Query 039865
Match_columns 148
No_of_seqs 142 out of 2100
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 03:48:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 4E-33 1.4E-37 171.7 4.9 132 1-147 12-143 (169)
2 4gpm_A Engineered protein OR26 100.0 1.8E-29 6E-34 155.4 6.1 115 2-130 46-160 (169)
3 3f6q_A Integrin-linked protein 100.0 3.5E-29 1.2E-33 155.4 6.6 133 2-148 14-146 (179)
4 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.6E-29 5.5E-34 155.6 4.3 131 2-147 23-153 (169)
5 3v30_A DNA-binding protein rfx 100.0 2.5E-29 8.7E-34 155.0 4.7 132 2-147 11-142 (172)
6 3twr_A Tankyrase-2; ankyrin re 100.0 5.3E-29 1.8E-33 152.6 5.4 133 2-148 17-149 (165)
7 3v31_A Ankyrin repeat family A 100.0 3.9E-29 1.3E-33 153.4 4.7 131 2-147 12-142 (167)
8 4b93_B Ankyrin repeat domain-c 100.0 4.8E-29 1.6E-33 163.8 4.9 137 8-148 68-226 (269)
9 1awc_B Protein (GA binding pro 100.0 4.3E-29 1.5E-33 151.3 4.1 130 2-147 11-140 (153)
10 1s70_B 130 kDa myosin-binding 99.9 1.6E-28 5.5E-33 163.0 5.7 142 2-147 49-272 (299)
11 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.1E-29 1.1E-33 153.1 0.7 131 2-147 14-144 (162)
12 2xai_A ASB-9, ankyrin repeat a 99.9 3E-28 1E-32 159.3 5.3 144 2-148 12-207 (261)
13 1yyh_A HN1;, notch 1, ankyrin 99.9 8E-29 2.7E-33 161.3 2.3 142 4-147 34-197 (253)
14 1oy3_D Transcription factor in 99.9 1.1E-28 3.8E-33 162.4 3.0 79 3-82 19-99 (282)
15 2rfm_A Putative ankyrin repeat 99.9 7.8E-29 2.7E-33 155.3 2.0 131 2-147 44-174 (192)
16 3aji_A 26S proteasome non-ATPa 99.9 2.2E-28 7.4E-33 157.1 3.3 141 3-147 50-212 (231)
17 3hra_A Ankyrin repeat family p 99.9 1.6E-28 5.5E-33 154.7 2.5 144 2-147 14-185 (201)
18 3b7b_A Euchromatic histone-lys 99.9 3.4E-28 1.1E-32 156.7 4.1 142 3-147 21-217 (237)
19 2jab_A H10-2-G3; HER2, darpin, 99.9 9.4E-28 3.2E-32 142.8 4.9 113 2-128 23-135 (136)
20 1oy3_D Transcription factor in 99.9 1.4E-28 4.8E-33 161.9 1.4 145 2-148 54-266 (282)
21 1k1a_A B-cell lymphoma 3-encod 99.9 1.3E-27 4.6E-32 154.1 5.8 143 3-148 56-224 (241)
22 2dzn_A Probable 26S proteasome 99.9 9E-28 3.1E-32 153.8 4.1 82 3-84 12-95 (228)
23 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.6E-28 1.9E-32 146.7 3.0 130 2-147 11-140 (156)
24 1bi7_B P16INK4A, MTS1, multipl 99.9 3.3E-28 1.1E-32 147.9 2.0 128 2-145 21-149 (156)
25 1yyh_A HN1;, notch 1, ankyrin 99.9 3.5E-28 1.2E-32 158.3 2.0 143 2-147 66-230 (253)
26 1sw6_A Regulatory protein SWI6 99.9 6.2E-28 2.1E-32 162.5 3.0 144 2-148 140-324 (327)
27 3d9h_A CDNA FLJ77766, highly s 99.9 1.9E-27 6.4E-32 157.4 5.0 144 2-148 68-263 (285)
28 2dzn_A Probable 26S proteasome 99.9 2.1E-27 7E-32 152.1 4.9 143 3-148 46-216 (228)
29 2f8y_A Notch homolog 1, transl 99.9 1.2E-27 4.1E-32 152.8 3.8 143 2-147 34-198 (223)
30 2f8y_A Notch homolog 1, transl 99.9 9.3E-29 3.2E-33 158.0 -1.6 142 4-147 2-165 (223)
31 3aji_A 26S proteasome non-ATPa 99.9 8.9E-28 3.1E-32 154.2 2.8 143 2-147 15-179 (231)
32 2vge_A RELA-associated inhibit 99.9 1.6E-27 5.4E-32 153.3 3.5 112 2-127 30-144 (229)
33 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-26 5.4E-31 140.3 7.3 113 1-128 43-155 (156)
34 1d9s_A Cyclin-dependent kinase 99.9 5.9E-28 2E-32 143.7 0.8 113 2-129 21-134 (136)
35 1ikn_D Protein (I-kappa-B-alph 99.9 3.3E-27 1.1E-31 152.1 4.4 81 3-84 55-140 (236)
36 3utm_A Tankyrase-1; tankyrase, 99.9 8.6E-27 2.9E-31 157.4 6.4 82 2-85 67-148 (351)
37 3twr_A Tankyrase-2; ankyrin re 99.9 2.8E-26 9.6E-31 140.4 7.6 114 2-130 51-164 (165)
38 2rfa_A Transient receptor pote 99.9 4.8E-27 1.6E-31 150.9 4.1 143 2-147 12-161 (232)
39 3v30_A DNA-binding protein rfx 99.9 4.4E-27 1.5E-31 144.9 3.4 126 2-142 45-170 (172)
40 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.4E-26 1.2E-30 139.5 7.0 115 3-130 47-161 (162)
41 1k1a_A B-cell lymphoma 3-encod 99.9 6.3E-27 2.1E-31 150.9 3.4 143 2-147 18-190 (241)
42 3c5r_A BARD-1, BRCA1-associate 99.9 2.7E-26 9.1E-31 136.6 5.4 112 3-128 20-131 (137)
43 2rfa_A Transient receptor pote 99.9 3E-26 1E-30 147.2 5.6 133 2-147 46-204 (232)
44 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2E-26 6.8E-31 135.0 4.4 115 2-130 11-125 (126)
45 4b93_B Ankyrin repeat domain-c 99.9 1.2E-26 4.2E-31 152.4 3.9 124 21-147 46-192 (269)
46 4g8k_A 2-5A-dependent ribonucl 99.9 1.2E-26 4.2E-31 156.5 3.4 144 2-147 34-280 (337)
47 3c5r_A BARD-1, BRCA1-associate 99.9 4.8E-26 1.6E-30 135.5 5.6 113 22-148 5-117 (137)
48 1ikn_D Protein (I-kappa-B-alph 99.9 1.5E-25 5.3E-30 144.3 8.3 134 2-148 87-227 (236)
49 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.2E-26 2.5E-30 139.2 6.1 113 2-128 56-168 (169)
50 3aaa_C Myotrophin, protein V-1 99.9 1.1E-25 3.7E-30 131.7 6.3 105 2-120 16-120 (123)
51 4hbd_A KN motif and ankyrin re 99.9 1.1E-26 3.9E-31 153.0 2.2 133 2-147 120-257 (276)
52 1awc_B Protein (GA binding pro 99.9 5.8E-26 2E-30 137.5 5.0 110 2-125 43-152 (153)
53 1n11_A Ankyrin; clathrin, BAND 99.9 2.2E-26 7.6E-31 159.9 3.5 141 3-147 222-384 (437)
54 3f6q_A Integrin-linked protein 99.9 1.6E-25 5.4E-30 138.8 6.8 119 2-135 48-166 (179)
55 1wdy_A 2-5A-dependent ribonucl 99.9 2.8E-26 9.4E-31 150.9 3.1 142 4-147 83-260 (285)
56 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.8E-26 1.7E-30 147.1 4.1 113 2-128 46-161 (239)
57 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.9E-26 6.6E-31 149.0 1.8 130 2-147 14-144 (239)
58 1n11_A Ankyrin; clathrin, BAND 99.9 2E-26 6.8E-31 160.1 1.8 140 2-145 23-184 (437)
59 3eu9_A Huntingtin-interacting 99.9 3E-26 1E-30 147.4 2.3 142 3-147 52-217 (240)
60 2etb_A Transient receptor pote 99.9 1.5E-26 5E-31 150.7 0.6 130 3-147 56-228 (256)
61 2pnn_A Transient receptor pote 99.9 7.4E-26 2.5E-30 148.7 3.7 136 2-144 110-271 (273)
62 2rfm_A Putative ankyrin repeat 99.9 2.5E-25 8.4E-30 139.3 5.5 113 2-128 77-189 (192)
63 3jxi_A Vanilloid receptor-rela 99.9 1.8E-26 6.2E-31 150.6 0.3 132 2-147 58-232 (260)
64 3ljn_A Hypothetical protein; a 99.9 6.7E-26 2.3E-30 154.3 3.0 135 3-147 94-251 (364)
65 1wdy_A 2-5A-dependent ribonucl 99.9 2.4E-25 8.4E-30 146.3 5.2 131 2-147 14-155 (285)
66 3kea_A K1L; tropism, ANK repea 99.9 3.1E-26 1E-30 151.6 0.7 77 3-83 41-117 (285)
67 1d9s_A Cyclin-dependent kinase 99.9 2.2E-26 7.7E-31 136.9 0.1 115 17-147 3-118 (136)
68 2b0o_E UPLC1; arfgap, structur 99.9 9.6E-26 3.3E-30 150.2 2.8 126 2-148 160-294 (301)
69 2fo1_E LIN-12 protein; beta-ba 99.9 1.6E-26 5.3E-31 158.1 -1.0 132 14-147 154-320 (373)
70 3v31_A Ankyrin repeat family A 99.9 3.5E-25 1.2E-29 135.8 5.1 113 2-128 45-157 (167)
71 3ehr_A Osteoclast-stimulating 99.9 3E-25 1E-29 141.8 4.9 115 2-130 82-197 (222)
72 3utm_A Tankyrase-1; tankyrase, 99.9 1.7E-25 5.8E-30 151.0 3.9 132 2-147 33-164 (351)
73 3hra_A Ankyrin repeat family p 99.9 1.3E-25 4.6E-30 141.3 3.0 126 2-129 48-201 (201)
74 3lvq_E ARF-GAP with SH3 domain 99.9 1.7E-25 5.8E-30 158.0 3.9 120 2-136 141-269 (497)
75 3ljn_A Hypothetical protein; a 99.9 4.8E-25 1.6E-29 150.1 5.7 115 2-130 147-268 (364)
76 3t8k_A Uncharacterized protein 99.9 3.9E-26 1.3E-30 142.5 0.2 130 2-147 15-161 (186)
77 3eu9_A Huntingtin-interacting 99.9 4.1E-25 1.4E-29 142.1 4.9 130 2-145 18-147 (240)
78 2fo1_E LIN-12 protein; beta-ba 99.9 3.6E-26 1.2E-30 156.3 -0.1 143 2-147 175-353 (373)
79 3aaa_C Myotrophin, protein V-1 99.9 1.7E-25 5.8E-30 130.9 2.7 111 24-148 4-114 (123)
80 2pnn_A Transient receptor pote 99.9 7.5E-26 2.6E-30 148.7 1.0 131 3-147 67-240 (273)
81 3jxi_A Vanilloid receptor-rela 99.9 3.3E-25 1.1E-29 144.6 4.0 122 2-130 102-249 (260)
82 3kea_A K1L; tropism, ANK repea 99.9 1.4E-25 4.9E-30 148.4 1.9 130 1-147 70-202 (285)
83 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.8E-25 2E-29 122.7 3.8 92 26-130 1-92 (93)
84 4hbd_A KN motif and ankyrin re 99.9 9.1E-25 3.1E-29 143.9 5.3 115 2-130 159-274 (276)
85 2etb_A Transient receptor pote 99.9 4.6E-25 1.6E-29 143.7 3.8 122 2-130 99-245 (256)
86 3jue_A Arfgap with coiled-coil 99.9 2.7E-24 9.2E-29 146.5 7.1 113 2-128 208-323 (368)
87 1dcq_A PYK2-associated protein 99.9 3.4E-24 1.1E-28 141.4 5.8 116 2-130 139-262 (278)
88 2vge_A RELA-associated inhibit 99.9 5.2E-24 1.8E-28 136.9 6.2 125 9-147 1-128 (229)
89 2l6b_A NR1C; ankyrin, consensu 99.9 1.5E-24 5.1E-29 125.4 2.9 109 22-144 4-112 (115)
90 3d9h_A CDNA FLJ77766, highly s 99.9 8.9E-25 3.1E-29 144.5 1.9 144 1-147 23-197 (285)
91 3deo_A Signal recognition part 99.9 3.8E-24 1.3E-28 133.1 4.3 107 2-123 53-160 (183)
92 2xai_A ASB-9, ankyrin repeat a 99.9 6.9E-24 2.4E-28 138.6 5.7 127 4-147 112-245 (261)
93 3ui2_A Signal recognition part 99.9 1.4E-24 4.8E-29 140.7 1.8 123 1-127 53-181 (244)
94 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-24 5.8E-29 128.7 1.1 110 24-147 11-120 (136)
95 3t8k_A Uncharacterized protein 99.9 3.1E-24 1E-28 133.9 1.3 108 6-127 55-175 (186)
96 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9.1E-24 3.1E-28 123.5 2.9 108 26-147 1-108 (126)
97 3ehr_A Osteoclast-stimulating 99.9 2.2E-24 7.6E-29 137.8 -0.3 112 23-148 69-181 (222)
98 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7E-22 2.4E-26 110.1 8.4 82 2-85 11-92 (93)
99 3b7b_A Euchromatic histone-lys 99.9 9.9E-23 3.4E-27 131.1 5.3 121 3-125 87-229 (237)
100 3deo_A Signal recognition part 99.9 1.1E-23 3.6E-28 131.1 0.3 109 24-147 41-150 (183)
101 1sw6_A Regulatory protein SWI6 99.9 4.5E-24 1.5E-28 143.7 -1.5 110 6-128 110-227 (327)
102 3ui2_A Signal recognition part 99.9 2.6E-23 8.9E-28 134.8 0.3 108 25-147 43-151 (244)
103 4g8k_A 2-5A-dependent ribonucl 99.9 5.3E-22 1.8E-26 133.8 6.0 103 8-129 221-324 (337)
104 1s70_B 130 kDa myosin-binding 99.9 6.3E-23 2.2E-27 136.1 1.1 131 3-147 8-146 (299)
105 1bi7_B P16INK4A, MTS1, multipl 99.8 1.2E-20 4.1E-25 114.5 9.1 96 2-111 53-149 (156)
106 2b0o_E UPLC1; arfgap, structur 99.8 2.3E-20 7.7E-25 124.4 10.6 97 3-119 203-299 (301)
107 2zgd_A 3 repeat synthetic anky 99.8 6.8E-22 2.3E-26 113.4 2.6 92 21-125 18-109 (110)
108 2l6b_A NR1C; ankyrin, consensu 99.8 7.7E-21 2.6E-25 109.7 5.6 83 2-86 18-100 (115)
109 2aja_A Ankyrin repeat family p 99.8 1.6E-23 5.5E-28 143.1 -7.1 114 2-127 101-220 (376)
110 1dcq_A PYK2-associated protein 99.8 8.3E-19 2.8E-23 115.6 10.8 78 4-83 183-260 (278)
111 2zgd_A 3 repeat synthetic anky 99.8 5.2E-19 1.8E-23 101.3 8.3 77 2-80 33-109 (110)
112 3jue_A Arfgap with coiled-coil 99.8 2.4E-20 8.3E-25 127.1 1.6 107 27-147 199-308 (368)
113 2aja_A Ankyrin repeat family p 99.8 2.1E-21 7.2E-26 132.7 -6.0 108 1-129 136-248 (376)
114 3lvq_E ARF-GAP with SH3 domain 99.8 5.5E-18 1.9E-22 119.8 9.7 84 2-87 183-266 (497)
115 3zrh_A Ubiquitin thioesterase 65.5 20 0.00069 25.1 5.7 45 4-48 33-90 (454)
116 1gp8_A Protein (scaffolding pr 50.9 15 0.00052 16.1 2.1 17 31-47 17-33 (40)
117 3zrh_A Ubiquitin thioesterase 35.3 1.2E+02 0.004 21.5 6.5 48 35-82 30-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4e-33 Score=171.72 Aligned_cols=132 Identities=31% Similarity=0.396 Sum_probs=120.5
Q ss_pred CCCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 1 SLLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 1 a~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
|..|+.++|+.|+++|+++ +.+|..|.||||+|+..++.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|
T Consensus 12 a~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~L 89 (169)
T 4gpm_A 12 AENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLL 89 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHH
Confidence 3579999999999999998 999999999999999999999999999999998 89999999999999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
++.+++ ++..|..|+||||+|+..|+.+++++|++.+. +++..+..+.||+++|
T Consensus 90 l~~gad------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga-d~~~~d~~G~TpL~~A 143 (169)
T 4gpm_A 90 ISKGAD------------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNTSDSDGRTPLDLA 143 (169)
T ss_dssp HHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred HHCcCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHH
Confidence 996655 47778899999999999999999999998655 7888888888988776
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=1.8e-29 Score=155.43 Aligned_cols=115 Identities=31% Similarity=0.417 Sum_probs=106.2
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.++++.|+++++++ +.++..|+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+
T Consensus 46 ~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll 123 (169)
T 4gpm_A 46 ENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLI 123 (169)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 467899999999999998 999999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
+.+++ ++..|..|+||||+|+..|+.+++++|++.|+
T Consensus 124 ~~gad------------~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 124 SKGAD------------VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HcCCC------------ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 96655 47789999999999999999999999999665
No 3
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3.5e-29 Score=155.35 Aligned_cols=133 Identities=22% Similarity=0.216 Sum_probs=120.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++..++..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 14 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 92 (179)
T 3f6q_A 14 REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLL 92 (179)
T ss_dssp HHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4689999999999976656999999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
+.+.+ ++..+..|.||||+|+..++.+++++|++.+. +++..+..+.+|+++|.
T Consensus 93 ~~g~~------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~tpl~~A~ 146 (179)
T 3f6q_A 93 QYKAD------------INAVNEHGNVPLHYACFWGQDQVAEDLVANGA-LVSICNKYGEMPVDKAK 146 (179)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CSSBCCTTSCCGGGGSC
T ss_pred HcCCC------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CcchhccCCCCcHHHHH
Confidence 96555 47778999999999999999999999998755 78888899999998874
No 4
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.6e-29 Score=155.57 Aligned_cols=131 Identities=30% Similarity=0.406 Sum_probs=119.5
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++++.++ +.++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 23 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll 100 (169)
T 2y1l_E 23 RAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLL 100 (169)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999997 899999999999999999999999999999998 789999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|.||||+|+..++.+++++|++.+. +++..+..+.+|+++|
T Consensus 101 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A 153 (169)
T 2y1l_E 101 KNGAD------------VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA-DVNAQDKFGKTAFDIS 153 (169)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred HcCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHH
Confidence 96554 46778899999999999999999999998755 7888888888888765
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2.5e-29 Score=154.97 Aligned_cols=132 Identities=23% Similarity=0.258 Sum_probs=119.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++..++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 11 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (172)
T 3v30_A 11 AQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLL 89 (172)
T ss_dssp HTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHH
Confidence 5789999999999999866999999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|+||||+|+..++.+++++|++.+. +++..+..+.||+++|
T Consensus 90 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A 142 (172)
T 3v30_A 90 ERDVD------------INIYDWNGGTPLLYAVRGNHVKCVEALLARGA-DLTTEADSGYTPMDLA 142 (172)
T ss_dssp TTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred HcCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHH
Confidence 96554 46778899999999999999999999998654 7888888888888765
No 6
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=5.3e-29 Score=152.58 Aligned_cols=133 Identities=23% Similarity=0.267 Sum_probs=119.5
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 17 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 95 (165)
T 3twr_A 17 KAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLV 95 (165)
T ss_dssp HHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 4689999999999776555788888999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
+.+.+ ++..+..|+||||+|+..++.+++++|++.+. +++..+..+.||+++|.
T Consensus 96 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 96 KHGAV------------VNVADLWKFTPLHEAAAKGKYEICKLLLQHGA-DPTKKNRDGNTPLDLVK 149 (165)
T ss_dssp HTTCC------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCTGGGSC
T ss_pred hCCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCChhHhHh
Confidence 96555 46778899999999999999999999998754 88888899999998873
No 7
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=3.9e-29 Score=153.44 Aligned_cols=131 Identities=21% Similarity=0.257 Sum_probs=119.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 12 ~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (167)
T 3v31_A 12 AQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKMLL 89 (167)
T ss_dssp HTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 579999999999999887 999999999999999999999999999999998 788999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|.||||+|+..++.+++++|++.+. +++..+..+.+|+++|
T Consensus 90 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A 142 (167)
T 3v31_A 90 DCGVD------------VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA-DPTIETDSGYNSMDLA 142 (167)
T ss_dssp HHTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred HCCCC------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHH
Confidence 96544 46778899999999999999999999998655 7888888888988765
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=4.8e-29 Score=163.82 Aligned_cols=137 Identities=26% Similarity=0.295 Sum_probs=82.1
Q ss_pred HHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhH
Q 039865 8 FVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQA 87 (148)
Q Consensus 8 ~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~ 87 (148)
+++.|++.|+++ +.+|..|.||||+|+..|+.+++++|++.++++ +..+..|.||+|+|+..++.+++++|++.+.+
T Consensus 68 ~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~- 144 (269)
T 4b93_B 68 RLAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAK- 144 (269)
T ss_dssp -------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCC-
Confidence 445555555554 555555555555555555555555555555554 44444455555555555555555555443221
Q ss_pred HHHHhhcCCchh----------------------hhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCC
Q 039865 88 ALILMERGVTIL----------------------HACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYG 145 (148)
Q Consensus 88 ~~~~~~~g~~~~----------------------~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 145 (148)
++..+..|.+|+ +..+..|.||||+|+..|+.+++++|++.+. +++..+..|.||++
T Consensus 145 ~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga-d~~~~d~~G~TpL~ 223 (269)
T 4b93_B 145 PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGA-SVQVLNKRQRTAVD 223 (269)
T ss_dssp SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC-CSCCCCTTSCCSGG
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHH
Confidence 112222333333 4558899999999999999999999999765 88999999999999
Q ss_pred CCC
Q 039865 146 LSS 148 (148)
Q Consensus 146 ~as 148 (148)
+|.
T Consensus 224 ~A~ 226 (269)
T 4b93_B 224 CAE 226 (269)
T ss_dssp GSC
T ss_pred HHH
Confidence 884
No 9
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=4.3e-29 Score=151.35 Aligned_cols=130 Identities=26% Similarity=0.247 Sum_probs=117.6
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ + .+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 11 ~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 87 (153)
T 1awc_B 11 RAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLL 87 (153)
T ss_dssp HHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence 468999999999999876 4 5888999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|+||||+|+..++.+++++|++.+. +++..+..+.+|+++|
T Consensus 88 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A 140 (153)
T 1awc_B 88 KHGAD------------VNAKDMLKMTALHWATEHNHQEVVELLIKYGA-DVHTQSKFCKTAFDIS 140 (153)
T ss_dssp TTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred HcCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHH
Confidence 96554 46778999999999999999999999998755 7888888899998765
No 10
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=1.6e-28 Score=163.04 Aligned_cols=142 Identities=23% Similarity=0.245 Sum_probs=115.7
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+
T Consensus 49 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll 126 (299)
T 1s70_B 49 SSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLI 126 (299)
T ss_dssp HHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 468999999999999997 899999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHh------------------------------------------------------------hcCCchhhh
Q 039865 82 KGRPQAALILM------------------------------------------------------------ERGVTILHA 101 (148)
Q Consensus 82 ~~~~~~~~~~~------------------------------------------------------------~~g~~~~~~ 101 (148)
+.+.+. ...+ ..|.+|++.
T Consensus 127 ~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~ 205 (299)
T 1s70_B 127 SQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHV 205 (299)
T ss_dssp HTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHH
T ss_pred hCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHH
Confidence 865421 1111 234555554
Q ss_pred c----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 102 C----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 102 ~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+ |..|.||||+|+..|+.+++++|++.+. +++..+..|.||+++|
T Consensus 206 A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-d~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 206 AAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC-DMEAVNKVGQTAFDVA 272 (299)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCTTTSC
T ss_pred HHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHH
Confidence 4 5677788888888888888887777654 6777777777887776
No 11
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=3.1e-29 Score=153.10 Aligned_cols=131 Identities=20% Similarity=0.219 Sum_probs=108.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++++.++ +..+..|.||||+|+. |+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 14 ~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 90 (162)
T 1ihb_A 14 ARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLL 90 (162)
T ss_dssp HHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468889999999888887 8888889999999888 8999999999988888 788888999999999999999999998
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|+||||+|+..++.+++++|++.+...++..+..+.||+++|
T Consensus 91 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A 144 (162)
T 1ihb_A 91 EFQAD------------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLA 144 (162)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHH
T ss_pred HcCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHH
Confidence 86544 3666888889999999989999998888866644677777778887665
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=3e-28 Score=159.27 Aligned_cols=144 Identities=17% Similarity=0.149 Sum_probs=100.1
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++++.++ +.++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 12 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (261)
T 2xai_A 12 IHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLL 89 (261)
T ss_dssp HHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 356777777777777765 677777777777777777777777777777776 666777777777777777777777777
Q ss_pred hcChhH-------------------------------HHHHhhcCCchhhhc---------------------ccCCCce
Q 039865 82 KGRPQA-------------------------------ALILMERGVTILHAC---------------------DDNGNTI 109 (148)
Q Consensus 82 ~~~~~~-------------------------------~~~~~~~g~~~~~~~---------------------~~~g~t~ 109 (148)
+.+.+. ++..+..|.+|++.+ +..|.||
T Consensus 90 ~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~ 169 (261)
T 2xai_A 90 QHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSP 169 (261)
T ss_dssp HTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCH
T ss_pred HCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCh
Confidence 643321 111222344444433 5577888
Q ss_pred eeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 110 LHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 110 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
||+|+..++.+++++|++.+. +++..+..|.||+++|.
T Consensus 170 Lh~A~~~~~~~~v~~Ll~~ga-d~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 170 LHAVARTASEELACLLMDFGA-DTQAKNAEGKRPVELVP 207 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCGGGGSC
T ss_pred HHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCChhhhcc
Confidence 888888888888888888654 78888888888888773
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=8e-29 Score=161.33 Aligned_cols=142 Identities=21% Similarity=0.251 Sum_probs=78.0
Q ss_pred CcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhc
Q 039865 4 GHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKG 83 (148)
Q Consensus 4 g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 83 (148)
++.+++++|+++++++.+..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++.
T Consensus 34 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 112 (253)
T 1yyh_A 34 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRN 112 (253)
T ss_dssp ------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHS
T ss_pred CChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 36777777777777765555777777777777777777777777777776 66777777777777777777777777775
Q ss_pred ChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCC
Q 039865 84 RPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGL 141 (148)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 141 (148)
+.......+..|.+|++.+ +..|+||||+|+..++.+++++|++.+. +++..+..+.
T Consensus 113 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~ 191 (253)
T 1yyh_A 113 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA-NKDMQNNREE 191 (253)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSC
T ss_pred CCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCC
Confidence 5433333334444444433 4455666666666666666666655433 4555555555
Q ss_pred CCCCCC
Q 039865 142 SGYGLS 147 (148)
Q Consensus 142 ~~~~~a 147 (148)
||+++|
T Consensus 192 tpL~~A 197 (253)
T 1yyh_A 192 TPLFLA 197 (253)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 555443
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=1.1e-28 Score=162.36 Aligned_cols=79 Identities=23% Similarity=0.227 Sum_probs=45.4
Q ss_pred CCcHHHHHHHHHhCCcc--ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 3 LGHLDFVQEILRRKPEL--AGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~--~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
.|+.+++++|++.+++. ++.++..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|
T Consensus 19 ~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~L 97 (282)
T 1oy3_D 19 HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVL 97 (282)
T ss_dssp TTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhh
Confidence 45566666666655541 2555555666666666666666666666666555 45555555555555555555555555
Q ss_pred Hh
Q 039865 81 VK 82 (148)
Q Consensus 81 l~ 82 (148)
++
T Consensus 98 l~ 99 (282)
T 1oy3_D 98 LQ 99 (282)
T ss_dssp SS
T ss_pred hc
Confidence 54
No 15
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=7.8e-29 Score=155.29 Aligned_cols=131 Identities=20% Similarity=0.185 Sum_probs=118.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 44 ~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 121 (192)
T 2rfm_A 44 MLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLL 121 (192)
T ss_dssp HHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 458889999999999987 888999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|.||||+|+..++.+++++|++.+. +++..+..+.||+++|
T Consensus 122 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A 174 (192)
T 2rfm_A 122 EHGAN------------VNDRNLEGETPLIVASKYGRSEIVKKLLELGA-DISARDLTGLTAEASA 174 (192)
T ss_dssp HTTCC------------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCBCTTSCBHHHHH
T ss_pred HCCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHH
Confidence 86554 46778999999999999999999999998754 7888888888988765
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=2.2e-28 Score=157.06 Aligned_cols=141 Identities=27% Similarity=0.287 Sum_probs=87.8
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|++++.++ +.++..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|++
T Consensus 50 ~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 127 (231)
T 3aji_A 50 AGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLE 127 (231)
T ss_dssp HTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 35556666666666554 555556666666666666666666666666655 5555666666666666666666666665
Q ss_pred cChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCC
Q 039865 83 GRPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCG 140 (148)
Q Consensus 83 ~~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~ 140 (148)
.+.+ +...+..|.+|++.+ +..|+||||+|+..++.+++++|++.+. +++..+..+
T Consensus 128 ~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g 205 (231)
T 3aji_A 128 GGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA-SIYIENKEE 205 (231)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CSCCCCTTS
T ss_pred cCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CCCCCCCCC
Confidence 3322 112223344444333 6677888888888888888888887644 677777778
Q ss_pred CCCCCCC
Q 039865 141 LSGYGLS 147 (148)
Q Consensus 141 ~~~~~~a 147 (148)
.||+++|
T Consensus 206 ~t~l~~A 212 (231)
T 3aji_A 206 KTPLQVA 212 (231)
T ss_dssp CCHHHHS
T ss_pred CCHHHHH
Confidence 8877766
No 17
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=1.6e-28 Score=154.66 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=107.8
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+.++.|+.+++..++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 14 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll 92 (201)
T 3hra_A 14 NQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYML 92 (201)
T ss_dssp HTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4688889999998887344888888999999999999999999999999888 788888999999999999999999998
Q ss_pred hcChhHHHHHhhcCCchhh-----------------------hcccCCCceeeeeeeeCC-----cceeEeccCCCCCCc
Q 039865 82 KGRPQAALILMERGVTILH-----------------------ACDDNGNTILHLAVLEKQ-----VEVFYMDFDGNNMDS 133 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~-----------------------~~~~~g~t~l~~a~~~~~-----~~~~~~L~~~~~~~~ 133 (148)
+.........+..|.+|++ ..+..|+||||+|+..+. .+++++|++.+. ++
T Consensus 93 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga-~~ 171 (201)
T 3hra_A 93 KHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA-DQ 171 (201)
T ss_dssp HHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC-CT
T ss_pred hccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC-CC
Confidence 5443332223333333333 336677788888877776 777777777544 67
Q ss_pred ccccCCCCCCCCCC
Q 039865 134 NIFYGCGLSGYGLS 147 (148)
Q Consensus 134 ~~~~~~~~~~~~~a 147 (148)
+..+..+.||+++|
T Consensus 172 ~~~~~~g~t~l~~A 185 (201)
T 3hra_A 172 SIKDNSGRTAMDYA 185 (201)
T ss_dssp TCCCTTSCCHHHHH
T ss_pred CccCCCCCCHHHHH
Confidence 77777777777654
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=3.4e-28 Score=156.69 Aligned_cols=142 Identities=20% Similarity=0.275 Sum_probs=80.4
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|++
T Consensus 21 ~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 98 (237)
T 3b7b_A 21 AGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYLLS 98 (237)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 45566666666666555 555555666666666666666666666665555 4555555566666665555566655555
Q ss_pred cChhHHHHHhh---------------------------------cCCchhhhc----------------------ccCCC
Q 039865 83 GRPQAALILME---------------------------------RGVTILHAC----------------------DDNGN 107 (148)
Q Consensus 83 ~~~~~~~~~~~---------------------------------~g~~~~~~~----------------------~~~g~ 107 (148)
.+.......+. .|.+|++.+ +..|.
T Consensus 99 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 178 (237)
T 3b7b_A 99 NGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGD 178 (237)
T ss_dssp TTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCC
T ss_pred CCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 43222222222 233333322 45566
Q ss_pred ceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 108 TILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 108 t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
||||+|+..++.+++++|++.+. +++..+..|.||+++|
T Consensus 179 t~L~~A~~~~~~~~v~~Ll~~ga-d~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 179 SPLHIAARENRYDCVVLFLSRDS-DVTLKNKEGETPLQCA 217 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTC-CTTCCCTTSCCHHHHS
T ss_pred CHHHHHHHhCCHhHHHHHHHcCC-CCCccCCCCCCHHHHH
Confidence 67777666666666666666543 5666666666666655
No 19
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=9.4e-28 Score=142.84 Aligned_cols=113 Identities=27% Similarity=0.319 Sum_probs=104.7
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 23 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll 100 (136)
T 2jab_A 23 RAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFIGHLEIAEVLL 100 (136)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999997 899999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDG 128 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 128 (148)
+.+.+ ++..+..|.||||+|+..++.+++++|++.
T Consensus 101 ~~g~~------------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 101 KHGAD------------VNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HcCCC------------CcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 96554 467789999999999999999999998864
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=1.4e-28 Score=161.86 Aligned_cols=145 Identities=21% Similarity=0.166 Sum_probs=114.1
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc----------------------------
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEM---------------------------- 53 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~---------------------------- 53 (148)
..|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|++.++..
T Consensus 54 ~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (282)
T 1oy3_D 54 ILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDS 132 (282)
T ss_dssp HHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------
T ss_pred HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcc
Confidence 468999999999999998 899999999999999999999999999987651
Q ss_pred ------------------cccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhc-------------
Q 039865 54 ------------------CFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHAC------------- 102 (148)
Q Consensus 54 ------------------~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~------------- 102 (148)
.+.++..|.||||+|+..|+.+++++|++.+.+........|.+|++.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 212 (282)
T 1oy3_D 133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLL 212 (282)
T ss_dssp -----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 2567889999999999999999999999976553332233477777655
Q ss_pred ---------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 103 ---------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 103 ---------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
+..|+||||+|+..++.+++++|++.+. +++..+..+.||++.|+
T Consensus 213 ~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 213 KAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA-PEPEDGGDKLSPCSSSG 266 (282)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTC-CCCCCC-----------
T ss_pred HcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCC-CcCcCCCcccccccccC
Confidence 7788999999999999999999998766 78888899999988763
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=1.3e-27 Score=154.08 Aligned_cols=143 Identities=17% Similarity=0.139 Sum_probs=83.9
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC----CccccCCCCCChHHHHHHHhCCHHHHH
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNP----EMCFARDIDGKNPLHIAAIRRHVNVLK 78 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~----~~~~~~~~~g~t~l~~a~~~~~~~~~~ 78 (148)
.|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.++ ++ +..+..|.||||+|+..++.++++
T Consensus 56 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~ 133 (241)
T 1k1a_A 56 TTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQ 133 (241)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred cCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHH
Confidence 34555555555555544 4445555555555555555555555555444 33 344455555555555555555555
Q ss_pred HHHhcChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccc
Q 039865 79 ELVKGRPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIF 136 (148)
Q Consensus 79 ~ll~~~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~ 136 (148)
+|++.+.+........|.+|++.+ +..|.||||+|+..++.+++++|++.+. +++..
T Consensus 134 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~ 212 (241)
T 1k1a_A 134 LLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA-DSSLK 212 (241)
T ss_dssp HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-CTTCC
T ss_pred HHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCC-CCCCc
Confidence 555533322111113344444443 6678888888888888888888888655 77888
Q ss_pred cCCCCCCCCCCC
Q 039865 137 YGCGLSGYGLSS 148 (148)
Q Consensus 137 ~~~~~~~~~~as 148 (148)
+..+.||+++|.
T Consensus 213 ~~~g~tpl~~A~ 224 (241)
T 1k1a_A 213 NCHNDTPLMVAR 224 (241)
T ss_dssp CTTSCCTTTTCS
T ss_pred CCCCCCHHHHHH
Confidence 888888888873
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=9e-28 Score=153.82 Aligned_cols=82 Identities=28% Similarity=0.244 Sum_probs=49.6
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFN--PEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
.|+.+++++|+++++++++..+..|.||||+|+..|+.+++++|++.+ .+.....+..|.||||+|+..++.+++++|
T Consensus 12 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 91 (228)
T 2dzn_A 12 ENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 91 (228)
T ss_dssp TTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred hCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 466666666666666654445666666666666666666666666666 333211555666666666666666666666
Q ss_pred HhcC
Q 039865 81 VKGR 84 (148)
Q Consensus 81 l~~~ 84 (148)
++.+
T Consensus 92 l~~g 95 (228)
T 2dzn_A 92 YDRP 95 (228)
T ss_dssp HSSS
T ss_pred HhCC
Confidence 6543
No 23
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=5.6e-28 Score=146.73 Aligned_cols=130 Identities=25% Similarity=0.280 Sum_probs=108.8
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++....++..+..|.||||+ +..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|+
T Consensus 11 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 88 (156)
T 1bd8_A 11 ARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLV 88 (156)
T ss_dssp HHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 46888999999988332338888889999999 8889999999999999888 788889999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|+||||+|+..|+.+++++|++. .+++..+..+.||+++|
T Consensus 89 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A 140 (156)
T 1bd8_A 89 EHGAD------------VNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELA 140 (156)
T ss_dssp HTTCC------------SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHH
T ss_pred HcCCC------------CCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHH
Confidence 86544 366688899999999999999999999887 47777778888887765
No 24
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=3.3e-28 Score=147.92 Aligned_cols=128 Identities=17% Similarity=0.118 Sum_probs=104.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCh-HHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKN-PLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~l 80 (148)
..|+.+++++|+++++++ +..+..|.||||+|+ .|+.+++++|+++|+++ +.++..|.| |||+|+..++.+++++|
T Consensus 21 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~~~~~~~~v~~L 97 (156)
T 1bi7_B 21 ARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVL 97 (156)
T ss_dssp HHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHHCCCHHHHHHH
Confidence 468999999999999997 899999999999985 89999999999999998 899999999 99999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCC
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYG 145 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 145 (148)
++.+++ ++..+..|.||||+|+..++.+++++|++.+. +++..+..+.++..
T Consensus 98 l~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 98 HRAGAR------------LDVRDAWGRLPVDLAEELGHRDVARYLRAAAG-GTRGSNHARIDAAE 149 (156)
T ss_dssp HHHTCC------------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHcCCC------------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC-CCCccCcCcCcccc
Confidence 996555 47778999999999999999999999999755 77777766666543
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=3.5e-28 Score=158.28 Aligned_cols=143 Identities=20% Similarity=0.194 Sum_probs=109.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+..++.+++++|+
T Consensus 66 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 144 (253)
T 1yyh_A 66 RYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 144 (253)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 467788888888888776 7777788888888888888888888888776333677777888888888887778888887
Q ss_pred hcChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCC
Q 039865 82 KGRPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGC 139 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 139 (148)
+.+.+ ++..+..|.+|++.+ +..|.||||+|+..++.+++++|++.+. +++..+..
T Consensus 145 ~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~ 222 (253)
T 1yyh_A 145 NSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA-NRDITDHM 222 (253)
T ss_dssp HTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTT
T ss_pred HcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CccccccC
Confidence 74432 233334455555544 7889999999999999999999999765 78888889
Q ss_pred CCCCCCCC
Q 039865 140 GLSGYGLS 147 (148)
Q Consensus 140 ~~~~~~~a 147 (148)
+.||+++|
T Consensus 223 g~tpl~~A 230 (253)
T 1yyh_A 223 DRLPRDIA 230 (253)
T ss_dssp CCCHHHHH
T ss_pred CCCHHHHH
Confidence 99998876
No 26
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=6.2e-28 Score=162.47 Aligned_cols=144 Identities=17% Similarity=0.117 Sum_probs=101.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC---HHHHHHHHhcC-CCccccCCCCCChHHHHHHH----hCC
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGY---LDIVLKLVSFN-PEMCFARDIDGKNPLHIAAI----RRH 73 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~---~~~~~~Ll~~~-~~~~~~~~~~g~t~l~~a~~----~~~ 73 (148)
..|+.++|++|+++|+++ +.++..|.||||+|+..|+ .++++.|++.+ +++ +.++..|.||||+|+. .++
T Consensus 140 ~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~-~~~d~~g~tpLh~A~~~~~~~g~ 217 (327)
T 1sw6_A 140 SIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL-ILEDSMNRTILHHIIITSGMTGC 217 (327)
T ss_dssp HTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG-GEECTTCCCHHHHHHHHHTSTTC
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccc-cCCCCCCCCHHHHHHHHcccccc
Confidence 356777777777777776 6777777777777777776 56666666665 344 6777777777777777 677
Q ss_pred HHHHHHHHhcC-------------------hhHHHHHhhcCCchh--------------hhcccCCCceeeeeeeeCCcc
Q 039865 74 VNVLKELVKGR-------------------PQAALILMERGVTIL--------------HACDDNGNTILHLAVLEKQVE 120 (148)
Q Consensus 74 ~~~~~~ll~~~-------------------~~~~~~~~~~g~~~~--------------~~~~~~g~t~l~~a~~~~~~~ 120 (148)
.+++++|++.. ...+...+..|.+|+ +..+..|+||||+|+..|+.+
T Consensus 218 ~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~ 297 (327)
T 1sw6_A 218 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNIS 297 (327)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHH
Confidence 77777777643 222333444555553 345789999999999999999
Q ss_pred eeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 121 VFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 121 ~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
++++|++.+. +++..+..|.||+++|.
T Consensus 298 ~v~~Ll~~Ga-d~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 298 IVDALLDYGA-DPFIANKSGLRPVDFGA 324 (327)
T ss_dssp HHHHHHHTTC-CTTCCCTTSCCGGGGTC
T ss_pred HHHHHHHcCC-CCcccCCCCCCHHHHHH
Confidence 9999998765 89999999999999984
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=157.38 Aligned_cols=144 Identities=18% Similarity=0.157 Sum_probs=96.6
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++++.++ +.++..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 68 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 145 (285)
T 3d9h_A 68 IHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLL 145 (285)
T ss_dssp HTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHH
Confidence 356777777777777665 667777777777777777777777777777766 566777777777777777777777776
Q ss_pred hcChhH-------------------------------HHHHhhcCCchhhhc---------------------ccCCCce
Q 039865 82 KGRPQA-------------------------------ALILMERGVTILHAC---------------------DDNGNTI 109 (148)
Q Consensus 82 ~~~~~~-------------------------------~~~~~~~g~~~~~~~---------------------~~~g~t~ 109 (148)
+.+.+. +...+..|.+|++.+ +..|.||
T Consensus 146 ~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~ 225 (285)
T 3d9h_A 146 QHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSP 225 (285)
T ss_dssp HTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCH
T ss_pred HCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCH
Confidence 643321 111122334444433 4567788
Q ss_pred eeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 110 LHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 110 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
||+|+..++.+++++|++.+. +++..+..|.||+++|.
T Consensus 226 L~~A~~~~~~~~v~~Ll~~ga-d~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 226 LHAVVRTASEELACLLMDFGA-DTQAKNAEGKRPVELVP 263 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCGGGGSC
T ss_pred HHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHhc
Confidence 888888888888888877544 77777777888887763
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=2.1e-27 Score=152.14 Aligned_cols=143 Identities=18% Similarity=0.183 Sum_probs=90.0
Q ss_pred CCcHHHHHHHHHhC--CccccccCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCccccCCCCCChHHHHHHHhCCHHHHH
Q 039865 3 LGHLDFVQEILRRK--PELAGALDSRKASPLHLAAAKGYLDIVLKLVSFN--PEMCFARDIDGKNPLHIAAIRRHVNVLK 78 (148)
Q Consensus 3 ~g~~~~v~~ll~~~--~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 78 (148)
.|+.+++++|++++ .++....+..|.||||+|+..|+.+++++|++.| +++ +..+..|.||||+|+..++.++++
T Consensus 46 ~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~ 124 (228)
T 2dzn_A 46 FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQ 124 (228)
T ss_dssp TTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHH
Confidence 45666666666666 4431225555666666666666666666666655 444 455556666666666666666666
Q ss_pred HHHhcChhHHHHHhhcCCchh-----------------------hhcccCCCceeeeeeeeCCcceeEecc-CCCCCCcc
Q 039865 79 ELVKGRPQAALILMERGVTIL-----------------------HACDDNGNTILHLAVLEKQVEVFYMDF-DGNNMDSN 134 (148)
Q Consensus 79 ~ll~~~~~~~~~~~~~g~~~~-----------------------~~~~~~g~t~l~~a~~~~~~~~~~~L~-~~~~~~~~ 134 (148)
+|++.+.+ +...+..|.+|+ +..+..|+||||+|+..++.+++++|+ +.+. +++
T Consensus 125 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga-~~~ 202 (228)
T 2dzn_A 125 FLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA-EYD 202 (228)
T ss_dssp HHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCC-CSC
T ss_pred HHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-CCC
Confidence 66653222 111222233333 444788999999999999999999999 5444 788
Q ss_pred cccCCCCCCCCCCC
Q 039865 135 IFYGCGLSGYGLSS 148 (148)
Q Consensus 135 ~~~~~~~~~~~~as 148 (148)
..+..|.||+++|.
T Consensus 203 ~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 203 LVDNKGAKAEDVAL 216 (228)
T ss_dssp CBCTTSCBGGGGCS
T ss_pred ccCCCCCcHHHHHH
Confidence 88888899988873
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=1.2e-27 Score=152.82 Aligned_cols=143 Identities=20% Similarity=0.194 Sum_probs=102.1
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+..++.+++++|+
T Consensus 34 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 112 (223)
T 2f8y_A 34 RYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 112 (223)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHH
Confidence 467788888888888776 7777888888888888888888888888776333677778888888888888888888888
Q ss_pred hcChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCC
Q 039865 82 KGRPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGC 139 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 139 (148)
+.+.+ +...+..|.+|++.+ +..|.||||+|+..++.+++++|++.+. +++..+..
T Consensus 113 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~ 190 (223)
T 2f8y_A 113 NSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA-NRDITDHM 190 (223)
T ss_dssp HTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTT
T ss_pred HcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC-CCcccccc
Confidence 74433 222233344444433 6677788888888888888888777654 66666667
Q ss_pred CCCCCCCC
Q 039865 140 GLSGYGLS 147 (148)
Q Consensus 140 ~~~~~~~a 147 (148)
+.+|+++|
T Consensus 191 g~t~l~~A 198 (223)
T 2f8y_A 191 DRLPRDIA 198 (223)
T ss_dssp CCCHHHHH
T ss_pred CCCHHHHH
Confidence 77776654
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=9.3e-29 Score=158.01 Aligned_cols=142 Identities=21% Similarity=0.251 Sum_probs=119.7
Q ss_pred CcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhc
Q 039865 4 GHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKG 83 (148)
Q Consensus 4 g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 83 (148)
|+.+++++|+++++++.+..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|++.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 77889999999999986666899999999999999999999999999998 78999999999999999999999999997
Q ss_pred ChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCC
Q 039865 84 RPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGL 141 (148)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 141 (148)
+.......+..|.+|++.+ +..|.||||+|+..++.+++++|++.+. +++..+..+.
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~ 159 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA-NKDMQNNREE 159 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCc
Confidence 6644444455566665544 6778999999999999999999998644 7888888888
Q ss_pred CCCCCC
Q 039865 142 SGYGLS 147 (148)
Q Consensus 142 ~~~~~a 147 (148)
||+++|
T Consensus 160 t~L~~A 165 (223)
T 2f8y_A 160 TPLFLA 165 (223)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 888765
No 31
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=8.9e-28 Score=154.16 Aligned_cols=143 Identities=25% Similarity=0.273 Sum_probs=119.3
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+++.+++|++.++...+..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 15 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 93 (231)
T 3aji_A 15 YSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALL 93 (231)
T ss_dssp HHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHH
Confidence 4689999999999998877889999999999999999999999999999998 789999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCC
Q 039865 82 KGRPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGC 139 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 139 (148)
+.+.+ +...+..|.+|++.+ +..|.||||+|+..++.+++++|++.+. +++..+..
T Consensus 94 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~ 171 (231)
T 3aji_A 94 VKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA-STNIQDTE 171 (231)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCCTT
T ss_pred HcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CccccCCC
Confidence 96543 223334455555543 6678888888888888888888887544 67777777
Q ss_pred CCCCCCCC
Q 039865 140 GLSGYGLS 147 (148)
Q Consensus 140 ~~~~~~~a 147 (148)
+.||+++|
T Consensus 172 g~t~L~~A 179 (231)
T 3aji_A 172 GNTPLHLA 179 (231)
T ss_dssp SCCHHHHH
T ss_pred CCCHHHHH
Confidence 88877654
No 32
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.6e-27 Score=153.30 Aligned_cols=112 Identities=22% Similarity=0.244 Sum_probs=98.5
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +.++..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 30 ~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll 107 (229)
T 2vge_A 30 LTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCNDTVICMALV 107 (229)
T ss_dssp HHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999997 899999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcc-cCCCceeeee--eeeCCcceeEeccC
Q 039865 82 KGRPQAALILMERGVTILHACD-DNGNTILHLA--VLEKQVEVFYMDFD 127 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~L~~ 127 (148)
+.+++ ++..+ ..|+||||+| +..++.+++++|++
T Consensus 108 ~~ga~------------~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 108 QHGAA------------IFATTLSDGATAFEKCDPYREGYADCATYLAD 144 (229)
T ss_dssp TTTCC------------TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH
T ss_pred HcCCC------------cccccCCCCCCHHHHHHHHhcChHHHHHHHHH
Confidence 96655 24443 5788888888 77777777777765
No 33
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.6e-26 Score=140.30 Aligned_cols=113 Identities=27% Similarity=0.362 Sum_probs=104.7
Q ss_pred CCCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 1 SLLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 1 a~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
|..|+.+++++|+++++++ +.++..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|
T Consensus 43 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (156)
T 1bd8_A 43 MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFL 120 (156)
T ss_dssp SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHH
Confidence 4679999999999999998 999999999999999999999999999999998 88999999999999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCC
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDG 128 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 128 (148)
++. .+ ++..+..|.||||+|+..++.+++++|+++
T Consensus 121 l~~-~~------------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 121 AAE-SD------------LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HTT-SC------------TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred Hhc-cC------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 985 33 467789999999999999999999998864
No 34
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=5.9e-28 Score=143.71 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=103.8
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCC-CChHHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDID-GKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~l 80 (148)
..|+.+++++|++++.++ +.++..|.||||+|+. ++.+++++|+++|+++ +.++.. |.||||+|+..++.+++++|
T Consensus 21 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~L 97 (136)
T 1d9s_A 21 ARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVL 97 (136)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHHHTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 478999999999999997 8999999999999999 9999999999999998 788998 99999999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCC
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGN 129 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~ 129 (148)
++.+++ ++..+..|.||||+|+..++.+++++|++.+
T Consensus 98 l~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 98 HRAGAR------------LDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHTCCC------------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHcCCC------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 996555 4677899999999999999999999998754
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=3.3e-27 Score=152.13 Aligned_cols=81 Identities=25% Similarity=0.277 Sum_probs=43.9
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-----cccCCCCCChHHHHHHHhCCHHHH
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEM-----CFARDIDGKNPLHIAAIRRHVNVL 77 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~ 77 (148)
.|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|++.++++ ....+..|.||||+|+..++.+++
T Consensus 55 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 133 (236)
T 1ikn_D 55 TNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIV 133 (236)
T ss_dssp TTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHH
Confidence 45555555555555554 555555555555555555555555555554321 234455555555555555555555
Q ss_pred HHHHhcC
Q 039865 78 KELVKGR 84 (148)
Q Consensus 78 ~~ll~~~ 84 (148)
++|++.+
T Consensus 134 ~~Ll~~g 140 (236)
T 1ikn_D 134 ELLVSLG 140 (236)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 5555533
No 36
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=8.6e-27 Score=157.36 Aligned_cols=82 Identities=26% Similarity=0.271 Sum_probs=76.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +.++..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++.+++++|+
T Consensus 67 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 144 (351)
T 3utm_A 67 GYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLL 144 (351)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 478999999999999997 899999999999999999999999999999998 788999999999999999999999999
Q ss_pred hcCh
Q 039865 82 KGRP 85 (148)
Q Consensus 82 ~~~~ 85 (148)
+.+.
T Consensus 145 ~~g~ 148 (351)
T 3utm_A 145 SHGA 148 (351)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 8644
No 37
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=2.8e-26 Score=140.44 Aligned_cols=114 Identities=21% Similarity=0.218 Sum_probs=103.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 51 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 128 (165)
T 3twr_A 51 GYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLL 128 (165)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 478999999999999998 999999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
+.+.+ .+..+..|.||+++|+. ++.+++++|++.++
T Consensus 129 ~~ga~------------~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 129 QHGAD------------PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HTTCC------------TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HcCCC------------CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 96554 47779999999999877 88999999998664
No 38
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=4.8e-27 Score=150.93 Aligned_cols=143 Identities=18% Similarity=0.187 Sum_probs=114.9
Q ss_pred CCCcHHHHHHHHHh-CCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc----ccCCCCCChHHHHHHHhCCHHH
Q 039865 2 LLGHLDFVQEILRR-KPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMC----FARDIDGKNPLHIAAIRRHVNV 76 (148)
Q Consensus 2 ~~g~~~~v~~ll~~-~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~----~~~~~~g~t~l~~a~~~~~~~~ 76 (148)
..|+.+++++|+++ +.++ +.++..|.||||+|+..|+.+++++|++.+++.. ...+..|.||||+|+..++.++
T Consensus 12 ~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 90 (232)
T 2rfa_A 12 KENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNL 90 (232)
T ss_dssp HTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHH
Confidence 57899999999998 7776 9999999999999999999999999999998752 3456789999999999999999
Q ss_pred HHHHHhcChhHHHHHh--hcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 77 LKELVKGRPQAALILM--ERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 77 ~~~ll~~~~~~~~~~~--~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+++|++.+.+...... ..... .+..+..|.||||+|+..|+.+++++|++.+. +++..+..+.||+++|
T Consensus 91 v~~Ll~~g~~~~~~~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 91 VRALLARGASVSARATGSVFHYR-PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA-DIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHHHHTTCCTTCCCCSGGGSCC-TTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred HHHHHhCCCCCCcccCCcceeec-ccccccCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHH
Confidence 9999996654211000 00000 11224479999999999999999999998755 8888888888988765
No 39
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=4.4e-27 Score=144.91 Aligned_cols=126 Identities=24% Similarity=0.218 Sum_probs=108.6
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 45 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 122 (172)
T 3v30_A 45 AFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALL 122 (172)
T ss_dssp HTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 478999999999999998 899999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLS 142 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 142 (148)
+.+++ ++..+..|.||||+|+..++.+++++|++.+. +....+..+.+
T Consensus 123 ~~ga~------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~-~~~~~~~~~~~ 170 (172)
T 3v30_A 123 ARGAD------------LTTEADSGYTPMDLAVALGYRKVQQVIENHIL-KLFQSNLVPAD 170 (172)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH-HHSCC------
T ss_pred HcCCC------------ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH-HHhcccCCCCC
Confidence 96554 46778999999999999999999999998544 44444444433
No 40
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=3.4e-26 Score=139.55 Aligned_cols=115 Identities=28% Similarity=0.373 Sum_probs=105.2
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|+++++++ +.++..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++
T Consensus 47 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 124 (162)
T 1ihb_A 47 LGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVK 124 (162)
T ss_dssp SSCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 38999999999999998 899999999999999999999999999999998 8899999999999999999999999998
Q ss_pred cChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 83 GRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
.+.+ +++..+..|.||||+|+..++.+++++|++.++
T Consensus 125 ~g~~-----------~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 125 HTAS-----------NVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HSCC-----------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred ccCC-----------CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 5443 346778899999999999999999999998654
No 41
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=6.3e-27 Score=150.94 Aligned_cols=143 Identities=23% Similarity=0.288 Sum_probs=119.9
Q ss_pred CCCcHHHHHHHHH----hCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHH
Q 039865 2 LLGHLDFVQEILR----RKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVL 77 (148)
Q Consensus 2 ~~g~~~~v~~ll~----~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 77 (148)
..|+.+++++|++ .+.++ +..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++
T Consensus 18 ~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~ 95 (241)
T 1k1a_A 18 VQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCL 95 (241)
T ss_dssp HTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHH
Confidence 5799999999997 56666 899999999999999999999999999999998 78899999999999999999999
Q ss_pred HHHHhcChh---HHHHHhhcCCchhhhc----------------------c-cCCCceeeeeeeeCCcceeEeccCCCCC
Q 039865 78 KELVKGRPQ---AALILMERGVTILHAC----------------------D-DNGNTILHLAVLEKQVEVFYMDFDGNNM 131 (148)
Q Consensus 78 ~~ll~~~~~---~~~~~~~~g~~~~~~~----------------------~-~~g~t~l~~a~~~~~~~~~~~L~~~~~~ 131 (148)
++|++.+.. .....+..|.+|++.+ + ..|.||||+|+..++.+++++|++.+.
T Consensus 96 ~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~- 174 (241)
T 1k1a_A 96 RALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA- 174 (241)
T ss_dssp HHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-
T ss_pred HHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCC-
Confidence 999986542 2233344556665544 3 678999999999999999999998654
Q ss_pred CcccccCCCCCCCCCC
Q 039865 132 DSNIFYGCGLSGYGLS 147 (148)
Q Consensus 132 ~~~~~~~~~~~~~~~a 147 (148)
+++..+..+.||+++|
T Consensus 175 ~~~~~~~~g~t~L~~A 190 (241)
T 1k1a_A 175 NVNAQMYSGSSALHSA 190 (241)
T ss_dssp CTTCBCTTSCBHHHHH
T ss_pred CCCCcCCCCCCHHHHH
Confidence 7888888888888765
No 42
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=2.7e-26 Score=136.64 Aligned_cols=112 Identities=21% Similarity=0.238 Sum_probs=70.8
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|++.++++ +.++..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++
T Consensus 20 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 97 (137)
T 3c5r_A 20 KGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAAKNGHVDIVKLLLS 97 (137)
T ss_dssp HTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45666666666666665 666666666666666666666666666666665 5666666666666666666666666666
Q ss_pred cChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCC
Q 039865 83 GRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDG 128 (148)
Q Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 128 (148)
.+++ ++..+..|.||+++|+..+..+++++|.+.
T Consensus 98 ~ga~------------~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 98 YGAS------------RNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp TTCC------------TTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred cCCC------------CCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 4433 255566666666666666666666665543
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=3e-26 Score=147.22 Aligned_cols=133 Identities=23% Similarity=0.326 Sum_probs=113.9
Q ss_pred CCCcHHHHHHHHHhCCccc----cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCC-------------CCChH
Q 039865 2 LLGHLDFVQEILRRKPELA----GALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDI-------------DGKNP 64 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~----~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~-------------~g~t~ 64 (148)
..|+.+++++|++.++++. +..+..|.||||+|+..|+.+++++|++.|+++ +..+. .|.||
T Consensus 46 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~ 124 (232)
T 2rfa_A 46 LYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHP 124 (232)
T ss_dssp HTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSH
T ss_pred HcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCH
Confidence 4789999999999998863 445678999999999999999999999999988 56554 79999
Q ss_pred HHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCccee----EeccCCCCCCc-----cc
Q 039865 65 LHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVF----YMDFDGNNMDS-----NI 135 (148)
Q Consensus 65 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~----~~L~~~~~~~~-----~~ 135 (148)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+..++.+++ ++|++.+.... +.
T Consensus 125 L~~A~~~~~~~~v~~Ll~~ga~------------~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~ 192 (232)
T 2rfa_A 125 LSFAACVGSEEIVRLLIEHGAD------------IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELV 192 (232)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGC
T ss_pred HHHHHHcCCHHHHHHHHHCCCC------------CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhcc
Confidence 9999999999999999996655 477799999999999999999988 88988655221 46
Q ss_pred ccCCCCCCCCCC
Q 039865 136 FYGCGLSGYGLS 147 (148)
Q Consensus 136 ~~~~~~~~~~~a 147 (148)
.+..+.||+++|
T Consensus 193 ~~~~g~tpl~~A 204 (232)
T 2rfa_A 193 PNNQGLTPFKLA 204 (232)
T ss_dssp CCTTSCCHHHHH
T ss_pred CCCCCCCHHHHH
Confidence 777888888776
No 44
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2e-26 Score=134.97 Aligned_cols=115 Identities=35% Similarity=0.540 Sum_probs=105.5
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..++.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 11 ~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll 88 (126)
T 1n0r_A 11 RNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLL 88 (126)
T ss_dssp HHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 468999999999999997 889999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
+.+.+ ++..+..|.|||++|+..++.+++++|++.++
T Consensus 89 ~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 89 EAGAD------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HcCCC------------CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 96554 46678899999999999999999999997543
No 45
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=152.37 Aligned_cols=124 Identities=19% Similarity=0.184 Sum_probs=79.2
Q ss_pred cccCCCCCcHHHHHHHcCCH-HHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChh-------------
Q 039865 21 GALDSRKASPLHLAAAKGYL-DIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQ------------- 86 (148)
Q Consensus 21 ~~~~~~g~~~l~~a~~~g~~-~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~------------- 86 (148)
+..+..|.|||++|+..+.. .+++.|++.|+++ +.+|..|.||||+|+..|+.+++++|++.+++
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~ 124 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLH 124 (269)
T ss_dssp -----------------------------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccc
Confidence 66788899999999988775 4789999999998 89999999999999999999999999985542
Q ss_pred ---------HHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 87 ---------AALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 87 ---------~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
........|..+ +..|..|+||||+|+..|+.+++++|++.+. +++..+..|.||+++|
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga-dvn~~~~~g~t~Lh~A 192 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHELVALLLQHGA-SINASNNKGNTALHEA 192 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTC-CTTCBCTTSCBHHHHH
T ss_pred cccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CCCccccCCCcHHHHH
Confidence 222233344443 4558899999999999999999999998655 8888888899998876
No 46
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=1.2e-26 Score=156.48 Aligned_cols=144 Identities=24% Similarity=0.276 Sum_probs=105.3
Q ss_pred CCCcHHHHHHHHHhCCccccccCC-CCCcHHHHHHHcCCHHHHHHHHhcCCCcc--------------------------
Q 039865 2 LLGHLDFVQEILRRKPELAGALDS-RKASPLHLAAAKGYLDIVLKLVSFNPEMC-------------------------- 54 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~-~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~-------------------------- 54 (148)
..|++++|+.|+++|+++ +.++. .|+||||+|+..|+.+++++|+++|+++.
T Consensus 34 ~~g~~~~V~~LL~~Gadv-n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (337)
T 4g8k_A 34 QNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFL 112 (337)
T ss_dssp HTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhh
Confidence 579999999999999998 76654 59999999999999999999999876541
Q ss_pred ------ccCCC-------------------------------------------CCChHHHHHHHhCCHHHHHHHHhcCh
Q 039865 55 ------FARDI-------------------------------------------DGKNPLHIAAIRRHVNVLKELVKGRP 85 (148)
Q Consensus 55 ------~~~~~-------------------------------------------~g~t~l~~a~~~~~~~~~~~ll~~~~ 85 (148)
+..+. .|.||||+|+..|+.+++++|++..+
T Consensus 113 ~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~g 192 (337)
T 4g8k_A 113 SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 192 (337)
T ss_dssp TTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSC
T ss_pred hccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Confidence 12223 35566666666677777777664211
Q ss_pred h---------------------------HHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccC
Q 039865 86 Q---------------------------AALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYG 138 (148)
Q Consensus 86 ~---------------------------~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~ 138 (148)
. ......+.|..+ +..+..|+||||+|+..++.+++++|++..+.+++..+.
T Consensus 193 ad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~ 271 (337)
T 4g8k_A 193 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271 (337)
T ss_dssp CCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCT
T ss_pred CCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCC
Confidence 1 111222334433 444778899999999999999999888866668888888
Q ss_pred CCCCCCCCC
Q 039865 139 CGLSGYGLS 147 (148)
Q Consensus 139 ~~~~~~~~a 147 (148)
.|.||+++|
T Consensus 272 ~G~TpL~~A 280 (337)
T 4g8k_A 272 DGKTALLLA 280 (337)
T ss_dssp TSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 888888776
No 47
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=4.8e-26 Score=135.52 Aligned_cols=113 Identities=21% Similarity=0.253 Sum_probs=99.4
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhh
Q 039865 22 ALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHA 101 (148)
Q Consensus 22 ~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~ 101 (148)
.++..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++.+.+ ++.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------~~~ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL------------VNT 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------TTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc------------ccC
Confidence 57889999999999999999999999999998 88999999999999999999999999996554 467
Q ss_pred cccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 102 CDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 102 ~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
.+..|+||||+|+..++.+++++|++.+.. ++..+..+.||+++|.
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTD 117 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHh
Confidence 789999999999999999999999984443 3455667888888773
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=1.5e-25 Score=144.31 Aligned_cols=134 Identities=20% Similarity=0.159 Sum_probs=115.8
Q ss_pred CCCcHHHHHHHHHhCCcc-----ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCC-CCChHHHHHHHhCCHH
Q 039865 2 LLGHLDFVQEILRRKPEL-----AGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDI-DGKNPLHIAAIRRHVN 75 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~-----~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~ 75 (148)
..|+.+++++|++.++++ ++..+..|.||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+..++.+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHH
Confidence 468899999999998642 4778889999999999999999999999999998 77776 9999999999999999
Q ss_pred HHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCC-CcccccCCCCCCCCCCC
Q 039865 76 VLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNM-DSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 76 ~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~-~~~~~~~~~~~~~~~as 148 (148)
++++|++.+++ ++..+..|.||||+|+..++.+++++|++.+.. .....+..+.++++.+|
T Consensus 166 ~v~~Ll~~ga~------------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 166 LVSLLLKCGAD------------VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp HHHHHHTTTCC------------SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-
T ss_pred HHHHHHHcCCC------------CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhc
Confidence 99999996555 477789999999999999999999999996652 33467778888887764
No 49
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=7.2e-26 Score=139.21 Aligned_cols=113 Identities=28% Similarity=0.459 Sum_probs=105.0
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 56 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 56 FNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999997 899999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDG 128 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 128 (148)
+.+.+ ++..+..|.||+++|+..++.+++++|++.
T Consensus 134 ~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 134 KNGAD------------VNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HcCCC------------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 96554 467789999999999999999999999874
No 50
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1.1e-25 Score=131.70 Aligned_cols=105 Identities=23% Similarity=0.223 Sum_probs=95.0
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++.++++ +..+..|.||||+|+..++.+++++|++.|+++ +.+|..|.||||+|+..++.+++++|+
T Consensus 16 ~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll 93 (123)
T 3aaa_C 16 KNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEGHVSCVKLLL 93 (123)
T ss_dssp HTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 478999999999999997 899999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcc
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVE 120 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~ 120 (148)
+.+++ ++..+..|.||+|+|...+..+
T Consensus 94 ~~ga~------------~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 94 SKGAD------------KTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHCCCHHHHH
T ss_pred HcCCC------------CCCcCCCCCCHHHHhCCHHHHH
Confidence 96555 4777899999999996654443
No 51
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=1.1e-26 Score=153.03 Aligned_cols=133 Identities=20% Similarity=0.212 Sum_probs=104.7
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHH-----HcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAA-----AKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNV 76 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~-----~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 76 (148)
..|+.+++++|++.++..++..+..|.||||+|+ ..++.+++++|++.|.+. ...+..|.||||+|+..|+.++
T Consensus 120 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~ 198 (276)
T 4hbd_A 120 SHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDV 198 (276)
T ss_dssp HTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHH
T ss_pred HCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHH
Confidence 3577788888888877333777777788888777 456677777777777666 6677788888888888888888
Q ss_pred HHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 77 LKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 77 ~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+++|++.+++ ++..|..|+||||+|+..|+.+++++|++..+.+++..+..|.||+++|
T Consensus 199 v~~Ll~~gad------------~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A 257 (276)
T 4hbd_A 199 VKALLACEAD------------VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVA 257 (276)
T ss_dssp HHHHHHTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHhCCCC------------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHH
Confidence 8888886554 4677889999999999999999999999844558888888888888765
No 52
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=5.8e-26 Score=137.50 Aligned_cols=110 Identities=23% Similarity=0.299 Sum_probs=101.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++.++++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 43 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 43 QYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp HHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999998 899999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEec
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMD 125 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 125 (148)
+.+++ ++..+..|.||+++|+..|+.+++++|
T Consensus 121 ~~ga~------------~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 121 KYGAD------------VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCC------------ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 96555 467789999999999999999998876
No 53
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=2.2e-26 Score=159.91 Aligned_cols=141 Identities=23% Similarity=0.268 Sum_probs=91.6
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|++.++++ +..+..|.||||+|+..|+.+++++|++.+++. +..+..|.||||+|+..++.+++++|++
T Consensus 222 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 299 (437)
T 1n11_A 222 QNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIK 299 (437)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 45666666666666665 555666666666666666666666666666665 5556666666666666666666666665
Q ss_pred cChhHHHHHhhcCCchh----------------------hhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCC
Q 039865 83 GRPQAALILMERGVTIL----------------------HACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCG 140 (148)
Q Consensus 83 ~~~~~~~~~~~~g~~~~----------------------~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~ 140 (148)
.+.+ ++..+..|.+|+ +..+..|+||||+|+..|+.+++++|++.+. +++..+..+
T Consensus 300 ~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga-~~~~~~~~g 377 (437)
T 1n11_A 300 HGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA-SPNEVSSDG 377 (437)
T ss_dssp HTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CSCCCCSSS
T ss_pred CCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcC-CCCCCCCCC
Confidence 3322 111222233333 4447788899999999999999999988655 788888888
Q ss_pred CCCCCCC
Q 039865 141 LSGYGLS 147 (148)
Q Consensus 141 ~~~~~~a 147 (148)
.||+++|
T Consensus 378 ~t~l~~A 384 (437)
T 1n11_A 378 TTPLAIA 384 (437)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 8888765
No 54
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=1.6e-25 Score=138.85 Aligned_cols=119 Identities=24% Similarity=0.319 Sum_probs=108.5
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 48 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 48 REGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999998 899999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCccc
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNI 135 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~ 135 (148)
+.+++ ++..+..|.||+++|+..++.+++++|++.+. +++.
T Consensus 126 ~~ga~------------~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~-~~~~ 166 (179)
T 3f6q_A 126 ANGAL------------VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ-NLNR 166 (179)
T ss_dssp HTTCC------------SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC-CCSC
T ss_pred HCCCC------------cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc-Cccc
Confidence 96555 47789999999999999999999999998554 4443
No 55
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=2.8e-26 Score=150.87 Aligned_cols=142 Identities=21% Similarity=0.184 Sum_probs=75.5
Q ss_pred CcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccC----------CCCCChHHHHHHHhCC
Q 039865 4 GHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFAR----------DIDGKNPLHIAAIRRH 73 (148)
Q Consensus 4 g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~----------~~~g~t~l~~a~~~~~ 73 (148)
|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.|+++ +.. +..|.||||+|+..++
T Consensus 83 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 160 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGH 160 (285)
T ss_dssp TCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc-ccccccHHHHHhhccCCCcHHHHHHHcCC
Confidence 4444444444444443 444444444444444444444444444444443 222 3444555555555555
Q ss_pred HHHHHHHHhcChhHHHHHhhcCCchhh--------------------------hcccCCCceeeeeeeeCCcceeEeccC
Q 039865 74 VNVLKELVKGRPQAALILMERGVTILH--------------------------ACDDNGNTILHLAVLEKQVEVFYMDFD 127 (148)
Q Consensus 74 ~~~~~~ll~~~~~~~~~~~~~g~~~~~--------------------------~~~~~g~t~l~~a~~~~~~~~~~~L~~ 127 (148)
.+++++|++..+..+...+..|.+|++ ..+..|+||||+|+..++.+++++|++
T Consensus 161 ~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 161 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp HHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 555555554311111111222333332 235677888888888888888888887
Q ss_pred CCCCCcccccCCCCCCCCCC
Q 039865 128 GNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~a 147 (148)
..+.+++..+..+.||+++|
T Consensus 241 ~~g~~~~~~~~~g~t~l~~A 260 (285)
T 1wdy_A 241 QEHIEINDTDSDGKTALLLA 260 (285)
T ss_dssp SSSCCTTCCCTTSCCHHHHH
T ss_pred ccCCCccccCCCCCcHHHHH
Confidence 44557777777777777665
No 56
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=4.8e-26 Score=147.14 Aligned_cols=113 Identities=28% Similarity=0.287 Sum_probs=89.6
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.++++.|+++++++ +.++..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..++.+++++|+
T Consensus 46 ~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 46 LEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp HHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 357788888888888876 788888888888888888888888888888887 778888888888888888888888888
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCC-ceeeee--eeeCCcceeEeccCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGN-TILHLA--VLEKQVEVFYMDFDG 128 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~-t~l~~a--~~~~~~~~~~~L~~~ 128 (148)
+.+++ ++..+..|. ||+|+| +..|+.+++++|++.
T Consensus 124 ~~ga~------------~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 124 ESGAA------------VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp HTTCC------------TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred HcCCC------------cceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 85544 355555555 888888 677888888888763
No 57
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.9e-26 Score=149.03 Aligned_cols=130 Identities=17% Similarity=0.113 Sum_probs=96.0
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+.++.|+++|.++ +. +..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|+
T Consensus 14 ~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll 90 (239)
T 1ycs_B 14 RTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLV 90 (239)
T ss_dssp -------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred hhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 467889999999999997 54 367899999999999999999999999988 899999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCC-CCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGL-SGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~-~~~~~a 147 (148)
+.+.+ ++..|..|+||||+|+..++.+++++|++.+. +++..+..+. ||+++|
T Consensus 91 ~~ga~------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 91 QFGVN------------VNAADSDGWTPLHCAASCNNVQVCKFLVESGA-AVFAMTYSDMQTAADKC 144 (239)
T ss_dssp HHTCC------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCSSSCCCHHHHC
T ss_pred HcCCC------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CcceecCCCCcchHHHH
Confidence 96555 47779999999999999999999999998655 7777776655 777765
No 58
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=2e-26 Score=160.14 Aligned_cols=140 Identities=27% Similarity=0.374 Sum_probs=87.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|++++|++|+++++++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|+
T Consensus 23 ~~g~~~~v~~Ll~~g~~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll 100 (437)
T 1n11_A 23 FMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIGHTNMVKLLL 100 (437)
T ss_dssp HHTCHHHHHHHHHTTCCS-CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 357777777777777776 677777777777777777777777777777776 677777777777777777777777777
Q ss_pred hcChhHHHHHhhcCCchhhhc----------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCC
Q 039865 82 KGRPQAALILMERGVTILHAC----------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGC 139 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~----------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 139 (148)
+.+++ +...+..|.+|++.+ +..|.||||+|+..|+.+++++|++.+. +++..+..
T Consensus 101 ~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~ 178 (437)
T 1n11_A 101 ENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA-HPNAAGKN 178 (437)
T ss_dssp HHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCSS
T ss_pred hCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCC
Confidence 75432 122223344444332 3445555555555555555555555332 44444444
Q ss_pred CCCCCC
Q 039865 140 GLSGYG 145 (148)
Q Consensus 140 ~~~~~~ 145 (148)
+.+|++
T Consensus 179 g~t~L~ 184 (437)
T 1n11_A 179 GLTPLH 184 (437)
T ss_dssp CCCHHH
T ss_pred CCCHHH
Confidence 444443
No 59
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=3e-26 Score=147.40 Aligned_cols=142 Identities=23% Similarity=0.294 Sum_probs=90.3
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|+++++++....+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|++
T Consensus 52 ~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 130 (240)
T 3eu9_A 52 NNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIA 130 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHh
Confidence 455566666666665553344444566666666666666666666666655 5556666666666666666666666666
Q ss_pred cChhHHHHHhhcCCchhhhc-----------------------c-cCCCceeeeeeeeCCcceeEeccCCCCCCcccccC
Q 039865 83 GRPQAALILMERGVTILHAC-----------------------D-DNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYG 138 (148)
Q Consensus 83 ~~~~~~~~~~~~g~~~~~~~-----------------------~-~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~ 138 (148)
.+.+ +...+..|.+|++.+ + ..|.||||+|+..++.+++++|++.+. +++..+.
T Consensus 131 ~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~ 208 (240)
T 3eu9_A 131 KGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA-NVDAQNI 208 (240)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCBCT
T ss_pred cCCC-ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCcCC
Confidence 4322 222233445554433 3 378899999999999999999998654 7788888
Q ss_pred CCCCCCCCC
Q 039865 139 CGLSGYGLS 147 (148)
Q Consensus 139 ~~~~~~~~a 147 (148)
.+.+|+++|
T Consensus 209 ~g~t~l~~A 217 (240)
T 3eu9_A 209 KGESALDLA 217 (240)
T ss_dssp TSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 888888765
No 60
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=1.5e-26 Score=150.72 Aligned_cols=130 Identities=26% Similarity=0.299 Sum_probs=112.9
Q ss_pred CCcHHHHHHHHHhCCccccc-----------cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCC-----------
Q 039865 3 LGHLDFVQEILRRKPELAGA-----------LDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDID----------- 60 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~-----------~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~----------- 60 (148)
.|+.+++++|++.++++ +. .+..|.||||+|+..|+.+++++|++.|+++ +.++..
T Consensus 56 ~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 133 (256)
T 2etb_A 56 DGVNACIMPLLQIDKDS-GNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCF 133 (256)
T ss_dssp TTBCTTHHHHHHHHHHT-TCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCC
T ss_pred cchHHHHHHHHhcCCcc-cchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Ccccccccccccccccc
Confidence 38999999999998876 32 2467999999999999999999999999998 677775
Q ss_pred --CChHHHHHHHhCCHHHHHHHHh---cChhHHHHHhhcCCchhhhcccCCCceeeeeee--eCCcc-------eeEecc
Q 039865 61 --GKNPLHIAAIRRHVNVLKELVK---GRPQAALILMERGVTILHACDDNGNTILHLAVL--EKQVE-------VFYMDF 126 (148)
Q Consensus 61 --g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~L~ 126 (148)
|.||||+|+..|+.+++++|++ .+.+ ++..|..|+||||+|+. .++.+ ++++|+
T Consensus 134 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------------~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll 201 (256)
T 2etb_A 134 YFGELPLSLAACTKQWDVVTYLLENPHQPAS------------LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL 201 (256)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHH
Confidence 9999999999999999999999 5555 47789999999999998 78887 999999
Q ss_pred CCCCCCc-------ccccCCCCCCCCCC
Q 039865 127 DGNNMDS-------NIFYGCGLSGYGLS 147 (148)
Q Consensus 127 ~~~~~~~-------~~~~~~~~~~~~~a 147 (148)
+.+. ++ +..+..+.||+++|
T Consensus 202 ~~ga-~~~~~~~~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 202 QMGA-RLCPTVQLEEISNHQGLTPLKLA 228 (256)
T ss_dssp HHHH-HHSTTCCGGGCCCTTSCCHHHHH
T ss_pred HcCC-CcccccccccccCCCCCCHHHHH
Confidence 8654 56 77888899998876
No 61
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=7.4e-26 Score=148.69 Aligned_cols=136 Identities=18% Similarity=0.156 Sum_probs=105.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCC--------------CCCcHHHHHHHcCCHHHHHHHHh---cCCCccccCCCCCChH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDS--------------RKASPLHLAAAKGYLDIVLKLVS---FNPEMCFARDIDGKNP 64 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~--------------~g~~~l~~a~~~g~~~~~~~Ll~---~~~~~~~~~~~~g~t~ 64 (148)
..|+.+++++|+++++++ +..+. .|.||||+|+..|+.+++++|++ .|+++ +.+|..|.||
T Consensus 110 ~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tp 187 (273)
T 2pnn_A 110 ERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTV 187 (273)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCH
T ss_pred HcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcH
Confidence 468999999999999998 77776 79999999999999999999999 89998 8999999999
Q ss_pred HHHHHHhCC---------HHHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCccc
Q 039865 65 LHIAAIRRH---------VNVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNI 135 (148)
Q Consensus 65 l~~a~~~~~---------~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~ 135 (148)
||+|+..++ .+++++|++.+++. .......+..+..|+||||+|+..|+.+++++|++.++.++..
T Consensus 188 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~-----n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 188 LHALVEVADNTVDNTKFVTSMYNEILILGAKL-----HPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC----
T ss_pred HHHHHHccCcchhHHHHHHHHHHHHHHhhhhc-----ccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh
Confidence 999999988 78999999865542 0011112357899999999999999999999999977767777
Q ss_pred ccCCCCCCC
Q 039865 136 FYGCGLSGY 144 (148)
Q Consensus 136 ~~~~~~~~~ 144 (148)
....+..|.
T Consensus 263 ~~~~~~~~~ 271 (273)
T 2pnn_A 263 RHAAAHHHH 271 (273)
T ss_dssp ---------
T ss_pred hhhhhhhcc
Confidence 665554443
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=2.5e-25 Score=139.34 Aligned_cols=113 Identities=19% Similarity=0.261 Sum_probs=104.9
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 77 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 77 KNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp HTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999997 899999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDG 128 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 128 (148)
+.+++ ++..+..|.||+++|+..++.+++++|++.
T Consensus 155 ~~ga~------------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 155 ELGAD------------ISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HTTCC------------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HCCCC------------CCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 96555 477789999999999999999999998863
No 63
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=1.8e-26 Score=150.56 Aligned_cols=132 Identities=21% Similarity=0.248 Sum_probs=112.2
Q ss_pred CCCcHHHHHHHHHhCCcc----------ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC-------------
Q 039865 2 LLGHLDFVQEILRRKPEL----------AGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARD------------- 58 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~----------~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~------------- 58 (148)
..|+.+++++|++.++++ .+..+..|.||||+|+..|+.+++++|+++|+++ +..+
T Consensus 58 ~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 136 (260)
T 3jxi_A 58 SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGY 136 (260)
T ss_dssp BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCS
T ss_pred hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCccccccc
Confidence 579999999999987542 1334558999999999999999999999999998 6777
Q ss_pred -CCCChHHHHHHHhCCHHHHHHHHh---cChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCC---------cceeEec
Q 039865 59 -IDGKNPLHIAAIRRHVNVLKELVK---GRPQAALILMERGVTILHACDDNGNTILHLAVLEKQ---------VEVFYMD 125 (148)
Q Consensus 59 -~~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~L 125 (148)
..|.||||+|+..|+.+++++|++ .+.+ ++..|..|+||||+|+..++ .+++++|
T Consensus 137 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~------------~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L 204 (260)
T 3jxi_A 137 FYFGELPLSLAACTNQPHIVHYLTENGHKQAD------------LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL 204 (260)
T ss_dssp CCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 689999999999999999999999 5555 47779999999999998777 6899999
Q ss_pred cCCCCCCc-------ccccCCCCCCCCCC
Q 039865 126 FDGNNMDS-------NIFYGCGLSGYGLS 147 (148)
Q Consensus 126 ~~~~~~~~-------~~~~~~~~~~~~~a 147 (148)
++.+. ++ +..+..+.||+++|
T Consensus 205 l~~ga-~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 205 LIKCA-KLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp HHHHH-HHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHhCc-ccccccchhhcccCCCCCHHHHH
Confidence 98544 45 56788889998876
No 64
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.91 E-value=6.7e-26 Score=154.29 Aligned_cols=135 Identities=21% Similarity=0.235 Sum_probs=98.7
Q ss_pred CCcHHHHHHHHHh----CCccccc-----------------cCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCccccCCC
Q 039865 3 LGHLDFVQEILRR----KPELAGA-----------------LDSRKASPLHLAAAKG--YLDIVLKLVSFNPEMCFARDI 59 (148)
Q Consensus 3 ~g~~~~v~~ll~~----~~~~~~~-----------------~~~~g~~~l~~a~~~g--~~~~~~~Ll~~~~~~~~~~~~ 59 (148)
.|+.+++++|++. +.++ +. .+..|.||||+|+..| +.+++++|++.|+++ +.++.
T Consensus 94 ~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~ 171 (364)
T 3ljn_A 94 ANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDK 171 (364)
T ss_dssp TTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCT
T ss_pred cCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCC
Confidence 5667777777776 5444 33 6667888888888888 888888888888887 77788
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCC
Q 039865 60 DGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGC 139 (148)
Q Consensus 60 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~ 139 (148)
.|.||||+|+..|+.+++++|++.+++. .+.. ++..+..|+||||+|+..|+.+++++|++.+. +++..+..
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-d~~~~d~~ 243 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTVPSK------SSLR-LDYANKQGNSHLHWAILINWEDVAMRFVEMGI-DVNMEDNE 243 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCSCS------SSCC-TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC-CTTCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccc------cccc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCC
Confidence 8888888888888888888888754330 1111 25567778888888888888888888887654 67777777
Q ss_pred CCCCCCCC
Q 039865 140 GLSGYGLS 147 (148)
Q Consensus 140 ~~~~~~~a 147 (148)
+.||+++|
T Consensus 244 g~tpL~~A 251 (364)
T 3ljn_A 244 HTVPLYLS 251 (364)
T ss_dssp SCCHHHHH
T ss_pred CCCHHHHH
Confidence 77777665
No 65
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=2.4e-25 Score=146.33 Aligned_cols=131 Identities=22% Similarity=0.275 Sum_probs=113.6
Q ss_pred CCCcHHHHHHHHHhCCcccccc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGAL-DSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~-~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
..|+++++++|+++++++ +.. +..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|
T Consensus 14 ~~g~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (285)
T 1wdy_A 14 QNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLF 91 (285)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 479999999999999998 555 888999999999999999999999999998 78899999999999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccc----------cCCCCCCCCCC
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIF----------YGCGLSGYGLS 147 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~----------~~~~~~~~~~a 147 (148)
++.+.+ ++..+..|.||||+|+..++.+++++|++.+. +++.. +..+.+|++.|
T Consensus 92 l~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~~~~~~~~~g~t~L~~A 155 (285)
T 1wdy_A 92 LSKGAD------------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGA-NVNLRRKTKEDQERLRKGGATALMDA 155 (285)
T ss_dssp HHTTCC------------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC-CTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred HHcCCC------------CCccCcccCCHHHHHHHhCCHHHHHHHHHhCC-CcccccccHHHHHhhccCCCcHHHHH
Confidence 996554 36678899999999999999999999998644 45444 45566766544
No 66
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=3.1e-26 Score=151.58 Aligned_cols=77 Identities=23% Similarity=0.157 Sum_probs=40.1
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|+++++++ +.. +|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|++
T Consensus 41 ~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 116 (285)
T 3kea_A 41 DNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVK 116 (285)
T ss_dssp TTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 34555555555555544 333 2455555555555555555555555554 4455555555555555555555555555
Q ss_pred c
Q 039865 83 G 83 (148)
Q Consensus 83 ~ 83 (148)
.
T Consensus 117 ~ 117 (285)
T 3kea_A 117 K 117 (285)
T ss_dssp H
T ss_pred c
Confidence 4
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.2e-26 Score=136.87 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=103.4
Q ss_pred CccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCC
Q 039865 17 PELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGV 96 (148)
Q Consensus 17 ~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~ 96 (148)
+++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+. ++.+++++|++.+.+
T Consensus 3 ~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---------- 69 (136)
T 1d9s_A 3 PGI-HMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE---------- 69 (136)
T ss_dssp CCC-SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC----------
T ss_pred CCc-cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC----------
Confidence 444 888999999999999999999999999999998 8899999999999999 999999999996554
Q ss_pred chhhhcccC-CCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 97 TILHACDDN-GNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 97 ~~~~~~~~~-g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
++..+.. |.||||+|+..++.+++++|++.+. +++..+..+.||+++|
T Consensus 70 --~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~tpl~~A 118 (136)
T 1d9s_A 70 --PNCADPATLTRPVHDAAREGFLDTLVVLHRAGA-RLDVCDAWGRLPVDLA 118 (136)
T ss_dssp --SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCC-CCCCCSSSSSCHHHHH
T ss_pred --CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHH
Confidence 4667888 9999999999999999999998655 7888888899998765
No 68
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=9.6e-26 Score=150.24 Aligned_cols=126 Identities=22% Similarity=0.217 Sum_probs=110.1
Q ss_pred CCCcHHHHHHHHHhCCccccc------cCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhC
Q 039865 2 LLGHLDFVQEILRRKPELAGA------LDSRKASPLHLAAAK---GYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRR 72 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~------~~~~g~~~l~~a~~~---g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 72 (148)
..|+++.++.|++.++++ +. .+..|.||||+|+.. ++.+++++|+++|+++ +.+|..|.||||+|+..|
T Consensus 160 ~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh~A~~~g 237 (301)
T 2b0o_E 160 CNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYN 237 (301)
T ss_dssp HTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHHHHHHTT
T ss_pred hccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 468999999999999997 65 688999999999997 8999999999999998 889999999999999999
Q ss_pred CHHHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 73 HVNVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 73 ~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
+.+++++|++.+++ ++..|..|.||||+|+..++.+++++|++.+. + .+.||+++|.
T Consensus 238 ~~~~v~~Ll~~gad------------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga-~------~g~tpLh~A~ 294 (301)
T 2b0o_E 238 QPDCLKLLLKGRAL------------VGTVNEAGETALDIARKKHHKECEELLEQAQA-G------TFAFPLHVDY 294 (301)
T ss_dssp CHHHHHHHHHTTCC------------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH-H------TTSSCCC---
T ss_pred CHHHHHHHHHcCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC-C------CCCChhHHHH
Confidence 99999999996655 47789999999999999999999999998544 2 4678888773
No 69
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=1.6e-26 Score=158.09 Aligned_cols=132 Identities=18% Similarity=0.185 Sum_probs=76.0
Q ss_pred HhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcCh--hHHHHH
Q 039865 14 RRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRP--QAALIL 91 (148)
Q Consensus 14 ~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~--~~~~~~ 91 (148)
+.|.++ +..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.+. ..+...
T Consensus 154 ~~ga~v-n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 231 (373)
T 2fo1_E 154 AAGADV-NAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEEL 231 (373)
T ss_dssp HTCCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCC
T ss_pred hcCCCC-cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhc
Confidence 566665 666667777777777777777777777777666 5666667777777777777777777665331 111111
Q ss_pred hhcCCchhhhc---------------------------------ccCCCceeeeeeeeCCcceeEeccCCCCCCcccccC
Q 039865 92 MERGVTILHAC---------------------------------DDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYG 138 (148)
Q Consensus 92 ~~~g~~~~~~~---------------------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~ 138 (148)
+..|.+|++.+ +..|.||||+|+..|+.+++++|++.+..+++..+.
T Consensus 232 d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~ 311 (373)
T 2fo1_E 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDE 311 (373)
T ss_dssp CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCT
T ss_pred CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCC
Confidence 22233332221 224556666666666666666666543335555555
Q ss_pred CCCCCCCCC
Q 039865 139 CGLSGYGLS 147 (148)
Q Consensus 139 ~~~~~~~~a 147 (148)
.+.||+++|
T Consensus 312 ~g~TpL~~A 320 (373)
T 2fo1_E 312 DGKTPIMLA 320 (373)
T ss_dssp TCCCHHHHH
T ss_pred CCCCHHHHH
Confidence 555555543
No 70
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=3.5e-25 Score=135.77 Aligned_cols=113 Identities=27% Similarity=0.306 Sum_probs=104.7
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 45 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 122 (167)
T 3v31_A 45 AHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLL 122 (167)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999998 889999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDG 128 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 128 (148)
+.+.+ .+..+..|.||+++|+..++.+++++|++.
T Consensus 123 ~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 123 ESGAD------------PTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HcCCC------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 96554 367789999999999999999999999864
No 71
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=3e-25 Score=141.84 Aligned_cols=115 Identities=19% Similarity=0.222 Sum_probs=100.8
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSF-NPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++. |+++ +.++..|.||||+|+..|+.+++++|
T Consensus 82 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~L 159 (222)
T 3ehr_A 82 KRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAWKGYADIVQLL 159 (222)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 468999999999999997 89999999999999999999999999998 8888 89999999999999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
++.+++ ++..+..|.|||++|+..+..++++.|++.+.
T Consensus 160 l~~ga~------------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 160 LAKGAR------------TDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHHTCC------------SCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred HHcCCC------------CccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 996555 47779999999999999999999999987544
No 72
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.91 E-value=1.7e-25 Score=151.03 Aligned_cols=132 Identities=29% Similarity=0.297 Sum_probs=116.3
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+.+++|+......++..+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|+
T Consensus 33 ~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll 111 (351)
T 3utm_A 33 RSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLL 111 (351)
T ss_dssp HHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHH
Confidence 4689999999998754445889999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+.+.+ ++..+..|.||||+|+..++.+++++|++.+. +++..+..+.+++++|
T Consensus 112 ~~g~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~~~l~~a 164 (351)
T 3utm_A 112 KHGAC------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGA-DPTLVNCHGKSAVDMA 164 (351)
T ss_dssp HTTCC------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHC
T ss_pred HCCCC------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCccccCCCCcchHHH
Confidence 96554 46678899999999999999999999998755 7777777777776654
No 73
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.91 E-value=1.3e-25 Score=141.25 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=95.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSF-NPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++. +.++ +..+..|.||||+|+..++.+++++|
T Consensus 48 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 125 (201)
T 3hra_A 48 HNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDL-NKHNRYGGNALIPAAEKGHIDNVKLL 125 (201)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT-TCCCTTSCCSHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccc-ccccCCCCcHHHHHHHcCCHHHHHHH
Confidence 357788888888888887 77788888888888888888888888844 4454 67788888888888888888888888
Q ss_pred HhcChhHHHHHhhcCCchh---------------------------hhcccCCCceeeeeeeeCCcceeEeccCCC
Q 039865 81 VKGRPQAALILMERGVTIL---------------------------HACDDNGNTILHLAVLEKQVEVFYMDFDGN 129 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~---------------------------~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~ 129 (148)
++.+...+...+..|.+|+ +..+..|.||||+|+..++.+++++|++.|
T Consensus 126 l~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 126 LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 8765333333333344443 444888999999999999999999998753
No 74
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=1.7e-25 Score=157.96 Aligned_cols=120 Identities=24% Similarity=0.281 Sum_probs=105.8
Q ss_pred CCCcHHHHHHHHHhCCcccccc------CCCCCcHHHHHHH---cCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhC
Q 039865 2 LLGHLDFVQEILRRKPELAGAL------DSRKASPLHLAAA---KGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRR 72 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~------~~~g~~~l~~a~~---~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 72 (148)
..|+.+.++.|+++|+++ +.. +..|.||||+|+. .|+.+++++|+++|+++ +.+|..|.||||+|+..|
T Consensus 141 ~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g 218 (497)
T 3lvq_E 141 CNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYN 218 (497)
T ss_dssp HHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTT
T ss_pred hccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcC
Confidence 468999999999999997 666 8889999999977 89999999999999998 899999999999999999
Q ss_pred CHHHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccc
Q 039865 73 HVNVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIF 136 (148)
Q Consensus 73 ~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~ 136 (148)
+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|++.++ +++..
T Consensus 219 ~~~~v~~Ll~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga-~~~~~ 269 (497)
T 3lvq_E 219 QPDCLKLLLKGRAL------------VGTVNEAGETALDIARKKHHKECEELLEQAQA-GTFAF 269 (497)
T ss_dssp CHHHHHHHHHTCCC------------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred CHHHHHHHHHcCCC------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC-CCCCC
Confidence 99999999997665 47889999999999999999999999998655 55543
No 75
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.91 E-value=4.8e-25 Score=150.09 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=106.1
Q ss_pred CCC--cHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-----ccccCCCCCChHHHHHHHhCCH
Q 039865 2 LLG--HLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPE-----MCFARDIDGKNPLHIAAIRRHV 74 (148)
Q Consensus 2 ~~g--~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~-----~~~~~~~~g~t~l~~a~~~~~~ 74 (148)
..| +.+++++|++.++++ +..+..|.||||+|+..|+.+++++|++.|++ + +..+..|.||||+|+..|+.
T Consensus 147 ~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 147 GLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANKQGNSHLHWAILINWE 224 (364)
T ss_dssp HSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCTTCCCTTHHHHTTTCH
T ss_pred HcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCCCCCcHHHHHHHcCCH
Confidence 357 899999999999998 99999999999999999999999999999988 6 78999999999999999999
Q ss_pred HHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 75 NVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 75 ~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++.++
T Consensus 225 ~~v~~Ll~~gad------------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 225 DVAMRFVEMGID------------VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp HHHHHHHTTTCC------------TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCC------------CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence 999999996655 47779999999999999999999999998543
No 76
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=3.9e-26 Score=142.53 Aligned_cols=130 Identities=12% Similarity=0.105 Sum_probs=109.4
Q ss_pred CCCcHHHHHHHHHhCCccccccC-CCCCcHHHHHHHcCCH----HHHHHHHhcCCCccccCCCCCChHHHHHHHhCC---
Q 039865 2 LLGHLDFVQEILRRKPELAGALD-SRKASPLHLAAAKGYL----DIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRH--- 73 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~-~~g~~~l~~a~~~g~~----~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~--- 73 (148)
..|+++.++.++..+.+ ..+ ..|+||||+|+..++. +++++|+++|+++ +.++..|.||||+|+..++
T Consensus 15 ~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~ 90 (186)
T 3t8k_A 15 MLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDI 90 (186)
T ss_dssp HHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcch
Confidence 46899999999988744 333 6799999999999975 5899999999999 8999999999999999886
Q ss_pred ---HHHHHHHHhcChhHHHHHhhcCCchhhhcccCCC-ceeeeeeeeCC-----cceeEeccCCCCCCcccccCCCCCCC
Q 039865 74 ---VNVLKELVKGRPQAALILMERGVTILHACDDNGN-TILHLAVLEKQ-----VEVFYMDFDGNNMDSNIFYGCGLSGY 144 (148)
Q Consensus 74 ---~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~-t~l~~a~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~ 144 (148)
.+++++|++.+++ ++..|..|+ ||||+|+..+. .+++++|++..+.+++..+..|.||+
T Consensus 91 ~~~~~iv~~Ll~~Gad------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 91 TGTTELCKIFLEKGAD------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158 (186)
T ss_dssp HHHHHHHHHHHHTTCC------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred hhHHHHHHHHHHCCCC------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHH
Confidence 5789999987666 578899999 99999998544 45889999833448999999999999
Q ss_pred CCC
Q 039865 145 GLS 147 (148)
Q Consensus 145 ~~a 147 (148)
++|
T Consensus 159 ~~A 161 (186)
T 3t8k_A 159 EFV 161 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 77
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=4.1e-25 Score=142.13 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=102.0
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|++.+++.....+..|.||||+|+..++.+++++|+
T Consensus 18 ~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll 96 (240)
T 3eu9_A 18 QYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM 96 (240)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH
T ss_pred HcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH
Confidence 579999999999999997 8899999999999999999999999999999885566677999999999999999999999
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYG 145 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 145 (148)
+.+.+ .+..+..|.||||+|+..++.+++++|++.+. +++..+..+.+|++
T Consensus 97 ~~g~~------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 97 KYGAD------------PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ-DVDMMDQNGMTPLM 147 (240)
T ss_dssp HTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHH
T ss_pred HcCCC------------CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCC-CccccCCCCCcHHH
Confidence 96544 24445556666666666666666666665433 44444445555544
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=3.6e-26 Score=156.30 Aligned_cols=143 Identities=21% Similarity=0.242 Sum_probs=115.1
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcC---CCccccCCCCCChHHHHHHHhC---CHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFN---PEMCFARDIDGKNPLHIAAIRR---HVN 75 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~---~~~~~~~~~~g~t~l~~a~~~~---~~~ 75 (148)
..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.+ .++ +..+..|.||||+|+..+ +.+
T Consensus 175 ~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~~~~~~~~~~ 252 (373)
T 2fo1_E 175 LARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQVA 252 (373)
T ss_dssp HHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHHHSCSTTHHH
T ss_pred HcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHHHhCCcchHH
Confidence 357889999999999887 888888999999999999999999999877 566 677888888888888887 788
Q ss_pred HHHHHHhcChhHHH-------HHhhcCCchhhhc-----------------------ccCCCceeeeeeeeCCcceeEec
Q 039865 76 VLKELVKGRPQAAL-------ILMERGVTILHAC-----------------------DDNGNTILHLAVLEKQVEVFYMD 125 (148)
Q Consensus 76 ~~~~ll~~~~~~~~-------~~~~~g~~~~~~~-----------------------~~~g~t~l~~a~~~~~~~~~~~L 125 (148)
++++|++.+.+... ..+..|.+|++.+ +..|+||||+|+..|+.+++++|
T Consensus 253 ~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~L 332 (373)
T 2fo1_E 253 SAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 332 (373)
T ss_dssp HHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 88888886543211 1122455555543 78899999999999999999999
Q ss_pred cCCCCCCcccccCCCCCCCCCC
Q 039865 126 FDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~a 147 (148)
++.+. +++..+..+.||+++|
T Consensus 333 l~~ga-d~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 333 IQQGA-SVEAVDATDHTARQLA 353 (373)
T ss_dssp HHTTC-CSSCCCSSSCCHHHHH
T ss_pred HHcCC-CccCCCCCCCCHHHHH
Confidence 99755 8888888999998876
No 79
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=1.7e-25 Score=130.88 Aligned_cols=111 Identities=23% Similarity=0.218 Sum_probs=98.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcc
Q 039865 24 DSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACD 103 (148)
Q Consensus 24 ~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~ 103 (148)
+..|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..++.+++++|++.+.+ ++..+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------~~~~d 70 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------------INAPD 70 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------------TTCCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------CCcCC
Confidence 456789999999999999999999999998 88999999999999999999999999996554 46778
Q ss_pred cCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 104 DNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 104 ~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
..|+||||+|+..++.+++++|++.+. +++..+..+.||+++|.
T Consensus 71 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 71 KHHITPLLSAVYEGHVSCVKLLLSKGA-DKTVKGPDGLTAFEATD 114 (123)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHhC
Confidence 999999999999999999999998755 78888889999998773
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=7.5e-26 Score=148.67 Aligned_cols=131 Identities=23% Similarity=0.254 Sum_probs=111.2
Q ss_pred CCcHHHHHHHHHhCCcc------ccc----cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCC-------------
Q 039865 3 LGHLDFVQEILRRKPEL------AGA----LDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDI------------- 59 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~------~~~----~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~------------- 59 (148)
.|+.+++++|++.++++ ++. .+..|.||||+|+..|+.+++++|+++|+++ +.++.
T Consensus 67 ~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~ 145 (273)
T 2pnn_A 67 NGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGF 145 (273)
T ss_dssp TTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCC
T ss_pred cCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Cccccccccccccccccc
Confidence 48999999999998653 122 5668999999999999999999999999998 67776
Q ss_pred -CCChHHHHHHHhCCHHHHHHHHh---cChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCC---------cceeEecc
Q 039865 60 -DGKNPLHIAAIRRHVNVLKELVK---GRPQAALILMERGVTILHACDDNGNTILHLAVLEKQ---------VEVFYMDF 126 (148)
Q Consensus 60 -~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~L~ 126 (148)
.|.||||+|+..++.+++++|++ .+.+ ++..+..|+||||+|+..++ .+++++|+
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------------~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll 213 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSWQPAD------------ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL 213 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------------ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHH
Confidence 79999999999999999999999 5555 47779999999999999888 78999999
Q ss_pred CCCCCCcc-------cccCCCCCCCCCC
Q 039865 127 DGNNMDSN-------IFYGCGLSGYGLS 147 (148)
Q Consensus 127 ~~~~~~~~-------~~~~~~~~~~~~a 147 (148)
+.+. +++ ..+..+.||+++|
T Consensus 214 ~~ga-~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 214 ILGA-KLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHH-HHCTTCCGGGCCCTTSCCHHHHH
T ss_pred Hhhh-hcccccccccccCCCCCCHHHHH
Confidence 8544 443 4677888888776
No 81
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=3.3e-25 Score=144.57 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=104.8
Q ss_pred CCCcHHHHHHHHHhCCccccccC--------------CCCCcHHHHHHHcCCHHHHHHHHh---cCCCccccCCCCCChH
Q 039865 2 LLGHLDFVQEILRRKPELAGALD--------------SRKASPLHLAAAKGYLDIVLKLVS---FNPEMCFARDIDGKNP 64 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~--------------~~g~~~l~~a~~~g~~~~~~~Ll~---~~~~~~~~~~~~g~t~ 64 (148)
..|+.+++++|+++|+++ +..+ ..|.||||+|+..|+.+++++|++ .|+++ +.+|..|.||
T Consensus 102 ~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~-~~~d~~g~Tp 179 (260)
T 3jxi_A 102 ERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL-RRQDSRGNTV 179 (260)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCH
T ss_pred HcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC-cccCCCCCcH
Confidence 468999999999999998 7777 689999999999999999999999 89998 8999999999
Q ss_pred HHHHHHhCC---------HHHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 65 LHIAAIRRH---------VNVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 65 l~~a~~~~~---------~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
||+|+..++ .+++++|++.+++.. ......+..+..|+||||+|+..|+.+++++|++++.
T Consensus 180 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~-----~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 180 LHALVAIADNTRENTKFVTKMYDLLLIKCAKLF-----PDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC-----TTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHhCcccc-----cccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 999998887 689999998655520 0111125679999999999999999999999998654
No 82
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=1.4e-25 Score=148.38 Aligned_cols=130 Identities=16% Similarity=0.165 Sum_probs=105.7
Q ss_pred CCCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCC-ChHHHHHHHhCCHHHHHH
Q 039865 1 SLLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDG-KNPLHIAAIRRHVNVLKE 79 (148)
Q Consensus 1 a~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~ 79 (148)
+..|+.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|+++|+++ +.++..| .||||+|+..++.+++++
T Consensus 70 ~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~ 147 (285)
T 3kea_A 70 ATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSY 147 (285)
T ss_dssp TTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4578888999999988887 888888999999999999999999999988888 7888888 799999999999999999
Q ss_pred HHhcChhHHHHHhhcCCchhhhccc-CCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCC-CCCC
Q 039865 80 LVKGRPQAALILMERGVTILHACDD-NGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSG-YGLS 147 (148)
Q Consensus 80 ll~~~~~~~~~~~~~g~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~-~~~a 147 (148)
|++.++.. .+. .|.||||+|+..|+.+++++|++.+. +++..+..+.+| +++|
T Consensus 148 Ll~~g~~~--------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-d~n~~~~~g~t~~L~~A 202 (285)
T 3kea_A 148 FLSEIPST--------------FDLAILLSCIHITIKNGHVDMMILLLDYMT-STNTNNSLLFIPDIKLA 202 (285)
T ss_dssp HHTTSCTT--------------CCCSTHHHHHHHHHHTTCHHHHHHHHHHHH-HTCTTCCCBCCTTHHHH
T ss_pred HHhCCCcc--------------ccccCCccHHHHHHHcChHHHHHHHHHcCC-CCCcccCCCCChHHHHH
Confidence 98854331 122 78899999999999999998888644 777777777776 6654
No 83
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=5.8e-25 Score=122.67 Aligned_cols=92 Identities=36% Similarity=0.559 Sum_probs=74.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcccC
Q 039865 26 RKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACDDN 105 (148)
Q Consensus 26 ~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~ 105 (148)
+|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++.+++ ++..+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------~~~~d~~ 67 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------VNAKDKN 67 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------TTCCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCccCCC
Confidence 3778888888888888888888888887 78888888888888888888888888886544 3666788
Q ss_pred CCceeeeeeeeCCcceeEeccCCCC
Q 039865 106 GNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 106 g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
|+||||+|+..++.+++++|++.+.
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 68 GRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 8888888888888888888887543
No 84
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=9.1e-25 Score=143.93 Aligned_cols=115 Identities=22% Similarity=0.262 Sum_probs=105.0
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.++++.|++.+..+ +..+..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 159 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll 236 (276)
T 4hbd_A 159 TQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGLLL 236 (276)
T ss_dssp SHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 357889999999999776 888899999999999999999999999999998 899999999999999999999999999
Q ss_pred h-cChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 82 K-GRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 82 ~-~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
+ .+.+ ++..|..|+||||+|+..|+.+++++|+++.+
T Consensus 237 ~~~gad------------~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 237 AVPSCD------------ISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp TSTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred hcCCCC------------CcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 8 4444 47779999999999999999999999998554
No 85
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.90 E-value=4.6e-25 Score=143.65 Aligned_cols=122 Identities=20% Similarity=0.218 Sum_probs=104.4
Q ss_pred CCCcHHHHHHHHHhCCccccccCCC-------------CCcHHHHHHHcCCHHHHHHHHh---cCCCccccCCCCCChHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSR-------------KASPLHLAAAKGYLDIVLKLVS---FNPEMCFARDIDGKNPL 65 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~-------------g~~~l~~a~~~g~~~~~~~Ll~---~~~~~~~~~~~~g~t~l 65 (148)
..|+.+++++|+++|+++ +..+.. |.||||+|+..|+.+++++|++ .|+++ +.+|..|.|||
T Consensus 99 ~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpL 176 (256)
T 2etb_A 99 EKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVL 176 (256)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHH
T ss_pred HcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHH
Confidence 468999999999999998 777775 9999999999999999999999 89998 89999999999
Q ss_pred HHHHH--hCCHH-------HHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 66 HIAAI--RRHVN-------VLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 66 ~~a~~--~~~~~-------~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
|+|+. .++.+ ++++|++.+++.. ......+..|..|+||||+|+..|+.+++++|++++.
T Consensus 177 h~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~-----~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 177 HALVMIADNSPENSALVIHMYDGLLQMGARLC-----PTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHS-----TTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcccCCchhhHHHHHHHHHHHHcCCCcc-----cccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 99998 77888 9999999665510 0000116678999999999999999999999998544
No 86
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=2.7e-24 Score=146.51 Aligned_cols=113 Identities=21% Similarity=0.215 Sum_probs=104.6
Q ss_pred CC-CcHHHHHHHHHhCCccccccC--CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHH
Q 039865 2 LL-GHLDFVQEILRRKPELAGALD--SRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLK 78 (148)
Q Consensus 2 ~~-g~~~~v~~ll~~~~~~~~~~~--~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 78 (148)
.. |++++++.|+++++++ +..+ ..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..++.++++
T Consensus 208 ~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~ 285 (368)
T 3jue_A 208 GHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATILGHTGLAC 285 (368)
T ss_dssp SSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCcHHHHH
Confidence 45 8999999999999998 8777 88999999999999999999999999998 899999999999999999999999
Q ss_pred HHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCC
Q 039865 79 ELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDG 128 (148)
Q Consensus 79 ~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~ 128 (148)
+|++.+++ ++..|..|.||||+|+..++.+++++|+..
T Consensus 286 ~LL~~Gad------------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 286 LFLKRGAD------------LGARDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp HHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHCcCC------------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99997655 477899999999999999999999999863
No 87
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=3.4e-24 Score=141.37 Aligned_cols=116 Identities=19% Similarity=0.190 Sum_probs=104.4
Q ss_pred CCCcHHHHHHHHHhCCccc-----cccCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCC
Q 039865 2 LLGHLDFVQEILRRKPELA-----GALDSRKASPLHLAAAK---GYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRH 73 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~-----~~~~~~g~~~l~~a~~~---g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 73 (148)
..|+++.++.++..+.++. +..+..|.||||+|+.. |+.+++++|+++|+++ +.+|..|.||||+|+..|+
T Consensus 139 ~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 139 KTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp HTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTC
T ss_pred hhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCC
Confidence 3688999999999998852 44478899999999999 8999999999999998 8999999999999999999
Q ss_pred HHHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC
Q 039865 74 VNVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN 130 (148)
Q Consensus 74 ~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~ 130 (148)
.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|++.++
T Consensus 218 ~~~v~~Ll~~gad------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 218 AECLKLLLRGKAS------------IEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCC------------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999996655 47889999999999999999999999998544
No 88
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=5.2e-24 Score=136.91 Aligned_cols=125 Identities=17% Similarity=0.128 Sum_probs=100.9
Q ss_pred HHHHHHhCCccc--cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChh
Q 039865 9 VQEILRRKPELA--GALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQ 86 (148)
Q Consensus 9 v~~ll~~~~~~~--~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 86 (148)
++.|+++++++. +..+..+.|+||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|++.+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 467888887762 233455778899999999999999999999998 88999999999999999999999999996555
Q ss_pred HHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCccccc-CCCCCCCCCC
Q 039865 87 AALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFY-GCGLSGYGLS 147 (148)
Q Consensus 87 ~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~-~~~~~~~~~a 147 (148)
++..+..|+||||+|+..|+.+++++|++.+. +++..+ ..+.||+++|
T Consensus 80 ------------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 80 ------------VNSPDSHGWTPLHCAASCNDTVICMALVQHGA-AIFATTLSDGATAFEKC 128 (229)
T ss_dssp ------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-CTTCCCSSTTCCTGGGC
T ss_pred ------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CcccccCCCCCCHHHHH
Confidence 47778999999999999999999999998755 777765 5888999887
No 89
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=1.5e-24 Score=125.42 Aligned_cols=109 Identities=29% Similarity=0.286 Sum_probs=96.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhh
Q 039865 22 ALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHA 101 (148)
Q Consensus 22 ~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~ 101 (148)
.+|..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++.+++ ++.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------~~~ 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD------------VNA 70 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC------------TTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------Ccc
Confidence 56889999999999999999999999999998 88999999999999999999999999996554 467
Q ss_pred cccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCC
Q 039865 102 CDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGY 144 (148)
Q Consensus 102 ~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 144 (148)
.+..|.||||+|+..++.+++++|++.+. +++..+..+.+|.
T Consensus 71 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga-~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 71 RSKDGNTPEHLAKKNGHHEIVKLLDAKGA-DVNARSWGSSHHH 112 (115)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTSS-SHHHHSCCCC---
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCcCCccccccc
Confidence 78899999999999999999999998755 7888877777664
No 90
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.89 E-value=8.9e-25 Score=144.54 Aligned_cols=144 Identities=19% Similarity=0.071 Sum_probs=96.6
Q ss_pred CCCCcHHHHHHHHHhCC----------ccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHH
Q 039865 1 SLLGHLDFVQEILRRKP----------ELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAI 70 (148)
Q Consensus 1 a~~g~~~~v~~ll~~~~----------~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 70 (148)
|..|+.+.+..++..++ ...+..+..|+||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+.
T Consensus 23 a~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 101 (285)
T 3d9h_A 23 SMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACL 101 (285)
T ss_dssp -------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHH
T ss_pred hhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence 35677666666655532 223667889999999999999999999999999998 8899999999999999
Q ss_pred hCCHHHHHHHHhcChhHHHHHhhcCCchhhhc---------------------ccCCCceeeeeeeeCCcceeEeccCCC
Q 039865 71 RRHVNVLKELVKGRPQAALILMERGVTILHAC---------------------DDNGNTILHLAVLEKQVEVFYMDFDGN 129 (148)
Q Consensus 71 ~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~---------------------~~~g~t~l~~a~~~~~~~~~~~L~~~~ 129 (148)
.|+.+++++|++.+.+ +...+..|.+|++.+ +..|.||||+|+..|+.+++++|++.+
T Consensus 102 ~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 180 (285)
T 3d9h_A 102 GGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG 180 (285)
T ss_dssp TTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 9999999999996543 333345566666544 334667777777777777777777644
Q ss_pred CCCcccccCCCCCCCCCC
Q 039865 130 NMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 130 ~~~~~~~~~~~~~~~~~a 147 (148)
. +++..+..+.||+++|
T Consensus 181 ~-~~~~~d~~g~t~L~~A 197 (285)
T 3d9h_A 181 G-NIDHKISHLGTPLYLA 197 (285)
T ss_dssp C-CTTCCBTTTBCHHHHH
T ss_pred C-CCCCcCCCCCCHHHHH
Confidence 3 5566666666666544
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=3.8e-24 Score=133.14 Aligned_cols=107 Identities=22% Similarity=0.198 Sum_probs=89.6
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC-CCCChHHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARD-IDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~l 80 (148)
..|+.++++.|++ +.++ +.++..|.||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..++.+++++|
T Consensus 53 ~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~~~~~~~v~~L 129 (183)
T 3deo_A 53 RKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEAL 129 (183)
T ss_dssp HTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHhcCcHHHHHHH
Confidence 4689999999999 8887 899999999999999999999999999999998 6676 8899999999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeE
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFY 123 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 123 (148)
++.+++ ++..+..|+||||+|+..++.+..+
T Consensus 130 l~~ga~------------~~~~d~~g~tpl~~A~~~~~~~~~~ 160 (183)
T 3deo_A 130 VELGAD------------IEVEDERGLTALELAREILKTTPKG 160 (183)
T ss_dssp HHHTCC------------TTCCCTTSCCHHHHHHHHHHTCCCC
T ss_pred HHcCCC------------CcCCCCCCCCHHHHHHHhccCcccc
Confidence 996554 2455666666666666655444443
No 92
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.89 E-value=6.9e-24 Score=138.61 Aligned_cols=127 Identities=17% Similarity=0.156 Sum_probs=69.8
Q ss_pred CcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhc
Q 039865 4 GHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKG 83 (148)
Q Consensus 4 g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 83 (148)
|+.+++++|++.++++ +..+..|.||||+|+..|+.+++++|++.|+++ + .+..|.||||+|+..++.+++++|++.
T Consensus 112 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 112 GHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVARTASEELACLLMDF 188 (261)
T ss_dssp TCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred CcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcCCHHHHHHHHHc
Confidence 4444444444444443 444444444444444444444444444444444 2 144444444444444444444444443
Q ss_pred ChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCC-------CCcccccCCCCCCCCCC
Q 039865 84 RPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNN-------MDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~-------~~~~~~~~~~~~~~~~a 147 (148)
+++ .+..|..|+||+|+|+.. .+++++|++.+. .+....+..|.++++.|
T Consensus 189 gad------------~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~ 245 (261)
T 2xai_A 189 GAD------------TQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKI 245 (261)
T ss_dssp TCC------------TTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGG
T ss_pred CCC------------CCCcCCCCCChhhhcccc--ccHHHHHHhccCCccHHHHHHHHHHHHhchhccccC
Confidence 222 255589999999999954 457888887544 24456677788887765
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1.4e-24 Score=140.75 Aligned_cols=123 Identities=20% Similarity=0.171 Sum_probs=107.1
Q ss_pred CCCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC-CCCChHHHHHHHhCCHHHHHH
Q 039865 1 SLLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARD-IDGKNPLHIAAIRRHVNVLKE 79 (148)
Q Consensus 1 a~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ 79 (148)
|..|+.++++.|++ +.++ +.++..|.||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..|+.+++++
T Consensus 53 ~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~~g~~~~v~~ 129 (244)
T 3ui2_A 53 ARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAGYVRPEVVEA 129 (244)
T ss_dssp HTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHHTTCHHHHHH
T ss_pred HHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 36799999999999 8887 999999999999999999999999999999998 6666 889999999999999999999
Q ss_pred HHhcChhHHHHHhhcCCchhhhc-----ccCCCceeeeeeeeCCcceeEeccC
Q 039865 80 LVKGRPQAALILMERGVTILHAC-----DDNGNTILHLAVLEKQVEVFYMDFD 127 (148)
Q Consensus 80 ll~~~~~~~~~~~~~g~~~~~~~-----~~~g~t~l~~a~~~~~~~~~~~L~~ 127 (148)
|++.+++ ++..+..|.+|++.+ ...+.|||++|+..|+.+++++|++
T Consensus 130 Ll~~ga~-~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 130 LVELGAD-IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HHHTTCC-TTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCC-CCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHH
Confidence 9997554 445567788888777 4567888888888898888888775
No 94
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=1.7e-24 Score=128.71 Aligned_cols=110 Identities=27% Similarity=0.308 Sum_probs=98.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcc
Q 039865 24 DSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACD 103 (148)
Q Consensus 24 ~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~ 103 (148)
...+.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++.+.+ ++..+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------~~~~d 77 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------------VNAVD 77 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------TTCCC
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCcCC
Confidence 455789999999999999999999999998 88999999999999999999999999996554 46778
Q ss_pred cCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 104 DNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 104 ~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
..|.||||+|+..++.+++++|++.+. +++..+..+.||+++|
T Consensus 78 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpl~~A 120 (136)
T 2jab_A 78 AIGFTPLHLAAFIGHLEIAEVLLKHGA-DVNAQDKFGKTAFDIS 120 (136)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCC-CCcCcCCCCCCHHHHH
Confidence 899999999999999999999998654 7888888888888765
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=3.1e-24 Score=133.93 Aligned_cols=108 Identities=11% Similarity=-0.004 Sum_probs=96.7
Q ss_pred HHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC------HHHHHHHHhcCCCccccCCCCCC-hHHHHHHHhC-----C
Q 039865 6 LDFVQEILRRKPELAGALDSRKASPLHLAAAKGY------LDIVLKLVSFNPEMCFARDIDGK-NPLHIAAIRR-----H 73 (148)
Q Consensus 6 ~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~------~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a~~~~-----~ 73 (148)
.+++++|+++|+++ +.++..|+||||+|+..++ .+++++|+++|+++ +.+|..|. ||||+|+..+ .
T Consensus 55 ~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~ 132 (186)
T 3t8k_A 55 YKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEM 132 (186)
T ss_dssp HHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHH
T ss_pred HHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhH
Confidence 46899999999998 9999999999999999987 57899999999999 89999999 9999999844 3
Q ss_pred HHHHHHHHh-cChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccC
Q 039865 74 VNVLKELVK-GRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFD 127 (148)
Q Consensus 74 ~~~~~~ll~-~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~ 127 (148)
.+++++|++ .+++ ++..|..|+||||+|+..++.+++++|.+
T Consensus 133 ~~iv~~Ll~~~gad------------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 133 IPLYKLIFSQSGLQ------------LLIKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp HHHHHHHHTSTTCC------------TTCCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC------------CcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 568899998 6655 58889999999999999999999998875
No 96
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=9.1e-24 Score=123.55 Aligned_cols=108 Identities=34% Similarity=0.494 Sum_probs=96.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcccC
Q 039865 26 RKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACDDN 105 (148)
Q Consensus 26 ~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~ 105 (148)
+|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..++.+++++|++.+.+ ++..+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------~~~~~~~ 67 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------VNAKDKN 67 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------TTCCCTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC------------CcccCCC
Confidence 4899999999999999999999999998 78899999999999999999999999996544 3667889
Q ss_pred CCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 106 GNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 106 g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
|.||||+|+..++.+++++|++.+. +++..+..+.+|+++|
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~A 108 (126)
T 1n0r_A 68 GRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLA 108 (126)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred CCcHHHHHHHcChHHHHHHHHHcCC-CCcccCCCCCCHHHHH
Confidence 9999999999999999999998654 7888888888888765
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=2.2e-24 Score=137.82 Aligned_cols=112 Identities=17% Similarity=0.200 Sum_probs=100.6
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhc-ChhHHHHHhhcCCchhhh
Q 039865 23 LDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKG-RPQAALILMERGVTILHA 101 (148)
Q Consensus 23 ~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~g~~~~~~ 101 (148)
.+..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..|+.+++++|++. +.+ ++.
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------------~~~ 135 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------------LNQ 135 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------------CCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------------ccc
Confidence 4556789999999999999999999999998 78999999999999999999999999986 433 477
Q ss_pred cccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCCC
Q 039865 102 CDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLSS 148 (148)
Q Consensus 102 ~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~as 148 (148)
.+..|+||||+|+..|+.+++++|++.+. +++..+..+.||+++|.
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A~ 181 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLAKGA-RTDLRNIEKKLAFDMAT 181 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTC-CSCCCCTTSCCHHHHCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCccccCCCCCHHHHhc
Confidence 79999999999999999999999998654 78888889999998874
No 98
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=7e-22 Score=110.08 Aligned_cols=82 Identities=35% Similarity=0.573 Sum_probs=77.3
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +.++..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..++.+++++|+
T Consensus 11 ~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~~~~~~~Ll 88 (93)
T 1n0q_A 11 RNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLL 88 (93)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 468999999999999998 999999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcCh
Q 039865 82 KGRP 85 (148)
Q Consensus 82 ~~~~ 85 (148)
+.++
T Consensus 89 ~~ga 92 (93)
T 1n0q_A 89 EAGA 92 (93)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 8653
No 99
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.87 E-value=9.9e-23 Score=131.08 Aligned_cols=121 Identities=24% Similarity=0.211 Sum_probs=65.8
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|++.++..++..+..|.||||+|+..++.+++++|++.|+++ +.++..|.||||+|+..++.+++++|++
T Consensus 87 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 87 KGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp TTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 345555555555552222445555555555555555555555555555554 4445555555555555555555555555
Q ss_pred cChhHHHHHhhcCCchh----------------------hhcccCCCceeeeeeeeCCcceeEec
Q 039865 83 GRPQAALILMERGVTIL----------------------HACDDNGNTILHLAVLEKQVEVFYMD 125 (148)
Q Consensus 83 ~~~~~~~~~~~~g~~~~----------------------~~~~~~g~t~l~~a~~~~~~~~~~~L 125 (148)
.+.+ +...+..|.+|+ +..+..|.||||+|+..++.+.+..|
T Consensus 166 ~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l 229 (237)
T 3b7b_A 166 AKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229 (237)
T ss_dssp TTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHH
T ss_pred cCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3222 111222233333 45588999999999999987655444
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.1e-23 Score=131.10 Aligned_cols=109 Identities=23% Similarity=0.193 Sum_probs=97.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcc
Q 039865 24 DSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACD 103 (148)
Q Consensus 24 ~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~ 103 (148)
+..|.||||+|+..|+.++++.|++ +.++ +.++..|.||||+|+..++.+++++|++.+++ ++..+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------~~~~~ 106 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------LDHRD 106 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------TTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCcCC
Confidence 4568899999999999999999999 8888 88999999999999999999999999996554 35556
Q ss_pred -cCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 104 -DNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 104 -~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
..|+||||+|+..++.+++++|++.+. +++..+..+.||+++|
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~tpl~~A 150 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGA-DIEVEDERGLTALELA 150 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHH
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCC-CCcCCCCCCCCHHHHH
Confidence 889999999999999999999998654 7888888899988765
No 101
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=4.5e-24 Score=143.68 Aligned_cols=110 Identities=19% Similarity=0.174 Sum_probs=95.1
Q ss_pred HHHHHHHHHhCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCC---HHHHHHHH
Q 039865 6 LDFVQEILRRKPELAGA-LDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRH---VNVLKELV 81 (148)
Q Consensus 6 ~~~v~~ll~~~~~~~~~-~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~ll 81 (148)
.++++.|++.+.++ +. ++..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..|+ .++++.|+
T Consensus 110 ~~~~~~l~~~g~dv-n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll 187 (327)
T 1sw6_A 110 QEVNDAFPNTQLNL-NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALL 187 (327)
T ss_dssp HHHHHHCTTSCCCS-CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHH
T ss_pred HHHHHHHHhcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHH
Confidence 46777888888887 77 8999999999999999999999999999999 8999999999999999988 56777777
Q ss_pred hcChhHHHHHhhcCCchhhhcccCCCceeeeeee----eCCcceeEeccCC
Q 039865 82 KGRPQAALILMERGVTILHACDDNGNTILHLAVL----EKQVEVFYMDFDG 128 (148)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~----~~~~~~~~~L~~~ 128 (148)
+..... ++..+..|+||||+|+. .++.+++++|++.
T Consensus 188 ~~~~~~-----------~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 188 DYLYPC-----------LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp HHHGGG-----------GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred Hhhhcc-----------ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 643221 46779999999999998 8999999998864
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=2.6e-23 Score=134.78 Aligned_cols=108 Identities=23% Similarity=0.204 Sum_probs=96.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcc-
Q 039865 25 SRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACD- 103 (148)
Q Consensus 25 ~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~- 103 (148)
..|.||||+|+..|+.+++++|++ ++++ +.++..|.||||+|+..|+.+++++|++.+++ ++..+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------~~~~~~ 108 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------LDHRDM 108 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------------TTCCCS
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------CCcCCC
Confidence 468899999999999999999999 8888 88999999999999999999999999996555 35556
Q ss_pred cCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 104 DNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 104 ~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
..|.||||+|+..|+.+++++|++.+. +++..+..+.||+++|
T Consensus 109 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~d~~g~t~l~~A 151 (244)
T 3ui2_A 109 RGGLTALHMAAGYVRPEVVEALVELGA-DIEVEDERGLTALELA 151 (244)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHH
Confidence 789999999999999999999999755 8888888999998765
No 103
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.85 E-value=5.3e-22 Score=133.84 Aligned_cols=103 Identities=19% Similarity=0.227 Sum_probs=50.9
Q ss_pred HHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChh
Q 039865 8 FVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSF-NPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQ 86 (148)
Q Consensus 8 ~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 86 (148)
+++.|+++|+++ +.++..|.||||+|+..|+.++++.|++. ++++ +.+|..|.||||+|+..|+.+++++|+++++
T Consensus 221 i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v-n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA- 297 (337)
T 4g8k_A 221 ITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSDGKTALLLAVELKLKKIAELLCKRGA- 297 (337)
T ss_dssp HHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC-
T ss_pred HHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC-
Confidence 334444444444 44444455555555555555555554443 3333 4444555555555555555555555554221
Q ss_pred HHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCC
Q 039865 87 AALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGN 129 (148)
Q Consensus 87 ~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~ 129 (148)
+.+..+|||+|+..++.+++++|+++|
T Consensus 298 ----------------d~n~~~~L~~A~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 298 ----------------STDCGDLVMTARRNYDHSLVKVLLSHG 324 (337)
T ss_dssp ----------------SSTTCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ----------------CCCCCCHHHHHHHcCCHHHHHHHHHCc
Confidence 223345666666666666666666543
No 104
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.85 E-value=6.3e-23 Score=136.07 Aligned_cols=131 Identities=17% Similarity=0.213 Sum_probs=110.0
Q ss_pred CCcHHHHHHHHHhCCcccc--------ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCH
Q 039865 3 LGHLDFVQEILRRKPELAG--------ALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHV 74 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~--------~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 74 (148)
.|..+.++.++.....+.. ..+..|.|+||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~ 86 (299)
T 1s70_B 8 QKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNV 86 (299)
T ss_dssp HHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCH
T ss_pred HHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCH
Confidence 3556777778877654311 11234679999999999999999999999998 88999999999999999999
Q ss_pred HHHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 75 NVLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 75 ~~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++.+. +++..+..+.+|+++|
T Consensus 87 ~~v~~Ll~~ga~------------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A 146 (299)
T 1s70_B 87 DMVKFLVENGAN------------INQPDNEGWIPLHAAASCGYLDIAEYLISQGA-HVGAVNSEGDTPLDIA 146 (299)
T ss_dssp HHHHHHHHTTCC------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHC
T ss_pred HHHHHHHHCCCC------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCCcCCCCCCHHHHH
Confidence 999999996555 46778899999999999999999999998755 7888888888888776
No 105
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=1.2e-20 Score=114.47 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=77.3
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCc-HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKAS-PLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~-~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
..|+.+++++|+++++++ +.++..|.| |||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|
T Consensus 53 ~~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~L 130 (156)
T 1bi7_B 53 MMGSARVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYL 130 (156)
T ss_dssp CTTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHH
Confidence 478999999999999998 999999999 999999999999999999999998 89999999999999999999999999
Q ss_pred HhcChhHHHHHhhcCCchhhhcccCCCceee
Q 039865 81 VKGRPQAALILMERGVTILHACDDNGNTILH 111 (148)
Q Consensus 81 l~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~ 111 (148)
++.+++ .+..+..|.||.+
T Consensus 131 l~~ga~------------~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 131 RAAAGG------------TRGSNHARIDAAE 149 (156)
T ss_dssp SSCC---------------------------
T ss_pred HHcCCC------------CCccCcCcCcccc
Confidence 997665 3555666666655
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=2.3e-20 Score=124.36 Aligned_cols=97 Identities=20% Similarity=0.116 Sum_probs=82.6
Q ss_pred CCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 3 LGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
.|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..++.+++++|++
T Consensus 203 ~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 203 QASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ 280 (301)
T ss_dssp TTTHHHHHHHHHHSSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 38999999999999998 999999999999999999999999999999998 8999999999999999999999999998
Q ss_pred cChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCc
Q 039865 83 GRPQAALILMERGVTILHACDDNGNTILHLAVLEKQV 119 (148)
Q Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~ 119 (148)
.+++ .|.||||+|+..|+.
T Consensus 281 ~ga~------------------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 281 AQAG------------------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHH------------------TTSSCCC--------
T ss_pred hcCC------------------CCCChhHHHHhcCCc
Confidence 4322 478999999988763
No 107
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.84 E-value=6.8e-22 Score=113.44 Aligned_cols=92 Identities=26% Similarity=0.324 Sum_probs=80.7
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhh
Q 039865 21 GALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILH 100 (148)
Q Consensus 21 ~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~ 100 (148)
...+..|.|+||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..++.+++++|++.+++ ++
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------~~ 84 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------VX 84 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------TT
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------cc
Confidence 455788999999999999999999999999998 78899999999999999999999999996555 46
Q ss_pred hcccCCCceeeeeeeeCCcceeEec
Q 039865 101 ACDDNGNTILHLAVLEKQVEVFYMD 125 (148)
Q Consensus 101 ~~~~~g~t~l~~a~~~~~~~~~~~L 125 (148)
..+..|.||||+|+..++.+++++|
T Consensus 85 ~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 85 AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 7789999999999999999988766
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=7.7e-21 Score=109.70 Aligned_cols=83 Identities=30% Similarity=0.433 Sum_probs=78.0
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++++++ +..+..|.||||+|+..++.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+
T Consensus 18 ~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll 95 (115)
T 2l6b_A 18 KNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAKKNGHHEIVKLLD 95 (115)
T ss_dssp HHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHHTTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 468899999999999997 899999999999999999999999999999998 889999999999999999999999999
Q ss_pred hcChh
Q 039865 82 KGRPQ 86 (148)
Q Consensus 82 ~~~~~ 86 (148)
+.+++
T Consensus 96 ~~ga~ 100 (115)
T 2l6b_A 96 AKGAD 100 (115)
T ss_dssp TTSSS
T ss_pred HcCCC
Confidence 97665
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.82 E-value=1.6e-23 Score=143.09 Aligned_cols=114 Identities=17% Similarity=0.235 Sum_probs=77.7
Q ss_pred CCCcHHHHHHHHHhCCccc--cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc--ccCCCCCChHHHHHHHhCCHHHH
Q 039865 2 LLGHLDFVQEILRRKPELA--GALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMC--FARDIDGKNPLHIAAIRRHVNVL 77 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~--~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~--~~~~~~g~t~l~~a~~~~~~~~~ 77 (148)
..|+.+++++|+++++... ...+..|.||||+|+..|+.+++++|+++|++.. +..+.. .||||+|+..|+.+++
T Consensus 101 ~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv 179 (376)
T 2aja_A 101 ITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVL 179 (376)
T ss_dssp HHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHH
Confidence 4689999999999887321 1234457889999999999999999999997520 222222 8999999999999999
Q ss_pred HHHHhcChhHHH-HHhhcCCchhhhcccCCCceeeeee-eeCCcceeEeccC
Q 039865 78 KELVKGRPQAAL-ILMERGVTILHACDDNGNTILHLAV-LEKQVEVFYMDFD 127 (148)
Q Consensus 78 ~~ll~~~~~~~~-~~~~~g~~~~~~~~~~g~t~l~~a~-~~~~~~~~~~L~~ 127 (148)
++|++.+++... .. +..|.||||+|+ ..|+.+++++|++
T Consensus 180 ~~Ll~~ga~~~~~~~-----------d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 180 NRLCELAPTEATAMI-----------QAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HHHHHSCGGGHHHHH-----------HHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred HHHHHcCCccchhcc-----------CCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 999997766322 12 334445555555 5555555555554
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=8.3e-19 Score=115.63 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=75.4
Q ss_pred CcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHHhc
Q 039865 4 GHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELVKG 83 (148)
Q Consensus 4 g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 83 (148)
|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.
T Consensus 183 ~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 183 TSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp TTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 8899999999999998 999999999999999999999999999999998 89999999999999999999999999984
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=5.2e-19 Score=101.34 Aligned_cols=77 Identities=27% Similarity=0.383 Sum_probs=72.8
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKEL 80 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 80 (148)
..|+.+++++|+++++++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+..++.+++++|
T Consensus 33 ~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 33 RAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 468999999999999997 889999999999999999999999999999998 88999999999999999999999876
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=2.4e-20 Score=127.10 Aligned_cols=107 Identities=14% Similarity=0.126 Sum_probs=96.5
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHhcCCCccccCC--CCCChHHHHHHHhCCHHHHHHHHhcChhHHHHHhhcCCchhhhcc
Q 039865 27 KASPLHLAAAK-GYLDIVLKLVSFNPEMCFARD--IDGKNPLHIAAIRRHVNVLKELVKGRPQAALILMERGVTILHACD 103 (148)
Q Consensus 27 g~~~l~~a~~~-g~~~~~~~Ll~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~~~~~~~~ 103 (148)
+.++||+|+.. ++.+++++|++.|+++ +..+ ..|.||||+|+..++.+++++|++.+++ ++..|
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------------vn~~d 265 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN------------VNQAD 265 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------TTCCC
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC------------CCCCC
Confidence 45799999999 9999999999999998 6777 8899999999999999999999997655 47779
Q ss_pred cCCCceeeeeeeeCCcceeEeccCCCCCCcccccCCCCCCCCCC
Q 039865 104 DNGNTILHLAVLEKQVEVFYMDFDGNNMDSNIFYGCGLSGYGLS 147 (148)
Q Consensus 104 ~~g~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~a 147 (148)
..|+||||+|+..++.+++++|++.+. +++..+..+.||+++|
T Consensus 266 ~~G~TpLh~A~~~g~~~~v~~LL~~Ga-d~~~~d~~G~TpL~~A 308 (368)
T 3jue_A 266 SAGRGPLHHATILGHTGLACLFLKRGA-DLGARDSEGRDPLTIA 308 (368)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHCcC-CCCCcCCCCCCHHHHH
Confidence 999999999999999999999998755 8888888899998876
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.76 E-value=2.1e-21 Score=132.69 Aligned_cols=108 Identities=19% Similarity=0.087 Sum_probs=90.5
Q ss_pred CCCCcHHHHHHHHHhCCcc--ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccc--CCCCCChHHHHHH-HhCCHH
Q 039865 1 SLLGHLDFVQEILRRKPEL--AGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFA--RDIDGKNPLHIAA-IRRHVN 75 (148)
Q Consensus 1 a~~g~~~~v~~ll~~~~~~--~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~--~~~~g~t~l~~a~-~~~~~~ 75 (148)
|..|+.++|++|+++++++ .+..+.. .||||+|+..|+.+++++|+++|+++ .. .+..|.||||+|+ ..|+.+
T Consensus 136 a~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 136 AENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp HHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred HHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHH
Confidence 3579999999999999742 0222222 89999999999999999999999987 55 7788999999999 999999
Q ss_pred HHHHHHhcChhHHHHHhhcCCchhhhcccCCCceeeeeeeeCCcceeEeccCCC
Q 039865 76 VLKELVKGRPQAALILMERGVTILHACDDNGNTILHLAVLEKQVEVFYMDFDGN 129 (148)
Q Consensus 76 ~~~~ll~~~~~~~~~~~~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~~ 129 (148)
++++|++.+ . .|.|||++|+..|+.+++++|++++
T Consensus 214 iv~~Ll~~g-a------------------~~~taL~~Aa~~g~~evv~lL~~~g 248 (376)
T 2aja_A 214 VINFLLDCP-V------------------MLAYAEIHEFEYGEKYVNPFIARHV 248 (376)
T ss_dssp HHHHHTTSH-H------------------HHHHHHHCTTTTTTTTHHHHHHHHH
T ss_pred HHHHHHhCC-C------------------ccchHHHHHHHCCCHHHHHHHHhcC
Confidence 999999832 1 1579999999999999999998754
No 114
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=5.5e-18 Score=119.77 Aligned_cols=84 Identities=20% Similarity=0.165 Sum_probs=78.8
Q ss_pred CCCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHhCCHHHHHHHH
Q 039865 2 LLGHLDFVQEILRRKPELAGALDSRKASPLHLAAAKGYLDIVLKLVSFNPEMCFARDIDGKNPLHIAAIRRHVNVLKELV 81 (148)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~g~~~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 81 (148)
..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 183 ~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll 260 (497)
T 3lvq_E 183 NQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLE 260 (497)
T ss_dssp CTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 479999999999999998 999999999999999999999999999999998 899999999999999999999999999
Q ss_pred hcChhH
Q 039865 82 KGRPQA 87 (148)
Q Consensus 82 ~~~~~~ 87 (148)
+.+++.
T Consensus 261 ~~ga~~ 266 (497)
T 3lvq_E 261 QAQAGT 266 (497)
T ss_dssp HTCC--
T ss_pred HhCCCC
Confidence 977664
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=65.50 E-value=20 Score=25.14 Aligned_cols=45 Identities=20% Similarity=0.194 Sum_probs=28.8
Q ss_pred CcHHHHHHHHHhCCcccccc-------------CCCCCcHHHHHHHcCCHHHHHHHHh
Q 039865 4 GHLDFVQEILRRKPELAGAL-------------DSRKASPLHLAAAKGYLDIVLKLVS 48 (148)
Q Consensus 4 g~~~~v~~ll~~~~~~~~~~-------------~~~g~~~l~~a~~~g~~~~~~~Ll~ 48 (148)
|+...|+..+..|+++.... -..|.|.+|.|++..+.+++..|+.
T Consensus 33 ~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 33 GDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp TCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred CChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 67778888888887762111 1236677777777766666666665
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=50.91 E-value=15 Score=16.09 Aligned_cols=17 Identities=35% Similarity=0.413 Sum_probs=11.4
Q ss_pred HHHHHHcCCHHHHHHHH
Q 039865 31 LHLAAAKGYLDIVLKLV 47 (148)
Q Consensus 31 l~~a~~~g~~~~~~~Ll 47 (148)
+..||+.|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677777777766554
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=35.30 E-value=1.2e+02 Score=21.50 Aligned_cols=48 Identities=17% Similarity=0.110 Sum_probs=37.3
Q ss_pred HHcCCHHHHHHHHhcCCCcccc-------------CCCCCChHHHHHHHhCCHHHHHHHHh
Q 039865 35 AAKGYLDIVLKLVSFNPEMCFA-------------RDIDGKNPLHIAAIRRHVNVLKELVK 82 (148)
Q Consensus 35 ~~~g~~~~~~~Ll~~~~~~~~~-------------~~~~g~t~l~~a~~~~~~~~~~~ll~ 82 (148)
+..|+...|+..+..|.++... .-.-|.|-+|+|.++.+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3468888888888877665211 12469999999999999999999987
Done!