNSHQDLLWRRKLEEQQADLQTLDLQSRRLLNLQLLDVKKNQLPHHHHRALSTGSPIPSP 557
Query: 544 ACAD---VNQNVIFPSFVDNSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSK 600
+ QN+IFPS + +S +N++S++ P + ++ + ++ ++ S
Sbjct: 558 THSPNPLFAQNLIFPS-IRSSGSNSTSDILRENGATPVRTPPPVSVMASSTDMPRQPSPV 616
Query: 601 TEGS 604
G+
Sbjct: 617 DNGA 620
>gi|326526009|dbj|BAJ93181.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 258/570 (45%), Positives = 337/570 (59%), Gaps = 79/570 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F RI+ +DP++A+KIMG +LIQD E++++RLA GPE L+ A++ +A+
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGLLLIQDHGEKEMIRLAFGPEALLLAVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYL 118
LGL + TPTS + ++PF SR N +
Sbjct: 61 LGLLPASSGPGTPTSAAATGHSPFMLSRQNPGRGGGGTAPSP-----LSVSSPSSWAPPP 115
Query: 119 DFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDY 178
F +++ +SN + E G L+ GG+S ++EL D
Sbjct: 116 VFSRSNSVSNGSAAE----EMAGVGEELMSPANGPQSPFFGGGGDSL---ILDELHLQDQ 168
Query: 179 LSFLDESSKNE--------DFTDPRSQFSN------WGQDLNNGGDVHLQHRRSFSASDA 224
L+FL E D + RS +G NGG HRRS S S+
Sbjct: 169 LAFLSEGGMGGGGRQLPLFDNGECRSPSGGDGGLFPYGAGWANGGP---GHRRSASVSEL 225
Query: 225 CFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQ 284
CFG D LG++PCLY+ARG+CKNG +C+FVHGGF D D+ G KMD ++
Sbjct: 226 CFGGGDG---LGWKPCLYYARGYCKNGSACRFVHGGFPD--DLAGA------KMDQAAVE 274
Query: 285 QH--DEIMRMKAAAHQQRLAASQ-FASGVSPPLP-----YDKCMDFLLRQQ----NDPQR 332
Q D ++R K+ QRLAA+ FA + LP KC+ LL+QQ ND QR
Sbjct: 275 QQCQDFLLRSKS----QRLAAAAGFAYSPTGSLPGSPSAASKCLSLLLQQQQQQQNDGQR 330
Query: 333 AAAAT----LMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDE 386
AAAA LML DE +KF + R +R DF +M + +RQIYLTFPADSTF++E
Sbjct: 331 AAAAAAAAALMLGGDEAHKFMNRPRLDRGDFASM-----MNPGSRQIYLTFPADSTFREE 385
Query: 387 DVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKE 446
DVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKE
Sbjct: 386 DVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKE 445
Query: 447 KGKIVEK-RQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRKLEE 499
KGK+ +K R+QQ ER + S C SP+G+D+RDP+DLH +G++M E++LRRKLEE
Sbjct: 446 KGKVPDKFRKQQGERVDFSSCGSPTGLDARDPFDLHQIGARMLQHSNSANEMLLRRKLEE 505
Query: 500 Q---AELQQAIELQRRRLMNLQLPNLKNHS 526
Q ELQQAIELQ RRLM LQ+ +LK S
Sbjct: 506 QQQAVELQQAIELQSRRLMGLQMLDLKTRS 535
>gi|222637701|gb|EEE67833.1| hypothetical protein OsJ_25610 [Oryza sativa Japonica Group]
Length = 696
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 281/690 (40%), Positives = 375/690 (54%), Gaps = 125/690 (18%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL + TPTS S S N+ + P ++M
Sbjct: 61 LGLLPAS-GPGTPTSVSAAAAAAHSPFMLSRQNSGRCGTAPSPLSEM------------V 107
Query: 121 GKNSPLSNPK-----PSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPF 175
G L +P PSPF G+ M+EL
Sbjct: 108 GLGDELISPANGGGPPSPFFG-----------------------------GDPLMDELQL 138
Query: 176 NDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHL------------QHRRSFSASD 223
D L+FL+E P F GGD L HRRS S S+
Sbjct: 139 QDQLAFLNEGGVPAGHQMP--MFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSE 196
Query: 224 ACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYL 283
C G D LG++PCLY+ARG+CKNG +C+FVHGG D D G KMD +
Sbjct: 197 LCLGGADG---LGWKPCLYYARGYCKNGSACRFVHGGLPD--DAAG-------KMDPSAV 244
Query: 284 QQH--DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQ---NDPQRA 333
+Q D ++R K+ QRLAA+ F + LP KC+ LL+QQ N+ QRA
Sbjct: 245 EQQCQDFLIRSKS----QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRA 300
Query: 334 AAAT-LMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSN 390
AAA LML DE +KF G+ R ER DF +M + +RQIYLTFPADSTF++EDVSN
Sbjct: 301 AAAAALMLGGDEAHKFMGRPRLERADFASM-----MNPGSRQIYLTFPADSTFREEDVSN 355
Query: 391 YFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKI 450
YFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+
Sbjct: 356 YFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKV 415
Query: 451 VEKRQQQ-FERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK---LEEQ 500
+K+Q Q ER + S C++P+G+D+RDP+D+H LG++M E++LRRK ++
Sbjct: 416 PDKKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQA 475
Query: 501 AELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSP-ACADVNQNVIFPSFVD 559
AELQQAIEL RRLM LQL + K+ R+ + +PI +P + + N S D
Sbjct: 476 AELQQAIELHSRRLMGLQLLDFKS-------RAAAAPTPIGNPFSASQTAANATGESPPD 528
Query: 560 NSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILP-CKFAS 618
+ S A +K V+ A + +T E SS S +S LP FAS
Sbjct: 529 SGELGKGSGFLLAH----KKAVNGA----DKEESTGESSSPNTDSDQSVEHNLPDSPFAS 580
Query: 619 MRKSAE-GQTPDLPASSEVH--GSTAISAT 645
KSA + P P +E+ ST SAT
Sbjct: 581 PTKSAGFARDPFAPTEAEISATASTGCSAT 610
>gi|125559631|gb|EAZ05167.1| hypothetical protein OsI_27364 [Oryza sativa Indica Group]
Length = 721
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 278/692 (40%), Positives = 386/692 (55%), Gaps = 102/692 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLSSNTFSTSTPTS---PSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF + N+ P +
Sbjct: 61 LGLLPAS-GPGTPTSVAAAAAAAHSPF-----MLSRQNSGRCGTAPSPLSVSSPSSWAPP 114
Query: 118 LDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSS----GNDYMEEL 173
F +N+ +SN +G +V + + + GG S G+ M+EL
Sbjct: 115 PVFSRNNSISN------------GAGEEMV-GLGDELISPANGGGPPSPFFGGDPLMDEL 161
Query: 174 PFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHL------------QHRRSFSA 221
D L+FL+E P F GGD L HRRS S
Sbjct: 162 QLQDQLAFLNEGGVPAGHQMP--MFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASV 219
Query: 222 SDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGF 281
S+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D D G KMD
Sbjct: 220 SELCLGGADG---LGWKPCLYYARGYCKNGSACRFVHGGLPD--DAAG-------KMDPS 267
Query: 282 YLQQH--DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQ---NDPQ 331
++Q D ++R K+ QRLAA+ F + LP KC+ LL+QQ N+ Q
Sbjct: 268 AVEQQCQDFLIRSKS----QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQ 323
Query: 332 RAAAAT-LMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
RAAAA LML DE +KF G+ R ER DF +M + +RQIYLTFPADSTF++EDV
Sbjct: 324 RAAAAAALMLGGDEAHKFMGRPRLERADFASM-----MNPGSRQIYLTFPADSTFREEDV 378
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 379 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 438
Query: 449 KIVEKRQQQ-FERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK---LE 498
K+ +K+Q Q ER + S C++P+G+D+RDP+D+H LG++M E++LRRK +
Sbjct: 439 KVPDKKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQ 498
Query: 499 EQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSP-ACADVNQNVIFPSF 557
+ AELQQAIEL RRLM LQL + K+ R+ + +PI +P + + N S
Sbjct: 499 QAAELQQAIELHSRRLMGLQLLDFKS-------RAAAAPTPIGNPFSASQTAANATGESP 551
Query: 558 VDNSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILP-CKF 616
D+ S A +K V+ A + +T E SS S +S LP F
Sbjct: 552 PDSGELGKGSGFLLAH----KKAVNGA----DKEESTGESSSPNTDSDQSVEHNLPDSPF 603
Query: 617 ASMRKSAE-GQTPDLPASSEVHGSTAISATSS 647
AS KSA + P P +E+ +T+ +++
Sbjct: 604 ASPTKSAGFARDPFAPTEAEISATTSTGCSAT 635
>gi|33146675|dbj|BAC80021.1| putative DAZ associated protein 1 [Oryza sativa Japonica Group]
Length = 682
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 282/692 (40%), Positives = 385/692 (55%), Gaps = 104/692 (15%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLSSNTFSTSTPTS---PSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF + N+ P +
Sbjct: 61 LGLLPAS-GPGTPTSVAAAAAAAHSPF-----MLSRQNSGRCGTAPSPLSVSSPSSWAPP 114
Query: 118 LDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSS----GNDYMEEL 173
F +N+ +SN +G +V + + + GG S G+ M+EL
Sbjct: 115 PVFSRNNSISN------------GAGEEMV-GLGDELISPANGGGPPSPFFGGDPLMDEL 161
Query: 174 PFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHL------------QHRRSFSA 221
D L+FL+E P F GGD L HRRS S
Sbjct: 162 QLQDQLAFLNEGGVPAGHQMP--MFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASV 219
Query: 222 SDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGF 281
S+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D D G KMD
Sbjct: 220 SELCLGGADG---LGWKPCLYYARGYCKNGSACRFVHGGLPD--DAAG-------KMDPS 267
Query: 282 YLQQH--DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQ---NDPQ 331
++Q D ++R K+ QRLAA+ F + LP KC+ LL+QQ N+ Q
Sbjct: 268 AVEQQCQDFLIRSKS----QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQ 323
Query: 332 RAAAAT-LMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
RAAAA LML DE +KF G+ R ER DF +M + +RQIYLTFPADSTF++EDV
Sbjct: 324 RAAAAAALMLGGDEAHKFMGRPRLERADFASM-----MNPGSRQIYLTFPADSTFREEDV 378
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 379 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 438
Query: 449 KIVEKRQQQ-FERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK---LE 498
K+ +K+Q Q ER + S C++P+G+D+RDP+D+H LG++M E++LRRK +
Sbjct: 439 KVPDKKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQ 498
Query: 499 EQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSP-ACADVNQNVIFPSF 557
+ AELQQAIEL RRLM LQL + K+ R+ + +PI +P + + N S
Sbjct: 499 QAAELQQAIELHSRRLMGLQLLDFKS-------RAAAAPTPIGNPFSASQTAANATGESP 551
Query: 558 VDNSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILP-CKF 616
D+ S A +K V+ A + +T E SS S +S LP F
Sbjct: 552 PDSGELGKGSGFLLAH----KKAVNGA----DKEESTGESSSPNTDSDQSVEHNLPDSPF 603
Query: 617 ASMRKSAE-GQTPDLPASSEVH--GSTAISAT 645
AS KSA + P P +E+ ST SAT
Sbjct: 604 ASPTKSAGFARDPFAPTEAEISATASTGCSAT 635
>gi|224054502|ref|XP_002298292.1| predicted protein [Populus trichocarpa]
gi|222845550|gb|EEE83097.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 225/525 (42%), Positives = 311/525 (59%), Gaps = 109/525 (20%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++A +++F+RI++++PENASKIMGY+L+QD E++++R A GPETL+ LI AK+Q
Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG SN T +SP + ++ P P + S R+ NNG+
Sbjct: 61 LGFLSN----KTSSSPFIPSSRP------------------SPLSIPSSRITNNNGFDIT 98
Query: 121 GKNSP------LSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELP 174
+SP S P + LS+ ++ +G+ + N+S + +
Sbjct: 99 NPSSPSTNSWHFSTPNSTSPLSYASVVNGASSI---------------NASSTPFQPTVS 143
Query: 175 FNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFN 234
++ + N + T P + +G +NG H+RSFS D C G+ED+
Sbjct: 144 LSNAFPY-----SNNNTTSP----TKYG---DNGS-----HKRSFSVPDTCVGSEDSNSG 186
Query: 235 LGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMR-MK 293
G++PCLYF+RGFCKNG C+FVHG D D IVGSP ++ F +Q +I+R
Sbjct: 187 FGWKPCLYFSRGFCKNGSGCRFVHG---DSADT-AAIVGSPGELYEF--EQCLQILRSKA 240
Query: 294 AAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAE 353
AA ++ AASQF +G + L ++K +DFL +QQND Q
Sbjct: 241 AAQQKKLAAASQFMAGANF-LSHNKSLDFLHQQQNDSQ---------------------- 277
Query: 354 RNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGF 413
+ ++RQIYLTFPADSTF++EDVSNYFSI+GPVQDVRIPYQQKRMFGF
Sbjct: 278 -------------SPSSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGF 324
Query: 414 VTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR---QQQFERGNMSPCSSPS 470
VTFV+ ETV+LILA+GNPHF+CDSRVLVKPYKEKGK+ +K+ QQQ ER S C SPS
Sbjct: 325 VTFVFAETVRLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKHHQQQQIEREEYSACPSPS 384
Query: 471 GVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRR 513
++SR+ +DLH+G++M TQE ML RKL+E+A+ QQAIE Q RR
Sbjct: 385 RINSREAFDLHIGARMLYNTQE-MLSRKLKEEADFQQAIESQGRR 428
>gi|242041061|ref|XP_002467925.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
gi|241921779|gb|EER94923.1| hypothetical protein SORBIDRAFT_01g036490 [Sorghum bicolor]
Length = 680
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 265/685 (38%), Positives = 377/685 (55%), Gaps = 92/685 (13%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD E++++RLA GPE+L+ A++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL ++PTS + + PF +L N+ +S + + F
Sbjct: 61 LGL----LLPASPTSVAAAGHAPFLQLPR----QNSGRAGAPSPLSVSSPSSWGHAPV-F 111
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
+++ SN + E+ +G L V + G + S + +++L + L+
Sbjct: 112 SRSNSTSNGT-----AEESTGAGEELPSPV---NGGAAPFYPHQSADALLDDLQLQEQLA 163
Query: 181 FLDESSKNEDFTDP-------RSQFSN-------WGQDLNNGGDVHLQHRRSFSASDACF 226
FL+E N P RS +G NGG H RRS S ++ C
Sbjct: 164 FLNEGGANPSHQLPGFDGGECRSPGPGDAGGMFAFGLGWPNGGPAH---RRSASVNELCL 220
Query: 227 GTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQH 286
G+ G G++PCLY+ARGFCKNG SC+FVHGG D + G+ KMD QQ
Sbjct: 221 GSGGGGDGFGWKPCLYYARGFCKNGGSCRFVHGGLPDDA---AALAGA--KMDAAADQQQ 275
Query: 287 DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQNDPQRAAAA--TLM 339
+ + QRL + F + LP KC+ FLL+QQ AAA +LM
Sbjct: 276 QQCQDFLIRSKSQRLGPAAFPYSPTGSLPGSPSAASKCLSFLLQQQQQQHDRAAAAASLM 335
Query: 340 LN--DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
L DE +KF G+ R +R DF M + +RQIYLTFPADSTF++EDVSNYFSI+G
Sbjct: 336 LGGGDEAHKFMGRPRLDRADFANM-----MNPGSRQIYLTFPADSTFREEDVSNYFSIYG 390
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQ 456
PV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+ +K ++
Sbjct: 391 PVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRK 450
Query: 457 QFERGNMSPCSS-PSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRKLEEQ---AELQQA 506
Q ++G+ S C++ P G+D+RDP+DLH LG++M EL+LRRKLEEQ AELQQA
Sbjct: 451 Q-QQGDFSGCTTPPGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQVAELQQA 509
Query: 507 IELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTANNS 566
IELQ RRLM LQL +LK + + + SP+ +P + + + V S +
Sbjct: 510 IELQSRRLMGLQLLDLKARA----AATAAAASPLPTPIANAFASSQLVSTIVVESPPESG 565
Query: 567 SNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILPCKFASMRKSAEGQ 626
+ ++ + +V+A KEES+ C A +S E
Sbjct: 566 EQLKLSSGFALEGKVNA---------GDKEESA--------------CDAADSDQSGEHN 602
Query: 627 TPDLPASSEVHGSTAISATSSVSES 651
PD P +S + + + S +E+
Sbjct: 603 LPDSPFASPTKSAALVHDSFSATET 627
>gi|115474123|ref|NP_001060660.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|122166929|sp|Q0D3J9.1|C3H53_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 53;
Short=OsC3H53
gi|113612196|dbj|BAF22574.1| Os07g0682400 [Oryza sativa Japonica Group]
gi|215767061|dbj|BAG99289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767076|dbj|BAG99304.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 682
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 281/694 (40%), Positives = 385/694 (55%), Gaps = 106/694 (15%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 61 LGLSSNTFSTSTPTS---PSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF + N+ P +
Sbjct: 61 LGLLPAS-GPGTPTSVAAAAAAAHSPF-----MLSRQNSGRCGTAPSPLSVSSPSSWAPP 114
Query: 118 LDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSS----GNDYMEEL 173
F +N+ +SN +G +V + + + GG S G+ M+EL
Sbjct: 115 PVFSRNNSISN------------GAGEEMV-GLGDELISPANGGGPPSPFFGGDPLMDEL 161
Query: 174 PFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHL------------QHRRSFSA 221
D L+FL+E P F GGD L HRRS S
Sbjct: 162 QLQDQLAFLNEGGVPAGHQMP--MFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASV 219
Query: 222 SDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGF 281
S+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D D G KMD
Sbjct: 220 SELCLGGADG---LGWKPCLYYARGYCKNGSACRFVHGGLPD--DAAG-------KMDPS 267
Query: 282 YLQQH--DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQ---NDPQ 331
++Q D ++R K+ QRLAA+ F + LP KC+ LL+QQ N+ Q
Sbjct: 268 AVEQQCQDFLIRSKS----QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQ 323
Query: 332 RAAAAT-LMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
RAAAA LML DE +KF G+ R ER DF +M + +RQIYLTFPADSTF++EDV
Sbjct: 324 RAAAAAALMLGGDEAHKFMGRPRLERADFASM-----MNPGSRQIYLTFPADSTFREEDV 378
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 379 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 438
Query: 449 KIVEKRQQQF---ERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK--- 496
K+ +K ++Q ER + S C++P+G+D+RDP+D+H LG++M E++LRRK
Sbjct: 439 KVPDKYRKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEE 498
Query: 497 LEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSP-ACADVNQNVIFP 555
++ AELQQAIEL RRLM LQL + K+ R+ + +PI +P + + N
Sbjct: 499 QQQAAELQQAIELHSRRLMGLQLLDFKS-------RAAAAPTPIGNPFSASQTAANATGE 551
Query: 556 SFVDNSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILP-C 614
S D+ S A +K V+ A + +T E SS S +S LP
Sbjct: 552 SPPDSGELGKGSGFLLAH----KKAVNGA----DKEESTGESSSPNTDSDQSVEHNLPDS 603
Query: 615 KFASMRKSAE-GQTPDLPASSEVH--GSTAISAT 645
FAS KSA + P P +E+ ST SAT
Sbjct: 604 PFASPTKSAGFARDPFAPTEAEISATASTGCSAT 637
>gi|414866608|tpg|DAA45165.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 675
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 242/558 (43%), Positives = 333/558 (59%), Gaps = 67/558 (12%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD E++++RLA GPE+L+ A++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRL---NNCSNNANNNHVSRHPFAQMSPRVV----- 112
LGL ++PTS + + PF +L N+ A + P + V
Sbjct: 61 LGL----LLPASPTSVAAAGHAPFLQLPRQNSGRAGAPSPLSVSSPSSWSHAPVFSRSNS 116
Query: 113 TNNGYLDFGKNSPLSNPKP-----SPFLSFENIRSGSCLVPSV-AKNDVGVVDSGGNSSG 166
T+NG + + P P +PF + +G L+ + + + ++ GG G
Sbjct: 117 TSNGTAEEAAGAGEELPSPVNGGAAPFFPRQ---AGDALLDDLQLQEQLAFLNEGG---G 170
Query: 167 NDYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACF 226
N P + L F ++ D F+ +G +NGG H RRS S ++ C
Sbjct: 171 N------PAHQLLGFDGGECRSPGPGDADGMFA-FGLGWHNGGPAH---RRSSSVNELCL 220
Query: 227 GTEDAGFNLG-YRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQ 285
G G + ++PCLY+ARGFCKNG SC+FVHGG D D + Q
Sbjct: 221 GGGGGGGDGFGWKPCLYYARGFCKNGGSCRFVHGGLSD--DAAALAGAKMEAAADQQQQC 278
Query: 286 HDEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQNDPQRAAAA--TL 338
D ++R K QRL + F + LP KC+ FLL+QQ AAA +L
Sbjct: 279 QDFLIRSKG----QRLGPAAFPYSPTGSLPGSPSAASKCLSFLLQQQQQQHDRAAAAASL 334
Query: 339 MLN--DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIF 395
ML DE +KF + R +R DF +M + +RQIYLTFPADSTF++EDVSNYFSI+
Sbjct: 335 MLGGGDEAHKFMARPRLDRADFASM-----MNPGSRQIYLTFPADSTFREEDVSNYFSIY 389
Query: 396 GPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQ 455
GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+ +K +
Sbjct: 390 GPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYR 449
Query: 456 QQFERGNMSPCSSPS-GVDSRDPYDLH-LGSKMFTQ-----ELMLRRKLEEQ---AELQQ 505
+Q ++G+ S C++P+ G+D+RDP+DLH LG++M EL+LRRKLEEQ AELQ
Sbjct: 450 KQ-QQGDFSGCTTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAELQH 508
Query: 506 AIELQRRRLMNLQLPNLK 523
AIELQ RRLM LQL +LK
Sbjct: 509 AIELQSRRLMGLQLLDLK 526
>gi|222624858|gb|EEE58990.1| hypothetical protein OsJ_10700 [Oryza sativa Japonica Group]
Length = 686
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 247/577 (42%), Positives = 341/577 (59%), Gaps = 106/577 (18%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD +++++RLA GPE L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL--SSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHP----FAQMSPRVVTN 114
L L S+S+PT P+ ++ SR N+ A + +AQ P +
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQP-FSRS 119
Query: 115 NGYLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSS--------- 165
NG +D E + +G L+ +SGG ++
Sbjct: 120 NGSVD------------------EVVGAGEELISPA--------NSGGGAAANAPPFFPR 153
Query: 166 -GNDYMEELPFNDYLSFLDESSKNE-------DFTDPRSQFSN-------WGQDLNNGGD 210
G+ +++ + L+FL+E N D + RS +G NGG
Sbjct: 154 GGDVLLDDFQLQEQLAFLNEGGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGP 213
Query: 211 VHLQHRRSFSASDACFGTEDA-GFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNG 269
HRRS S ++ C G + GF G++PCLY+ARGFCKNG SC+FVHG D
Sbjct: 214 ---GHRRSASVNELCLGGGSSDGF--GWKPCLYYARGFCKNGSSCRFVHG------DDAA 262
Query: 270 VIVGSPNKMDGFYLQQH---DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMD 321
+ G+ MD +Q D ++R K+ QRL + F + LP KC+
Sbjct: 263 ALTGA--AMDAATAEQQQCQDFLLRSKS----QRLGPAAFPYSPTGSLPGSPSAATKCLS 316
Query: 322 FLLRQQ-NDPQRAAAAT-LML--NDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLT 376
LL+QQ ND QRAAAA LML +DE +KF G+ R +R DF +M + +RQIYLT
Sbjct: 317 LLLQQQHNDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDFASM-----MNPGSRQIYLT 371
Query: 377 FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICD 436
FPADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD
Sbjct: 372 FPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICD 431
Query: 437 SRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMF-----TQE 490
+RVLVKPYKEKGK+ +K+ Q G+ S C++P+G+D RDP+DLH LG++M T E
Sbjct: 432 ARVLVKPYKEKGKVPDKKHQ----GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNE 487
Query: 491 LMLRRK---LEEQAELQQAIELQRRRLMNLQLPNLKN 524
+MLRRK ++ AELQQAIEL RRLM+LQL +LKN
Sbjct: 488 MMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKN 524
>gi|205688046|sp|Q10M00.2|C3H22_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 22;
Short=OsC3H22
gi|108707943|gb|ABF95738.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 688
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 246/577 (42%), Positives = 342/577 (59%), Gaps = 104/577 (18%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD +++++RLA GPE L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL--SSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHP----FAQMSPRVVTN 114
L L S+S+PT P+ ++ SR N+ A + +AQ P +
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQP-FSRS 119
Query: 115 NGYLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSS--------- 165
NG +D E + +G L+ +SGG ++
Sbjct: 120 NGSVD------------------EVVGAGEELISPA--------NSGGGAAANAPPFFPR 153
Query: 166 -GNDYMEELPFNDYLSFLDESSKNE-------DFTDPRSQFSN-------WGQDLNNGGD 210
G+ +++ + L+FL+E N D + RS +G NGG
Sbjct: 154 GGDVLLDDFQLQEQLAFLNEGGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGP 213
Query: 211 VHLQHRRSFSASDACFGTEDA-GFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNG 269
HRRS S ++ C G + GF G++PCLY+ARGFCKNG SC+FVHG D
Sbjct: 214 ---GHRRSASVNELCLGGGSSDGF--GWKPCLYYARGFCKNGSSCRFVHG------DDAA 262
Query: 270 VIVGSPNKMDGFYLQQH---DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMD 321
+ G+ MD +Q D ++R K+ QRL + F + LP KC+
Sbjct: 263 ALTGA--AMDAATAEQQQCQDFLLRSKS----QRLGPAAFPYSPTGSLPGSPSAATKCLS 316
Query: 322 FLLRQQ-NDPQRAAAAT-LML--NDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLT 376
LL+QQ ND QRAAAA LML +DE +KF G+ R +R DF +M + +RQIYLT
Sbjct: 317 LLLQQQHNDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDFASM-----MNPGSRQIYLT 371
Query: 377 FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICD 436
FPADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD
Sbjct: 372 FPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICD 431
Query: 437 SRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMF-----TQE 490
+RVLVKPYKEKGK+ +K ++ +G+ S C++P+G+D RDP+DLH LG++M T E
Sbjct: 432 ARVLVKPYKEKGKVPDKYRKH--QGDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNE 489
Query: 491 LMLRRK---LEEQAELQQAIELQRRRLMNLQLPNLKN 524
+MLRRK ++ AELQQAIEL RRLM+LQL +LKN
Sbjct: 490 MMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKN 526
>gi|218192752|gb|EEC75179.1| hypothetical protein OsI_11406 [Oryza sativa Indica Group]
Length = 686
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 246/577 (42%), Positives = 341/577 (59%), Gaps = 106/577 (18%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD +++++RLA GPE L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL--SSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHP----FAQMSPRVVTN 114
L L S+S+PT P+ ++ SR N+ A + +AQ P +
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQP-FSRS 119
Query: 115 NGYLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSS--------- 165
NG +D E + +G L+ +SGG ++
Sbjct: 120 NGSVD------------------EVVGAGEELISPA--------NSGGGAAANAPPFFPR 153
Query: 166 -GNDYMEELPFNDYLSFLDESSKNE-------DFTDPRSQFSN-------WGQDLNNGGD 210
G+ +++ + L+FL+E N D + RS +G NGG
Sbjct: 154 GGDVLLDDFQLQEQLAFLNEGGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGP 213
Query: 211 VHLQHRRSFSASDACFGTEDA-GFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNG 269
HRRS S ++ C G + GF G++PCLY+ARGFCKNG SC+FVHG D
Sbjct: 214 ---GHRRSASVNELCLGGGSSDGF--GWKPCLYYARGFCKNGSSCRFVHG------DDAA 262
Query: 270 VIVGSPNKMDGFYLQQH---DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMD 321
+ G+ MD +Q D ++R K+ QRL + F + LP KC+
Sbjct: 263 ALTGA--AMDAATAEQQQCQDFLLRSKS----QRLGPAAFPYSPTGSLPGSPSAATKCLS 316
Query: 322 FLLRQQ-NDPQRAAAAT-LML--NDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLT 376
LL+QQ ND QRAAAA LML +DE +KF G+ R +R DF +M + +RQIYLT
Sbjct: 317 LLLQQQHNDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDFASM-----MNPGSRQIYLT 371
Query: 377 FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICD 436
FPADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD
Sbjct: 372 FPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICD 431
Query: 437 SRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMF-----TQE 490
+RVLVKPYKEKGK+ +K+ Q G+ S C++P+G+D RDP+DLH LG++M T E
Sbjct: 432 ARVLVKPYKEKGKVPDKKHQ----GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNE 487
Query: 491 LMLRRK---LEEQAELQQAIELQRRRLMNLQLPNLKN 524
++LRRK ++ AELQQAIEL RRLM+LQL +LKN
Sbjct: 488 MILRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKN 524
>gi|115452803|ref|NP_001050002.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|108707942|gb|ABF95737.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113548473|dbj|BAF11916.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|215734917|dbj|BAG95639.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 246/577 (42%), Positives = 342/577 (59%), Gaps = 104/577 (18%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD +++++RLA GPE L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL--SSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHP----FAQMSPRVVTN 114
L L S+S+PT P+ ++ SR N+ A + +AQ P +
Sbjct: 61 LALLPPPPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQP-FSRS 119
Query: 115 NGYLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSS--------- 165
NG +D E + +G L+ +SGG ++
Sbjct: 120 NGSVD------------------EVVGAGEELISPA--------NSGGGAAANAPPFFPR 153
Query: 166 -GNDYMEELPFNDYLSFLDESSKNE-------DFTDPRSQFSN-------WGQDLNNGGD 210
G+ +++ + L+FL+E N D + RS +G NGG
Sbjct: 154 GGDVLLDDFQLQEQLAFLNEGGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANGGP 213
Query: 211 VHLQHRRSFSASDACFGTEDA-GFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNG 269
HRRS S ++ C G + GF G++PCLY+ARGFCKNG SC+FVHG D
Sbjct: 214 ---GHRRSASVNELCLGGGSSDGF--GWKPCLYYARGFCKNGSSCRFVHG------DDAA 262
Query: 270 VIVGSPNKMDGFYLQQH---DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMD 321
+ G+ MD +Q D ++R K+ QRL + F + LP KC+
Sbjct: 263 ALTGA--AMDAATAEQQQCQDFLLRSKS----QRLGPAAFPYSPTGSLPGSPSAATKCLS 316
Query: 322 FLLRQQ-NDPQRAAAAT-LML--NDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLT 376
LL+QQ ND QRAAAA LML +DE +KF G+ R +R DF +M + +RQIYLT
Sbjct: 317 LLLQQQHNDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDFASM-----MNPGSRQIYLT 371
Query: 377 FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICD 436
FPADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD
Sbjct: 372 FPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICD 431
Query: 437 SRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMF-----TQE 490
+RVLVKPYKEKGK+ +K ++ +G+ S C++P+G+D RDP+DLH LG++M T E
Sbjct: 432 ARVLVKPYKEKGKVPDKYRKH--QGDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNE 489
Query: 491 LMLRRK---LEEQAELQQAIELQRRRLMNLQLPNLKN 524
+MLRRK ++ AELQQAIEL RRLM+LQL +LKN
Sbjct: 490 MMLRRKLEEQQQAAELQQAIELHSRRLMDLQLLDLKN 526
>gi|357121462|ref|XP_003562439.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 699
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 255/586 (43%), Positives = 345/586 (58%), Gaps = 73/586 (12%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F RI+ +DP++A+KIMGY+LIQD E++++RLA GPE L+ +++ +A+++
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGYLLIQDHGEKEMIRLAFGPEALLHSVMAKARTE 60
Query: 61 LGLSSNTFS---TSTPTSPSLN-NNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTN 114
LGL + +S P +P+ N +PF SR N+ P +
Sbjct: 61 LGLLGHHHHHLPSSGPGTPTTAANQSPFMLSRQNSGRGLGGGGGGGTAPSPLSVSSPSSW 120
Query: 115 NGYLDFGK-NSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGND--YME 171
F + NS +SN + P+ N G G D ++
Sbjct: 121 APPPVFSRSNSVVSNGA----GEEMGGGGEELMSPA---NGGGPQHQPFFGGGGDSLVLD 173
Query: 172 ELPFNDYLSFLDESSKNED----FTDPRSQFSNWGQDLN----NGGDVHLQHRRSFSASD 223
EL D L+FL + + F S+ + G D G H HRRS S S+
Sbjct: 174 ELHLQDQLAFLGGGDRQQQQLPLFDGGGSECRSPGGDAGVFPYGAGWAH-GHRRSASVSE 232
Query: 224 ACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYL 283
CFG G LG++PC+Y+ARG+CKNG +C+FVHGG G D+ G KMD +
Sbjct: 233 LCFGGGGGGDALGWKPCMYYARGYCKNGSACRFVHGGGGFSDDLAGA------KMDQAAV 286
Query: 284 QQ--HDEIMRMKAAAHQQRLAA----SQFASGVSPPLPYDKCMDFLLRQQ---NDPQRAA 334
+Q HD ++R K+ QRLA S S P KC+ LL+Q N+ QRAA
Sbjct: 287 EQQCHDFLLRSKS----QRLAGGFPYSPTGSLPGSPSAASKCLSLLLQQHQQQNESQRAA 342
Query: 335 AAT-----LMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDED 387
AA LML DE +KF G+ R +R DF +M + +RQIYLTFPADSTF++ED
Sbjct: 343 AAAAAAAALMLGGDEAHKFMGRARLDRGDFASM-----MNPGSRQIYLTFPADSTFREED 397
Query: 388 VSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEK 447
VS YF+I+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEK
Sbjct: 398 VSTYFNIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 457
Query: 448 GKIVEK-RQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK---L 497
GK+ +K R+QQ ER + + C+SP+G+D+RDP+DLH LGS+M E++LRRK
Sbjct: 458 GKVPDKFRKQQGERMDFASCTSPTGLDARDPFDLHPLGSRMLQHSNSANEMLLRRKLEEQ 517
Query: 498 EEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSP 543
++ AELQQAIELQ RRLM LQL +LK+ RS ++ +PI +P
Sbjct: 518 QQAAELQQAIELQSRRLMGLQLLDLKS-------RSAALPTPIGNP 556
>gi|226507390|ref|NP_001152488.1| nucleic acid binding protein [Zea mays]
gi|195656755|gb|ACG47845.1| nucleic acid binding protein [Zea mays]
Length = 653
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 239/562 (42%), Positives = 328/562 (58%), Gaps = 81/562 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTS-PSLNNNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF SR N+ A + S +
Sbjct: 61 LGLLPSP-GPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPH--- 116
Query: 118 LDFGK-NSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFN 176
F + NS +SN P+ L+ + + P+ A N S ++G ++EL
Sbjct: 117 --FSRTNSVVSNGAPAEALAAD------LMSPAAAGN---APPSPFFAAGEPLLDELQLQ 165
Query: 177 DYLSFLDESSKNE------DFTDPRSQ--------FSNWGQDLNNGGDVHLQHRRSFSAS 222
+ L+FL +++ D ++ RS F NGG HRRS S S
Sbjct: 166 EQLAFLSDAAAGGHQLPLFDASECRSPGSGDAAGFFPYGALGWANGGP---GHRRSSSVS 222
Query: 223 DACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFY 282
+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D KMD
Sbjct: 223 ELCLGGAD---GLGWKPCLYYARGYCKNGSACRFVHGGLTDDATA---------KMDTAT 270
Query: 283 LQQH--DEIMRMKAAAHQQRLAASQFA-SGVSP--PLPYDKCMDFLLRQQNDPQRAA--- 334
L+Q D ++R K+ QRLAA ++ +G P P KC+ LL QQ
Sbjct: 271 LEQQCQDILLRSKS----QRLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVA 326
Query: 335 ----AATLMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
AA LML D+ +KF G+ R +R D LA + +RQIYLTFPADSTF++EDV
Sbjct: 327 AAAAAAALMLGGDDAHKFIGRPRLDRAD-----LASLVNPGSRQIYLTFPADSTFREEDV 381
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 382 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 441
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPY-DLH-LGSKMFTQ-----ELMLRRKLEEQA 501
K+ +K ++Q +G + +G+D R+ + DLH LG++M E++LRRKLEEQ
Sbjct: 442 KVPDKYRKQQLQGERAVDFFSNGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQ- 500
Query: 502 ELQQAIELQRRRLMNLQLPNLK 523
QQA+ELQ RRLM LQL +LK
Sbjct: 501 --QQAMELQSRRLMGLQLLDLK 520
>gi|413955828|gb|AFW88477.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 684
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 271/700 (38%), Positives = 369/700 (52%), Gaps = 113/700 (16%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD E++++RLA GPE+L+ A++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL P SP+ + A H PF Q+ + G
Sbjct: 61 LGLL-------LPASPT--------------SVAAAGHA---PFLQLPRQNSGRAGAPSP 96
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDS---GG------NSSGNDYME 171
S S+ +P S N S A + S GG + SG+ ++
Sbjct: 97 LSVSSPSSWGHAPAFSRSNSTSNGTGTAEEAAGAGEELPSPVNGGAAPFFPHQSGDALLD 156
Query: 172 ELPFNDYLSFLDESSKNEDFTDP--------------RSQFSNWGQDLNNGGDVHLQHRR 217
+L + L+FL+E S N P S +G NGG H RR
Sbjct: 157 DLQLQEQLAFLNEGSANPAHQLPGFVGGECRSPGPGDASGMFAFGLGWPNGGPAH---RR 213
Query: 218 SFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNK 277
S S ++ C G G G++PCLY+ARGFCKNG SC+FVHGG D G+ K
Sbjct: 214 SSSVNEFCLGGGGGGDGFGWKPCLYYARGFCKNGGSCRFVHGGLSDDA---AAFAGA--K 268
Query: 278 MDG-----FYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQ 327
M+ Q D ++R K+ QRL ++ F + LP KC+ FLL+QQ
Sbjct: 269 MEAAADQQQQQQCQDFLIRSKS----QRLGSAAFPYSSTGSLPGSPSAASKCLSFLLQQQ 324
Query: 328 NDPQRAAAA--TLMLN--DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADST 382
AAA +LML DE +KF G+ R +R DF M + +RQIYLTFPADST
Sbjct: 325 QQQHDRAAAAASLMLGGGDEAHKFMGRPRLDRADFANM-----MNPGSRQIYLTFPADST 379
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVK 442
F++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVK
Sbjct: 380 FREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVK 439
Query: 443 PYKEKGKIVEKRQQQFERGNMSPCSSPS-GVDSRDPYDLH-LGSKMFTQ-----ELMLRR 495
PYKEKGK+ +K ++ ++G+ S C++P+ G+D P+DLH LG +M EL+LRR
Sbjct: 440 PYKEKGKVPDKCRKP-QQGDFSGCTTPTGGLDGGYPFDLHQLGGRMLQHSSSANELLLRR 498
Query: 496 KLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFP 555
KLEEQ QQAIELQ RRLM LQL +LK + + + SP+ +P I
Sbjct: 499 KLEEQ---QQAIELQSRRLMGLQLLDLKA------RAAAAAASPLPTP---------IGD 540
Query: 556 SFVDNSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILPCK 615
+F +S V+T A + P +L S E ES+ E P
Sbjct: 541 AFA------SSQPVSTTAVESPSPPESGQQLLKLRSGFALEGKVNGGDKEESAREASPDA 594
Query: 616 FASMRKSAEGQTPDLPASSEVHGSTAI--SATSSVSESNA 653
S + E PD P +S + + S T++ +ES A
Sbjct: 595 ADSDQSGGEHNLPDSPFASPTKSAALLHDSFTATETESTA 634
>gi|413955827|gb|AFW88476.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 687
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 271/702 (38%), Positives = 368/702 (52%), Gaps = 114/702 (16%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD E++++RLA GPE+L+ A++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGEKEMIRLAFGPESLLHAVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL P SP+ + A H PF Q+ + G
Sbjct: 61 LGLL-------LPASPT--------------SVAAAGHA---PFLQLPRQNSGRAGAPSP 96
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDS---GG------NSSGNDYME 171
S S+ +P S N S A + S GG + SG+ ++
Sbjct: 97 LSVSSPSSWGHAPAFSRSNSTSNGTGTAEEAAGAGEELPSPVNGGAAPFFPHQSGDALLD 156
Query: 172 ELPFNDYLSFLDESSKNEDFTDP--------------RSQFSNWGQDLNNGGDVHLQHRR 217
+L + L+FL+E S N P S +G NGG H RR
Sbjct: 157 DLQLQEQLAFLNEGSANPAHQLPGFVGGECRSPGPGDASGMFAFGLGWPNGGPAH---RR 213
Query: 218 SFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNK 277
S S ++ C G G G++PCLY+ARGFCKNG SC+FVHGG D G+ K
Sbjct: 214 SSSVNEFCLGGGGGGDGFGWKPCLYYARGFCKNGGSCRFVHGGLSDDA---AAFAGA--K 268
Query: 278 MDG-----FYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQ 327
M+ Q D ++R K+ QRL ++ F + LP KC+ FLL+QQ
Sbjct: 269 MEAAADQQQQQQCQDFLIRSKS----QRLGSAAFPYSSTGSLPGSPSAASKCLSFLLQQQ 324
Query: 328 NDPQRAAAA--TLMLN--DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADST 382
AAA +LML DE +KF G+ R +R DF A + +RQIYLTFPADST
Sbjct: 325 QQQHDRAAAAASLMLGGGDEAHKFMGRPRLDRADF-----ANMMNPGSRQIYLTFPADST 379
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVK 442
F++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVK
Sbjct: 380 FREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVK 439
Query: 443 PYKEKGKIVEKRQQQF--ERGNMSPCSSPS-GVDSRDPYDLH-LGSKMFTQ-----ELML 493
PYKEKGK+ +K + ++G+ S C++P+ G+D P+DLH LG +M EL+L
Sbjct: 440 PYKEKGKVPDKCRHALKPQQGDFSGCTTPTGGLDGGYPFDLHQLGGRMLQHSSSANELLL 499
Query: 494 RRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVI 553
RRKLEEQ QQAIELQ RRLM LQL +LK + + + SP+ +P I
Sbjct: 500 RRKLEEQ---QQAIELQSRRLMGLQLLDLKA------RAAAAAASPLPTP---------I 541
Query: 554 FPSFVDNSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILP 613
+F +S V+T A + P +L S E ES+ E P
Sbjct: 542 GDAFA------SSQPVSTTAVESPSPPESGQQLLKLRSGFALEGKVNGGDKEESAREASP 595
Query: 614 CKFASMRKSAEGQTPDLPASSEVHGSTAI--SATSSVSESNA 653
S + E PD P +S + + S T++ +ES A
Sbjct: 596 DAADSDQSGGEHNLPDSPFASPTKSAALLHDSFTATETESTA 637
>gi|357119900|ref|XP_003561671.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Brachypodium distachyon]
Length = 673
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 330/565 (58%), Gaps = 84/565 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP+ A+KIMG ++IQD E++++RLA GPE+L+Q ++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDEAAKIMGLLIIQDHGEKEMIRLAFGPESLLQTVMAKARRE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNN------ANNNHVSRHPFAQMSPRVVTN 114
LGL S + S ++ P +PF +L+ ++ + + S +AQ +P N
Sbjct: 61 LGLLSASSSPTSAPRP----QSPFQQLSRQNSGRAPPSPSPLSVSSPSSWAQ-APVFSRN 115
Query: 115 NGYLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELP 174
NG ++ E++ +G+ ++ + G S +G+ +++L
Sbjct: 116 NG------------------VAPEDV-AGAGEQELMSPGNNGAAASFFPRAGDALVDDLQ 156
Query: 175 FNDYLSFLDESSKNE-----------DFTDPRSQFSNWGQDL-NNGGDVHLQHRRSFSAS 222
+ L+FL++ D D RS G + G HRRS SA+
Sbjct: 157 LQEQLAFLNDGGGATMNHAHQLGGTFDGGDCRSPGPGDGSGMFPYGLGWAPGHRRSASAN 216
Query: 223 DACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFY 282
+ G +LG++PCLY+ARGFCKNG SC+FVHG DV+ V +
Sbjct: 217 ELFLGDN----SLGWKPCLYYARGFCKNGSSCRFVHGASLQ--DVDDAPVAEQQQQ---- 266
Query: 283 LQQHDEIMRMKAAAHQQRLAASQFASGVSP-------PLPYDKCMDFLLRQQ-NDPQR-- 332
Q HD ++R K+ QRL SP P KC+ FL++QQ ND QR
Sbjct: 267 -QCHDFLLRYKS----QRLGHPSHGFPYSPTGSLPGSPSSASKCLSFLMQQQHNDNQRYL 321
Query: 333 --AAAATLMLNDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVS 389
AAA L DE +KF G+ R +R D +M +RQIYLTFPADSTF++EDVS
Sbjct: 322 LAAAAMILGGGDEAHKFMGRPRLDRTDLASM----MNNPGSRQIYLTFPADSTFREEDVS 377
Query: 390 NYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGK 449
YF ++GPV DVRIPYQQKRMFGFVTFV PETV+LILA+GNPHFICD+RVLVKPYKEKGK
Sbjct: 378 GYFRMYGPVHDVRIPYQQKRMFGFVTFVLPETVRLILAKGNPHFICDARVLVKPYKEKGK 437
Query: 450 IVEKRQQQFERGNMSPCSSPSGVDSR-DPYDLH-LGSKM-----FTQELMLRRKLEEQ-- 500
+ +K ++Q ++G+ S C++P+G+D R DP+DLH +G++M E+M+RRK EE
Sbjct: 438 VPDKYRKQQQQGDFSGCTTPNGLDGRADPFDLHQIGARMPQHSNSANEMMMRRKQEEDQQ 497
Query: 501 -AELQQAIELQRRRLMNLQLPNLKN 524
AE Q A+ELQ RRLM LQL +LK+
Sbjct: 498 AAEFQHAVELQSRRLMGLQLLDLKS 522
>gi|222624859|gb|EEE58991.1| hypothetical protein OsJ_10701 [Oryza sativa Japonica Group]
Length = 677
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 256/670 (38%), Positives = 368/670 (54%), Gaps = 106/670 (15%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD +++++RLA GPE L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL-SSNTFSTSTPTSPSLNNNNPFSRLNN--CSNNANNNHVSRHPFAQMSPRVVTNNGY 117
L L ++S+PT P+ ++ SR N+ C + ++ PF++ + + N G
Sbjct: 61 LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSN--SMGNGGA 118
Query: 118 LD--FGKNSPLSNP---------KPSPFLSFENIRSGSCLVPSVAKNDVGVV---DSGGN 163
D G L +P PF R G L+ + + + GG
Sbjct: 119 ADEMVGAGEELMSPLNGGGGAAANAPPFFP----RGGDALLTTSSCRSSSRSCTTEPGGV 174
Query: 164 SSGNDYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASD 223
+ G+ L D + +G NGG HRRS S ++
Sbjct: 175 NPGH----------ALQAFDGAECRSPGPGESGGMLPYGLAWANGGP---GHRRSASVNE 221
Query: 224 ACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYL 283
C G G G++PCLY+ARGFCKNG +C+FVHGG D ++
Sbjct: 222 LCLG----GDGFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAEQ--------Q 269
Query: 284 QQHDEIMRMKAAAHQQRLAASQFA---SGVSPPLP--YDKCMDFLLRQ---QNDPQRAAA 335
Q D ++R K+ QRL + F +G P P KC+ LL+Q ND QRAAA
Sbjct: 270 QCQDFLLRSKS----QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAA 325
Query: 336 ATLML--NDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYF 392
A LML DE +KF G+ R +R DF +M + +RQIYLTFPADSTF++EDVSNYF
Sbjct: 326 AALMLAGGDEAHKFMGRPRLDRVDFASM-----MNPGSRQIYLTFPADSTFREEDVSNYF 380
Query: 393 SIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVE 452
SI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+ +
Sbjct: 381 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 440
Query: 453 KRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK---LEEQAEL 503
K ++Q ++G+ C SP+G+D+RDP+D H LG++M ELMLRRK ++ AEL
Sbjct: 441 KYRKQ-QQGDFC-CMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAEL 498
Query: 504 QQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTA 563
QQAI+L RRL+ LQL +LK+ + H + +M P+ + N+
Sbjct: 499 QQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMS----------------LPTPITNAFT 542
Query: 564 NNSSNVTTAADQEPQK--EVDAAC-------ILNNGSN-NTKEESSKTEGSHESSAEILP 613
+ TT + P ++ A+C ++N G+ ++ E ++ S +S LP
Sbjct: 543 SGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSDQSGEHNLP 602
Query: 614 -CKFASMRKS 622
FAS KS
Sbjct: 603 DSPFASSTKS 612
>gi|115452805|ref|NP_001050003.1| Os03g0329200 [Oryza sativa Japonica Group]
gi|122247068|sp|Q10LZ9.1|C3H23_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 23;
Short=OsC3H23
gi|108707944|gb|ABF95739.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108707945|gb|ABF95740.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548474|dbj|BAF11917.1| Os03g0329200 [Oryza sativa Japonica Group]
Length = 677
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 251/674 (37%), Positives = 370/674 (54%), Gaps = 114/674 (16%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD +++++RLA GPE L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL-SSNTFSTSTPTSPSLNNNNPFSRLNN--CSNNANNNHVSRHPFAQMSPRVVTNNGY 117
L L ++S+PT P+ ++ SR N+ C + ++ PF++ + + N G
Sbjct: 61 LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSN--SMGNGGA 118
Query: 118 LDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGG--NSSGNDYMEELPF 175
D E + +G L+ + ++ G+ +++
Sbjct: 119 AD------------------EMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFEL 160
Query: 176 NDYLSFLDESSKNEDFTDPRSQFSN----------------WGQDLNNGGDVHLQHRRSF 219
+ L+FL + + + F +G NGG HRRS
Sbjct: 161 QEQLAFLHDGAGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGP---GHRRSA 217
Query: 220 SASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMD 279
S ++ C G G G++PCLY+ARGFCKNG +C+FVHGG D ++
Sbjct: 218 SVNELCLG----GDGFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAEQ----- 268
Query: 280 GFYLQQHDEIMRMKAAAHQQRLAASQFA---SGVSPPLP--YDKCMDFLLRQ---QNDPQ 331
Q D ++R K+ QRL + F +G P P KC+ LL+Q ND Q
Sbjct: 269 ---QQCQDFLLRSKS----QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQ 321
Query: 332 RAAAATLML--NDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
RAAAA LML DE +KF G+ R +R DF +M + +RQIYLTFPADSTF++EDV
Sbjct: 322 RAAAAALMLAGGDEAHKFMGRPRLDRVDFASM-----MNPGSRQIYLTFPADSTFREEDV 376
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 377 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 436
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK---LEE 499
K+ +K ++Q ++G+ C SP+G+D+RDP+D H LG++M ELMLRRK ++
Sbjct: 437 KVPDKYRKQ-QQGDFC-CMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQ 494
Query: 500 QAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVD 559
AELQQAI+L RRL+ LQL +LK+ + H + +M P+ +
Sbjct: 495 AAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMS----------------LPTPIT 538
Query: 560 NSTANNSSNVTTAADQEPQK--EVDAAC-------ILNNGSN-NTKEESSKTEGSHESSA 609
N+ + TT + P ++ A+C ++N G+ ++ E ++ S +S
Sbjct: 539 NAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSDQSGE 598
Query: 610 EILP-CKFASMRKS 622
LP FAS KS
Sbjct: 599 HNLPDSPFASSTKS 612
>gi|242051314|ref|XP_002463401.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
gi|241926778|gb|EER99922.1| hypothetical protein SORBIDRAFT_02g043180 [Sorghum bicolor]
Length = 702
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 242/573 (42%), Positives = 334/573 (58%), Gaps = 82/573 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYL 118
LGL S P +P+ ++PF SR N+ A +
Sbjct: 61 LGLLPPPAPGSGPGTPTSAAHSPFLLSRQNSGRCGAGAGTAPSPLSVSSPSSWAPPPVFS 120
Query: 119 DFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNS-------SGNDYME 171
NS +SN + L +V +D+ +GGN+ +G+ ++
Sbjct: 121 R--SNSVISN----------GAVAEEALTAAVG-DDLMSPAAGGNAPPSPFFAAGDPLLD 167
Query: 172 ELPFNDYLSFLDESSKNEDFT--DPRSQFSNWGQDLNNG----------GDVHLQHRRSF 219
EL + L+FL++++ D S+ + G G HRRS
Sbjct: 168 ELQLQEQLAFLNDAAAGHQLPLFDAASECRSPGAGDATGFFPYGGLGWANGGGPGHRRSS 227
Query: 220 SASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMD 279
S S+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D + G+ KMD
Sbjct: 228 SVSELCLGGAD---GLGWKPCLYYARGYCKNGSACRFVHGGLPDDATA---LAGA--KMD 279
Query: 280 GFYLQQH--DEIMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDFLLRQQNDPQR 332
L+Q D ++R K+ QRLAA+ F + LP KC+ LL+QQ + R
Sbjct: 280 TATLEQQCQDILLRSKS----QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQNENR 335
Query: 333 ----AAAATLMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDE 386
AAAA LML D+ +KF G+ R +R D LA + +RQIYLTFPADSTF++E
Sbjct: 336 RHAAAAAAALMLGGDDAHKFLGRPRLDRAD-----LASMMNPGSRQIYLTFPADSTFREE 390
Query: 387 DVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKE 446
DVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKE
Sbjct: 391 DVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKE 450
Query: 447 KGKIVEK-RQQQF--ERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK- 496
KGK+ +K R+QQ ER + S +G+D+RD +DLH LG++M E++LRRK
Sbjct: 451 KGKVPDKYRKQQLQGERVDFS-----NGLDARDHFDLHQLGARMLQHSHSANEMLLRRKL 505
Query: 497 ---LEEQAELQQAIELQRRRLMNLQLPNLKNHS 526
++ AELQQA+ELQ RRLM LQL +LK S
Sbjct: 506 EEQQQQAAELQQAMELQSRRLMGLQLLDLKTRS 538
>gi|414888142|tpg|DAA64156.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 661
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 238/567 (41%), Positives = 327/567 (57%), Gaps = 83/567 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTS-PSLNNNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF SR N+ A + S +
Sbjct: 61 LGLLPSP-GPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPH--- 116
Query: 118 LDFGK-NSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFN 176
F + NS +SN P+ L+ + + P+ A N S ++G ++EL
Sbjct: 117 --FSRTNSVVSNGAPAEALAAD------LMSPAAAGN---APPSPFFAAGEPLLDELQLQ 165
Query: 177 DYLSFLDESSKNE------DFTDPRSQ--------FSNWGQDLNNGGDVHLQHRRSFSAS 222
+ L+FL +++ D ++ RS F NGG HRRS S S
Sbjct: 166 EQLAFLSDAAAGGHQLPLFDASECRSPGSGDAAGFFPYGALGWANGGP---GHRRSSSVS 222
Query: 223 DACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFY 282
+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D KMD
Sbjct: 223 ELCLGGAD---GLGWKPCLYYARGYCKNGSACRFVHGGLTDDATA---------KMDTAT 270
Query: 283 LQQH--DEIMRMKAAAHQQRLAASQFA-SGVSP--PLPYDKCMDFLLRQQNDPQRAA--- 334
L+Q D ++R K+ QRLAA ++ +G P P KC+ LL QQ
Sbjct: 271 LEQQCQDILLRSKS----QRLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVA 326
Query: 335 ----AATLMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
AA LML D+ +KF G+ R +R D LA + +RQIYLTFPADSTF++EDV
Sbjct: 327 AAAAAAALMLGGDDAHKFIGRPRLDRAD-----LASLVNPGSRQIYLTFPADSTFREEDV 381
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 382 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 441
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPY-DLH-LGSKMFTQ-----ELMLRRK----- 496
K+ +K ++Q +G + +G+D R+ + DLH LG++M E++LRRK
Sbjct: 442 KVPDKYRKQQLQGERAVDFFSNGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQ 501
Query: 497 LEEQAELQQAIELQRRRLMNLQLPNLK 523
AELQQA+ELQ RRLM LQL +LK
Sbjct: 502 QAAAAELQQAMELQSRRLMRLQLLDLK 528
>gi|218192753|gb|EEC75180.1| hypothetical protein OsI_11407 [Oryza sativa Indica Group]
Length = 677
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 235/584 (40%), Positives = 340/584 (58%), Gaps = 89/584 (15%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG +LIQD +++++RLA GPE L+ +++ +A+ +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60
Query: 61 LGL-SSNTFSTSTPTSPSLNNNNPFSRLNN--CSNNANNNHVSRHPFAQMSPRVVTNNGY 117
L L ++S+PT P+ ++ SR N+ C + ++ PF++ + + N G
Sbjct: 61 LALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSN--SMGNGGA 118
Query: 118 LDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGG--NSSGNDYMEELPF 175
D E + +G L+ + ++ G+ +++
Sbjct: 119 AD------------------EMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFEL 160
Query: 176 NDYLSFLDESSKNEDFTDPRSQFSN----------------WGQDLNNGGDVHLQHRRSF 219
+ L+FL + + + F +G NGG HRRS
Sbjct: 161 QEQLAFLHDGAGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGP---GHRRSA 217
Query: 220 SASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMD 279
S ++ C G G G++PCLY+ARGFCKNG +C+FVHGG D ++
Sbjct: 218 SVNELCLG----GDGFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDAATAEQ----- 268
Query: 280 GFYLQQHDEIMRMKAAAHQQRLAASQFA---SGVSPPLP--YDKCMDFLLRQ---QNDPQ 331
Q D ++R K+ QRL + F +G P P KC+ LL+Q ND Q
Sbjct: 269 ---QQCQDFLLRSKS----QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQ 321
Query: 332 RAAAATLML--NDEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
RAAAA LML DE +KF G+ R +R DF +M + +RQIYLTFPADSTF++EDV
Sbjct: 322 RAAAAALMLAGGDEAHKFMGRPRLDRVDFASM-----MNPGSRQIYLTFPADSTFREEDV 376
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 377 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 436
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMFTQ-----ELMLRRK---LEE 499
K+ +K ++Q ++G+ C SP+G+D+RDP+D H LG++M ELMLRRK ++
Sbjct: 437 KVPDKYRKQ-QQGDFC-CMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQ 494
Query: 500 QAELQQAIELQRRRLMNLQLPNLKNHSVHH--HQRSLSMGSPIT 541
AELQQAI+L RRL+ LQL +LK+ + H ++S+ +PIT
Sbjct: 495 AAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTPIT 538
>gi|414888141|tpg|DAA64155.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 652
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 238/567 (41%), Positives = 327/567 (57%), Gaps = 83/567 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTS-PSLNNNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF SR N+ A + S +
Sbjct: 61 LGLLPSP-GPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPH--- 116
Query: 118 LDFGK-NSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFN 176
F + NS +SN P+ L+ + + P+ A N S ++G ++EL
Sbjct: 117 --FSRTNSVVSNGAPAEALAAD------LMSPAAAGN---APPSPFFAAGEPLLDELQLQ 165
Query: 177 DYLSFLDESSKNE------DFTDPRSQ--------FSNWGQDLNNGGDVHLQHRRSFSAS 222
+ L+FL +++ D ++ RS F NGG HRRS S S
Sbjct: 166 EQLAFLSDAAAGGHQLPLFDASECRSPGSGDAAGFFPYGALGWANGGP---GHRRSSSVS 222
Query: 223 DACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFY 282
+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D KMD
Sbjct: 223 ELCLGGAD---GLGWKPCLYYARGYCKNGSACRFVHGGLTDDATA---------KMDTAT 270
Query: 283 LQQH--DEIMRMKAAAHQQRLAASQFA-SGVSP--PLPYDKCMDFLLRQQNDPQRAA--- 334
L+Q D ++R K+ QRLAA ++ +G P P KC+ LL QQ
Sbjct: 271 LEQQCQDILLRSKS----QRLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVA 326
Query: 335 ----AATLMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
AA LML D+ +KF G+ R +R D LA + +RQIYLTFPADSTF++EDV
Sbjct: 327 AAAAAAALMLGGDDAHKFIGRPRLDRAD-----LASLVNPGSRQIYLTFPADSTFREEDV 381
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 382 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 441
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPY-DLH-LGSKMFTQ-----ELMLRRK----- 496
K+ +K ++Q +G + +G+D R+ + DLH LG++M E++LRRK
Sbjct: 442 KVPDKYRKQQLQGERAVDFFSNGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQ 501
Query: 497 LEEQAELQQAIELQRRRLMNLQLPNLK 523
AELQQA+ELQ RRLM LQL +LK
Sbjct: 502 QAAAAELQQAMELQSRRLMRLQLLDLK 528
>gi|224104195|ref|XP_002313354.1| predicted protein [Populus trichocarpa]
gi|222849762|gb|EEE87309.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 202/405 (49%), Positives = 254/405 (62%), Gaps = 34/405 (8%)
Query: 277 KMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAA 336
K+ ++ Q +E+MRMKAA QQ + Y+K M+FLL+QQN R AA
Sbjct: 61 KVASLFMVQQEELMRMKAAQQQQ-----------QQRMAYNKYMNFLLQQQNKTDRLGAA 109
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
M+ DEFY F + R RN F AMG+AEK SA+RQIYLTFPADS+FKDEDVSNYF FG
Sbjct: 110 AAMMGDEFYNFSRLRGGRNGFFAMGMAEKANSASRQIYLTFPADSSFKDEDVSNYFCSFG 169
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQ- 455
PVQDVRIPYQQKRMFGFVTFV+PETVK ILA+GNPH+IC+SRVLVKPYKEKGK+ K
Sbjct: 170 PVQDVRIPYQQKRMFGFVTFVHPETVKEILAKGNPHYICESRVLVKPYKEKGKVANKYGC 229
Query: 456 QQFERGNMSPCSSPSGVDSRDPYDLH--LGSKMF--TQELMLRRKLEEQAELQQAIELQR 511
+ RG + V + Y + + ++M T E+MLRRKLEEQAELQQAIELQ
Sbjct: 230 NSYLRGGIFHLLQALQVLILESYVIFTLVRARMLYNTPEIMLRRKLEEQAELQQAIELQG 289
Query: 512 RRLMNLQLPNLKNHSVHHHQRSLSMGSPIT-SPACADVNQNVIFPSFVDNS--------- 561
RRL+NLQLP+L+ VH HQRSLS+G+PI+ + +NQ I S N
Sbjct: 290 RRLINLQLPDLRGDYVHRHQRSLSVGAPISLHTHHSPINQTDILTSNGKNEITLEDEGNL 349
Query: 562 TANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILPCKFASMRK 621
+ S A +Q Q E++AA I NN + N K ES TE SH S+ E P ++ K
Sbjct: 350 SGATKSTYIAAIEQNLQDELNAAYIQNNDNVNCKVESF-TE-SHGSNVE--P---DNLTK 402
Query: 622 SAEGQTPDLPASSEVHGSTAISATSSVSESNADMPNITATDVVSY 666
S+E Q DL ++ S +S SS SE++A +P + +D SY
Sbjct: 403 SSENQHSDLFPYAKAKESNELS-VSSWSENDASVPTTSTSDEASY 446
>gi|449464832|ref|XP_004150133.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Cucumis sativus]
Length = 482
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 189/374 (50%), Positives = 241/374 (64%), Gaps = 30/374 (8%)
Query: 229 EDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDE 288
E+ G LG+RPCLY+A+GFCKNG C+F H G DGG IV N D
Sbjct: 48 EEGGLGLGWRPCLYYAKGFCKNGSGCRFFHSG--DGGRAE--IVEECN----------DV 93
Query: 289 IMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFG 348
++ + QQR+ +G P P + LL+QQ + R A A L + +E G
Sbjct: 94 VLLRSNSGVQQRMGVGS-VNGFFPYSP-TTASELLLQQQQNEMRRAVAGLSMGEESNNSG 151
Query: 349 QGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQK 408
+ R ER+DF G+ A RQIYLTFPA+S FK+EDVS YFSI+GPVQDVRIPYQQK
Sbjct: 152 RFRLERSDFSGGGMG---NPAARQIYLTFPAESCFKEEDVSKYFSIYGPVQDVRIPYQQK 208
Query: 409 RMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK--RQQQFERGNMSPC 466
RMFGFVTFVY ETVKLILA+GNPHF+CDSRVLVKPYKEKGK+ +K +QQQ ERG++SPC
Sbjct: 209 RMFGFVTFVYAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKFRKQQQMERGDLSPC 268
Query: 467 SSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKN 524
+P+G+DSRD +DLH G++M+ +Q+++ RRKLEEQA+LQQA+ELQ R+M+LQL +++
Sbjct: 269 GTPTGLDSRDLHDLHHGARMYYNSQDMLWRRKLEEQADLQQALELQALRVMSLQLADVRK 328
Query: 525 HSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNS--TANNSSNVTTAADQEPQKEVD 582
+HHH LS SPI SP NQ +F S NS N SN EPQ +
Sbjct: 329 -PLHHHT-PLSTCSPIPSP--NPFNQ-TLFHSIPTNSQLLQENGSNHLPEIRVEPQVMNN 383
Query: 583 AACILNNGSNNTKE 596
++ S+N KE
Sbjct: 384 FDLTADSDSSNGKE 397
>gi|15231090|ref|NP_190763.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|79314761|ref|NP_001030840.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|75337705|sp|Q9SV09.1|C3H46_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 46;
Short=AtC3H46
gi|4678924|emb|CAB41315.1| putative protein [Arabidopsis thaliana]
gi|23297746|gb|AAN13016.1| unknown protein [Arabidopsis thaliana]
gi|222422911|dbj|BAH19442.1| AT3G51950 [Arabidopsis thaliana]
gi|332645345|gb|AEE78866.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
gi|332645346|gb|AEE78867.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis
thaliana]
Length = 540
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 224/529 (42%), Positives = 286/529 (54%), Gaps = 128/529 (24%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+ +RI+S+DPENASKIMG +L+QD E++++RLA GPETL+ ++I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG L NCS R P++ + N
Sbjct: 61 LG------------------------LMNCS---------RSPWSHQDELISPKNN---- 83
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
+ S L NP PF + +GG SS + ND+
Sbjct: 84 -RGSSL-NPASLPFYA-----------------------NGGRSSRDLT------NDFEL 112
Query: 181 FLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPC 240
D +S++ DF G VH + G D GF G PC
Sbjct: 113 MDDMNSRSTDFL----------------GSVHARSGSCVLDGLGYGGDSDLGF--GGVPC 154
Query: 241 LYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQR 300
YFARGFCKNG SC+FVH DGG +VGSP+++ E++R + +
Sbjct: 155 SYFARGFCKNGASCRFVHS---DGG---ADLVGSPSRI---------ELLRSNSVPPR-- 197
Query: 301 LAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAM 360
A F + S P K ++ QQND QRAAAA LM+ DE K G+ R ER D AM
Sbjct: 198 -LAHHFMTRSSLPSFSTKGVNL---QQNDVQRAAAA-LMIGDELQKLGRWRPERIDLSAM 252
Query: 361 GLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPE 420
A+RQIYLTFPADS F++EDVSNYFS FGPVQDVRIPYQQKRMFGFVTFVYPE
Sbjct: 253 ACP-----ASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPE 307
Query: 421 TVKLILARGNPHFICDSRVLVKPYKEKGKIVEK-RQQQFERGNMSPCSSPSGVDSRDPYD 479
TVK ILA+GNPHF+CDSRVLVKPYKEKGK+ +K R Q + SP+G+DS P D
Sbjct: 308 TVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTEREL----SPTGLDS-SPRD 362
Query: 480 LHLGSKMF---TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNH 525
+ LG + F TQ+++ R K EE + +ELQ RRLMNLQL ++K H
Sbjct: 363 V-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDVKKH 405
>gi|21594547|gb|AAM66020.1| unknown [Arabidopsis thaliana]
Length = 540
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 225/529 (42%), Positives = 287/529 (54%), Gaps = 128/529 (24%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+ +RI+S+DPENASKIMG +L+QD E++++RLA GPETL+ ++I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG L NCS R P++ + N
Sbjct: 61 LG------------------------LMNCS---------RSPWSHQDELISPKNN---- 83
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
+ S L NP PF + +GG SS + ND+
Sbjct: 84 -RGSSL-NPASLPFYA-----------------------NGGRSSRDLT------NDFEL 112
Query: 181 FLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPC 240
D +S++ DF G VH + G D GF G PC
Sbjct: 113 MDDMNSRSTDFL----------------GSVHARSGSCVLDGLGYGGDSDLGF--GGVPC 154
Query: 241 LYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQR 300
YFARGFCKNG SC+FVH DGG +VGSP+++D +++ + R
Sbjct: 155 SYFARGFCKNGASCRFVHS---DGG---ADLVGSPSRID-----------LLRSNSVPPR 197
Query: 301 LAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAM 360
LA F + S P K ++ QQND QRAAAA LM+ DE K G+ R ER D AM
Sbjct: 198 LA-HHFMTRSSLPSFSPKGVNL---QQNDVQRAAAA-LMIGDELQKLGRWRPERIDLSAM 252
Query: 361 GLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPE 420
A+RQIYLTFPADS F++EDVSNYFS FGPVQDVRIPYQQKRMFGFVTFVYPE
Sbjct: 253 ACP-----ASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPE 307
Query: 421 TVKLILARGNPHFICDSRVLVKPYKEKGKIVEK-RQQQFERGNMSPCSSPSGVDSRDPYD 479
TVK ILA+GNPHF+CDSRVLVKPYKEKGK+ +K R Q + SP+G+DS P D
Sbjct: 308 TVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTEREL----SPTGLDS-SPRD 362
Query: 480 LHLGSKMF---TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNH 525
+ LG + F TQ+++ R K EE + +ELQ RRLMNLQL ++K H
Sbjct: 363 V-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDVKKH 405
>gi|19423979|gb|AAL87320.1| unknown protein [Arabidopsis thaliana]
Length = 540
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 224/529 (42%), Positives = 286/529 (54%), Gaps = 128/529 (24%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+ +RI+S+DPENASKIMG +L+QD E++++RLA GPETL+ ++I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG L NCS R P++ + N
Sbjct: 61 LG------------------------LMNCS---------RSPWSHQDELISPKNN---- 83
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
+ S L NP PF + +GG SS + ND+
Sbjct: 84 -RGSSL-NPASLPFYA-----------------------NGGRSSRDLT------NDFEL 112
Query: 181 FLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPC 240
D +S++ DF G VH + G D GF G PC
Sbjct: 113 MDDMNSRSTDFL----------------GSVHARSGSCVLDGLGYGGDSDLGF--GGVPC 154
Query: 241 LYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQR 300
YFARGFCKNG SC+FVH DGG +VGSP+++ E++R + +
Sbjct: 155 SYFARGFCKNGASCRFVHS---DGG---ADLVGSPSRI---------ELLRSNSVPPR-- 197
Query: 301 LAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAM 360
A F + S P K ++ QQND QRAAAA LM+ DE K G+ R ER D AM
Sbjct: 198 -LAHHFMTRSSLPSFSTKGVNL---QQNDVQRAAAA-LMIGDELQKLGRWRPERIDLSAM 252
Query: 361 GLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPE 420
A+RQIYLTFPADS F++EDVSNYFS FGPVQDVRIPYQQKRMFGFVTFVYPE
Sbjct: 253 ACP-----ASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPE 307
Query: 421 TVKLILARGNPHFICDSRVLVKPYKEKGKIVEK-RQQQFERGNMSPCSSPSGVDSRDPYD 479
TVK ILA+GNPHF+CDSRVLVKPYKEKGK+ +K R Q + SP+G+DS P D
Sbjct: 308 TVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTVREL----SPTGLDS-SPRD 362
Query: 480 LHLGSKMF---TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNH 525
+ LG + F TQ+++ R K EE + +ELQ RRLMNLQL ++K H
Sbjct: 363 V-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDVKKH 405
>gi|297847524|ref|XP_002891643.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297337485|gb|EFH67902.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 223/519 (42%), Positives = 295/519 (56%), Gaps = 117/519 (22%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD D TSI+F++I++++PENASK++GY L+QD+++RDL+R+A GP++L+Q +AKS
Sbjct: 1 MDPGDPTSIIFSKIRTLEPENASKVIGYFLLQDMEQRDLIRIAFGPDSLIQTFCRKAKSD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGLSSN FS ++ +Q SPR NG+L+
Sbjct: 61 LGLSSNGFSRPI-------------------------NIHGQSLSQSSPR----NGFLEL 91
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
+N SNP SP + +R S + + S SSG D ++ F++
Sbjct: 92 SRNP--SNPL-SPSFTSNTLRDNPNFNSSPFRESSSLFAS---SSGGDEQQQQQFSNNFL 145
Query: 181 FLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPC 240
F +K+ED F+N+ H+RSFSA+DAC +E+ GF G
Sbjct: 146 F----TKDED------PFANF-------------HKRSFSANDACLESEEPGFGGG---- 178
Query: 241 LYFARGFCKNGESCKFVHGGFGDG-GDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQ 299
G+ + F GG D G G+ GSP++MD Y+ + E+MRMK A Q+
Sbjct: 179 ----TGYHR------FPQGGLVDDFGSSAGL--GSPSEMD--YMLE--EMMRMKLA-QQK 221
Query: 300 RLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERNDFLA 359
R+ A+QF + S P+ L RQ + + Y F GR ER D
Sbjct: 222 RMVAAQFMAACSSPM--------LHRQ--------GSGHFGEEGGYYFSPGRHERED--- 262
Query: 360 MGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYP 419
S ++QIYLTFP++S+F DEDVS YFS FGPV+DVRIPYQQ+RMFGFVTF
Sbjct: 263 --------SVSKQIYLTFPSESSFTDEDVSTYFSDFGPVEDVRIPYQQQRMFGFVTFAKA 314
Query: 420 ETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQ-----FERGNMSPCSSPSGVDS 474
ETV+ ILARGNPHFICDSRVLVKPYKEKGKI++KRQQQ ERGN SP SSPS +DS
Sbjct: 315 ETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSRMDS 374
Query: 475 RDPYDLHLGSKMF---TQELMLRRKLEEQAELQQAIELQ 510
RD Y+ LG +MF TQE MLRRK EQA+LQQAIE++
Sbjct: 375 RDLYECRLGPRMFSNKTQE-MLRRKT-EQADLQQAIEVE 411
>gi|414876221|tpg|DAA53352.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 587
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/396 (48%), Positives = 251/396 (63%), Gaps = 57/396 (14%)
Query: 165 SGNDYMEELPFNDYLSFLDESSKNE-------DFTDPRSQ-------FSNWGQDLNNGGD 210
+G+ +++L + L+FL+E N D + RS +G +NGG
Sbjct: 144 AGDALLDDLQLQEQLAFLNEGGGNPAHQIQGFDGVECRSPGPGDADGMIAFGLGWHNGGP 203
Query: 211 VHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV 270
H RRS S ++ C G ++PCLY+A GFCKNG SC+FVHGG D
Sbjct: 204 AH---RRSSSVNEICLGGGGGDGFG-WKPCLYYASGFCKNGGSCRFVHGGLSDD-----A 254
Query: 271 IVGSPNKMDGFYLQQHDE---IMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDF 322
+ + KM+ QQ ++R K QRL + F + LP KC+ F
Sbjct: 255 VALAGTKMEAAADQQQQCQDFLIRSKG----QRLGPAVFPYSPTGSLPGSPSAASKCLSF 310
Query: 323 LL--RQQNDPQRAAAATLMLN--DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTF 377
LL RQQ+D + AAAA+LML DE +KF + R +R DF ++ + ++RQIYLTF
Sbjct: 311 LLQQRQQHD-RAAAAASLMLGGGDEAHKFMARPRLDRADFASL-----MNPSSRQIYLTF 364
Query: 378 PADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
PADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+
Sbjct: 365 PADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDT 424
Query: 438 RVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPS-GVDSRDPYDLH-LGSKMFTQ-----E 490
RVLVKPYKEKGK+ +K ++Q ++G+ S ++P+ G+D+RDP+DLH LG++M E
Sbjct: 425 RVLVKPYKEKGKVPDKYRKQ-QQGDFSGYTTPTGGLDARDPFDLHQLGARMLQHSNSANE 483
Query: 491 LMLRRKLEEQ---AELQQAIELQRRRLMNLQLPNLK 523
L+LRRKLEEQ AELQ AIELQ RRLM LQL +LK
Sbjct: 484 LLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLK 519
>gi|414888140|tpg|DAA64154.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 486
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 295/514 (57%), Gaps = 72/514 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTS-PSLNNNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF SR N+ A + S +
Sbjct: 61 LGLLPSP-GPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSPLSVSSPSSWAPPPH--- 116
Query: 118 LDFGK-NSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFN 176
F + NS +SN P+ L+ + + P+ A N S ++G ++EL
Sbjct: 117 --FSRTNSVVSNGAPAEALAAD------LMSPAAAGN---APPSPFFAAGEPLLDELQLQ 165
Query: 177 DYLSFLDESSKNE------DFTDPRSQ--------FSNWGQDLNNGGDVHLQHRRSFSAS 222
+ L+FL +++ D ++ RS F NGG HRRS S S
Sbjct: 166 EQLAFLSDAAAGGHQLPLFDASECRSPGSGDAAGFFPYGALGWANGGP---GHRRSSSVS 222
Query: 223 DACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFY 282
+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D KMD
Sbjct: 223 ELCLGGAD---GLGWKPCLYYARGYCKNGSACRFVHGGLTDDATA---------KMDTAT 270
Query: 283 LQQH--DEIMRMKAAAHQQRLAASQFA-SGVSP--PLPYDKCMDFLLRQQNDPQRAA--- 334
L+Q D ++R K+ QRLAA ++ +G P P KC+ LL QQ
Sbjct: 271 LEQQCQDILLRSKS----QRLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVA 326
Query: 335 ----AATLMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
AA LML D+ +KF G+ R +R D LA + +RQIYLTFPADSTF++EDV
Sbjct: 327 AAAAAAALMLGGDDAHKFIGRPRLDRAD-----LASLVNPGSRQIYLTFPADSTFREEDV 381
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 382 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 441
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPY-DLH 481
K+ +K ++Q +G + +G+D R+ + DLH
Sbjct: 442 KVPDKYRKQQLQGERAVDFFSNGLDGRENHLDLH 475
>gi|449533070|ref|XP_004173500.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 450
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/340 (52%), Positives = 239/340 (70%), Gaps = 21/340 (6%)
Query: 283 LQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYD-KCMDFLLRQQ-NDPQRAAAAT--- 337
++Q E++R K++A Q+ AASQ + + PY K ++FLL+QQ ND QRAAAA
Sbjct: 1 MEQCHELLRSKSSAQQRLAAASQLMASANS-FPYSPKSINFLLQQQQNDSQRAAAAAAAA 59
Query: 338 --LMLNDEFYKFGQG-RAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSI 394
LM+ ++ +KF + R ERN+F G A + A+RQIYLTFPADSTFK+EDVSNYFS+
Sbjct: 60 AALMMGEDLHKFSRSSRLERNEFSLNGSAGIINPASRQIYLTFPADSTFKEEDVSNYFSM 119
Query: 395 FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK- 453
+GPVQDVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHF+CD+RVLVKPYKEKGK+ +K
Sbjct: 120 YGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKY 179
Query: 454 -RQQQFERGNMSPCSSPSGVDSRDPYD-LHLGSKMFT---QELMLRRKLEEQAELQQAIE 508
+QQQ +R + SPC +P+G+DSR+ YD L LGS+MF Q+L+ RRKLEEQ Q ++
Sbjct: 180 RKQQQIDR-DFSPCGTPTGLDSRELYDHLQLGSRMFYNSHQDLLWRRKLEEQQADLQTLD 238
Query: 509 LQRRRLMNLQLPNL-KNHSVHHHQRSLSMGSPITSPACAD---VNQNVIFPSFVDNSTAN 564
LQ RRL+NLQL ++ KN HHH R+LS GSPI SP + QN+IFPS + +S +N
Sbjct: 239 LQSRRLLNLQLLDVKKNQLPHHHHRALSTGSPIPSPTHSPNPLFAQNLIFPS-IRSSGSN 297
Query: 565 NSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGS 604
++S++ P + ++ + S+ ++ S G+
Sbjct: 298 STSDILRENGATPVRTPPPVSVMASSSDMPRQPSPVDNGA 337
>gi|414888139|tpg|DAA64153.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 734
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 209/513 (40%), Positives = 285/513 (55%), Gaps = 81/513 (15%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+RI+++DP++A+KIMG++LIQD E++++RLA GPE L+ ++ +A+
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 61 LGLSSNTFSTSTPTS-PSLNNNNPF--SRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL + TPTS + ++PF SR N+ A +
Sbjct: 61 LGLLPSP-GPGTPTSVTAAATHSPFLLSRQNSGRCGAGTAPSP-----LSVSSPSSWAPP 114
Query: 118 LDFGK-NSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFN 176
F + NS +SN P+ L+ + + P+ A N S ++G ++EL
Sbjct: 115 PHFSRTNSVVSNGAPAEALAAD------LMSPAAAGN---APPSPFFAAGEPLLDELQLQ 165
Query: 177 DYLSFLDESSKNE------DFTDPRSQ--------FSNWGQDLNNGGDVHLQHRRSFSAS 222
+ L+FL +++ D ++ RS F NGG HRRS S S
Sbjct: 166 EQLAFLSDAAAGGHQLPLFDASECRSPGSGDAAGFFPYGALGWANGGP---GHRRSSSVS 222
Query: 223 DACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFY 282
+ C G D LG++PCLY+ARG+CKNG +C+FVHGG D KMD
Sbjct: 223 ELCLGGAD---GLGWKPCLYYARGYCKNGSACRFVHGGLTDDATA---------KMDTAT 270
Query: 283 LQQH--DEIMRMKAAAHQQRLAASQFA-SGVSP--PLPYDKCMDFLLRQQNDPQRAA--- 334
L+Q D ++R K+ QRLAA ++ +G P P KC+ LL QQ
Sbjct: 271 LEQQCQDILLRSKS----QRLAAFPYSPTGSVPGSPSAATKCLSLLLHQQQQQNENQRVA 326
Query: 335 ----AATLMLN-DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDV 388
AA LML D+ +KF G+ R +R D LA + +RQIYLTFPADSTF++EDV
Sbjct: 327 AAAAAAALMLGGDDAHKFIGRPRLDRAD-----LASLVNPGSRQIYLTFPADSTFREEDV 381
Query: 389 SNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG 448
SNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKG
Sbjct: 382 SNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKG 441
Query: 449 KIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLH 481
K+ +K + +SP R YD H
Sbjct: 442 KVPDKYRH----------ASPFLFSIRSTYDRH 464
>gi|15217946|ref|NP_175563.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325355|gb|AAG52614.1|AC024261_1 unknown protein; 33958-32214 [Arabidopsis thaliana]
gi|20268750|gb|AAM14078.1| unknown protein [Arabidopsis thaliana]
gi|21281143|gb|AAM45048.1| unknown protein [Arabidopsis thaliana]
gi|332194555|gb|AEE32676.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 414
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 211/523 (40%), Positives = 281/523 (53%), Gaps = 119/523 (22%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD D TSI+F++I++ + ENAS+++ Y L+QD+++RDL+R+A GP++L+Q +AK
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG SSN FS ++ + SPR NG+L+F
Sbjct: 61 LGFSSNGFSRPI-------------------------NIHGQSLSSSSPR----NGFLEF 91
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPF-NDYL 179
+N SNP S L+ +R P+ + S SS D ++ F N++L
Sbjct: 92 SRNP--SNPLSSS-LTLNTLRDNK---PNFNSSPFRESSSLFASSSGDEQQQQQFSNNFL 145
Query: 180 SFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRP 239
FT+ F+N H+RSFSA+DACF +E+ F
Sbjct: 146 -----------FTNDEDPFAN-------------SHKRSFSANDACFESEEPWFG----- 176
Query: 240 CLYFARGFCKNGESC-KFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQ 298
G C +F GG DG +GV GSP++MD Y+ + +MRMK A Q
Sbjct: 177 ----------GGNGCHQFPQGGLVDGFGSSGVF-GSPSEMD--YMLEG--MMRMKLA-QQ 220
Query: 299 QRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERNDFL 358
+ + A+QF + P+ + R + Y F QGR ER D
Sbjct: 221 KSMVAAQFMAACGSPMLH---------------RHGSGHFGEECGNY-FSQGRHERED-- 262
Query: 359 AMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVY 418
S ++QIYLTFP++S+F DEDVS YF FG V DVRIPYQQ+RM+GFVTF
Sbjct: 263 ---------SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAK 313
Query: 419 PETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQ-----FERGNMSPCSSPSGVD 473
ETV+ ILARGNPHFICDSRVLVKPYKEKGKI++KRQQQ ERGN SP SSPSG D
Sbjct: 314 AETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSGKD 373
Query: 474 SRDPYDLHLGSKMF---TQELMLRRKLEEQAELQQAIELQRRR 513
SR+ Y+ LG +MF TQE MLRRK EQA+LQ AIE++ +R
Sbjct: 374 SRELYECRLGPRMFSKKTQE-MLRRKT-EQADLQHAIEVELQR 414
>gi|30695000|ref|NP_849792.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194556|gb|AEE32677.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 513
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 233/636 (36%), Positives = 314/636 (49%), Gaps = 156/636 (24%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD D TSI+F++I++ + ENAS+++ Y L+QD+++RDL+R+A GP++L+Q +AK
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LG SSN FS ++ + SPR NG+L+F
Sbjct: 61 LGFSSNGFSRPI-------------------------NIHGQSLSSSSPR----NGFLEF 91
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPF-NDYL 179
+N SNP S L+ +R P+ + S SS D ++ F N++L
Sbjct: 92 SRNP--SNPLSSS-LTLNTLRDNK---PNFNSSPFRESSSLFASSSGDEQQQQQFSNNFL 145
Query: 180 SFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRP 239
FT+ F+N H+RSFSA+DACF +E+ F
Sbjct: 146 -----------FTNDEDPFAN-------------SHKRSFSANDACFESEEPWFG----- 176
Query: 240 CLYFARGFCKNGESC-KFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQ 298
G C +F GG DG +GV GSP++MD Y+ + +MRMK A Q
Sbjct: 177 ----------GGNGCHQFPQGGLVDGFGSSGVF-GSPSEMD--YMLEG--MMRMKLA-QQ 220
Query: 299 QRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERNDFL 358
+ + A+QF + P+ + R + Y F QGR ER D
Sbjct: 221 KSMVAAQFMAACGSPMLH---------------RHGSGHFGEECGNY-FSQGRHERED-- 262
Query: 359 AMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVY 418
S ++QIYLTFP++S+F DEDVS YF FG V DVRIPYQQ+RM+GFVTF
Sbjct: 263 ---------SVSKQIYLTFPSESSFTDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAK 313
Query: 419 PETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQ-----FERGNMSPCSSPSGVD 473
ETV+ ILARGNPHFICDSRVLVKPYKEKGKI++KRQQQ ERGN SP SSPSG D
Sbjct: 314 AETVRTILARGNPHFICDSRVLVKPYKEKGKILQKRQQQQLHELLERGNYSPSSSPSGKD 373
Query: 474 SRDPYDLHLGSKMFTQEL--MLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQ 531
SR+ Y+ LG +MF+++ MLRRK EQA+LQ AIE
Sbjct: 374 SRELYECRLGPRMFSKKTQEMLRRKT-EQADLQHAIE----------------------- 409
Query: 532 RSLSMGSPITSPACADVNQNVIFPSFVDNSTANNSSNVTTAADQEPQKEVDAACILNN-- 589
RS S+GSP P N +++F S NN+ + +K++ N
Sbjct: 410 RSPSIGSPSHFP--PRFNHSLLFQS------GNNNEEIMEGDSDRSEKDLQQVATSNEER 461
Query: 590 GSNNTKEESSKTEGSHESSAEILP-CKFASMRKSAE 624
G NN +G S LP F S +KS E
Sbjct: 462 GYNN-----GFYKGQETSLENTLPDSLFGSPKKSGE 492
>gi|413924734|gb|AFW64666.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 633
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/349 (48%), Positives = 214/349 (61%), Gaps = 58/349 (16%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGS 274
HRRSFS SDA E A +RPC+Y+ARG+CKNG SC+F+HG D
Sbjct: 137 HRRSFSLSDA----EAAA---SWRPCMYYARGYCKNGSSCRFLHGVPEDDA--------- 180
Query: 275 PNKMDGFYLQQHDEIMRMKAAA-----HQQRLAASQFASGVSPPLPYDKCMDFLLRQQND 329
++ +MR KA A QQ+L AS + SP +QQ++
Sbjct: 181 --------AEREMAVMRAKALAAAPPTQQQQLMASAYPFSPSPKGGVSLSFLLQQQQQSE 232
Query: 330 PQRAAAATLMLNDEFYKFG--QGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDED 387
QRAAA L+ ++ ++F R +R D + + A RQIYLTFPADSTF +ED
Sbjct: 233 TQRAAAGMLLGGEDMHRFPVRSPRMDRGDLIG-------SPAARQIYLTFPADSTFSEED 285
Query: 388 VSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEK 447
VSNYFS+FGPVQDVRIPYQQKRMFGFVTFVY ETVK IL++GNPHF+CD+RVLVKPYKEK
Sbjct: 286 VSNYFSMFGPVQDVRIPYQQKRMFGFVTFVYAETVKAILSKGNPHFVCDARVLVKPYKEK 345
Query: 448 GKIVE--KRQQQFERGNMS--PCSSPSG-VDSRDPYDL---HLGSKMF------TQELML 493
GK+ + ++ Q G C+SP+G +DSRDPYDL +GS+M E L
Sbjct: 346 GKVPDRFRKLQHTHHGGAEFVGCASPTGLLDSRDPYDLQQPQIGSRMMYGNIANQHEAFL 405
Query: 494 RRKLEEQ--AELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPI 540
RRKLEE+ AELQQAIEL+ RR M LQL +LK+ HHH L G+P+
Sbjct: 406 RRKLEEEQAAELQQAIELEGRRFMGLQLLDLKSRG-HHH---LGSGAPM 450
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+R++++DPENASK+MG +LIQD +++L+RLA GPE L+ + + A+++
Sbjct: 1 MDAWEATKVVFDRVRALDPENASKMMGLLLIQDNSDKELIRLAFGPEHLLHSFVATARAE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPF 84
L++ S +P L + P+
Sbjct: 61 --LAAKPASPPSPVLGPLQSGAPW 82
>gi|240255377|ref|NP_188747.5| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332642939|gb|AEE76460.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/283 (55%), Positives = 194/283 (68%), Gaps = 22/283 (7%)
Query: 360 MGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYP 419
MG+ +K SA++QIYLTFPADS+F DEDVSNYF FGPVQDVRIPYQQKRMFGFVTF++
Sbjct: 1 MGMGDKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHS 60
Query: 420 ETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-----QQQFERGNMSPCSSPSGVDS 474
ETV++ILARGNPHFICDSRVLVKPYKEKG+I+EKR QQ ERGN SP SSPSG+DS
Sbjct: 61 ETVRIILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPGSSPSGMDS 120
Query: 475 RDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQR 532
RD +D HL +MF TQE+M R+ EQA+LQQAIE QRRR ++LQLP++ + S HHQR
Sbjct: 121 RDLFDSHLAPRMFSNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQR 178
Query: 533 SLSMGSPIT-SPACADVNQNVIFPSFVDNSTANNSSNVTTAADQEPQKEVDAACILNNGS 591
SLS+GSP+ SP VNQ+++F S + + D Q E A + + G
Sbjct: 179 SLSIGSPVHFSPR---VNQSMLF-----RSESTSDEVFEGNGDSGHQSEATRAFLSDTGH 230
Query: 592 NNTKEE---SSKTEGSHESSAEILPCK-FASMRKSAEGQTPDL 630
N ++E S +G S LP FAS K+ E Q P+
Sbjct: 231 NISQERGYNSHLNKGQETSLENTLPDSFFASPSKTGETQHPEF 273
>gi|110738379|dbj|BAF01116.1| hypothetical protein [Arabidopsis thaliana]
Length = 297
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/284 (54%), Positives = 193/284 (67%), Gaps = 23/284 (8%)
Query: 360 MGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYP 419
MG+ +K SA++QIYLTFPADS+F DEDVSNYF FGPVQDVRIPYQQKRMFGFVTF++
Sbjct: 1 MGMGDKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHS 60
Query: 420 ETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQ------QQFERGNMSPCSSPSGVD 473
ETV++ILARGNPHFICDSRVLVKPYKEKG+I+E R+ QQ ERGN SP SSPSG+
Sbjct: 61 ETVRIILARGNPHFICDSRVLVKPYKEKGRILENRRQQQQLLQQMERGNFSPGSSPSGMG 120
Query: 474 SRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQ 531
SRD +D HL +MF TQE+M R+ EQA+LQQAIE QRRR ++LQLP++ + S HHQ
Sbjct: 121 SRDLFDSHLAPRMFSNTQEMMRRKA--EQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQ 178
Query: 532 RSLSMGSPIT-SPACADVNQNVIFPSFVDNSTANNSSNVTTAADQEPQKEVDAACILNNG 590
RSLS+GSP+ SP VNQ+++F S + + D Q E A + + G
Sbjct: 179 RSLSIGSPVHFSPR---VNQSMLF-----RSESTSDEVFEGNGDSGHQSEATRAFLSDTG 230
Query: 591 SNNTKEE---SSKTEGSHESSAEILP-CKFASMRKSAEGQTPDL 630
N ++E S +G S LP FAS K+ E Q P+
Sbjct: 231 HNISQERGYNSHLNKGQETSLENTLPDSFFASPSKTGETQHPEF 274
>gi|449525104|ref|XP_004169559.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Cucumis sativus]
Length = 349
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 191/271 (70%), Gaps = 14/271 (5%)
Query: 332 RAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNY 391
R A A L + +E G+ R ER+DF G+ A RQIYLTFPA+S FK+EDVS Y
Sbjct: 2 RRAVAGLSMGEESNNSGRFRLERSDFSGGGMG---NPAARQIYLTFPAESCFKEEDVSKY 58
Query: 392 FSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIV 451
FSI+GPVQDVRIPYQQKRMFGFVTFVY ETVKLILA+GNPHF+CDSRVLVKPYKEKGK+
Sbjct: 59 FSIYGPVQDVRIPYQQKRMFGFVTFVYAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVP 118
Query: 452 EK--RQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF--TQELMLRRKLEEQAELQQAI 507
+K +QQQ ERG++SPC +P+G+DSRD +DLH G++M+ +Q+++ RRKLEEQA+LQQA+
Sbjct: 119 DKFRKQQQMERGDLSPCGTPTGLDSRDLHDLHHGARMYYNSQDMLWRRKLEEQADLQQAL 178
Query: 508 ELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNS--TANN 565
ELQ R+M+LQL +++ +HHH LS SPI SP NQ +F S NS N
Sbjct: 179 ELQALRVMSLQLADVRK-PLHHHT-PLSTCSPIPSP--NPFNQ-TLFHSIPTNSQLLQEN 233
Query: 566 SSNVTTAADQEPQKEVDAACILNNGSNNTKE 596
SN EPQ + ++ S+N KE
Sbjct: 234 GSNHLPEIRVEPQVMNNFDLTADSDSSNGKE 264
>gi|414876222|tpg|DAA53353.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 625
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 179/389 (46%), Positives = 222/389 (57%), Gaps = 83/389 (21%)
Query: 165 SGNDYMEELPFNDYLSFLDESSKNE-------DFTDPRSQ-------FSNWGQDLNNGGD 210
+G+ +++L + L+FL+E N D + RS +G +NGG
Sbjct: 144 AGDALLDDLQLQEQLAFLNEGGGNPAHQIQGFDGVECRSPGPGDADGMIAFGLGWHNGGP 203
Query: 211 VHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV 270
H RRS S ++ C G ++PCLY+A GFCKNG SC+FVHGG D
Sbjct: 204 AH---RRSSSVNEICLGGGGGDGFG-WKPCLYYASGFCKNGGSCRFVHGGLSDD-----A 254
Query: 271 IVGSPNKMDGFYLQQHDE---IMRMKAAAHQQRLAASQFASGVSPPLP-----YDKCMDF 322
+ + KM+ QQ ++R K QRL + F + LP KC+ F
Sbjct: 255 VALAGTKMEAAADQQQQCQDFLIRSKG----QRLGPAVFPYSPTGSLPGSPSAASKCLSF 310
Query: 323 LL--RQQNDPQRAAAATLMLN--DEFYKF-GQGRAERNDFLAMGLAEKLTSANRQIYLTF 377
LL RQQ+D + AAAA+LML DE +KF + R +R DF ++ + ++RQIYLTF
Sbjct: 311 LLQQRQQHD-RAAAAASLMLGGGDEAHKFMARPRLDRADFASL-----MNPSSRQIYLTF 364
Query: 378 PADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
PADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+
Sbjct: 365 PADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDT 424
Query: 438 RVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKL 497
RVLVKPYKEKGK H S EL+LRRKL
Sbjct: 425 RVLVKPYKEKGK-------------------------------HSNS---ANELLLRRKL 450
Query: 498 EEQ---AELQQAIELQRRRLMNLQLPNLK 523
EEQ AELQ AIELQ RRLM LQL +LK
Sbjct: 451 EEQQQAAELQHAIELQSRRLMGLQLLDLK 479
>gi|297819906|ref|XP_002877836.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
gi|297323674|gb|EFH54095.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/303 (53%), Positives = 196/303 (64%), Gaps = 44/303 (14%)
Query: 227 GTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQH 286
G D GF G PC YFARGFCKNG SC+FVH DGG +VGSP+++
Sbjct: 142 GDSDLGF--GGVPCSYFARGFCKNGASCRFVHS---DGG---ADLVGSPSRI-------- 185
Query: 287 DEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYK 346
E++R + + A F + S P K ++ QQND QRAAAA LM+ DE K
Sbjct: 186 -ELLRSNSVPPR---LAHHFMTRSSLPSFSPKGVNL---QQNDIQRAAAA-LMIGDELQK 237
Query: 347 FGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ 406
G+ R ER D AM A+RQIYLTFPADS F++EDVSNYFS FGPVQDVRIPYQ
Sbjct: 238 LGRWRPERIDLSAMACP-----ASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQ 292
Query: 407 QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK-RQQQFERGNMSP 465
QKRMFGFVTFVYPETVK ILA+GNPHF+CDSRVLVKPYKEKGK+ +K R Q +
Sbjct: 293 QKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTEREL-- 350
Query: 466 CSSPSGVDSRDPYDLHLGSKMF---TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNL 522
SP+G+DS P D+ LG + F TQ+++ R K EE + +ELQ RRLMNLQL ++
Sbjct: 351 --SPTGLDS-SPRDV-LGGRGFYNNTQDVLWRSKFEE-----EILELQSRRLMNLQLLDV 401
Query: 523 KNH 525
K H
Sbjct: 402 KKH 404
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 12/147 (8%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+ +RI+S+DPENASKIMG +L+QD E++++RLA GPETL+ ++I +AK +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL + SP + + S NN ++ N + + S R +TN+ L
Sbjct: 61 LGL------MNCSRSPWSHQDELISPKNNRGSSLNPASLPFYANGGRSSRDLTNDFELMD 114
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLV 147
NS S FL + RSGSC++
Sbjct: 115 DVNS------RSDFLGSVHARSGSCVL 135
>gi|414882093|tpg|DAA59224.1| TPA: putative RNA-binding zinc finger family protein isoform 1 [Zea
mays]
gi|414882094|tpg|DAA59225.1| TPA: putative RNA-binding zinc finger family protein isoform 2 [Zea
mays]
Length = 629
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 287/551 (52%), Gaps = 77/551 (13%)
Query: 164 SSGNDYMEELPFNDYLSF---LDESSKNED--FTDPRSQFSNWGQDLNNGGDVHLQHRRS 218
++G+D+ + PF L+ D + D F D +S G HRRS
Sbjct: 89 TAGSDHQHQAPFAADLALGYDFDGAGAGADAFFPDDYDCWSPAGA----------AHRRS 138
Query: 219 FSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKM 278
FS SDA AG +RPC+YFARGFCKNG SC+F+HG F + D +
Sbjct: 139 FSLSDAEATAAAAG-GAAWRPCMYFARGFCKNGSSCRFLHG-FPEDDDAAA-------ER 189
Query: 279 DGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLL---RQQNDPQRAAA 335
+ ++ QQ+L AS F SPP + ++FLL +QQN+PQRAAA
Sbjct: 190 EMVVMRAKALAAAAARPQQQQQLMASAFPFSPSPPKGVN--LNFLLHQHQQQNEPQRAAA 247
Query: 336 ATLML---NDEFYKFGQGRAERNDFLAMGLAEKLTS-ANRQIYLTFPADSTFKDEDVSNY 391
A ML D+ + R+ R M E ++S A RQIYLTFPADSTF +EDVSNY
Sbjct: 248 AAAMLLQGGDDMHSRFPVRSPR-----MDRGELMSSPAARQIYLTFPADSTFSEEDVSNY 302
Query: 392 FSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIV 451
FS++GPVQDVRIPYQQKRMFGFVTFVY ETVK+IL++GNPHF+CD+RVLVKPYKEKGK+
Sbjct: 303 FSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVP 362
Query: 452 E--KRQQQFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF-----TQELMLRRK---L 497
+ ++ Q G+ + C+SP+G +DSRDP+DL +G +M E LRRK
Sbjct: 363 DRFRKLQHPHHGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQ 422
Query: 498 EEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRS--------LSMGSPITSPACADVN 549
++ AELQQAIEL+ RR M L L +LK+ HH S L G A+ N
Sbjct: 423 QQAAELQQAIELEGRRFMGLHLLDLKSRGHHHLGSSPAAMATTTLGQGDDGCKGRSANGN 482
Query: 550 QNVIF-----PSFVDNSTANNSSNVTTAA---------DQEPQKEVDAACILNNGSNNTK 595
N + + D T NS+++ + +E Q++ D N K
Sbjct: 483 DNAVAFHLEDANIQDTPTKMNSNSLAMSGGPAAGAGGEHEEQQQDGDGDGSPKQAVNPGK 542
Query: 596 EESSKTEGSHESSAEILPCKFASMRKSAEGQTPDLPASSEVHGSTAISATSSVSESNADM 655
EE KTE ++ I+ C F E PD P +S ST + S + S+
Sbjct: 543 EE--KTESGPVTATPIVACGFQE-SGVVEHILPDSPFASPSKASTQNGSIISNAASSLFP 599
Query: 656 PNITATDVVSY 666
P + ++ Y
Sbjct: 600 PPASTMELPPY 610
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT +F+R++++DP+NASKIMG +LIQD +++L+RLA GP+ L+ A + A++
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LGLSSNTFSTSTPTSPSLNN-NNPFSRLNNCSNNANNNHVSRHPFA 105
L ++P SP L + + + S A ++H + PFA
Sbjct: 61 LAA-----KPASPPSPVLGPLHQTWGAPPHPSPTAGSDHQHQAPFA 101
>gi|414882092|tpg|DAA59223.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 630
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 215/554 (38%), Positives = 288/554 (51%), Gaps = 82/554 (14%)
Query: 164 SSGNDYMEELPFNDYLSF---LDESSKNED--FTDPRSQFSNWGQDLNNGGDVHLQHRRS 218
++G+D+ + PF L+ D + D F D +S G HRRS
Sbjct: 89 TAGSDHQHQAPFAADLALGYDFDGAGAGADAFFPDDYDCWSPAGA----------AHRRS 138
Query: 219 FSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKM 278
FS SDA AG +RPC+YFARGFCKNG SC+F+HG F + D +
Sbjct: 139 FSLSDAEATAAAAG-GAAWRPCMYFARGFCKNGSSCRFLHG-FPEDDDAAA-------ER 189
Query: 279 DGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLL---RQQNDPQRAAA 335
+ ++ QQ+L AS F SPP + ++FLL +QQN+PQRAAA
Sbjct: 190 EMVVMRAKALAAAAARPQQQQQLMASAFPFSPSPPKGVN--LNFLLHQHQQQNEPQRAAA 247
Query: 336 ATLML---NDEFYKFGQGRAERNDFLAMGLAEKLTS-ANRQIYLTFPADSTFKDEDVSNY 391
A ML D+ + R+ R M E ++S A RQIYLTFPADSTF +EDVSNY
Sbjct: 248 AAAMLLQGGDDMHSRFPVRSPR-----MDRGELMSSPAARQIYLTFPADSTFSEEDVSNY 302
Query: 392 FSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIV 451
FS++GPVQDVRIPYQQKRMFGFVTFVY ETVK+IL++GNPHF+CD+RVLVKPYKEKGK+
Sbjct: 303 FSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVP 362
Query: 452 E--KRQQQFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF-----TQELMLRRK---L 497
+ ++ Q G+ + C+SP+G +DSRDP+DL +G +M E LRRK
Sbjct: 363 DRFRKLQHPHHGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQ 422
Query: 498 EEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRS--------LSMGSPITSPACADVN 549
++ AELQQAIEL+ RR M L L +LK+ HH S L G A+ N
Sbjct: 423 QQAAELQQAIELEGRRFMGLHLLDLKSRGHHHLGSSPAAMATTTLGQGDDGCKGRSANGN 482
Query: 550 QNVIFPSF--------VDNSTANNSSNVTTAA---------DQEPQKEVDAACILNNGSN 592
N + +F D T NS+++ + +E Q++ D N
Sbjct: 483 DNAV--AFHLEDANIQADTPTKMNSNSLAMSGGPAAGAGGEHEEQQQDGDGDGSPKQAVN 540
Query: 593 NTKEESSKTEGSHESSAEILPCKFASMRKSAEGQTPDLPASSEVHGSTAISATSSVSESN 652
KEE KTE ++ I+ C F E PD P +S ST + S + S+
Sbjct: 541 PGKEE--KTESGPVTATPIVACGFQE-SGVVEHILPDSPFASPSKASTQNGSIISNAASS 597
Query: 653 ADMPNITATDVVSY 666
P + ++ Y
Sbjct: 598 LFPPPASTMELPPY 611
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT +F+R++++DP+NASKIMG +LIQD +++L+RLA GP+ L+ A + A++
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LGLSSNTFSTSTPTSPSLNN-NNPFSRLNNCSNNANNNHVSRHPFA 105
L ++P SP L + + + S A ++H + PFA
Sbjct: 61 LAA-----KPASPPSPVLGPLHQTWGAPPHPSPTAGSDHQHQAPFA 101
>gi|212722294|ref|NP_001131248.1| uncharacterized protein LOC100192560 [Zea mays]
gi|195656461|gb|ACG47698.1| nucleic acid binding protein [Zea mays]
Length = 629
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 213/551 (38%), Positives = 286/551 (51%), Gaps = 77/551 (13%)
Query: 164 SSGNDYMEELPFNDYLSF---LDESSKNED--FTDPRSQFSNWGQDLNNGGDVHLQHRRS 218
++G+D+ + PF L+ D + D F D +S G HRRS
Sbjct: 89 TAGSDHQHQAPFAADLALGYDFDGAGAGADAFFPDDYDCWSPAGA----------AHRRS 138
Query: 219 FSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKM 278
FS SDA AG +RPC+YFARGFCKNG SC+F+HG F + D +
Sbjct: 139 FSLSDAEATAAAAG-GAAWRPCMYFARGFCKNGSSCRFLHG-FPEDDDAAA-------ER 189
Query: 279 DGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLL---RQQNDPQRAAA 335
+ ++ QQ+L AS F SPP + ++FLL +QQN+PQRAAA
Sbjct: 190 EMVVMRAKALAAAAARPQQQQQLMASAFPFSPSPPKGVN--LNFLLHQHQQQNEPQRAAA 247
Query: 336 ATLML---NDEFYKFGQGRAERNDFLAMGLAEKLTS-ANRQIYLTFPADSTFKDEDVSNY 391
A ML D+ + R+ R M E ++S A RQIYLTFPADSTF +EDVS Y
Sbjct: 248 AAAMLLQGGDDMHSRFPVRSPR-----MDRGELMSSPAARQIYLTFPADSTFSEEDVSIY 302
Query: 392 FSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIV 451
FS++GPVQDVRIPYQQKRMFGFVTFVY ETVK+IL++GNPHF+CD+RVLVKPYKEKGK+
Sbjct: 303 FSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKGNPHFVCDARVLVKPYKEKGKVP 362
Query: 452 E--KRQQQFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF-----TQELMLRRK---L 497
+ ++ Q G+ + C+SP+G +DSRDP+DL +G +M E LRRK
Sbjct: 363 DRFRKLQHPHHGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQ 422
Query: 498 EEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRS--------LSMGSPITSPACADVN 549
++ AELQQAIEL+ RR M L L +LK+ HH S L G A+ N
Sbjct: 423 QQAAELQQAIELEGRRFMVLHLLDLKSRGHHHLGSSPAAMATTTLGQGDDGCKGRSANGN 482
Query: 550 QNVIF-----PSFVDNSTANNSSNVTTAA---------DQEPQKEVDAACILNNGSNNTK 595
N + + D T NS+++ + +E Q++ D N K
Sbjct: 483 DNAVAFHLEDANIQDTPTKMNSNSLAMSGGPAAGAGGEHEEQQQDGDGDGSPKQAVNPGK 542
Query: 596 EESSKTEGSHESSAEILPCKFASMRKSAEGQTPDLPASSEVHGSTAISATSSVSESNADM 655
EE KTE ++ I+ C F E PD P +S ST + S + S+
Sbjct: 543 EE--KTESGPVTATPIVACGFQE-SGVVEHILPDSPFASPSKASTQNGSIISNAASSLFP 599
Query: 656 PNITATDVVSY 666
P + ++ Y
Sbjct: 600 PPASTMELPPY 610
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT +F+R++++DP+NASKIMG +LIQD +++L+RLA GP+ L+ A + A++
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVSAARAD 60
Query: 61 LGLSSNTFSTSTPTSPSLNN-NNPFSRLNNCSNNANNNHVSRHPFA 105
L ++P SP L + + + S A ++H + PFA
Sbjct: 61 LAA-----KPASPPSPVLGPLHQTWGAPPHPSPTAGSDHQHQAPFA 101
>gi|242082672|ref|XP_002441761.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
gi|241942454|gb|EES15599.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
Length = 637
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/348 (47%), Positives = 208/348 (59%), Gaps = 55/348 (15%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGS 274
HRRSFS SDA A +RPC+YFARGFCKNG SC+F+H G
Sbjct: 143 HRRSFSLSDA--EVAGAAGAGAWRPCMYFARGFCKNGSSCRFLH--------------GL 186
Query: 275 PNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKC------MDFLLRQQN 328
P D ++ +MR KA A + Q + P ++FLL N
Sbjct: 187 PEDDDAATAEREMVVMRAKALAAARSQQQQQQLMASAFPFSPSPSPPKGVNLNFLLHHHN 246
Query: 329 ------DPQRAAAAT---LMLN----DEFYKFGQGRAERNDFLAMGLAEKLTS-ANRQIY 374
+PQRAAAA ++L D+ + R+ R M E ++S A RQIY
Sbjct: 247 QQQQQNEPQRAAAAAAAAMLLQGGGGDDMHGRFPVRSPR-----MDRGELMSSPAARQIY 301
Query: 375 LTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFI 434
LTFPADSTF +EDVSNYFS++GPVQDVRIPYQQKRMFGFVTFVY ETVK+IL++GNPHF+
Sbjct: 302 LTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVKIILSKGNPHFV 361
Query: 435 CDSRVLVKPYKEKGKIVE--KRQQQFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF- 487
CD+RVLVKPYKEKGK+ + ++ Q G+ + C+SP+G +DSRDP+DL +G +M
Sbjct: 362 CDARVLVKPYKEKGKVPDRFRKLQHPHHGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMMY 421
Query: 488 ----TQELMLRRKLEEQ---AELQQAIELQRRRLMNLQLPNLKNHSVH 528
E LRRKLEEQ AELQQAIEL+ RR M L L +LK+ H
Sbjct: 422 GNIANHEAFLRRKLEEQHQAAELQQAIELEGRRFMGLHLLDLKSRGHH 469
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 44/54 (81%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALI 54
MD ++AT +F+R++++DP+NASKIMG +LIQD +++L+RLA GP+ L+ A +
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFV 54
>gi|357161178|ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
[Brachypodium distachyon]
Length = 612
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 219/368 (59%), Gaps = 53/368 (14%)
Query: 201 WGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGG 260
WG+ QHRRS S SDA + AG G++PCLY+ARGFCKNG SC+FVHGG
Sbjct: 110 WGEQQQQ------QHRRSLSLSDA----DAAG---GWKPCLYYARGFCKNGGSCRFVHGG 156
Query: 261 FGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCM 320
D + + + D AA + L AS F SP + +
Sbjct: 157 LPD----HALAAAEQDMGD-------AIRAARAEAAVRSELMASAFPFSPSP-----RGL 200
Query: 321 DFLLRQQNDPQRAAA-------ATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQI 373
+FLL+QQ Q + D+ +KF R+ R D LA A RQI
Sbjct: 201 NFLLQQQQHQQSDSQRAAAAMMLAGGGGDDMHKFAV-RSPRLDRCVSDLAS--NPAARQI 257
Query: 374 YLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHF 433
YLTFPADSTF +EDVS+YFS++GPVQDVRIPYQQKRMFGFVTFVY ETV+LILA+GNPHF
Sbjct: 258 YLTFPADSTFSEEDVSSYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVRLILAKGNPHF 317
Query: 434 ICDSRVLVKPYKEKGKIVEKRQQ--QFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF 487
+CD+RVLVKPYKEKGK+ ++ ++ +G+ + ++P+G +DSRDP+DL +G +M
Sbjct: 318 VCDARVLVKPYKEKGKVPDRFRKFPHAHQGDFAGSTTPTGLLDSRDPFDLQSPQIGPRMM 377
Query: 488 -----TQELMLRRK---LEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSP 539
+ E LRRK ++ AELQQAI+LQ RR M LQL ++K+ HHH + +GSP
Sbjct: 378 YANMGSHEAFLRRKLEEQQQAAELQQAIDLQGRRFMGLQLMDMKSRGHHHHHLASPIGSP 437
Query: 540 ITSPACAD 547
+ AD
Sbjct: 438 VGLRHLAD 445
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F R++++DPE ASKIMG +L+QD E D++RLA GPE L+ ++ RA++
Sbjct: 1 MDAYEATKVVFARVQALDPELASKIMGMLLVQDRSEEDMIRLAFGPEHLLHTVVARARAD 60
Query: 61 L 61
+
Sbjct: 61 I 61
>gi|293333413|ref|NP_001169691.1| uncharacterized protein LOC100383572 [Zea mays]
gi|224030935|gb|ACN34543.1| unknown [Zea mays]
Length = 630
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 207/339 (61%), Gaps = 46/339 (13%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGS 274
HRRSFS SDA AG +RPC+YFARGFCKNG +C+F+H G+ +
Sbjct: 128 HRRSFSLSDAELAAAAAGPGA-WRPCMYFARGFCKNGSACRFLH----------GLPEPA 176
Query: 275 PN--KMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLL----RQQN 328
P+ + + ++ QQ+L AS F SP P ++ LL +QQ+
Sbjct: 177 PDAAEREMAVMRAKALAAAAARPQQQQQLMASAFPFSPSPSPPKGANLNLLLHHHYQQQS 236
Query: 329 DPQRAAAATL--------MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPAD 380
+PQRA AA L M + F GR +R + ++ + A RQIYLTFPAD
Sbjct: 237 EPQRAGAAMLLQGGGGDDMHSSRFPLRSPGRMDRGELVS-------SPAARQIYLTFPAD 289
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVL 440
STF ++DVSNYFS++GPVQDVRIPYQQKRMFGFV+FVY ETV++IL +GNPHF+CD+RVL
Sbjct: 290 STFGEDDVSNYFSMYGPVQDVRIPYQQKRMFGFVSFVYAETVRIILCKGNPHFVCDARVL 349
Query: 441 VKPYKEKGKIVE--KRQQQFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF-----TQ 489
VKPYKEKGK+ + ++ Q G+ + C+SP+G +DSRDP+DL +G +M
Sbjct: 350 VKPYKEKGKVPDRFRKLQHPHLGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNIANH 409
Query: 490 ELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVH 528
E LRRKLEEQ QQAIEL+ RR M L L +LK H
Sbjct: 410 EAFLRRKLEEQ---QQAIELEGRRFMGLHLLDLKIRGHH 445
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 42/51 (82%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQ 51
MD ++AT +F+R++++DP+NASKIMG +LIQD +++L+RLA GP+ ++
Sbjct: 1 MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHILH 51
>gi|224029225|gb|ACN33688.1| unknown [Zea mays]
Length = 605
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 207/339 (61%), Gaps = 46/339 (13%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGS 274
HRRSFS SDA AG +RPC+YFARGFCKNG +C+F+H G+ +
Sbjct: 103 HRRSFSLSDAELAAAAAGPGA-WRPCMYFARGFCKNGSACRFLH----------GLPEPA 151
Query: 275 PN--KMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLL----RQQN 328
P+ + + ++ QQ+L AS F SP P ++ LL +QQ+
Sbjct: 152 PDAAEREMAVMRAKALAAAAARPQQQQQLMASAFPFSPSPSPPKGANLNLLLHHHYQQQS 211
Query: 329 DPQRAAAATL--------MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPAD 380
+PQRA AA L M + F GR +R + ++ + A RQIYLTFPAD
Sbjct: 212 EPQRAGAAMLLQGGGGDDMHSSRFPLRSPGRMDRGELVS-------SPAARQIYLTFPAD 264
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVL 440
STF ++DVSNYFS++GPVQDVRIPYQQKRMFGFV+FVY ETV++IL +GNPHF+CD+RVL
Sbjct: 265 STFGEDDVSNYFSMYGPVQDVRIPYQQKRMFGFVSFVYAETVRIILCKGNPHFVCDARVL 324
Query: 441 VKPYKEKGKIVE--KRQQQFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF-----TQ 489
VKPYKEKGK+ + ++ Q G+ + C+SP+G +DSRDP+DL +G +M
Sbjct: 325 VKPYKEKGKVPDRFRKLQHPHLGDFAGCTSPTGLLDSRDPFDLQQPQIGPRMMYGNIANH 384
Query: 490 ELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVH 528
E LRRKLEEQ QQAIEL+ RR M L L +LK H
Sbjct: 385 EAFLRRKLEEQ---QQAIELEGRRFMGLHLLDLKIRGHH 420
>gi|414866607|tpg|DAA45164.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 356
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 148/181 (81%), Gaps = 16/181 (8%)
Query: 353 ERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFG 412
+R DF +M + +RQIYLTFPADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFG
Sbjct: 33 DRADFASM-----MNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFG 87
Query: 413 FVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPS-G 471
FVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+ +K ++Q ++G+ S C++P+ G
Sbjct: 88 FVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QQGDFSGCTTPTGG 146
Query: 472 VDSRDPYDLH-LGSKMFTQ-----ELMLRRKLEEQ---AELQQAIELQRRRLMNLQLPNL 522
+D+RDP+DLH LG++M EL+LRRKLEEQ AELQ AIELQ RRLM LQL +L
Sbjct: 147 LDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDL 206
Query: 523 K 523
K
Sbjct: 207 K 207
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 30/33 (90%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQD 33
MD ++AT ++F+RI+++DP++A+KIMG +LIQD
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQD 33
>gi|414866609|tpg|DAA45166.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 317
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 142/168 (84%), Gaps = 11/168 (6%)
Query: 366 LTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLI 425
+ +RQIYLTFPADSTF++EDVSNYFSI+GPV DVRIPYQQKRMFGFVTFVYPETVKLI
Sbjct: 2 MNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLI 61
Query: 426 LARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPS-GVDSRDPYDLH-LG 483
LA+GNPHFICD+RVLVKPYKEKGK+ +K ++Q ++G+ S C++P+ G+D+RDP+DLH LG
Sbjct: 62 LAKGNPHFICDARVLVKPYKEKGKVPDKYRKQ-QQGDFSGCTTPTGGLDARDPFDLHQLG 120
Query: 484 SKMFTQ-----ELMLRRKLEEQ---AELQQAIELQRRRLMNLQLPNLK 523
++M EL+LRRKLEEQ AELQ AIELQ RRLM LQL +LK
Sbjct: 121 ARMLQHSNSANELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLK 168
>gi|255587629|ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative [Ricinus communis]
Length = 578
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 273/568 (48%), Gaps = 110/568 (19%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++T +++NRI+ ++PEN SKI+GY+L+QD ER+++RLA P+ L+ +LI +AKS
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGL N + S P SPS N +P S + + S HP + + T + Y D
Sbjct: 61 LGL--NKPALSAPISPSQVNTSPVSDI--PLQFTPFSPASAHPISSPAASRRTASAYWD- 115
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDS-GGNSSGNDYMEELPFNDYL 179
+ VP++ G D+ + ++M+ L +D
Sbjct: 116 -----------------AQVTGDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQF 158
Query: 180 SFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRP 239
F S N DF+ SN+ G +RRS S + F L +
Sbjct: 159 EF--AHSVNSDFS------SNYFYSEPALGP--RTNRRSPSLPE---------FPL--KI 197
Query: 240 CLYFARGFCKNGESCKFVHG-----GFGD---------GGDVNGVIVGSPNKMDGFYLQQ 285
C YF++G+CK+G +C++VHG GF D + V GS K++
Sbjct: 198 CHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSNDEHVVSPGSLEKLE------ 251
Query: 286 HDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQ--QNDPQRAAAA------- 336
M + +R AS P + Y+K L + + QR A
Sbjct: 252 ----MELAELLKSRRGMPVSIAS--LPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKL 305
Query: 337 ------------------TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFP 378
+++L ++ K+ + ERND + + +RQIYLTFP
Sbjct: 306 LARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERND------PGGIVAGSRQIYLTFP 359
Query: 379 ADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSR 438
A+S F + DVS YFS FGPVQDVRIP QQKRMFGFVTF++ ETVK ILA+GNPH++C +R
Sbjct: 360 AESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGAR 419
Query: 439 VLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLE 498
VLVKPY+EK ++++++ F P + S D +LH + +LR++L
Sbjct: 420 VLVKPYREKSRLIDRK---FSEKLQHPMYNSSHFIDGDS-ELHPMPTISDNSRLLRKQLM 475
Query: 499 EQAELQQAIELQRRRLMNLQL-PNLKNH 525
E+ E A+E +RRRL+ L P NH
Sbjct: 476 EENE--HALEFERRRLLEFHLGPKSLNH 501
>gi|413924733|gb|AFW64665.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 697
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 154/246 (62%), Gaps = 38/246 (15%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGS 274
HRRSFS SDA E A +RPC+Y+ARG+CKNG SC+F+HG D
Sbjct: 137 HRRSFSLSDA----EAAA---SWRPCMYYARGYCKNGSSCRFLHGVPEDDA--------- 180
Query: 275 PNKMDGFYLQQHDEIMRMKAAA-----HQQRLAASQFASGVSPPLPYDKCMDFLLRQQND 329
++ +MR KA A QQ+L AS + SP +QQ++
Sbjct: 181 --------AEREMAVMRAKALAAAPPTQQQQLMASAYPFSPSPKGGVSLSFLLQQQQQSE 232
Query: 330 PQRAAAATLMLNDEFYKFG--QGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDED 387
QRAAA L+ ++ ++F R +R D + + A RQIYLTFPADSTF +ED
Sbjct: 233 TQRAAAGMLLGGEDMHRFPVRSPRMDRGDLIG-------SPAARQIYLTFPADSTFSEED 285
Query: 388 VSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEK 447
VSNYFS+FGPVQDVRIPYQQKRMFGFVTFVY ETVK IL++GNPHF+CD+RVLVKPYKEK
Sbjct: 286 VSNYFSMFGPVQDVRIPYQQKRMFGFVTFVYAETVKAILSKGNPHFVCDARVLVKPYKEK 345
Query: 448 GKIVEK 453
GK+ ++
Sbjct: 346 GKVPDR 351
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+R++++DPENASK+MG +LIQD +++L+RLA GPE L+ + + A+++
Sbjct: 1 MDAWEATKVVFDRVRALDPENASKMMGLLLIQDNSDKELIRLAFGPEHLLHSFVATARAE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPF 84
L++ S +P L + P+
Sbjct: 61 --LAAKPASPPSPVLGPLQSGAPW 82
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 16/87 (18%)
Query: 466 CSSPSGV-DSRDPYDLH---LGSKMF------TQELMLRRKLEEQ--AELQQAIELQRRR 513
C+SP+G+ DSRDPYDL +GS+M E LRRKLEE+ AELQQAIEL+ RR
Sbjct: 432 CASPTGLLDSRDPYDLQQPQIGSRMMYGNIANQHEAFLRRKLEEEQAAELQQAIELEGRR 491
Query: 514 LMNLQLPNLKNHSVHHHQRSLSMGSPI 540
M LQL +LK+ HHH L G+P+
Sbjct: 492 FMGLQLLDLKSRG-HHH---LGSGAPM 514
>gi|334186234|ref|NP_001190170.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646964|gb|AEE80485.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 406
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 147/227 (64%), Gaps = 32/227 (14%)
Query: 326 QQNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKD 385
QQ++ QRAAA LM+ D+ +K G R ER D A A+RQIYLTFPADS F++
Sbjct: 117 QQSEAQRAAA--LMMGDDLHKLGIWRPERIDLSATA-----CPASRQIYLTFPADSIFRE 169
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
EDVS+YFS FGPVQDVRIPYQQKRMFGFVTF+YPETVK ILA+GNPHF+C SRVLVKPYK
Sbjct: 170 EDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYK 229
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQ 505
EKGK+ +K + + SRD D LG + F ++L+ +R+ EE +
Sbjct: 230 EKGKVPDKYRTK---------------PSRDIMDFQLGGRAFHEDLLWKRRFEE-----R 269
Query: 506 AIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNV 552
A+ELQ RLMNLQL +++ + ++L + SP NQ V
Sbjct: 270 ALELQSTRLMNLQLLDVEKQFQLNFDQTL-----LVSPRLVSNNQRV 311
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+ +RI+++DP NASKI+G +L+QD E++++RLA GP+ L+ ++I +AK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|79316196|ref|NP_001030921.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|79456990|ref|NP_191904.2| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|46518429|gb|AAS99696.1| At3g63450 [Arabidopsis thaliana]
gi|332646962|gb|AEE80483.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332646963|gb|AEE80484.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 404
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 146/227 (64%), Gaps = 34/227 (14%)
Query: 326 QQNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKD 385
QQ++ QRAAA LM+ D+ +K G R ER D A A+RQIYLTFPADS F++
Sbjct: 117 QQSEAQRAAA--LMMGDDLHKLGIWRPERIDLSATA-----CPASRQIYLTFPADSIFRE 169
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
EDVS+YFS FGPVQDVRIPYQQKRMFGFVTF+YPETVK ILA+GNPHF+C SRVLVKPYK
Sbjct: 170 EDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYK 229
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQ 505
EKGK+ +K + SRD D LG + F ++L+ +R+ EE +
Sbjct: 230 EKGKVPDKTK-----------------PSRDIMDFQLGGRAFHEDLLWKRRFEE-----R 267
Query: 506 AIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNV 552
A+ELQ RLMNLQL +++ + ++L + SP NQ V
Sbjct: 268 ALELQSTRLMNLQLLDVEKQFQLNFDQTL-----LVSPRLVSNNQRV 309
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+ +RI+++DP NASKI+G +L+QD E++++RLA GP+ L+ ++I +AK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|326491203|dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 171/399 (42%), Positives = 221/399 (55%), Gaps = 80/399 (20%)
Query: 171 EELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTED 230
E+ PF E E F P ++ W +GG QHRRSFS SDA
Sbjct: 84 EDAPFPGVDHARYEGVGGEGFYAPE-EYGCWSP--ASGG----QHRRSFSLSDA---EAA 133
Query: 231 AGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIM 290
AG G++PC+Y+AR GF G + G P+ + ++ M
Sbjct: 134 AG---GWKPCMYYAR--------------GFCKNGSSCRFVHGLPDHVT-------EQDM 169
Query: 291 RMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQ-----NDPQRAAAATLMLNDEF- 344
+ AA + L S F S + ++FLL+QQ +D QRAAAA ML
Sbjct: 170 DVWTAATRSELMPSPFPFLPS-----PRGLNFLLQQQQQQQQSDSQRAAAAAAMLLGGGG 224
Query: 345 ------YKFG--QGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
+KF R +R LA A RQIYLTFPADSTF +EDVS+YFS +G
Sbjct: 225 GGGDDMHKFSVRSPRMDRGGDLAS------NPAARQIYLTFPADSTFSEEDVSSYFSYYG 278
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVE--KR 454
PVQDVRIPYQQKRMFGFVTFVY ETV+LILA+GNPHF+CD+RVLVKPYKEKGK+ + ++
Sbjct: 279 PVQDVRIPYQQKRMFGFVTFVYAETVRLILAKGNPHFVCDARVLVKPYKEKGKVPDRFRK 338
Query: 455 QQQFERGNMSPCSSPSG-VDSRDPYDL---HLGSKMF-----TQELMLRRK---LEEQAE 502
Q + G+ + C++P+G +DSRDP+DL +G +M + E LRRK ++ AE
Sbjct: 339 FQAPQHGDFAGCTTPTGLLDSRDPFDLQSPQIGPRMMFGNTGSHEAFLRRKLEEQQQAAE 398
Query: 503 LQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPIT 541
LQQAI+LQ RR M LQ +LK HHH +GSP+
Sbjct: 399 LQQAIDLQSRRFMGLQFLDLKRG--HHH-----LGSPVA 430
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 42/54 (77%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALI 54
MD ++AT ++F R++++ P+ ASKIMG +LIQD E D++RLA GPE L+Q ++
Sbjct: 1 MDAYEATKVVFARVQALHPDLASKIMGMLLIQDKSEEDMIRLAFGPEHLLQGVV 54
>gi|242069801|ref|XP_002450177.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
gi|241936020|gb|EES09165.1| hypothetical protein SORBIDRAFT_05g001540 [Sorghum bicolor]
Length = 612
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 150/216 (69%), Gaps = 27/216 (12%)
Query: 351 RAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRM 410
R +R D + + A RQIYLTFPADSTF +EDVSNYFS+FGPVQDVRIPYQQKRM
Sbjct: 236 RMDRGDLIG-------SPAARQIYLTFPADSTFSEEDVSNYFSMFGPVQDVRIPYQQKRM 288
Query: 411 FGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK-RQQQFER---GNMSPC 466
FGFVTFVY ETVK++L++GNPHF+CD+RVLVKPYKEKGK+ ++ R+ Q G + C
Sbjct: 289 FGFVTFVYAETVKVLLSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHAHHGVGEFAGC 348
Query: 467 SSPSG-VDSRDPYDL---HLGSKMF-----TQELMLRRK---LEEQAELQQAIELQRRRL 514
+SP+G +DSRDPYDL +G +M E LRRK ++ AELQQAIEL+ RR
Sbjct: 349 TSPTGLLDSRDPYDLQQPQIGPRMMYGNMANHEAFLRRKLEEQQQAAELQQAIELEGRRF 408
Query: 515 MNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQ 550
M LQL +LK+ HH L +GSP+ + + + Q
Sbjct: 409 MGLQLLDLKSRGHHH----LGLGSPVGAGSPMSLGQ 440
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F+R++ +DPENAS++MG +LIQD +++L+RLA GP+ L+ A + A+++
Sbjct: 1 MDAWEATKVVFDRVRELDPENASRMMGLLLIQDNSDKELIRLAFGPDHLLHAFVATARAE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFA 105
L + S +P L P+ L + A+++H PFA
Sbjct: 61 LAANGKPASPPSPVLGPLQTGPPWG-LPSPGAGADHHHHQHSPFA 104
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 6/45 (13%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHG 259
H RSFS SDA E A + +RPC+Y+ARG+CKNG SC+F+HG
Sbjct: 133 HCRSFSLSDA----EAAAAS--WRPCMYYARGYCKNGSSCRFLHG 171
>gi|297821268|ref|XP_002878517.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
gi|297324355|gb|EFH54776.1| hypothetical protein ARALYDRAFT_486853 [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 160/289 (55%), Gaps = 50/289 (17%)
Query: 327 QNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDE 386
Q ++ AA LM+ D+ +K G+ R ER D AM A+RQIYLTFPADS F++E
Sbjct: 123 QQSEAKSRAAALMMGDDLHKLGRWRPERIDLSAMA-----CPASRQIYLTFPADSIFREE 177
Query: 387 DVSNYFSI----FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVK 442
DVS+YFS+ FGPVQDVRIP+QQKRMFGFVTF+YP+TVK ILA+GNPHF+CDSRVLVK
Sbjct: 178 DVSDYFSMVVQYFGPVQDVRIPFQQKRMFGFVTFMYPDTVKSILAKGNPHFVCDSRVLVK 237
Query: 443 PYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF---TQELMLRRKLEE 499
PYKEKGK+ +K RD D LG + F TQ+L+ +R+ EE
Sbjct: 238 PYKEKGKVPDK--------------------YRDIMDFQLGGRAFHDNTQDLLWKRRFEE 277
Query: 500 QAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVD 559
+A+ELQ RLMNLQL ++K Q LS SP NQ V
Sbjct: 278 -----RALELQSTRLMNLQLLDVKK------QFQLSFDQTFVSPRLVSRNQRVC------ 320
Query: 560 NSTANNSSNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESS 608
+ N+ + E + VD+ EE + T GS SS
Sbjct: 321 -TKENDEVAIKLPESLEDDRLVDSPFASPTQHCLEFEECADTNGSRLSS 368
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++ +RI+S+DP NASKIMG +L+QD E++++RLA GP+ L+ ++I +AK
Sbjct: 1 MDVYEATRVVLSRIQSLDPANASKIMGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|356527124|ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 555
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 266/556 (47%), Gaps = 114/556 (20%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + T I+F+++ +PENA+KI+GY+L+QD E+D+++LAS P+ L++ + ++A+++
Sbjct: 1 MDISEYTRIVFDKLHRFEPENATKIIGYLLLQDHGEQDMVKLASLPDHLIRDVAYKARTE 60
Query: 61 LG-LSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLD 119
L L+S S P S N+ S L+ S P + ++P +T+
Sbjct: 61 LQRLASR--SAIQPISLPTNSQQCLSHLSVIS-----------PTSVITPGTLTSPA--S 105
Query: 120 FGKNSPLSNPKPS-----PFLSFENIRSGSCLVPSV----AKNDVGVVDSGGNSSGNDYM 170
F SP +P+ + F++ + S S L +N + ++SG NDY
Sbjct: 106 FQVQSPYWDPQSASNTNAEFMALGYVDSISELQKQTPLFSLENHMDTMNSGTAGIANDY- 164
Query: 171 EELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTED 230
+G D ++S + G ++
Sbjct: 165 ------------------------------YGLD---------------ASSASNLGGKN 179
Query: 231 AGFNLGYRPCLYFARGFCKNGESCKFVH-GGFGD------GGDV-NGVIVGSPNKMDGFY 282
F + C YF +GFCK+G SC++ H G D G D+ N V SP G
Sbjct: 180 GRFEFPVKTCHYFNKGFCKHGNSCRYYHEQGAPDMFSHMYGNDIFNDDQVISP----GSL 235
Query: 283 LQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPY----DKCMD---FLLRQQNDPQRAAA 335
Q EI+ + +L S S P+ Y K + +L Q + +
Sbjct: 236 AQLESEIVEL------LKLKKGGSISIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYS 289
Query: 336 ATLML---NDEFYKFGQGRAERNDFLAMGLAE--------KLTSANRQIYLTFPADSTFK 384
T +L + + + + LA + K SA+RQIYLTFPADSTF
Sbjct: 290 LTKLLARLKNSIRLIDRPHGQHSVVLAEDAPKFNGKVDYAKYISASRQIYLTFPADSTFS 349
Query: 385 DEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPY 444
+ DVSNYFS FG V+DVRIP Q++RMFGFVTF PETVK+IL +GNPH++C+SRVLVKPY
Sbjct: 350 EGDVSNYFSTFGKVEDVRIPSQERRMFGFVTFDDPETVKVILDKGNPHYVCESRVLVKPY 409
Query: 445 KEKGKIVEKRQQQFERGNMSPCSSPSGVD-SRDPYDLHLGSKMFTQELMLRRKLEEQAEL 503
KEK K++ ++ +R S SP VD +P + + + LRR+L Q E
Sbjct: 410 KEKPKLMLRKNS--DRIEHSAYYSPHYVDIDTEPTSIPRSCR---KPRFLRRQLINQQE- 463
Query: 504 QQAIELQRRRLMNLQL 519
+ A+E QR+R LQL
Sbjct: 464 EAALEFQRQRFAELQL 479
>gi|414882095|tpg|DAA59226.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 379
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 192/344 (55%), Gaps = 40/344 (11%)
Query: 360 MGLAEKLTS-ANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVY 418
M E ++S A RQIYLTFPADSTF +EDVSNYFS++GPVQDVRIPYQQKRMFGFVTFVY
Sbjct: 20 MDRGELMSSPAARQIYLTFPADSTFSEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVY 79
Query: 419 PETVKLILARGNPHFICDSRVLVKPYKEKGKIVE--KRQQQFERGNMSPCSSPSG-VDSR 475
ETVK+IL++GNPHF+CD+RVLVKPYKEKGK+ + ++ Q G+ + C+SP+G +DSR
Sbjct: 80 AETVKIILSKGNPHFVCDARVLVKPYKEKGKVPDRFRKLQHPHHGDFAGCTSPTGLLDSR 139
Query: 476 DPYDL---HLGSKMF-----TQELMLRRK---LEEQAELQQAIELQRRRLMNLQLPNLKN 524
DP+DL +G +M E LRRK ++ AELQQAIEL+ RR M L L +LK+
Sbjct: 140 DPFDLQQPQIGPRMMYGNVAGHEAFLRRKLEEQQQAAELQQAIELEGRRFMGLHLLDLKS 199
Query: 525 HSVHHHQRS--------LSMGSPITSPACADVNQNVIF-----PSFVDNSTANNSSNVTT 571
HH S L G A+ N N + + D T NS+++
Sbjct: 200 RGHHHLGSSPAAMATTTLGQGDDGCKGRSANGNDNAVAFHLEDANIQDTPTKMNSNSLAM 259
Query: 572 AA---------DQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILPCKFASMRKS 622
+ +E Q++ D N KEE KTE ++ I+ C F
Sbjct: 260 SGGPAAGAGGEHEEQQQDGDGDGSPKQAVNPGKEE--KTESGPVTATPIVACGFQE-SGV 316
Query: 623 AEGQTPDLPASSEVHGSTAISATSSVSESNADMPNITATDVVSY 666
E PD P +S ST + S + S+ P + ++ Y
Sbjct: 317 VEHILPDSPFASPSKASTQNGSIISNAASSLFPPPASTMELPPY 360
>gi|7573328|emb|CAB87798.1| putative protein [Arabidopsis thaliana]
Length = 399
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 143/227 (62%), Gaps = 39/227 (17%)
Query: 326 QQNDPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKD 385
QQ++ QRAAA LM+ D+ +K G R ER D A A+RQIYLTFPADS F++
Sbjct: 117 QQSEAQRAAA--LMMGDDLHKLGIWRPERIDLSATA-----CPASRQIYLTFPADSIFRE 169
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
EDVS+YFS FGPVQDVRIPYQQKRMFGFVTF+YPETVK ILA+GNPHF+C SRVLVKPYK
Sbjct: 170 EDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYK 229
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQ 505
EKGK+ +K + + SRD D L +L+ +R+ EE +
Sbjct: 230 EKGKVPDKYRTK---------------PSRDIMDFQL-------DLLWKRRFEE-----R 262
Query: 506 AIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNV 552
A+ELQ RLMNLQL +++ + ++L + SP NQ V
Sbjct: 263 ALELQSTRLMNLQLLDVEKQFQLNFDQTL-----LVSPRLVSNNQRV 304
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I+ +RI+++DP NASKI+G +L+QD E++++RLA GP+ L+ ++I +AK
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|414866610|tpg|DAA45167.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 292
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/141 (69%), Positives = 118/141 (83%), Gaps = 11/141 (7%)
Query: 393 SIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVE 452
SI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+ +
Sbjct: 4 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 63
Query: 453 KRQQQFERGNMSPCSSPS-GVDSRDPYDLH-LGSKMFTQ-----ELMLRRKLEEQ---AE 502
K ++Q ++G+ S C++P+ G+D+RDP+DLH LG++M EL+LRRKLEEQ AE
Sbjct: 64 KYRKQ-QQGDFSGCTTPTGGLDARDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQAAE 122
Query: 503 LQQAIELQRRRLMNLQLPNLK 523
LQ AIELQ RRLM LQL +LK
Sbjct: 123 LQHAIELQSRRLMGLQLLDLK 143
>gi|356569657|ref|XP_003553014.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 552
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 256/548 (46%), Gaps = 97/548 (17%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + T I+F++++ +PE+ +KI+GY+L+QD E+++++LAS P+ L++ + ++A+++
Sbjct: 1 MDISEYTRIVFDKLQRFEPEHTTKIIGYLLLQDHGEQEMVKLASLPDHLIRGVAYKARTE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
L + S P S +N+ C N+ + +SP V G
Sbjct: 61 LQRLAAR-SAIQPISLPINSQQ-------CLNH----------LSVISPTSVITPG---- 98
Query: 121 GKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFNDYLS 180
SP S SP+ P A N + ++M L
Sbjct: 99 TPTSPASFQVQSPYWD-----------PQSASN-----------TNAEFMA-------LG 129
Query: 181 FLDESSKNEDFTDPRSQFSNWGQDLNNG--GDVHLQHRRSFSASDACFGTEDAGFNLGYR 238
+LD S+ + T P N +N+G G + + S+ G F +
Sbjct: 130 YLDSISEFQKQT-PLFSLDNHMDTMNSGTAGIANDYYGLDASSVSNLGGKNGRRFEFPVK 188
Query: 239 PCLYFARGFCKNGESCKFVH-GGFGD------GGDV-NGVIVGSPNKMDGFYLQQHDEIM 290
C YF +GFCK+G SC++ H G D G D N V SP + Q EI+
Sbjct: 189 TCHYFNKGFCKHGNSCRYYHEHGVPDMFSHMYGNDTFNDDPVISPGSL----AQLESEIV 244
Query: 291 RMKAAAHQQRLAASQFASGVSPPLPY----DKCMD---FLLRQQNDPQRAAAATLML--- 340
+ +L S S P+ Y K + +L Q + + T +L
Sbjct: 245 EL------LKLKKGGSISIASLPMAYYERYKKVLQAEGYLTESQRHGKSGYSLTKLLARL 298
Query: 341 NDEFYKFGQGRAERNDFLAMGLAE--------KLTSANRQIYLTFPADSTFKDEDVSNYF 392
+ + + + LA + K SA+RQIYLTFPADSTF + DVS YF
Sbjct: 299 KNSIRLIDRPHGQHSVVLAEDAPKFNGKVDYGKYISASRQIYLTFPADSTFSEGDVSYYF 358
Query: 393 SIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVE 452
S FG V+DVRIP Q++RMFGFVT PETVK+IL +GNPH++C+SRVLVKPYKEK K +
Sbjct: 359 STFGKVEDVRIPSQERRMFGFVTLNDPETVKVILDKGNPHYVCESRVLVKPYKEKPKFMP 418
Query: 453 KRQQQFERGNMSPCSSPSGVD-SRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQR 511
++ +R S SP VD +P + + F LRR L E+ E + A E QR
Sbjct: 419 RKHS--DRIEHSAYYSPHYVDIDTEPTSI---PRSFRNPRFLRRLLIEKQE-EAAFEFQR 472
Query: 512 RRLMNLQL 519
RR LQ+
Sbjct: 473 RRFAELQM 480
>gi|168011119|ref|XP_001758251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690707|gb|EDQ77073.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 421
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 231/484 (47%), Gaps = 102/484 (21%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I++ R+++++PE SKIM ++L+Q+ ER++LR
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMLR------------------- 41
Query: 61 LGLSSNTF--STSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQ--MSPRVVTNNG 116
L L SN S L ++ S + ++ H FA V+T+ G
Sbjct: 42 LALGSNVLMQSVVKKAKKELGLDDSRSVMPPLQKRPAPLYIPDHEFASGGFGSNVLTSPG 101
Query: 117 YLDFGKNSPLSNPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELPFN 176
LD K + + N + + D +LP +
Sbjct: 102 LLDQVKLATIQQQH---------------------HNQLFLQD------------QLPLH 128
Query: 177 DYLSFLDESSKNED----FTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTE--- 229
D+LS L ++ ++ +TD + + LN+ ++ L R S S + +
Sbjct: 129 DHLSLLSDAVDQQNSLRVYTD--HYYPDTYAFLNSSKEI-LHSRSSSSRASPIVDSSSPP 185
Query: 230 DAGFNLGYRPCLYFARGFCKNGESCK--FVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHD 287
D G L ++PCLYFARG+CK+G SC+ G + +G+ GS +++ LQ
Sbjct: 186 DLGPTLAWKPCLYFARGYCKHGSSCRSPASSNGHRELRVDDGMAPGSLERLE-IELQ--- 241
Query: 288 EIMRMKAA---------AHQQRLAASQFASG-VSPPLPYDKC----MDFLLRQQN----- 328
E++R + A + +R + A G ++ + K L R +N
Sbjct: 242 ELLRGRRAPVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLI 301
Query: 329 DPQRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSAN---RQIYLTFPADSTFKD 385
D A ++ D ++F R++ E L+ N RQIYLTFPA+STF +
Sbjct: 302 DRPHGQHAVVLAEDA-HRFTVHRSDHR-------GEDLSGINPSSRQIYLTFPAESTFCE 353
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
EDV+++F +GPVQDVRIPYQQKRMFGFVTFVY ETVK IL+ GNPH+IC +RVLVKPY+
Sbjct: 354 EDVTSHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYR 413
Query: 446 EKGK 449
EKGK
Sbjct: 414 EKGK 417
>gi|218192754|gb|EEC75181.1| hypothetical protein OsI_11409 [Oryza sativa Indica Group]
Length = 221
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 115/141 (81%), Gaps = 13/141 (9%)
Query: 393 SIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVE 452
SI+GPV DVRIPYQQKRMFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+ +
Sbjct: 6 SIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD 65
Query: 453 KRQQQFERGNMSPCSSPSGVDSRDPYDLH-LGSKMF-----TQELMLRRK---LEEQAEL 503
K+ Q G+ S C++P+G+D RDP+DLH LG++M T E+MLRRK ++ AEL
Sbjct: 66 KKHQ----GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAEL 121
Query: 504 QQAIELQRRRLMNLQLPNLKN 524
QQAIEL RRLM+LQL +LKN
Sbjct: 122 QQAIELHSRRLMDLQLLDLKN 142
>gi|168037568|ref|XP_001771275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677364|gb|EDQ63835.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 143/239 (59%), Gaps = 34/239 (14%)
Query: 230 DAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEI 289
D G L ++PCLYFARG+CK+G SC+F+HG +G+ GS +++ LQ E+
Sbjct: 159 DLGPALAWKPCLYFARGYCKHGSSCRFLHGM------DDGMAPGSLERLE-IELQ---EL 208
Query: 290 MRMKAA---------AHQQRLAASQFASG-VSPPLPYDKC----MDFLLRQQN-----DP 330
+R + A + +R + A G ++ + K L R +N D
Sbjct: 209 LRGRRAPVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNTVTLIDR 268
Query: 331 QRAAAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSN 390
A ++ D ++F A R+D L+ + ++RQIYLTFPA+STF +EDV+
Sbjct: 269 PHGQHAVVLAEDA-HRF---TAYRSDHRGEDLS-GINPSSRQIYLTFPAESTFTEEDVTA 323
Query: 391 YFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGK 449
+F +GPVQDVRIPYQQKRMFGFVTFVY ETVK IL+ GNPH+IC +RVLVKPY+EKGK
Sbjct: 324 HFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREKGK 382
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 24/120 (20%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT I++ R+++++PE SKIM ++L+Q+ ER+++RLA G L+Q+++ +AK +
Sbjct: 1 MDSYEATRIVYGRVQALEPETGSKIMLHLLLQEHGEREMVRLALGSNVLIQSVVKKAKKE 60
Query: 61 LGL----------------------SSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNH 98
LGL +S +F ++ +SPSL++ S L++ + N+ H
Sbjct: 61 LGLEDNRDVMPLQHNAPLYIPDHDFASGSFGSNVLSSPSLHDQ--MSSLSDAFDRQNSLH 118
>gi|224055307|ref|XP_002298472.1| predicted protein [Populus trichocarpa]
gi|222845730|gb|EEE83277.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 143/243 (58%), Gaps = 39/243 (16%)
Query: 71 STPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDFGKNSPLSNPK 130
STP+S L NP +R N +N PF+Q SPRV N +LDFGK + L
Sbjct: 3 STPSS--LLPLNPIARPCNNTN----------PFSQSSPRVTNNGSFLDFGKKTRLRILG 50
Query: 131 P-SPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGN---DYMEELPFNDYLSFLD-ES 185
SPFLS +NIRSGS LVP ++N SGG N D+ E P +DYL FLD S
Sbjct: 51 LFSPFLSSDNIRSGSVLVPQFSRNG----GSGGGDCSNSSVDFPGEYPLDDYLLFLDGPS 106
Query: 186 SKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFAR 245
SKN+ F D + Q G + NG D HL HRR FS SD CFG ED GY+PCL FAR
Sbjct: 107 SKNKGFMDHKVQLG--GYPVANG-DSHL-HRRRFSESDVCFGAED-----GYKPCLNFAR 157
Query: 246 GFCKNGESCKFVHGGFG----DGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAA--HQQ 299
GFCKNGE CKFVHGG +GG GV+VGSP +M+ YLQQ +E+ MKAA QQ
Sbjct: 158 GFCKNGEGCKFVHGGENIVEVNGG---GVLVGSPREMEEHYLQQQEEMTIMKAAQQHQQQ 214
Query: 300 RLA 302
RLA
Sbjct: 215 RLA 217
>gi|357494859|ref|XP_003617718.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355519053|gb|AET00677.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 547
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 156/302 (51%), Gaps = 34/302 (11%)
Query: 240 CLYFARGFCKNGESCKFVHGGFGD------GGDVNGVIVGSPNKMDGFYLQQHDEIMRMK 293
C YF++G+C++G +C++ HG G+ + P G Q EI+ +
Sbjct: 186 CHYFSKGYCRHGGNCRYFHGQVPHESFSHMHGNNDNTSNEDPVISPGSLAQIESEIIEL- 244
Query: 294 AAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQ--QNDPQRAAAATLMLNDEFYKFGQGR 351
Q+R AS P YDK L + QR + L + R
Sbjct: 245 --LKQRRGNPMSIAS--LPMAYYDKYKKVLQAHGYLTESQRHGKSGYSLTKLLARLNSIR 300
Query: 352 --------------AERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGP 397
+ ++ G + + SA+RQIYLTFPADSTF +EDV+ YF+ FG
Sbjct: 301 LIDRPHGQHAVVLAEDAPKYIQKGDSVQNISASRQIYLTFPADSTFTEEDVAEYFNAFGY 360
Query: 398 VQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQ 457
V+DVRIP QQKRMFGFVTF PETV++IL +GNPH++ SRVLVKPY+EK K+VE+ +
Sbjct: 361 VEDVRIPCQQKRMFGFVTFADPETVRMILDKGNPHYVRGSRVLVKPYREKTKVVERIESW 420
Query: 458 FERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQRRRLMNL 517
F G+ P S + + R L+ + + L R+L E+ E QA ELQRRRL L
Sbjct: 421 FV-GSYDPTSHGTSIVLR----LYSVPRSYGNHRSLSRQLMEEQE--QAFELQRRRLAQL 473
Query: 518 QL 519
Q
Sbjct: 474 QF 475
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + T I+F++I+ +PENA KI+GY+L+QD E+++ RLAS P+ ++ ++F+A
Sbjct: 1 MDISEYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKALQM 60
Query: 61 LGLSSNTFSTSTP 73
L ++S P
Sbjct: 61 LAVNSTMMPIPPP 73
>gi|224129150|ref|XP_002320513.1| predicted protein [Populus trichocarpa]
gi|222861286|gb|EEE98828.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 14/196 (7%)
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
+++L ++ K+ + ERND + + +RQIYLTFPA+STF ++DVSNYFS FG
Sbjct: 298 SVILTEDVPKYLEYAGERND------PGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFG 351
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQ 456
PVQDVRIP QQKRMFGFVTFV+ ETVK IL++GNPH +C +RVLVKPY+EK ++V+++
Sbjct: 352 PVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLVDRKYA 411
Query: 457 QFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQRRRLMN 516
E+ S +D +LH ++ +LR++L E+ E QA+EL+RRRL
Sbjct: 412 --EKIQHPFFYSQHFIDGDS--ELHSVPRVCDNSRLLRKQLMEEHE--QALELERRRLSE 465
Query: 517 LQLP--NLKNHSVHHH 530
QL L H+ H H
Sbjct: 466 FQLAPKPLARHAYHGH 481
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 11/122 (9%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++T +++NRI+ I+PE KI+GYIL+Q+ ER+++RLA P+ L+ A I +AKS
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFS--RLNNCSNNANNNHVSRHPFAQMSP-RVVTNNGY 117
LGL N P SPS N P S L N A VS HP + SP ++ T +
Sbjct: 61 LGL--NKTPVPNPISPSQVNPAPVSDVHLQFIPNTA----VSSHPIS--SPIKIRTAGSF 112
Query: 118 LD 119
D
Sbjct: 113 WD 114
>gi|357459965|ref|XP_003600264.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355489312|gb|AES70515.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 539
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 160/312 (51%), Gaps = 48/312 (15%)
Query: 237 YRPCLYFARGFCKNGESCKFVHGG----------FGDGGDVNGVIVGSPNKMDGFYLQQH 286
++ C YF++G+C++G SC+F H G +G+ N SP G Q
Sbjct: 171 FKTCHYFSKGYCRHGNSCRFYHHGQAVSDIVSHMYGNDAAANDEQAISP----GSLAQLE 226
Query: 287 DEIMRMKAAAHQQRLAASQFASGVSPPLPYDK------CMDFLLRQQNDPQRAAAAT--- 337
EI+ + +QR AS P YDK +L Q + T
Sbjct: 227 SEIVDLL----KQRGNPISIAS--LPMAYYDKYKKVLQAEGYLAESQRHGKSGYNLTKLL 280
Query: 338 LMLNDEFYKFGQGRAERNDFLA------MGLAE-KLTSANRQIYLTFPADSTFKDEDVSN 390
+ L + + + LA MG A+ + SA++QIYLTFPADSTF +EDVSN
Sbjct: 281 IRLRNSIRLIDRPHGQHAVVLAEDAPKFMGKADCQNISASQQIYLTFPADSTFSEEDVSN 340
Query: 391 YFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKI 450
YF FG V+DVRIP QQ+RMFGFVTFV PETVK+IL +GNPH++ SRVLVKPYKEK K+
Sbjct: 341 YFGTFGSVEDVRIPCQQRRMFGFVTFVEPETVKMILDKGNPHYVRGSRVLVKPYKEKPKL 400
Query: 451 VEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFT---QELMLRRKLEEQAELQQAI 507
++++ R C SP D D + S + + R LEEQ +
Sbjct: 401 IDRKYPY--RVEHHVCYSPRYAD----IDAEIASSPRSCGNPRYLTRLLLEEQDRI---F 451
Query: 508 ELQRRRLMNLQL 519
ELQRRRL LQ+
Sbjct: 452 ELQRRRLALLQI 463
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + T I+ ++I+ +PE+A+KI+GY+L+QD E+++ +LAS P+ L++ + +A+++
Sbjct: 11 MDISECTRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTE 70
Query: 61 L-GLSSNTFSTSTPTSP-SLNNNNPFSRLNNCS 91
L +++ + +S +SP S ++P+ N S
Sbjct: 71 LQKMATRSVISSGNSSPASFQVHSPYYNHGNTS 103
>gi|356552675|ref|XP_003544688.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 547
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 43/306 (14%)
Query: 240 CLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQ 299
C YF +GFCK+G SC+F HG V+ + ++M G D+++ + A +
Sbjct: 182 CHYFNKGFCKHGTSCRFYHGQ---------VVPENFSQMYGNDAISEDQVISPGSLAQLE 232
Query: 300 -------RLAASQFASGVSPPLPYDKCMD------FLLRQQNDPQRAAAATLML---NDE 343
R + P YDK +L Q + + T +L N+
Sbjct: 233 SEIIELLRTKGGPMSIASLPMAYYDKYKKVLQADGYLTESQRHGKSGYSLTKLLARLNNS 292
Query: 344 FYKFGQGRAERNDFLAMGLAEKL--------TSANRQIYLTFPADSTFKDEDVSNYFSIF 395
G+ + + LA ++ SA+RQIYLTFPADSTF ++DVSNYF+ F
Sbjct: 293 IRLIGRPHGQHSVVLAEDAPTQMQKGDFARNISASRQIYLTFPADSTFTEDDVSNYFNTF 352
Query: 396 GPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQ 455
GPV DVRIP QQ+RMFGFVTFV+ ETVK +L +GNPH + SRVLVKPY+EK K+ E++
Sbjct: 353 GPVADVRIPNQQRRMFGFVTFVHSETVKTVLDKGNPHCVRGSRVLVKPYQEKAKVNERKY 412
Query: 456 QQFERGNMSPCSSPSGVDSRDPYDLHLGS--KMFTQELMLRRKLE--EQAELQQAIELQR 511
+R C SP VD D L S + F +RR+L+ E+ E +++EL++
Sbjct: 413 T--DRIEHPVCYSPHYVD----IDTELNSIPRSFGNHRSIRRQLQLIEEEEQGRSLELKK 466
Query: 512 RRLMNL 517
R L L
Sbjct: 467 RSLAQL 472
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 21/99 (21%)
Query: 7 TSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQL----- 61
TSI+F++I+ +PENA KI+GY+ Q E+++ +LAS P+ ++ + +A+ +L
Sbjct: 6 TSIVFDKIQKFEPENARKIIGYLFFQGHGEQEMAKLASCPDYFIREVAVQARKELQRLAA 65
Query: 62 ---------------GLSS-NTFSTSTPTSPSLNNNNPF 84
GLS + S TPTSP+ P+
Sbjct: 66 KPDMLAMSLTVNPQHGLSDLSVISPRTPTSPNFQVPPPY 104
>gi|225460759|ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera]
gi|297737542|emb|CBI26743.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 149/247 (60%), Gaps = 17/247 (6%)
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
+++L ++ K+ + R+ER+D + S +RQIYLTFPA+STF +EDVS+YFS FG
Sbjct: 286 SVILAEDVPKYMESRSERSD------PGPIVSGSRQIYLTFPAESTFTEEDVSDYFSTFG 339
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQ- 455
V+DVRIP QQKRMFGFVTF +TVK ILA+G+PH++C +RVLVKPY+EK + +++
Sbjct: 340 LVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYL 399
Query: 456 QQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQRRRLM 515
++FE P + +DS +LH+ + +LR+++ E+ E Q +E + RRL
Sbjct: 400 EKFESSMYYPLQY-ADMDS----ELHMMPRGMETSRLLRKQIMEEQEFAQDLEFETRRLS 454
Query: 516 NLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTANNSSNVTTAADQ 575
LQL + HH SL + + A + FP+ V ++ + SN + +D
Sbjct: 455 KLQLARNPLANQLHHGYSLDELKVLEAHA-----NHSKFPTVVHSNYPLDVSNNGSTSDD 509
Query: 576 EPQKEVD 582
+P + V+
Sbjct: 510 KPWRAVN 516
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 47/63 (74%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++T+++FNRI+ ++PEN SKI+GY+L++ + +++RLA GP+ ++ +I K +
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>gi|296084999|emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 122/185 (65%), Gaps = 18/185 (9%)
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
+++L ++ K+ + ER+D A + +++QIYLTFPADSTF ++DVSNYF+ FG
Sbjct: 273 SVILAEDLPKYMEVNGERSDPGA------IVGSSKQIYLTFPADSTFTEQDVSNYFNKFG 326
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG--KIVEKR 454
PVQDVRIP QQKRMFGFVTFV+ ETVK IL +GNPH+IC +RVLVKPY+EK + V++R
Sbjct: 327 PVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR 386
Query: 455 QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQRRRL 514
Q SP +D +L ++ +LR++ + E +QA+EL+RRRL
Sbjct: 387 QHPM-------YYSPHFIDEDS--ELQSIPRVCDNSRLLRKQ-QLMEEHEQALELERRRL 436
Query: 515 MNLQL 519
LQL
Sbjct: 437 SELQL 441
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++T +++NRI+ ++PEN SKI+GY+L+QD ERD++R A + +Q LI +AK++
Sbjct: 14 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 73
Query: 61 LGLSSNTFSTSTPTSPSLNNNNP 83
LGLSS + S+P SP N +P
Sbjct: 74 LGLSSKP-AVSSPISPPQVNPSP 95
>gi|225447594|ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 122/185 (65%), Gaps = 18/185 (9%)
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
+++L ++ K+ + ER+D A + +++QIYLTFPADSTF ++DVSNYF+ FG
Sbjct: 320 SVILAEDLPKYMEVNGERSDPGA------IVGSSKQIYLTFPADSTFTEQDVSNYFNKFG 373
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKG--KIVEKR 454
PVQDVRIP QQKRMFGFVTFV+ ETVK IL +GNPH+IC +RVLVKPY+EK + V++R
Sbjct: 374 PVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR 433
Query: 455 QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQRRRL 514
Q SP +D +L ++ +LR++ + E +QA+EL+RRRL
Sbjct: 434 QHPM-------YYSPHFIDEDS--ELQSIPRVCDNSRLLRKQ-QLMEEHEQALELERRRL 483
Query: 515 MNLQL 519
LQL
Sbjct: 484 SELQL 488
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 117/264 (44%), Gaps = 56/264 (21%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++T +++NRI+ ++PEN SKI+GY+L+QD ERD++R A + +Q LI +AK++
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGYLDF 120
LGLSS + S+P SP N +P S L L F
Sbjct: 61 LGLSSKP-AVSSPISPPQVNPSPVSDLP-----------------------------LQF 90
Query: 121 GKNSPLS-NPKPSPFLSFENIRSGSCLVPSVAKNDVGVVDSGGNSSGNDYMEELP----F 175
SP S P PSP R G+ D V G+ Y + LP
Sbjct: 91 TPFSPASARPFPSP-------RPGNSYWDPQVNGDQQQVHKLGDFVPQGYSDSLPDDFRL 143
Query: 176 NDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNL 235
+ FL + E+ S+FS + + RRS S + F L
Sbjct: 144 QSQIHFLAMEDQLENSVG--SEFSGSYYYAEQALNTRIS-RRSPSLPE---------FPL 191
Query: 236 GYRPCLYFARGFCKNGESCKFVHG 259
+ C YF +GFCK+G SC++ HG
Sbjct: 192 --KVCHYFNKGFCKHGNSCRYFHG 213
>gi|147832355|emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]
Length = 556
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 153/268 (57%), Gaps = 34/268 (12%)
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
+++L ++ K+ + R+ER+D + S +RQIYLTFPA+STF +EDVS+YFS FG
Sbjct: 286 SVILAEDVPKYMESRSERSD------PGPIVSGSRQIYLTFPAESTFTEEDVSDYFSTFG 339
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR-Q 455
V+DVRIP QQKRMFGFVTF +TVK ILA+G+PH++C +RVLVKPY+EK + +++
Sbjct: 340 LVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYS 399
Query: 456 QQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQRRRLM 515
++FE P + +DS +LH+ + +LR+++ E+ E Q +E + RRL
Sbjct: 400 EKFESSMYYPLQY-ADMDS----ELHMMPRGMETSRLLRKQIMEEQEFAQDLEFETRRLS 454
Query: 516 NLQLPNLKNHSVHHHQRSL----------------SMGSPIT-----SPACADVNQNVIF 554
LQL + HH SL S+ S +T A N + F
Sbjct: 455 KLQLARNPLANQLHHGYSLDELKVLEAIIPSFWNCSLSSDLTLFLGLVQTIAHANHSK-F 513
Query: 555 PSFVDNSTANNSSNVTTAADQEPQKEVD 582
P+ V ++ + SN + +D +P + V+
Sbjct: 514 PTVVHSNYPLDVSNNGSTSDDKPWRAVN 541
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 47/63 (74%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++T+++FNRI+ ++PEN SKI+GY+L++ + +++RLA GP+ ++ +I K +
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>gi|77552901|gb|ABA95697.1| RNA recognition motif, putative, expressed [Oryza sativa Japonica
Group]
Length = 480
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 114/178 (64%), Gaps = 20/178 (11%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
RQIYLTFP DS F EDV NYFS++G VQDVRIPYQ+K MFGFVTF Y +TVKLILA+GN
Sbjct: 167 RQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLILAKGN 226
Query: 431 PHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRD-PYDLH--LGSKMF 487
PH+ICD+RVLVKPYKEK K+ K + +++ C P + + P++ + LG ++
Sbjct: 227 PHYICDARVLVKPYKEKDKVPNKFR------HVNHCLIPLRIFAHILPFECYIVLGPRIL 280
Query: 488 -----TQELMLRRKLEEQAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPI 540
+ E R K +EQ Q A ELQR LM L L NL++ H S MGS +
Sbjct: 281 YRDIASHEASFRMKQDEQ---QHATELQRCCLMRLPLLNLQDWG---HHLSSPMGSHV 332
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 43/61 (70%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M ++AT ++F R+++++P A I+G +L +D E D++RLA GP+ L+Q++I + ++
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|255576322|ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein, putative [Ricinus communis]
Length = 551
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 132/244 (54%), Gaps = 47/244 (19%)
Query: 240 CLYFARGFCKNGESCKFVHGGFGDG-----GDVNGVIVGSPNKMDGFYLQQHDEIMRMKA 294
C YF +G+CK+G +C++ HG D +N + SP ++ L EI+ +
Sbjct: 194 CHYFNKGYCKHGSNCRYFHGQISDSFPRTFDAINEDQIFSPGSLEKLEL----EIIELLK 249
Query: 295 AAHQQRLAASQFASGVSPPLPYDK------CMDFLLRQQNDPQRAAAAT----------- 337
+ ++ + P L Y+K +L Q + + T
Sbjct: 250 SRKGNPVSIASL-----PMLYYEKYGKVLQADGYLTESQRHGKAGYSLTKLLARLKNSIR 304
Query: 338 ----------LMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDED 387
++L ++ K+ + R +RND + S +RQIYLTFPA+STF ++D
Sbjct: 305 LIDRPHGQHAVILAEDVPKYMENRGDRND------PGPIVSGSRQIYLTFPAESTFTEDD 358
Query: 388 VSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEK 447
VSNYF+ FGPV+DVRIP QQKRMFGFVTF +TVK+ILA+GNPHF+C++RVLVKPY+E
Sbjct: 359 VSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILAKGNPHFVCNARVLVKPYREN 418
Query: 448 GKIV 451
++
Sbjct: 419 QSLL 422
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + T ++FN+IK I+PEN +KI+GY+L+QD +++++ LA P+ ++Q +I++AK++
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60
Query: 61 LGLSSNTFSTSTPTSPSLNN 80
L + S +TP SPS+N+
Sbjct: 61 LNQLALK-SAATPLSPSMNS 79
>gi|295913262|gb|ADG57888.1| transcription factor [Lycoris longituba]
Length = 180
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 111/174 (63%), Gaps = 27/174 (15%)
Query: 235 LGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKA 294
G++PCL++ RGFCKNG +C+F+HG D I S ++Q +MR K+
Sbjct: 32 FGWKPCLHYQRGFCKNGSACRFLHGPVDD-------ISAS--------VEQELMLMRSKS 76
Query: 295 AAHQQRLAASQFASGVSPP-LPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKF-GQGRA 352
QRLAAS A SP +KC F+L QQN+ QRAAA LML E KF G+ R
Sbjct: 77 ----QRLAASAAAFPYSPTGSSSNKCFKFML-QQNESQRAAAVALMLESENQKFMGRARL 131
Query: 353 ERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ 406
ER+DF + + ++RQIYLTFPADSTF++EDVSNYFSI+GPVQDVRIPYQ
Sbjct: 132 ERSDFAGI-----VNPSSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQ 180
>gi|302796663|ref|XP_002980093.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
gi|300152320|gb|EFJ18963.1| hypothetical protein SELMODRAFT_112009 [Selaginella moellendorffii]
Length = 394
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 91/117 (77%), Gaps = 6/117 (5%)
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
++L ++ +F RA+R+D + + ++RQIYLTFPA+STF ++DVS +F +G
Sbjct: 284 AVVLAEDAQRFVGYRADRDDL------KDVNPSSRQIYLTFPAESTFTEDDVSAHFRSYG 337
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
PVQDVRIPYQQKRMFGFVTF+YPETVK IL+ GNPH+IC +RVLVKPY+EK K+ E+
Sbjct: 338 PVQDVRIPYQQKRMFGFVTFIYPETVKAILSEGNPHYICGARVLVKPYREKAKLGER 394
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F R+++ DPEN SKI+G +L+QD E+++ RLA G + L+Q+ I +A+ +
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>gi|302767304|ref|XP_002967072.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
gi|300165063|gb|EFJ31671.1| hypothetical protein SELMODRAFT_439924 [Selaginella moellendorffii]
Length = 502
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 125/229 (54%), Gaps = 49/229 (21%)
Query: 236 GYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAA 295
++PC+Y++RG CK+G C+F+H +PN + +++H ++A
Sbjct: 203 AWKPCVYYSRGHCKHGSGCRFLH---------------TPNSLG---IEEHG----TESA 240
Query: 296 AHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERN 355
+ L + LLR + P + M +EF +
Sbjct: 241 LERLELEIQE-----------------LLRARKSPVPISLLPQMYFEEFGSALHVDGKPI 283
Query: 356 DFLAMGLAEKLTSA-----NRQ-----IYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPY 405
D L+ +LTS+ N Q IYLTFPA+S F +EDV+ +FS +GPVQDVRIPY
Sbjct: 284 DLLSSPSCMRLTSSSLLRPNGQQAVVLIYLTFPAESAFTEEDVNAHFSAYGPVQDVRIPY 343
Query: 406 QQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR 454
QQKRMFGFVTF++ ETVK ILA GNPH++C +RVLVKPY++K K +K+
Sbjct: 344 QQKRMFGFVTFIHAETVKTILAEGNPHYVCGARVLVKPYRDKVKYTDKK 392
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++ T +L+ R++++DP + SKI+GY+L+QD E+D+LR+A G + L+ +++ +AK +
Sbjct: 1 MDPYELTRMLYARVQALDPRHVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LGLS 64
LGLS
Sbjct: 61 LGLS 64
>gi|224068839|ref|XP_002302838.1| predicted protein [Populus trichocarpa]
gi|222844564|gb|EEE82111.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 128/234 (54%), Gaps = 33/234 (14%)
Query: 240 CLYFARGFCKNGESC----------KFV--HGGFGDGGDVNGVIV----GSPNKMDGFYL 283
C YF +GFCK+G +C +FV G F ++ G P + +
Sbjct: 171 CHYFIKGFCKHGNNCSSNLNEIANEEFVVSPGSFEKLELELTELLKSRRGVPVSIASLPM 230
Query: 284 QQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRA----AAATLM 339
++ R A + +G S L R +N + +++
Sbjct: 231 MYYEMYGRTLQAEGYLTESQRHGKAGYS-------LTKLLARLKNSIRLIDRPHGQHSVI 283
Query: 340 LNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQ 399
L ++F K+ + ERND + + +RQIYLTFPA+STF ++DVSNYFS FGPVQ
Sbjct: 284 LAEDFPKYLEYAGERND------PGGIVAGSRQIYLTFPAESTFTEQDVSNYFSNFGPVQ 337
Query: 400 DVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
DVRIP QQKRMFGFVTFV+ ETVK ILA+GNPH IC +RVLVKPY+EK +++++
Sbjct: 338 DVRIPCQQKRMFGFVTFVFAETVKKILAKGNPHHICGARVLVKPYREKSRLIDR 391
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++T +++NRI++I+PE KI+GYILIQ+ ER+++RLA P+ L+ A+I +AKS
Sbjct: 1 MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60
Query: 61 LGLSSNTFSTSTPTSPSLNNNNPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNNGY 117
LGL N SPS N +P S + N+ VS HP SP V GY
Sbjct: 61 LGL--NKIPVLNLISPSQVNPSPVSDVPQ--QFIPNSTVSSHPI--FSPVKVRTAGY 111
>gi|302822034|ref|XP_002992677.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
gi|300139523|gb|EFJ06262.1| hypothetical protein SELMODRAFT_236569 [Selaginella moellendorffii]
Length = 361
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 91/117 (77%), Gaps = 6/117 (5%)
Query: 337 TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
++L ++ +F RA+R+D + + ++RQIYLTFPA+STF ++DVS +F +G
Sbjct: 251 AVVLAEDAQRFVGYRADRDDL------KDVNPSSRQIYLTFPAESTFTEDDVSAHFRSYG 304
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
PVQDVRIPYQQKRMFGFVTF+YPETVK IL+ GNPH+IC +RVLVKPY+EK K+ E+
Sbjct: 305 PVQDVRIPYQQKRMFGFVTFIYPETVKAILSEGNPHYICGARVLVKPYREKAKLGER 361
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++AT ++F R+++ DPEN SKI+G +L+QD E+++ RLA G + L+Q+ I +A+ +
Sbjct: 1 MDAYEATQLVFARVQAQDPENVSKIIGLMLLQDRSEQEMARLALGSDALLQSAIAKARRE 60
Query: 61 LGL 63
LGL
Sbjct: 61 LGL 63
>gi|77548504|gb|ABA91301.1| RNA recognition motif, putative [Oryza sativa Japonica Group]
Length = 401
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 87/116 (75%), Gaps = 14/116 (12%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
RQIYLTFP DS F EDV NYFS++G VQDVRIPYQ+KRMFGFVTF Y +TVKLILA+GN
Sbjct: 167 RQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFAYQKTVKLILAKGN 226
Query: 431 PHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVD------SRDPYDL 480
PH+ICD+RVLVKPYKEK K+ K+ QQ + SPS ++ SR P+DL
Sbjct: 227 PHYICDARVLVKPYKEKDKVPNKKFQQSD--------SPSYMNHNRLLYSRVPFDL 274
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 42/61 (68%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M ++AT ++F R+++++P A I+G +L +D E D++ LA GP+ L+Q++I + ++
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|222615430|gb|EEE51562.1| hypothetical protein OsJ_32780 [Oryza sativa Japonica Group]
Length = 400
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 87/116 (75%), Gaps = 14/116 (12%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
RQIYLTFP DS F EDV NYFS++G VQDVRIPYQ+KRMFGFVTF Y +TVKLILA+GN
Sbjct: 167 RQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFAYQKTVKLILAKGN 226
Query: 431 PHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVD------SRDPYDL 480
PH+ICD+RVLVKPYKEK K+ K+ QQ + SPS ++ SR P+DL
Sbjct: 227 PHYICDARVLVKPYKEKDKVPNKKFQQSD--------SPSYMNHNRLLYSRVPFDL 274
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 42/61 (68%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M ++AT ++F R+++++P A I+G +L +D E D++ LA GP+ L+Q++I + ++
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDKNEMDMIHLACGPDNLLQSIIAKVRTD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|356499429|ref|XP_003518543.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 541
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 140/283 (49%), Gaps = 49/283 (17%)
Query: 226 FGTEDAGFNLGYRP--------CLYFARGFCKNGESCKFVHGGF----------GDGGDV 267
+G + + NLG R C YF +GFCK+G SC+F HG D
Sbjct: 157 YGLDASAANLGGRRFSEFPMKMCHYFNKGFCKHGTSCRFYHGQVVPENFSQMHANDAIGE 216
Query: 268 NGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMD------ 321
+ VI SP G Q EI+ + R + P YDK
Sbjct: 217 DQVI--SP----GSLAQLESEIIEL------LRAKGGPMSIASLPMAYYDKYKKVLQADG 264
Query: 322 FLLRQQNDPQRAAAATLML---NDEFYKFGQGRAERNDFLA--------MGLAEKLTSAN 370
+L Q + + T +L + G+ + + LA G + SA+
Sbjct: 265 YLTESQRHGKSGYSLTKLLARLKNSIQLIGRPHGQHSVVLAEDSPTQMQKGDFARNISAS 324
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
QIYLTFPADSTF ++DVSNYF+ FGPV DVRIP QQ+RMFGFVTFV+ ETVK +L +GN
Sbjct: 325 YQIYLTFPADSTFTEDDVSNYFNTFGPVADVRIPNQQRRMFGFVTFVHSETVKSVLDKGN 384
Query: 431 PHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVD 473
PH + SRVLVKPY+EK K+ E++ +R C SP VD
Sbjct: 385 PHCVRGSRVLVKPYREKAKVNERKYT--DRIEHPICYSPHYVD 425
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 7 TSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQL----- 61
T I+F +I+ +PE+A KI+GY+ Q E+++ +LAS P+ + ++ +AK +L
Sbjct: 6 TRIVFEKIQKFEPEHARKIIGYLFFQGHGEQEMAKLASCPDYFICEVVVQAKKELQRLAA 65
Query: 62 ---------------GLSS-NTFSTSTPTSPSLNNNNPFSRLNNCSN 92
GLS + S TPTSP+ P+ + +N
Sbjct: 66 KPDMLPISRTVNPQQGLSDLSVISPRTPTSPNFQMPPPYWDPQSAAN 112
>gi|115474605|ref|NP_001060899.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|42407705|dbj|BAD08853.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622868|dbj|BAF22813.1| Os08g0126700 [Oryza sativa Japonica Group]
gi|125602052|gb|EAZ41377.1| hypothetical protein OsJ_25894 [Oryza sativa Japonica Group]
gi|215767202|dbj|BAG99430.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 604
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 54/312 (17%)
Query: 238 RPCLYFARGFCKNGESCKFVH--------GGFGDGGDV-----NGVIVGSPNKMDGFYLQ 284
RPC YF++G CKNG++C + H G GDV GV GS ++
Sbjct: 215 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLE----M 270
Query: 285 QHDEIMRMK-----AAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLM 339
+ E++ + + A L ++ G+ + +L Q + + T +
Sbjct: 271 EITELLNSRRGQPVSIASLPTLYGEKYGKGL-------QADGYLTESQRHGKAGYSLTRL 323
Query: 340 LN--DEFYKFGQGRAERNDFLAMGLAEKL----------------TSANRQIYLTFPADS 381
L+ ++ + + + LA A+ + +++ QIYLTFPA+S
Sbjct: 324 LSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAES 383
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
TF ++DV+NYF +GPV+DVRIP Q++RMFGFV+F PETV IL R NPHFIC SRVLV
Sbjct: 384 TFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLV 443
Query: 442 KPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQA 501
KPY+EK K V++ + +M P P + +D L + + ++R++L E+
Sbjct: 444 KPYREKSKCVDRTCVDNIK-SMVPYCPPRFFE----FDQELYTAEYDASRLMRKQLAEKR 498
Query: 502 ELQQAIELQRRR 513
E+ +E++RRR
Sbjct: 499 EM--LLEMERRR 508
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M+ + + F R++ ++PE+ KI G +L+++ E +L++LA GPE + A I K+
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|125560003|gb|EAZ05451.1| hypothetical protein OsI_27665 [Oryza sativa Indica Group]
Length = 607
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 54/312 (17%)
Query: 238 RPCLYFARGFCKNGESCKFVH--------GGFGDGGDV-----NGVIVGSPNKMDGFYLQ 284
RPC YF++G CKNG++C + H G GDV GV GS ++
Sbjct: 218 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLE----M 273
Query: 285 QHDEIMRMK-----AAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLM 339
+ E++ + + A L ++ G+ + +L Q + + T +
Sbjct: 274 EITELLNSRRGQPVSIASLPTLYGEKYGKGL-------QADGYLTESQRHGKAGYSLTRL 326
Query: 340 LN--DEFYKFGQGRAERNDFLAMGLAEKL----------------TSANRQIYLTFPADS 381
L+ ++ + + + LA A+ + +++ QIYLTFPA+S
Sbjct: 327 LSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAES 386
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
TF ++DV+NYF +GPV+DVRIP Q++RMFGFV+F PETV IL R NPHFIC SRVLV
Sbjct: 387 TFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLV 446
Query: 442 KPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQA 501
KPY+EK K V++ + +M P P + +D L + + ++R++L E+
Sbjct: 447 KPYREKSKCVDRTCVDNIK-SMVPYCPPRFFE----FDQELYTAEYDASRLMRKQLAEKR 501
Query: 502 ELQQAIELQRRR 513
E+ +E++RRR
Sbjct: 502 EM--LLEMERRR 511
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M+ + + F R++ ++PE+ KI G +L+++ E +L++LA GPE + A I K+
Sbjct: 1 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|205688239|sp|Q6ZK57.2|C3H54_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 54;
Short=OsC3H54
Length = 653
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 158/312 (50%), Gaps = 54/312 (17%)
Query: 238 RPCLYFARGFCKNGESCKFVH--------GGFGDGGDV-----NGVIVGSPNKMDGFYLQ 284
RPC YF++G CKNG++C + H G GDV GV GS ++
Sbjct: 264 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLE----M 319
Query: 285 QHDEIMRMK-----AAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLM 339
+ E++ + + A L ++ G+ + +L Q + + T +
Sbjct: 320 EITELLNSRRGQPVSIASLPTLYGEKYGKGL-------QADGYLTESQRHGKAGYSLTRL 372
Query: 340 LN--DEFYKFGQGRAERNDFLAMGLAEKL----------------TSANRQIYLTFPADS 381
L+ ++ + + + LA A+ + +++ QIYLTFPA+S
Sbjct: 373 LSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAES 432
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
TF ++DV+NYF +GPV+DVRIP Q++RMFGFV+F PETV IL R NPHFIC SRVLV
Sbjct: 433 TFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLV 492
Query: 442 KPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQA 501
KPY+EK K V+ R +M P P + +D L + + ++R++L E+
Sbjct: 493 KPYREKSKCVD-RTCVDNIKSMVPYCPPRFFE----FDQELYTAEYDASRLMRKQLAEKR 547
Query: 502 ELQQAIELQRRR 513
E+ +E++RRR
Sbjct: 548 EM--LLEMERRR 557
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M+ + + F R++ ++PE+ KI G +L+++ E +L++LA GPE + A I K+
Sbjct: 50 MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAA 109
Query: 61 LGL 63
L +
Sbjct: 110 LTV 112
>gi|302785371|ref|XP_002974457.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
gi|300158055|gb|EFJ24679.1| hypothetical protein SELMODRAFT_101113 [Selaginella moellendorffii]
Length = 355
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 152/320 (47%), Gaps = 47/320 (14%)
Query: 151 AKNDVGVVDSGGNSSGNDYMEELPFNDYLSFLDESSKNEDFTDPRSQFSNWGQDLNNGGD 210
AK ++G++ SGG S+G+ + L + E S+ SQ QDL++ +
Sbjct: 57 AKQELGLISSGGGSAGD---QALAIDSIPCLGAEGSQVLGLG---SQSPVVAQDLSDIWE 110
Query: 211 VHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGV 270
+ A + + ++PCLYFARG+ CK +G
Sbjct: 111 RPSYLEKLTRADHVAAVNATSPSSPSWKPCLYFARGY------CK------------HGS 152
Query: 271 IVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQ--- 327
S + + G + D + ++A + S S P Y + L+
Sbjct: 153 ACRSSSDLTGSSMV--DSLAGLEAEMRELLTGRRTPVSIASLPQLYHEKFGKSLQADGYL 210
Query: 328 NDPQRAAAATLMLNDEFYKF-----------GQGRA----ERNDFLAMGLAEKLTSAN-- 370
+ QR A L K GQ + + F+A G +AN
Sbjct: 211 TESQRHGKAGHSLTKLLIKLRATVTLIDRPHGQHAVVLAEDAHKFMAYGQDSSAIAANPS 270
Query: 371 -RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARG 429
RQIYLTFPA+S F +EDV+ +FS FGPVQDVRIPYQQKRMFGFVTF Y ETV+ ILA G
Sbjct: 271 SRQIYLTFPAESGFSEEDVTTHFSSFGPVQDVRIPYQQKRMFGFVTFTYSETVRTILAEG 330
Query: 430 NPHFICDSRVLVKPYKEKGK 449
NPH+IC +RVLVKPYKEKG+
Sbjct: 331 NPHYICGARVLVKPYKEKGR 350
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 46/66 (69%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD +A ++ R++ +D N KIMGY+L+QD+ E+++L LA +++++A + RAK +
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 LGLSSN 66
LGL S+
Sbjct: 61 LGLISS 66
>gi|302808135|ref|XP_002985762.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
gi|300146671|gb|EFJ13340.1| hypothetical protein SELMODRAFT_122578 [Selaginella moellendorffii]
Length = 353
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 78/98 (79%), Gaps = 3/98 (3%)
Query: 355 NDFLAMGLAEKLTSAN---RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMF 411
+ F+A G +AN RQIYLTFPA+S F +EDV+ +FS FGPVQDVRIPYQQKRMF
Sbjct: 251 HKFMAYGQDSSAIAANPSSRQIYLTFPAESGFSEEDVTTHFSSFGPVQDVRIPYQQKRMF 310
Query: 412 GFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGK 449
GFVTF Y ETV+ ILA GNPH+IC +RVLVKPYKEKG+
Sbjct: 311 GFVTFTYSETVRTILAEGNPHYICGARVLVKPYKEKGR 348
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 46/66 (69%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD +A ++ R++ +D N KIMGY+L+QD+ E+++L LA +++++A + RAK +
Sbjct: 1 MDVEEARRAVYTRVQCLDSANVLKIMGYLLLQDISEKEMLELARSSDSVVEAFVARAKQE 60
Query: 61 LGLSSN 66
LGL S+
Sbjct: 61 LGLISS 66
>gi|218185150|gb|EEC67577.1| hypothetical protein OsI_34930 [Oryza sativa Indica Group]
Length = 581
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 72/83 (86%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
RQIYLTFP DS F EDV NYFS++G VQDVRIPYQ+KRMFGFVTF Y +TVKLILA+GN
Sbjct: 318 RQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKRMFGFVTFTYQKTVKLILAKGN 377
Query: 431 PHFICDSRVLVKPYKEKGKIVEK 453
PH+ICD+RVLVKPYKEK K+ K
Sbjct: 378 PHYICDARVLVKPYKEKDKVPNK 400
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 42/61 (68%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M ++AT ++F R+++++P A I+G +L +D E D++ LA GP+ L+Q++I + ++
Sbjct: 152 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIHLACGPDNLLQSIIAKVRTD 211
Query: 61 L 61
L
Sbjct: 212 L 212
>gi|449463743|ref|XP_004149591.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
gi|449518519|ref|XP_004166289.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
Length = 528
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 128/254 (50%), Gaps = 55/254 (21%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGG---------DVNGVIVGSPNKMDGF------- 281
R C Y+ +GFCK+G SC+++H G +VN V P ++
Sbjct: 166 RTCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVEL 225
Query: 282 -----------------YLQQHDEIMRMKA-AAHQQRLAASQFASGVSPPLPYDKCMDFL 323
Y +++ ++++ + QR S F+ L
Sbjct: 226 LKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFS-----------LTKLL 274
Query: 324 LRQQNDPQRA----AAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPA 379
R +N Q ++L ++ KF R +RND + S+ RQIY+TFPA
Sbjct: 275 TRLKNSIQVIDRPHGQHAVILAEDAPKFMDHRKDRND------PGPIVSSARQIYMTFPA 328
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRV 439
DSTF ++DVS+YF +G V+DVRIP QQ+RMFGFVTF ETVKLIL+ + H IC +RV
Sbjct: 329 DSTFTEDDVSDYFRQYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARV 388
Query: 440 LVKPYKEKGKIVEK 453
LVKPY+EK K++E+
Sbjct: 389 LVKPYREKSKLLER 402
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 3 EFDA-TSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQL 61
EF A T +F+RI IDP+N KI+G++L+ D ++++ RLA E+ ++ ++ AK++L
Sbjct: 2 EFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTEL 61
Query: 62 GLSSNTFSTSTPTSP-SLNNNNP 83
S P SP ++ N P
Sbjct: 62 ---HQLRSMPVPVSPLAIRNRQP 81
>gi|357115916|ref|XP_003559731.1| PREDICTED: zinc finger CCCH domain-containing protein 54-like
[Brachypodium distachyon]
Length = 552
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 161/336 (47%), Gaps = 51/336 (15%)
Query: 218 SFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGF-----------GDGGD 266
S++A+ G N G RPC YF +G CKNG++C + H G+GG
Sbjct: 153 SYAATSPGAGGPRRRSNNGRRPCHYFFKGICKNGQNCHYSHHQVYADMDHQHHLQGNGG- 211
Query: 267 VNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQ 326
G GS +++ + + H +R Q S S P Y + L+
Sbjct: 212 --GTTPGSLERLE----------VEITELLHSRR---GQPVSIASLPTLYGEMYGKGLQA 256
Query: 327 Q---NDPQRAAAATLMLNDEFYKFGQGR------AERNDFLAMGLAE----------KLT 367
+ QR A L + + R + + LA A+ +
Sbjct: 257 DGYLTESQRHGKAGYSLTKLLSRLNKIRVIERPHGQHSVVLAEDAAKYTDCRSDRGGDMP 316
Query: 368 SANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 427
+++ QIYLTFP+DS+F ++DV+NYF +GPV+DVRIP Q +RMFGFV+F PETV +L
Sbjct: 317 ASSNQIYLTFPSDSSFTEDDVANYFGQYGPVRDVRIPCQDQRMFGFVSFQNPETVTTLLT 376
Query: 428 RGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSP-CSSPSGVDSR-DPYDLHLGS- 484
R NPHFIC SRVL KPY+EK K + +R + P S P + + P+ L
Sbjct: 377 RRNPHFICGSRVLAKPYREKTKCINERSSIEVVYKVRPSLSLPQKEEKKLHPHQFWLTDL 436
Query: 485 -KMFTQELMLRRKLEEQAELQQAIELQRRRLMNLQL 519
+ + R++L E+ + + +EL+RR L L++
Sbjct: 437 PAEYDSPRLARKQLVEKRD-NRLLELERRHLAGLRV 471
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 41/62 (66%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M+ + T ++F+R++ +DP+N KI+G IL+++ E +++LA GP+ + A + AK+
Sbjct: 1 MESAELTKLVFSRVQKVDPDNVCKIVGCILLREPDEDSMVQLAYGPDATLVATVVDAKAT 60
Query: 61 LG 62
L
Sbjct: 61 LA 62
>gi|218186344|gb|EEC68771.1| hypothetical protein OsI_37303 [Oryza sativa Indica Group]
Length = 430
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 88/125 (70%), Gaps = 9/125 (7%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
RQIYLTFP DS F EDV NYFS++G VQDVRIPYQ+K MFGFVTF Y +TVKLILA+GN
Sbjct: 167 RQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLILAKGN 226
Query: 431 PHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRD-PYDL--HLGSKMF 487
PH+ICD+RVLVKPYKEK K+ K + ++ C P + + P+D HL S M
Sbjct: 227 PHYICDARVLVKPYKEKDKVPNKFRH------VNHCLIPLRIFAHILPFDWGHHLSSPMG 280
Query: 488 TQELM 492
+ L+
Sbjct: 281 SHVLL 285
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 43/61 (70%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M ++AT ++F R+++++P A I+G +L +D E D++RLA GP+ L+Q++I + ++
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|222616541|gb|EEE52673.1| hypothetical protein OsJ_35055 [Oryza sativa Japonica Group]
Length = 430
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 88/125 (70%), Gaps = 9/125 (7%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGN 430
RQIYLTFP DS F EDV NYFS++G VQDVRIPYQ+K MFGFVTF Y +TVKLILA+GN
Sbjct: 167 RQIYLTFPPDSIFSKEDVCNYFSMYGMVQDVRIPYQEKCMFGFVTFAYQKTVKLILAKGN 226
Query: 431 PHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRD-PYDL--HLGSKMF 487
PH+ICD+RVLVKPYKEK K+ K + ++ C P + + P+D HL S M
Sbjct: 227 PHYICDARVLVKPYKEKDKVPNKFRH------VNHCLIPLRIFAHILPFDWGHHLSSPMG 280
Query: 488 TQELM 492
+ L+
Sbjct: 281 SHVLL 285
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 43/61 (70%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M ++AT ++F R+++++P A I+G +L +D E D++RLA GP+ L+Q++I + ++
Sbjct: 1 MGAYEATKVVFARLQALEPNLAPNIIGMLLTKDNNEMDMIRLACGPDNLLQSIIAKVRTD 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|15224480|ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
gi|75337298|sp|Q9SJ41.1|C3H18_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 18;
Short=AtC3H18
gi|4755187|gb|AAD29054.1| hypothetical protein [Arabidopsis thaliana]
gi|330250805|gb|AEC05899.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
thaliana]
Length = 536
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 135/244 (55%), Gaps = 44/244 (18%)
Query: 240 CLYFARGFCKNGESCKFVHG-------GFGDGGDVNGVI-----VGSP---NKMDGFYLQ 284
C YF +GFCK+G +C++ HG F + N + V SP K++G +
Sbjct: 162 CHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKLEGEII- 220
Query: 285 QHDEIMRMKAAA----------HQQRLAASQFASG-VSPPLPYDKC----MDFLLRQQND 329
E+++++ A + ++ + A G ++ + K L R +N
Sbjct: 221 ---ELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNT 277
Query: 330 PQRA----AAATLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKD 385
+ +++L ++ KF + ERN+ A + + +RQIYLTFPA+S+F +
Sbjct: 278 IRLVDRPHGQHSVILAEDASKFVEYTGERNEHGA------ILAGSRQIYLTFPAESSFTE 331
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
DVS YF+ +G V+DVRIP QQKRM+GFVTF ETVK ILA+GNPHFIC++RVLVKPY+
Sbjct: 332 HDVSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYR 391
Query: 446 EKGK 449
EK +
Sbjct: 392 EKSR 395
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILI-QDVKERDLLRLASGPETLMQALIFRAKS 59
M+ ++ +++ RI+ ++PENA+KI GY+L+ Q+ RD++RLA P+++M ++I K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 60 QLGLSSNTFST 70
+L +S+ + +
Sbjct: 61 ELARNSHHYHS 71
>gi|413957281|gb|AFW89930.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 433
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 114/216 (52%), Gaps = 36/216 (16%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAH 297
RPC YF +G CKNG+SC + H V G+ K++ EI+ + + H
Sbjct: 128 RPCHYFIKGICKNGQSCHYSHHR-----QEAQVCSGALEKLE-------LEIIELLKSRH 175
Query: 298 QQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERNDF 357
Q L+ + P L D+ P L + YK R ER
Sbjct: 176 GQPLSIASL-----PTLYGDR-----------PHGQHYVVLAEDAGRYKELMSRGERGG- 218
Query: 358 LAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFV 417
+ S++ Q+YLTFP++STF +EDV+NYF ++G V+DVRIP+Q+KRMFGFV+F
Sbjct: 219 -------DMGSSSHQVYLTFPSESTFMEEDVANYFGLYGSVRDVRIPWQEKRMFGFVSFH 271
Query: 418 YPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
PETV IL PHFI +SRVLVK Y EK K +E+
Sbjct: 272 NPETVNTILTMRIPHFIGESRVLVKRYIEKSKCIER 307
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + + R+K ++PENASKI+G IL+++ +D+L+LA G + + A I AK+
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|414873767|tpg|DAA52324.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 485
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 104/173 (60%), Gaps = 30/173 (17%)
Query: 325 RQQNDPQRAAAATLMLNDEFYKF--GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADST 382
++Q RAA L+ ++ ++F R +R D + + A RQI
Sbjct: 332 KKQMATLRAAVGMLLGGEDMHRFPVRSPRMDRGDLIC-------SPAARQI--------- 375
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVK 442
VSNYFS+FGPVQDVRIPYQQK MFGFVTFVY ETVK+I ++GNPHF+C +RVLVK
Sbjct: 376 -----VSNYFSMFGPVQDVRIPYQQKHMFGFVTFVYAETVKVIPSKGNPHFVCYARVLVK 430
Query: 443 PYKEKGKI---VEKRQQQFERG-NMSPCSSPSG-VDSRDPYDLHL--GSKMFT 488
PYKEKGKI K Q G C+SP+ +D RDPY L L G+++F+
Sbjct: 431 PYKEKGKIPGRFRKLQHAHHGGAEFGDCASPTRLLDFRDPYALLLLSGAQVFS 483
>gi|302755024|ref|XP_002960936.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
gi|300171875|gb|EFJ38475.1| hypothetical protein SELMODRAFT_437396 [Selaginella moellendorffii]
Length = 523
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Query: 236 GYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAA 295
++PC+Y++RG CK+G C+F+H G + +G + + ++ L+ E++R + +
Sbjct: 203 AWKPCVYYSRGHCKHGSGCRFLHTPNSLGIEEHG----TESALERLELEI-QELLRARKS 257
Query: 296 AHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQGRAERN 355
L + L D FL + + L Q ++
Sbjct: 258 PVPISLLPQMYFEEFGSALHVD---GFLATPEAVQGSGLTSLLCHMKNTLVIDQPNGQQA 314
Query: 356 DFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVT 415
L + +A+R S F +EDV+ +FS +GPVQDVRIPYQQKRMFGFVT
Sbjct: 315 VVLVEESSRLAVAAHRGDNYDHNGISAFTEEDVNAHFSAYGPVQDVRIPYQQKRMFGFVT 374
Query: 416 FVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR 454
F++ ETVK ILA GNPH++C +RVLVKPY++K K +K+
Sbjct: 375 FIHGETVKTILAEGNPHYVCGARVLVKPYRDKVKYTDKK 413
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++ T +L+ R++++DP SKI+GY+L+QD E+D+LR+A G + L+ +++ +AK +
Sbjct: 1 MDPYELTRMLYARVQALDPRYVSKIIGYLLLQDEAEQDMLRMALGSDALLFSVVDKAKQE 60
Query: 61 LGLS 64
LGLS
Sbjct: 61 LGLS 64
>gi|413957279|gb|AFW89928.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 381
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 116/231 (50%), Gaps = 27/231 (11%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAH 297
RPC YF +G CKNG+SC + H V G+ K++ EI+ + + H
Sbjct: 128 RPCHYFIKGICKNGQSCHYSHHR-----QEAQVCSGALEKLE-------LEIIELLKSRH 175
Query: 298 QQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLML--------------NDE 343
Q L+ + + D L + +A + L
Sbjct: 176 GQPLSIASLPTLYGDRYGKSLKADGYLTESKRHGKAGYSLSRLISRLSKITTIERPHGQH 235
Query: 344 FYKFGQGRAERNDFLAMG-LAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVR 402
+ + + ++ G + S++ Q+YLTFP++STF +EDV+NYF ++G V+DVR
Sbjct: 236 YVVLAEDAGRYKELMSRGERGGDMGSSSHQVYLTFPSESTFMEEDVANYFGLYGSVRDVR 295
Query: 403 IPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
IP+Q+KRMFGFV+F PETV IL PHFI +SRVLVK Y EK K +E+
Sbjct: 296 IPWQEKRMFGFVSFHNPETVNTILTMRIPHFIGESRVLVKRYIEKSKCIER 346
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + + R+K ++PENASKI+G IL+++ +D+L+LA G + + A I AK+
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|226500396|ref|NP_001140295.1| uncharacterized protein LOC100272340 [Zea mays]
gi|194698886|gb|ACF83527.1| unknown [Zea mays]
gi|413957280|gb|AFW89929.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 472
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 116/231 (50%), Gaps = 27/231 (11%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAH 297
RPC YF +G CKNG+SC + H V G+ K++ EI+ + + H
Sbjct: 128 RPCHYFIKGICKNGQSCHYSHHR-----QEAQVCSGALEKLE-------LEIIELLKSRH 175
Query: 298 QQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLML--------------NDE 343
Q L+ + + D L + +A + L
Sbjct: 176 GQPLSIASLPTLYGDRYGKSLKADGYLTESKRHGKAGYSLSRLISRLSKITTIERPHGQH 235
Query: 344 FYKFGQGRAERNDFLAMG-LAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVR 402
+ + + ++ G + S++ Q+YLTFP++STF +EDV+NYF ++G V+DVR
Sbjct: 236 YVVLAEDAGRYKELMSRGERGGDMGSSSHQVYLTFPSESTFMEEDVANYFGLYGSVRDVR 295
Query: 403 IPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
IP+Q+KRMFGFV+F PETV IL PHFI +SRVLVK Y EK K +E+
Sbjct: 296 IPWQEKRMFGFVSFHNPETVNTILTMRIPHFIGESRVLVKRYIEKSKCIER 346
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD + + R+K ++PENASKI+G IL+++ +D+L+LA G + + A I AK+
Sbjct: 1 MDSSELHILALQRVKQVEPENASKILGCILLEEPDNQDMLQLAYGNDAEVHAKISHAKAM 60
Query: 61 L 61
L
Sbjct: 61 L 61
>gi|75328302|sp|Q84ZT0.1|C3H51_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
51; Short=OsC3H51
gi|27817837|dbj|BAC55605.1| RRM-containing protein-like [Oryza sativa Japonica Group]
Length = 513
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 51/241 (21%)
Query: 241 LYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQR 300
+F RG+CK G +C+F HG + + +P ++ F A+ +
Sbjct: 184 FHFFRGYCKKGVNCQFFHGSVPE--------LHNPRQVHPF------------ASLSKLD 223
Query: 301 LAASQFASGVSPPLPYDKCMDFLLRQQNDPQR---------------AAAATLML----- 340
+ + G+ PP+ D+ + P R + +L++
Sbjct: 224 MEIRELLIGIPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGLNTI 283
Query: 341 ------NDEFYKFGQGRAERNDFLAMGLAEKLT-----SANRQIYLTFPADSTFKDEDVS 389
+ +++ A + +GLA + + QIY+TFP S F D+DV
Sbjct: 284 RVVEREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVHSKFTDDDVE 343
Query: 390 NYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGK 449
NYF FGPV VRIPYQ+KRMFGFV+F+Y ETV+LIL++G HFIC RVLVK Y EK +
Sbjct: 344 NYFKQFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKRYMEKSE 403
Query: 450 I 450
+
Sbjct: 404 L 404
>gi|297847526|ref|XP_002891644.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
gi|297337486|gb|EFH67903.1| hypothetical protein ARALYDRAFT_314515 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 96/155 (61%), Gaps = 19/155 (12%)
Query: 395 FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR 454
FGPV DVRIP Q++RMFGFVTF ETV +LA+GN H I +S ++
Sbjct: 196 FGPVVDVRIPNQERRMFGFVTFANAETVTTVLAQGNSHLIGES------------AQQQL 243
Query: 455 QQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMF---TQELMLRRKLEEQAELQQAIEL-- 509
Q ER N+ SG+D RD + G MF TQE+ RR + QA+LQQAIE+
Sbjct: 244 NQLLERENLLHHPRLSGMDPRDQDESRFGPMMFRNPTQEMRQRRNV--QADLQQAIEVED 301
Query: 510 QRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPA 544
QRRRL+NL+LP+++N S+HHHQRS S+ SP P+
Sbjct: 302 QRRRLLNLKLPDMENKSIHHHQRSPSIASPAHFPS 336
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD T+ + RI +++PENA KI+GY L+QD+++ DL++LA G + F
Sbjct: 1 MDPGGPTATIIERIITLEPENAFKIIGYFLLQDIEDCDLIQLAFGTDQSSPRNEF----- 55
Query: 61 LGLSSNTFSTSTPTSPSLNNN----NPFSRLNNCSNNANNNHVSRHPFAQMSPRVVTNN- 115
L S N P SPSL +N NP R S + PFA + R + N
Sbjct: 56 LDFSRNP----NPLSPSLTSNTFGYNPDFRHEGSSQQQQQQWSNHFPFANLHQRSFSANE 111
Query: 116 -GY 117
GY
Sbjct: 112 PGY 114
>gi|125600867|gb|EAZ40443.1| hypothetical protein OsJ_24897 [Oryza sativa Japonica Group]
Length = 432
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 62/261 (23%)
Query: 241 LYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQR 300
+F RG+CK G +C+F HG + + +P ++ F A+ +
Sbjct: 140 FHFFRGYCKKGVNCQFFHGSVPE--------LHNPRQVHPF------------ASLSKLD 179
Query: 301 LAASQFASGVSPPLPYDKCMDFLLRQQNDPQR---------------AAAATLML----- 340
+ + G+ PP+ D+ + P R + +L++
Sbjct: 180 MEIRELLIGIPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGLNTI 239
Query: 341 ------NDEFYKFGQGRAERNDFLAMGLAEKLT-----SANRQIYLTFPADSTFKDEDVS 389
+ +++ A + +GLA + + QIY+TFP S F D+DV
Sbjct: 240 RVVEREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVHSKFTDDDVE 299
Query: 390 NYFSI---------FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVL 440
NYF FGPV VRIPYQ+KRMFGFV+F+Y ETV+LIL++G HFIC RVL
Sbjct: 300 NYFKYCLNFIVTRQFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVL 359
Query: 441 VKPYKEKGKI--VEKRQQQFE 459
VK Y EK ++ + ++ +QF+
Sbjct: 360 VKRYMEKSELRKIYRKNKQFD 380
>gi|297816588|ref|XP_002876177.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322015|gb|EFH52436.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 114/216 (52%), Gaps = 26/216 (12%)
Query: 238 RPCLYFARGFCKNGESC---KFVHGGFGDGGDVNGVIV------GSPNKMDGFYLQQHDE 288
+ C YF +GFCK+G +C + V +I G+P + + +++
Sbjct: 150 KICHYFNKGFCKHGNNCSDEEHVVSAVSLEKLEREIIYLLKSRRGAPISIASLPMMYYEK 209
Query: 289 IMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRA----AAATLMLNDEF 344
R A + L SQ L L+R +N + +++L ++
Sbjct: 210 YGRTLQA--EGYLTESQRHGKAGYSLT-----KLLVRLKNTIRLIDRPHGQHSVILAEDV 262
Query: 345 YKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIP 404
KF + E+++ A + + +RQIYLTFPA+S+F + DVSNYFS GPV+DVRIP
Sbjct: 263 LKFVEYTGEKSEHGA------ILAGSRQIYLTFPAESSFTEHDVSNYFSKVGPVEDVRIP 316
Query: 405 YQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVL 440
QQKRMFGF TF Y E VK ILA+GNPHF+C +RVL
Sbjct: 317 CQQKRMFGFETFAYTEDVKHILAKGNPHFVCGARVL 352
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Query: 12 NRIKSIDPENASKIMGYILI-QDVKERDLLRLASGPETLMQALIFRAKSQLGLSSNTFST 70
NRI+ ++PENA KI+GY+L+ Q +RD++RLA P+++M+++I K +L +N
Sbjct: 6 NRIQQLEPENALKIIGYLLLMQHHNDRDMIRLAFCPDSVMRSMINCVKYEL---ANNSHC 62
Query: 71 STPTS 75
PTS
Sbjct: 63 DIPTS 67
>gi|125558949|gb|EAZ04485.1| hypothetical protein OsI_26636 [Oryza sativa Indica Group]
Length = 432
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 124/248 (50%), Gaps = 36/248 (14%)
Query: 241 LYFARGFCKNGESCKFVHGGFGDGGDVNGVI-VGSPNKMDGFYLQQHDEIMRMKAAAHQQ 299
+F RG+CK G +C+F HG + + V S +K+D ++ + ++ +
Sbjct: 140 FHFFRGYCKKGVNCQFFHGSVPELHNPRQVHPFASLSKLD---MEIRELLIGIPPPVAVD 196
Query: 300 RLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLML------------NDEFYKF 347
RL + F P P +L Q + + T +L + +++
Sbjct: 197 RLPSMYFEKYGKPLGP----DGWLTESQQHGRTGCSLTSLLMGLNTIRVVEREHGQYHVV 252
Query: 348 GQGRAERNDFLAMGLAEKLT-----SANRQIYLTFPADSTFKDEDVSNYFSI-------- 394
A + +GLA + + QIY+TFP S F D+DV NYF
Sbjct: 253 LVEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVHSKFTDDDVENYFKYCLNFIVTR 312
Query: 395 -FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKI--V 451
FGPV VRIPYQ+KRMFGFV+F+Y ETV+LIL++G HFIC SRVLVK Y EK ++ +
Sbjct: 313 QFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGSRVLVKRYMEKPELRKI 372
Query: 452 EKRQQQFE 459
++ +QF+
Sbjct: 373 YRKNKQFD 380
>gi|224094721|ref|XP_002310207.1| predicted protein [Populus trichocarpa]
gi|224148376|ref|XP_002336641.1| predicted protein [Populus trichocarpa]
gi|222836422|gb|EEE74829.1| predicted protein [Populus trichocarpa]
gi|222853110|gb|EEE90657.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 122 bits (307), Expect = 5e-25, Method: Composition-based stats.
Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 15/101 (14%)
Query: 201 WGQDLNNGG------DVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESC 254
W + + GG D HL HRR FS SDACFG ED GF LGY+PCL FAR FCKNGESC
Sbjct: 5 WTKGVRLGGYPIANRDSHL-HRRRFSESDACFGAEDGGFGLGYKPCLCFAREFCKNGESC 63
Query: 255 KFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAA 295
KFVHGG GV+VGSP + + YLQ +E+MRMKAA
Sbjct: 64 KFVHGG--------GVLVGSPRETEELYLQLQEEMMRMKAA 96
>gi|413922880|gb|AFW62812.1| putative cytochrome P450 superfamily protein [Zea mays]
Length = 944
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%), Gaps = 5/92 (5%)
Query: 398 VQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKI---VEKR 454
+QDVRIPYQQKRMFGFVTFVY ETVK+IL++GNPHF+CD+RVLVKPYKEKGK+ K
Sbjct: 636 LQDVRIPYQQKRMFGFVTFVYAETVKVILSKGNPHFVCDARVLVKPYKEKGKVPGRFRKL 695
Query: 455 QQQFERG-NMSPCSSPSG-VDSRDPYDLHLGS 484
Q G C+SP+G +DSRDPY L L S
Sbjct: 696 QHTHHGGAEFVGCASPTGLLDSRDPYALLLLS 727
>gi|212275268|ref|NP_001130674.1| uncharacterized protein LOC100191777 [Zea mays]
gi|194689800|gb|ACF78984.1| unknown [Zea mays]
Length = 259
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 91/126 (72%), Gaps = 12/126 (9%)
Query: 410 MFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSP 469
MFGFVTFVYPETVKLILA+GNPHFICD+RVLVKPYKEKGK+ +K ++Q +G +
Sbjct: 1 MFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQLQGERAVDFFS 60
Query: 470 SGVDSRDPY-DLH-LGSKMFTQ-----ELMLRRK-----LEEQAELQQAIELQRRRLMNL 517
+G+D R+ + DLH LG++M E++LRRK AELQQA+ELQ RRLM L
Sbjct: 61 NGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQQQAAAAELQQAMELQSRRLMRL 120
Query: 518 QLPNLK 523
QL +LK
Sbjct: 121 QLLDLK 126
>gi|302770004|ref|XP_002968421.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
gi|300164065|gb|EFJ30675.1| hypothetical protein SELMODRAFT_65612 [Selaginella moellendorffii]
Length = 204
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 110/217 (50%), Gaps = 45/217 (20%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAH 297
+PC+YFA+GFCKNG SC+F+H D + SP K D+ + M+
Sbjct: 5 KPCMYFAKGFCKNGSSCRFIH-------DSALLQSDSPPK---------DQFLSMERLEF 48
Query: 298 Q-QRLAASQFASGVS----PPLPYDKCMDFLLRQ--QNDPQRAAAATLMLNDEFYKFGQ- 349
Q Q L S+ +S P + ++K +L ++ QR A + L KF
Sbjct: 49 QLQELLRSRKGVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPSYTLTKLLSKFQSV 108
Query: 350 ---GRAERNDFLAMGLAEKL----------------TSANRQIYLTFPADSTFKDEDVSN 390
R R A+ LAE + + +RQIYLTFP DS F +EDV+
Sbjct: 109 TVVERPHRQH--ALMLAEDVPKYSAHKVDLDECNDPSPCSRQIYLTFPCDSNFSEEDVAT 166
Query: 391 YFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 427
+F +GPV+DVRIP Q KRMFGFVTF Y ETV++ILA
Sbjct: 167 HFRAYGPVEDVRIPTQHKRMFGFVTFTYAETVRMILA 203
>gi|302807700|ref|XP_002985544.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
gi|300146750|gb|EFJ13418.1| hypothetical protein SELMODRAFT_45393 [Selaginella moellendorffii]
Length = 197
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 36/211 (17%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAH 297
+PC+Y++RGFCK+G SC+F H GD + S ++D ++ E++ + +
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDHIA--GDGSSPSPSSLERLD----RELQELLSSRTSPV 54
Query: 298 QQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAAT-------------------- 337
+ PL + +L Q + T
Sbjct: 55 SIAALPQLYYERFGRPL---QAEGYLTESQRHGKSGYNLTRLLSKLKGSITVIDRPHGQH 111
Query: 338 -LMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFG 396
++L ++ +KF E D + ++RQIYLTFPA+S+F ++DVS +F +G
Sbjct: 112 AVVLAEDAHKFATFAGEHYDL------SGVNPSSRQIYLTFPAESSFSEDDVSTHFRAYG 165
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILA 427
PVQDVRIP+QQKRMFGFVTFVYPETVK++L+
Sbjct: 166 PVQDVRIPFQQKRMFGFVTFVYPETVKIVLS 196
>gi|302810669|ref|XP_002987025.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
gi|300145190|gb|EFJ11868.1| hypothetical protein SELMODRAFT_45395 [Selaginella moellendorffii]
Length = 197
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 38/212 (17%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGF-GDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAA 296
+PC+Y++RGFCK+G SC+F H GDG + + ++D ++ E++ + +
Sbjct: 1 KPCVYYSRGFCKHGSSCRFSHDHITGDGSSPSPSSL---ERLD----RELQELLSSRTSP 53
Query: 297 HQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLN--------------- 341
+ PL + +L Q + T +L+
Sbjct: 54 VSIAALPQLYYERFGRPL---QAEGYLTESQRHGKSGYNLTRLLSKLKGSITVIDRPHGQ 110
Query: 342 ------DEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIF 395
++ +KF E D + ++RQIYLTFPA+S+F ++DVS +F +
Sbjct: 111 HAVVLAEDAHKFATFAGEHYDL------SGVNPSSRQIYLTFPAESSFSEDDVSIHFRAY 164
Query: 396 GPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 427
GPVQDVRIP+QQKRMFGFVTFVYPETVK++L+
Sbjct: 165 GPVQDVRIPFQQKRMFGFVTFVYPETVKIVLS 196
>gi|302774330|ref|XP_002970582.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
gi|300162098|gb|EFJ28712.1| hypothetical protein SELMODRAFT_65615 [Selaginella moellendorffii]
Length = 205
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 111/218 (50%), Gaps = 46/218 (21%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAH 297
+PC+YFA+GFCKNG SC+F+H D + SP K D+ + M+
Sbjct: 5 KPCMYFAKGFCKNGSSCRFIH-------DSALLQSDSPPK---------DQFLSMERLEF 48
Query: 298 Q-QRLAASQFASGVS----PPLPYDKCMDFLL------RQQNDPQRAAAATLMLNDEFYK 346
Q Q L S+ +S P + ++K +L Q + T +L++ ++
Sbjct: 49 QLQELLRSRKGVPISVSSLPQIYFEKYGRWLEADGYVSESQRHAKPGYTLTKLLSNLYHF 108
Query: 347 F-GQGRAERNDFLAMGLAEKL----------------TSANRQIYLTFPADSTFKDEDVS 389
F R R A+ LAE + + +RQIYLTFP DS F +EDV+
Sbjct: 109 FLSFPRPHRQH--ALMLAEDVPKYSAHKVDLDECNDPSPCSRQIYLTFPCDSNFSEEDVA 166
Query: 390 NYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILA 427
+F +GPV+DVRIP Q KRMFGFVTF Y ETV++ILA
Sbjct: 167 THFRAYGPVEDVRIPTQHKRMFGFVTFTYAETVRMILA 204
>gi|15231722|ref|NP_190866.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|7529722|emb|CAB86902.1| putative protein [Arabidopsis thaliana]
gi|332645500|gb|AEE79021.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 381
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 34/211 (16%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAA- 296
+ C YF +GFCK+G +C H D V V GS K++ ++ E+++ + A
Sbjct: 168 KICHYFNKGFCKHGNNC---HNNLSDEEHV--VSPGSLEKLE----REIIELLKSRRGAP 218
Query: 297 ---------HQQRLAASQFASG-VSPPLPYDKC----MDFLLRQQNDPQRA----AAATL 338
+ ++ S A G ++ + K L R +N + ++
Sbjct: 219 ISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKAGFSLTKLLARLKNTIRLIDRPHGQHSV 278
Query: 339 MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPV 398
+L ++ KF + ER++ A + + +RQ+YLTFPA+S+F + DVSNYFS GPV
Sbjct: 279 ILAEDVSKFVEYTGERSEHGA------ILAGSRQVYLTFPAESSFTEHDVSNYFSEVGPV 332
Query: 399 QDVRIPYQQKRMFGFVTFVYPETVKLILARG 429
+DVRIP QQKRM+GFVTFVY ETVK ILA+
Sbjct: 333 EDVRIPCQQKRMYGFVTFVYMETVKRILAKA 363
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILI-QDVKERDLLRLASGPETLMQALIFRAKS 59
M+ +A +++ NRI ++PENASKI+GY+L+ QD +RD++RLA P+++M+++I K
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 60 QLGLSSN 66
+L +S+
Sbjct: 61 ELAKNSH 67
>gi|334183229|ref|NP_001185197.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332194558|gb|AEE32679.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 403
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 128/257 (49%), Gaps = 53/257 (20%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
+F D+ VS YF FGPV VRIP Q+++++GFV+F ETV IL + NPH I +S V
Sbjct: 185 SFTDQHVSTYFGNFGPVLSVRIPNQKEQVYGFVSFANAETVTTILDQENPHLIGESPV-- 242
Query: 442 KPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSK-------MFTQEL--M 492
N++ ++ +GV R+P+ + G K F E M
Sbjct: 243 --------------------NVTAAATTAGVGWREPFSVGNGPKGAMSRPRRFRNETHEM 282
Query: 493 LRRKLEEQAELQQAIEL--QRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQ 550
L+R EQA+ QQAIE+ Q RRL NLQLP ++N S+HHHQ S S+GS
Sbjct: 283 LQRNT-EQADPQQAIEVEDQIRRLSNLQLPGMENKSIHHHQPSPSIGS------------ 329
Query: 551 NVIFPSFVDNSTANNS----SNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHE 606
+ FPS V + V T+ ++ +E L + S + +ES +T +
Sbjct: 330 HAHFPSQVREGGSGTGEKDLEQVETSNEEHQGQEKSLENTLPDSSFGSTKESGETR---Q 386
Query: 607 SSAEILPCKFASMRKSA 623
+ ++I K AS+ +SA
Sbjct: 387 TESDIEETKKASLDQSA 403
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M DA + + RI +++PE+A KI+GYIL QD +L+RLA P AL +++ +
Sbjct: 1 MQPGDAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP-----ALHYKSSPR 55
Query: 61 ---LGLSSNTFSTSTPTSPSLNNN 81
L S N + P PSL N
Sbjct: 56 NEFLDFSRNPY----PLYPSLTGN 75
>gi|297835822|ref|XP_002885793.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331633|gb|EFH62052.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 119/246 (48%), Gaps = 60/246 (24%)
Query: 240 CLYFARGFCKNGESCKFVHG-------GFGDGGDVNGVIVGSPNKMDGFYLQQHD-EIMR 291
C YF +GFCK+G +C++ HG F + N + + + L++ + EI+
Sbjct: 162 CHYFNKGFCKHGNNCRYFHGQIIPERESFALMFNPNNNLSEEEHVVSPVSLEKLEGEIIE 221
Query: 292 MKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQ---NDPQRAAAA------------ 336
+ A +R A AS P+ Y + L+ + + QR A
Sbjct: 222 LLKA---RRGAPISIAS---LPMMYSETYGRTLQAEGYLTESQRHGKAGYSLTKLLARLK 275
Query: 337 -------------TLMLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTF 383
+++L ++ KF + ERN+ A + + +RQIYLTFPA+S+F
Sbjct: 276 NTIRLIDRPHGQHSVILAEDASKFVEYTGERNEHGA------ILAGSRQIYLTFPAESSF 329
Query: 384 KDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKP 443
+ DVS P D+ MFGFVTF ETVKLILA+GNPHFIC +RVLVKP
Sbjct: 330 TEHDVSTTL----PHSDI--------MFGFVTFACTETVKLILAKGNPHFICGARVLVKP 377
Query: 444 YKEKGK 449
Y+EK +
Sbjct: 378 YREKSR 383
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILI-QDVKERDLLRLASGPETLMQALIFRAKS 59
M+ ++ +++ NRI+ ++PENASKI+GY+L+ QD RD++RLA P+++M+++I K
Sbjct: 1 MNFTESMNVVHNRIQQLEPENASKIIGYLLLMQDNGNRDMIRLAFCPDSVMRSVINCVKY 60
Query: 60 QLGLSSNTF 68
+L +++ +
Sbjct: 61 ELAKNAHHY 69
>gi|15217947|ref|NP_175564.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12325375|gb|AAG52634.1|AC024261_21 hypothetical protein; 30893-28595 [Arabidopsis thaliana]
gi|332194557|gb|AEE32678.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 391
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 120/244 (49%), Gaps = 53/244 (21%)
Query: 395 FGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKR 454
FGPV VRIP Q+++++GFV+F ETV IL + NPH I +S V
Sbjct: 186 FGPVLSVRIPNQKEQVYGFVSFANAETVTTILDQENPHLIGESPV--------------- 230
Query: 455 QQQFERGNMSPCSSPSGVDSRDPYDLHLGSK-------MFTQEL--MLRRKLEEQAELQQ 505
N++ ++ +GV R+P+ + G K F E ML+R EQA+ QQ
Sbjct: 231 -------NVTAAATTAGVGWREPFSVGNGPKGAMSRPRRFRNETHEMLQRNT-EQADPQQ 282
Query: 506 AIEL--QRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVIFPSFVDNSTA 563
AIE+ Q RRL NLQLP ++N S+HHHQ S S+GS + FPS V +
Sbjct: 283 AIEVEDQIRRLSNLQLPGMENKSIHHHQPSPSIGS------------HAHFPSQVREGGS 330
Query: 564 NNS----SNVTTAADQEPQKEVDAACILNNGSNNTKEESSKTEGSHESSAEILPCKFASM 619
V T+ ++ +E L + S + +ES +T ++ ++I K AS+
Sbjct: 331 GTGEKDLEQVETSNEEHQGQEKSLENTLPDSSFGSTKESGETR---QTESDIEETKKASL 387
Query: 620 RKSA 623
+SA
Sbjct: 388 DQSA 391
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
M DA + + RI +++PE+A KI+GYIL QD +L+RLA P AL +++ +
Sbjct: 1 MQPGDAIATIIKRILTLEPEHALKIIGYILFQDFGHTELIRLAFCP-----ALHYKSSPR 55
Query: 61 ---LGLSSNTFSTSTPTSPSLNNN 81
L S N + P PSL N
Sbjct: 56 NEFLDFSRNPY----PLYPSLTGN 75
>gi|357116531|ref|XP_003560034.1| PREDICTED: putative zinc finger CCCH domain-containing protein
51-like [Brachypodium distachyon]
Length = 522
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 100/236 (42%), Gaps = 62/236 (26%)
Query: 239 PC-LYFARGFCKNGESCKFVHGGFGDGG-------------------DVNGVIVGSPNKM 278
PC Y + G CK G SC+F HG FG G D+ + +
Sbjct: 129 PCRFYMSTGVCKKGWSCRFSHG-FGPLGMLEMAIRELLMNRPLTRVADLPVYLACYKQPL 187
Query: 279 DGFYLQQHDEIMRMKAAAHQQRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATL 338
G++ Q I+ + A H L + +F++ ++ P A
Sbjct: 188 QGWWNQSTGSIISLLARLHTVTLIVDRMGQ------------NFIVLLEHAPSYLGPA-- 233
Query: 339 MLNDEFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDED--VSNYFSIFG 396
+N G G +IY+TF A+ + + VSNYFS +G
Sbjct: 234 -VNLNVMDTGSGF-------------------NKIYITFTAEGRARCTESLVSNYFSQYG 273
Query: 397 PVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNP---HFICDSRVLVKPYKEKGK 449
PV VR+P R+ GFVTF YP+TV+L+L NP HFIC + VLVKPYK G+
Sbjct: 274 PVLKVRMP--TPRLCGFVTFQYPQTVELLLFEWNPQVPHFICGATVLVKPYKHSGE 327
>gi|242050694|ref|XP_002463091.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
gi|241926468|gb|EER99612.1| hypothetical protein SORBIDRAFT_02g037630 [Sorghum bicolor]
Length = 211
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 358 LAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFV 417
+G++ +++N QI++ F S F +EDV +YFS +G V +VRIP Q KRM+GFV+F
Sbjct: 62 FKLGMSPASSNSN-QIFVVFMPGSKFTEEDVHSYFSQYGTVSNVRIPPQGKRMYGFVSFQ 120
Query: 418 YPETVKLILARGNPHFICDSRVLVKPYKEKGKI 450
P T + IL+ PHFIC RV VK YK+K ++
Sbjct: 121 DPGTAERILSERTPHFICGDRVCVKAYKDKDEL 153
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 10/68 (14%)
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAR---GNPHFICDSRV 439
+KD+D +++ GPV DVR +KRMFG+V+F +PETVK IL+ HFIC V
Sbjct: 147 YKDKDELDHY---GPVNDVR----KKRMFGYVSFKHPETVKRILSERCLRTSHFICGDHV 199
Query: 440 LVKPYKEK 447
V+PY+EK
Sbjct: 200 FVEPYREK 207
>gi|449532871|ref|XP_004173401.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like,
partial [Cucumis sativus]
Length = 156
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 1 MDEFDATSILFNRIKSIDPENASKIMGYILIQDVKERDLLRLASGPETLMQALIFRAKSQ 60
MD ++A+ I+F+RI+++DPENASKIMG +LIQD E++++RLA GPE L+ ++I +AK
Sbjct: 1 MDSYEASRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVILKAKKD 60
Query: 61 LGL 63
L L
Sbjct: 61 LSL 63
>gi|414887324|tpg|DAA63338.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 141
Score = 76.3 bits (186), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 367 TSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRM-FGFVTFVYPETVKLI 425
+SA+ +I++TF F V YFS +G V +V IP QKR FGFV+F+ E+VK I
Sbjct: 13 SSASNKIFITFNCIHIFTHTSVQKYFSQYGTVNEVIIPIMQKRPDFGFVSFLDSESVKQI 72
Query: 426 LARGNPHFICDSRVLVKPYKEKGKI 450
L+ PHFIC + V VK Y+EK ++
Sbjct: 73 LSERGPHFICGNEVHVKAYREKHEL 97
>gi|242033307|ref|XP_002464048.1| hypothetical protein SORBIDRAFT_01g011290 [Sorghum bicolor]
gi|241917902|gb|EER91046.1| hypothetical protein SORBIDRAFT_01g011290 [Sorghum bicolor]
Length = 301
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 26/152 (17%)
Query: 164 SSGNDYMEELPFNDYLSFLDESSKNEDFT--DPRSQFSNWGQDLNNG----------GDV 211
++G+ ++EL + L+FL++++ + D S+ + G G
Sbjct: 82 AAGDPLLDELQLQEQLAFLNDAAADHQLPLFDAASECRSPGAGDATGFFPYGGLGWANGG 141
Query: 212 HLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVI 271
HRRS S S+ C G+ D LG++PCLY+ARG+CKNG +C+FVHGG D +
Sbjct: 142 GPGHRRSSSVSELCLGSADG---LGWKPCLYYARGYCKNGSACRFVHGGLPDDAT---TL 195
Query: 272 VGSPNKMDGFYLQQ--HDEIMRMKAAAHQQRL 301
G+ KMD L+Q D + R K+ QRL
Sbjct: 196 AGA--KMDTTTLEQQCQDILFRSKS----QRL 221
>gi|414878425|tpg|DAA55556.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 430
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Query: 428 RGNPHFICDSRVLVKPYKEKGKI---VEKRQQQFERG-NMSPCSSPSG-VDSRDPYDLHL 482
+GNPHF+CD RVLVKPYKEKGK+ K Q G + C+SP+G +DSRDPY L L
Sbjct: 361 QGNPHFVCDVRVLVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALLL 420
Query: 483 --GSKMFT 488
G+++F+
Sbjct: 421 LSGAQVFS 428
>gi|413948586|gb|AFW81235.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 265
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Query: 428 RGNPHFICDSRVLVKPYKEKGKI---VEKRQQQFERG-NMSPCSSPSG-VDSRDPYDLHL 482
+GNPHF+CD RVLVKPYKEKGK+ K Q G + C+SP+G +DSRDPY L L
Sbjct: 196 QGNPHFVCDVRVLVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALLL 255
Query: 483 --GSKMFT 488
G+++F+
Sbjct: 256 LSGAQVFS 263
>gi|414887325|tpg|DAA63339.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 439
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 372 QIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNP 431
+I +TF ++S F DV NYFS +G V + R +++ M G V+FV ET K I++ P
Sbjct: 302 KICVTFKSESIFTHTDVQNYFSQYGTVSEERFS-EERHMHGHVSFVDLETAKRIISESGP 360
Query: 432 HFICDSRVLVKPYKEKGKI 450
HFIC + V K Y+EK ++
Sbjct: 361 HFICGNEVRAKAYREKHEL 379
>gi|297725823|ref|NP_001175275.1| Os07g0583500 [Oryza sativa Japonica Group]
gi|255677923|dbj|BAH94003.1| Os07g0583500 [Oryza sativa Japonica Group]
Length = 998
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 351 RAERNDFLAMGLAEKLTSANRQIYLTFPADS-TFKDEDVSNYFSIFGPVQDVRI---PYQ 406
R DF G ++ IY+T D E++ +YF FGPV +V + P
Sbjct: 207 RGRHRDFFGEG-------SDFTIYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGN 259
Query: 407 QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQ 457
+K FGFVTF +TV L+L++ PHFI +V VK Y E K +++ Q
Sbjct: 260 EKYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQ 310
>gi|27817839|dbj|BAC55607.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 552
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 351 RAERNDFLAMGLAEKLTSANRQIYLTFPADS-TFKDEDVSNYFSIFGPVQDVRI---PYQ 406
R DF G ++ IY+T D E++ +YF FGPV +V + P
Sbjct: 193 RGRHRDFFGEG-------SDFTIYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGN 245
Query: 407 QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQ 457
+K FGFVTF +TV L+L++ PHFI +V VK Y E K +++ Q
Sbjct: 246 EKYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQ 296
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 373 IYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ---QKRMFGFVTFVYPETVKLILARG 429
IY+T A + +++ +YF FGPV +V IP++ +K FGFVTF +TV L+L++
Sbjct: 375 IYITI-AKNILTWKNIRDYFKKFGPVINVYIPFKPDNEKHTFGFVTFENDDTVGLLLSKS 433
Query: 430 NPHFI 434
H I
Sbjct: 434 TSHSI 438
>gi|222637348|gb|EEE67480.1| hypothetical protein OsJ_24899 [Oryza sativa Japonica Group]
Length = 739
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 351 RAERNDFLAMGLAEKLTSANRQIYLTFPADS-TFKDEDVSNYFSIFGPVQDVRI---PYQ 406
R DF G ++ IY+T D E++ +YF FGPV +V + P
Sbjct: 297 RGRHRDFFGEG-------SDFTIYITINFDGGRLTKENIWDYFKKFGPVINVYLSCKPGN 349
Query: 407 QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQ 457
+K FGFVTF +TV L+L++ PHFI +V VK Y E K +++ Q
Sbjct: 350 EKYTFGFVTFENADTVSLLLSKSTPHFIFGVKVRVKRYLEWTKQEQRKLPQ 400
>gi|414870056|tpg|DAA48613.1| TPA: hypothetical protein ZEAMMB73_895706 [Zea mays]
Length = 330
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 7/45 (15%)
Query: 215 HRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHG 259
HR SFS SDA E A +RPC+Y+AR +CKNG SC+F HG
Sbjct: 268 HRWSFSLSDA----ESAA---SWRPCMYYAREYCKNGSSCRFFHG 305
>gi|413919194|gb|AFW59126.1| hypothetical protein ZEAMMB73_205521 [Zea mays]
Length = 464
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
Query: 490 ELMLRRKLEEQ---AELQQAIELQRRRLMNLQLPNLK 523
EL+LRRKLEE+ AELQ AIELQ RRLM LQL +LK
Sbjct: 239 ELLLRRKLEEEQQAAELQHAIELQSRRLMGLQLLDLK 275
>gi|414864203|tpg|DAA42760.1| TPA: hypothetical protein ZEAMMB73_353296 [Zea mays]
Length = 134
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 490 ELMLRRKLEEQ---AELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPIT 541
EL+LRRKLEEQ AELQ AIELQ RRLM LQL +LK + + ++ +P+
Sbjct: 58 ELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKARAAATAAAASALPTPVA 112
>gi|218199913|gb|EEC82340.1| hypothetical protein OsI_26639 [Oryza sativa Indica Group]
Length = 243
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 373 IYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ---QKRMFGFVTFVYPETVKLILARG 429
IY+T A + +++ +YF FGPV +V IP++ +K FGFVTF +TV L+L++
Sbjct: 168 IYITI-AKNILTWKNIRDYFKKFGPVINVYIPFKPDNEKHTFGFVTFENDDTVGLLLSKS 226
Query: 430 NPHFICDSRVLVK 442
H I V VK
Sbjct: 227 TSHSISGVEVRVK 239
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 384 KDEDVSNYFSI---FGPVQDVRI---PYQQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
K++ NY S+ FGPV +V + P +K FGFVTF + V L+L++ PHFI
Sbjct: 10 KEKFPPNYLSLPRKFGPVINVYLSCKPGNEKYTFGFVTFENADMVSLLLSKSTPHFIFGV 69
Query: 438 RVLVKPYKEKGKIVEKRQQQ 457
+V VK Y E K +++ Q
Sbjct: 70 KVRVKRYLEWTKQEQRKLPQ 89
>gi|242050692|ref|XP_002463090.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
gi|241926467|gb|EER99611.1| hypothetical protein SORBIDRAFT_02g037623 [Sorghum bicolor]
Length = 250
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 373 IYLTFPADSTFKDEDVSNYFSI---------FGPVQDVRIPYQQKRMFGFVTFVYPETVK 423
IY+ F STF +YF FGPV ++I M G+V+F+YPETVK
Sbjct: 166 IYIAFSRQSTFTVRGAWSYFRYCQFAISVRKFGPVTFLQI---LGAMRGWVSFLYPETVK 222
Query: 424 LILA--RGNPHFICDSRVLVKPYKEK 447
L+L+ R N H I + V + EK
Sbjct: 223 LLLSETRSNRHLILGAVVHIFSSMEK 248
>gi|240849025|ref|NP_001155653.1| nucleolar phosphoprotein-like [Acyrthosiphon pisum]
gi|239788809|dbj|BAH71066.1| ACYPI006149 [Acyrthosiphon pisum]
Length = 175
Score = 47.0 bits (110), Expect = 0.034, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 367 TSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETV 422
TS +R + F + ++ +YF+ FG V ++ IP +K R + FV F+YPE
Sbjct: 22 TSNDRGVVYLGHVPHGFYENEMKHYFAQFGEVTNINIPKSKKTGKARGYAFVEFLYPEVA 81
Query: 423 KLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHL 482
K++ N +++ ++LV Y E ++ + F R N + + P + +R
Sbjct: 82 KVVAETMN-NYLMHKKILVAKYLEPNQV---KSNTFWRCNKN--NIPLTIKNRS------ 129
Query: 483 GSKMFTQELMLRRKLEEQAELQQAIELQRRRLMNLQ 518
Q + R+L+ E Q L +RR+ +LQ
Sbjct: 130 -----IQRKAMDRQLDPAQEKQSKAAL-KRRIQSLQ 159
>gi|396475683|ref|XP_003839845.1| hypothetical protein LEMA_P112850.1 [Leptosphaeria maculans JN3]
gi|312216415|emb|CBX96366.1| hypothetical protein LEMA_P112850.1 [Leptosphaeria maculans JN3]
Length = 877
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 238 RPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNK 277
+PC +F RG CKNG SC++VHG G+ G + +P++
Sbjct: 794 QPCHFFQRGSCKNGASCRYVHGRVGEFGTMRDTAHSTPHR 833
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 348 GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ- 406
G G + N+ G K R++++ + T ++D+ YFS FG V DV I
Sbjct: 38 GDGNGQTNEVAQNGSDSKTNEDERKLFVGGISWDT-DNKDLREYFSKFGVVVDVNIKTDP 96
Query: 407 ---QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEK 447
+ R FGFVTF E ++ +L + PH + ++ KP K +
Sbjct: 97 TTGKSRGFGFVTFTAKEAIEAVL-KATPHTVKGKQIDPKPAKAR 139
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFVYPETVKLI 425
+S + D+ YF FGPV++V +P+ Q+R F FVTF ++V+L+
Sbjct: 151 ESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVELV 200
>gi|320583327|gb|EFW97542.1| Protein involved in pre-mRNA splicing, component of a complex
containing Cef1p [Ogataea parapolymorpha DL-1]
Length = 313
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 198 FSNWGQDLNNGGDVHLQHRRSFSASDACFGTED-----AGFNLGYRPCLYFARGFCKNGE 252
+S W NG V R A DA + D N CLYFARG+C NG+
Sbjct: 32 YSRWTGGEYNGRTVAHARHRCHPAKDAGYTKADKHVEPGSVNRDKFICLYFARGYCTNGK 91
Query: 253 SCKFVH 258
+C ++H
Sbjct: 92 NCDYLH 97
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLILARGNPHFIC 435
D D D YF+ FG V+D + Y +K R FGF+T+ P+ V+ +++ G H +
Sbjct: 183 DQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMS-GGTHELK 241
Query: 436 DSRVLVK 442
V VK
Sbjct: 242 GKSVEVK 248
>gi|226472210|emb|CAX77141.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 385 DEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETV-KLILARGNPHFICDSRV 439
+ED+S+YFS FG V D +I ++ R F FVTF + V K+ILAR PH I DS+
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKETNTSRGFAFVTFDDTDAVDKVILAR--PHTIKDSKA 174
Query: 440 LVK 442
V+
Sbjct: 175 DVR 177
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 11/188 (5%)
Query: 339 MLNDEFYKFGQGRA-ERNDFLAMGLAEKLTSA-NRQIYLTFPADSTFKDEDVSNYFSIFG 396
++ D + G RA ER +A+ L + + A +R I P + K+E FS FG
Sbjct: 14 LVKDGGAQSGSVRAGERRCLVAVELQQWGSGAMSRLIVKNLP--NGMKEERFRQLFSTFG 71
Query: 397 PVQDVRIPYQQK---RMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEK 453
+ D + + + R FGF+ F E + L N FI SR+ V+ K G +
Sbjct: 72 TLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNHFNKSFIDTSRITVEFCKSFGDPTKP 131
Query: 454 RQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEEQAELQQAIELQRRR 513
R S PS DS P G K EL KL+E E Q+ + + ++R
Sbjct: 132 RAWSKHAQKPSQSRQPSK-DSVPPETKKDGKKKVAGEL---EKLKEDTEFQEFLSVHQKR 187
Query: 514 LMNLQLPN 521
+ N
Sbjct: 188 VQAATWAN 195
>gi|414872916|tpg|DAA51473.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 499
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 438 RVLVKPYKEKGKI---VEKRQQQFERG-NMSPCSSPSG-VDSRDPYDLHL 482
R LVKPYKEKGK+ K Q G + C+SP+G +DSRDPY L L
Sbjct: 387 RALVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALLL 436
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 385 DEDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETV-KLILARGNPHFICDSRV 439
+ED+S+YFS FG V D +I + R F FVTF + V K+ILAR PH I DS+
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILAR--PHTIKDSKA 174
Query: 440 LVK 442
V+
Sbjct: 175 DVR 177
>gi|351710792|gb|EHB13711.1| E3 ubiquitin-protein ligase makorin-1 [Heterocephalus glaber]
Length = 403
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 240 CLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQ 299
C Y A G C++GESC ++H GD D+ G+ V P MD QH ++ AH++
Sbjct: 221 CTYAAMGECRSGESCVYLH---GDTCDLCGLQVLHP--MDTVQRSQH---IKSCIEAHEK 272
Query: 300 RLAASQFASGVSPPLPYDKCMDFLLRQQNDPQR 332
+ S FA S + D CM+ + + N +R
Sbjct: 273 DMELS-FAVQRSKDMACDICMEVVYEKANPSER 304
>gi|413956467|gb|AFW89116.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 359
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 438 RVLVKPYKEKGKI---VEKRQQQFERG-NMSPCSSPSG-VDSRDPYDLHL 482
R LVKPYKEKGK+ K Q G + C+SP+G +DSRDPY L L
Sbjct: 302 RALVKPYKEKGKVPGRFRKLQHAHHGGAEFAGCASPTGLLDSRDPYALLL 351
>gi|56758132|gb|AAW27206.1| SJCHGC06052 protein [Schistosoma japonicum]
gi|226472196|emb|CAX77134.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472198|emb|CAX77135.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472200|emb|CAX77136.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472202|emb|CAX77137.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472206|emb|CAX77139.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472208|emb|CAX77140.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472212|emb|CAX77142.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472214|emb|CAX77143.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472216|emb|CAX77144.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472220|emb|CAX77146.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472222|emb|CAX77147.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226473414|emb|CAX71392.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 385 DEDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETV-KLILARGNPHFICDSRV 439
+ED+S+YFS FG V D +I + R F FVTF + V K+ILAR PH I DS+
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILAR--PHTIKDSKA 174
Query: 440 LVK 442
V+
Sbjct: 175 DVR 177
>gi|226472204|emb|CAX77138.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 385 DEDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETV-KLILARGNPHFICDSRV 439
+ED+S+YFS FG V D +I + R F FVTF + V K+ILAR PH I DS+
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILAR--PHTIKDSKA 174
Query: 440 LVK 442
V+
Sbjct: 175 DVR 177
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 385 DEDVSNYFSIFGPVQDVRI----PYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRV 439
+E +++YF +G V D + Q+ R FGFVTF P++V +L+ G PH +CD +
Sbjct: 13 EESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSSG-PHVVCDREI 70
>gi|242793570|ref|XP_002482191.1| cell cycle control protein (Cwf2), putative [Talaromyces stipitatus
ATCC 10500]
gi|218718779|gb|EED18199.1| cell cycle control protein (Cwf2), putative [Talaromyces stipitatus
ATCC 10500]
Length = 420
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 207 NGGDVHLQHRRSFSASDACFGTEDAGFNL-----GYRPCLYFARGFCKNGESCKFVH 258
+GGD ++ +A+ C +D+G+ L G CL+FARG C G+ C+++H
Sbjct: 101 SGGDREDKYLSKTAAAGRCNVAKDSGYTLADKVAGSYFCLFFARGICPKGQECEYLH 157
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLILARGNPHFICDS 437
T DE+ YF ++GPV DV I Y Q R FGFV+F + V +L + H +
Sbjct: 120 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGK 178
Query: 438 RVLVK 442
+V VK
Sbjct: 179 QVEVK 183
>gi|348688403|gb|EGZ28217.1| hypothetical protein PHYSODRAFT_470556 [Phytophthora sojae]
Length = 753
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 236 GYRPCLYFARGFCKNGESCKFVH 258
G RPC +FARG C++GE+CKF H
Sbjct: 175 GQRPCRFFARGTCRDGENCKFSH 197
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLILARGNPHFICDS 437
T DE+ YF ++GPV DV I Y Q R FGFV+F + V +L + H +
Sbjct: 120 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHK-TFHDLSGK 178
Query: 438 RVLVK 442
+V VK
Sbjct: 179 QVEVK 183
>gi|254579717|ref|XP_002495844.1| ZYRO0C04290p [Zygosaccharomyces rouxii]
gi|238938735|emb|CAR26911.1| ZYRO0C04290p [Zygosaccharomyces rouxii]
Length = 598
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 231 AGFNLGYRPCLYFARGFCKNGESCKFVH 258
+GFN G PC YF +G C G SCKF H
Sbjct: 2 SGFNTGRTPCRYFQQGRCNKGNSCKFAH 29
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLILARGNPHFICDS 437
T DE+ YF ++GPV DV I Y Q R FGFV+F + V +L + H +
Sbjct: 115 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGK 173
Query: 438 RVLVK 442
+V VK
Sbjct: 174 QVEVK 178
>gi|357464611|ref|XP_003602587.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355491635|gb|AES72838.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1084
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 240 CLYFARGFCKNGESCKFVHGGFGDG-GDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQ 298
C+ FA+G C+ G SCKFVH DG G V+ MD F ++ DE +R A H+
Sbjct: 229 CINFAKGSCRMGASCKFVHDYDSDGYGKVS---------MDEFTRERDDEALRY-PATHE 278
Query: 299 QRLAASQFASGVSPPLPYDKCMDFLLRQQNDPQRAAAATLMLNDEFYKFGQ 349
R + SG S + +R++ D R AT D K G+
Sbjct: 279 SRDHS--LKSGRS---------NEFIREREDGARRYPATHESRDHSLKSGR 318
>gi|313233627|emb|CBY09798.1| unnamed protein product [Oikopleura dioica]
Length = 367
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 384 KDEDVSNYFSIFGPVQD---VRIPYQQK-RMFGFVTFVYPETVKLILARGNPHFICDSRV 439
+D D+ NYFS FG + D ++ P +QK R FGFV + PE + +L H I V
Sbjct: 291 EDTDLRNYFSTFGQLTDAMVIKCPEKQKSRGFGFVVYASPEDAETVLHHPAHHEINSKVV 350
Query: 440 LVK 442
VK
Sbjct: 351 DVK 353
>gi|357519923|ref|XP_003630250.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355524272|gb|AET04726.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 779
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 18/58 (31%)
Query: 209 GDVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGD 266
GD L +RRS A C+YFA+G C+ GESCK+VH DG D
Sbjct: 185 GDYSLTNRRSNEA------------------CIYFAKGRCRMGESCKYVHHDNSDGFD 224
>gi|255088323|ref|XP_002506084.1| predicted protein [Micromonas sp. RCC299]
gi|226521355|gb|ACO67342.1| predicted protein [Micromonas sp. RCC299]
Length = 567
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 231 AGFNLGYRPCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGS 274
AG G RPC Y+ G C+ G++C FVH G GG+ G G+
Sbjct: 353 AGGRQGTRPCRYWQLGKCRRGDACDFVHAGDA-GGNRAGASTGA 395
>gi|351713214|gb|EHB16133.1| E3 ubiquitin-protein ligase makorin-1 [Heterocephalus glaber]
Length = 376
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 240 CLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPNKMDGFYLQQHDEIMRMKAAAHQQ 299
C Y A G C++GESC ++H GD ++ G+ V P MD QH ++ AH++
Sbjct: 194 CTYAAMGECRSGESCVYLH---GDTCNLCGLQVLHP--MDTVQRSQH---IKSCIEAHEK 245
Query: 300 RLAASQFASGVSPPLPYDKCMDFLLRQQNDPQR 332
+ S FA S + D CM+ + + N +R
Sbjct: 246 DIELS-FAVQRSKDMACDICMEVVYEKANPSER 277
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFVYPETVKLI 425
+S + D+ YF FGPV++V +P+ Q+R F FVTF ++V+L+
Sbjct: 151 ESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVELV 200
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 348 GQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ- 406
G+ A+ N+ G K R++++ + T ++D+ YFS FG V DV I
Sbjct: 38 GEANAQTNEAAQNGSDAKTNEDERKLFVGGISWDT-DNKDLREYFSKFGVVVDVNIKTDP 96
Query: 407 ---QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEK 447
+ R FGFVTF + ++ +L + PH + ++ KP K +
Sbjct: 97 TTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPKPAKAR 139
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQQK---RMFGFVTFVYPETVKLILARGNPHFICDSRV 439
K+E + F+ FG V D + + + R FGFV F E LA+ N F+ SRV
Sbjct: 13 MKEERFKSMFAAFGTVTDCSLKFTKDGKFRKFGFVGFRSEEEANRALAQLNKSFVDTSRV 72
Query: 440 LVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKMFTQELMLRRKLEE 499
V+ K G K + + +SP PS + D +K + LEE
Sbjct: 73 TVEICKAFGDPT-KAKAWSKHSQVSPTDKPSTNLNPAHTDSKKKNKQKKETSSTLLNLEE 131
Query: 500 QAELQQAIELQRRRLMNLQLPNLKNHSVHHHQRSLSMGSPITSPACADVNQNVI 553
E ++ + + +RR Q P N +V Q S ++G + S DV+ + +
Sbjct: 132 DQEFKEFLSVHQRR---DQAPTWTNDTV---QTSAAVGIQLKSQCKKDVSDDYL 179
>gi|321257544|ref|XP_003193625.1| hypothetical protein CGB_D5090W [Cryptococcus gattii WM276]
gi|317460095|gb|ADV21838.1| Hypothetical protein CGB_D5090W [Cryptococcus gattii WM276]
Length = 746
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
Query: 216 RRSFSASDACFGTEDAGFNLG------YRPCLYFARGFCKNGESCKFVHGGFGDGGD--- 266
+ SFS+ G+ AG G PC +F++G C+NGE CKF H DG D
Sbjct: 392 KPSFSSGKPWTGSRPAGGKFGNWKDGNPPPCAFFSQGNCRNGEFCKFPHLD-ADGNDCRH 450
Query: 267 ---VNGVI 271
V GVI
Sbjct: 451 PDVVRGVI 458
>gi|294935581|ref|XP_002781457.1| heterogeneous nuclear ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
gi|239892153|gb|EER13252.1| heterogeneous nuclear ribonucleoprotein, putative [Perkinsus
marinus ATCC 50983]
Length = 489
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFVYPETVKLILARGNPHFIC 435
D+ K D+ +YFS FG V D + R FGF TF+ PE L R + H I
Sbjct: 411 DAKTKARDLLSYFSQFGDVIDCVVKSNTTTGSSRGFGFCTFISPEGYSNCLMRQSCHQIR 470
Query: 436 DSRVLVKPYKEKGKI 450
+ V+PY K I
Sbjct: 471 GRNISVQPYSRKRGI 485
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLILARGNPHFICDS 437
T ++++ YFS++G + + +I K R FGFVTF ++V+ I + G H +
Sbjct: 178 TLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGK 237
Query: 438 RVLVK 442
RV +K
Sbjct: 238 RVEIK 242
>gi|187607595|ref|NP_001120502.1| uncharacterized protein LOC100145628 [Xenopus (Silurana)
tropicalis]
gi|170284827|gb|AAI61391.1| LOC100145628 protein [Xenopus (Silurana) tropicalis]
Length = 1053
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 200 NWGQDLNNGGDVHLQHRRS---FSASDACFGTEDAGFNLGYRPC-LYFARGFCKNGESCK 255
WG+ N DV + RR F S C E+ F PC LY G C NGE C
Sbjct: 57 TWGEHCNFSHDVEVPRRRGLCKFYVSGYCARAENCPFMHNDFPCKLYHTTGNCINGEDCM 116
Query: 256 FVHGGFGD 263
F H D
Sbjct: 117 FSHEPLTD 124
>gi|167534320|ref|XP_001748838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772800|gb|EDQ86448.1| predicted protein [Monosiga brevicollis MX1]
Length = 514
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQ---QKRMFGFVTFVYPETVKLILARGNPHFICDSRV 439
+D D+S F +FGPV V IP R F FV F PE LA GN + +V
Sbjct: 300 VQDSDLSEAFGVFGPVSRVTIPRSANGDTRGFAFVVFENPEDRAHALAAGNMLEVGGGKV 359
Query: 440 LVKPYKEKGKI 450
Y+ K ++
Sbjct: 360 QYSAYRTKEEL 370
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 42.0 bits (97), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFVYPETVKLI 425
+S + D+ YF ++GPV++V +P+ Q+R F FVTF ++V L+
Sbjct: 122 ESDMPEADIKAYFEMYGPVENVELPFDKAKIQRRQFAFVTFEREDSVDLV 171
Score = 41.2 bits (95), Expect = 1.8, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 343 EFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVR 402
++ + G+G + N+ G K R++++ + T ++D+ YFS FG V DV
Sbjct: 4 QYQQEGEGNGQTNEAAQNGSDGKTNEDERKLFVGGISWDT-DNKDLREYFSKFGVVVDVN 62
Query: 403 IPYQ----QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKI 450
I + R FGFVTF + ++ +L + PH + ++ KP K + I
Sbjct: 63 IKTDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPKPAKARPGI 113
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 343 EFYKFGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVR 402
++ + G+G + N+ G K R++++ + T ++D+ YFS FG V DV
Sbjct: 4 QYQQEGEGNGQTNEATQNGSDGKTNEDERKLFVGGISWDT-DNKDLREYFSKFGVVVDVN 62
Query: 403 IPYQ----QKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEK 447
I + R FGFVTF + ++ +L + PH + ++ KP K +
Sbjct: 63 IKTDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPKPAKAR 110
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFVYPETVKLI 425
+S + D+ YF FGPV++V +P+ Q+R F FVTF ++V L+
Sbjct: 122 ESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVDLV 171
>gi|195540171|gb|AAI68044.1| LOC100145628 protein [Xenopus (Silurana) tropicalis]
Length = 1365
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 201 WGQDLNNGGDVHLQHRRS---FSASDACFGTEDAGFNLGYRPC-LYFARGFCKNGESCKF 256
WG+ N DV + RR F S C E+ F PC LY G C NGE C F
Sbjct: 370 WGEHCNFSHDVEVPRRRGLCKFYVSGYCARAENCPFMHNDFPCKLYHTTGNCINGEDCMF 429
Query: 257 VHGGFGD 263
H D
Sbjct: 430 SHEPLTD 436
>gi|50557194|ref|XP_506005.1| YALI0F29073p [Yarrowia lipolytica]
gi|73918961|sp|Q6C007.1|CWC2_YARLI RecName: Full=Pre-mRNA-splicing factor CWC2
gi|49651875|emb|CAG78817.1| YALI0F29073p [Yarrowia lipolytica CLIB122]
Length = 382
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 198 FSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNL-----GYRPCLYFARGFCKNGE 252
F+ W +GGD + A C D+G+ G CLYFARG C G
Sbjct: 87 FNKW-----SGGDKEDEKFNQKKADGRCSIARDSGYTRADKVPGSYFCLYFARGLCTQGH 141
Query: 253 SCKFVH 258
C+F+H
Sbjct: 142 KCEFLH 147
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 365 KLTSANRQIYLT-FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYP 419
K S R+I++ P +++++ NYF ++G + + +I Y R FGFVTF
Sbjct: 151 KAVSKTRKIFVGGLPP--LLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTE 208
Query: 420 ETVKLILARGNPHFICDSRVLVK 442
++V + + G H + D +V +K
Sbjct: 209 DSVDRLFSDGKVHELGDKQVEIK 231
>gi|212535620|ref|XP_002147966.1| cell cycle control protein (Cwf2), putative [Talaromyces marneffei
ATCC 18224]
gi|210070365|gb|EEA24455.1| cell cycle control protein (Cwf2), putative [Talaromyces marneffei
ATCC 18224]
Length = 423
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 207 NGGDVHLQHRRSFSASDACFGTEDAGFN-----LGYRPCLYFARGFCKNGESCKFVH 258
+GGD ++ +A+ C +D+G+ G CL+FARG C G+ C+++H
Sbjct: 104 SGGDREDKYLSKTAAAGRCNVAKDSGYTRADKVAGSYFCLFFARGICPKGQECEYLH 160
>gi|307006509|gb|ADN23539.1| RNA-binding protein musashi subunit HRP1 [Hyalomma marginatum
rufipes]
Length = 208
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFVYPETVKLI 425
+S + D+ YF FGPV++V +P+ Q+R F FVTF ++V+L+
Sbjct: 4 ESDMPEADIKAYFEKFGPVENVELPFDKARNQRRQFTFVTFEREDSVELV 53
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST + D NYF FG + DV + Y Q+ R FGF+TF E V
Sbjct: 116 STVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVD------------- 162
Query: 437 SRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSPSG 471
+VL++ + E GK+VE ++ + + P SP G
Sbjct: 163 -KVLMRTFHELNGKMVEVKRAVPKELSPGPSRSPLG 197
>gi|357482897|ref|XP_003611735.1| RNA-binding protein [Medicago truncatula]
gi|355513070|gb|AES94693.1| RNA-binding protein [Medicago truncatula]
Length = 403
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRM----FGFVTFVYPETVKLILARGNPHFICDSRVLV 441
ED+ YF FG ++DV IP KR FGFVTF + R PH IC V +
Sbjct: 245 EDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLR--PHEICGHEVAI 302
>gi|357616936|gb|EHJ70495.1| hypothetical protein KGM_10405 [Danaus plexippus]
Length = 441
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
+D+ +YFS FG V DV +P + R FGFVTF+ PE + + G H I + V V
Sbjct: 218 DDLRDYFSRFGEVTDVFVP-RPFRAFGFVTFLDPEVAQSLC--GEDHVIKGASVSV 270
>gi|301117436|ref|XP_002906446.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107795|gb|EEY65847.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 726
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 236 GYRPCLYFARGFCKNGESCKFVHG-----GFGDGGDVNG 269
G RPC +F RG C++GE CKF H DG D G
Sbjct: 171 GQRPCRFFVRGNCRDGEKCKFSHAKKEVVSERDGSDAPG 209
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 383 FKDEDVSNYFSIFGPVQD---VRIPYQQK-RMFGFVTFVYPETVKLILARGNPHFICDSR 438
F + + +YFS FG +++ +R P ++ R FGFVTF P +V +L G PH DS+
Sbjct: 77 FSFDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL--GQPHHELDSK 134
Query: 439 VL----VKPYKEKGKIVEKRQQQFERG 461
+ P + + K+V + ++ F G
Sbjct: 135 TIDPKVAFPRRAQPKMVTRTKKIFVGG 161
>gi|328723850|ref|XP_003247957.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Acyrthosiphon
pisum]
gi|328723852|ref|XP_003247958.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Acyrthosiphon
pisum]
Length = 392
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ YFS FG V +V +P R F FVTF+ PE + G H + D V V
Sbjct: 206 DDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPEVAASLC--GEDHIVKDVSVRVSEAA 263
Query: 446 EKGKIVEKRQQ 456
K + + R Q
Sbjct: 264 PKPQAPKNRHQ 274
>gi|328723854|ref|XP_001948745.2| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Acyrthosiphon
pisum]
Length = 377
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ YFS FG V +V +P R F FVTF+ PE + G H + D V V
Sbjct: 191 DDIREYFSKFGEVINVFVPKNPFRGFAFVTFLDPEVAASLC--GEDHIVKDVSVRVSEAA 248
Query: 446 EKGKIVEKRQQ 456
K + + R Q
Sbjct: 249 PKPQAPKNRHQ 259
>gi|85000983|ref|XP_955210.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303356|emb|CAI75734.1| RNA-binding protein, putative [Theileria annulata]
Length = 406
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 364 EKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQ-----KRMFGFVTFVY 418
EK+ +ANR I++T A KD D+ +YF FG V D P Q + FGF++F
Sbjct: 107 EKI-NANR-IFITRIAFEATKD-DLEDYFKKFGTVYDAYCPKQNNYSGLNKGFGFISFEN 163
Query: 419 PETVKLILARGNPHFICDSRVLV 441
E++K + G PH I V+V
Sbjct: 164 EESIKKVFETG-PHVIMGREVIV 185
>gi|156361860|ref|XP_001625502.1| predicted protein [Nematostella vectensis]
gi|156212338|gb|EDO33402.1| predicted protein [Nematostella vectensis]
Length = 126
Score = 40.8 bits (94), Expect = 2.3, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRI----PYQQKRMFGFVTFVYPETVKLIL 426
R+I++ A ST K E + YF FG V D + ++ R FGFVTF P T++ +L
Sbjct: 14 RKIFVGGLATSTTK-EGLHQYFENFGEVTDCVLMTDPTTKRSRGFGFVTFRDPATIESVL 72
Query: 427 ARGNPHFICDSRVLVKPYK 445
A+ PH + + KP +
Sbjct: 73 AK-KPHILDGKTIDPKPAR 90
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
T + ED+ F FGP++DV +P ++ R FGFV F +PE N IC
Sbjct: 66 TARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRHPEDAAYAKQEMNHQVICGR 125
Query: 438 RVLV 441
+ +
Sbjct: 126 EITI 129
>gi|169611751|ref|XP_001799293.1| hypothetical protein SNOG_08990 [Phaeosphaeria nodorum SN15]
gi|160702359|gb|EAT83182.2| hypothetical protein SNOG_08990 [Phaeosphaeria nodorum SN15]
Length = 492
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 182 LDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRP-- 239
+D ++ D P N + +GGD ++ +A C +D+G+ R
Sbjct: 55 VDPATFKTDAPPPTGTIFNIWYNKWSGGDREDKYLSKTAAQGRCNVAKDSGYTKADRTPG 114
Query: 240 ---CLYFARGFCKNGESCKFVH 258
CL+FARG C G C+++H
Sbjct: 115 SYFCLFFARGICPKGVDCEYLH 136
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
+T ++ YF FG V D + + ++ R FGF+TF E+V + ARG I D
Sbjct: 111 ATVDEDTFRAYFEEFGLVDDAVVMFDHENKRPRGFGFITFADEESVDAVFARGTIQTIHD 170
Query: 437 SRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLG 483
++ +K + R +M P SP + R P H G
Sbjct: 171 KQIEIK-------------RAVPRDSMPP--SPRALQHRSPMAHHPG 202
>gi|145347002|ref|XP_001417969.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578197|gb|ABO96262.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 367 TSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDV---RIPY-QQKRMFGFVTFVYPETV 422
SA +I++ D T + V N+FS FGPV +V R P+ Q R FGF+TF ++
Sbjct: 9 ASAGSKIFVGG-LDRTVDEGVVRNFFSQFGPVMEVLVMRDPHNHQSRGFGFITFQRDDSA 67
Query: 423 KLILARGNPHFICDSRVLVK 442
K +L + H + RV VK
Sbjct: 68 KQVL-QNRYHDMLGKRVEVK 86
>gi|412985286|emb|CCO20311.1| predicted protein [Bathycoccus prasinos]
Length = 306
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 239 PCLYFARGFCKNGESCKFVHGGFGDGGDVNGVI 271
PC++ ARG CKNG++CK+ H +G D G I
Sbjct: 271 PCIFLARGSCKNGDACKYSHTLMAEGDDDMGDI 303
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 386 EDVSNYFSIFGPVQDVRI----PYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRV-- 439
E + YFS FG + +V + ++ R FGFVTF P +V+ +LA G PH + ++
Sbjct: 36 EGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEKVLANG-PHELDGKKIDP 94
Query: 440 -LVKPYKEKGKIVEKRQQQFERGNMSPCS 467
+ P + K+V + ++ F G +P +
Sbjct: 95 KIAFPKRAHPKMVTRTKKVFVGGLSAPTT 123
>gi|405120245|gb|AFR95016.1| hypothetical protein CNAG_01130 [Cryptococcus neoformans var.
grubii H99]
Length = 746
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 216 RRSFSASDACFGTEDAGFNLG------YRPCLYFARGFCKNGESCKFVH 258
+ SFS G AG G PC +F++G C+NGE CKF H
Sbjct: 392 KPSFSGGKPWTGNRPAGGKFGNWKDGNPPPCAFFSQGNCRNGEFCKFPH 440
>gi|195347229|ref|XP_002040156.1| GM15502 [Drosophila sechellia]
gi|195586189|ref|XP_002082860.1| GD25005 [Drosophila simulans]
gi|194135505|gb|EDW57021.1| GM15502 [Drosophila sechellia]
gi|194194869|gb|EDX08445.1| GD25005 [Drosophila simulans]
Length = 531
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHL 482
K + + R QQ + N + +S G+ S P H+
Sbjct: 263 PKAE--QNRNQQVQSYNYNSANS-FGMHSYHPQGNHM 296
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
T + ED+ F FGP++DV +P ++ R FGFV F YPE + R H +
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDA-AVAKREMHHQVIGG 125
Query: 438 RVLVKPYKEKGK 449
R + Y E+ +
Sbjct: 126 REISIVYAEENR 137
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLIL 426
R+I++ A ST + + NYF FG + DV + Y R FGF+T+ E V+
Sbjct: 106 RKIFVGGLA-STVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVE--- 161
Query: 427 ARGNPHFICDSRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSPSG 471
+VL+K + E GK+VE ++ + + P SP G
Sbjct: 162 -----------KVLIKTFHELNGKMVEVKRAVPKELSPGPSRSPLG 196
>gi|196000456|ref|XP_002110096.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
gi|190588220|gb|EDV28262.1| hypothetical protein TRIADDRAFT_53710 [Trichoplax adhaerens]
Length = 317
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQQK--RMFGFVTFVYPETVK 423
++D D+ N F FG ++DV I + ++ + FGFVTF+ PE K
Sbjct: 140 YRDGDLRNMFERFGNIEDVEIIFNERGSKGFGFVTFINPEDAK 182
>gi|3882096|dbj|BAA34421.1| TAR-binding protein [Drosophila melanogaster]
gi|3882126|dbj|BAA34428.1| TAR-binding protein [Drosophila melanogaster]
gi|3882128|dbj|BAA34429.1| TAR-binding protein [Drosophila melanogaster]
Length = 531
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHL 482
K + + R QQ + N + +S G+ S P H+
Sbjct: 263 PKAE--QNRNQQVQSYNYNSANS-FGMHSYHPQGNHM 296
>gi|58266190|ref|XP_570251.1| hypothetical protein CND02530 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134111020|ref|XP_775974.1| hypothetical protein CNBD3810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258640|gb|EAL21327.1| hypothetical protein CNBD3810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226484|gb|AAW42944.1| hypothetical protein CND02530 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 749
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 216 RRSFSASDACFGTEDAGFNLG------YRPCLYFARGFCKNGESCKFVH 258
+ SFS G AG G PC +F++G C+NGE CKF H
Sbjct: 397 KPSFSGGKPWTGNRPAGGKFGNWKDGNPPPCAFFSQGNCRNGEFCKFPH 445
>gi|17137616|ref|NP_477400.1| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|19549788|ref|NP_599145.1| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|24762415|ref|NP_726373.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|281364145|ref|NP_001163280.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|281364147|ref|NP_001163281.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
gi|19528241|gb|AAL90235.1| GH09868p [Drosophila melanogaster]
gi|21626670|gb|AAF47079.2| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|21626671|gb|AAF47078.2| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|21626672|gb|AAM68274.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|63108407|gb|AAY33499.1| RH39704p [Drosophila melanogaster]
gi|220946666|gb|ACL85876.1| TBPH-PB [synthetic construct]
gi|220956308|gb|ACL90697.1| TBPH-PB [synthetic construct]
gi|272432674|gb|ACZ94552.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|272432675|gb|ACZ94553.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
Length = 531
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHL 482
K + + R QQ + N + +S G+ S P H+
Sbjct: 263 PKAE--QNRNQQVQSYNYNSANS-FGMHSYHPQGNHM 296
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST + D YF FG + DV + Y Q+ R FGF+T+ E V+
Sbjct: 115 STVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVE------------- 161
Query: 437 SRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSP 469
RVL K + E GK+VE ++ + + P SP
Sbjct: 162 -RVLHKTFHELNGKMVEVKRAVPKEHSPGPSRSP 194
>gi|71004490|ref|XP_756911.1| hypothetical protein UM00764.1 [Ustilago maydis 521]
gi|46095903|gb|EAK81136.1| hypothetical protein UM00764.1 [Ustilago maydis 521]
Length = 979
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 212 HLQHRRSFSASDACFGTE-DAGFNLGYRP-CLYFARGFCKNGESCKFVHGGFGDGGDVNG 269
H RR ++ FG+ D RP C +FAR CK+GE C+F H DG D+ G
Sbjct: 397 HKGARRGGASMSGSFGSRADFSKRSTERPACHFFARSACKHGEDCRFPH-ILPDGTDMRG 455
Query: 270 VIVGSPN 276
G P+
Sbjct: 456 PNAGRPS 462
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
T + ED+ F FGP++DV +P ++ R FGFV F YPE + R H +
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDA-AVAKREMHHQVIGG 125
Query: 438 RVLVKPYKEKGK 449
R + Y E+ +
Sbjct: 126 REISIVYAEENR 137
>gi|289741549|gb|ADD19522.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 531
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ +YFS FG V DV IP + R F FVTF+ PE + + G H I V V
Sbjct: 206 DDLKDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGISVHVSNAA 262
Query: 446 EKGK 449
KG+
Sbjct: 263 PKGE 266
>gi|294937440|ref|XP_002782069.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
gi|239893400|gb|EER13864.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
Length = 408
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
+++ +YFS FG ++D + + R FGF+TF++P+ ++ L + +PH + D + V
Sbjct: 67 QELKDYFSQFGEIEDSIVMMDRVTGRSRGFGFITFLHPQDMEACLDK-SPHVVMDKTIDV 125
Query: 442 KPYKEKG 448
K E G
Sbjct: 126 KRAVEGG 132
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 19/94 (20%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST + D YF FG + DV + Y Q+ R FGF+T+ E V
Sbjct: 115 STITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVD------------- 161
Query: 437 SRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSP 469
RVL K + E GK+VE ++ + + P SP
Sbjct: 162 -RVLYKTFHELNGKMVEVKRAVPKELSPGPTRSP 194
>gi|217074298|gb|ACJ85509.1| unknown [Medicago truncatula]
gi|388503058|gb|AFK39595.1| unknown [Medicago truncatula]
Length = 397
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRM----FGFVTFVYPETVKLILARGNPHFICDSRVLV 441
ED+ YF FG ++DV IP KR FGFVTF + R PH IC V +
Sbjct: 239 EDLRQYFGRFGRIEDVCIPRDPKRTGHRGFGFVTFADEGVADRVSLR--PHEICGHEVAI 296
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST + D YF FG + DV + Y Q+ R FGF+T+ E V+
Sbjct: 115 STVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVE------------- 161
Query: 437 SRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSP 469
RVL K + E GK+VE ++ + + P SP
Sbjct: 162 -RVLHKTFHELNGKMVEVKRAVPKEHSPGPSRSP 194
>gi|320592591|gb|EFX05021.1| hypothetical protein CMQ_5283 [Grosmannia clavigera kw1407]
Length = 740
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 239 PCLYFARGFCKNGESCKFVHGGFGDGGD 266
PC +FARG C+NG +C+F H DG D
Sbjct: 93 PCHFFARGRCRNGATCRFSHNQAEDGED 120
>gi|332322173|emb|CCA66179.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 684
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 387 DVSNYFSIFGPVQDVRIPYQQK---RMFGFVTFVYPETVKLILARGNPHFICDSRVLVKP 443
D++ F G + ++ IP Q ++ FV F YP+++ + N I SR+ V P
Sbjct: 49 DLAKIFRTHGAINNIHIPESQTNPNHLYAFVQFAYPQSLATAIRDENGRLIGKSRITVFP 108
Query: 444 YKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHLGSKM 486
K +KRQ N + SS S +++P L KM
Sbjct: 109 AK-----YDKRQPPPRHQNTT--SSHSRRQNKNPLHLRSAPKM 144
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 365 KLTSANRQIYLT-FPADSTFKDEDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFVYP 419
K S R+I++ P +++++ NYF ++G + + +I Y + R FGFVTF
Sbjct: 174 KAVSKTRKIFVGGLPP--LLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTE 231
Query: 420 ETVKLILARGNPHFICDSRVLVK 442
++V + + G H + D +V +K
Sbjct: 232 DSVDRLFSDGKVHELGDKQVEIK 254
>gi|380018349|ref|XP_003693093.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Apis florea]
Length = 226
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 383 FKDEDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETVKLILARGNPHFICDSR 438
F +E +++YF FG V VR+ + R +G+V F+YPE K+ N + +C R
Sbjct: 85 FYEEQMTDYFKQFGNVTRVRVVRSKNTGRSRGYGYVEFMYPEVAKIAAETMNNYLMC-GR 143
Query: 439 VLVKPY 444
+L Y
Sbjct: 144 LLKATY 149
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 19/94 (20%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST + D YF FG + DV + Y Q+ R FGF+T+ E V
Sbjct: 115 STITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD------------- 161
Query: 437 SRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSP 469
RVL K + E GK+VE ++ + + P SP
Sbjct: 162 -RVLYKTFHELNGKMVEVKRAVPKELSPGPTRSP 194
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 318 KCMDFLLRQQNDPQRAAAA------TLMLNDEFYKFG--QGRAERNDFLAMGLA------ 363
+C F+ Q +P AAAA T + ND G Q +AER L +
Sbjct: 254 RCFGFVNFQ--NPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISR 311
Query: 364 -EKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ---QKRMFGFVTFVYP 419
EKL AN +YL D +F DE + + FS FG + ++ + + GFV+F P
Sbjct: 312 YEKLQGAN--LYLK-NLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTP 368
Query: 420 ETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFER----GNMSPCSSPSGVDSR 475
E L N I + V + K + Q QF + G M+P P+G+
Sbjct: 369 EEASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAPL--PAGIPLY 426
Query: 476 DP 477
P
Sbjct: 427 HP 428
>gi|198437172|ref|XP_002122781.1| PREDICTED: similar to musashi 2 [Ciona intestinalis]
Length = 386
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 343 EFYKFGQGRAERNDF-LAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDV 401
+F FG+ AER+ + G ++ + ++I++ + +T D D+ NYF +G V+D
Sbjct: 53 DFNDFGKSIAERSSLGVLAGKPAQMVTRTKKIFVGGLSANTVVD-DLKNYFGTYGKVEDA 111
Query: 402 RIPYQQK----RMFGFVTF 416
+ + ++ R FGFVTF
Sbjct: 112 MLMFDKQTNRHRGFGFVTF 130
>gi|307199474|gb|EFN80087.1| TAR DNA-binding protein 43 [Harpegnathos saltator]
Length = 467
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ +YFS FG V DV IP + R F FVTF+ PE + + G H I V V
Sbjct: 206 DDLRDYFSKFGEVTDVFIP-KPFRAFSFVTFLDPEVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDS 474
K + K NM +P VD+
Sbjct: 263 PKSEGNNKNFNNQVNSNMRGRGAPGPVDN 291
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
T + ED+ F FGP++DV +P ++ R FGFV F YPE + R H +
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDA-AVAKREMHHQVIGG 125
Query: 438 RVLVKPYKEKGK 449
R + Y E+ +
Sbjct: 126 REISIVYAEENR 137
>gi|218197033|gb|EEC79460.1| hypothetical protein OsI_20470 [Oryza sativa Indica Group]
Length = 625
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 207 NGGDVHLQHRRSFSASDACFGTEDAGFNLG----YRPCLYFARGFCKNGESCKFVHGGFG 262
+GG V S + S FG+ G ++ R C ++A+G CKNG+SC F+H G
Sbjct: 67 HGGHVSQSPPDSNALSSQRFGSSSPGGDMKNKTRKRTCTFYAQGRCKNGKSCTFLHEGEV 126
Query: 263 DGGD 266
G D
Sbjct: 127 SGSD 130
>gi|145354810|ref|XP_001421668.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581906|gb|ABO99961.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 299
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 239 PCLYFARGFCKNGESCKFVHGGFGDG 264
PC++F RG C+ G+SCK+ H G G G
Sbjct: 264 PCIFFQRGACRAGDSCKYSHSGEGSG 289
>gi|213402063|ref|XP_002171804.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
gi|211999851|gb|EEB05511.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
Length = 171
Score = 40.0 bits (92), Expect = 4.0, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 181 FLDESSKNEDFTDPRSQFSNWGQDLNNGGDVHLQHRRSFSAS-DACFGTEDAGFNLGYRP 239
F+ E + DFT R +F ++ + H+ +SA DA + G +G
Sbjct: 4 FIKEKAIAADFTPVRFKFDDY---------LERHHQFDYSARYDAHQNARENGSKMGSVV 54
Query: 240 CLYFARGFCKNGESCKFVH 258
C ++ RG CK G C+F+H
Sbjct: 55 CKHWLRGLCKKGNQCEFLH 73
>gi|75226408|sp|Q75K81.1|C3H36_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 36;
Short=OsC3H36
gi|46981267|gb|AAT07585.1| unknown protein [Oryza sativa Japonica Group]
gi|48475209|gb|AAT44278.1| unknown protein [Oryza sativa Japonica Group]
gi|222632097|gb|EEE64229.1| hypothetical protein OsJ_19062 [Oryza sativa Japonica Group]
Length = 703
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 207 NGGDVHLQHRRSFSASDACFGTEDAGFNLG----YRPCLYFARGFCKNGESCKFVHGGFG 262
+GG V S + S FG+ G ++ R C ++A+G CKNG+SC F+H G
Sbjct: 145 HGGHVSQSPPDSNALSSQRFGSSSPGGDMKNKTRKRTCTFYAQGRCKNGKSCTFLHEGEV 204
Query: 263 DGGD 266
G D
Sbjct: 205 SGSD 208
>gi|297738926|emb|CBI28171.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 239 PCLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVG-SPNKMD 279
PC ++ GFC GE C F+HG G + ++G PN ++
Sbjct: 90 PCYFYYNGFCNKGERCSFLHGPDSTGTETGPTLIGRRPNSVE 131
>gi|195382465|ref|XP_002049950.1| GJ21868 [Drosophila virilis]
gi|194144747|gb|EDW61143.1| GJ21868 [Drosophila virilis]
Length = 539
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVK--- 442
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 443 PYKEKGKIVEKRQQQFERGN 462
P E+ + + + + GN
Sbjct: 263 PKAEQNRTHQGQNYNYNSGN 282
>gi|389610037|dbj|BAM18630.1| heterogeneous nuclear ribonucleoprotein 27c [Papilio xuthus]
Length = 318
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
+D+ YFS FG V DV +P + R FGFVTF+ PE + + G H I + V V
Sbjct: 219 DDLREYFSSFGEVTDVFVP-RPFRAFGFVTFLDPEVAQSLC--GEDHVIKGASVSV 271
>gi|388511807|gb|AFK43965.1| unknown [Lotus japonicus]
Length = 191
Score = 40.0 bits (92), Expect = 4.3, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 361 GLAEKLTSANRQIYLT-FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRM----FGFVT 415
G E ++I++ P ++T ED+ YF FG + DV IP KR FGFVT
Sbjct: 45 GRGEPAREVGKKIFVGHLPQEAT--TEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVT 102
Query: 416 FVYPETVKLILARGNPHFICDSRVLV 441
F + R PH IC +V +
Sbjct: 103 FAEDGVADRVARR--PHEICGHQVAI 126
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 16/92 (17%)
Query: 378 PADSTFKDEDVSNYFSIFGPVQD---VRIPYQQK-RMFGFVTFVYPETVKLILARGNPHF 433
PADS + +YFS FG +++ +R P ++ R FGFVTF P +V +L G PH
Sbjct: 150 PADS------LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL--GQPHH 201
Query: 434 ICDSRVL----VKPYKEKGKIVEKRQQQFERG 461
DS+ + P + + K+V + ++ F G
Sbjct: 202 ELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGG 233
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
S+ +E+ NYF FG + DV + Y Q+ R FGF+TF + V
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVD------------- 165
Query: 437 SRVLVKPYKE-KGKIVE-KRQQQFERGNMSPCSSP--SGVD 473
RVL K + E GK+VE KR E +S SP SGV+
Sbjct: 166 -RVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVN 205
>gi|388511899|gb|AFK44011.1| unknown [Lotus japonicus]
Length = 220
Score = 40.0 bits (92), Expect = 4.5, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 361 GLAEKLTSANRQIYLT-FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKRM----FGFVT 415
G E ++I++ P ++T ED+ YF FG + DV IP KR FGFVT
Sbjct: 74 GRGEPAREVGKKIFVGHLPQEAT--TEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVT 131
Query: 416 FVYPETVKLILARGNPHFICDSRVLV 441
F + R PH IC +V +
Sbjct: 132 FAEDGVADRVARR--PHEICGHQVAI 155
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
S+ +E+ NYF FG + DV + Y Q+ R FGF+TF + V
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVD------------- 165
Query: 437 SRVLVKPYKE-KGKIVE-KRQQQFERGNMSPCSSP--SGVD 473
RVL K + E GK+VE KR E +S SP SGV+
Sbjct: 166 -RVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVN 205
>gi|413919657|gb|AFW59589.1| hypothetical protein ZEAMMB73_140082 [Zea mays]
Length = 293
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 373 IYLTFPADSTFKDEDVSNYF 392
IYL FPADST+ +EDVSNYF
Sbjct: 255 IYLMFPADSTYSEEDVSNYF 274
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
S+ +E+ NYF FG + DV + Y Q+ R FGF+TF + V
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVD------------- 165
Query: 437 SRVLVKPYKE-KGKIVE-KRQQQFERGNMSPCSSP--SGVD 473
RVL K + E GK+VE KR E +S SP SGV+
Sbjct: 166 -RVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVN 205
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLIL 426
R+I++ A ST + D YF FG + DV + Y Q+ R FGF+T+ E V
Sbjct: 106 RKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD--- 161
Query: 427 ARGNPHFICDSRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSPSG 471
+VL+K + E GK+VE ++ + + P +P G
Sbjct: 162 -----------KVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLG 196
>gi|194885691|ref|XP_001976478.1| GG19989 [Drosophila erecta]
gi|190659665|gb|EDV56878.1| GG19989 [Drosophila erecta]
Length = 533
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHL 482
K + + R QQ + N + +S G+ S P H+
Sbjct: 263 PKAE--QNRNQQAQSYNYNSANS-FGMHSYHPQGNHM 296
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 318 KCMDFLLRQQNDPQRAAAA------TLMLNDEFYKFG--QGRAERNDFLAMGLA------ 363
+C F+ Q +P AAAA T + ND G Q +AER L +
Sbjct: 254 RCFGFVNFQ--NPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISR 311
Query: 364 -EKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ---QKRMFGFVTFVYP 419
EKL AN +YL D +F DE + + FS FG + ++ + + GFV+F P
Sbjct: 312 YEKLQGAN--LYLK-NLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTP 368
Query: 420 ETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFER----GNMSPCSSPSGVDSR 475
E L N I + V + K + Q QF + G M+P P+G+
Sbjct: 369 EEASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAPL--PAGIPLY 426
Query: 476 DP 477
P
Sbjct: 427 HP 428
>gi|154311423|ref|XP_001555041.1| hypothetical protein BC1G_06564 [Botryotinia fuckeliana B05.10]
Length = 393
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 198 FSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFN-----LGYRPCLYFARGFCKNGE 252
++ W +GGD ++ +A+ C D G+ G CL+FARG C G+
Sbjct: 77 YNKW-----SGGDREDKYLSKTAAAGRCNIANDTGYTKADKVTGSYFCLFFARGICPKGQ 131
Query: 253 SCKFVH 258
C+++H
Sbjct: 132 ECEYLH 137
>gi|195489341|ref|XP_002092695.1| GE11522 [Drosophila yakuba]
gi|194178796|gb|EDW92407.1| GE11522 [Drosophila yakuba]
Length = 534
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 446 EKGKIVEKRQQQFERGNMSPCSSPSGVDSRDPYDLHL 482
K + + R QQ + N + +S G+ S P H+
Sbjct: 263 PKAE--QNRNQQAQSYNYNSANS-FGMHSYHPQGNHM 296
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 19/94 (20%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST + D YF FG + DV + Y Q+ R FGF+T+ E V
Sbjct: 149 STITESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD------------- 195
Query: 437 SRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSP 469
RVL K + E GK+VE ++ + + P SP
Sbjct: 196 -RVLYKTFHELNGKMVEVKRAVPKELSPGPSRSP 228
>gi|347829182|emb|CCD44879.1| similar to pre-mRNA splicing factor cwc2 [Botryotinia fuckeliana]
Length = 393
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 198 FSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFN-----LGYRPCLYFARGFCKNGE 252
++ W +GGD ++ +A+ C D G+ G CL+FARG C G+
Sbjct: 77 YNKW-----SGGDREDKYLSKTAAAGRCNIANDTGYTKADKVTGSYFCLFFARGICPKGQ 131
Query: 253 SCKFVH 258
C+++H
Sbjct: 132 ECEYLH 137
>gi|206597186|dbj|BAG71500.1| musashi [Gryllus bimaculatus]
Length = 118
Score = 39.7 bits (91), Expect = 4.9, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 386 EDVSNYFSIFGPVQDVRI---PYQQK-RMFGFVTFVYPETVKLIL 426
E + YF +FG V DV I P Q+ R FGF+TF PETV+ +L
Sbjct: 11 EKLKEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFSDPETVEKVL 55
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRI---PYQQKRMFGFVTFVYPETVKLILARGNPHFICD 436
D + DE +S FS FG V +I P R GFV F PE LA N +
Sbjct: 314 DDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAG 373
Query: 437 SRVLVKPYKEKGKIVEKRQQQFER---GNMSPCSS-----PSGV 472
+ V P ++K + + Q QF + M+P + P+GV
Sbjct: 374 KPLYVAPAQKKEERKARLQAQFSQVRPVTMAPIAPRLPFYPAGV 417
>gi|195122786|ref|XP_002005892.1| GI20724 [Drosophila mojavensis]
gi|193910960|gb|EDW09827.1| GI20724 [Drosophila mojavensis]
Length = 536
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVK--- 442
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 443 PYKEKGKIVEKRQQQFERGN 462
P E+ + + + + GN
Sbjct: 263 PKAEQNRTHQGQNYNYNSGN 282
>gi|428182299|gb|EKX51160.1| hypothetical protein GUITHDRAFT_66239, partial [Guillardia theta
CCMP2712]
Length = 184
Score = 39.7 bits (91), Expect = 5.0, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETVKLILAR---GNPHFI 434
T KD + YFS FG +++ ++ Q R FGF+TF ETV+ ++++ G PH +
Sbjct: 102 TVKDFEFREYFSRFGNIKEAQVCTDQHTRRSRGFGFITFEKWETVEELISQQQDGRPHVV 161
Query: 435 CDSRVLVKP 443
V V P
Sbjct: 162 EGKEVEVGP 170
>gi|389626835|ref|XP_003711071.1| pre-mRNA-splicing factor CWC2 [Magnaporthe oryzae 70-15]
gi|148887365|sp|Q51TF7.2|CWC2_MAGO7 RecName: Full=Pre-mRNA-splicing factor CWC2
gi|322366727|gb|ADW95446.1| splicing factor Cwc2 [Magnaporthe oryzae]
gi|351650600|gb|EHA58459.1| pre-mRNA-splicing factor CWC2 [Magnaporthe oryzae 70-15]
Length = 394
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 198 FSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFN-----LGYRPCLYFARGFCKNGE 252
++ W +GGD ++ +A C +D+G+ G CL+FARG C G+
Sbjct: 68 YNKW-----SGGDREDKYTSQTAAKGRCNVAKDSGYTKADQTTGSYFCLFFARGVCPKGQ 122
Query: 253 SCKFVH 258
C+++H
Sbjct: 123 DCEYLH 128
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 372 QIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQ--KRM--FGFVTFVYPETVK 423
++++ A +T +DE + YFS FG V++V++ Y + KRM FGFVTF ETVK
Sbjct: 102 KVFIGGVAQNTSEDE-IKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETVK 156
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 371 RQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLIL 426
R+I++ A ST + D YF FG + DV + Y Q+ R FGF+T+ E V
Sbjct: 106 RKIFVGGLA-STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD--- 161
Query: 427 ARGNPHFICDSRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSPSG 471
+VL+K + E GK+VE ++ + + P +P G
Sbjct: 162 -----------KVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLG 196
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 19/97 (19%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETVKLILARGNPHFICD 436
S ++++ +F+ FG VQDV I Q R FGF+TF E+V+ ++++ H++
Sbjct: 109 SNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFDCEESVEKVISQ---HYV-- 163
Query: 437 SRVLVKPYKEKGKIVE-KRQQQFERGNMSPCSS-PSG 471
KGK VE KR Q E M+ C++ PSG
Sbjct: 164 --------PVKGKQVECKRAQPREMKLMADCAALPSG 192
>gi|301508557|gb|ADK78240.1| heterogeneous nuclear ribonucleoprotein A2 [Schmidtea mediterranea]
Length = 331
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQ----QKRMFGFVTFV-YPETVKLILARGNPHFICDSRVL 440
E + +YF+ +G + D I + R FGFVTF Y K IL + PH I SRV
Sbjct: 122 EHLRHYFTSYGTITDCEIVTWKDSGESRGFGFVTFDDYDPVDKAILYK--PHQIGSSRVD 179
Query: 441 VKPYKEKGKIVEKRQQQFERGNMSPCSSPS 470
VK K ++ E R++Q CS+ S
Sbjct: 180 VKKALSKDEMEEIRRKQHNEPLSVNCSTSS 209
>gi|403332576|gb|EJY65317.1| CCCH zinc finger and RRM domain protein [Oxytricha trifallax]
Length = 680
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 350 GRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQKR 409
G + N LA A KL + IY+ D D+++YFS FG + ++ + +K
Sbjct: 380 GAPQINSTLANMPAAKLQARKFSIYVKNIPDDLNNIGDLNSYFSQFGHINNINVDLTKK- 438
Query: 410 MFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSP 469
+ F E+ + A + I ++ + Y ++E +QQQ E GN SP P
Sbjct: 439 -TALIKFKEIESAQ--KAAASTDIILNNPKIKVIY----TVIEPQQQQNEEGN-SPSKGP 490
Query: 470 SG-----VDSRDPYDLH-------LGSKMFTQELMLR-RKLEEQAELQQAIELQRRRLM 515
+ + + ++ G+K + E M R RKL AEL++ IE QR+ LM
Sbjct: 491 NSQTQNQITQQKKEEIQAQTVISKAGNKTYESEEMQRKRKL---AELKKEIEQQRKDLM 546
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 364 EKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRI---PYQQK-RMFGFVTFVYP 419
EK N+++++ + +T E + NYF +G ++DV I P ++ R FGFVTF+
Sbjct: 10 EKYHETNKKLFIGGLSPNT-TLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEY 68
Query: 420 ETVKLILARGNPHFICDSRV 439
T++ IL +PHF+ ++
Sbjct: 69 STIEKILL-NSPHFLDSKKI 87
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 19/80 (23%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
S+ +E+ NYF FG + DV + Y Q+ R FGF+TF + V
Sbjct: 120 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVD------------- 166
Query: 437 SRVLVKPYKE-KGKIVEKRQ 455
RVL K + E GK+VE ++
Sbjct: 167 -RVLHKTFHELNGKLVEVKR 185
>gi|399218473|emb|CCF75360.1| unnamed protein product [Babesia microti strain RI]
Length = 518
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 369 ANRQIYLTFPADSTFK--DEDVSNYFSIFGPVQDVRIPYQQKRM-----FGFVTFVYPET 421
NR Y F F+ +D+ NYF FG V+D P Q + FGF++F E
Sbjct: 117 VNRDRYRIFVTRIPFEATSDDIENYFKQFGEVEDAYCPKQPGKAHLNKGFGFISFKNDEV 176
Query: 422 VKLILARGNPHFICDSRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSRD 476
++ + PH I ++V K + +QQ +R + S +D+ D
Sbjct: 177 LQAVF-NARPHTILGREIVVD------KATIRSEQQTDRKRVDYSRSKRSLDAPD 224
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
S+ +E+ NYF FG + DV + Y Q+ R FGF+TF + V
Sbjct: 119 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVD------------- 165
Query: 437 SRVLVKPYKE-KGKIVE-KRQQQFERGNMSPCSSP--SGVD 473
RVL K + E GK+VE KR E +S SP SGV+
Sbjct: 166 -RVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVN 205
>gi|301121144|ref|XP_002908299.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103330|gb|EEY61382.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 489
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 236 GY-RPCLYFARGFCKNGESCKFVHGGFGDGGDVN 268
GY +PC +F +G C+NG +C+F H FG G+ N
Sbjct: 6 GYVKPCKFFLQGTCRNGNNCRFSHDAFGSNGNRN 39
>gi|294878540|ref|XP_002768400.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
gi|239870803|gb|EER01118.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
Length = 414
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
+++ +YFS FG ++D + + R FGF+TF++P+ ++ L +PH + D + V
Sbjct: 57 QELKDYFSQFGEIEDSIVMMDRVTGRSRGFGFITFLHPQDMEACLDD-SPHVVMDKTIDV 115
Query: 442 KPYKEKG 448
K E G
Sbjct: 116 KRAVEGG 122
>gi|443896678|dbj|GAC74022.1| hypothetical protein PANT_9c00414, partial [Pseudozyma antarctica
T-34]
Length = 530
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 238 RP-CLYFARGFCKNGESCKFVHGGFGDGGDVNGVIVGSPN 276
RP CL+FAR CK+GE C+F H DG D G G N
Sbjct: 426 RPACLFFARSACKHGEDCRFPH-ILPDGTDARGPNAGRSN 464
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 39.3 bits (90), Expect = 6.7, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIP----YQQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
T + ED+ F FGP++DV +P ++ R FGFV F YPE + R H +
Sbjct: 67 TARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAA-VAKREMHHQVIGG 125
Query: 438 RVLVKPYKEKGK 449
R + Y E+ +
Sbjct: 126 REISIVYAEENR 137
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 362 LAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQQ-----KRMFGFVTF 416
L ++ +ANR I++T A KD D+ +YF FG V D P Q + FGF++F
Sbjct: 110 LDDEKINANR-IFITRIAFEATKD-DLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISF 167
Query: 417 VYPETVKLILARGNPHFICDSRVLV 441
++++ + G PH I V+V
Sbjct: 168 ENEDSIRKVFESG-PHVIMGREVIV 191
>gi|440466593|gb|ELQ35853.1| pre-mRNA-splicing factor cwc2 [Magnaporthe oryzae Y34]
gi|440486849|gb|ELQ66677.1| pre-mRNA-splicing factor cwc2 [Magnaporthe oryzae P131]
Length = 580
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 198 FSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFN-----LGYRPCLYFARGFCKNGE 252
++ W +GGD ++ +A C +D+G+ G CL+FARG C G+
Sbjct: 68 YNKW-----SGGDREDKYTSQTAAKGRCNVAKDSGYTKADQTTGSYFCLFFARGVCPKGQ 122
Query: 253 SCKFVH 258
C+++H
Sbjct: 123 DCEYLH 128
>gi|432957822|ref|XP_004085896.1| PREDICTED: probable RNA-binding protein 19-like, partial [Oryzias
latipes]
Length = 278
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 347 FGQGRAERNDFLAMGLAEKLTSANRQIYLTFPADSTFKDEDVSNYFSIFGPVQDVRIPYQ 406
G G E + L+ +++ +R I P + K+E S+ F+ FG + D + +
Sbjct: 48 IGLGNLEEDQEFKEFLSTAISTMSRLIVKNLP--NGMKEERFSSMFAAFGTLTDCSLKFT 105
Query: 407 QK---RMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYKE-----KGKIVEKRQQ 456
+ R FGFV F E L N F+ SRV V+ K KGK K Q
Sbjct: 106 KDGKFRKFGFVGFKSEEDASRALKHFNRSFVDTSRVTVEICKAFGDPTKGKAWSKHTQ 163
>gi|402082151|gb|EJT77296.1| pre-mRNA-splicing factor CWC2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 397
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 198 FSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFN-----LGYRPCLYFARGFCKNGE 252
++ W +GGD ++ +A C D+G+ G CL+FARG C G+
Sbjct: 70 YNKW-----SGGDREDKYSSQTAAKGRCHVARDSGYTRADQVTGSFFCLFFARGVCHKGQ 124
Query: 253 SCKFVH 258
C+++H
Sbjct: 125 DCEYLH 130
>gi|308812886|ref|XP_003083750.1| unnamed protein product [Ostreococcus tauri]
gi|116055631|emb|CAL58299.1| unnamed protein product [Ostreococcus tauri]
Length = 228
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 195 RSQFSNWGQDLNNGGDVHLQHRRSFSASDACFGTEDAGFNLGYRPCLYFARGFCKNGESC 254
R + G N+GG V R + D G E + C++F RG C+ G++C
Sbjct: 144 RGRTDGHGGSANDGG-VRRWRRDGTWSRDGTDGAEVPDVDTSGIQCIFFQRGSCRAGDAC 202
Query: 255 KFVHGGFGDGGDVNGVIVGSPNKMD 279
K+ H G G G V G+ +M+
Sbjct: 203 KYSHAGEGAGTATTDVSAGTEMQMN 227
>gi|71033517|ref|XP_766400.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353357|gb|EAN34117.1| hypothetical protein TP01_0879 [Theileria parva]
Length = 322
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQ----KRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
ED+ YFS FG V I + R FGFVTF E+V +L + + ++ V +
Sbjct: 70 EDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAERESVNTVLRKSHTIDGVEADVKL 129
Query: 442 KPYKEKGKIVEKRQQQFER 460
KEK KI+ + Q +R
Sbjct: 130 AVRKEKAKILAPQYDQTKR 148
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 382 TFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICDS 437
T ++D YF FG + DV + Y Q+ R FGF+TF E V ++ + N H + D
Sbjct: 114 TVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMK-NFHELHDK 172
Query: 438 RVLVK 442
V VK
Sbjct: 173 TVEVK 177
>gi|147789024|emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRI----PYQQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST +++ ++FS +G V++ +I + R FGF+ F E V IL+ GN +
Sbjct: 101 STVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAG 160
Query: 437 SRVLVKPYKEKGKIVEKRQQQFERGNMSPCSSPSGVDSR 475
++V + + + K VE ++ + ++ + P S G +SR
Sbjct: 161 TQVSILQWSPRNKHVEIKKAEPKKASNPPHVSAFGSNSR 199
>gi|170057997|ref|XP_001864728.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
gi|167877238|gb|EDS40621.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
Length = 540
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLV 441
+D+ YFS +G V DV IP + R F FVTF+ P + + G H I + V V
Sbjct: 223 DDIREYFSKYGEVTDVFIP-KPFRAFAFVTFIDPHVAQSLC--GEDHLIKGASVYV 275
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLILARGNPHFI-- 434
S + D+ +YF+ FG V +V I Y Q+ R FGF++F E V +A HF+
Sbjct: 99 SNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAE---HFVNL 155
Query: 435 CDSRVLVKPYKEKGKIVEKRQQQFE-----------RGNMSPCSSPSG 471
+V +K + K+ + Q Q+ GNM P P+G
Sbjct: 156 NGKQVEIKRAESSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNG 203
>gi|195590439|ref|XP_002084953.1| GD12565 [Drosophila simulans]
gi|194196962|gb|EDX10538.1| GD12565 [Drosophila simulans]
Length = 319
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVKPYK 445
ED+ YFS FG V +V IP + R F FVTF+ P +L+ G H I V V+
Sbjct: 206 EDLREYFSQFGEVIEVVIP-KPFRGFSFVTFLDPYIPQLLW--GEDHII--KGVSVRVSS 260
Query: 446 EKGKIVEKRQQQFERGNMS 464
++V K+ QQ + N +
Sbjct: 261 ADKRVVPKKNQQIQSNNFN 279
>gi|156382516|ref|XP_001632599.1| predicted protein [Nematostella vectensis]
gi|156219657|gb|EDO40536.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 39.3 bits (90), Expect = 7.6, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 387 DVSNYFSIFGPVQDVRIPYQQK----RMFGFVTFVYPETVKLILARGNPHFICDSRVLVK 442
++ +FS FGPV DVRI ++ + FGF+TF E K ++ + N F S L +
Sbjct: 32 ELETFFSNFGPVADVRIVCDRRTGLNKGFGFITFSLEEPAKKLIEQNNIDFKGRSLRLRQ 91
Query: 443 PYKEKG 448
++KG
Sbjct: 92 AIRKKG 97
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 386 EDVSNYFSIFGPVQDVRI----PYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRV-- 439
E + YFS FG + +V + ++ R FGFVTF P +V +LA G PH + ++
Sbjct: 65 EGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPASVDKVLANG-PHELDGKKIDP 123
Query: 440 -LVKPYKEKGKIVEKRQQQFERGNMSPCS 467
+ P + K+V + ++ F G +P +
Sbjct: 124 KIAFPKRAHPKMVTRTKKVFVGGLSAPTT 152
>gi|195028318|ref|XP_001987023.1| GH20198 [Drosophila grimshawi]
gi|193903023|gb|EDW01890.1| GH20198 [Drosophila grimshawi]
Length = 545
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 386 EDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRVLVK--- 442
+D+ YFS FG V DV IP + R F FVTF+ P+ + + G H I V V
Sbjct: 206 DDLREYFSKFGEVTDVFIP-RPFRAFSFVTFLDPDVAQSLC--GEDHIIKGVSVHVSNAA 262
Query: 443 PYKEKGKIVEKRQQQFERGN 462
P E+ + + + + GN
Sbjct: 263 PKAEQNRSHQAQNYSYNTGN 282
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 381 STFKDEDVSNYFSIFGPVQDVRIPY----QQKRMFGFVTFVYPETVKLILARGNPHFICD 436
ST + D YF FG + DV + Y Q+ R FGF+T+ E V
Sbjct: 116 STVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVD------------- 162
Query: 437 SRVLVKPYKE-KGKIVEKRQQQFERGNMSPCSSPSG 471
+VL+K + E GK+VE ++ + + P SP G
Sbjct: 163 -KVLMKTFHELNGKMVEVKRAVPKELSPGPSRSPLG 197
>gi|449689889|ref|XP_002155955.2| PREDICTED: polyadenylate-binding protein 1-like, partial [Hydra
magnipapillata]
Length = 224
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 370 NRQIYLT-FPADSTFKDEDVSNYFSIFGPVQDVRIPYQQK--RMFGFVTFV 417
NR++++T P KD ++ YF FGPVQD I Y ++ + FGFVT V
Sbjct: 36 NRRLHVTNLPFK--IKDVELKQYFEGFGPVQDAEIIYNERGSKGFGFVTMV 84
>gi|336373129|gb|EGO01467.1| hypothetical protein SERLA73DRAFT_166027 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385985|gb|EGO27131.1| hypothetical protein SERLADRAFT_446355 [Serpula lacrymans var.
lacrymans S7.9]
Length = 872
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 197 QFSNWGQDLNNGGDVHLQHRRSFSASDACFGT--------EDAGF-NLGYRPCLYFARGF 247
Q++++GQD + G + RR + S ED GF N +PC +FA G
Sbjct: 801 QYADYGQDYADDGS---RDRRWGADSRGRGRGRGRGRGRGEDVGFRNNKRKPCSFFAAGR 857
Query: 248 CKNGESCKFVH 258
CK G+ C F H
Sbjct: 858 CKFGDQCDFSH 868
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 380 DSTFKDEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILARGNPHFICDSRV 439
D +ED++N FS FGP+ + +R F FV FV ++ + N + +++
Sbjct: 182 DGKVSEEDLTNAFSKFGPINKI----DYRRNFAFVDFVKSRDAEVAMREMNERVLLGTKL 237
Query: 440 LVKPYKEKGKIVE 452
V P+ E+ K E
Sbjct: 238 KVVPHSERSKRSE 250
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,666,862,171
Number of Sequences: 23463169
Number of extensions: 476813583
Number of successful extensions: 1678739
Number of sequences better than 100.0: 860
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 660
Number of HSP's that attempted gapping in prelim test: 1658315
Number of HSP's gapped (non-prelim): 16217
length of query: 666
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 517
effective length of database: 8,863,183,186
effective search space: 4582265707162
effective search space used: 4582265707162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)