Your job contains 1 sequence.
>039866
MSTAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVD
PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA
IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI
GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS
SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNF
EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039866
(418 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 1979 1.4e-204 1
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 1945 5.8e-201 1
ZFIN|ZDB-GENE-030131-666 - symbol:psmc3 "proteasome (pros... 1622 9.7e-167 1
UNIPROTKB|F1PBK7 - symbol:PSMC3 "Uncharacterized protein"... 1618 2.6e-166 1
UNIPROTKB|P17980 - symbol:PSMC3 "26S protease regulatory ... 1618 2.6e-166 1
UNIPROTKB|F1SID4 - symbol:PSMC3 "Uncharacterized protein"... 1617 3.3e-166 1
MGI|MGI:1098754 - symbol:Psmc3 "proteasome (prosome, macr... 1617 3.3e-166 1
RGD|61905 - symbol:Psmc3 "proteasome (prosome, macropain)... 1617 3.3e-166 1
UNIPROTKB|Q6P6U2 - symbol:Psmc3 "26S protease regulatory ... 1617 3.3e-166 1
UNIPROTKB|O42586 - symbol:psmc3-b "26S protease regulator... 1601 1.6e-164 1
UNIPROTKB|J9NWA6 - symbol:LOC100687152 "Uncharacterized p... 1599 2.7e-164 1
WB|WBGene00004505 - symbol:rpt-5 species:6239 "Caenorhabd... 1588 3.9e-163 1
UNIPROTKB|O76371 - symbol:rpt-5 "Protein RPT-5" species:6... 1588 3.9e-163 1
FB|FBgn0028684 - symbol:Rpt5 "Regulatory particle triple-... 1546 1.1e-158 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 1363 5.4e-158 2
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 1363 5.4e-158 2
ASPGD|ASPL0000010049 - symbol:AN4236 species:162425 "Emer... 1517 1.3e-155 1
CGD|CAL0002261 - symbol:RPT5 species:5476 "Candida albica... 1480 1.1e-151 1
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 1475 3.7e-151 1
SGD|S000005643 - symbol:RPT5 "ATPase of the 19S regulator... 1472 7.6e-151 1
POMBASE|SPAC3A11.12c - symbol:rpt5 "19S proteasome regula... 1447 3.4e-148 1
UNIPROTKB|E9PM69 - symbol:PSMC3 "26S protease regulatory ... 1445 5.5e-148 1
UNIPROTKB|O42587 - symbol:psmc3-a "26S protease regulator... 1441 1.5e-147 1
UNIPROTKB|F1NDQ1 - symbol:PSMC3 "Uncharacterized protein"... 1437 3.9e-147 1
UNIPROTKB|F1P3L9 - symbol:PSMC3 "Uncharacterized protein"... 1435 6.4e-147 1
UNIPROTKB|F1MWE0 - symbol:PSMC3 "Uncharacterized protein"... 1293 7.1e-132 1
UNIPROTKB|E9PMD8 - symbol:PSMC3 "26S protease regulatory ... 1021 4.7e-103 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 899 4.0e-90 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 866 1.3e-86 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 866 1.3e-86 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 864 2.0e-86 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 864 2.0e-86 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 863 2.6e-86 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 863 2.6e-86 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 863 2.6e-86 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 863 2.6e-86 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 863 2.6e-86 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 863 2.6e-86 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 862 3.3e-86 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 862 3.3e-86 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 858 8.9e-86 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 857 1.1e-85 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 856 1.4e-85 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 848 1.0e-84 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 848 1.0e-84 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 844 2.7e-84 1
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 840 7.2e-84 1
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 811 8.5e-81 1
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 803 6.0e-80 1
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 802 7.6e-80 1
FB|FBgn0037742 - symbol:Rpt3R "Regulatory particle triple... 801 9.7e-80 1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 799 1.6e-79 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 794 5.4e-79 1
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 792 8.7e-79 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 791 1.1e-78 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 789 1.8e-78 1
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 789 1.8e-78 1
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 789 1.8e-78 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 784 6.2e-78 1
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 783 7.9e-78 1
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 781 1.3e-77 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 779 2.1e-77 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 778 2.7e-77 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 778 2.7e-77 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 777 3.4e-77 1
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 777 3.4e-77 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 777 3.4e-77 1
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 777 3.4e-77 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 777 3.4e-77 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 777 3.4e-77 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 777 3.4e-77 1
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 777 3.4e-77 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 776 4.3e-77 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 776 4.3e-77 1
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 776 4.3e-77 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 776 4.3e-77 1
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 776 4.3e-77 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 775 5.5e-77 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 775 5.5e-77 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 775 5.5e-77 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 775 5.5e-77 1
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 775 5.5e-77 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 775 5.5e-77 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 775 5.5e-77 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 775 5.5e-77 1
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 775 5.5e-77 1
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 774 7.1e-77 1
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 774 7.1e-77 1
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 774 7.1e-77 1
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 774 7.1e-77 1
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 774 7.1e-77 1
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 774 7.1e-77 1
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 774 7.1e-77 1
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 774 7.1e-77 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 774 7.1e-77 1
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 774 7.1e-77 1
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 774 7.1e-77 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 773 9.0e-77 1
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 772 1.1e-76 1
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 771 1.5e-76 1
WARNING: Descriptions of 642 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 1979 (701.7 bits), Expect = 1.4e-204, P = 1.4e-204
Identities = 391/424 (92%), Positives = 408/424 (96%)
Query: 1 MSTAMVED-SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKEN 59
M+T MVED S+ E+DQL+SM+T+DI RA+RLLDNEIR+LKE+ QRTNLE DSYKEK+KEN
Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKEN 60
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPS 114
QEKIKLNKQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTS +
Sbjct: 61 QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
Query: 115 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 174
VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180
Query: 175 QELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 234
QEL+EAIVLPMTHKERF+KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240
Query: 235 LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 294
LVQMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
Query: 295 QLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTV 354
QLDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIE PHP+EEARARILQIHSRKM V
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360
Query: 355 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 414
HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL
Sbjct: 361 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 420
Query: 415 NYYA 418
NYYA
Sbjct: 421 NYYA 424
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 1945 (689.7 bits), Expect = 5.8e-201, P = 5.8e-201
Identities = 386/423 (91%), Positives = 403/423 (95%)
Query: 1 MSTAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQ 60
M+TAM ED++ E DQL+SMTTDDI RASRLL NEIR+LKEE QRTNL+L+S KEK+KENQ
Sbjct: 1 MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQ 60
Query: 61 EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSV 115
EKIKLNKQLPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTS + V
Sbjct: 61 EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
Query: 116 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 175
VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
Sbjct: 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
Query: 176 ELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 235
EL+EAIVLPMTHKE+F+KLG+RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
Sbjct: 181 ELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
Query: 236 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 295
VQMFIGDGAKLVRDAF LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
Query: 296 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH 355
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE PHP+EEAR RILQIHSRKM V+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVN 360
Query: 356 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 415
DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
Sbjct: 361 ADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
Query: 416 YYA 418
YYA
Sbjct: 421 YYA 423
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 315/418 (75%), Positives = 370/418 (88%)
Query: 6 VEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKL 65
VED I ++ L M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+
Sbjct: 13 VEDG-IGEEVLK-MSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKV 70
Query: 66 NKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVD 120
NK LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 71 NKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVD 129
Query: 121 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA 180
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EA
Sbjct: 130 AEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEA 189
Query: 181 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 240
IVLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFI
Sbjct: 190 IVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFI 249
Query: 241 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS 300
GDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 250 GDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 309
Query: 301 SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNF 360
+ ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVNF
Sbjct: 310 PNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNF 369
Query: 361 EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
EELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+NHED+ EGI++VQAKKKA+L YYA
Sbjct: 370 EELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA 427
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 1618 (574.6 bits), Expect = 2.6e-166, P = 2.6e-166
Identities = 312/417 (74%), Positives = 367/417 (88%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 25 EQDGIGEEVLK-MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 83
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 84 KTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 142
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAI
Sbjct: 143 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAI 202
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIG
Sbjct: 203 VLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG 262
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 263 DGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 322
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+E
Sbjct: 323 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 382
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 383 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 1618 (574.6 bits), Expect = 2.6e-166, P = 2.6e-166
Identities = 312/417 (74%), Positives = 367/417 (88%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 25 EQDGIGEEVLK-MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 83
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 84 KTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 142
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAI
Sbjct: 143 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAI 202
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIG
Sbjct: 203 VLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG 262
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 263 DGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 322
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+E
Sbjct: 323 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 382
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 383 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 1617 (574.3 bits), Expect = 3.3e-166, P = 3.3e-166
Identities = 311/417 (74%), Positives = 367/417 (88%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 32 EQDGIGEEVLK-MSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 90
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 91 KTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 149
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAI
Sbjct: 150 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAI 209
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIG
Sbjct: 210 VLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG 269
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 270 DGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 329
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+E
Sbjct: 330 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 389
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 446
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 1617 (574.3 bits), Expect = 3.3e-166, P = 3.3e-166
Identities = 311/417 (74%), Positives = 367/417 (88%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 28 EQDGIGEEVLK-MSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 86
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 87 KTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 145
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAI
Sbjct: 146 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAI 205
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIG
Sbjct: 206 VLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG 265
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 266 DGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 325
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+E
Sbjct: 326 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 385
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 386 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 1617 (574.3 bits), Expect = 3.3e-166, P = 3.3e-166
Identities = 311/417 (74%), Positives = 367/417 (88%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 25 EQDGIGEEVLK-MSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 83
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 84 KTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 142
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAI
Sbjct: 143 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAI 202
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIG
Sbjct: 203 VLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG 262
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 263 DGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 322
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+E
Sbjct: 323 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 382
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 383 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 1617 (574.3 bits), Expect = 3.3e-166, P = 3.3e-166
Identities = 311/417 (74%), Positives = 367/417 (88%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 28 EQDGIGEEVLK-MSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 86
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 87 KTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 145
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAI
Sbjct: 146 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAI 205
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIG
Sbjct: 206 VLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG 265
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 266 DGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 325
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+E
Sbjct: 326 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 385
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELAR TDDFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 386 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 1601 (568.6 bits), Expect = 1.6e-164, P = 1.6e-164
Identities = 306/405 (75%), Positives = 360/405 (88%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
M+T++II+ +RLLD+EI+++K E+ R EL + ++K+KEN EKIK+NK LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVN 133
+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQK 193
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE+F+
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 179
Query: 194 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 253
LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF L
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSL 239
Query: 254 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 313
AKEK+P IIFIDE+DAIG KRFDSE +GDREVQRTMLELLNQLDGF ++KVIAATNR
Sbjct: 240 AKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNR 299
Query: 314 ADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGA 373
DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR TDDFNGA
Sbjct: 300 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGA 359
Query: 374 QLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
Q KAVCVEAG++ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 360 QCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 1599 (567.9 bits), Expect = 2.7e-164, P = 2.7e-164
Identities = 308/417 (73%), Positives = 364/417 (87%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 20 EQDGIGEEVLK-MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 78
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 79 KTLPYLVSNVIELLDVHPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 137
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAI
Sbjct: 138 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAI 197
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM HKE+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIG
Sbjct: 198 VLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG 257
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DA GTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 258 DGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 317
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++KVIAATNR DILDPAL+RSGRLD+KIE P P+EEARARI+QIHSRKM V PDVN+E
Sbjct: 318 NTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE 377
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELAR DDFNGAQ KAVCVEAGM+ALRR TE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 378 ELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYMEGILEVQAKKKANLQYYA 434
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 1588 (564.1 bits), Expect = 3.9e-163, P = 3.9e-163
Identities = 310/418 (74%), Positives = 363/418 (86%)
Query: 6 VEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKL 65
VED+ D+++ M+T+D+ + LLDNEIR+++ E+QR N + KE++KEN E+IK+
Sbjct: 18 VEDAI--DEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKV 75
Query: 66 NKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVD 120
NK LPYLV N+VE+L++ ED EE+GAN+DLD+Q K KC V+KTS + VVGLVD
Sbjct: 76 NKTLPYLVSNVVELLDL--EDNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVD 132
Query: 121 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA 180
PD+LKPGDLVGVNKDSYLIL+ LP+EYDSRVKAMEVDE+PTE Y+DIGG +KQIQELIEA
Sbjct: 133 PDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEA 192
Query: 181 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 240
+VLPMTHK+RF LG+ PPKGVL+YGPPGTGKT+MARA AAQT +TFLKLAGPQLVQMFI
Sbjct: 193 VVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFI 252
Query: 241 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS 300
GDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 253 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
Query: 301 SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNF 360
+D IKVIAATNR D+LDPAL+RSGRLDRKIELPHP+E+ARARI+QIHSRKM V+ DVNF
Sbjct: 313 PNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNF 372
Query: 361 EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
EELAR TDDFNGAQ KAVCVEAGM+ALRRDATE+ HEDF + I++VQAKKKASLNYYA
Sbjct: 373 EELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 1588 (564.1 bits), Expect = 3.9e-163, P = 3.9e-163
Identities = 310/418 (74%), Positives = 363/418 (86%)
Query: 6 VEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKL 65
VED+ D+++ M+T+D+ + LLDNEIR+++ E+QR N + KE++KEN E+IK+
Sbjct: 18 VEDAI--DEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKV 75
Query: 66 NKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVD 120
NK LPYLV N+VE+L++ ED EE+GAN+DLD+Q K KC V+KTS + VVGLVD
Sbjct: 76 NKTLPYLVSNVVELLDL--EDNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVD 132
Query: 121 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA 180
PD+LKPGDLVGVNKDSYLIL+ LP+EYDSRVKAMEVDE+PTE Y+DIGG +KQIQELIEA
Sbjct: 133 PDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEA 192
Query: 181 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 240
+VLPMTHK+RF LG+ PPKGVL+YGPPGTGKT+MARA AAQT +TFLKLAGPQLVQMFI
Sbjct: 193 VVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFI 252
Query: 241 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS 300
GDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF
Sbjct: 253 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
Query: 301 SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNF 360
+D IKVIAATNR D+LDPAL+RSGRLDRKIELPHP+E+ARARI+QIHSRKM V+ DVNF
Sbjct: 313 PNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNF 372
Query: 361 EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
EELAR TDDFNGAQ KAVCVEAGM+ALRRDATE+ HEDF + I++VQAKKKASLNYYA
Sbjct: 373 EELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNYYA 430
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 1546 (549.3 bits), Expect = 1.1e-158, P = 1.1e-158
Identities = 298/410 (72%), Positives = 357/410 (87%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
+++ M+TD+I+ +RL+DNEI+++K E+ R E+ + EK+K+N EKIK+NK LPYLV
Sbjct: 24 EKVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLV 83
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGD 128
N++E+L+++P++E E+DG+ LD+QRKGKC V+KTS + V+GLVD +KLKPGD
Sbjct: 84 SNVIELLDVDPQEE-EDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGD 142
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
L GVNKD YLIL+TLP+EYD+RVKAMEVDE+PTE ++DIGGL+KQIQELIEA+VLPMTHK
Sbjct: 143 LAGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHK 202
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
E+F+ LG+ PPKGV+LYGPPGTGKTL+ARACAAQT +TFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 203 EKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVR 262
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQL+GFSS IKVI
Sbjct: 263 DAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLNGFSSTADIKVI 322
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTD 368
AATNR DIL PAL+RSGRLDRKIE PHP+EEARARI+QIHSRKM V DVNFEEL+RSTD
Sbjct: 323 AATNRVDIL-PALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTD 381
Query: 369 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
DFNGAQ KAVCVEAGM+ALRR A V HEDF + I++VQAKKKA+LNYYA
Sbjct: 382 DFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYYA 431
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 1363 (484.9 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 258/327 (78%), Positives = 300/327 (91%)
Query: 96 DLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 150
D+D +++GKC+V+KTS + V GL+D +LKPGDLVGVNKDSYLI+D LP EYD+R
Sbjct: 112 DIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNR 171
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
VKAMEV EKP+EDY+DIGGL+KQI++L+EAIVLPM HKE+F+K+G++PPKGVL++GPPGT
Sbjct: 172 VKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGT 231
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARACA+QTNATFLKLAGPQLVQMFIGDGAK+VRDAF LAKEK+P IIFIDE+DAI
Sbjct: 232 GKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAI 291
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
GTKRFDSE+SGDREVQRTMLELLNQLDGFS+DD +KVIAATNR D LDPAL+RSGRLDRK
Sbjct: 292 GTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRK 351
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
IELPHP+EE+RARILQIHSRKM VH DVNFEELARSTDDFNGAQLKAVCVEAGM+ALRR
Sbjct: 352 IELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRG 411
Query: 391 ATEVNHEDFNEGIIQVQAKKKASLNYY 417
ATE++HEDF EGI V +KKK++LNY+
Sbjct: 412 ATEIDHEDFVEGITSVLSKKKSTLNYF 438
Score = 198 (74.8 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 48/138 (34%), Positives = 77/138 (55%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E+ N+E+ + ++ +I L+D EI++LK E R E + +EK+K+N EKI LN
Sbjct: 10 EEVNVEE--IEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKIHLN 67
Query: 67 KQLPYLVGNIVEILEMNPEDEAEE--DGANI-------------DLDSQRKGKCVVLKTS 111
K LPYLV N+VE L++ E+E E D ++ D+D +++GKC+V+KTS
Sbjct: 68 KMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGKCMVIKTS 127
Query: 112 YPSVVGLVDPDKLKPGDL 129
+ L P + +L
Sbjct: 128 TRQTIFLPVPGLIDASEL 145
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 1363 (484.9 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 258/327 (78%), Positives = 300/327 (91%)
Query: 96 DLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 150
D+D +++GKC+V+KTS + V GL+D +LKPGDLVGVNKDSYLI+D LP EYD+R
Sbjct: 112 DIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNR 171
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
VKAMEV EKP+EDY+DIGGL+KQI++L+EAIVLPM HKE+F+K+G++PPKGVL++GPPGT
Sbjct: 172 VKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGT 231
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARACA+QTNATFLKLAGPQLVQMFIGDGAK+VRDAF LAKEK+P IIFIDE+DAI
Sbjct: 232 GKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAI 291
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
GTKRFDSE+SGDREVQRTMLELLNQLDGFS+DD +KVIAATNR D LDPAL+RSGRLDRK
Sbjct: 292 GTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRK 351
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
IELPHP+EE+RARILQIHSRKM VH DVNFEELARSTDDFNGAQLKAVCVEAGM+ALRR
Sbjct: 352 IELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRG 411
Query: 391 ATEVNHEDFNEGIIQVQAKKKASLNYY 417
ATE++HEDF EGI V +KKK++LNY+
Sbjct: 412 ATEIDHEDFVEGITSVLSKKKSTLNYF 438
Score = 198 (74.8 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 48/138 (34%), Positives = 77/138 (55%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E+ N+E+ + ++ +I L+D EI++LK E R E + +EK+K+N EKI LN
Sbjct: 10 EEVNVEE--IEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKIHLN 67
Query: 67 KQLPYLVGNIVEILEMNPEDEAEE--DGANI-------------DLDSQRKGKCVVLKTS 111
K LPYLV N+VE L++ E+E E D ++ D+D +++GKC+V+KTS
Sbjct: 68 KMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKRGKCMVIKTS 127
Query: 112 YPSVVGLVDPDKLKPGDL 129
+ L P + +L
Sbjct: 128 TRQTIFLPVPGLIDASEL 145
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 1517 (539.1 bits), Expect = 1.3e-155, P = 1.3e-155
Identities = 292/410 (71%), Positives = 353/410 (86%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
ED ++ D+++ + +T DII+ R+L+NE+R++K E QR E ++ KEKVK+NQEKI+ N
Sbjct: 48 EDDDLLDEEILNSSTADIIKRRRMLENELRIMKSEYQRLTHEQNTMKEKVKDNQEKIENN 107
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
+QLPYLVGN+VE+L+++ E EA E+GANIDLD+ R GK V+KTS Y ++GLVD
Sbjct: 108 RQLPYLVGNVVELLDLDVEAEAAEEGANIDLDATRVGKSAVIKTSTRQTIYLPLIGLVDH 167
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
+KLKPGDL+GVNKDSYLILDTLP+EYD+RVKAMEVDEKPTE Y DIGGL+KQI+E++EAI
Sbjct: 168 EKLKPGDLIGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAI 227
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
V PM ERF+KLG++ PKG L+YGPPGTGKTL+ARACAA+TNATFLKLAGPQLVQMFIG
Sbjct: 228 VWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIG 287
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRD F LAKEK+P IIFIDE+DA+GTKRFDSE SGDREVQRTMLELLNQLDGF+S
Sbjct: 288 DGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFAS 347
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
DDRIKV+AATNR D+LDPAL+RSGRLDRKIE P P+EEARA ILQIHSRKMTV VN+
Sbjct: 348 DDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRKMTVEDSVNWA 407
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 411
ELARSTD+F GAQLKAVCVEAGM+ALR+ +++ HE++ + I +VQAKKK
Sbjct: 408 ELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENYVDAIAEVQAKKK 457
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 1480 (526.0 bits), Expect = 1.1e-151, P = 1.1e-151
Identities = 286/418 (68%), Positives = 347/418 (83%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
++ N+ D ++ + +T DII ++LLDN+I+V++ E QR N E E++K+NQEKI N
Sbjct: 37 QEENVIDQEILNSSTSDIINRTKLLDNDIKVMRSESQRLNHEKTVMLERIKDNQEKINNN 96
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
KQLPYLVGN+VE+L ++ + EA E GANID+D+ R GK V+KTS + ++GLVDP
Sbjct: 97 KQLPYLVGNVVELLNLDADKEASEQGANIDIDAARAGKSAVIKTSTRQTIFLPMIGLVDP 156
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
KLKP DL+GVNKDSYL+LDTLPSEYDSRVKAMEVDEKPTEDY+DIGGL+KQI+ELIEA+
Sbjct: 157 SKLKPNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAV 216
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPM ++F+ LG++PPKG L+YGPPGTGKTL+ARACAAQ+ ATFLKLA PQLVQMFIG
Sbjct: 217 VLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIG 276
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDS+ SGDREVQRTMLELLNQLDGF S
Sbjct: 277 DGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGS 336
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTV-HPDVNF 360
DDR+KV+AATNR D LDPAL+RSGRLDRKIE P PSEEAR +L+IH+RK+ + VN+
Sbjct: 337 DDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNW 396
Query: 361 EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELARSTD+FNGAQLKAV VEAGM+ALR + + HEDF E I +VQA+K S+N+YA
Sbjct: 397 RELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVEAISEVQARKSKSVNFYA 454
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
Identities = 287/417 (68%), Positives = 346/417 (82%)
Query: 2 STAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQE 61
S E + D++ MT D++ R ++LL+NE +VL+ E +LE+DS ++++KEN +
Sbjct: 12 SLPQAEKEAVIPDEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENND 71
Query: 62 KIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDP 121
K+++N QLP+LV N+VEI++M + E + + S R+ + +YP G+VD
Sbjct: 72 KLQVNTQLPHLVANVVEIIDMVLDGETQPSKCVVVKASTRQ----TIFLAYP---GIVDV 124
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
DKL+PGDLVG+NKDSY+ILDTLP EYDSRVKAME+DEKPTE+Y+DIGGL+KQIQEL+EA+
Sbjct: 125 DKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAV 184
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
VLPMTHKERF+ +G++PPKGVL+YGPPGTGKTL+ARACAAQTN+T+LKLAGPQLVQMFIG
Sbjct: 185 VLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIG 244
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
DGAKLVRDAF LAKEK P IIFIDE+DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS
Sbjct: 245 DGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 304
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
D IKVIAATNR DILDPAL+RSGRLDRKIE P P+EEARA ILQIHSRKM V DVNF+
Sbjct: 305 DANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFD 364
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ELARS++DFNGAQLKAVCVEAGM+ALRR TE+ H DF EG ++V AKKK +L YYA
Sbjct: 365 ELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKKKKTLEYYA 421
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 1472 (523.2 bits), Expect = 7.6e-151, P = 7.6e-151
Identities = 287/416 (68%), Positives = 350/416 (84%)
Query: 13 DDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYL 72
D ++ +++T ++ ++LLDNEIR+ + ELQR + E + EK+K+N+EKIK N+QLPYL
Sbjct: 19 DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYL 78
Query: 73 VGNIVEILEMNP-ED----EAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPD 122
V N+VE+++MN ED E+ G N++LD+ GK V+KTS + +VGLVDPD
Sbjct: 79 VANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPD 138
Query: 123 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIV 182
KLKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPTE Y+D+GGL+KQI+EL+EAIV
Sbjct: 139 KLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIV 198
Query: 183 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 242
LPM ++F+ +G+R PKG L+YGPPGTGKTL+ARACAAQTNATFLKLA PQLVQM+IG+
Sbjct: 199 LPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGE 258
Query: 243 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 302
GAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE SGDREVQRTMLELLNQLDGFSSD
Sbjct: 259 GAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSD 318
Query: 303 DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEE 362
DR+KV+AATNR D+LDPAL+RSGRLDRKIE P PSE++RA+ILQIHSRKMT D+N++E
Sbjct: 319 DRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQE 378
Query: 363 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
LARSTD+FNGAQLKAV VEAGM+ALR + V HEDF EGI +VQA+K S+++YA
Sbjct: 379 LARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFYA 434
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 281/413 (68%), Positives = 344/413 (83%)
Query: 11 IEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLP 70
IE + L++ D++ +RLL+N+I+V+K E QR E + EK+KENQEKI NK LP
Sbjct: 27 IEQEILAA-GIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLP 85
Query: 71 YLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLK 125
YLVGN+VEIL+M P++ ++ AN + ++ R GK V+KTS + ++GLV+P++L
Sbjct: 86 YLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELH 145
Query: 126 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPM 185
PGDL+GVNKDSYLI+D LPSEYDSRVKAMEVDEKPTE Y+DIGGL KQI+EL EAIVLPM
Sbjct: 146 PGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPM 205
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
++F+KLGV+PPKG L++GPPGTGKTL+ARACAAQ+NATFLKLA PQLVQMFIGDGAK
Sbjct: 206 QQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAK 265
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
LVRDAF LAKEKSP IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGFSSDDR+
Sbjct: 266 LVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRV 325
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
KVIAATNR D LDPAL+RSGRLDRK+E P P+EEAR IL+IHSRKM + D+N+EELAR
Sbjct: 326 KVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELAR 385
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
STD++NGA LK+VCVEAGM+ALR+ T++NHE F +GI++VQ +K +L Y+A
Sbjct: 386 STDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYFA 438
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 1445 (513.7 bits), Expect = 5.5e-148, P = 5.5e-148
Identities = 292/399 (73%), Positives = 338/399 (84%)
Query: 30 LLDN-EIRVLKEELQRT---NLELDSYKEKV-KENQEKIKLNKQLPYLVGNIVEILEMNP 84
LL N E V ++E T E D E+V K + E+I Q L+ + +++L+++P
Sbjct: 3 LLPNIESPVTRQEKMATVWDEAEQDGIGEEVLKMSTEEII---QRTRLLDSEIKLLDVDP 59
Query: 85 EDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVNKDSYLI 139
D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGDLVGVNKDSYLI
Sbjct: 60 NDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLI 118
Query: 140 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPP 199
L+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE+F+ LG++PP
Sbjct: 119 LETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPP 178
Query: 200 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 259
KGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+P
Sbjct: 179 KGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 238
Query: 260 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 319
IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATNR DILDP
Sbjct: 239 SIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDP 298
Query: 320 ALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVC 379
AL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR TDDFNGAQ KAVC
Sbjct: 299 ALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVC 358
Query: 380 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
VEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 359 VEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 397
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 280/385 (72%), Positives = 332/385 (86%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
+++ M+T++II+ +RLLD+EI+++K E+ R EL + ++K+KEN EKIK+NK LPYLV
Sbjct: 15 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLV 74
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGD 128
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGD
Sbjct: 75 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 133
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HK
Sbjct: 134 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 193
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 194 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 253
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 254 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVI 313
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTD 368
AATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR
Sbjct: 314 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPT 373
Query: 369 DFNGAQLKAVCVEAGMLALRRDATE 393
K VEAGM+ALRR ATE
Sbjct: 374 ISMALSAKQFGVEAGMIALRRGATE 398
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 280/385 (72%), Positives = 329/385 (85%)
Query: 36 RVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPE-DEAEEDGAN 94
+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E ++ E E G+
Sbjct: 1 QIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEERSVHHFCQEGEGIGSP 60
Query: 95 IDLDSQRKGKCVV-LKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKA 153
+ + + + V +T + V+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKA
Sbjct: 61 LVIGDMARCQTVYDSETYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKA 120
Query: 154 MEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 213
MEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE+F+ LG++PPKGVL+YGPPGTGKT
Sbjct: 121 MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKT 180
Query: 214 LMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTK 273
L+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTK
Sbjct: 181 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 240
Query: 274 RFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEL 333
RFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATNR DILDPAL+RSGRLDRKIE
Sbjct: 241 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 300
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 393
P P+EEARARI+QIHSRKM V PDVN+EELAR TDDFNGAQ KAVCVEAGM+ALRR ATE
Sbjct: 301 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATE 360
Query: 394 VNHEDFNEGIIQVQAKKKASLNYYA 418
+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 361 LTHEDYMEGILEVQAKKKANLQYYA 385
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
Identities = 282/388 (72%), Positives = 331/388 (85%)
Query: 36 RVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPE-DEAEEDGAN 94
+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E ++ E E G+
Sbjct: 2 QIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEERSVHHFCQEGEGIGSP 61
Query: 95 IDLDSQRK---G-KCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 150
+ S++K G + +T + V+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSR
Sbjct: 62 LIYTSRKKEENGLELTNSQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSR 121
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
VKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE+F+ LG++PPKGVL+YGPPGT
Sbjct: 122 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 181
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAI
Sbjct: 182 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 241
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
GTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATNR DILDPAL+RSGRLDRK
Sbjct: 242 GTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRK 301
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
IE P P+EEARARI+QIHSRKM V PDVN+EELAR TDDFNGAQ KAVCVEAGM+ALRR
Sbjct: 302 IEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRG 361
Query: 391 ATEVNHEDFNEGIIQVQAKKKASLNYYA 418
ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 362 ATELTHEDYMEGILEVQAKKKANLQYYA 389
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
Identities = 269/406 (66%), Positives = 316/406 (77%)
Query: 29 RLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEA 88
+++ +E+ + ELQ ++ EK+K N+ L + L+ V+ + ED A
Sbjct: 54 KIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLD--VDPNDQE-EDGA 110
Query: 89 EEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYD 148
D + K +T + V+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYD
Sbjct: 111 NIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYD 170
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQE----------------LIEAIVLPMTHKERFQ 192
SRVKAMEVDE+PTE Y+DIGGL+KQIQE L+EAIVLPM HKE+F+
Sbjct: 171 SRVKAMEVDERPTEQYSDIGGLDKQIQEVREARHLTSLLCLSASLVEAIVLPMNHKEKFE 230
Query: 193 KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQ 252
LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF
Sbjct: 231 NLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFA 290
Query: 253 LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATN 312
LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATN
Sbjct: 291 LAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATN 350
Query: 313 RADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNG 372
R DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR TDDFNG
Sbjct: 351 RVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 410
Query: 373 AQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
AQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 411 AQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 456
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 115/179 (64%), Positives = 148/179 (82%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLN 66
E I ++ L M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+N
Sbjct: 26 EQDGIGEEVLK-MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVN 84
Query: 67 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDP 121
K LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD
Sbjct: 85 KTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 143
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA 180
+KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQE+ EA
Sbjct: 144 EKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEVREA 202
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 194/261 (74%), Positives = 233/261 (89%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVN 133
+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQK 193
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE+F+
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 179
Query: 194 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 253
LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF L
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 239
Query: 254 AKEKSPCIIFIDEIDAIGTKR 274
AKEK+P IIFIDE+DAIGTKR
Sbjct: 240 AKEKAPSIIFIDELDAIGTKR 260
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 188/413 (45%), Positives = 273/413 (66%)
Query: 7 EDSNIEDDQ--LSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQE-KI 63
E+ I D+ + + +++ +R+ + E R+LK EL++ LE ++ + +KEN+ +
Sbjct: 24 EEKEINDNSNLKNDLLKEELQEKARIAELESRILKLELEKKELERENL-QLMKENEILRR 82
Query: 64 KLNKQL--PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDP 121
+L++ P +VG +V D+ E + + S G ++ S+ V+P
Sbjct: 83 ELDRMRVPPLIVGTVV--------DKVGE--RKVVVKSST-GPSFLVNVSH-----FVNP 126
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI 181
D L PG V +N+ + ++D LP D R KAMEVDE+P Y DIGGLEKQ+QE+ E +
Sbjct: 127 DDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVV 186
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
LP+ H E F+K+G+ PPKG+LLYGPPGTGKTL+A+A A +TNATF+++ G +LV+ FIG
Sbjct: 187 ELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIG 246
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
+GA LV+D F+LAKEK+P IIFIDEIDAI KR D+ GDREVQRT+++LL ++DGF +
Sbjct: 247 EGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDA 306
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+K+I ATNR DILDPA++R GR DR IE+P P E+ R IL+IH+RKM + DVN E
Sbjct: 307 RGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLE 366
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 414
E+A+ T+ GA+LKA+C EAGM A+R V +DF + + ++ KKK +
Sbjct: 367 EIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKV 419
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 174/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 72 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 129
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 130 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 175
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 176 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 235
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 236 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 295
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 296 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV +EL + DD +GA +KA+C EAG++ALR +V +
Sbjct: 356 DEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 415
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 416 EDFKKSKENVLYKKQ 430
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 174/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 71 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 128
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 129 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 174
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 175 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 234
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 235 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 294
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 295 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 354
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV +EL + DD +GA +KA+C EAG++ALR +V +
Sbjct: 355 DEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 414
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 415 EDFKKSKENVLYKKQ 429
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 173/375 (46%), Positives = 249/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
++++E R L EK +E + K+ + P VGN+ EI++ N + G+
Sbjct: 72 MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSE-- 129
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D+L+PG V +N + ++ L + D V M++
Sbjct: 130 --------------HYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKL 175
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 176 EKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 235
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA+GTKR+D
Sbjct: 236 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYD 295
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 296 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI IH+ +MT+ DVN EL + DD +GA +KA+C EAG++ALR +V +
Sbjct: 356 DEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 415
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V +KK
Sbjct: 416 EDFKKSKESVLYRKK 430
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 174/375 (46%), Positives = 244/375 (65%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L +EK +E++ K+ + P VGN+ E+++ N + G
Sbjct: 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEY- 134
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y ++ VD D+L+PG + ++ ++ L E D V M+V
Sbjct: 135 ---------------YVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKV 179
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYG PGTGKTL+A
Sbjct: 180 EKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLA 239
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D
Sbjct: 240 KAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD 299
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 300 AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
+ R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H
Sbjct: 360 DIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 419
Query: 397 EDFNEGIIQVQAKKK 411
DF + +V KKK
Sbjct: 420 PDFKKAKEKVMFKKK 434
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 173/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 173/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 173/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 173/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 173/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 173/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 173/374 (46%), Positives = 249/374 (66%)
Query: 38 LKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDL 97
++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 1 MEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE--- 57
Query: 98 DSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVD 157
Y S++ VD D L+PG V +N + ++ L + D V M+V+
Sbjct: 58 -------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVE 104
Query: 158 EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 217
+ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A+
Sbjct: 105 KAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 164
Query: 218 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 277
A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS
Sbjct: 165 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 224
Query: 278 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPS 337
G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 225 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 284
Query: 338 EEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 397
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +E
Sbjct: 285 EKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 344
Query: 398 DFNEGIIQVQAKKK 411
DF + V KK+
Sbjct: 345 DFKKSKENVLYKKQ 358
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 174/375 (46%), Positives = 244/375 (65%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L +EK +E++ K+ + P VGN+ E+++ N + G
Sbjct: 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEY- 134
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y ++ VD D+L+PG + ++ ++ L E D V M+V
Sbjct: 135 ---------------YVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKV 179
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYG PGTGKTL+A
Sbjct: 180 EKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLA 239
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D
Sbjct: 240 KAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD 299
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 300 ANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
+ R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H
Sbjct: 360 DIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 419
Query: 397 EDFNEGIIQVQAKKK 411
DF + +V KKK
Sbjct: 420 VDFKKAKEKVMFKKK 434
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 173/375 (46%), Positives = 250/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MTV DV+ ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 170/365 (46%), Positives = 245/365 (67%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M++
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKL 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV +EL + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNE 401
EDF +
Sbjct: 417 EDFKK 421
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 173/375 (46%), Positives = 249/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++ N + G+
Sbjct: 73 LMEEEFIRDQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE-- 130
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 131 --------------HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MTV DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 177/385 (45%), Positives = 256/385 (66%)
Query: 35 IRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGAN 94
+++LK E + L L+ E+ NQE+IK + Y+ I + L +P G
Sbjct: 69 LKLLKLERIKDYLLLE---EEYITNQEQIKSSDDKNYVKLKIDD-LRGSPVSV----GTL 120
Query: 95 IDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDS 149
+L + G ++ TS Y +++ VD D L+PG V +N + ++ L E D
Sbjct: 121 EELIDENHG---IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDP 177
Query: 150 RVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 209
V M+V++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYGPPG
Sbjct: 178 LVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPG 237
Query: 210 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 269
TGKTL+A+A A +T+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA
Sbjct: 238 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDA 297
Query: 270 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 329
+GTKR+++ G+RE+QRTMLELLNQLDGF S +KVI ATNR D LDPAL+R GR+DR
Sbjct: 298 VGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 330 KIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
KI+LP+P + + RI QIH+ KMT+ PDV+ EE S D+ +GA +KA+C EAG+LALR
Sbjct: 358 KIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRE 417
Query: 390 DATEVNHEDFNEGIIQVQAKKKASL 414
++ D + + +KK ++
Sbjct: 418 RRMKITQADLRKARDKALFQKKGNI 442
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 177/385 (45%), Positives = 256/385 (66%)
Query: 35 IRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGAN 94
+++LK E + L L+ E+ NQE+IK + Y+ I + L +P G
Sbjct: 69 LKLLKLERIKDYLLLE---EEYITNQEQIKSSDDKNYVKLKIDD-LRGSPVSV----GTL 120
Query: 95 IDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDS 149
+L + G ++ TS Y +++ VD D L+PG V +N + ++ L E D
Sbjct: 121 EELIDENHG---IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDP 177
Query: 150 RVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 209
V M+V++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYGPPG
Sbjct: 178 LVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPG 237
Query: 210 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 269
TGKTL+A+A A +T+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA
Sbjct: 238 TGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDA 297
Query: 270 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 329
+GTKR+++ G+RE+QRTMLELLNQLDGF S +KVI ATNR D LDPAL+R GR+DR
Sbjct: 298 VGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 330 KIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
KI+LP+P + + RI QIH+ KMT+ PDV+ EE S D+ +GA +KA+C EAG+LALR
Sbjct: 358 KIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRE 417
Query: 390 DATEVNHEDFNEGIIQVQAKKKASL 414
++ D + + +KK ++
Sbjct: 418 RRMKITQADLRKARDKALFQKKGNI 442
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 166/375 (44%), Positives = 251/375 (66%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
++++E + L +E+ +E + K+ + P VG++ EI++ D+ N+
Sbjct: 76 LMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIID----DQHAIVSTNVG 131
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
+ Y +++ VD ++L+PG V +N ++ ++ L + D V M++
Sbjct: 132 SEH------------YVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKL 179
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y D+GGL++QIQE+ EA+ LP+TH E ++++G+RPPKGV+LYG PGTGKTL+A
Sbjct: 180 EKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLA 239
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG K+VR+ F++A+E +P I+FIDEIDA+GTKR+D
Sbjct: 240 KAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYD 299
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KV+ ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 300 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLP 359
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ +VN EE + D+ +GA +KA+C EAG+LALR V
Sbjct: 360 DEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTM 419
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V +KK
Sbjct: 420 EDFQKSKENVLYRKK 434
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 176/391 (45%), Positives = 251/391 (64%)
Query: 25 IRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQL---PYLVGNIVEILE 81
++ R+ D + + +E LQ +L E KE ++ K+ ++L P VGN+ EI++
Sbjct: 59 LKLERIKDY-LLMEQEFLQNYDLNQPKVDENSKEQADE-KIIEELRGDPLTVGNLEEIID 116
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N + G Y ++ VD KL G V +N + ++
Sbjct: 117 DNHAIVSSTVGPE----------------HYVRIMSFVDKSKLYLGATVLLNNKTLSVVG 160
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
+ E D V M+V++ PTE Y+DIGGLE Q+QE+ EAI LP+TH E ++++G++PPKG
Sbjct: 161 VIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKG 220
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
V+LYG PGTGKTL+A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A E +P I
Sbjct: 221 VILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSI 280
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
+FIDEIDA+GTKR+DS+ G+RE+QRTMLELLNQLDGF + +KVI ATNR + LDPAL
Sbjct: 281 VFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPAL 340
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GR+DRKIE P P + + +I +IH+ KM + DVN EE S DD +GA +KA+C E
Sbjct: 341 IRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTE 400
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKA 412
+G+LALR V H DF + +V +K A
Sbjct: 401 SGLLALRERRMRVTHTDFKKAKEKVLYRKTA 431
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 171/374 (45%), Positives = 246/374 (65%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+L+EE +N E+ EK K+ +EK KQL + GN + I + E+ ++D A +
Sbjct: 70 LLEEEFV-SNSEILKPFEK-KQEEEK----KQLEEIRGNPLSIGTL--EEIIDDDHAIVT 121
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
+ + Y S++ VD + L+PG V ++ + I+ L + D V M++
Sbjct: 122 SPT--------MPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKM 173
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
D+ PTE Y+DIGGLE QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A
Sbjct: 174 DKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 233
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG +L R F++A E +P I+FIDEIDAIGTKR+D
Sbjct: 234 KAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYD 293
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF +KVI ATN+ + LDPAL+R GR+DRKI +P
Sbjct: 294 SNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENP 353
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
+ +IL IH+ KM + DVN E L + DD +GA ++A+C EAG+LALR +V
Sbjct: 354 DLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTA 413
Query: 397 EDFNEGIIQVQAKK 410
EDF + +V K
Sbjct: 414 EDFKQAKERVMKNK 427
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 169/380 (44%), Positives = 242/380 (63%)
Query: 37 VLKEELQRTNLELDSYKE-KVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANI 95
+L+EE TN E E + E +EK+ + P +G + EI++ +D A +
Sbjct: 74 LLEEEFV-TNQEAFQPTEARQAEEREKVDELRGYPMAIGTLEEIID--------DDHAIV 124
Query: 96 DLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAME 155
+ + Y S++ VD L+PG V ++ + ++ L + D V M+
Sbjct: 125 SSTASSE--------YYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDDADPMVSVMK 176
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
+D+ PTE Y DIGGLE QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+
Sbjct: 177 LDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 236
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A QT+ATFL++ G +L+Q ++GDG +L R FQ+A + +P I+FIDEIDAIGTKR+
Sbjct: 237 AKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRY 296
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+S G+RE+QRTMLELLNQLDGF IKVI ATN+ + LDPAL+R GR+DRKI +
Sbjct: 297 ESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFEN 356
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 395
P + +IL IH+ KM++ DVN +E+ DD +GA +KA+C EAG+LALR +V
Sbjct: 357 PDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVK 416
Query: 396 HEDFNEGIIQVQAKKKASLN 415
EDF +V K K N
Sbjct: 417 AEDFKSAKERV-LKNKVEEN 435
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 170/368 (46%), Positives = 238/368 (64%)
Query: 35 IRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGAN 94
+R+LK +QR + L +E V +NQE++K + N V+ + P +
Sbjct: 67 LRLLK--MQRIHDHLLMEEEYV-QNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEI- 122
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAM 154
+D Y S++ VD D L+PG V ++ + I+ L + D + M
Sbjct: 123 --IDDDHAIVSTAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVM 180
Query: 155 EVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTL 214
++D+ PTE Y DIGGLE QIQE+ EA+ LP+TH E ++++G++PPKGV+LYG PGTGKTL
Sbjct: 181 KLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTL 240
Query: 215 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 274
+A+A A QT+ATFL++ G +L+Q ++GDG +LVR F A+E SP I+FIDEIDAIGTKR
Sbjct: 241 LAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKR 300
Query: 275 FDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIEL 333
+D++ +RE+QRTMLELLNQLDGF + R IKVI ATNR LDPAL+R GR+DRKI
Sbjct: 301 YDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILF 360
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 393
+P E + +I IH+ KM + DVN EEL + DD +GA++KA+ EAG+LALR
Sbjct: 361 ENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMR 420
Query: 394 VNHEDFNE 401
V +DF +
Sbjct: 421 VVMDDFRQ 428
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 165/405 (40%), Positives = 247/405 (60%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
++ + D+ + L E+ +++ + E + K++ QE++K K +P ++
Sbjct: 17 EKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVI 76
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVN 133
G +E ++ N A G+N Y V+ +D ++LKP VG++
Sbjct: 77 GQFLEAVDENNGIVASTTGSNY----------------YVRVLSTIDREQLKPSSSVGLH 120
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQK 193
K S ++D +P E DS + + DEKP Y+DIGGL+ Q QE+ EA+ LP+TH + +++
Sbjct: 121 KQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQ 180
Query: 194 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 253
+G+ PP+GVLL+GPPG GKT++A+A A T A+F+++ G + VQ ++G+G ++VRD F+L
Sbjct: 181 IGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRL 240
Query: 254 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 313
AK+ SP IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF IKVI ATNR
Sbjct: 241 AKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNR 300
Query: 314 ADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGA 373
AD LDPAL+R GRLDRKIELP P + + + KM V DV+ E++ D + A
Sbjct: 301 ADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNA 360
Query: 374 QLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
+ A+C EAGM A+R + VN +DF +G K +A +Y+
Sbjct: 361 DINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQHEFYS 405
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 159/395 (40%), Positives = 246/395 (62%)
Query: 23 DIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEM 82
D+ + + L++++ + + E + K ++ QE++K + +P L+G ++E+++
Sbjct: 24 DLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDS 83
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDT 142
N G+ + CV ++ +D + LKP V + + S ++DT
Sbjct: 84 NTGIVQSTSGSTL---------CV-------RILSTIDRELLKPSASVALQRHSNALVDT 127
Query: 143 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGV 202
LP E DS + + DEKP+E Y+DIGG + Q QE+ EA+ LP+TH ++++G+ PP+GV
Sbjct: 128 LPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGV 187
Query: 203 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 262
LLYGPPGTGKT++A+A A T+A F+++ G + VQ ++G+G +LVRD F+LA+E SP II
Sbjct: 188 LLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAII 247
Query: 263 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 322
FIDEIDAI TKRFD++ DREVQR ++ELLNQ+DGF +KVI ATNR D LDPAL+
Sbjct: 248 FIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALL 307
Query: 323 RSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 382
R GRLDRKIE P P + I Q+ + KM + +V+ E+ D +GA+++++C EA
Sbjct: 308 RPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEA 367
Query: 383 GMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
GM A+R++ + +DF +G K N+Y
Sbjct: 368 GMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNFY 402
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 167/380 (43%), Positives = 246/380 (64%)
Query: 31 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEE 90
L ++R L R + + +V+ +E+++L ++ VG +V+++ N
Sbjct: 43 LQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN------- 95
Query: 91 DGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 150
+ + +GK VV + +D K+ P V + DSY++ LPS+ D
Sbjct: 96 ---KVLVKVHPEGKYVV------DIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPL 146
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGT
Sbjct: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+I
Sbjct: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
Query: 271 GTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 329
G+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DR
Sbjct: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
Query: 330 KIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
KIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC EAGM ALR
Sbjct: 327 KIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
Query: 390 DATEVNHEDFNEGIIQVQAK 409
V EDF + +V K
Sbjct: 387 RRVHVTQEDFEMAVAKVMKK 406
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 167/402 (41%), Positives = 253/402 (62%)
Query: 23 DIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNI--VEIL 80
DI SR ++R L+ +QR + L +E+ EN E+++ K N V+I
Sbjct: 55 DIFPTSRC---KLRYLR--MQRVHDHL-LLEEEYVENMERLRKAKASASDSANRGDVDIT 108
Query: 81 EMNPEDEAEED---GANIDLDSQRK----GKCVVLKTS----YPSVVGLVDPDKLKPGDL 129
+ N ++ + D G+ + + + + +V + Y S++ VD D L+PG
Sbjct: 109 DRNADERSRVDDMRGSPMGVGNLEELIDDDHAIVSSATGPEYYVSIMSFVDKDLLEPGAS 168
Query: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
+ ++ + ++ L E D V M++D+ PTE Y DIGGLE QIQE+ E++ LP+ H E
Sbjct: 169 ILLHHKTVSVVGVLTEESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPE 228
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
++++G++PPKGV+LYG PGTGKTL+A+A A QT+ATFL++ G +L+Q ++GDG +LVR
Sbjct: 229 LYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQ 288
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
FQ+A E +P I+FIDEIDAIGTKR+DS G+RE+QRTMLELLNQLDGF +KVI
Sbjct: 289 IFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIM 348
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATN+ + LDPAL+R GR+DRKI +P + + +I +H+ KM++ DV+ +E DD
Sbjct: 349 ATNKIETLDPALIRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDD 408
Query: 370 FNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 411
+GA ++A+C EAG++ALR V +DF ++ K+
Sbjct: 409 LSGADIRAICTEAGLMALRERRMRVQMDDFRAARERIMKTKQ 450
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 170/383 (44%), Positives = 249/383 (65%)
Query: 31 LDNEIRVLKEE---LQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDE 87
LD R+ +E+ L R + + +V+ +E+++L ++ VG +V+++ N
Sbjct: 40 LDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN---- 95
Query: 88 AEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEY 147
+ + +GK VV + +D KL P V + DSY++ LPS+
Sbjct: 96 ------KVLVKVHPEGKYVV------DIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKV 143
Query: 148 DSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGP 207
D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGP
Sbjct: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
Query: 208 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 267
PGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEI
Sbjct: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
Query: 268 DAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 326
D+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR
Sbjct: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
Query: 327 LDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 386
+DRKIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC EAGM A
Sbjct: 324 IDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
Query: 387 LRRDATEVNHEDFNEGIIQVQAK 409
LR V EDF + +V K
Sbjct: 384 LRERRVHVTQEDFEMAVAKVMKK 406
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 171/395 (43%), Positives = 250/395 (63%)
Query: 20 TTDDIIR--ASRLLDNEIRVLK--EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGN 75
+ ++I++ ++ D E+ +L+ + L+R + + +V+ +E+I+L ++ VG
Sbjct: 12 SNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGE 71
Query: 76 IVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKD 135
+++ + N + + +GK VV + +D ++KP V + D
Sbjct: 72 VIKTMGKN----------KVLVKVHPEGKYVV------DISPDIDIKEIKPNIRVALRND 115
Query: 136 SYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLG 195
SY ++ LP++ D V M V++ P Y +GGLEKQI+E+ E I LP+ H E F+ LG
Sbjct: 116 SYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLG 175
Query: 196 VRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAK 255
+ PKG+LLYGPPGTGKTL+ARA A T+ F++++G +LVQ +IG+G+++VR+ F +A+
Sbjct: 176 IPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAR 235
Query: 256 EKSPCIIFIDEIDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRA 314
E +P IIF+DEID+IG+ R DS SGD EVQRTMLELLNQLDGF + IKVI ATNR
Sbjct: 236 EHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 295
Query: 315 DILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQ 374
DILDPAL+R GR+DRKIE P PS EARA IL+IHSR M + ++ + +A + +GA+
Sbjct: 296 DILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAE 355
Query: 375 LKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 409
LK VC EAGM ALR V EDF + +V K
Sbjct: 356 LKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNK 390
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 171/369 (46%), Positives = 233/369 (63%)
Query: 48 ELDSYKEKVKENQEKIK-LNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCV 106
++D ++KV + + ++ L Q L V +L+ + + E G+ + S+ K
Sbjct: 37 KVDDAQQKVADKSQNVRRLQAQRNEL-NTKVRMLKEELQ-QLHEQGSYVGEVSKAMDKKK 94
Query: 107 VLKTSYPSVVGLVDPDK------LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
VL +P +VD DK L G V + DSY + LP++ D V M V++ P
Sbjct: 95 VLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVP 154
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y +GGL+KQI+E+ E I LP+ H E F LG+ PKGVLL+GPPGTGKTL+ARA A
Sbjct: 155 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA 214
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
T TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 215 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSG 274
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
GD EVQRTMLELLNQLDGF + IKVI ATNR DILDPAL+R GR+DRKIE P P E+A
Sbjct: 275 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKA 334
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
RA IL+IHSRKM + +N ++A +GA++K+VC EAGM ALR V EDF
Sbjct: 335 RADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 394
Query: 401 EGIIQVQAK 409
+ +V K
Sbjct: 395 MAVGKVMQK 403
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 170/378 (44%), Positives = 242/378 (64%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
+ Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 129 SVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQA 308
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IHS +T H D+++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 309 RLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFM 368
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 369 KAVRKVADSKKLESKLDY 386
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 174/404 (43%), Positives = 242/404 (59%)
Query: 6 VEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKL 65
+E +IED + S + L + + L+R + + KV+ +E+++L
Sbjct: 6 IEQMDIEDSKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQL 65
Query: 66 NKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLK 125
++ VG +V + D + + +GK VV V +D + +
Sbjct: 66 LQEQGSYVGEVVRAM----------DKKKVLVKVHPEGKFVV------DVDKNIDINDVT 109
Query: 126 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPM 185
P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I LP+
Sbjct: 110 PNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPV 169
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ FIG+GA+
Sbjct: 170 KHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGAR 229
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF + I
Sbjct: 230 MVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 289
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
KVI ATNR DILD AL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 349
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 409
+GA++K VC EAGM ALR V EDF + +V K
Sbjct: 350 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 166/403 (41%), Positives = 244/403 (60%)
Query: 12 EDDQLSSMTTDDIIRASRLLDNE-IRVLKEELQRTNLELDSYKEKVKENQ---------- 60
E D+LS + D + LD E + V ++LQ+T ++ +E +K+ Q
Sbjct: 11 EKDELSDLKLKDAHSSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHA 70
Query: 61 -EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLV 119
E++K + +P ++G +E ++ N G+N Y ++ +
Sbjct: 71 QEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNY----------------YVRILSTI 114
Query: 120 DPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIE 179
D + LKP V ++K S ++D LP E DS + ++ DEKP Y DIGG++ Q QE+ E
Sbjct: 115 DRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIRE 174
Query: 180 AIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMF 239
A+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+A A T A+F+++ G + VQ +
Sbjct: 175 AVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKY 234
Query: 240 IGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF 299
+G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF
Sbjct: 235 LGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF 294
Query: 300 SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN 359
+KVI ATNRAD LDPAL+R GRLDRKIE P P + + + KM + DV+
Sbjct: 295 DQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVD 354
Query: 360 FEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG 402
EE D +GA + A+C EAGM A+R + V +DF +G
Sbjct: 355 LEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKG 397
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 152/295 (51%), Positives = 205/295 (69%)
Query: 115 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG +
Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
+QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++
Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE
Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+E P E+R +I +IH+R
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 406
M D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V
Sbjct: 355 MNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 168/370 (45%), Positives = 232/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V ++ D + +
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRVM----------DKKKVLVKV 89
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 90 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 384 EMAVAKVMQK 393
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 171/384 (44%), Positives = 241/384 (62%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEE--LQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNI 76
M D+ R +++ ++ +++ + L+R + + Y +V+ +E++ L +Q VG +
Sbjct: 1 MALDNYYR-NKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEV 59
Query: 77 VEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDS 136
V+++ + + +GK VV + VD KL G V + DS
Sbjct: 60 VKVMSTK----------KVLVKVHPEGKYVV------DIADGVDIGKLTVGKRVALLSDS 103
Query: 137 YLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGV 196
Y + LPS D V M V++ P Y+ IGGL++QI+E+ E I L + H E F+ LG+
Sbjct: 104 YKLEKMLPSSVDPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGI 163
Query: 197 RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKE 256
PKGVLLYGPPGTGKTL+ARA A T+ F++++G +LVQ +IG+G+++VR+ F +A+E
Sbjct: 164 AQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMARE 223
Query: 257 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADI 316
+P IIF+DEID+IG+ R DS SGD EVQRTMLELLNQLDGF IK+I ATNR DI
Sbjct: 224 HAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDI 283
Query: 317 LDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLK 376
LDPAL+R GR+DRKIE P PS EARA IL+IHSR M + +N ++A + +GA+LK
Sbjct: 284 LDPALLRPGRIDRKIEFPPPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELK 343
Query: 377 AVCVEAGMLALRRDATEVNHEDFN 400
VC EAGM ALR V EDF+
Sbjct: 344 GVCTEAGMYALRERRVHVTQEDFD 367
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 170/388 (43%), Positives = 237/388 (61%)
Query: 35 IRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGAN 94
IR+L+E++++ +++ +KE+ I Q +V E P +
Sbjct: 40 IRILEEDIKKMTSKVNELCG-IKESDTGIGPPSQWDLVVDKTSAHEE--PPLQVARCTKI 96
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
ID+ + +K VV L D P ++ G VGV+++ Y I LP + D+ V
Sbjct: 97 IDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASV 156
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y D+GG ++QI++L E + +P+ H E+F LG+ PPKGVL+YGPPGTG
Sbjct: 157 TMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTG 216
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VRD FQ+A+ K CIIF DE+DAIG
Sbjct: 217 KTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIG 276
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPAL+R GRLDRK+
Sbjct: 277 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKV 336
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E RA I IH++ M+ D+ FE LAR + GA +++VC EAGM A+R
Sbjct: 337 EFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARR 396
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
V+ +DF E I I+ AK A+ Y
Sbjct: 397 KVVSEKDFLEAIDKVIKSYAKFSATSRY 424
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 369 KAVRKVADSKKLESKLDY 386
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 15 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 74
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 75 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 134
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 135 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 194
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 195 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 255 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 315 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 374
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 375 KAVRKVADSKKLESKLDY 392
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 369 KAVRKVADSKKLESKLDY 386
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 23 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 82
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 83 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 142
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 383 KAVRKVADSKKLESKLDY 400
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 369 KAVRKVADSKKLESKLDY 386
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 369 KAVRKVADSKKLESKLDY 386
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 1 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 60
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 61 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 120
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 240
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 241 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 301 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 360
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 361 KAVRKVADSKKLESKLDY 378
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 23 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 82
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 83 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 142
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 383 KAVRKVADSKKLESKLDY 400
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 164/383 (42%), Positives = 241/383 (62%)
Query: 29 RLLDNEIRVLK--EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED 86
++ D EIR+ + + L+R + + KV++ ++++KL ++ VG +V+++ +
Sbjct: 22 QIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELKLLQEPGSYVGEVVKVMGLK--- 78
Query: 87 EAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 146
+ + +GK +V +V +D KL P V + DS+ + LP++
Sbjct: 79 -------KVLVKIHPEGKFIV------NVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTK 125
Query: 147 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYG 206
D V M V++ P Y+ +GGL+KQI+E+ E I LP+ H E F+ LG+ PKGV+LYG
Sbjct: 126 VDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYG 185
Query: 207 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 266
PPGTGKTL+ARA A T F++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DE
Sbjct: 186 PPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 245
Query: 267 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 326
ID+IG+ R + GD EVQRTMLELLNQLDGF S IK+I ATNR DILDPAL+R GR
Sbjct: 246 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGR 305
Query: 327 LDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 386
+DRKIE P P+ AR IL+IHSR M + +N ++A + +GA +K VC EAGM A
Sbjct: 306 IDRKIEFPAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYA 365
Query: 387 LRRDATEVNHEDFNEGIIQVQAK 409
LR V EDF + +V +K
Sbjct: 366 LRERRIHVTQEDFELAVAKVMSK 388
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 167/370 (45%), Positives = 234/370 (63%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V+ P D+ + + +
Sbjct: 39 QNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVK-----PMDKKK-----VLVKV 88
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV + +D + + P V + +SY + LP++ D V M V++
Sbjct: 89 HPEGKFVV------DLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 142
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y +GGL+KQI+E+ E I LP+ H E F LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 143 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAV 202
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T TF++++G +LVQ FIG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S
Sbjct: 203 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 262
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILDPAL+R GR+DRKIE P P+EE
Sbjct: 263 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEE 322
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 323 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 382
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 383 EMAVAKVMQK 392
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 23 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 82
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 83 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 142
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 143 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 383 KAVRKVADSKKLESKLDY 400
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 168/378 (44%), Positives = 241/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 129 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 369 KAVRKVADSKKLESKLDY 386
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 161/328 (49%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 ITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R IL+IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 46 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 95
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 96 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 149
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 150 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 209
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 210 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 269
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 270 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 329
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 330 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 389
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 390 EMAVAKVMQK 399
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 89
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 90 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 384 EMAVAKVMQK 393
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 89
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 90 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 384 EMAVAKVMQK 393
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 89
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 90 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 384 EMAVAKVMQK 393
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KVATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 48 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 97
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 98 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 151
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 152 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 211
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 212 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 271
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 272 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 331
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 332 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 391
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 392 EMAVAKVMQK 401
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 89
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 90 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 384 EMAVAKVMQK 393
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 89
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 90 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 384 EMAVAKVMQK 393
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/387 (41%), Positives = 234/387 (60%)
Query: 31 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEE 90
L+ ++ L+ LE + ++++ QE++K + +P ++G +E ++ N
Sbjct: 43 LERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGST 102
Query: 91 DGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 150
G+N Y V+ ++D + LKPG V ++K S ++D LP E DS
Sbjct: 103 TGSNY----------------YVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSS 146
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
++ + DEKP Y DIGGL+ Q QE+ EA+ LP+TH E +Q++G+ PP+GVL+YGPPG
Sbjct: 147 IQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGC 206
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKT++A+A AA T A+F+++ G + VQ ++G+G ++VRD F+LAKE SP IIFIDEIDAI
Sbjct: 207 GKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAI 266
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNR D LDPAL+R GRLDRK
Sbjct: 267 ATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRK 326
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
IE P P + + +M + DV+ E+ D +GA + ++C EAGM A+R +
Sbjct: 327 IEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVREN 386
Query: 391 ATEVNHEDFNEGIIQVQAKKKASLNYY 417
V +D + V K +Y
Sbjct: 387 RYVVLTKDLEKAYKNVVKKDTNDFEFY 413
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 93 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 152
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 153 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 212
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 213 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 272
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 273 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 332
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 333 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 392
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 393 KIATEKDFLEAVNKVIKSYAKFSATPRY 420
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 101 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 160
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 161 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 220
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 221 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 280
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 281 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 340
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 341 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 400
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 401 KIATEKDFLEAVNKVIKSYAKFSATPRY 428
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 144 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 203
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 204 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 263
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 264 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 323
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 324 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 383
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 384 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 443
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 444 KIATEKDFLEAVNKVIKSYAKFSATPRY 471
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 103 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 162
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 163 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 222
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 223 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 282
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 283 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 342
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 343 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 402
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 403 KIATEKDFLEAVNKVIKSYAKFSATPRY 430
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 167/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 48 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 97
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV + +D + + P V + DSY + LP++ D V M V++
Sbjct: 98 HPEGKFVV------DIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 151
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 152 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 211
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 212 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 271
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 272 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 331
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 332 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 391
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 392 EMAVAKVMQK 401
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 160/328 (48%), Positives = 214/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 168/378 (44%), Positives = 240/378 (63%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANID---LDSQRKGK 104
L Y++K+ E++E K+L + + + E + D +A + I L + K
Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68
Query: 105 CVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
+V T+ P VVG +D KLKPG V ++ + I+ LP E D V M ++
Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y++IGGL +QI+EL E I LP+T+ E FQ++G+ PPKG LLYGPPGTGKTL+ARA A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+Q + FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+A
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL+IH+ +T H ++++E + + +D FNGA L VC EAGM A+R D V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK + L+Y
Sbjct: 369 KAVRKVADSKKLESKLDY 386
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 168/369 (45%), Positives = 229/369 (62%)
Query: 48 ELDSYKEKVKENQEKIK-LNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCV 106
+++ ++ V E ++ L Q L G V +L+ E G+++ + K
Sbjct: 53 KVEQAEQTVAEKSINVRRLMAQQKELNGK-VRLLK-EEISHLHEQGSHVGEVCKAMDKKK 110
Query: 107 VLKTSYPS------VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
VL ++P V VD L G V + D+Y I + LPS+ D V M V++ P
Sbjct: 111 VLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVP 170
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
Y +GGL+ QI+E+ E I LP+ H E F LG+ PKGVLLYGPPGTGKTL+ARA A
Sbjct: 171 DSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
T TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 231 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRG 290
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P E+A
Sbjct: 291 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKA 350
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
RA+IL+IHSRKM + + +++A +GA++K+VC EAGM ALR V EDF
Sbjct: 351 RAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 410
Query: 401 EGIIQVQAK 409
+ +V K
Sbjct: 411 MAVGKVMQK 419
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 160/328 (48%), Positives = 213/328 (64%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+ + G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 160/328 (48%), Positives = 213/328 (64%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS+ + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V+EKP Y+D+GG ++QI++L E + P+ H ERF LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+ + G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRKI
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKI 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+R M+V D+ FE LAR + GA++++VC EAGM A+R
Sbjct: 342 EFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KIATEKDFLEAVNKVIKSYAKFSATPRY 429
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 154/402 (38%), Positives = 240/402 (59%)
Query: 16 LSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGN 75
LS+ +D+ + L+ ++ + + E + K ++ QE++K + +P ++G
Sbjct: 22 LSTADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQ 81
Query: 76 IVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKD 135
+E+++ N G+N Y ++ ++ + LKP V +++
Sbjct: 82 FMEMVDQNNGIVGSTTGSNY----------------YVRILSTINRELLKPSASVALHRH 125
Query: 136 SYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLG 195
S ++D LP E DS + + EKP YNDIGG + Q QE+ EA+ LP+TH E ++++G
Sbjct: 126 SNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIG 185
Query: 196 VRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAK 255
+ PP+GVLLYGPPGTGKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAK
Sbjct: 186 IDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 245
Query: 256 EKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRAD 315
E +P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +KVI ATNRAD
Sbjct: 246 ENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRAD 305
Query: 316 ILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQL 375
LDPAL+R GRLDRKIE P P + + Q+ + KM + +V+ E+ D + A++
Sbjct: 306 TLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEI 365
Query: 376 KAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
A+C EAGM A+R++ + +DF +G K +Y
Sbjct: 366 AAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFY 407
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 751 (269.4 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 155/340 (45%), Positives = 215/340 (63%)
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGL---VDPDKLKPGDLVGVNKDSYLI 139
N + + + D D + + LK VVGL V P ++ G VGV++ Y I
Sbjct: 124 NSNSNSNQQSTDADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNI 183
Query: 140 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPP 199
LP D V M V+EKP Y+D+GG + QI++L E + LP+ ERF LG+ PP
Sbjct: 184 ELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPP 243
Query: 200 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 259
KG+LLYGPPGTGKTL ARA A +T+ATF+++ G +LVQ ++G+GA++VR+ F++A+ K
Sbjct: 244 KGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 303
Query: 260 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 319
CIIF DEIDA+G RFD GD EVQRTMLEL+ QLDGF IKV+ ATNR + LDP
Sbjct: 304 CIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDP 363
Query: 320 ALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVC 379
AL+R GR+DRK+E P E RA I +IHS+ M+V + +E ++R + GA+L++VC
Sbjct: 364 ALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVC 423
Query: 380 VEAGMLALRRDATEVNHEDFNEGIIQVQA--KKKASLNYY 417
EAGM A+R +DF + + +V + KK +S + Y
Sbjct: 424 TEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSSTSRY 463
Score = 37 (18.1 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKE 58
+D +DD++ +T DI L +L++T +L + ++KE
Sbjct: 17 DDKKPDDDKIVPLTEGDI---QVLKSYGAAPYAAKLKQTENDLKDIEARIKE 65
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 155/328 (47%), Positives = 215/328 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ DS + +K VV L D P ++ G VGV+++ Y I LP + D V
Sbjct: 102 INADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTV 161
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M+V++KP Y+D+GG ++QI++L E + P+ H E+F LG+ PPKGVLL+GPPGTG
Sbjct: 162 TMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTG 221
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDAIG
Sbjct: 222 KTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIG 281
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
RFD GD EVQRTMLEL+NQLDGF IKV+ ATNR D LDPALMR GRLDRK+
Sbjct: 282 GARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 341
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P ++ R+ I +IH+R M+V D+ F+ LAR + GA++++VC EAGM A+R
Sbjct: 342 EFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARR 401
Query: 392 TEVNHEDFNEGI---IQVQAKKKASLNY 416
+DF E + I+ AK A+ Y
Sbjct: 402 KVATEKDFLEAVKKVIKSYAKFSATPRY 429
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 37 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 96
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 97 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 140
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 141 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 200
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 201 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 260
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 261 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 320
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E
Sbjct: 321 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 380
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
+GMLA+R + V +DF + V K + +Y
Sbjct: 381 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 416
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 98 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 141
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E
Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
+GMLA+R + V +DF + V K + +Y
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 98 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 141
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E
Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
+GMLA+R + V +DF + V K + +Y
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 98 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 141
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E
Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
+GMLA+R + V +DF + V K + +Y
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 168/370 (45%), Positives = 231/370 (62%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS 99
+ L+R + + KV+ +E+++L ++ VG +V + D + +
Sbjct: 35 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAM----------DKKKVLVKV 84
Query: 100 QRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+GK VV V +D + + P V + DSY + LP++ D V M V++
Sbjct: 85 HPEGKFVV------DVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 138
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA
Sbjct: 139 PDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAV 198
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +
Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGS 257
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EE
Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
AR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF
Sbjct: 318 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377
Query: 400 NEGIIQVQAK 409
+ +V K
Sbjct: 378 EMAVAKVMQK 387
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 98 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 141
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E
Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
+GMLA+R + V +DF + V K + +Y
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 98 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 141
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E
Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
+GMLA+R + V +DF + V K + +Y
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 157/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 98 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 141
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E
Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
+GMLA+R + V +DF + V K + +Y
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 174/414 (42%), Positives = 254/414 (61%)
Query: 9 SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKV-KENQEKIKLNK 67
+ I + + + +D + S L NE +V + L+++ Y+ + K+ Q K +L
Sbjct: 19 NEISEKNMENNNNNDNNKNSSAL-NEEQVQSGIKRYYELKIEEYESIINKKLQNKKRLEA 77
Query: 68 QLPYLVGNIVEIL-EMNPEDEAEEDGANIDLDSQRKGKCVV-LKTSYPSVVGL---VDPD 122
Q L + E+ E+ EA I + K K +V + VV + ++
Sbjct: 78 QRNELNARVRELCDEIQYLLEAASYVGEI-VKPMGKNKVLVKINPEGKYVVDIARHINIS 136
Query: 123 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIV 182
P V + DSY + LPS+ D V M+V++ P Y +GGL++Q++E+ E I
Sbjct: 137 HCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIE 196
Query: 183 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 242
LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+
Sbjct: 197 LPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 256
Query: 243 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 302
G+++VR+ F +A+E +P IIF+DEID+IG++R + E GD EVQRTM+ELLNQLDGF S
Sbjct: 257 GSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE-HGDSEVQRTMMELLNQLDGFEST 315
Query: 303 DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEE 362
IKVI TNR DILD AL+R GR+DRKIE P+P+ EAR IL+IHSRKM + ++ +
Sbjct: 316 QNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLK 375
Query: 363 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNY 416
+A ++ +GA++KAVC EAGM ALR V EDF + +V K+ A N+
Sbjct: 376 IATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVM-KQDAEKNF 428
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 174/414 (42%), Positives = 254/414 (61%)
Query: 9 SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKV-KENQEKIKLNK 67
+ I + + + +D + S L NE +V + L+++ Y+ + K+ Q K +L
Sbjct: 19 NEISEKNMENNNNNDNNKNSSAL-NEEQVQSGIKRYYELKIEEYESIINKKLQNKKRLEA 77
Query: 68 QLPYLVGNIVEIL-EMNPEDEAEEDGANIDLDSQRKGKCVV-LKTSYPSVVGL---VDPD 122
Q L + E+ E+ EA I + K K +V + VV + ++
Sbjct: 78 QRNELNARVRELCDEIQYLLEAASYVGEI-VKPMGKNKVLVKINPEGKYVVDIARHINIS 136
Query: 123 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIV 182
P V + DSY + LPS+ D V M+V++ P Y +GGL++Q++E+ E I
Sbjct: 137 HCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIE 196
Query: 183 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 242
LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+
Sbjct: 197 LPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 256
Query: 243 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 302
G+++VR+ F +A+E +P IIF+DEID+IG++R + E GD EVQRTM+ELLNQLDGF S
Sbjct: 257 GSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE-HGDSEVQRTMMELLNQLDGFEST 315
Query: 303 DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEE 362
IKVI TNR DILD AL+R GR+DRKIE P+P+ EAR IL+IHSRKM + ++ +
Sbjct: 316 QNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLK 375
Query: 363 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNY 416
+A ++ +GA++KAVC EAGM ALR V EDF + +V K+ A N+
Sbjct: 376 IATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVM-KQDAEKNF 428
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 156/399 (39%), Positives = 239/399 (59%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
+T +D + L +I +L + E + K ++ ++ +IK + +P ++G ++
Sbjct: 8 LTEEDYYIRLKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLD 67
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYL 138
I++ N + G+N Y ++ ++ + LKP V +++ S+
Sbjct: 68 IIDNNYGIVSSTAGSNY----------------YVRILSTLNKEDLKPSVSVALHRHSHS 111
Query: 139 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
I++ LPSE DS ++ +++ E+P Y D+GGL+ Q QE+ EA+ LP+T E ++K+G+ P
Sbjct: 112 IVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEP 171
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
P G+L+YGPPGTGKT++ +A A +T TF+ + G + VQ ++G+G ++VRD F+LA+E S
Sbjct: 172 PMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENS 231
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
P IIFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNRAD LD
Sbjct: 232 PSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLD 291
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
PAL+R GRLDRKIE P P + + I Q KM V DVN E TD + A + A+
Sbjct: 292 PALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAI 351
Query: 379 CVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
EAGM A+R++ + DF +G K+ +Y
Sbjct: 352 AQEAGMQAIRKNRYIITANDFEQGYRTHVRKQLRDYEFY 390
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 156/399 (39%), Positives = 239/399 (59%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
+T +D + L +I +L + E + K ++ ++ +IK + +P ++G ++
Sbjct: 8 LTEEDYYIRLKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLD 67
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYL 138
I++ N + G+N Y ++ ++ + LKP V +++ S+
Sbjct: 68 IIDNNYGIVSSTAGSNY----------------YVRILSTLNKEDLKPSVSVALHRHSHS 111
Query: 139 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
I++ LPSE DS ++ +++ E+P Y D+GGL+ Q QE+ EA+ LP+T E ++K+G+ P
Sbjct: 112 IVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEP 171
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
P G+L+YGPPGTGKT++ +A A +T TF+ + G + VQ ++G+G ++VRD F+LA+E S
Sbjct: 172 PMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENS 231
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
P IIFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNRAD LD
Sbjct: 232 PSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLD 291
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
PAL+R GRLDRKIE P P + + I Q KM V DVN E TD + A + A+
Sbjct: 292 PALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAI 351
Query: 379 CVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
EAGM A+R++ + DF +G K+ +Y
Sbjct: 352 AQEAGMQAIRKNRYIITANDFEQGYRTHVRKQLRDYEFY 390
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 170/409 (41%), Positives = 250/409 (61%)
Query: 3 TAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEK 62
TA V SNI + S + + + +IR E ++R + ++ +KV+ +++
Sbjct: 2 TAAVTSSNIVLETHESGIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDE 61
Query: 63 IKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPD 122
++L ++ VG +++I+ D+ + + Q +GK +V V ++
Sbjct: 62 LRLLQEPGSYVGEVIKIVS----DK------KVLVKVQPEGKYIV------DVAKDINVK 105
Query: 123 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIV 182
LK V + DSY++ L ++ D V M V++ P Y+ +GGL KQI+E+ E I
Sbjct: 106 DLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIE 165
Query: 183 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 242
LP+ H E F+ LG+ PKGV+LYGPPGTGKTL+ARA A T+ F++++G +LVQ +IG+
Sbjct: 166 LPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGE 225
Query: 243 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 302
G+++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF +
Sbjct: 226 GSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETS 285
Query: 303 DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEE 362
IK+I ATNR DILDPAL+R GR+DRKIE P PS ARA IL+IHSRKM + +N +
Sbjct: 286 KNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRK 345
Query: 363 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 411
+A + +GA +K VC EAGM ALR V EDF + +V K +
Sbjct: 346 VAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQ 394
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 168/391 (42%), Positives = 247/391 (63%)
Query: 28 SRLLDNEIRVLK--EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPE 85
S++ + EI+V + ++L+R + + +V+ +E+++L V +V+++ N
Sbjct: 22 SKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKN-- 79
Query: 86 DEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPS 145
+ + +GK VV + VD KL P + +SY + LP+
Sbjct: 80 --------KVLVKVNPEGKFVV------DIDPTVDIAKLTPSTRAALKHESYTLHRILPN 125
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
+ D V M+V++ P Y+ +GGL+KQI+E+ E I LP+ H E F+ LG+ PKGVLLY
Sbjct: 126 KIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLY 185
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+D
Sbjct: 186 GPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMD 245
Query: 266 EIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 324
EID+IG+ R +S GD EVQRTMLELLNQLDGF S IKV+ TNR DILDPAL+R
Sbjct: 246 EIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRP 305
Query: 325 GRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGM 384
GR+DRKIE P+P + R IL+IHSRKM + +N ++++ + +GA+LKAVC EAGM
Sbjct: 306 GRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGM 365
Query: 385 LALRRDATEVNHEDFNEGIIQVQAKKKASLN 415
ALR V+ EDF + +V KK + N
Sbjct: 366 YALRERRVHVSQEDFEMAVSKVM-KKDSEQN 395
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 156/396 (39%), Positives = 238/396 (60%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++
Sbjct: 38 EDLYSIYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD 141
N G+N Y ++ +D + LKP V ++K S ++D
Sbjct: 98 QNTAIVGSTTGSNY----------------YVRILSTIDRELLKPNASVALHKHSNALVD 141
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LP E DS + + D+KP Y+DIGG++ Q QE+ EA+ LP+TH E ++++G+ PP+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL+YGPPG GKT++A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P I
Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL
Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+ GRLDRKIE P P + + + KM + +V+ E+ D +GA + ++C E
Sbjct: 322 LCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
AGMLA+R + V +DF + V K + +Y
Sbjct: 382 AGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 173/301 (57%), Positives = 213/301 (70%)
Query: 36 RVLKEELQRTNLELDSYKEKVKENQEKIKLNKQL----PYLVGNIVEILEMNPED--EAE 89
R+L E++ E+ +++ ++KIK N + L + ++E+ D + E
Sbjct: 11 RLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQE 70
Query: 90 EDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVG-VNKDSYLILDTLPSEYD 148
EDGANIDLDSQRKGKC V+KTS L P ++G V+ + D + D
Sbjct: 71 EDGANIDLDSQRKGKCAVIKTSTRQTYFL-------P--VIGLVDAEKLKPGDLVGVNKD 121
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S + ++ PTE Y+ + EL+EAIVLPM HKE+F+ LG++PPKGVL+YGPP
Sbjct: 122 SY---LILETLPTE-YDS----RVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 173
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+D
Sbjct: 174 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 233
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
AIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVIAATNR DILDPAL+RSGRLD
Sbjct: 234 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 293
Query: 329 R 329
R
Sbjct: 294 R 294
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 94/145 (64%), Positives = 122/145 (84%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVN 133
+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDE 158
KDSYLIL+TLP+EYDSRVKAME+ E
Sbjct: 120 KDSYLILETLPTEYDSRVKAMELVE 144
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 161/327 (49%), Positives = 214/327 (65%)
Query: 89 EEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDK---LK---PGDLVGVNKDSYLILDT 142
+E G+ I + K VL +P +VD DK +K P V + +SY +
Sbjct: 61 QEQGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKI 120
Query: 143 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGV 202
LP++ D V M V++ P Y +GGL+KQIQE+ E I LP+ H E F LG+ PKGV
Sbjct: 121 LPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGV 180
Query: 203 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 262
LLYGPPGTGKTL+ARA A T TF++++G +LVQ FIG+G+++VR+ F +A+E +P II
Sbjct: 181 LLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSII 240
Query: 263 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 322
F+DEID+IG+ R ++ +GD EVQRTMLELLNQLDGF + IKVI ATNR D+LD AL+
Sbjct: 241 FMDEIDSIGSARLETG-TGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALL 299
Query: 323 RSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 382
R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EA
Sbjct: 300 RPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEA 359
Query: 383 GMLALRRDATEVNHEDFNEGIIQVQAK 409
GM ALR V EDF + +V K
Sbjct: 360 GMYALRERRVHVTQEDFEMAVSKVMMK 386
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 153/308 (49%), Positives = 208/308 (67%)
Query: 115 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
VV L D P ++ G VGV+++ Y I LP++ D V M+V+EKP Y+D+GG +
Sbjct: 124 VVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCK 183
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
QI++L E + P+ H ER+ LG+ PPKGVLLYGPPGTGKTL ARA A +T+A F+++
Sbjct: 184 DQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVI 243
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDA+G RFD GD EVQRTMLE
Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
L+NQLDGF IKV+ ATNR D LDPALMR GRLDRK+E P RA IL+IH+++
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV---QA 408
M+V D+ ++ LAR + GA++++VC EAGM A+R +DF E I +V A
Sbjct: 364 MSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYA 423
Query: 409 KKKASLNY 416
K A+ Y
Sbjct: 424 KFSATPRY 431
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 153/308 (49%), Positives = 208/308 (67%)
Query: 115 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
VV L D P ++ G VGV+++ Y I LP++ D V M+V+EKP Y+D+GG +
Sbjct: 124 VVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCK 183
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
QI++L E + P+ H ER+ LG+ PPKGVLLYGPPGTGKTL ARA A +T+A F+++
Sbjct: 184 DQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVI 243
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +LVQ ++G+GA++VR+ F++A+ K C+IF DEIDA+G RFD GD EVQRTMLE
Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
L+NQLDGF IKV+ ATNR D LDPALMR GRLDRK+E P RA IL+IH+++
Sbjct: 304 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQ 363
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV---QA 408
M+V D+ ++ LAR + GA++++VC EAGM A+R +DF E I +V A
Sbjct: 364 MSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYA 423
Query: 409 KKKASLNY 416
K A+ Y
Sbjct: 424 KFSATPRY 431
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 157/326 (48%), Positives = 212/326 (65%)
Query: 96 DLDSQRKGKCVVLKTS----YPSVVGLVDPDKLKPGDLVGVNKDSYL------ILDTLPS 145
+L K VV++ S Y ++ +VD D L+ LV V I+ L
Sbjct: 104 ELFDDEKHAVVVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDD 163
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
+ DS +V++ P E ++DIGG E QIQEL E++ LP+TH E ++++G+ PKGV+LY
Sbjct: 164 KIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILY 223
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
G PGTGKTL+A+A A T+ATF++ G LVQ G+GA+LVR FQ+AKE++P I+FID
Sbjct: 224 GEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFID 283
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+GTKRFD+ G++EVQRT+LELLNQLDGF S +K+I ATNR D LDPAL+R G
Sbjct: 284 EIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPG 343
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGML 385
R+DRKIELP P E+ R +I IH+ MT+ V +E + +GA++KAVC EAGML
Sbjct: 344 RIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGML 403
Query: 386 ALRRDATEVNHEDFNEGIIQVQAKKK 411
ALR V +DF + + V KK
Sbjct: 404 ALRAQRKCVGTDDFEKAVKSVMLSKK 429
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 152/313 (48%), Positives = 210/313 (67%)
Query: 98 DSQRKGKCVV-LKTSYPSVVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKA 153
++ K K V+ +K VVGL + P ++ G VGV++ Y I LP D V
Sbjct: 115 NADTKSKYVINIKQIAKFVVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTM 174
Query: 154 MEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 213
M V+EKP Y+D+GG ++QI++L E + LP+ ERF KLG+ PPKG+LLYGPPGTGKT
Sbjct: 175 MTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKT 234
Query: 214 LMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTK 273
L ARA A +T+ATF+++ G +LVQ ++G+GA++VR+ F++A+ K CIIF DE+DAIG
Sbjct: 235 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGA 294
Query: 274 RFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEL 333
RFD GD EVQRTMLEL+ QLDGF IKV+ ATNR + LDPAL+R GR+DRK+E
Sbjct: 295 RFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEF 354
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 393
P E RA I +IHS+ M+V D+ +E ++R + GA+L++VC EAGM A+R
Sbjct: 355 SLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKV 414
Query: 394 VNHEDFNEGIIQV 406
N +DF + + +V
Sbjct: 415 ANEKDFLKAVDKV 427
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 170/399 (42%), Positives = 249/399 (62%)
Query: 25 IRASRLLDN-EIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMN 83
+ A+ + DN ++ L E ++ LE + ++KE +E+IK +L N ++ L+
Sbjct: 3 VTATPMPDNLRVKALSEYRKKL-LEHKEIEGRLKEKREEIKDLTKLYDKSENDLKALQSV 61
Query: 84 PEDEAEEDGANIDLDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLI 139
+ E L + K +V T+ P VVG +D KLK G V ++ + I
Sbjct: 62 GQIVGEV------LKQLTEDKFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTI 115
Query: 140 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPP 199
+ LP E D V M ++ Y+ IGGL QI+EL E I LP+ + E F ++G+ PP
Sbjct: 116 MRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPP 175
Query: 200 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 259
KG LLYGPPGTGKTL+ARA A+Q +A FLK+ +V +IG+ A+L+R+ F A++ P
Sbjct: 176 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQP 235
Query: 260 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 319
CIIF+DEIDAIG +RF S DRE+QRT++ELLNQ+DGF S ++K+I ATNR D LDP
Sbjct: 236 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDP 295
Query: 320 ALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVC 379
AL+R GRLDRKIE+P P+E+AR IL+IH+ K+ H ++++E + + +D+FNGA L+ VC
Sbjct: 296 ALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVC 355
Query: 380 VEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--ASLNY 416
EAG+ A+R + V DF + + +V KK + L+Y
Sbjct: 356 TEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKLESKLDY 394
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 150/290 (51%), Positives = 198/290 (68%)
Query: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
VGV+++ Y I LP + D V M+V+EKP Y+D+GG ++QI++L E + P+ H E
Sbjct: 3 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 62
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
RF LG+ PPKGVLL+GPPGTGKTL ARA A +T+A F+++ G +LVQ ++G+GA++VR+
Sbjct: 63 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 122
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
F++A+ K C+IF DEIDAIG RFD GD EVQRTMLEL+NQLDGF IKV+
Sbjct: 123 LFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLM 182
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATNR D LDPALMR GRLDRKIE P E R I +IH+R M+V D+ FE LAR +
Sbjct: 183 ATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPN 242
Query: 370 FNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLNY 416
GA++++VC EAGM A+R +DF E + I+ AK A+ Y
Sbjct: 243 STGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 292
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 154/327 (47%), Positives = 221/327 (67%)
Query: 97 LDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 152
LD++R +V +S P VVG VD +KL G V ++ + I+ TLP E D V
Sbjct: 71 LDNER---FIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVY 127
Query: 153 AMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 212
M ++ Y+ +GGL QI+EL E+I LP+ + E F ++G++PPKGVLLYGPPGTGK
Sbjct: 128 NMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGK 187
Query: 213 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 272
TL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG
Sbjct: 188 TLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGG 247
Query: 273 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 332
+RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE
Sbjct: 248 RRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIE 307
Query: 333 LPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 392
+P P+E+AR +L+IH+ + H ++++E + + + FNGA L+ VC EAGM A+R +
Sbjct: 308 IPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERD 367
Query: 393 EVNHEDFNEGIIQVQ-AKKKASLNYYA 418
V HEDF + + ++ AKK S +Y+
Sbjct: 368 YVVHEDFMKAVRKLNDAKKLESSAHYS 394
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 161/359 (44%), Positives = 232/359 (64%)
Query: 61 EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVD 120
++ +++++ P V +I+E N E AE++ I+L ++ K VV S+ V
Sbjct: 85 DRQRMSEEQPLQVARCTKIIE-N-EQSAEKNAYVINL--KQIAKFVV------SLGERVS 134
Query: 121 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA 180
P ++ G VG +++ Y I LP + D V M+V+EKP Y D+GG ++QI+ L E
Sbjct: 135 PTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREV 194
Query: 181 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 240
+ LP+ ERF KLG+ PPKG++LYGPPGTGKTL ARA A +T+ATF+++ G +LVQ ++
Sbjct: 195 VELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYV 254
Query: 241 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS 300
G+GA++VR+ F++A+ K CIIF DEIDAIG RFD GD EVQRTMLEL+ QLDGF
Sbjct: 255 GEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 314
Query: 301 SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNF 360
IKV+ ATNR + LD ALMR GR+DRK+E P E RA IL+IH++ M + D+ +
Sbjct: 315 PRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRW 374
Query: 361 EELARSTDDFNGAQLKAVCVEAGMLALR---RDATEVNHEDFNEGIIQVQAKKKASLNY 416
E +AR GA+L++VC EAGM A+R R ATE + D + +++ K ++ +Y
Sbjct: 375 ELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADY 433
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 174/396 (43%), Positives = 245/396 (61%)
Query: 31 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIK-LNKQLPYLVGNIVEILEMNPEDEAE 89
+D E EE +R+ L+L ++ K+K + IK L ++ NI + + +
Sbjct: 5 VDPEREQALEEYKRSLLDLREWEAKLKALRMGIKDLQREFDISEENIKAL-----QSVGQ 59
Query: 90 EDGANI-DLDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLP 144
G + LD +R +V +S P VVG VD KLK G V ++ + I+ LP
Sbjct: 60 IIGEVLKQLDEER---FIVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLP 116
Query: 145 SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLL 204
E D V M +++ ++ IGGL QI+EL E I LP+ + E FQ++G++PPKGVLL
Sbjct: 117 REVDPLVYNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLL 176
Query: 205 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 264
YGPPGTGKTL+ARA A+ FLK+ +V +IG+ A+L+R+ F AKE PCIIF+
Sbjct: 177 YGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFM 236
Query: 265 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 324
DEIDAIG +RF S DRE+QRT++ELLNQLDGF + K+I ATNR D LDPAL+R+
Sbjct: 237 DEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRA 296
Query: 325 GRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGM 384
GRLDRKIE+P P+E R IL+IHS + + D++FE + + +D NGA L+ V EAG+
Sbjct: 297 GRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGL 356
Query: 385 LALR--RDATEVNHEDFNEGIIQV-QAKK-KASLNY 416
A++ RDA +N +DFN + +V +AKK + L Y
Sbjct: 357 FAIKDYRDA--INQDDFNRAVRKVAEAKKLEGKLEY 390
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 153/326 (46%), Positives = 222/326 (68%)
Query: 97 LDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 152
LD++R +V +S P VVG VD +KL G V ++ + I+ LP E D V
Sbjct: 70 LDNER---LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVY 126
Query: 153 AMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 212
M ++ Y+ +GGL QI+EL E+I LP+ + E F ++G++PPKGVLLYGPPGTGK
Sbjct: 127 NMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGK 186
Query: 213 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 272
TL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A+E PCIIF+DEIDAIG
Sbjct: 187 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGG 246
Query: 273 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 332
+RF S DRE+QRT++ELLNQLDGF + ++K+I ATNR D+LDPAL+R GRLDRKIE
Sbjct: 247 RRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 306
Query: 333 LPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 392
+P P+E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R +
Sbjct: 307 IPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERD 366
Query: 393 EVNHEDFNEGIIQV-QAKKKASLNYY 417
V HEDF + + ++ +AKK S ++Y
Sbjct: 367 YVIHEDFMKAVRKLSEAKKLESSSHY 392
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 153/326 (46%), Positives = 221/326 (67%)
Query: 97 LDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 152
LD++R +V +S P VVG VD +KL G V ++ + I+ LP E D V
Sbjct: 70 LDNER---LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVY 126
Query: 153 AMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 212
M ++ Y+ +GGL QI+EL E+I LP+ + E F ++G++PPKGVLLYGPPGTGK
Sbjct: 127 NMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGK 186
Query: 213 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 272
TL+ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A+E PCIIF+DEIDAIG
Sbjct: 187 TLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGG 246
Query: 273 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 332
+RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE
Sbjct: 247 RRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 306
Query: 333 LPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 392
+P P+E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R +
Sbjct: 307 IPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERD 366
Query: 393 EVNHEDFNEGIIQV-QAKKKASLNYY 417
V HEDF + + ++ +AKK S ++Y
Sbjct: 367 YVIHEDFMKAVRKLSEAKKLESSSHY 392
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 162/386 (41%), Positives = 244/386 (63%)
Query: 41 ELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED--EAEEDGANID-- 96
E +RT L+SY+ K+ E ++ + K L + + + + D + G +
Sbjct: 19 EDERTKA-LNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEV 77
Query: 97 LDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 152
L + K +V T+ P VVG ++ ++LK G V ++ + I+ LP E D V
Sbjct: 78 LKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 137
Query: 153 AMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 212
M ++ Y+D+GGL +QI+EL E + LP+ + E F+++G+ PPKG LL+GPPGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 213 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 272
TL+ARA A+Q + FLK+ +V +IG+ A+++R+ F A++ PCI+F+DEIDAIG
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257
Query: 273 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 332
+RF S DRE+QRT++ELLNQLDGF S ++KVI ATNR D LDPAL+R GRLDRKIE
Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317
Query: 333 LPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 392
+ P+E++R IL+IHS K+T H +++FE + + +D F+ A L+ VC EAGM A+R +
Sbjct: 318 IGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAERE 377
Query: 393 EVNHEDFNEGIIQV-QAKK-KASLNY 416
V EDF + + +V AK+ + L+Y
Sbjct: 378 FVIDEDFMKAVRKVGDAKRLETKLDY 403
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 162/386 (41%), Positives = 244/386 (63%)
Query: 41 ELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED--EAEEDGANID-- 96
E +RT L+SY+ K+ E ++ + K L + + + + D + G +
Sbjct: 19 EDERTKA-LNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEV 77
Query: 97 LDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 152
L + K +V T+ P VVG ++ ++LK G V ++ + I+ LP E D V
Sbjct: 78 LKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 137
Query: 153 AMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 212
M ++ Y+D+GGL +QI+EL E + LP+ + E F+++G+ PPKG LL+GPPGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 213 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 272
TL+ARA A+Q + FLK+ +V +IG+ A+++R+ F A++ PCI+F+DEIDAIG
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257
Query: 273 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 332
+RF S DRE+QRT++ELLNQLDGF S ++KVI ATNR D LDPAL+R GRLDRKIE
Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317
Query: 333 LPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 392
+ P+E++R IL+IHS K+T H +++FE + + +D F+ A L+ VC EAGM A+R +
Sbjct: 318 IGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAERE 377
Query: 393 EVNHEDFNEGIIQV-QAKK-KASLNY 416
V EDF + + +V AK+ + L+Y
Sbjct: 378 FVIDEDFMKAVRKVGDAKRLETKLDY 403
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 159/409 (38%), Positives = 246/409 (60%)
Query: 14 DQLSSMTTDDIIRASRL--LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPY 71
D L DD + L L + +K + + E S K ++ QE+IK + +P
Sbjct: 29 DSLEGTGADDGDEYATLKKLQRHLEYIKLQEEYIKDEQRSLKRELVRAQEEIKRIQSVPL 88
Query: 72 LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVG 131
++G +E ++ N G+N V++ ++ +D +KLKP V
Sbjct: 89 VIGQFMEAIDQNTGIVQSSTGSNY-----------VVR-----ILSTLDREKLKPSSSVA 132
Query: 132 VNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERF 191
+++ S ++D LP E DS + + +EKP Y D+GGL+ Q QE+ EA+ LP+TH + +
Sbjct: 133 LHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTHFDLY 192
Query: 192 QKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAF 251
+++G+ PP+GVLLYGPPGTGKT++ +A A T A+F+++ G + VQ ++G+G ++VRD F
Sbjct: 193 KQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVF 252
Query: 252 QLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAAT 311
++A+E SP IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI AT
Sbjct: 253 RMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMAT 312
Query: 312 NRADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARSTDDF 370
NRAD LDPAL+R GRLDRKIE P + R++ + KM++ P+V+ + L +
Sbjct: 313 NRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPL 372
Query: 371 NGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI-IQVQAKKKAS-LNYY 417
+GA + A+ EAG+ A+R++ + D + QV+ ++A L +Y
Sbjct: 373 SGAVIAAIMQEAGLRAVRKNRYNIIQSDLEDAYSAQVKTGQEADRLEFY 421
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 156/245 (63%), Positives = 186/245 (75%)
Query: 36 RVLKEELQRTNLELDSYKEKVKENQEKIKLNKQL----PYLVGNIVEILEMNPED--EAE 89
R+L E++ E+ +++ ++KIK N + L + ++E+ D + E
Sbjct: 11 RLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQE 70
Query: 90 EDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDS 149
EDGANIDLDSQRKGKC V+KTS GVNKDSYLIL+TLP+EYDS
Sbjct: 71 EDGANIDLDSQRKGKCAVIKTSTRQ----------------GVNKDSYLILETLPTEYDS 114
Query: 150 RVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 209
RVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE+F+ LG++PPKGVL+YGPPG
Sbjct: 115 RVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 174
Query: 210 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 269
TGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DA
Sbjct: 175 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 234
Query: 270 IGTKR 274
IGTKR
Sbjct: 235 IGTKR 239
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 57/93 (61%), Positives = 79/93 (84%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS 111
+L+++P D+ EEDGANIDLDSQRKGKC V+KTS
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTS 92
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 148/307 (48%), Positives = 200/307 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ D+ + + +K VVGL D P ++ G VGV++ Y I LP + D V
Sbjct: 89 INADTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSV 148
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M V+EKP YNDIGG ++Q+++L E + +P+ ERF LG+ PPKGVLLYGPPGTG
Sbjct: 149 TMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTG 208
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+ + G +LVQ ++G+GA++VR+ FQ+AK K CI+FIDE+DAIG
Sbjct: 209 KTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIG 268
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
R D GD EVQRTMLE++NQLDGF + IKV+ ATNR D LD AL+R GR+DR+I
Sbjct: 269 GSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRI 328
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+ M + DV FE LAR + G+ +++VC EAGM A+R
Sbjct: 329 EFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARR 388
Query: 392 TEVNHED 398
+ +D
Sbjct: 389 KTITEKD 395
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 148/307 (48%), Positives = 200/307 (65%)
Query: 95 IDLDSQRKGKCVVLKTSYPSVVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
I+ D+ + + +K VVGL D P ++ G VGV++ Y I LP + D V
Sbjct: 89 INADTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSV 148
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
M V+EKP YNDIGG ++Q+++L E + +P+ ERF LG+ PPKGVLLYGPPGTG
Sbjct: 149 TMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTG 208
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL ARA A +T+A F+ + G +LVQ ++G+GA++VR+ FQ+AK K CI+FIDE+DAIG
Sbjct: 209 KTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIG 268
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
R D GD EVQRTMLE++NQLDGF + IKV+ ATNR D LD AL+R GR+DR+I
Sbjct: 269 GSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRI 328
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E P E R I +IH+ M + DV FE LAR + G+ +++VC EAGM A+R
Sbjct: 329 EFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARR 388
Query: 392 TEVNHED 398
+ +D
Sbjct: 389 KTITEKD 395
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 150/346 (43%), Positives = 220/346 (63%)
Query: 61 EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVD 120
++ ++ ++ P V +I++ DE + D + ++ ++ K VV S ++
Sbjct: 87 DRQRMAEEQPLQVARCTKIIQ----DEKDSDKSKYVINVKQIAKFVVNLGERVSPTD-IE 141
Query: 121 PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA 180
D L D + V+++ Y I+ LP + D V M V++KP Y D+GG ++QI++L E
Sbjct: 142 ED-LSHTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREV 200
Query: 181 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 240
+ +P+ ERF LG+ PPKG LLYGPPGTGKTL ARA A +T+ATF+++ G +LVQ ++
Sbjct: 201 VEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYV 260
Query: 241 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS 300
G+GA++VR+ F++A+ K CIIF DEIDA+G RFD GD EVQRTMLEL+ QLDGF
Sbjct: 261 GEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFD 320
Query: 301 SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNF 360
+ IKV+ ATNR LDPALMR GR+DRKIE P E RA IL+IH++ M+V D+ +
Sbjct: 321 ARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRW 380
Query: 361 EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 406
E ++R + GA+L++V EAGM A+R +DF + +V
Sbjct: 381 ELISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLAAVDKV 426
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 164/405 (40%), Positives = 242/405 (59%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKE---KVKENQEKIKLN-KQLPYLVG 74
M+T++ + L + R++ E + L L+ E K+K++ +K + + K + Y +G
Sbjct: 1 MSTEETKKEQALQNYRDRLI--EHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQY-IG 57
Query: 75 NIV-EILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVN 133
I+ E+L E+ N + VV +Y L L PG V ++
Sbjct: 58 EIIGEVLRSLDEERFIVKACN-------GPRYVVRCANYQDKAHL-----LVPGARVTLD 105
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQK 193
+ IL LP E D + M + + Y +IGGL QI+EL E + LP+ E F +
Sbjct: 106 LTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIR 165
Query: 194 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 253
+G++ PKGVLLYGPPGTGKTL+ARA A+ A FLK+ +V +IG+ A+++R+ F
Sbjct: 166 VGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGY 225
Query: 254 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 313
A++ PC+IF+DEIDAIG +RF S DRE+QRT++ELLNQ+DGF + ++K+I ATNR
Sbjct: 226 ARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNR 285
Query: 314 ADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGA 373
D+LDPAL+R GRLDRKIE+P P+E R +L+IH+ +T H DV++E +A+ D FN A
Sbjct: 286 PDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAA 345
Query: 374 QLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK--ASLNY 416
L+ VC EAGM A+R + V EDF + + + Q KK L+Y
Sbjct: 346 DLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDY 390
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 162/380 (42%), Positives = 242/380 (63%)
Query: 49 LDSYKEKVKENQE---KIKLNKQLPYLVGNIVEILEMNPEDEAEED-GANI-DLDSQRKG 103
L +Y+ K+ E++E K+K + Y V N E + + +A + G + ++ Q
Sbjct: 18 LTNYRTKLLEHREIESKLKALRD-KYKVVN-AEYEKSEDDLKALQSVGQMVGEILKQLTP 75
Query: 104 KCVVLKTSY-PS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 158
++K S P VVG ++ +KLKPG V ++ + I+ LP E D V M ++
Sbjct: 76 DNFIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHED 135
Query: 159 KPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 218
+Y +IGGL +QI+EL E I LP+ + + F ++G+ PPKG LLYGPPGTGKTL+ARA
Sbjct: 136 PGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARA 195
Query: 219 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 278
A+Q +A FLK+ +V +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF
Sbjct: 196 IASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEG 255
Query: 279 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSE 338
S DRE+QRT++ELLNQ+DGF + ++K+I ATNR D LDPAL+R GRLDRK+E+P P+E
Sbjct: 256 TSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNE 315
Query: 339 EARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
AR IL+IH+ + ++++E + + +D FNGA L+ +C EAG+ ALR D V ED
Sbjct: 316 VARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQED 375
Query: 399 FNEGIIQVQAKKK--ASLNY 416
F + + ++ KK + L+Y
Sbjct: 376 FMKAVRKIADNKKLESRLDY 395
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 153/394 (38%), Positives = 236/394 (59%)
Query: 9 SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQ 68
S + + ++ D+ + L+ E+ +L + + E K ++ QE++K K
Sbjct: 15 SKLNNVSATNSNETDVYLKLKKLEKELDLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKS 74
Query: 69 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGD 128
+P ++G +E P DE N + S G V++ ++ +D + LK
Sbjct: 75 VPLVIGQFLE-----PIDE------NTGIVSSTTGSNYVVR-----ILSTLDRELLKASS 118
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
V +++ S ++D LP E DS + + D+KP Y D+GGL+ Q QE+ EA+ LP+T
Sbjct: 119 SVALHRHSNALVDILPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQG 178
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
+ + ++G+ PP+GVLLYGPPGTGKT++ +A A T A+F+++ G + VQ ++G+G ++VR
Sbjct: 179 DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVR 238
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
D F+LA+E SP IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI
Sbjct: 239 DVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVI 298
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARST 367
ATNRAD LDPAL+R GRLDRKIE P + R++ + KM++ P+ + + L
Sbjct: 299 MATNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRN 358
Query: 368 DDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 401
D +GA + A+ EAG+ A+R++ + D E
Sbjct: 359 DPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLEE 392
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 153/394 (38%), Positives = 236/394 (59%)
Query: 9 SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQ 68
S + + ++ D+ + L+ E+ +L + + E K ++ QE++K K
Sbjct: 15 SKLNNVSATNSNETDVYLKLKKLEKELDLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKS 74
Query: 69 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGD 128
+P ++G +E P DE N + S G V++ ++ +D + LK
Sbjct: 75 VPLVIGQFLE-----PIDE------NTGIVSSTTGSNYVVR-----ILSTLDRELLKASS 118
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
V +++ S ++D LP E DS + + D+KP Y D+GGL+ Q QE+ EA+ LP+T
Sbjct: 119 SVALHRHSNALVDILPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQG 178
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
+ + ++G+ PP+GVLLYGPPGTGKT++ +A A T A+F+++ G + VQ ++G+G ++VR
Sbjct: 179 DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVR 238
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
D F+LA+E SP IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI
Sbjct: 239 DVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVI 298
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARST 367
ATNRAD LDPAL+R GRLDRKIE P + R++ + KM++ P+ + + L
Sbjct: 299 MATNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRN 358
Query: 368 DDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 401
D +GA + A+ EAG+ A+R++ + D E
Sbjct: 359 DPLSGAVIAAIMQEAGLRAVRKNRYMILQSDLEE 392
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 153/406 (37%), Positives = 244/406 (60%)
Query: 16 LSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELD--SYKEKVKENQEKIKLNKQLPYLV 73
++S D+ + L+ ++ +L +LQ ++ D S K ++ QE++K + +P ++
Sbjct: 1 MNSTEEIDLYNRWKALERQLEML--DLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVI 58
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVN 133
G +E ++ N G+N V++ ++ +D + LKP V +
Sbjct: 59 GQFLEAIDQNTAIVGSTTGSNY-----------VVR-----ILSTLDRELLKPSASVALQ 102
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQK 193
+ S ++D LP E DS + + DE+P Y D+GGL+ Q QE+ EA+ LP+T + +++
Sbjct: 103 RHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQ 162
Query: 194 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 253
+G+ PP+GVLLYGPPGTGKT++ +A A T A F+++ G + VQ ++G+G ++VRD F++
Sbjct: 163 IGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRM 222
Query: 254 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 313
A+E +P IIFIDEIDAI TKRFD++ DREVQR ++ELL Q+DGF +KVI ATNR
Sbjct: 223 ARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNR 282
Query: 314 ADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARSTDDFNG 372
AD LDPAL+R GRLDRKIE P + + R++ Q + KM + P+V+ + D +G
Sbjct: 283 ADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSG 342
Query: 373 AQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
AQ+ A+ +AG+LA+R+ + D E +A K + +A
Sbjct: 343 AQIAAIMQDAGLLAVRKSRGVILQSDIEEAY--ARAVKPTDMEQFA 386
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 158/388 (40%), Positives = 238/388 (61%)
Query: 34 EIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGA 93
E R ++ ++++ L++ +K ++ ++ +K + + ++G +++ LE DE
Sbjct: 16 EHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLKQLE----DE------ 65
Query: 94 NIDLDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDS 149
K +V +S P VVG ++ KL G V ++ + ++ LP E D
Sbjct: 66 ----------KFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDP 115
Query: 150 RVKAM--EVD--EKPTE--DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVL 203
V M ++D E T +YN IGGL +QI+++ E + LP+ + ++++G++ PKGVL
Sbjct: 116 LVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVL 175
Query: 204 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIF 263
LYGPPGTGKTL+ARA A+ N F+++ +V +IG+ A+++R+ F AKE PCIIF
Sbjct: 176 LYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIF 235
Query: 264 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 323
+DEIDAIG +RF S DRE+QRT++ELLN LDGF +K+I ATNR D+LDPAL+R
Sbjct: 236 MDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVR 295
Query: 324 SGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAG 383
GRLDRKIE+P P+E AR IL+IH+ KMT D+++E + R D FNGA L+ VC EAG
Sbjct: 296 PGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAG 355
Query: 384 MLALRRDATEVNHEDFNEGIIQVQAKKK 411
M A+R V EDF + ++ KK
Sbjct: 356 MFAIRAMRDYVIEEDFYKAARKISEGKK 383
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 158/388 (40%), Positives = 238/388 (61%)
Query: 34 EIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGA 93
E R ++ ++++ L++ +K ++ ++ +K + + ++G +++ LE DE
Sbjct: 16 EHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLKQLE----DE------ 65
Query: 94 NIDLDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDS 149
K +V +S P VVG ++ KL G V ++ + ++ LP E D
Sbjct: 66 ----------KFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDP 115
Query: 150 RVKAM--EVD--EKPTE--DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVL 203
V M ++D E T +YN IGGL +QI+++ E + LP+ + ++++G++ PKGVL
Sbjct: 116 LVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVL 175
Query: 204 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIF 263
LYGPPGTGKTL+ARA A+ N F+++ +V +IG+ A+++R+ F AKE PCIIF
Sbjct: 176 LYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIF 235
Query: 264 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 323
+DEIDAIG +RF S DRE+QRT++ELLN LDGF +K+I ATNR D+LDPAL+R
Sbjct: 236 MDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVR 295
Query: 324 SGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAG 383
GRLDRKIE+P P+E AR IL+IH+ KMT D+++E + R D FNGA L+ VC EAG
Sbjct: 296 PGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAG 355
Query: 384 MLALRRDATEVNHEDFNEGIIQVQAKKK 411
M A+R V EDF + ++ KK
Sbjct: 356 MFAIRAMRDYVIEEDFYKAARKISEGKK 383
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 159/374 (42%), Positives = 235/374 (62%)
Query: 47 LELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANI-DLDSQRKGKC 105
L+L+ K+ + +E I+ +Q+ L E E + D+ ++ L+ G
Sbjct: 63 LKLERIKDYLLMEEEFIRNQEQMKPLEEKQEE--ERSKVDDLRGTSMSVVTLEEIIDGNH 120
Query: 106 VVLKTS-----YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVD--E 158
V++ TS Y S++ VD D L+PG +N + ++ + D V M+V+ E
Sbjct: 121 VIVSTSVGSEHYVSILSFVDKDLLEPGCSNLLNHKLHAVIVVFMDDTDPLVTVMKVEKVE 180
Query: 159 K-PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 217
K P E Y DI GL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGT K
Sbjct: 181 KAPQETYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK----- 235
Query: 218 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 277
A A +T+ATFL++AG +L+Q ++GDG K+VR++F++A+E +P I+FIDEIDAIGT+R+DS
Sbjct: 236 AVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTRRYDS 295
Query: 278 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPS 337
G+RE+QRTMLELLNQLDGF S +KVI ATNR LDPAL L ++ P P
Sbjct: 296 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRLS-PLPD 354
Query: 338 EEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 397
E+ + I QIH+ +MT+ DV + L + DD +GA +KA+C EAG++ALR +V +E
Sbjct: 355 EKTKKHIFQIHTSRMTLADDVTLD-LIMAKDDLSGADIKAICTEAGLMALREHRMKVTNE 413
Query: 398 DFNEGIIQVQAKKK 411
DF + V KK+
Sbjct: 414 DFKKSKENVLYKKQ 427
Score = 237 (88.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 63/200 (31%), Positives = 106/200 (53%)
Query: 24 IIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMN 83
+++ R+ D +++EE R ++ +EK +E + K+ + V + EI+
Sbjct: 62 LLKLERIKD--YLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTSMSVVTLEEII--- 116
Query: 84 PEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTL 143
DG ++ + + V Y S++ VD D L+PG +N + ++
Sbjct: 117 -------DGNHVIVSTS------VGSEHYVSILSFVDKDLLEPGCSNLLNHKLHAVIVVF 163
Query: 144 PSEYDSRVKAMEVD--EK-PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPK 200
+ D V M+V+ EK P E Y DI GL+ QIQE+ E++ LP+TH E ++++G++PPK
Sbjct: 164 MDDTDPLVTVMKVEKVEKAPQETYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPK 223
Query: 201 GVLLYGPPGTGKTLMARACA 220
GV+LYGPPGT K + R A
Sbjct: 224 GVILYGPPGTVKAVANRTSA 243
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 147/395 (37%), Positives = 233/395 (58%)
Query: 8 DSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNK 67
+ + ++ S DI + L+ E +L + E K ++K QE++K +
Sbjct: 31 NGTVNNNSALSNVNSDIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQ 90
Query: 68 QLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPG 127
+P ++G +E P D+ N + S G V++ ++ +D + LKP
Sbjct: 91 SVPLVIGQFLE-----PIDQ------NTGIVSSTTGMSYVVR-----ILSTLDRELLKPS 134
Query: 128 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTH 187
V +++ S ++D LP + DS + M +EKP Y D+GGL+ Q QE+ EA+ LP+
Sbjct: 135 MSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQ 194
Query: 188 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 247
+ ++++G+ PP+GVLLYGPPGTGKT++ +A A T A F+++ G + V ++G+G ++V
Sbjct: 195 ADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMV 254
Query: 248 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 307
RD F+LA+E +P IIFIDE+D+I TKRFD++ DREVQR ++ELL Q+DGF +KV
Sbjct: 255 RDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKV 314
Query: 308 IAATNRADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARS 366
I ATNRAD LDPAL+R GRLDRKIE P + R++ + KM++ P+ + + L
Sbjct: 315 IMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIR 374
Query: 367 TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 401
D +GA + A+ EAG+ A+R++ + D E
Sbjct: 375 NDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEE 409
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 157/374 (41%), Positives = 223/374 (59%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED--EAEEDGANI-----DLDSQR 101
L+ YK + +++E K L + ++V+ + +D + G I LDS+R
Sbjct: 8 LEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSER 67
Query: 102 KGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVD 157
+V +S P VVG VD L G V ++ + I+ LP E D V M ++
Sbjct: 68 ---FIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIE 124
Query: 158 EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 217
+ + +GGL +QI+EL E I LP+ + E F ++G++PPKGVLLYGPPGTGKTL+AR
Sbjct: 125 DPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLAR 184
Query: 218 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 277
A AA FLK+ +V +IG+ A+++R+ F AKE PC+IF+DEIDAIG +RF
Sbjct: 185 AVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSE 244
Query: 278 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPS 337
S DRE+QRT++ELLNQ+DGF + K+I ATNR D LDPAL+R GRLDRKIE+P P+
Sbjct: 245 GTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPN 304
Query: 338 EEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 397
E R IL+IH K++ ++++E L + TD NGA L+ V EAG +A++ D V
Sbjct: 305 EVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQS 364
Query: 398 DFNEGIIQVQAKKK 411
D +V KK
Sbjct: 365 DLMSAARKVADLKK 378
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 153/379 (40%), Positives = 226/379 (59%)
Query: 41 ELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED--EAEEDGANID-- 96
E + N L+ +K K+ E++ KQ + ++ ++ + D + G I
Sbjct: 49 EQEAHNKALNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEV 108
Query: 97 LDSQRKGKCVVLKTSYPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVK 152
+ + K +V +S P +VG+ VD KLK G V ++ + I+ LP E D V
Sbjct: 109 MKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVY 168
Query: 153 AMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 212
M E+ ++ IGGL +QI+EL E I LP+ + E FQ++G++PPKGVLLYGPPGTGK
Sbjct: 169 NMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGK 228
Query: 213 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 272
TL+A+A AA A F+ +V +IG+ A+++R+ F AKE PCIIF+DE+DAIG
Sbjct: 229 TLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGG 288
Query: 273 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 332
+RF S DRE+QRT++ELL Q+DGF + + K+I ATNR D LDPAL+R GRLDRK+E
Sbjct: 289 RRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVE 348
Query: 333 LPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 392
+P P+E R I +IH+ K+ + +FE + +D FNGA ++ EAG A+R D
Sbjct: 349 IPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRD 408
Query: 393 EVNHEDFNEGIIQVQAKKK 411
+N +D + + +V KK
Sbjct: 409 HINPDDLMKAVRKVAEVKK 427
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 154/378 (40%), Positives = 225/378 (59%)
Query: 49 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPED-EAEEDGANI--DLDSQRKGKC 105
L +K+K+ E+++ K L + ++ + E D +A + I ++ Q +
Sbjct: 48 LSKFKDKLLEHRKWDARLKDLRLSIRDLDKDYEKTENDIKALQSVGQIIGEVLKQLDDER 107
Query: 106 VVLKTSY-PS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
++KTS P +VG + + LK G V ++ + I+ LP E D V M E
Sbjct: 108 YIVKTSSGPRYIVGCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPG 167
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
+N IGGL +QI+EL E I LP+ + E F ++G++PPKGVLLYGPPGTGKTL+A+A A
Sbjct: 168 EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
A A F+ +V +IG+ A+L+R+ F AKE PCIIF+DE+DAIG +RF S
Sbjct: 228 ATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 287
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
DRE+QRT++ELLNQ+DGF + + K+I ATNR D LDPAL+R+GRLDRKIE+ P+E
Sbjct: 288 ADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R I +IH+ K+ + +FE + +D FNGA ++ V EAG A+R D + D
Sbjct: 348 RLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLM 407
Query: 401 EGIIQVQAKKK--ASLNY 416
+ + +V KK L+Y
Sbjct: 408 KAVRKVADVKKLEGKLDY 425
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 138/354 (38%), Positives = 207/354 (58%)
Query: 48 ELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVV 107
E + K++ QEK+K + +P ++G +E ++ N G+N C
Sbjct: 13 EQKNLKKEFLHAQEKVKQIQSIPLVIGQFLEAVDQNTVIVGSITGSN----------C-- 60
Query: 108 LKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDI 167
Y ++ +D + LKP V ++K S +++ LP E +S + + D+KP Y DI
Sbjct: 61 ----YFCILSTIDQELLKPNASVALHKHSNTLVNVLPPEAESSIMMLTSDQKPNVIYADI 116
Query: 168 GGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATF 227
G ++ Q QE+ EA+ LP+TH E ++++G+ PP+GVL+YGPPG GKT++A+ A A F
Sbjct: 117 GSMDIQKQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAF 176
Query: 228 LKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQR 287
+ + G + V ++G+G +++ D F L KE +P IIFIDEIDAI TKRFD++ DREVQR
Sbjct: 177 IHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEIDAIATKRFDAQTGADREVQR 236
Query: 288 TMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQI 347
+LELLNQ+DGF + +K I ATNR D LDP L+R G LD KIE P P R I
Sbjct: 237 ILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLPDHRKRLIFSTI 296
Query: 348 HSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 401
S KM + +VN E+ D +GA + ++C E+GML + + +DF +
Sbjct: 297 TS-KMNLSEEVNVEDYVACPDKISGADINSICQESGMLTVCENCHIFLAKDFKK 349
>UNIPROTKB|E9PS45 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] GO:GO:0001824 EMBL:AC090559 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00980661 ProteinModelPortal:E9PS45 SMR:E9PS45
PRIDE:E9PS45 Ensembl:ENST00000527906 ArrayExpress:E9PS45
Bgee:E9PS45 Uniprot:E9PS45
Length = 175
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 121/176 (68%), Positives = 152/176 (86%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVN 133
+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKE 175
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 116/260 (44%), Positives = 165/260 (63%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+ K +D KPT + ++ G+++ QE+ E + + +E+FQ LG R PKG+LL GPP
Sbjct: 144 SKAKLFNMD-KPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPP 201
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+A+A A + F ++G + V+MF+G GA VRD F AK+ +PCIIFIDEID
Sbjct: 202 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEID 261
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ ++L ++DGF +D + VIAATNR DILDPAL+R GR D
Sbjct: 262 AVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFD 321
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ L P R IL+IH++ + VN E LA+ T F+GA L + EA +LA R
Sbjct: 322 RRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAAR 381
Query: 389 RDATEVNHEDFNEGIIQVQA 408
++ V ED E I +V A
Sbjct: 382 KNRKVVETEDLEESIDRVIA 401
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 112/265 (42%), Positives = 170/265 (64%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+ K + +EK + D+ G +++ QEL+E + + +F +LG R PKGVLL GPP
Sbjct: 146 SKAK-LYTEEKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPP 203
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+A+ACA + F ++G V+MF+G GA VRD F+ AK+ +PC+IFIDEID
Sbjct: 204 GTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEID 263
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ +LL ++DGFS+++ I +IAATNRADILDPAL+R GR D
Sbjct: 264 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFD 323
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R+I + P R +L++H+R + VN + +A T F+GA L+ + EA ++A R
Sbjct: 324 RQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAAR 383
Query: 389 RDATEVNHEDFNEG---IIQVQAKK 410
++ +++ D +E +I AKK
Sbjct: 384 QNKKKIDARDIDEATDRVIAGPAKK 408
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 112/251 (44%), Positives = 161/251 (64%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
SR K M + + +ND+ G+++ +ELIE IV + H++RFQKLG + PKG LL G P
Sbjct: 141 SRAKLM-TENRNKVTFNDVAGIDEAKEELIE-IVDFLKHRQRFQKLGGKIPKGCLLIGSP 198
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIFIDEID
Sbjct: 199 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LD AL+R GR D
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFD 318
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +I+ +H +K+ PDVN +AR T F+GA L + EA ++A R
Sbjct: 319 RQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAAR 378
Query: 389 RDATEVNHEDF 399
+ V DF
Sbjct: 379 LNKKIVTMSDF 389
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 112/251 (44%), Positives = 161/251 (64%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
SR K M + + +ND+ G+++ +ELIE IV + H++RFQKLG + PKG LL G P
Sbjct: 141 SRAKLM-TENRNKVTFNDVAGIDEAKEELIE-IVDFLKHRQRFQKLGGKIPKGCLLIGSP 198
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIFIDEID
Sbjct: 199 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LD AL+R GR D
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFD 318
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +I+ +H +K+ PDVN +AR T F+GA L + EA ++A R
Sbjct: 319 RQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAAR 378
Query: 389 RDATEVNHEDF 399
+ V DF
Sbjct: 379 LNKKIVTMSDF 389
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 551 (199.0 bits), Expect = 5.6e-53, P = 5.6e-53
Identities = 148/424 (34%), Positives = 227/424 (53%)
Query: 7 ED-SNIEDDQLSSMTT--DDIIRASRLL----DNEIRVLKEELQRTNLELDSYKEKVKEN 59
ED S E ++++ T D + A +++ N + E L+R + + +
Sbjct: 390 EDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDK 449
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLV 119
++ + K L V N EI + ED A A + D VV + + ++ +
Sbjct: 450 SARLDIIKLLLSGVPN--EINDAQLEDLASRTHAYVGADLA----AVVREAALRAIKRTI 503
Query: 120 DPDKLKPG-DLVG-VNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQEL 177
K G D+ G V D L S S ++ + E P ++DIGG E+ Q+L
Sbjct: 504 SLQKDTSGLDIFGAVQMDDLEF--ALSSVRQSAMREFMM-ESPNVHWSDIGGQEEVKQKL 560
Query: 178 IEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQ 237
E++ P+TH E F +LGVRPPKGVLLYGPPG KT+ A+A A +T F+ + GP+L
Sbjct: 561 KESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFD 620
Query: 238 MFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLD 297
F+G+ + VR FQ A++ SP +IF DEIDA+ R + S DR V LLN+LD
Sbjct: 621 KFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDN-SSDRVVAA----LLNELD 675
Query: 298 GFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPD 357
G + + V+AATNR D++DPALMR GRLDR + + P+ EAR +I++I + KM D
Sbjct: 676 GIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAED 735
Query: 358 VNFEELARSTDDFNGAQLKAVCVEAGMLALRRD--ATEVNHEDFNEGIIQVQ-AKKKASL 414
V+ + +A T+ +GA++ A+C EAG++A+ D A E+ F ++ ++ A + L
Sbjct: 736 VDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDML 795
Query: 415 NYYA 418
YYA
Sbjct: 796 EYYA 799
Score = 421 (153.3 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 123/363 (33%), Positives = 184/363 (50%)
Query: 46 NLELDSYKEKVKENQ--EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKG 103
N+ K EN E ++N L G V + +P E A DLD G
Sbjct: 142 NMAKSGSKNLSSENMATEIFEINSGLSAQSGTEVGSSQSSPSVNESEPKATEDLDELSPG 201
Query: 104 KCVVLKTSYPSVVGLVDP--D-KLKPGDLVGVNKDSYLILDT-----LPSE------YDS 149
V + S L++ D L + S + ++T LP E Y+
Sbjct: 202 SYKVKEIHIRSPSNLIEAISDMSLDEPRIYKFTAASSMEIETPDLLKLPHEDRTQSAYNQ 261
Query: 150 -RVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGP 207
+ D P+ ++ IGGL+ QI ++ + + LP + E F+ + PP+GVLLYGP
Sbjct: 262 GSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGP 321
Query: 208 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 267
PGTGKT++ RA AA+ NA + GP +V ++G+ +R F+ A+ P IIFIDEI
Sbjct: 322 PGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEI 381
Query: 268 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 327
DA+ KR + +VS + E R + LL LDG ++ ++ VIAATNR + +D AL R GRL
Sbjct: 382 DALAPKRTE-DVS-EAE-SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRL 438
Query: 328 DRKIELPHPSEEARARILQIH-SRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 386
+++IE+ P + AR I+++ S D E+LA T + GA L AV EA + A
Sbjct: 439 EKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRA 498
Query: 387 LRR 389
++R
Sbjct: 499 IKR 501
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 118/268 (44%), Positives = 170/268 (63%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
SR K + DEK + D+ G+++ +EL E IV + + ++ +LG R PKGVLL+G P
Sbjct: 143 SRAK-LHTDEKKRVTFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQP 200
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEID
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ +LL ++DGF+S++ I +IAATNR DILDPAL+R GR D
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFD 320
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R I + P R IL++H + + DV+ + LAR T F GA L + EA +LA R
Sbjct: 321 RHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAAR 380
Query: 389 RDATEVNHEDFNEGIIQVQA--KKKASL 414
R+ +N E+ E I +V A +KK+ +
Sbjct: 381 RNKKVINMEEMEEAIERVIAGPEKKSKV 408
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 118/268 (44%), Positives = 170/268 (63%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
SR K + DEK + D+ G+++ +EL E IV + + ++ +LG R PKGVLL+G P
Sbjct: 143 SRAK-LHTDEKKRVTFADVAGIDEVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQP 200
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEID
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ +LL ++DGF+S++ I +IAATNR DILDPAL+R GR D
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFD 320
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R I + P R IL++H + + DV+ + LAR T F GA L + EA +LA R
Sbjct: 321 RHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAAR 380
Query: 389 RDATEVNHEDFNEGIIQVQA--KKKASL 414
R+ +N E+ E I +V A +KK+ +
Sbjct: 381 RNKKVINMEEMEEAIERVIAGPEKKSKV 408
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 527 (190.6 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 104/254 (40%), Positives = 161/254 (63%)
Query: 155 EVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTL 214
++D K ++D+ G+++ +EL E + + ERF +G + PKGVLL GPPGTGKTL
Sbjct: 162 QMDAKTGVMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTL 220
Query: 215 MARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR 274
+A+A A + F ++G + V+MF+G GA VRD F+ AKE +PC+IFIDEIDA+G +R
Sbjct: 221 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR 280
Query: 275 FDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELP 334
G+ E ++T+ +LL ++DGF + I +IAATNR D+LD ALMR GR DR++ +
Sbjct: 281 GAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVD 340
Query: 335 HPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 394
P R IL++H+R + P+V+ + +AR T F+GA L + EA +L RR + +
Sbjct: 341 APDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400
Query: 395 NHEDFNEGIIQVQA 408
+ ++ + +V A
Sbjct: 401 TLLEIDDAVDRVVA 414
Score = 37 (18.1 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 2 STAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSY 52
S + E+ Q+S D +R+ L L L+ +N+ LDS+
Sbjct: 59 SVDLYENGRTAIVQVSDPEVDRTLRSRVDLPTNAPELIARLRDSNIRLDSH 109
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 110/251 (43%), Positives = 163/251 (64%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
SR + M D + ++D+ G+E+ +ELIE IV + H+++F KLG + PKG LL G P
Sbjct: 143 SRARLM-TDSRGKVTFDDVAGIEEAKEELIE-IVDFLKHRQKFTKLGGKIPKGCLLIGSP 200
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIF+DEID
Sbjct: 201 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LDPAL+R GR D
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFD 320
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +I+ +H++K+ + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 RQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR 380
Query: 389 RDATEVNHEDF 399
D V DF
Sbjct: 381 LDKKIVTMCDF 391
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 110/251 (43%), Positives = 163/251 (64%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
SR + M D + ++D+ G+E+ +ELIE IV + H+++F KLG + PKG LL G P
Sbjct: 143 SRARLM-TDSRGKVTFDDVAGIEEAKEELIE-IVDFLKHRQKFTKLGGKIPKGCLLIGSP 200
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARA A + N F ++G V+MF+G GA VRD F+ K+ +PCIIF+DEID
Sbjct: 201 GTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G R G+ E ++T+ +LL ++DGF S++ + +IAATNR D+LDPAL+R GR D
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFD 320
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +I+ +H++K+ + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 RQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR 380
Query: 389 RDATEVNHEDF 399
D V DF
Sbjct: 381 LDKKIVTMCDF 391
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/257 (42%), Positives = 163/257 (63%)
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
DEK + D+ G +++ QEL+E + + +F ++G R PKGVLL GPPGTGKTL+A
Sbjct: 154 DEKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLA 212
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
RA A + F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEIDA+G +R
Sbjct: 213 RAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGA 272
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
G E ++T+ +LL ++DGF +++ I +IAATNR DILDPAL+R GR DR+I + P
Sbjct: 273 GLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRP 332
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
R +L++H+R + ++N +A T F+GA L+ + EA ++A R+D +++
Sbjct: 333 DVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDM 392
Query: 397 EDFNEG---IIQVQAKK 410
D +E +I AKK
Sbjct: 393 SDIDEATDRVIAGPAKK 409
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 113/254 (44%), Positives = 164/254 (64%)
Query: 149 SRVKAM-EVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGP 207
SR K + E + T + D+ G+++ +EL E I+ + ++F KLG R PKGVLL GP
Sbjct: 138 SRAKLLTEAQGRVT--FEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGP 194
Query: 208 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 267
PGTGKTL+ARA A + F ++G V+MF+G GA VRD F K+ +PCIIFIDEI
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEI 254
Query: 268 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 327
DA+G R G E ++T+ +LL ++DGF S++ + +IAATNR D+LDPAL+R GR
Sbjct: 255 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRF 314
Query: 328 DRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 387
DR++ +P P + R IL++H++K + DV+ +AR T F+GA L V EA +LA
Sbjct: 315 DRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAA 374
Query: 388 RRDATEVNHEDFNE 401
R+D + V +DF++
Sbjct: 375 RKDKSFVEMKDFDD 388
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 544 (196.6 bits), Expect = 4.5e-52, P = 4.5e-52
Identities = 121/299 (40%), Positives = 181/299 (60%)
Query: 101 RKGKCVVLKTSYPSV-VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+KG +++ + SV +V+ D P D V+ D+ + + P + D K E+
Sbjct: 151 KKGDLFLVRGGFMSVEFKVVEVD---PDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIG-- 205
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
Y+DIGG +KQ+ ++ E I LP+ H F+ LGV+PP+GVLLYGPPG+GKT +ARA
Sbjct: 206 ----YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAV 261
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR +
Sbjct: 262 ANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKT 319
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
+G+ E +R + +LL +DG S ++ VIAATNR + +DPAL R GR DR+I++ P +
Sbjct: 320 NGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN 378
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
R IL+IH++ M + PDV EELA +T F GA L +C EA + +R ++ ED
Sbjct: 379 GRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED 437
Score = 482 (174.7 bits), Expect = 3.2e-45, P = 3.2e-45
Identities = 104/261 (39%), Positives = 157/261 (60%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P ++DIGGL++ L E I+ P+ H ++F+K G+ P +GVL YGPPG GKTL+
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A++ +A F+ + GP+L+ M+ G+ VR+ F A+ +PC++F DE+D+IGT+R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
S G R M +LL ++DG + I ATNR ++LD AL+R GRLD+ I +P
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 395
P AR IL RK V +V + LA+ T F+GA L +C A A+R DA ++
Sbjct: 651 PDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR-DA--ID 707
Query: 396 HEDFNE-GIIQVQAKKKASLN 415
E+ N+ +++ KK+ N
Sbjct: 708 AEEMNKKSKLELSNKKENEQN 728
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 544 (196.6 bits), Expect = 4.5e-52, P = 4.5e-52
Identities = 121/299 (40%), Positives = 181/299 (60%)
Query: 101 RKGKCVVLKTSYPSV-VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK 159
+KG +++ + SV +V+ D P D V+ D+ + + P + D K E+
Sbjct: 151 KKGDLFLVRGGFMSVEFKVVEVD---PDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIG-- 205
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
Y+DIGG +KQ+ ++ E I LP+ H F+ LGV+PP+GVLLYGPPG+GKT +ARA
Sbjct: 206 ----YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAV 261
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR +
Sbjct: 262 ANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKT 319
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
+G+ E +R + +LL +DG S ++ VIAATNR + +DPAL R GR DR+I++ P +
Sbjct: 320 NGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN 378
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
R IL+IH++ M + PDV EELA +T F GA L +C EA + +R ++ ED
Sbjct: 379 GRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLED 437
Score = 482 (174.7 bits), Expect = 3.2e-45, P = 3.2e-45
Identities = 104/261 (39%), Positives = 157/261 (60%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P ++DIGGL++ L E I+ P+ H ++F+K G+ P +GVL YGPPG GKTL+
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A++ +A F+ + GP+L+ M+ G+ VR+ F A+ +PC++F DE+D+IGT+R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
S G R M +LL ++DG + I ATNR ++LD AL+R GRLD+ I +P
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 395
P AR IL RK V +V + LA+ T F+GA L +C A A+R DA ++
Sbjct: 651 PDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR-DA--ID 707
Query: 396 HEDFNE-GIIQVQAKKKASLN 415
E+ N+ +++ KK+ N
Sbjct: 708 AEEMNKKSKLELSNKKENEQN 728
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 111/273 (40%), Positives = 171/273 (62%)
Query: 144 PSEYD-SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGV 202
P ++ S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG
Sbjct: 241 PMDFGRSKSKFQEVPETGVS-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGC 298
Query: 203 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 262
LL GPPGTGKTL+ARA A + F A + V++F+G GA VRD F+ AK K+PCI+
Sbjct: 299 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 358
Query: 263 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 322
FIDEIDA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+
Sbjct: 359 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 418
Query: 323 RSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 382
R GR DR++ + P R +ILQ+HSR + DV+F+++AR T F GA L+ + EA
Sbjct: 419 RPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEA 478
Query: 383 GMLALRRDATEVNHEDFNEGIIQVQA---KKKA 412
+LA RR+ E++ ++ ++ + ++ A KK A
Sbjct: 479 AILAARRELKEISKDEISDALERIIAGPEKKNA 511
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 110/273 (40%), Positives = 171/273 (62%)
Query: 144 PSEYD-SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGV 202
P ++ S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG
Sbjct: 229 PMDFGRSKSKFQEVPETGVT-FGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGC 286
Query: 203 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 262
LL GPPGTGKTL+ARA A + F A + V++F+G GA VRD F+ AK K+PCI+
Sbjct: 287 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 346
Query: 263 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 322
FIDEIDA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+
Sbjct: 347 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 406
Query: 323 RSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 382
R GR DR++ + P R +IL++HSR + DV++E++AR T F GA L+ + EA
Sbjct: 407 RPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEA 466
Query: 383 GMLALRRDATEVNHEDFNEGIIQVQA---KKKA 412
+LA RR+ E++ ++ ++ + ++ A KK A
Sbjct: 467 AILAARRELKEISKDEISDALERIIAGPEKKNA 499
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 502 (181.8 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 105/266 (39%), Positives = 160/266 (60%)
Query: 145 SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLL 204
S + S+ KA++ T + D+ G+++ +E++E + + R++KLG R PKG +L
Sbjct: 336 SLFKSKSKAVKATSTTT--FKDVAGMDEAKEEIMEFVSF-LKDPSRYKKLGARIPKGAIL 392
Query: 205 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 264
GPPGTGKTL+A+A A + F ++G ++MF+G G VRD F+ A+ +PCI+FI
Sbjct: 393 SGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFI 452
Query: 265 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 324
DEIDA+G R D E + T+ +LL ++DGFSS + V A TNR+D+LDPAL+R
Sbjct: 453 DEIDAVGRARSRGGFHND-ERENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRP 511
Query: 325 GRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCV 380
GR DR+I + P + R I +H + + + D EE+A+ T F+GA + VC
Sbjct: 512 GRFDRQIYVGKPDIKGRKDIFMVHLKNIKL--DGEMEEIAKKLATLTPGFSGADIANVCN 569
Query: 381 EAGMLALRRDATEVNHEDFNEGIIQV 406
E ++A R+DAT N + F E I +V
Sbjct: 570 EGALVAARKDATSANFDHFEEAIERV 595
Score = 55 (24.4 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 32 DNEIRVLKEELQRTNLELDSYKEKV---KENQ-EKIKLNKQLPYLVGNIVEILEMNPEDE 87
DNE + E+ T ++ D K V KEN+ EK+K K+ E + N E++
Sbjct: 106 DNEKKFENEK--ETTVKQDKNKNDVENKKENENEKVKDEKEKDEKEKEEKEEEKENKEEK 163
Query: 88 AEEDGANIDLDSQRKG 103
E+ N D + ++KG
Sbjct: 164 ENEE-ENKDKEDKKKG 178
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 107/249 (42%), Positives = 161/249 (64%)
Query: 152 KAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
KA + EK ++D+ G+++ +EL E IV + + ++F +LG + PKG LL GPPGT
Sbjct: 142 KAKMLTEKHGRVTFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGT 200
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEIDA+
Sbjct: 201 GKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAV 260
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
G R G+ E ++T+ +LL ++DGF +++ + ++AATNR D+LDPAL+R GR DR
Sbjct: 261 GRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRN 320
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
+ + +P + R +IL +H+RK + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 VTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVG 380
Query: 391 ATEVNHEDF 399
V EDF
Sbjct: 381 RRFVTMEDF 389
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 107/249 (42%), Positives = 161/249 (64%)
Query: 152 KAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
KA + EK ++D+ G+++ +EL E IV + + ++F +LG + PKG LL GPPGT
Sbjct: 142 KAKMLTEKHGRVTFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGT 200
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ +PCI+FIDEIDA+
Sbjct: 201 GKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAV 260
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
G R G+ E ++T+ +LL ++DGF +++ + ++AATNR D+LDPAL+R GR DR
Sbjct: 261 GRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRN 320
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
+ + +P + R +IL +H+RK + PDV+ +AR T F+GA L + EA ++A R
Sbjct: 321 VTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVG 380
Query: 391 ATEVNHEDF 399
V EDF
Sbjct: 381 RRFVTMEDF 389
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 513 (185.6 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 504 (182.5 bits), Expect = 2.3e-49, Sum P(2) = 2.3e-49
Identities = 100/243 (41%), Positives = 150/243 (61%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R E+
Sbjct: 648 PDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 513 (185.6 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 500 (181.1 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 100/243 (41%), Positives = 149/243 (61%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R E+
Sbjct: 648 PDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 513 (185.6 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 109/273 (39%), Positives = 167/273 (61%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG+ KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 505 (182.8 bits), Expect = 2.3e-49, Sum P(2) = 2.3e-49
Identities = 99/243 (40%), Positives = 150/243 (61%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGL+ +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG SS + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK + DV+ + LA+ T+ F+GA L +C A LA+R E+
Sbjct: 648 PDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 37 (18.1 bits), Expect = 2.8e-50, Sum P(2) = 2.8e-50
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ +R +R++ N +RV
Sbjct: 72 LSDDTCSDEKVRMNRVVRNNLRV 94
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 103/236 (43%), Positives = 156/236 (66%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
++D+ G+++ +EL E IV + ++FQKLG + PKG LL GPPGTGKTL+A+A A +
Sbjct: 156 FHDVAGIDEAKEELAE-IVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 214
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
F ++G V+MF+G GA VRD F+ K+ +PC+IFIDEIDA+G R G+
Sbjct: 215 KVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGND 274
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E ++T+ +LL ++DGF +++ + +IAATNR D+LDPAL+R GR DR+I + P R +
Sbjct: 275 EREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQK 334
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
IL++H +K+ P+V +AR T F+GA L + E+ ++A RR+ V +EDF
Sbjct: 335 ILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDF 390
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 493 (178.6 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 96/176 (54%), Positives = 127/176 (72%)
Query: 123 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIV 182
K+ P V + DSY + LP++ D V M V++ P Y IGGL+KQI+E+ E I
Sbjct: 88 KVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIE 147
Query: 183 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 242
LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ FIG+
Sbjct: 148 LPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGE 207
Query: 243 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 298
GA++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDG
Sbjct: 208 GARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 263
Score = 47 (21.6 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 9 SNIEDDQLSSMTTDDIIRASRLLDNE----IRVLKEELQRTNLELDSYKEKVKENQEKIK 64
S IE+ QL +R + NE +R+L+EELQ E SY +V +K K
Sbjct: 26 SKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ-EQGSYVGEVVRAMDKKK 84
Query: 65 L 65
+
Sbjct: 85 V 85
Score = 41 (19.5 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 9/42 (21%), Positives = 23/42 (54%)
Query: 40 EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
+ L+R + + KV+ +E+++L ++ VG +V ++
Sbjct: 40 QNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMD 81
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 511 (184.9 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 509 (184.2 bits), Expect = 6.4e-50, Sum P(2) = 6.4e-50
Identities = 101/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 511 (184.9 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 509 (184.2 bits), Expect = 6.4e-50, Sum P(2) = 6.4e-50
Identities = 101/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 511 (184.9 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 509 (184.2 bits), Expect = 6.4e-50, Sum P(2) = 6.4e-50
Identities = 101/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 511 (184.9 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 509 (184.2 bits), Expect = 6.4e-50, Sum P(2) = 6.4e-50
Identities = 101/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 511 (184.9 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 509 (184.2 bits), Expect = 6.4e-50, Sum P(2) = 6.4e-50
Identities = 101/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 511 (184.9 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 506 (183.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 100/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL + + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 395 NHE 397
E
Sbjct: 708 RRE 710
Score = 38 (18.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 511 (184.9 bits), Expect = 3.9e-50, Sum P(2) = 3.9e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 285 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 341
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 342 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 402 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 498 (180.4 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 101/245 (41%), Positives = 151/245 (61%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 336 PSEEARARILQIHSRKMTVHP--DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-T 392
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +
Sbjct: 648 PDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 707
Query: 393 EVNHE 397
E+ E
Sbjct: 708 EIRRE 712
Score = 38 (18.4 bits), Expect = 3.9e-50, Sum P(2) = 3.9e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 511 (184.9 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 109/273 (39%), Positives = 166/273 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 181 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 240
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 241 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 300
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDE+DAI KR + G+ E +R + +LL +DG +
Sbjct: 301 NLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHV 357
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 358 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 417
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 418 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 450
Score = 509 (184.2 bits), Expect = 8.2e-50, Sum P(2) = 8.2e-50
Identities = 101/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 484 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 543
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 544 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 603
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 604 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 664 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 723
Query: 395 NHE 397
E
Sbjct: 724 RRE 726
Score = 38 (18.4 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 88 LSDDTCSDEKIRMNRVVRNNLRV 110
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 108/260 (41%), Positives = 157/260 (60%)
Query: 158 EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 217
E P +NDIGG E+ E+ +A++ P H E F++ G+ PP G+LLYGPPG KTL+AR
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIAR 511
Query: 218 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 277
A A++ FL + GP+L ++GD K +RD F A++ +P I+F DEIDA+G+ R
Sbjct: 512 ALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSE 571
Query: 278 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPS 337
+ SG + R + +LL +LDG R+ ++AATNR D LD AL+R GRLDR I + P
Sbjct: 572 KSSGVSD--RVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPC 629
Query: 338 EEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEV 394
E R IL++ ++KM V ++L T ++GA+L AVC A M A+R DAT V
Sbjct: 630 EVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRESIDATIV 689
Query: 395 NHEDFNEGIIQVQAKKKASL 414
F + + V ++ +A L
Sbjct: 690 QWTHFEQALAAVVSRTEAYL 709
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 106/234 (45%), Positives = 152/234 (64%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
++D+ G+E EL E IV + ++FQ++G + PKGVLL GPPGTGKTL+ARA A +
Sbjct: 174 FDDVAGMENPKMELKE-IVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEA 232
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
+ TFL ++ Q ++MF+G GA VRD F AK+ +P IIFIDE+DA+G R G
Sbjct: 233 DVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHD 292
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E ++T+ +LL+++DGF S D + V+AATNR D+LDPAL+R GR DR + + P R +
Sbjct: 293 EREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREK 352
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 397
IL +H+RK+ + DV+ +AR T GA L+ + EA +LA R +A V E
Sbjct: 353 ILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTME 406
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 508 (183.9 bits), Expect = 7.5e-50, Sum P(2) = 7.5e-50
Identities = 115/275 (41%), Positives = 168/275 (61%)
Query: 128 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTH 187
D +GV D++ L S S ++ V E P + DIGGLE+ +EL E + +P+ +
Sbjct: 463 DSLGVTMDNFRF--ALGSSNPSALRETVV-EVPNVRWEDIGGLEEVKRELRETVQMPVMY 519
Query: 188 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 247
E+F + GV P KGVL +GPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ V
Sbjct: 520 AEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNV 579
Query: 248 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREV-QRTMLELLNQLDGFSSDDRIK 306
RD F A+ +PC++F+DE+D+I R S +GD R + +LL ++DG +S +
Sbjct: 580 RDIFDKARAAAPCVVFLDELDSIAKARGAS--AGDSGGGDRVVNQLLTEMDGVNSKKNVF 637
Query: 307 VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS 366
VI ATNR D +DPALMR GRLD+ I +P P EEAR ILQ R V DV+ +A++
Sbjct: 638 VIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKA 697
Query: 367 TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 401
T F+GA L+ V A LA++ D+ E + + NE
Sbjct: 698 THGFSGADLEFVVQRAVKLAIK-DSIEEDIKRENE 731
Score = 507 (183.5 bits), Expect = 9.7e-50, Sum P(2) = 9.7e-50
Identities = 111/308 (36%), Positives = 184/308 (59%)
Query: 101 RKGKCVVLKTSYPSV-VGLVDPDKLKPGDLVGVNKDSYLILDTLP-SEYDSRVKAMEVDE 158
RKG V++ S V +VD + P + V++D+ + + P + D EV
Sbjct: 167 RKGDLFVVRGSMRQVEFKVVD---VAPDEFGIVSQDTIIHWEGEPINREDEESSLAEVG- 222
Query: 159 KPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARA 218
Y+DIGG +Q+ ++ E + LP+ H + F+ +G++PP+G+L+YGPPGTGKTLMARA
Sbjct: 223 -----YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARA 277
Query: 219 CAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE 278
A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR +
Sbjct: 278 VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EK 335
Query: 279 VSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSE 338
+G+ E +R + +LL +DG + + V+AATNR + +DPAL R GR DR++++ P
Sbjct: 336 TNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDP 394
Query: 339 EARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNH 396
R IL+IH++ M + DV+ E++A T + G+ L ++C EA M +R D +++
Sbjct: 395 TGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE 454
Query: 397 EDFNEGII 404
++ + ++
Sbjct: 455 DEIDAEVL 462
Score = 39 (18.8 bits), Expect = 7.5e-50, Sum P(2) = 7.5e-50
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 3 TAMVEDSNIEDDQLSSMTT----DDIIRASRLLDNEIRVLKEELQRTNLELD-SYKEKV 56
T +V+ +D L +T D + R +R++ N +RV ++ N D Y E++
Sbjct: 76 TVVVKGKRRKDTVLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERI 134
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 102/245 (41%), Positives = 157/245 (64%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
++D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A +
Sbjct: 219 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 277
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+G +R G+
Sbjct: 278 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 337
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E ++T+ +LL ++DGF + + V+AATNRADILD AL+R GR DR++ + P + R
Sbjct: 338 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 397
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 403
IL++HS V+ E +A T F+GA L + EA +LA RR T ++ ++ ++ I
Sbjct: 398 ILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSI 457
Query: 404 IQVQA 408
++ A
Sbjct: 458 DRIVA 462
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 102/265 (38%), Positives = 164/265 (61%)
Query: 144 PSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVL 203
P ++ +++ ++D+ G+++ Q+ +E + + ERF +G + PKGVL
Sbjct: 206 PLQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVL 264
Query: 204 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIF 263
L GPPGTGKTL+A+A A + F ++G + V+MF+G GA VRD F+ AKE +PCI+F
Sbjct: 265 LIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 324
Query: 264 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 323
+DEIDA+G +R G+ E ++T+ +LL ++DGF + + V+AATNRADILD AL+R
Sbjct: 325 VDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLR 384
Query: 324 SGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAG 383
GR DR++ + P + R IL++H+ DV+ E +A T F+GA L + EA
Sbjct: 385 PGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAA 444
Query: 384 MLALRRDATEVNHEDFNEGIIQVQA 408
+LA RR T ++ ++ ++ I ++ A
Sbjct: 445 ILAGRRARTSISSKEIDDSIDRIVA 469
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 519 (187.8 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 109/258 (42%), Positives = 157/258 (60%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
SR K + D P + D+ G+++ ++EL E I + + R+Q LG + PKGVLLYGPP
Sbjct: 148 SRAKQLSKD-MPKTTFADVAGVDEAVEELYE-IKDFLQNPSRYQALGAKIPKGVLLYGPP 205
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+ARA A + F ++G V+MF+G GA VRD F+ AK+ SPCIIF+DEID
Sbjct: 206 GTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEID 265
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ +LL ++DGF + +IAATNR DILDPAL+R GR D
Sbjct: 266 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFD 325
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R+I + +P R +L++HS+ + D + + LA+ T GA L V EA +L R
Sbjct: 326 RQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTAR 385
Query: 389 RDATEVNHEDFNEGIIQV 406
+ T + E + +V
Sbjct: 386 ENGTVITGPALEEAVDRV 403
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 506 (183.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 100/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 466 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 525
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 585
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 586 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 646 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 705
Query: 395 NHE 397
E
Sbjct: 706 RRE 708
Score = 428 (155.7 bits), Expect = 7.6e-41, Sum P(2) = 7.6e-41
Identities = 97/273 (35%), Positives = 148/273 (54%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+G
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
R A D + + EV +R + +LL +DG +
Sbjct: 285 ACRKKISPAPPPLKTAGIFKSDDCFPSPQTHGEVE-----RRIVSQLLTLMDGLKQRAHV 339
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A
Sbjct: 340 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 399
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
T GA L A+C EA + A+R+ ++ ED
Sbjct: 400 ETHGHVGADLAALCSEAALQAIRKKMDLIDLED 432
Score = 38 (18.4 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 122/365 (33%), Positives = 206/365 (56%)
Query: 50 DSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLK 109
D E+ K K+ + L +G+++ + + P+ + + + +D +G L
Sbjct: 78 DETCEEPKIRMNKV-VRSNLRVRLGDVISVHQC-PDVKYGKRVHILPVDDTVEGVTGNLF 135
Query: 110 TSYPSVVGLVDPDKLKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAME 155
+Y L ++ GDL G+ + +++T P+EY D+ +
Sbjct: 136 DAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKR 195
Query: 156 VDEKPTED--YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 213
DE+ +D Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKT
Sbjct: 196 EDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 255
Query: 214 LMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTK 273
L+ARA A +T A F + GP+++ G+ +R AF+ A++ +P IIFIDEID+I K
Sbjct: 256 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 315
Query: 274 RFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEL 333
R + +G+ E +R + +LL +DG S + V+ ATNR + +DPAL R GR DR+I++
Sbjct: 316 R--EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI 372
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 393
P E R +L+IH++ M + DV+ E +++ T + GA L A+C EA + +R
Sbjct: 373 GVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDV 432
Query: 394 VNHED 398
++ ED
Sbjct: 433 IDLED 437
Score = 498 (180.4 bits), Expect = 5.0e-47, P = 5.0e-47
Identities = 98/236 (41%), Positives = 146/236 (61%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P +NDIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+R
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 276 D-SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELP 334
S G R + +LL ++DG ++ + +I ATNR DI+D AL+R GRLD+ I +P
Sbjct: 591 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 650
Query: 335 HPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
P E++R I + RK + DV+ LA+ T F+GA + +C A A+R +
Sbjct: 651 LPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN 706
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 506 (183.2 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 100/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 472 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 531
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 591
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 592 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 652 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 711
Query: 395 NHE 397
E
Sbjct: 712 RRE 714
Score = 499 (180.7 bits), Expect = 9.4e-49, Sum P(2) = 9.4e-49
Identities = 108/275 (39%), Positives = 166/275 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V + Y I+ DT+ +K + +E E Y+DIGG KQ+ ++ E + LP+
Sbjct: 165 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 224
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 225 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 284
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKR-FDS-EVSGDREVQRTMLELLNQLDGFSSDD 303
+R AF+ ++ +P IIFIDE+DAI + F S + G+ E +R + +LL +DG
Sbjct: 285 NLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHGEVE-RRIVSQLLTLMDGLKQRA 343
Query: 304 RIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEEL 363
+ V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++
Sbjct: 344 HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQV 403
Query: 364 ARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
A T GA L A+C EA + A+R+ ++ ED
Sbjct: 404 ANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 438
Score = 38 (18.4 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 16 LSSMT-TDDIIRASRLLDNEIRV 37
LS T +D+ IR +R++ N +RV
Sbjct: 72 LSDDTCSDEKIRMNRVVRNNLRV 94
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 109/226 (48%), Positives = 148/226 (65%)
Query: 89 EEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDK------LKPGDLVGVNKDSYLILDT 142
+E G+ + + K VL +P +VD DK + P V + DSY +
Sbjct: 18 QEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKI 77
Query: 143 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGV 202
LP++ D V M V++ P Y IGGL+KQI+E+ E I LP+ H E F+ LG+ PKGV
Sbjct: 78 LPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGV 137
Query: 203 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 262
LLYGPPGTGKTL+ARA A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P II
Sbjct: 138 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSII 197
Query: 263 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
F+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKV+
Sbjct: 198 FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVM 243
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 518 (187.4 bits), Expect = 2.7e-49, P = 2.7e-49
Identities = 101/261 (38%), Positives = 165/261 (63%)
Query: 158 EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 217
E P ++DIGG + + +AI P+ H ++FQ+LG++PP+G+L++GPPG KT++A+
Sbjct: 528 ECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAK 587
Query: 218 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF-- 275
A A ++ FL + GP+L M++G+ + VR+ F+ A++ +P I+F DEIDAIG +R
Sbjct: 588 ALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEG 647
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
D SG +R + +LL +LDG + + ++AATNR D++D AL+R GR+DR + +
Sbjct: 648 DGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGL 707
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATE 393
P EAR IL+I R M + DV+ E+L + T+ ++GA+++AVC EA + AL + +A +
Sbjct: 708 PQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAED 767
Query: 394 VNHEDFNEGIIQVQAKKKASL 414
V DF + V + L
Sbjct: 768 VKWTDFEHALKAVPPRTSPEL 788
Score = 224 (83.9 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 72/246 (29%), Positives = 130/246 (52%)
Query: 167 IGGLEKQIQELIEAIVLPMTHKERFQKL--GVRPPKGVLLYGPPGTGKTLMARA-CA--- 220
IGGL++Q+Q L+E M + F+ L G+R +G+LLYG G GK+++ A CA
Sbjct: 274 IGGLDRQLQ-LVEE---SMEYALGFRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAE 329
Query: 221 --AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEK--SPCIIFIDEIDAIGTKRFD 276
+Q + +++ ++ F+G+ + + F+ A P ++ I+++ + K+ +
Sbjct: 330 ERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQEN 389
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIK-----VIAATNRADILDPALMRSGRLDRKI 331
S++ V+R L L+ LD SS ++K V+A +++ D L P++ R+GRLD ++
Sbjct: 390 SDL-----VKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEV 444
Query: 332 ELPHPSEEARARILQIHSRKMTVH-PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
EL PS +AR I++ + + D E +A T + GA L A V A ML + +
Sbjct: 445 ELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADL-ANLVYAAMLQAQPN 503
Query: 391 ATEVNH 396
++ H
Sbjct: 504 PLQMPH 509
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 517 (187.1 bits), Expect = 4.0e-49, P = 4.0e-49
Identities = 121/365 (33%), Positives = 206/365 (56%)
Query: 50 DSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLK 109
D E+ K K+ + L +G+++ + + P+ + + + +D +G L
Sbjct: 78 DETCEEPKIRMNKV-VRSNLRVRLGDVISVHQC-PDVKYGKRVHILPVDDTVEGVTGNLF 135
Query: 110 TSYPSVVGLVDPDKLKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAME 155
+Y L ++ GDL G+ + +++T P+EY D+ +
Sbjct: 136 DAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKR 195
Query: 156 VDEKPTED--YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 213
DE+ ++ Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKT
Sbjct: 196 EDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 255
Query: 214 LMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTK 273
L+ARA A +T A F + GP+++ G+ +R AF+ A++ +P IIFIDEID+I K
Sbjct: 256 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 315
Query: 274 RFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEL 333
R + +G+ E +R + +LL +DG S + V+ ATNR + +DPAL R GR DR+I++
Sbjct: 316 R--EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI 372
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 393
P E R +L+IH++ M + DV+ E +++ T + GA L A+C EA + +R
Sbjct: 373 GVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDV 432
Query: 394 VNHED 398
++ ED
Sbjct: 433 IDLED 437
Score = 498 (180.4 bits), Expect = 5.0e-47, P = 5.0e-47
Identities = 97/235 (41%), Positives = 145/235 (61%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+R
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+S R + +LL ++DG ++ + +I ATNR DI+D AL+R GRLD+ I +P
Sbjct: 591 NSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL 650
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
P E++R I + RK V DV+ LA+ T F+GA + +C A A+R +
Sbjct: 651 PDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIREN 705
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 491 (177.9 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 102/257 (39%), Positives = 158/257 (61%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
+ D+ G+ + QE++E + + + E+++KLG + P+G +L GPPGTGKTL+A+A A +
Sbjct: 372 FKDVAGMAEAKQEVMEFVKF-LQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
F ++G + V+MF+G GA VRD F+ A+E +P I+F+DEIDAIG +R +G
Sbjct: 431 GVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGAN 490
Query: 284 EVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARA 342
+ + T L +LL ++DGF + D + V+A TNR DILD ALMR GR DR + + +P R
Sbjct: 491 DERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRK 550
Query: 343 RILQIHSRKMTVHPDVNFE---ELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
I +H +K+T+ D++ + LA T F+GA + VC EA ++A R +A V F
Sbjct: 551 EIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHF 610
Query: 400 NEGIIQV--QAKKKASL 414
I +V +KK+ L
Sbjct: 611 ELAIERVIGGVEKKSKL 627
Score = 52 (23.4 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 15 QLSSMTTDDIIRASRL---LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPY 71
+L+ +TTD+I++ R+ L N+ L +EL+ E+ +K+ E K+ ++ Y
Sbjct: 43 ELAELTTDEILQTVRIYYELSNQHLYL-DELEFNKPEV----QKLFETYNKLDNTEEPDY 97
Query: 72 LVGNIVEILEMNPE 85
I L +NP+
Sbjct: 98 --NKIANDLGLNPQ 109
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 517 (187.1 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 129/424 (30%), Positives = 231/424 (54%)
Query: 5 MVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVL-KEELQRTNLEL-DSYKEKVKENQEK 62
+V+++ +D+ + S+ D + + + I + K+ + L D ++ K K
Sbjct: 32 VVDEAINDDNSVVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALADETCDEPKIRMNK 91
Query: 63 IKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPD 122
+ + L +G+++ + + P+ + + LD +G + +Y L
Sbjct: 92 V-VRSNLRVRLGDVISVHQC-PDVKYGNRVHILPLDDTIEGVSGNIFDAYLKPYFLEAYR 149
Query: 123 KLKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YND 166
++ GDL G+ + +++T P+EY D+ + DE+ ++ Y+D
Sbjct: 150 PVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLDEVGYDD 209
Query: 167 IGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNAT 226
+GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKTL+ARA A +T A
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
Query: 227 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQ 286
F + GP+++ G+ +R AF+ A++ +P IIFIDEID+I KR + G+ E +
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-R 326
Query: 287 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ 346
R + +LL +DG S + V+ ATNR + +DPAL R GR DR+I++ P E R +L+
Sbjct: 327 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 386
Query: 347 IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGII 404
IH++ M + DV+ E +++ T + GA L A+C EA + +R D +++ E+ + I+
Sbjct: 387 IHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEIL 446
Query: 405 QVQA 408
A
Sbjct: 447 NSMA 450
Score = 507 (183.5 bits), Expect = 5.3e-48, P = 5.3e-48
Identities = 98/235 (41%), Positives = 147/235 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+R
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+S R + +LL ++DG ++ + +I ATNR DI+DPAL+R GRLD+ I +P
Sbjct: 592 NSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 651
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
P EE+R +I + RK V DV+ LA+ T F+GA + +C + A+R +
Sbjct: 652 PDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN 706
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 517 (187.1 bits), Expect = 4.5e-49, P = 4.5e-49
Identities = 101/243 (41%), Positives = 157/243 (64%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
Y+DIGG +KQ+ ++ E + LP+ H + F+ +G++PPKG+L+YGPPGTGKT+MARA A +T
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR + +G+
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTNGEV 331
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E +R + +LL +DG + + VIAATNR + +DPAL R GR DR++++ P E R
Sbjct: 332 E-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLE 390
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNE 401
IL+IH++ M + DV+ E +A T F GA + ++C EA M +R D ++ E +
Sbjct: 391 ILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDT 450
Query: 402 GII 404
++
Sbjct: 451 EVL 453
Score = 474 (171.9 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 98/264 (37%), Positives = 155/264 (58%)
Query: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
+GV +D++ L + S ++ V E ++DIGGL+ EL E + P+ H +
Sbjct: 456 LGVTQDNFRF--ALGNSNPSALRETVV-ENVNVTWDDIGGLDNIKNELKETVEYPVLHPD 512
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
++QK G+ P KGVL +GPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ +RD
Sbjct: 513 QYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRD 572
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
F A+ +P ++F+DE+D+I R S R + +LL ++DG ++ + VI
Sbjct: 573 IFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIG 632
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATNR D +DPAL+R GRLD+ I +P P E AR ILQ R + P ++ E+A+ T
Sbjct: 633 ATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHG 692
Query: 370 FNGAQLKAVCVEAGMLALRRDATE 393
F+GA L + + A++ D+ E
Sbjct: 693 FSGADLSYIVQRSAKFAIK-DSIE 715
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 517 (187.1 bits), Expect = 4.5e-49, P = 4.5e-49
Identities = 101/243 (41%), Positives = 157/243 (64%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
Y+DIGG +KQ+ ++ E + LP+ H + F+ +G++PPKG+L+YGPPGTGKT+MARA A +T
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR + +G+
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTNGEV 331
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E +R + +LL +DG + + VIAATNR + +DPAL R GR DR++++ P E R
Sbjct: 332 E-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLE 390
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNE 401
IL+IH++ M + DV+ E +A T F GA + ++C EA M +R D ++ E +
Sbjct: 391 ILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDT 450
Query: 402 GII 404
++
Sbjct: 451 EVL 453
Score = 474 (171.9 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 98/264 (37%), Positives = 155/264 (58%)
Query: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
+GV +D++ L + S ++ V E ++DIGGL+ EL E + P+ H +
Sbjct: 456 LGVTQDNFRF--ALGNSNPSALRETVV-ENVNVTWDDIGGLDNIKNELKETVEYPVLHPD 512
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
++QK G+ P KGVL +GPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ +RD
Sbjct: 513 QYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRD 572
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
F A+ +P ++F+DE+D+I R S R + +LL ++DG ++ + VI
Sbjct: 573 IFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIG 632
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATNR D +DPAL+R GRLD+ I +P P E AR ILQ R + P ++ E+A+ T
Sbjct: 633 ATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHG 692
Query: 370 FNGAQLKAVCVEAGMLALRRDATE 393
F+GA L + + A++ D+ E
Sbjct: 693 FSGADLSYIVQRSAKFAIK-DSIE 715
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 518 (187.4 bits), Expect = 5.4e-49, P = 5.4e-49
Identities = 111/281 (39%), Positives = 164/281 (58%)
Query: 141 DTLPSEYDSRVKAM-EVD-EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
D L D R AM EV + P ++DIGGLE +L +A+ P+ H E F ++G++P
Sbjct: 601 DFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQP 660
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
PKGVLLYGPPG KT++A+A A ++ FL + GP+L+ ++G+ + VR+ F+ A+ S
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVS 720
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
P IIF DE+DA+ +R S +G+ R + +LL ++DG + ++AATNR D +D
Sbjct: 721 PSIIFFDELDALAIERGSSSGAGN-VADRVLAQLLTEMDGIEQLKDVTILAATNRPDRID 779
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
ALMR GR+DR I +P P R IL + M + DVN +EL TD ++GA++ AV
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAV 839
Query: 379 CVEAGMLALRRD--ATEVNHEDFNEGIIQVQAKKKASLNYY 417
C EA +LAL D A + F + V + SL +
Sbjct: 840 CREAALLALEEDIQANSITRRHFTRALSTVTPRISKSLRRF 880
Score = 439 (159.6 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 109/291 (37%), Positives = 161/291 (55%)
Query: 108 LKTSYPSVVG----LVDPDKLKPGDLVGV--NKDS-YLILDTLPSEYDS-RVKAMEVDEK 159
LK S+ S G L++ ++L VG N D Y I T + + E D +
Sbjct: 288 LKCSFESARGGNEQLINEERLLKSACVGAKCNTDIFYFISSTTRINFIKVHTNSEEEDNQ 347
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
Y+ IGGL Q++ + E I LP+ E F+ G+ PP+GVLLYGPPGTGKT++ARA
Sbjct: 348 FKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAV 407
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A + A + GP+++ F G+ +R F A + P IIFIDE+DA+ KR ++
Sbjct: 408 ANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQN 467
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
++ V ++L L++ + S+ ++ V+ ATNR LD AL R GR D++IE+ P+
Sbjct: 468 EVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAA 527
Query: 340 ARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
R ILQ + R + +V +LA S + GA LKA+C EAG+ ALRR
Sbjct: 528 DRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRR 578
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 105/253 (41%), Positives = 161/253 (63%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+ + + D+ T + D+ G ++ +E+ E +V + RFQKLG + PKGVL+ GPP
Sbjct: 137 SKARMLTEDQIKTT-FADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR D
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +IL++H R++ + PD++ +AR T F+GA L + EA + A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 389 RDATEVNHEDFNE 401
+ V+ +F +
Sbjct: 375 GNKRVVSMVEFEK 387
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 514 (186.0 bits), Expect = 7.8e-49, P = 7.8e-49
Identities = 107/266 (40%), Positives = 165/266 (62%)
Query: 145 SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLL 204
SE ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 287 SETTAKVLRDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAIL 341
Query: 205 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 264
GPPGTGKTL+A+A A + N F+ + G + ++MF+G G VRD F LA++ +PCI+FI
Sbjct: 342 TGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFI 401
Query: 265 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 324
DEIDA+G KR G E + T+ +LL ++DGF++ + V+A TNR DILDPALMR
Sbjct: 402 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRP 461
Query: 325 GRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCV 380
GR DR+I + P + RA I ++H R + + +++ E LAR T F+GA + VC
Sbjct: 462 GRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCN 521
Query: 381 EAGMLALRRDATEVNHEDFNEGIIQV 406
EA ++A R + +N + F + I +V
Sbjct: 522 EAALIAARHLSDAINQKHFEQAIERV 547
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 100/243 (41%), Positives = 151/243 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G+ P KGVL YGPPG GKTL+
Sbjct: 200 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 259
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I R
Sbjct: 260 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 319
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 320 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P E++R IL+ + RK V DV+ + LA+ T+ F+GA L +C A LA+R +E+
Sbjct: 380 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 439
Query: 395 NHE 397
E
Sbjct: 440 RRE 442
Score = 302 (111.4 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 64/168 (38%), Positives = 101/168 (60%)
Query: 231 AGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTML 290
+GP+++ G+ +R AF+ A++ +P IIFIDE+DAI KR + G+ E +R +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVS 58
Query: 291 ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSR 350
+LL +DG + V+AATNR + +DPAL R GR DR++++ P R ILQIH++
Sbjct: 59 QLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK 118
Query: 351 KMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 398
M + DV+ E++ T GA L A+C EA + A+R+ ++ ED
Sbjct: 119 NMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED 166
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 511 (184.9 bits), Expect = 2.0e-48, P = 2.0e-48
Identities = 100/243 (41%), Positives = 157/243 (64%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
Y+DIGG KQ+ ++ E + LP+ H + F+ +G++PP+GVLLYGPPGTGKTLMARA A +T
Sbjct: 221 YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANET 280
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR + +G+
Sbjct: 281 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEV 338
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E +R + +LL +DG + + V+AATNR + +DPAL R GR DR++++ P R
Sbjct: 339 E-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLE 397
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNE 401
ILQIH++ M + DV+ E++A T + G+ + A+C EA M +R D +++ + +
Sbjct: 398 ILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDA 457
Query: 402 GII 404
++
Sbjct: 458 EVL 460
Score = 483 (175.1 bits), Expect = 2.4e-45, P = 2.4e-45
Identities = 103/269 (38%), Positives = 155/269 (57%)
Query: 128 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTH 187
D +GV +++ L S ++ + V E P + DIGGL++ Q+L E + P+ H
Sbjct: 461 DSLGVTMENFRF--ALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDH 518
Query: 188 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 247
E+F K G+ P +GVL YGPPGTGKT++A+A A + A F+ + GP+L+ M+ G+ +
Sbjct: 519 PEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNI 578
Query: 248 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 307
RD F A+ +PCI+F+DE+D+I R S R + +LL ++DG +S + V
Sbjct: 579 RDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFV 638
Query: 308 IAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARST 367
I ATNR + LDPAL R GRLD I +P P E R IL+ RK V DV+ + +A T
Sbjct: 639 IGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKT 698
Query: 368 DDFNGAQLKAVCVEAGMLALRRDAT-EVN 395
F+GA L + A +A++ T ++N
Sbjct: 699 HGFSGADLGFITQRAVKIAIKESITADIN 727
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 510 (184.6 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 105/265 (39%), Positives = 164/265 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 294 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 348
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVE 381
R DR+I + P + RA I ++H R + + + E+LAR T F+GA + VC E
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 382 AGMLALRRDATEVNHEDFNEGIIQV 406
A ++A R + +N + F + I +V
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERV 553
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 106/251 (42%), Positives = 158/251 (62%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+ + M D+ T ++D+ G + + +E ++ +V + RFQKLG + P GVL+ GPP
Sbjct: 141 SKARMMSEDQIKTT-FSDVAGCD-EAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPP 198
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ SPCIIFIDEID
Sbjct: 199 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR D
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +IL++H RK+ + DV +AR T F+GA L + EA + A R
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAAR 378
Query: 389 RDATEVNHEDF 399
+ V+ +F
Sbjct: 379 GNKRNVSMVEF 389
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 106/251 (42%), Positives = 158/251 (62%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+ + M D+ T ++D+ G + + +E ++ +V + RFQKLG + P GVL+ GPP
Sbjct: 141 SKARMMSEDQIKTT-FSDVAGCD-EAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPP 198
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ SPCIIFIDEID
Sbjct: 199 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR D
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +IL++H RK+ + DV +AR T F+GA L + EA + A R
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAAR 378
Query: 389 RDATEVNHEDF 399
+ V+ +F
Sbjct: 379 GNKRNVSMVEF 389
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 509 (184.2 bits), Expect = 3.0e-48, P = 3.0e-48
Identities = 105/265 (39%), Positives = 164/265 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 294 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 348
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 349 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 408
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 409 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 468
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVE 381
R DR+I + P + RA I ++H R + + + E+LAR T F+GA + VC E
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNE 528
Query: 382 AGMLALRRDATEVNHEDFNEGIIQV 406
A ++A R + +N + F + I +V
Sbjct: 529 AALIAARHLSDSINQKHFEQAIERV 553
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 107/251 (42%), Positives = 157/251 (62%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+ K M D+ T + D+ G ++ +E+ E +V + +FQKLG R P GVL+ GPP
Sbjct: 142 SKAKLMSEDQIKTT-FADVAGCDEAKEEVKE-LVDYLRDPTKFQKLGGRIPTGVLMVGPP 199
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+A+A A ++ F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEID
Sbjct: 200 GTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEID 259
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LD AL+R GR D
Sbjct: 260 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFD 319
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R++ + P R +IL++H RK+ + DV +AR T F+GA L + EA + A R
Sbjct: 320 RQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAAR 379
Query: 389 RDATEVNHEDF 399
+ V E+F
Sbjct: 380 GNRRVVGMEEF 390
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 509 (184.2 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 104/281 (37%), Positives = 171/281 (60%)
Query: 129 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPM 185
+V V + Y ++ DT+ + + + E Y+DIGG KQ+ ++ E + LP+
Sbjct: 175 VVDVEPEEYAVVAQDTIIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPL 234
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
H + F+ +G++PP+GVL+YGPPGTGKTLMARA A +T A F + GP+++ G+
Sbjct: 235 RHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESES 294
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
+R AF+ A++ +P IIFIDEID+I KR + +G+ E +R + +LL +DG + +
Sbjct: 295 NLRKAFEEAEKNAPAIIFIDEIDSIAPKR--DKTNGEVE-RRVVSQLLTLMDGMKARSNV 351
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
VIAATNR + +DPAL R GR DR++++ P R +L+IH++ M + DV+ E LA
Sbjct: 352 VVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAA 411
Query: 366 STDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGII 404
T + GA + ++C EA M +R D +++ ++ + ++
Sbjct: 412 ETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVL 452
Score = 476 (172.6 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 99/282 (35%), Positives = 163/282 (57%)
Query: 128 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTH 187
D +GV D++ L + S ++ V E ++D+GGL++ +EL E + P+ H
Sbjct: 453 DSLGVTMDNFRF--ALGNSNPSALRETVV-ESVNVTWDDVGGLDEIKEELKETVEYPVLH 509
Query: 188 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 247
+++ K G+ P KGVL YGPPGTGKTL+A+A A + +A F+ + GP+L+ M+ G+ +
Sbjct: 510 PDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNI 569
Query: 248 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 307
RD F A+ +P ++F+DE+D+I R S R + +LL ++DG ++ + V
Sbjct: 570 RDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFV 629
Query: 308 IAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARST 367
I ATNR D +DPA++R GRLD+ I +P P E AR IL RK + P + +A++T
Sbjct: 630 IGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKAT 689
Query: 368 DDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 409
F+GA L + A A++ D+ E + + E ++V+ +
Sbjct: 690 QGFSGADLLYIVQRAAKYAIK-DSIEAHRQHEAEKEVKVEGE 730
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 507 (183.5 bits), Expect = 4.9e-48, P = 4.9e-48
Identities = 104/246 (42%), Positives = 156/246 (63%)
Query: 155 EVDEKPTED--YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGK 212
E +E+ D Y+DIGG KQ+ ++ E + LP+ H F+ +GV+PP+G+LLYGPPGTGK
Sbjct: 194 EDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 253
Query: 213 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGT 272
TL+ARA A +T A F + GP+++ G+ +R AF+ A++ +P IIFIDE+DAI
Sbjct: 254 TLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAP 313
Query: 273 KRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE 332
KR + G+ E +R + +LL +DG + V+AATNR + +D AL R GR DR+I+
Sbjct: 314 KR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREID 370
Query: 333 LPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT 392
+ P R ILQIH++ M + DV+ E+++ T GA L A+C EA + A+R+ T
Sbjct: 371 IGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMT 430
Query: 393 EVNHED 398
++ ED
Sbjct: 431 LIDLED 436
Score = 477 (173.0 bits), Expect = 9.9e-45, P = 9.9e-45
Identities = 101/260 (38%), Positives = 158/260 (60%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P ++ DIGGL++ +EL E + P+ + ++F K G+ P +GVL YGPPG GKTL+
Sbjct: 470 VVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLL 529
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VRD F A++ +PCI+F DE+D+I R
Sbjct: 530 AKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARG 589
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 590 GGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 649
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 395
P +R IL+ + RK V DV+ L++ T+ F+GA L +C A LA+R +A E
Sbjct: 650 PDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIR-EAIEA- 707
Query: 396 HEDFNEGIIQVQAKKKASLN 415
E E Q QA+K+ +++
Sbjct: 708 -EIRAER--QRQARKETAMD 724
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 506 (183.2 bits), Expect = 6.1e-48, P = 6.1e-48
Identities = 102/249 (40%), Positives = 155/249 (62%)
Query: 151 VKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 209
+K E +E Y+DIGG KQ+ ++ E + LP+ H F+ +GV+PP+G+L+YGPPG
Sbjct: 186 IKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPG 245
Query: 210 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 269
TGKTL+ARA A +T A F + GP+++ G+ +R AF+ A++ SP IIFIDEIDA
Sbjct: 246 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDA 305
Query: 270 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 329
I KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR
Sbjct: 306 IAPKR--DKTHGEVE-RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDR 362
Query: 330 KIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
+I++ P R +L+IH++ M +H DV+ E++A + GA L ++C EA + +R
Sbjct: 363 EIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIRE 422
Query: 390 DATEVNHED 398
++ ED
Sbjct: 423 KMDLIDLED 431
Score = 481 (174.4 bits), Expect = 3.5e-45, P = 3.5e-45
Identities = 94/243 (38%), Positives = 147/243 (60%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P + DIGGLE +EL E + P+ H ++F K G++P +GVL YGPPG GKTL+
Sbjct: 465 VVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLL 524
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 525 AKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARG 584
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+ R + ++L ++DG + + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 585 GNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 644
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA-TEV 394
P +++R IL+ + RK + +V+ +A+ T F+GA L +C A LA+R+ E+
Sbjct: 645 PDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 704
Query: 395 NHE 397
E
Sbjct: 705 RRE 707
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 508 (183.9 bits), Expect = 6.7e-48, P = 6.7e-48
Identities = 124/358 (34%), Positives = 198/358 (55%)
Query: 64 KLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDK 123
KL +++P+L+ E+L++ GA++ + G C L+ L PD
Sbjct: 535 KLLRRVPHLLTE-AELLQLANSAHGYV-GADLKVLCNEAGLCA-LRRILKKQPNL--PD- 588
Query: 124 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAM-EVD-EKPTEDYNDIGGLEKQIQELIEAI 181
+K LV + + D L + D R AM E+ + P ++DIGGLE +L +A+
Sbjct: 589 VKVAGLVKIT-----LKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAV 643
Query: 182 VLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIG 241
P+ H E F ++G++PPKGVLLYGPPG KT++A+A A ++ FL + GP+L+ ++G
Sbjct: 644 EWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG 703
Query: 242 DGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS 301
+ + VR+ F+ A+ +P IIF DE+DA+ +R S +G+ R + +LL ++DG
Sbjct: 704 ESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGN-VADRVLAQLLTEMDGIEQ 762
Query: 302 DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE 361
+ ++AATNR D +D ALMR GR+DR I +P P R I ++ M V +V+ +
Sbjct: 763 LKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLD 822
Query: 362 ELARSTDDFNGAQLKAVCVEAGMLALRRD--ATEVNHEDFNEGIIQVQAKKKASLNYY 417
EL TD ++GA++ AVC EA +LAL D A + F + + V + SL +
Sbjct: 823 ELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRF 880
Score = 420 (152.9 bits), Expect = 2.2e-38, P = 2.2e-38
Identities = 118/384 (30%), Positives = 198/384 (51%)
Query: 39 KEELQRTNLELDSYKEKVKENQEKIKLNKQLPYL-----VGNIVEILEMNPEDEAEEDGA 93
+ ++ ++LEL ++ +I ++ PY + N + ++ ++ DG+
Sbjct: 221 QSSMETSSLELSLQLSQLDLEDTQIPTSRSTPYKPIDDRITNKASDVLLDVT-QSPGDGS 279
Query: 94 NIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDL-VGVNKDS-YLILDTLP---SEYD 148
+ L+ KC +++ L + ++L + N D+ Y I T +E D
Sbjct: 280 GLMLEEVTGLKCN-FESAREGNEQLTEEERLLKFSIGAKCNTDTFYFISSTTRVNFTEID 338
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
K + K T Y+ IGGL Q++ + E I LP+ E F+ G+ P+GVLLYGPP
Sbjct: 339 KNSKEQDNQFKVT--YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPP 396
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKT++ARA A + A + GP+++ F G+ +R F A + P IIFIDE+D
Sbjct: 397 GTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELD 456
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
A+ KR ++ ++ V ++L L++ + S+ ++ V+ ATNR LD AL R GR D
Sbjct: 457 ALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFD 516
Query: 329 RKIELPHPSEEARARILQIHSRKMT-VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 387
++IE+ P+ + R ILQ R++ + + +LA S + GA LK +C EAG+ AL
Sbjct: 517 KEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCAL 576
Query: 388 RRDAT-EVNHEDFN-EGIIQVQAK 409
RR + N D G++++ K
Sbjct: 577 RRILKKQPNLPDVKVAGLVKITLK 600
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 103/265 (38%), Positives = 163/265 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
E ++V E+D K + D+ G E+ E++E + + + ++++ LG + PKG +L
Sbjct: 137 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILT 191
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+A+A A + N F+ + G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 192 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 251
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 252 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 311
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVE 381
R DR+I + P + RA I ++H R + + ++ + LAR T F+GA + VC E
Sbjct: 312 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 371
Query: 382 AGMLALRRDATEVNHEDFNEGIIQV 406
A ++A R + +N + F + I +V
Sbjct: 372 AALIAARHLSDAINQKHFEQAIERV 396
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 104/266 (39%), Positives = 164/266 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVR-PPKGVLL 204
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + P KG +L
Sbjct: 84 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKKGAIL 138
Query: 205 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 264
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FI
Sbjct: 139 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFI 198
Query: 265 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 324
DEIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R
Sbjct: 199 DEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRP 258
Query: 325 GRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCV 380
GR DR+I + P + RA I ++H R + + + E+LAR T F+GA + VC
Sbjct: 259 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCN 318
Query: 381 EAGMLALRRDATEVNHEDFNEGIIQV 406
EA ++A R + +N + F + I +V
Sbjct: 319 EAALIAARHLSDSINQKHFEQAIERV 344
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 104/252 (41%), Positives = 158/252 (62%)
Query: 149 SRVKAMEVDE-KPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGP 207
S+ + + D+ K T ++D+ G+++ +E+ E + + +FQ+LG + P GVLL GP
Sbjct: 141 SKARLLSQDQVKVT--FDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGP 197
Query: 208 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 267
PGTGKTL+A+A A + F ++G V+MF+G GA VRD F AK+++PCIIFIDEI
Sbjct: 198 PGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEI 257
Query: 268 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 327
DA+G R G E ++T+ +LL ++DGF + I V+AATNR D+LDPAL+R GR
Sbjct: 258 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRF 317
Query: 328 DRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 387
DR++ +P P + R IL++H K+ + DV +AR T F+GA L + EA + A
Sbjct: 318 DRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAA 377
Query: 388 RRDATEVNHEDF 399
R + +V+ +F
Sbjct: 378 RENKKDVSMSEF 389
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 104/250 (41%), Positives = 158/250 (63%)
Query: 152 KAMEVDEKPTED-YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
KA ++ E+ + + D+ G ++ +++ E +V + RFQKLG R P G+LL G PGT
Sbjct: 140 KARQLSEEQIKTTFADVAGCDEAKEDVAE-LVDYLREPSRFQKLGGRIPSGILLVGQPGT 198
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+A+A A + F ++G V+MF+G GA VRD F+ AK+ +PCIIFIDEIDA+
Sbjct: 199 GKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAV 258
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
G +R G E ++T+ ++L ++DGF ++ + VIAATNR D+LDPAL+R GR DR+
Sbjct: 259 GRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQ 318
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
+ + P R +IL++H RK+ + DV E +AR T F+GA L + EA + A R
Sbjct: 319 VTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTA 378
Query: 391 ATEVNHEDFN 400
V+ ++F+
Sbjct: 379 RRVVSMKEFD 388
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 504 (182.5 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 103/265 (38%), Positives = 164/265 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 293 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 347
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R G
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 467
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVE 381
R DR+I + P + RA I ++H R + + + ++LAR T F+GA + VC E
Sbjct: 468 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNE 527
Query: 382 AGMLALRRDATEVNHEDFNEGIIQV 406
A ++A R + +N + F + I +V
Sbjct: 528 AALIAARHLSDSINQKHFEQAIERV 552
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 502 (181.8 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 103/265 (38%), Positives = 164/265 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 292 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 346
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R G
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVE 381
R DR+I + P + RA I ++H R + + + ++LAR T F+GA + VC E
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 382 AGMLALRRDATEVNHEDFNEGIIQV 406
A ++A R + +N + F + I +V
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERV 551
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 502 (181.8 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 103/265 (38%), Positives = 164/265 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
E ++V E+D K + D+ G E+ E++E + + + +++Q LG + PKG +L
Sbjct: 292 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILT 346
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+A+A A + N F+ ++G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 347 GPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 406
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R G
Sbjct: 407 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPG 466
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVE 381
R DR+I + P + RA I ++H R + + + ++LAR T F+GA + VC E
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNE 526
Query: 382 AGMLALRRDATEVNHEDFNEGIIQV 406
A ++A R + +N + F + I +V
Sbjct: 527 AALIAARHLSDAINEKHFEQAIERV 551
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 508 (183.9 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 110/273 (40%), Positives = 169/273 (61%)
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
TL EY R E ++ T Y D+GG++KQ+ ++ E I LP+ + E F +G+ PKG
Sbjct: 506 TLAEEYLKREDYEENNDDIT--YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKG 563
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL++G PGTGKT +A+A A ++NA + GP+++ IG+ + +R F+ A EK+PCI
Sbjct: 564 VLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCI 623
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEID+I KR S+ + + E +R + +LL +DG ++ + V+AATNR + +DPAL
Sbjct: 624 IFIDEIDSIANKR--SKSNNELE-KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPAL 680
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
R GR DR+IE+P P E+ R IL ++KM + PDVN ++A+ + GA L +C E
Sbjct: 681 RRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFE 740
Query: 382 AGMLALRRDA--TEVNHEDFNEGI-IQVQAKKK 411
A + ++ +++ EDF E + I V KK
Sbjct: 741 AAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKK 773
Score = 440 (159.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 89/223 (39%), Positives = 137/223 (61%)
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
PT +NDIGG+ + ++L E I+ P+ +K + K KG+LLYGPPG GKTL+A+A
Sbjct: 929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAI 988
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A + A F+ + GP+L+ M+ G+ VRD F A+ SPCIIF DEID++ +R +S
Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
+ D R + ++L ++DG + I +IAATNR DILD AL R GRLD+ I + P +
Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 382
+R I + + ++ DV+ ++A+ T+ F+GA + +C A
Sbjct: 1107 SRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
Score = 42 (19.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 5 MVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEEL---QRTNLELDSYKEKVKENQE 61
+ E SN +LS + R + LL N+ + ++ ++T+ LD+YK + E
Sbjct: 794 LTESSN----KLSYTNMFPLNRKNTLLQNDKNEMNKDSSYDKKTDA-LDNYKNDSTIDME 848
Query: 62 KIKLNKQLPYLVGN 75
K K K+ + N
Sbjct: 849 KKKNKKKSNFFFSN 862
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 508 (183.9 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 110/273 (40%), Positives = 169/273 (61%)
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
TL EY R E ++ T Y D+GG++KQ+ ++ E I LP+ + E F +G+ PKG
Sbjct: 506 TLAEEYLKREDYEENNDDIT--YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKG 563
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VL++G PGTGKT +A+A A ++NA + GP+++ IG+ + +R F+ A EK+PCI
Sbjct: 564 VLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCI 623
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEID+I KR S+ + + E +R + +LL +DG ++ + V+AATNR + +DPAL
Sbjct: 624 IFIDEIDSIANKR--SKSNNELE-KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPAL 680
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
R GR DR+IE+P P E+ R IL ++KM + PDVN ++A+ + GA L +C E
Sbjct: 681 RRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFE 740
Query: 382 AGMLALRRDA--TEVNHEDFNEGI-IQVQAKKK 411
A + ++ +++ EDF E + I V KK
Sbjct: 741 AAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKK 773
Score = 440 (159.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 89/223 (39%), Positives = 137/223 (61%)
Query: 160 PTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
PT +NDIGG+ + ++L E I+ P+ +K + K KG+LLYGPPG GKTL+A+A
Sbjct: 929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAI 988
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A + A F+ + GP+L+ M+ G+ VRD F A+ SPCIIF DEID++ +R +S
Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047
Query: 280 SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
+ D R + ++L ++DG + I +IAATNR DILD AL R GRLD+ I + P +
Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106
Query: 340 ARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 382
+R I + + ++ DV+ ++A+ T+ F+GA + +C A
Sbjct: 1107 SRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149
Score = 42 (19.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 5 MVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEEL---QRTNLELDSYKEKVKENQE 61
+ E SN +LS + R + LL N+ + ++ ++T+ LD+YK + E
Sbjct: 794 LTESSN----KLSYTNMFPLNRKNTLLQNDKNEMNKDSSYDKKTDA-LDNYKNDSTIDME 848
Query: 62 KIKLNKQLPYLVGN 75
K K K+ + N
Sbjct: 849 KKKNKKKSNFFFSN 862
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 108/269 (40%), Positives = 166/269 (61%)
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
K + EKP ++D+ G+E+ +E+ E IV + + ER+ KLG + PKG+LL GPPGTG
Sbjct: 165 KKLVNSEKPKVKFSDVAGVEEAKEEVKE-IVDFLKYPERYIKLGAKIPKGLLLVGPPGTG 223
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTL+A+A A + + F ++G ++MF+G GA VRD F+ AK+++P I+FIDEIDAIG
Sbjct: 224 KTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIG 283
Query: 272 TKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDR 329
R S + G+ E ++T+ +LL ++DGF ++ + V+AATNR ++LD AL+R GR DR
Sbjct: 284 KSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDR 343
Query: 330 KIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
++ + P + R IL++H + + + P V E++AR T GA L + EA +LA R
Sbjct: 344 QVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRD 403
Query: 390 DATEVNHEDFNEGIIQVQA---KKKASLN 415
V D E + + A KK +N
Sbjct: 404 SKKYVEQNDLVEAVERAIAGLEKKSRRIN 432
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 471 (170.9 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 104/271 (38%), Positives = 159/271 (58%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+ K + + D+ G ++ +E++E + + R++K+G + P+G +L GPP
Sbjct: 332 SKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSF-LKEPSRYEKMGAKIPRGAILSGPP 390
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
GTGKTL+A+A A + F ++G + V+MF+G GA VRD F+ A+E +P I+FIDEID
Sbjct: 391 GTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEID 450
Query: 269 AIGTKRFDSEVSG-DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 327
AIG R SG + E + T+ ++L ++DGF+ D + V+A TNR DILD AL+R GR
Sbjct: 451 AIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRF 510
Query: 328 DRKIELPHPSEEARARILQIHSRKMTVHPDVNFE---ELARSTDDFNGAQLKAVCVEAGM 384
DR I + P E R I +H + + ++ F+ LA T F+GA + VC EA +
Sbjct: 511 DRHINIDKPELEGRKAIFAVHLHHLKLAGEI-FDLKNRLAALTPGFSGADIANVCNEAAL 569
Query: 385 LALR--RDATEVNH-EDFNEGIIQ-VQAKKK 411
+A R DA ++NH E E +I V+ K K
Sbjct: 570 IAARSDEDAVKLNHFEQAIERVIGGVERKSK 600
Score = 55 (24.4 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 29 RLLDNEIRVLKEEL--QRTNLELDSYKEKVKEN-QEKIKLN--KQLPYLVGN 75
R +D IR L++ + Q +N + KEK +EN K K N K+ Y GN
Sbjct: 98 RKIDESIRRLEDAVLKQESNRIQEERKEKEEENGPSKAKSNRTKEQGYFEGN 149
Score = 48 (22.0 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 35 IRVLKEELQRTN-LELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGA 93
I+ L + + N L+ + K ++N E KLNK++P VE + E E+
Sbjct: 29 IKSLHTQYRLLNRLQENKSGNKNEDNNEDAKLNKEIP--TDEEVEAIRKQVEKYIEQTKN 86
Query: 94 N 94
N
Sbjct: 87 N 87
Score = 41 (19.5 bits), Expect = 7.8e-46, Sum P(2) = 7.8e-46
Identities = 7/26 (26%), Positives = 20/26 (76%)
Query: 49 LDSYKEKVKENQEKIKLNK--QLPYL 72
+DS++ K+++ Q+++ ++K ++P L
Sbjct: 259 IDSFEHKLQKAQDELDIDKDFRIPVL 284
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 500 (181.1 bits), Expect = 2.9e-47, P = 2.9e-47
Identities = 103/265 (38%), Positives = 163/265 (61%)
Query: 146 EYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLY 205
E ++V E+D K + D+ G E+ E++E + + + ++++ LG + PKG +L
Sbjct: 293 ETTAKVLKDEIDVK----FKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILT 347
Query: 206 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFID 265
GPPGTGKTL+A+A A + N F+ + G + ++MF+G G VRD F LA++ +PCI+FID
Sbjct: 348 GPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFID 407
Query: 266 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 325
EIDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPALMR G
Sbjct: 408 EIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPG 467
Query: 326 RLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVE 381
R DR+I + P + RA I ++H R + + ++ + LAR T F+GA + VC E
Sbjct: 468 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNE 527
Query: 382 AGMLALRRDATEVNHEDFNEGIIQV 406
A ++A R + +N + F + I +V
Sbjct: 528 AALIAARHLSDAINQKHFEQAIERV 552
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 500 (181.1 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 97/243 (39%), Positives = 155/243 (63%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
Y+DIGG KQ+ ++ E + LP+ H + F+ +G++PP+G+L+YGPPGTGKTLMARA A +T
Sbjct: 224 YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 283
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
A F + GP+++ G+ +R AF+ A++ SP IIFIDEID+I KR + +G+
Sbjct: 284 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEV 341
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E +R + +LL +DG + + V+AATNR + +DPAL R GR DR++++ P R
Sbjct: 342 E-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLE 400
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNE 401
IL IH++ M + DV+ E +A T + G+ L ++C EA M +R D +++ + +
Sbjct: 401 ILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDA 460
Query: 402 GII 404
++
Sbjct: 461 EVL 463
Score = 492 (178.3 bits), Expect = 2.5e-46, P = 2.5e-46
Identities = 105/275 (38%), Positives = 160/275 (58%)
Query: 128 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTH 187
D +GV +++ L S ++ + V E P + DIGGLE+ +ELIE++ P+ H
Sbjct: 464 DSLGVTMENFRY--ALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDH 521
Query: 188 KERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 247
E+FQK G+ P +GVL YGPPGTGKT++A+A A + A F+ + GP+L+ M+ G+ +
Sbjct: 522 PEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNI 581
Query: 248 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 307
RD F A+ +PC++F+DE+D+I R S R + +LL ++DG +S + V
Sbjct: 582 RDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFV 641
Query: 308 IAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARST 367
I ATNR + LD AL+R GRLD + +P P + +R IL+ RK V DV+ E +A T
Sbjct: 642 IGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKT 701
Query: 368 DDFNGAQLKAVCVEAGMLALRRD-ATEVNHEDFNE 401
F+GA L V A LA++ + E+ + E
Sbjct: 702 HGFSGADLGFVTQRAVKLAIKESISAEIERQKQRE 736
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 500 (181.1 bits), Expect = 4.8e-47, P = 4.8e-47
Identities = 130/411 (31%), Positives = 223/411 (54%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKE---NQEKIKLNKQLPYLVGNIVE 78
D +R DNEI + Q L+ + K+ +QE + + VG +E
Sbjct: 482 DSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMIASKTHGFVGADIE 541
Query: 79 IL--EMNPE------DEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLV 130
L E + + +E ++ +I+++ + KGK + + +++ L+ KL D++
Sbjct: 542 SLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEEKQEENLQNLLSLI---KLSMNDML 598
Query: 131 GVNKDSYLILDTL-PSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
L L+ + PS R +E+ P + DIGG E Q+L EAI P+ + +
Sbjct: 599 -------LALNQVKPSSM--REVVVEI---PKVFWGDIGGQEHIKQKLKEAIEWPLKYPQ 646
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
F ++G++PPKG+LLYGPPG KTL+A+A A ++ F+ + GP+L+ ++G+ + VRD
Sbjct: 647 SFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRD 706
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
F+ A++ SP I+F DEID + R E SG V+R + +LL ++DG + +I
Sbjct: 707 IFKKARQNSPSILFFDEIDGLAISR-SGEGSG--AVERVVSQLLTEMDGIQPLTNVTIIG 763
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATNR DI+D A++R+GR+DR + + P +AR I IH +K+ D++ +L+ TD
Sbjct: 764 ATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDG 823
Query: 370 FNGAQLKAVCVEAGMLALRRD--ATEVNHEDFNEGIIQVQAK-KKASLNYY 417
++GA++ ++C EA + A++ D A E+N F I V+ + L++Y
Sbjct: 824 YSGAEVTSICREASIAAMKEDINAKEINMSHFISAIGNVKKGITQEMLDFY 874
Score = 305 (112.4 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 88/276 (31%), Positives = 144/276 (52%)
Query: 34 EIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGA 93
E +L + + R + +S+ + N K K+ K + N N D+ + +
Sbjct: 180 ETLILSQIIGRYFIPQNSFTIHLSNNIIKFKILKLSINKIENNSSNNNSNNNDDCDINSL 239
Query: 94 NIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILD-TLPSEYDSRVK 152
+ + S ++ K + S+ + + K+K L+ N S LI + T+ S ++
Sbjct: 240 DFNKLSLKEKKDNIDNEFIKSIFRICESTKIK---LINSNLQSTLICESTINSNNNNNNN 296
Query: 153 AM-EVDEKPTEDYN--DIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPG 209
+ ++D + N IGGL+ Q++++ E I L + + GV+PPKG+LLYGPPG
Sbjct: 297 SNNKIDNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPG 356
Query: 210 TGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDA 269
TGKTL+AR A QTNAT + G ++ F G K ++ F+ A +KSP IIFIDE+DA
Sbjct: 357 TGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDA 416
Query: 270 IGTKRFDSEVSGDREVQRTMLELLNQLDGF-SSDDR 304
+ KR D+ S + E +R + LL +DG S+ D+
Sbjct: 417 LCPKREDN--SSEVE-KRIVGSLLTLMDGVVSTSDQ 449
Score = 146 (56.5 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 297 DGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH- 355
+G D++ VI TNR D +D AL R GR D +IE+ P+++ R +IL I K+
Sbjct: 461 NGNCGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQL 520
Query: 356 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 411
+A T F GA ++++C EA + R E N + F I+ + K K
Sbjct: 521 TSQEIAMIASKTHGFVGADIESLCKEASLKCFNRIKNE-NQKLFQSINIEKEEKGK 575
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 497 (180.0 bits), Expect = 5.7e-47, P = 5.7e-47
Identities = 102/259 (39%), Positives = 154/259 (59%)
Query: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
+ V +D + TL + R +EV PT + DIGGLE +EL E + P+ H E
Sbjct: 443 MSVTQDHFRTALTLSNPSALRETVVEV---PTTTWEDIGGLEGVKRELRETVQYPVEHPE 499
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
+F+K G++P KGVL YGPPG GKTL+A+A A + A F+ + GP+L+ M+ G+ VR+
Sbjct: 500 KFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 559
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
F A++ +PC++F DE+D+I R S+ R + ++L ++DG ++ + +I
Sbjct: 560 LFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIG 619
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATNR DI+DPA++R GRLD+ I +P P +R IL+ K V DV+ E L + T
Sbjct: 620 ATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQG 679
Query: 370 FNGAQLKAVCVEAGMLALR 388
F+GA L +C A LA+R
Sbjct: 680 FSGADLTEICQRACKLAIR 698
Score = 495 (179.3 bits), Expect = 9.5e-47, P = 9.5e-47
Identities = 99/248 (39%), Positives = 153/248 (61%)
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
VK + D Y+DIGG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG
Sbjct: 188 VKREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGC 247
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKT++ARA A +T A F + GP+++ G+ +R AF+ A++ +P IIFIDEID+I
Sbjct: 248 GKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI 307
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
KR + G+ E +R + +LL +DG S + V+ ATNR + +DPAL R GR DR+
Sbjct: 308 APKR--EKTQGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDRE 364
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
I++ P R I++IH++ M + V+ E +A T + GA L A+C E+ + +R
Sbjct: 365 IDITIPDATGRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREK 424
Query: 391 ATEVNHED 398
++ ED
Sbjct: 425 MDVIDLED 432
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 454 (164.9 bits), Expect = 6.4e-47, Sum P(2) = 6.4e-47
Identities = 95/241 (39%), Positives = 146/241 (60%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI-VLPMTHKERFQKLGVRPPKGVLLYGP 207
S+ K + + + D+ G ++ +E++E + L HK ++KLG + P+G +L GP
Sbjct: 271 SKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHK--YEKLGAKIPRGAILSGP 328
Query: 208 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 267
PGTGKTL+A+A A + FL ++G + V+MF+G GA VRD F+ A+E +P IIF+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 268 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 327
DAIG +R + + G+ E + T+ +LL ++DGF + D + V+A TNR DILD AL+R GR
Sbjct: 389 DAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRF 448
Query: 328 DRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE--AGML 385
DR I + P E R +I ++H K+ + + + + D QLK +E AG L
Sbjct: 449 DRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRL 508
Query: 386 A 386
A
Sbjct: 509 A 509
Score = 68 (29.0 bits), Expect = 6.4e-47, Sum P(2) = 6.4e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 363 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA--KKKASL 414
LA T F GA + C E ++A R DA V+ F + I +V A +KK+ +
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRI 561
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 454 (164.9 bits), Expect = 6.4e-47, Sum P(2) = 6.4e-47
Identities = 95/241 (39%), Positives = 146/241 (60%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAI-VLPMTHKERFQKLGVRPPKGVLLYGP 207
S+ K + + + D+ G ++ +E++E + L HK ++KLG + P+G +L GP
Sbjct: 271 SKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHK--YEKLGAKIPRGAILSGP 328
Query: 208 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 267
PGTGKTL+A+A A + FL ++G + V+MF+G GA VRD F+ A+E +P IIF+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 268 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 327
DAIG +R + + G+ E + T+ +LL ++DGF + D + V+A TNR DILD AL+R GR
Sbjct: 389 DAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRF 448
Query: 328 DRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE--AGML 385
DR I + P E R +I ++H K+ + + + + D QLK +E AG L
Sbjct: 449 DRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLAGRL 508
Query: 386 A 386
A
Sbjct: 509 A 509
Score = 68 (29.0 bits), Expect = 6.4e-47, Sum P(2) = 6.4e-47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 363 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA--KKKASL 414
LA T F GA + C E ++A R DA V+ F + I +V A +KK+ +
Sbjct: 508 LAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRI 561
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 498 (180.4 bits), Expect = 6.7e-47, P = 6.7e-47
Identities = 119/289 (41%), Positives = 168/289 (58%)
Query: 123 KLKPGDLVGVNKD--SYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEA 180
KL P DL K L L S SR K + +EK ++D G E +EL E
Sbjct: 272 KLIPCDLGTPTKKIRQPLKRQALGSLGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQE- 330
Query: 181 IVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFI 240
IV + + E FQ G+ PKGVLL+GPPGTGKTL+A+A A + F G V+MF+
Sbjct: 331 IVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFV 390
Query: 241 GDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGD-REVQRTMLELLNQLDGF 299
G A V+D F ++ +P IIFIDEIDAIG+KR ++ G E ++ +L++L ++DGF
Sbjct: 391 GVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGF 450
Query: 300 S-SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDV 358
+ ++ VI ATNR DILDPAL+R GR D+ I + PS++ R IL++H+R +
Sbjct: 451 KVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSED 510
Query: 359 NFEEL----ARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 403
EEL A +T+DF GA+L+ V EAG+L R+D + E+ E +
Sbjct: 511 EKEELLQEVAENTEDFTGAELQNVLNEAGILTARKDLDYIGREELLEAL 559
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 478 (173.3 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 97/251 (38%), Positives = 155/251 (61%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
++DIGGL+ +EL +AI P +KE F+K G+ PPKG++LYGPPG KT + +A A+ +
Sbjct: 569 WDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSS 628
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKR-FDSEVSGD 282
+FL L+G + ++GD + +RD F+ A++ +P I+F DEIDAI +KR SGD
Sbjct: 629 KLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGD 688
Query: 283 REVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARA 342
R + LN++DG + + VI ATNR D++D AL+R GR D+ +E+ P + +R
Sbjct: 689 NAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRL 748
Query: 343 RILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE--VNHEDFN 400
+IL+I ++ + + +VN E++ T+ F+GA L+ +C EA +LRRD V DF
Sbjct: 749 KILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDLLNGFVEMYDFL 808
Query: 401 EGIIQVQAKKK 411
+ ++ + K
Sbjct: 809 NCLSKINNQSK 819
Score = 341 (125.1 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 82/245 (33%), Positives = 138/245 (56%)
Query: 167 IGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNAT 226
IGGL +QI+ L E ++ P+ + F+ L + PPKG+LL GPPGTGKT + R +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 227 FLKLAGPQLVQMFIGDGAKLVRDAFQ------LAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+ + ++ +IG+ + +R+ FQ +AK SP ++FIDEID I R S +
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQN 408
Query: 281 GDREVQRTMLELLNQLDGFSS-DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEE 339
R V + L LDG + + +IAATNR + +D AL R GRLDR+IE+P P+++
Sbjct: 409 ESRVVG----QFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQ 464
Query: 340 ARARILQIHSRKMTVHPDVN--FEELARSTDDFNGAQLKAVCVEAGMLALRR-DATEVNH 396
R IL+++ K+ + P + +++A T + GA ++ +C ++ +A + + + +
Sbjct: 465 QRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQN 524
Query: 397 EDFNE 401
+ NE
Sbjct: 525 NEQNE 529
Score = 43 (20.2 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 47 LELDSYKEKVKENQEKIKLNKQLPYLVGNI 76
+E++ ++E +K N I + L + N+
Sbjct: 538 IEIEDFRESIKNNPASILKGEHLVENISNV 567
Score = 41 (19.5 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 71 YLVGNIVEIL--EMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVV 116
Y+ N IL ++N E++ +E + Q + K YPS V
Sbjct: 109 YIQSNSKLILNQQINDEEQEQEQEQEQEQQEQEQNKKQNKSIKYPSFV 156
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 498 (180.4 bits), Expect = 8.1e-47, P = 8.1e-47
Identities = 102/252 (40%), Positives = 155/252 (61%)
Query: 141 DTLPSEYDSRVKAM-EVD-EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
D L D R AM EV + P ++DIGGLE +L +A+ P+ H + F ++G++P
Sbjct: 601 DFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQP 660
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
PKGVLLYGPPG KT++A+A A ++ FL + GP+L+ ++G+ + VR+ F+ A+ +
Sbjct: 661 PKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVA 720
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
P IIF DE+DA+ +R S +G+ R + +LL ++DG + V+AATNR D +D
Sbjct: 721 PSIIFFDELDALAVERGSSSGAGN-VADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
ALMR GR+DR I +P P R IL + M + +V+ +EL TD ++GA++ AV
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAV 839
Query: 379 CVEAGMLALRRD 390
C EA +LAL +
Sbjct: 840 CKEAALLALEEN 851
Score = 424 (154.3 bits), Expect = 8.3e-39, P = 8.3e-39
Identities = 104/308 (33%), Positives = 165/308 (53%)
Query: 87 EAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDL-VGVNKDSYLILDTLPS 145
++ DG+ + L+ KC + + + + LKP N D++ + +
Sbjct: 272 QSPRDGSGLGLEESTGLKCSFDSSKEGNTQPVSEEKLLKPASAGTKSNTDTFYFISSTTR 331
Query: 146 EYDSRV--KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVL 203
++ + E D + Y+ IGGL Q++ + E I LP+ E F+ G+ P+G+L
Sbjct: 332 INLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLL 391
Query: 204 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIF 263
LYGPPGTGKT++ARA A + A + GP+++ F G+ +R F A + P IIF
Sbjct: 392 LYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIF 451
Query: 264 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 323
IDE+DA+ KR ++ ++ V ++L L++ + S+ R+ V+ ATNR LD AL R
Sbjct: 452 IDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRR 511
Query: 324 SGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFE--ELARSTDDFNGAQLKAVCVE 381
GR D++IE+ P+ + R ILQ R++ H E LA + + GA LKA+C E
Sbjct: 512 PGRFDKEIEIGIPNAQDRLDILQKLLRRVP-HLLTKAELLRLANNAHGYVGADLKALCNE 570
Query: 382 AGMLALRR 389
AG+ ALRR
Sbjct: 571 AGLHALRR 578
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 450 (163.5 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 97/226 (42%), Positives = 139/226 (61%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
+ D+GG + ++E+ + ++ M H E + LGV PP+GVLL+GPPG GKTL+A A A +
Sbjct: 158 FEDVGGNDMTLKEVCKMLI-HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 216
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
+ LK+A P++V G+ + +R+ F+ A +PCIIFIDEIDAI KR + +R
Sbjct: 217 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMER 276
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
+ +L ++ L+ ++ R+ VI ATNR D LDPAL R+GR DR+I L P E +R R
Sbjct: 277 RIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRER 336
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
ILQ RK+ + +F LA T F GA L A+C EA M A+ R
Sbjct: 337 ILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 382
Score = 291 (107.5 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
Identities = 69/207 (33%), Positives = 114/207 (55%)
Query: 76 IVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS--YPSVVGLV-DPDKLKPGDLVGV 132
++++ E ++ ED + + +R G +T ++GL+ D D L + G+
Sbjct: 384 LMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGL 443
Query: 133 NKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQ 192
+ + L S S + V P + DIG LE +EL AI+ P+ + ++F+
Sbjct: 444 CIELNDFIVALSSVQPSAKREGFVTV-PNVTWADIGALEDIREELTMAILAPVRNPDQFK 502
Query: 193 KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQ 252
LG+ P GVLL GPPG GKTL+A+A A ++ F+ + GP+L+ M++G+ + VR FQ
Sbjct: 503 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 562
Query: 253 LAKEKSPCIIFIDEIDAIGTKRFDSEV 279
AK +PC+IF DE+DA+ +R D E+
Sbjct: 563 RAKNSAPCVIFFDEVDALCPRRSDREI 589
Score = 57 (25.1 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 18/76 (23%), Positives = 41/76 (53%)
Query: 9 SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSY-KEKVKENQEKIKL-N 66
+ I+D + SS+ D+ R +L + + KE+LQ + E+++ ++K K + ++ N
Sbjct: 96 TEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISN 155
Query: 67 KQLPYLVGNIVEILEM 82
+ + GN + + E+
Sbjct: 156 VKFEDVGGNDMTLKEV 171
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 494 (179.0 bits), Expect = 2.1e-46, P = 2.1e-46
Identities = 101/247 (40%), Positives = 156/247 (63%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
++D+ G+++ E++E + + ERFQKLG + P+G +L GPPGTGKTL+A+A A ++
Sbjct: 401 FSDVAGMDEAKVEIMEFVSF-LKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGES 459
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
F ++G + V+MF+G G VRD F A++ +PCIIFIDEIDAIG R SG
Sbjct: 460 GVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGN 519
Query: 284 -EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARA 342
E + T+ ++L ++DGF++ D++ V+A TNR D+LD ALMR GR DR I + P+ + R
Sbjct: 520 DERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRK 579
Query: 343 RILQIHSRKMTVHPDVNF--EELARSTDDFNGAQLKAVCV-EAGMLALRRDATEVNHEDF 399
+I ++H +K+ D+++ L+ T F GA + A CV EA ++A R +A V + F
Sbjct: 580 QIFRVHLKKIVTKEDMDYLTGRLSALTPGFAGADI-ANCVNEAALVAARENAESVTMKHF 638
Query: 400 NEGIIQV 406
I +V
Sbjct: 639 ERAIERV 645
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 491 (177.9 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 115/361 (31%), Positives = 201/361 (55%)
Query: 42 LQRTNLELDSYKEKVKENQ-EKI--KLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDL- 97
+Q ++ L K+ + E EK+ L ++ + + +++ ++ + E + D +++
Sbjct: 46 VQERDMSLRRIKKPILEKVVEKVLDTLKAEVEEKLASSQDLVLVDSDMEEQSDSNLMEVK 105
Query: 98 DSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVD 157
D+ K + S P++ + D+ K + S D S+ + E +
Sbjct: 106 DTNVINKSITSLWSSPNLKEIDGEDEKKSVGQESIT-GSAKRKDRRSKTNGSKRQKAEAN 164
Query: 158 EKPTEDYN--DIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
+P D + DIGGL+ I EL+E + +P+ H E +Q G+ PP+GVLL+GPPG GKT++
Sbjct: 165 REPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTML 224
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A A A + F+ ++ P +V G+ K VR+ F+ AK +PC++FIDEIDA+ KR
Sbjct: 225 ANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRE 284
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELP 334
++ +R + L +++L +D + + VI ATNR D LD AL R+GR DR+I L
Sbjct: 285 SAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLT 344
Query: 335 HPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 394
PS++AR +IL+ ++ + + D +F +LA+ T + GA LKA+ AG++A++R E+
Sbjct: 345 VPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEI 404
Query: 395 N 395
+
Sbjct: 405 S 405
Score = 457 (165.9 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 112/314 (35%), Positives = 169/314 (53%)
Query: 80 LEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGL---VDPDKLKPGDLVGVNKDS 136
L++N + E +++ LDS L + S++ PD L P +L +
Sbjct: 410 LDLNSDPRFNELDSDMALDSNDS-----LPLDHSSIIQRYLNAHPDPLSPEELEPLAICP 464
Query: 137 YLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGV 196
++ L S K P +N+IG L+ EL AIV P+ E +Q +G+
Sbjct: 465 QDFIEALAKVQPSS-KREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGI 523
Query: 197 RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKE 256
P GVLL+GPPG GKTL+A+A A ++ A F+ + GP+L+ ++G+ + VR F A+
Sbjct: 524 SAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARA 583
Query: 257 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADI 316
SPC+IF DE+DA+ +R DS V T LL +LDG S + VIAATNR DI
Sbjct: 584 SSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSGVYVIAATNRPDI 640
Query: 317 LDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARST--DDFNGAQ 374
+DPA++R GRLD+ + + P R IL+ +++ +H +VN + L R +F+GA
Sbjct: 641 IDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGAD 700
Query: 375 LKAVCVEAGMLALR 388
L A+ EA + ALR
Sbjct: 701 LAALVREAAVTALR 714
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 473 (171.6 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 103/250 (41%), Positives = 152/250 (60%)
Query: 149 SRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPP 208
S+VK E+ + + D GG ++ ++E+ + +++ M H E +Q+LGV PP+G LL+GPP
Sbjct: 212 SKVKGFELQFSSVK-FEDFGGSDETLEEVCK-LLIHMRHPEVYQRLGVVPPRGFLLHGPP 269
Query: 209 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID 268
G GKTL+A+A A +T LK++ P+LV G+ + +R+ F+ A +PCI+FIDEID
Sbjct: 270 GCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEID 329
Query: 269 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 328
AI KR + +R + +L ++ L+ ++ VI ATNR D LDPAL R+GR D
Sbjct: 330 AITPKRETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFD 389
Query: 329 RKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
R+I L P E AR +IL+ RK+ + D +F LAR T + GA L A+C EA M A+
Sbjct: 390 REICLGIPDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNAVN 449
Query: 389 RDATEVNHED 398
R E ED
Sbjct: 450 RILLEPTTED 459
Score = 423 (154.0 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 102/279 (36%), Positives = 161/279 (57%)
Query: 122 DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEK-------PTEDYNDIGGLEKQI 174
D LK V +++D L L S++ S + ++ K P + D+G L+
Sbjct: 472 DLLKSS--VSLSEDQLAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGALQDVR 529
Query: 175 QELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 234
+EL AI+ P+ + E+F+ LG+ P G+LL GPPG GKTL+A+A A + F+ + GP+
Sbjct: 530 EELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPE 589
Query: 235 LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 294
L+ M++G+ + VR FQ + +PC+IF DEIDA+ +R + E SG V R + +LL
Sbjct: 590 LLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHE-SG-ASV-RVVNQLLT 646
Query: 295 QLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSR---K 351
++DG + ++ ++AATNR DI+DPA++R GRLD+ + + P R IL ++ K
Sbjct: 647 EMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNTITKGGTK 706
Query: 352 MTVHPDVNFEELARST--DDFNGAQLKAVCVEAGMLALR 388
+ DV+ EE+A + F GA L A+ EA + ALR
Sbjct: 707 PQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALR 745
Score = 40 (19.1 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 2 STAMVEDSNIEDDQLSSMTTDDIIRASRLLDN-EIRVLKEELQRTNLELDSYKEKVKEN- 59
S++ ++ S + DD + T D + S L+D E QR + L+ K+ VK+
Sbjct: 134 SSSTIQRS-LSDDWIIDKTGDRG-QESILIDLCEEESSSTTNQRDSSRLEKEKKSVKQKR 191
Query: 60 QEKIKLNK 67
Q+K KL +
Sbjct: 192 QKKNKLEE 199
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 101/245 (41%), Positives = 149/245 (60%)
Query: 158 EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 217
E P ++D+GGL+ ++L +A+ P+ H F K+G+ P +G+LL+GPPG KT +A+
Sbjct: 279 EIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAK 338
Query: 218 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 277
A A A+F L+ +L M++G+G L+R+ FQ A+ SP IIF DE D + KR D
Sbjct: 339 AAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDE 398
Query: 278 EVSGDREV-QRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S V +R + LL ++DG I V+AATNR +D ALMR GR D + +P P
Sbjct: 399 SSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPP 458
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD--ATEV 394
EAR ILQ+H+R MT+ DV+ ++A TD F GA+L+ +C E+G ++LR + AT V
Sbjct: 459 DLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATAV 518
Query: 395 NHEDF 399
+ F
Sbjct: 519 FNRHF 523
Score = 403 (146.9 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/240 (36%), Positives = 145/240 (60%)
Query: 166 DIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNA 225
+IGG E+ +Q L E I+ P + + LG++ P+G+LLYGPPGTGKT + RA + +A
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 226 TFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS----PCIIFIDEIDAIGTKRFDSEVSG 281
+ L+ + + G+ K++R+AF A + P +IFIDEID + +R D+
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQ 141
Query: 282 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEAR 341
D + + L++ SS R+ V+A+TNR D +DPAL R+GR D +E+ P+EE R
Sbjct: 142 DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDR 201
Query: 342 ARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDF 399
+ILQ++++K+ + P V+ + +A S + + GA L+A+C EA + A +R D+ + +DF
Sbjct: 202 LKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDF 261
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 106/248 (42%), Positives = 151/248 (60%)
Query: 158 EKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMAR 217
+ PT ++D+ G++ EL+E IV + ++KLG R P+GVLL GPPGTGKTL+AR
Sbjct: 327 KNPTVGFDDVEGVDSAKDELVE-IVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLAR 385
Query: 218 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS 277
A A + F ++ + V++F+G GA +RD F A++ SP IIFIDE+DA+G KR S
Sbjct: 386 AVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRS 445
Query: 278 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPS 337
+ +R+ +T+ +LL ++DGF SD ++ VIAATNR + LD AL R GR RK+ + P
Sbjct: 446 -FNDERD--QTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPD 502
Query: 338 EEARARILQIHSRKMTVHPDVNF--EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 395
+E R +IL IH R + + D + +A T F GA L + EA +LA RR V
Sbjct: 503 QEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVA 562
Query: 396 HEDFNEGI 403
ED E I
Sbjct: 563 REDIMEAI 570
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 489 (177.2 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 103/259 (39%), Positives = 158/259 (61%)
Query: 141 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPP 199
DT+ +K E +E E Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PP
Sbjct: 184 DTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPP 243
Query: 200 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 259
+G+LL+GPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF ++ SP
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303
Query: 260 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 319
I+FIDEIDAI KR + G+ E +R + +LL +DG + + VIAATNR + +D
Sbjct: 304 AILFIDEIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 320 ALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVC 379
AL R GR DR+I++ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 361 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLC 420
Query: 380 VEAGMLALRRDATEVNHED 398
EA + +R ++ ED
Sbjct: 421 SEAAIQQIREKMELIDLED 439
Score = 484 (175.4 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 95/243 (39%), Positives = 147/243 (60%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
S R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT-EV 394
P E +R +I + RK + D++ LA++T F+GA L +C A LA+R E+
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 395 NHE 397
E
Sbjct: 713 RQE 715
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 489 (177.2 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 103/259 (39%), Positives = 158/259 (61%)
Query: 141 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPP 199
DT+ +K E +E E Y+D+GG+ KQ+ ++ E + LP+ H + F+ +GV+PP
Sbjct: 184 DTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPP 243
Query: 200 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 259
+G+LL+GPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF ++ SP
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303
Query: 260 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 319
I+FIDEIDAI KR + G+ E +R + +LL +DG + + VIAATNR + +D
Sbjct: 304 AILFIDEIDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDG 360
Query: 320 ALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVC 379
AL R GR DR+I++ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 361 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLC 420
Query: 380 VEAGMLALRRDATEVNHED 398
EA + +R ++ ED
Sbjct: 421 SEAAIQQIREKMELIDLED 439
Score = 484 (175.4 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 95/243 (39%), Positives = 147/243 (60%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
S R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I +P
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT-EV 394
P E +R +I + RK + D++ LA++T F+GA L +C A LA+R E+
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 395 NHE 397
E
Sbjct: 713 RQE 715
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 488 (176.8 bits), Expect = 5.1e-46, P = 5.1e-46
Identities = 104/257 (40%), Positives = 163/257 (63%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
+ D+ G E+ E++E + + + ++++ LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 292 FADVAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 350
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSE-VSGD 282
N F+ ++G + ++MF+G G VRD F +A++ SPCI+FIDEIDA+G KR + G
Sbjct: 351 NVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGH 410
Query: 283 REVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEAR 341
E + T+ +LL ++DGF++D+ + VIAATNR DILD AL+R GR DR+I +P P + R
Sbjct: 411 SEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGR 470
Query: 342 ARILQIHSRKMTVHPD--VNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
A I ++H + D V +LA T F+GA + VC EA ++A R E++++ F
Sbjct: 471 ASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAARDANHEISNKHF 530
Query: 400 NEGIIQVQA--KKKASL 414
+ I +V A +KK +
Sbjct: 531 EQAIERVVAGMEKKTQV 547
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 486 (176.1 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 99/259 (38%), Positives = 158/259 (61%)
Query: 141 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPP 199
DT+ +K E +E + Y+D+GG+ KQ+ ++ E + LP+ H + F+ +G++PP
Sbjct: 185 DTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPP 244
Query: 200 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 259
+G+LL+GPPGTGKTL+ARA A +T + F + GP+++ G+ +R AF+ ++ P
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304
Query: 260 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 319
I+FIDEIDAI KR + +G+ E +R + +LL +DG + VIAATNR + +D
Sbjct: 305 AILFIDEIDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDG 361
Query: 320 ALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVC 379
AL R GR DR+I++ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 362 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLC 421
Query: 380 VEAGMLALRRDATEVNHED 398
EA + +R ++ ED
Sbjct: 422 SEAALQQIREKMELIDLED 440
Score = 477 (173.0 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 95/235 (40%), Positives = 146/235 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR- 592
Query: 276 DSEVSGDR--EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEL 333
GD R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I +
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
P P E +R +IL+ RK + D++ LA++T F+GA L +C A LA+R
Sbjct: 653 PLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIR 707
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 486 (176.1 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 99/259 (38%), Positives = 158/259 (61%)
Query: 141 DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPP 199
DT+ +K E +E + Y+D+GG+ KQ+ ++ E + LP+ H + F+ +G++PP
Sbjct: 185 DTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPP 244
Query: 200 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSP 259
+G+LL+GPPGTGKTL+ARA A +T + F + GP+++ G+ +R AF+ ++ P
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304
Query: 260 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDP 319
I+FIDEIDAI KR + +G+ E +R + +LL +DG + VIAATNR + +D
Sbjct: 305 AILFIDEIDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDG 361
Query: 320 ALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVC 379
AL R GR DR+I++ P R IL+IH++ M + DV+ E++A F GA L ++C
Sbjct: 362 ALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLC 421
Query: 380 VEAGMLALRRDATEVNHED 398
EA + +R ++ ED
Sbjct: 422 SEAALQQIREKMELIDLED 440
Score = 477 (173.0 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 95/235 (40%), Positives = 146/235 (62%)
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V E P ++DIGGL+ +EL E + P+ H E++ K G++P +GVL YGPPG GKTL+
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE+D+I R
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR- 592
Query: 276 DSEVSGDR--EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEL 333
GD R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I +
Sbjct: 593 GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 652
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 388
P P E +R +IL+ RK + D++ LA++T F+GA L +C A LA+R
Sbjct: 653 PLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIR 707
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 485 (175.8 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 100/257 (38%), Positives = 154/257 (59%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
+ D+ G E+ E++E + + + +++ LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 327 FKDVAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 385
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
N F+ ++G + ++MF+G G VRD F +A++ +PCI+FIDEIDA+G KR G
Sbjct: 386 NVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHS 445
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E + T+ +LL ++DGF++ + V+AATNR DILD ALMR GR DR+I +P P + RA
Sbjct: 446 EQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRAS 505
Query: 344 ILQIHSRKMTVHPDVN--FEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 401
I ++H + D N ++A T F GA + VC EA ++A R + + F +
Sbjct: 506 IFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQ 565
Query: 402 GIIQVQAKKKASLNYYA 418
I +V A + N A
Sbjct: 566 AIERVIAGMEKKTNVLA 582
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 483 (175.1 bits), Expect = 1.9e-45, P = 1.9e-45
Identities = 97/247 (39%), Positives = 152/247 (61%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
+ D+ G E+ E++E + + + +++Q LG + PKG +L GPPGTGKTL+A+A A +
Sbjct: 299 FADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEA 357
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
N F+ + G + ++MF+G G VRD F +A++ +PCI+FIDEIDAIG KR + G
Sbjct: 358 NVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQS 417
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
E + T+ ++L ++DGF+S + V+A TNR DILDPAL R GR DR+I + P + R+
Sbjct: 418 EQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSS 477
Query: 344 ILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 399
I ++H R + + ++ + L+R T F GA + VC EA ++A R + V F
Sbjct: 478 IFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHF 537
Query: 400 NEGIIQV 406
+ I +V
Sbjct: 538 EQAIERV 544
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 482 (174.7 bits), Expect = 2.0e-45, P = 2.0e-45
Identities = 99/249 (39%), Positives = 154/249 (61%)
Query: 161 TEDYNDIGGL-EKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARAC 219
T ++D+ GL E +++ IE V + + ++F +G + P+G +L GPPGTGKTL+A+A
Sbjct: 298 TVKFSDVAGLGEAKVE--IEEFVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKAT 355
Query: 220 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 279
A + N F +G V+MF+G G VRD F+ A++ +PCI+FIDEIDA+G R
Sbjct: 356 AGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGF 415
Query: 280 SGDR-EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSE 338
SG E + T+ +LL ++DGF + V+AATNR DILD AL+R GR DR+I + +P
Sbjct: 416 SGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDNPDL 475
Query: 339 EARARILQIHSRKMTVHPDVNF-EELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 397
++R I ++H + + +N+ E L++ T F+GA + VC EA ++A RR A + E
Sbjct: 476 KSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHAEIITLE 535
Query: 398 DFNEGIIQV 406
F+ + +V
Sbjct: 536 HFDAAVDRV 544
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 450 (163.5 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 97/226 (42%), Positives = 139/226 (61%)
Query: 164 YNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 223
+ D+GG + ++E+ + ++ M H E + LGV PP+GVLL+GPPG GKTL+A A A +
Sbjct: 147 FEDVGGNDMTLKEVCKMLI-HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGEL 205
Query: 224 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 283
+ LK+A P++V G+ + +R+ F+ A +PCIIFIDEIDAI KR + +R
Sbjct: 206 DLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMER 265
Query: 284 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR 343
+ +L ++ L+ ++ R+ VI ATNR D LDPAL R+GR DR+I L P E +R R
Sbjct: 266 RIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRER 325
Query: 344 ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
ILQ RK+ + +F LA T F GA L A+C EA M A+ R
Sbjct: 326 ILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 371
Score = 450 (163.5 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 120/364 (32%), Positives = 196/364 (53%)
Query: 76 IVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS--YPSVVGLV-DPDKLKPGDLVGV 132
++++ E ++ ED + + +R G +T ++GL+ D D L + G+
Sbjct: 373 LMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGL 432
Query: 133 NKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQ 192
+ + L S S + V P + DIG LE +EL AI+ P+ + ++F+
Sbjct: 433 CIELNDFIVALSSVQPSAKREGFVTV-PNVTWADIGALEDIREELTMAILAPVRNPDQFK 491
Query: 193 KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQ 252
LG+ P GVLL GPPG GKTL+A+A A ++ F+ + GP+L+ M++G+ + VR FQ
Sbjct: 492 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 551
Query: 253 LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATN 312
AK +PC+IF DE+DA+ +R D E R + +LL ++DG + ++ ++AATN
Sbjct: 552 RAKNSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATN 608
Query: 313 RADILDPALMRSGRLDRK--IELPHPSEEARARILQIHSRKMTVHP---DVNFEELARST 367
R DI+DPA++R GRLD+ + LP P++ R IL+ ++ T P DVN E +A
Sbjct: 609 RPDIIDPAILRPGRLDKTLFVGLPPPAD--RLAILKTITKNGTKPPLDADVNLEAIAGDL 666
Query: 368 --DDFNGAQLKAVCVEAGMLALRRDAT-----------EVNHEDFNEGIIQVQAK--KKA 412
D + GA L A+ EA + ALR++ +V+H+ F E +V++ KK
Sbjct: 667 RCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKD 726
Query: 413 SLNY 416
+ Y
Sbjct: 727 QIMY 730
Score = 53 (23.7 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 18/82 (21%), Positives = 44/82 (53%)
Query: 3 TAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSY-KEKVKENQE 61
++M + + +D + SS+ D+ R +L + + KE+LQ + E+++ ++K K
Sbjct: 79 SSMEDYPDPQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGL 138
Query: 62 KIKL-NKQLPYLVGNIVEILEM 82
+ ++ N + + GN + + E+
Sbjct: 139 EFQISNVKFEDVGGNDMTLKEV 160
Score = 45 (20.9 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 39 KEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLD 98
KE T LE + ++ ++ +E + + Y + +E P+ + +D + ++ D
Sbjct: 44 KELKNLTELEDEHLAKRARQGEEDNEYTES--YSDDD--SSMEDYPDPQDSKDSSLLESD 99
Query: 99 SQRKGK 104
+RKGK
Sbjct: 100 MKRKGK 105
WARNING: HSPs involving 492 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 418 418 0.00082 118 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 742
No. of states in DFA: 568 (60 KB)
Total size of DFA: 211 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.76u 0.20s 45.96t Elapsed: 00:00:02
Total cpu time: 45.85u 0.20s 46.05t Elapsed: 00:00:02
Start: Thu May 9 15:18:49 2013 End: Thu May 9 15:18:51 2013
WARNINGS ISSUED: 2