BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039866
(418 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SEI2|PS6AA_ARATH 26S protease regulatory subunit 6A homolog A OS=Arabidopsis
thaliana GN=RPT5A PE=2 SV=1
Length = 424
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/424 (92%), Positives = 408/424 (96%), Gaps = 6/424 (1%)
Query: 1 MSTAMVED-SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKEN 59
M+T MVED S+ E+DQL+SM+T+DI RA+RLLDNEIR+LKE+ QRTNLE DSYKEK+KEN
Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKEN 60
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPS 114
QEKIKLNKQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTS +
Sbjct: 61 QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
Query: 115 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 174
VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180
Query: 175 QELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 234
QEL+EAIVLPMTHKERF+KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240
Query: 235 LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 294
LVQMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
Query: 295 QLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTV 354
QLDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIE PHP+EEARARILQIHSRKM V
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360
Query: 355 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 414
HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL
Sbjct: 361 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 420
Query: 415 NYYA 418
NYYA
Sbjct: 421 NYYA 424
>sp|O23894|PRS6A_BRACM 26S protease regulatory subunit 6A homolog OS=Brassica campestris
GN=TBP1 PE=2 SV=1
Length = 424
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/424 (91%), Positives = 409/424 (96%), Gaps = 6/424 (1%)
Query: 1 MSTAMVED-SNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKEN 59
M+T MVED S+ E+DQL+SM+T+DI+RA+RLL+NEIR+LKE+ QRTNLE DSYKEK+KEN
Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKEN 60
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPS 114
QEKIKLNKQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTS +
Sbjct: 61 QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
Query: 115 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 174
VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180
Query: 175 QELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 234
QEL+EAIVLPMTHKERF+KLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240
Query: 235 LVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 294
LVQMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
Query: 295 QLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTV 354
QLDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIE PHP+EEARARILQIHSRKM V
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360
Query: 355 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 414
HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL
Sbjct: 361 HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 420
Query: 415 NYYA 418
NYYA
Sbjct: 421 NYYA 424
>sp|P54776|PRS6A_SOLLC 26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum
GN=TBP1 PE=2 SV=1
Length = 423
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/423 (92%), Positives = 408/423 (96%), Gaps = 5/423 (1%)
Query: 1 MSTAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQ 60
M+T M EDSN EDDQL +M+T+DIIRASRLLDNEIR++KEELQRTNLELDS+KEK+KENQ
Sbjct: 1 MATPMAEDSNFEDDQLHAMSTEDIIRASRLLDNEIRIIKEELQRTNLELDSFKEKIKENQ 60
Query: 61 EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSV 115
EKIKLNKQLPYLVGNIVEILEMNPE+EAEEDGANIDLDSQRKGKCVVLKTS + V
Sbjct: 61 EKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
Query: 116 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 175
VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDY+DIGGLEKQIQ
Sbjct: 121 VGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQ 180
Query: 176 ELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 235
EL+EAIVLPMTH+ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
Sbjct: 181 ELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
Query: 236 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 295
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
Query: 296 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH 355
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE PHP+EEARARILQIHSRKM V+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVN 360
Query: 356 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 415
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV HEDFNEGIIQVQAKKKASLN
Sbjct: 361 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKASLN 420
Query: 416 YYA 418
YYA
Sbjct: 421 YYA 423
>sp|O04019|PS6AB_ARATH 26S protease regulatory subunit 6A homolog B OS=Arabidopsis
thaliana GN=RPT5B PE=1 SV=3
Length = 423
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/423 (91%), Positives = 403/423 (95%), Gaps = 5/423 (1%)
Query: 1 MSTAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQ 60
M+TAM ED++ E DQL+SMTTDDI RASRLL NEIR+LKEE QRTNL+L+S KEK+KENQ
Sbjct: 1 MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQ 60
Query: 61 EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSV 115
EKIKLNKQLPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTS + V
Sbjct: 61 EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
Query: 116 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 175
VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
Sbjct: 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
Query: 176 ELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 235
EL+EAIVLPMTHKE+F+KLG+RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
Sbjct: 181 ELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240
Query: 236 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 295
VQMFIGDGAKLVRDAF LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
Query: 296 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH 355
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIE PHP+EEAR RILQIHSRKM V+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVN 360
Query: 356 PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 415
DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
Sbjct: 361 ADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
Query: 416 YYA 418
YYA
Sbjct: 421 YYA 423
>sp|P46465|PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp.
japonica GN=TBP1 PE=2 SV=2
Length = 429
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/409 (92%), Positives = 398/409 (97%), Gaps = 5/409 (1%)
Query: 15 QLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVG 74
QL+SM+T+DI+RA+RLLDNE RVLK+ELQRTNLE++SYKEK+KENQEKIKLNKQLPYLVG
Sbjct: 21 QLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVG 80
Query: 75 NIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDL 129
NIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS + V+GLVDP+KLKPGDL
Sbjct: 81 NIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDL 140
Query: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQEL+EAIVLPMTHK+
Sbjct: 141 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKD 200
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
RFQKLG+RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD
Sbjct: 201 RFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 260
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD+RIKVIA
Sbjct: 261 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIA 320
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATNRADILDPALMRSGRLDRKIE PHPSEEARARILQIHSRKM V+PDVNFEELARSTDD
Sbjct: 321 ATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDD 380
Query: 370 FNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
FNGAQLKAVCVEAGMLALRRDATEV HEDFNEGIIQVQAKKK+SLNYYA
Sbjct: 381 FNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA 429
>sp|P17980|PRS6A_HUMAN 26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1
SV=3
Length = 439
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/410 (75%), Positives = 365/410 (89%), Gaps = 6/410 (1%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
+++ M+T++II+ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV
Sbjct: 31 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGD 128
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGD
Sbjct: 91 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HK
Sbjct: 150 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 209
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 210 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 269
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTD 368
AATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR TD
Sbjct: 330 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389
Query: 369 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>sp|O88685|PRS6A_MOUSE 26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=1
SV=2
Length = 442
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/410 (75%), Positives = 365/410 (89%), Gaps = 6/410 (1%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
+++ M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV
Sbjct: 34 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 93
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGD 128
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGD
Sbjct: 94 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 152
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HK
Sbjct: 153 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 212
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 213 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 272
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 273 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 332
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTD 368
AATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR TD
Sbjct: 333 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 392
Query: 369 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 393 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 442
>sp|Q63569|PRS6A_RAT 26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3
PE=2 SV=1
Length = 439
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/410 (75%), Positives = 365/410 (89%), Gaps = 6/410 (1%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
+++ M+T++I++ +RLLD+EI+++K E+ R EL + K+K+KEN EKIK+NK LPYLV
Sbjct: 31 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGD 128
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGD
Sbjct: 91 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HK
Sbjct: 150 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 209
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 210 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 269
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 270 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTD 368
AATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR TD
Sbjct: 330 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389
Query: 369 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
DFNGAQ KAVCVEAGM+ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 390 DFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
>sp|O42586|PR6AB_XENLA 26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-b
PE=2 SV=1
Length = 404
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/405 (75%), Positives = 360/405 (88%), Gaps = 6/405 (1%)
Query: 19 MTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVE 78
M+T++II+ +RLLD+EI+++K E+ R EL + ++K+KEN EKIK+NK LPYLV N++E
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIE 60
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVN 133
+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGDLVGVN
Sbjct: 61 LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119
Query: 134 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQK 193
KDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HKE+F+
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 179
Query: 194 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 253
LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVRDAF L
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSL 239
Query: 254 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 313
AKEK+P IIFIDE+DAIG KRFDSE +GDREVQRTMLELLNQLDGF ++KVIAATNR
Sbjct: 240 AKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNR 299
Query: 314 ADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGA 373
DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR TDDFNGA
Sbjct: 300 VDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGA 359
Query: 374 QLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
Q KAVCVEAG++ALRR ATE+ HED+ EGI++VQAKKKA+L YYA
Sbjct: 360 QCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 404
>sp|Q54PN7|PRS6A_DICDI 26S protease regulatory subunit 6A homolog OS=Dictyostelium
discoideum GN=psmC3 PE=1 SV=1
Length = 421
Score = 594 bits (1531), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/413 (69%), Positives = 344/413 (83%), Gaps = 23/413 (5%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
D++ MT D++ R ++LL+NE +VL+ E +LE+DS ++++KEN +K+++N QLP+LV
Sbjct: 24 DEIFQMTADEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLV 83
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS--------YPSVVGLVDPDKLK 125
N+VEI++M + E + KCVV+K S YP G+VD DKL+
Sbjct: 84 ANVVEIIDMVLDGETQ------------PSKCVVVKASTRQTIFLAYP---GIVDVDKLR 128
Query: 126 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPM 185
PGDLVG+NKDSY+ILDTLP EYDSRVKAME+DEKPTE+Y+DIGGL+KQIQEL+EA+VLPM
Sbjct: 129 PGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPM 188
Query: 186 THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 245
THKERF+ +G++PPKGVL+YGPPGTGKTL+ARACAAQTN+T+LKLAGPQLVQMFIGDGAK
Sbjct: 189 THKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAK 248
Query: 246 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 305
LVRDAF LAKEK P IIFIDE+DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD I
Sbjct: 249 LVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANI 308
Query: 306 KVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELAR 365
KVIAATNR DILDPAL+RSGRLDRKIE P P+EEARA ILQIHSRKM V DVNF+ELAR
Sbjct: 309 KVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELAR 368
Query: 366 STDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
S++DFNGAQLKAVCVEAGM+ALRR TE+ H DF EG ++V AKKK +L YYA
Sbjct: 369 SSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKKKKTLEYYA 421
>sp|P33297|PRS6A_YEAST 26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPT5 PE=1 SV=3
Length = 434
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/416 (68%), Positives = 350/416 (84%), Gaps = 10/416 (2%)
Query: 13 DDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYL 72
D ++ +++T ++ ++LLDNEIR+ + ELQR + E + EK+K+N+EKIK N+QLPYL
Sbjct: 19 DQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYL 78
Query: 73 VGNIVEILEMNP-ED----EAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPD 122
V N+VE+++MN ED E+ G N++LD+ GK V+KTS + +VGLVDPD
Sbjct: 79 VANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPD 138
Query: 123 KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIV 182
KLKP DLVGVNKDSYLILDTLPSE+DSRVKAMEVDEKPTE Y+D+GGL+KQI+EL+EAIV
Sbjct: 139 KLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIV 198
Query: 183 LPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 242
LPM ++F+ +G+R PKG L+YGPPGTGKTL+ARACAAQTNATFLKLA PQLVQM+IG+
Sbjct: 199 LPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGE 258
Query: 243 GAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD 302
GAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE SGDREVQRTMLELLNQLDGFSSD
Sbjct: 259 GAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSD 318
Query: 303 DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEE 362
DR+KV+AATNR D+LDPAL+RSGRLDRKIE P PSE++RA+ILQIHSRKMT D+N++E
Sbjct: 319 DRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQE 378
Query: 363 LARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
LARSTD+FNGAQLKAV VEAGM+ALR + V HEDF EGI +VQA+K S+++YA
Sbjct: 379 LARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFYA 434
>sp|O14126|PRS6A_SCHPO 26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tbp1 PE=3 SV=1
Length = 438
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/402 (69%), Positives = 338/402 (84%), Gaps = 5/402 (1%)
Query: 22 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILE 81
D++ +RLL+N+I+V+K E QR E + EK+KENQEKI NK LPYLVGN+VEIL+
Sbjct: 37 DELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILD 96
Query: 82 MNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGDLVGVNKDS 136
M P++ ++ AN + ++ R GK V+KTS + ++GLV+P++L PGDL+GVNKDS
Sbjct: 97 MQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDS 156
Query: 137 YLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGV 196
YLI+D LPSEYDSRVKAMEVDEKPTE Y+DIGGL KQI+EL EAIVLPM ++F+KLGV
Sbjct: 157 YLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGV 216
Query: 197 RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKE 256
+PPKG L++GPPGTGKTL+ARACAAQ+NATFLKLA PQLVQMFIGDGAKLVRDAF LAKE
Sbjct: 217 KPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKE 276
Query: 257 KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADI 316
KSP IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGFSSDDR+KVIAATNR D
Sbjct: 277 KSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDT 336
Query: 317 LDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLK 376
LDPAL+RSGRLDRK+E P P+EEAR IL+IHSRKM + D+N+EELARSTD++NGA LK
Sbjct: 337 LDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLK 396
Query: 377 AVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
+VCVEAGM+ALR+ T++NHE F +GI++VQ +K +L Y+A
Sbjct: 397 SVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSKTLQYFA 438
>sp|O42587|PR6AA_XENLA 26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-a
PE=2 SV=1
Length = 405
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/392 (71%), Positives = 335/392 (85%), Gaps = 7/392 (1%)
Query: 14 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLV 73
+++ M+T++II+ +RLLD+EI+++K E+ R EL + ++K+KEN EKIK+NK LPYLV
Sbjct: 15 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLV 74
Query: 74 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS-----YPSVVGLVDPDKLKPGD 128
N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTS + V+GLVD +KLKPGD
Sbjct: 75 SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 133
Query: 129 LVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHK 188
LVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQEL+EAIVLPM HK
Sbjct: 134 LVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHK 193
Query: 189 ERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 248
E+F+ LG++PPKGVL+YGPPGTGKTL+ARACAAQT ATFLKLAGPQLVQMFIGDGAKLVR
Sbjct: 194 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVR 253
Query: 249 DAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVI 308
DAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLDGF + ++KVI
Sbjct: 254 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVI 313
Query: 309 AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTD 368
AATNR DILDPAL+RSGRLDRKIE P P+EEARARI+QIHSRKM V PDVN+EELAR
Sbjct: 314 AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPT 373
Query: 369 DFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
K VEAGM+ALRR ATE +FN
Sbjct: 374 ISMALSAKQFGVEAGMIALRRGATEFGL-NFN 404
>sp|Q8SR13|PRS6A_ENCCU 26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPT5 PE=1 SV=1
Length = 401
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/392 (59%), Positives = 300/392 (76%), Gaps = 18/392 (4%)
Query: 29 RLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEA 88
R+L++E R+L+ + ++ + + EN E+I+LNKQLPYLVGN+VE+L+
Sbjct: 26 RMLNSETRILQSRVNTIKHDISTKNASIAENMERIRLNKQLPYLVGNVVEVLD------- 78
Query: 89 EEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYD 148
E ++ ++ +SY + GL+ +L+PGDLV ++KD+ ++ + LP +YD
Sbjct: 79 -EHSGVVNASTR--------MSSYLPITGLIPNSELRPGDLVALHKDTNIVFEKLPPDYD 129
Query: 149 SRVKAM--EVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYG 206
+V M + D KP E Y DIGGLE+QI+EL EAIVL +TH ERF+KL ++PPKGVL+YG
Sbjct: 130 MKVGGMVLKSDAKPDETYEDIGGLERQIEELNEAIVLSLTHPERFEKLNIKPPKGVLMYG 189
Query: 207 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 266
PPGTGKTLMARACA++TNATFLKLAGPQLVQM+IGDGA+LVRDAF LAKE+ P IIFIDE
Sbjct: 190 PPGTGKTLMARACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDE 249
Query: 267 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 326
IDAIG KR DS+ +GDREVQRTMLELLNQLDGFSS + +K+IAATNR DILDPAL+RSGR
Sbjct: 250 IDAIGAKRSDSDQTGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGR 309
Query: 327 LDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 386
LDRKIE P P+ R RILQIH+RKM+V DVNF+ELARST+ FNGAQ KAVCVEAGM A
Sbjct: 310 LDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAA 369
Query: 387 LRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 418
LR++ TE++ DF +GI +V ++KK+ L Y+
Sbjct: 370 LRKEKTEISQNDFMDGIQEVLSRKKSKLLYFT 401
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 349 bits (895), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/378 (48%), Positives = 255/378 (67%), Gaps = 31/378 (8%)
Query: 38 LKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDL 97
L+EEL+R + + EK++ + +++K + P +VG + EIL+
Sbjct: 75 LREELRRKEVMI----EKLRSDLQRMK---KPPLIVGTVEEILD---------------- 111
Query: 98 DSQRKGKCVVLKTSYPSVVGLVDP----DKLKPGDLVGVNKDSYLILDTLPSEYDSRVKA 153
G+ +V ++ P V V P ++L+PG V +N+ S ++D LPSE DSRV A
Sbjct: 112 ----DGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLA 167
Query: 154 MEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 213
MEVDE P Y+DIGGL++QI+E+ E + P+ E F+K+GV PPKGVLLYGPPGTGKT
Sbjct: 168 MEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKT 227
Query: 214 LMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTK 273
L+A+A A +ATF++LA P+LVQ FIG+GA+LVR+ F+LA+EK+P IIFIDEIDAIG +
Sbjct: 228 LLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGAR 287
Query: 274 RFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEL 333
R SGDREVQRT+ +LL ++DGF D IKVIAATNR DILDPAL+R GR DR I++
Sbjct: 288 RMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKI 347
Query: 334 PHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 393
P P EE R I +IH+R M + DV+ ++LA+ T+ +GA +KA+C EAGM+A+R D
Sbjct: 348 PLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDI 407
Query: 394 VNHEDFNEGIIQVQAKKK 411
V +DF + + +V KK+
Sbjct: 408 VTMDDFLKAVDRVMGKKE 425
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 187/406 (46%), Positives = 266/406 (65%), Gaps = 36/406 (8%)
Query: 7 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLK-----EELQRTNLELDSYKEKVKENQE 61
++SN+++D L +++ +R+ + E R+LK +EL+R NL+L E ++ +
Sbjct: 30 DNSNLKNDLLK----EELQEKARIAELESRILKLELEKKELERENLQLMKENEILRRELD 85
Query: 62 KIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPS----VVG 117
++++ P +VG +V D + K VV ++ PS V
Sbjct: 86 RMRVP---PLIVGTVV--------------------DKVGERKVVVKSSTGPSFLVNVSH 122
Query: 118 LVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQEL 177
V+PD L PG V +N+ + ++D LP D R KAMEVDE+P Y DIGGLEKQ+QE+
Sbjct: 123 FVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEI 182
Query: 178 IEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQ 237
E + LP+ H E F+K+G+ PPKG+LLYGPPGTGKTL+A+A A +TNATF+++ G +LV+
Sbjct: 183 REVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVK 242
Query: 238 MFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLD 297
FIG+GA LV+D F+LAKEK+P IIFIDEIDAI KR D+ GDREVQRT+++LL ++D
Sbjct: 243 KFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMD 302
Query: 298 GFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPD 357
GF + +K+I ATNR DILDPA++R GR DR IE+P P E+ R IL+IH+RKM + D
Sbjct: 303 GFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAED 362
Query: 358 VNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 403
VN EE+A+ T+ GA+LKA+C EAGM A+R V +DF + +
Sbjct: 363 VNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAV 408
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/375 (46%), Positives = 248/375 (66%), Gaps = 16/375 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
++++E R L EK +E + K+ + P VGN+ EI++
Sbjct: 72 MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIID--------------- 116
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
D+ V Y S++ VD D+L+PG V +N + ++ L + D V M++
Sbjct: 117 -DNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKL 175
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 176 EKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 235
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDA+GTKR+D
Sbjct: 236 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYD 295
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 296 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI IH+ +MT+ DVN EL + DD +GA +KA+C EAG++ALR +V +
Sbjct: 356 DEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 415
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V +KK
Sbjct: 416 EDFKKSKESVLYRKK 430
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/375 (46%), Positives = 249/375 (66%), Gaps = 16/375 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID--------------- 117
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
D+ V Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 118 -DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/375 (46%), Positives = 249/375 (66%), Gaps = 16/375 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID--------------- 117
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
D+ V Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 118 -DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/375 (46%), Positives = 249/375 (66%), Gaps = 16/375 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID--------------- 117
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
D+ V Y S++ VD D L+PG V +N + ++ L + D V M+V
Sbjct: 118 -DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKV 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNEGIIQVQAKKK 411
EDF + V KK+
Sbjct: 417 EDFKKSKENVLYKKQ 431
>sp|A3CV35|PAN_METMJ Proteasome-activating nucleotidase OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1
Length = 412
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 252/373 (67%), Gaps = 16/373 (4%)
Query: 31 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEE 90
L + R ++ E + + Y+ ++++ + +I+ + P ++G + +++
Sbjct: 35 LREQFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVI---------- 84
Query: 91 DGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 150
D + + + S G +++TS L+DPD LKPG +N+ S I+D LP+ YD++
Sbjct: 85 DNSRVIVRSS-AGPRFLVRTSQ-----LIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQ 138
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
+ ME+ E P E Y +IGGLE QI+E+ EA+ LP+T + F+K+G+ PPKGVLLYGPPGT
Sbjct: 139 IYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGT 198
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARA A QTNA FL++ G +LVQ +IG+GA+LVR+ F LAK+++P IIFIDEIDAI
Sbjct: 199 GKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAI 258
Query: 271 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 330
G R DS SGDREVQRT+++LL ++DGF + +K++AATNR DILD AL+R GR DR
Sbjct: 259 GAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRM 318
Query: 331 IELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 390
IE+P P + R IL+IH++ M + DVN E++R T+ NGA L+A+C+EAGM A+R +
Sbjct: 319 IEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRME 378
Query: 391 ATEVNHEDFNEGI 403
VN EDF + I
Sbjct: 379 RDAVNSEDFMKAI 391
>sp|Q9YAC7|PAN_AERPE Proteasome-activating nucleotidase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=pan
PE=3 SV=1
Length = 409
Score = 341 bits (874), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 251/368 (68%), Gaps = 12/368 (3%)
Query: 46 NLELDSYKEKVKE-NQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGK 104
++E+ K+KV+ +EKI L K+L Y I ++L P EA + L+ +
Sbjct: 22 DVEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLS-PPYIEA------VVLEVIDDNR 74
Query: 105 CVVLKTSYPS----VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
VV ++ P+ V VD LKPG +V +N I+D LP YD VKAMEV+E+P
Sbjct: 75 VVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERP 134
Query: 161 TEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACA 220
+ D+GGLE+QI+E+ EA+VLP+ + F++LG+ PPKGVLL+GPPGTGKTL+A+A A
Sbjct: 135 KVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVA 194
Query: 221 AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS 280
+T ATF+++ G +LV FIG+GA+LVR+ F+LA+EK+P I+FIDEIDAI +KR D S
Sbjct: 195 GETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTS 254
Query: 281 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEA 340
GDREVQRTML+LL +LDGF D +KVIAATNR D++DPA++R GR DR IE+P PS
Sbjct: 255 GDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRG 314
Query: 341 RARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 400
R IL IH+RK + PDV+ E +A+ T+ F+GA LKAV VEAG A+RR + + +D
Sbjct: 315 RLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMI 374
Query: 401 EGIIQVQA 408
+ + +V+A
Sbjct: 375 KAVEKVKA 382
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 341 bits (874), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 170/365 (46%), Positives = 244/365 (66%), Gaps = 16/365 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE R ++ +EK +E + K+ + P VG + EI++
Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID--------------- 117
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
D+ V Y S++ VD D L+PG V +N + ++ L + D V M++
Sbjct: 118 -DNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKL 176
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G++PPKGV+LYGPPGTGKTL+A
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E P I+FIDEIDAIGTKR+D
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYD 296
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
S G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
E+ + RI QIH+ +MT+ DV +EL + DD +GA +KA+C EAG++ALR +V +
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 397 EDFNE 401
EDF +
Sbjct: 417 EDFKK 421
>sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis
thaliana GN=RPT2A PE=2 SV=1
Length = 443
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/375 (46%), Positives = 244/375 (65%), Gaps = 16/375 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L +EK +E++ K+ + P VGN+ E+++ N + G
Sbjct: 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEY- 134
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y ++ VD D+L+PG + ++ ++ L E D V M+V
Sbjct: 135 ---------------YVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKV 179
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYG PGTGKTL+A
Sbjct: 180 EKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLA 239
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D
Sbjct: 240 KAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD 299
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 300 AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
+ R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H
Sbjct: 360 DIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 419
Query: 397 EDFNEGIIQVQAKKK 411
DF + +V KKK
Sbjct: 420 PDFKKAKEKVMFKKK 434
>sp|Q9SL67|PRS4B_ARATH 26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis
thaliana GN=RPT2B PE=2 SV=1
Length = 443
Score = 339 bits (869), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/375 (46%), Positives = 244/375 (65%), Gaps = 16/375 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L +EK +E++ K+ + P VGN+ E+++ N + G
Sbjct: 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEY- 134
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
Y ++ VD D+L+PG + ++ ++ L E D V M+V
Sbjct: 135 ---------------YVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKV 179
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G++PPKGV+LYG PGTGKTL+A
Sbjct: 180 EKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLA 239
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D
Sbjct: 240 KAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD 299
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 300 ANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
+ R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H
Sbjct: 360 DIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 419
Query: 397 EDFNEGIIQVQAKKK 411
DF + +V KKK
Sbjct: 420 VDFKKAKEKVMFKKK 434
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 337 bits (865), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 177/374 (47%), Positives = 250/374 (66%), Gaps = 16/374 (4%)
Query: 36 RVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANI 95
R L++E + E Y+ +V+ + +++ + P LVG + +ILE DG +
Sbjct: 28 RRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILE---------DG-RV 77
Query: 96 DLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAME 155
+ S K VV + Y ++ ++LKPG V +N+ + I++ LP+ D V E
Sbjct: 78 VVKSSTGPKFVVNTSQY------INEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFE 131
Query: 156 VDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLM 215
V+EKP Y DIGGL+ QI+E+ EA+ LP+ E F ++G+ PPKGVLLYGPPGTGKTL+
Sbjct: 132 VEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLL 191
Query: 216 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 275
A+A A QT ATF+++ G + VQ +IG+GA+LVR+ FQLAKEK+P IIFIDE+DAI +R
Sbjct: 192 AKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRT 251
Query: 276 DSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPH 335
+S+ SGDREVQRTM++LL +LDGF +KVI ATNR DILDPA++R GR DR IE+P
Sbjct: 252 NSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPL 311
Query: 336 PSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 395
P+ E R +I +IH+RKM + DV+F+ELAR T+ +GA +KA+C EAGM A+R + +V
Sbjct: 312 PTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVT 371
Query: 396 HEDFNEGIIQVQAK 409
DF + I +V K
Sbjct: 372 MLDFTKAIEKVLKK 385
>sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp.
japonica GN=TBP2 PE=2 SV=2
Length = 448
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/375 (46%), Positives = 244/375 (65%), Gaps = 16/375 (4%)
Query: 37 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 96
+++EE L ++K +E++ K+ + P VG++ EI++
Sbjct: 81 LMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIID--------------- 125
Query: 97 LDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEV 156
+S V Y ++ VD D+L+PG + ++ ++ L E D V M+V
Sbjct: 126 -ESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKV 184
Query: 157 DEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMA 216
++ P E Y DIGGL+ QIQE+ EA+ LP+TH E ++ +G+RPPKGV+LYG PGTGKTL+A
Sbjct: 185 EKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLA 244
Query: 217 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD 276
+A A T+ATFL++ G +L+Q ++GDG KLVR+ F++A E SP I+FIDEIDA+GTKR+D
Sbjct: 245 KAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYD 304
Query: 277 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHP 336
+ G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P
Sbjct: 305 AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 364
Query: 337 SEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNH 396
+ R RI QIH+ KMT+ DVN EE + D+F+GA +KA+C EAG+LALR +V H
Sbjct: 365 DIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 424
Query: 397 EDFNEGIIQVQAKKK 411
DF + +V KKK
Sbjct: 425 ADFKKAKEKVMFKKK 439
>sp|Q2FQ56|PAN_METHJ Proteasome-activating nucleotidase OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=pan PE=3 SV=1
Length = 412
Score = 336 bits (861), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/373 (46%), Positives = 244/373 (65%), Gaps = 24/373 (6%)
Query: 31 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEE 90
L +IR L+ + + + Y+ +V++ + +I+ K P +VG I +I++
Sbjct: 35 LKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIID--------- 85
Query: 91 DGANIDLDSQRKGKCVVLKTSYPS----VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSE 146
G+ VV ++ P V V+P LK G +N+ S I++ LPS
Sbjct: 86 -----------SGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPST 134
Query: 147 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYG 206
YDS+V ME+ + PTE Y DIGGLEKQI E+ EA+ LPMT + F+K+G+ PPKGVLLYG
Sbjct: 135 YDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYG 194
Query: 207 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDE 266
PPGTGKTL+A+A A +T+A FL G +LVQ +IG+GA+LVR+ F LAKEK+P I+FIDE
Sbjct: 195 PPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDE 254
Query: 267 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 326
IDAIG R ++ SGDREVQRT+++LL +DGF +K+I ATNR DILD AL+R GR
Sbjct: 255 IDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGR 314
Query: 327 LDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 386
DR IE+P P E R IL++H+R M + DV+ E+AR T+ NGA+L A+C+EAGM A
Sbjct: 315 FDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFA 374
Query: 387 LRRDATEVNHEDF 399
+R++ +V+ EDF
Sbjct: 375 IRKEHPQVDQEDF 387
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 335 bits (859), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 182/390 (46%), Positives = 252/390 (64%), Gaps = 16/390 (4%)
Query: 31 LDNEIRVLKEELQRTNLELDSYKEKVKENQ-----EKIKLNKQLPYLVGNIVEILEMNPE 85
L E+R+LKEE +T L K+++++ E+ +L++++ L G I E P
Sbjct: 15 LKKEVRMLKEENSKTKRNLMWKIRKLEKDKLLIENERTRLDREVKSLRGEI-ERFRTPPL 73
Query: 86 DEAEEDGANIDLDSQRKGKCVVLKTSYPSVV----GLVDPDKLKPGDLVGVNKDSYLILD 141
A LD R V T+ P V +D +L+PG V +N+ ++ I+D
Sbjct: 74 VIATVTEV---LDDHR---VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVD 127
Query: 142 TLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKG 201
LPSE D V MEV+EKP Y IGGLE+Q++E+ E + LP+ E F+K+G+ PPKG
Sbjct: 128 VLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKG 187
Query: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 261
VLLYGPPGTGKTL+A+A A +TNATF+K+ + V+ +IG+GA+LVR F+LAKEKSP I
Sbjct: 188 VLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSI 247
Query: 262 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
IFIDEIDA+ KR S SGDREVQRT+++LL +LDGF S + ++AATNR DILDPAL
Sbjct: 248 IFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPAL 307
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GR DR IE+P P+E+ R IL+IH+ M + +V+ E LAR TD +GA LKA+C E
Sbjct: 308 LRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTE 367
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAKKK 411
AGM A+R + EV DF + + ++ +K
Sbjct: 368 AGMFAIRDERDEVTMADFMDAVDKIMGVEK 397
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 335 bits (859), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/400 (44%), Positives = 259/400 (64%), Gaps = 32/400 (8%)
Query: 26 RASRLLDNEIRVLKEELQRTNLELDSYK-EKVKENQEKIKLNKQL------PYLVGNIVE 78
R +L + +R LKEE ++ LE S + +KV+ +E KL +L P +VG I++
Sbjct: 30 RVKQLEERNVR-LKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILD 88
Query: 79 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVV----GLVDPDKLKPGDLVGVNK 134
++ AN GK ++ ++ P V ++ ++ PG V +N+
Sbjct: 89 VM------------AN--------GKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQ 128
Query: 135 DSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKL 194
S +++ LP+ D V MEV + P DY IGGLE QI EL E + LP+ E FQK+
Sbjct: 129 QSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKV 188
Query: 195 GVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLA 254
G+ PPKGVLLYGPPGTGKTL+A+A A +T ATF+++ G +LVQ +IG+GA++VR+ F+LA
Sbjct: 189 GIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELA 248
Query: 255 KEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRA 314
KEKSP IIFIDEID+IG KR DS SGDREVQRT+++LL ++DGF ++++AATNR
Sbjct: 249 KEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRP 308
Query: 315 DILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQ 374
DILDPAL+R GR DR I++P P+ EAR +IL+IH+RKM + DV+ ++A TD+ +GA
Sbjct: 309 DILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGAD 368
Query: 375 LKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 414
L A+ +EAGM A+R + V+ DFN + +V ++ S+
Sbjct: 369 LSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVMGERNRSM 408
>sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog OS=Dictyostelium
discoideum GN=psmC1 PE=1 SV=1
Length = 439
Score = 333 bits (854), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/344 (47%), Positives = 228/344 (66%), Gaps = 16/344 (4%)
Query: 70 PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDL 129
P VGN+ EI++ D+ V Y ++ VD KL G
Sbjct: 105 PLTVGNLEEIID----------------DNHAIVSSTVGPEHYVRIMSFVDKSKLYLGAT 148
Query: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKE 189
V +N + ++ + E D V M+V++ PTE Y+DIGGLE Q+QE+ EAI LP+TH E
Sbjct: 149 VLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPE 208
Query: 190 RFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRD 249
++++G++PPKGV+LYG PGTGKTL+A+A A QT+ATFL++ G +L+Q ++GDG KLVR+
Sbjct: 209 LYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 268
Query: 250 AFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIA 309
F++A E +P I+FIDEIDA+GTKR+DS+ G+RE+QRTMLELLNQLDGF + +KVI
Sbjct: 269 LFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIM 328
Query: 310 ATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDD 369
ATNR + LDPAL+R GR+DRKIE P P + + +I +IH+ KM + DVN EE S DD
Sbjct: 329 ATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDD 388
Query: 370 FNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKAS 413
+GA +KA+C E+G+LALR V H DF + +V +K A
Sbjct: 389 LSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTAG 432
>sp|A4G0S4|PAN_METM5 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1
Length = 407
Score = 332 bits (850), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/392 (44%), Positives = 255/392 (65%), Gaps = 33/392 (8%)
Query: 28 SRLLDNEIRVLKEELQ-----RTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEM 82
+++ + E +VL+ EL+ R N+++ E +K +K+++ P ++G I
Sbjct: 25 TQIAELESKVLRLELKNKDISRENVQIKKENEILKRELDKLRIP---PLILGTI------ 75
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVV----GLVDPDKLKPGDLVGVNKDSYL 138
LD + K VV ++ P+ + VDPD + PG V +N+ +
Sbjct: 76 --------------LDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLA 121
Query: 139 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ P
Sbjct: 122 IVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVP 181
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
PKGVLLYGPPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKS
Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKS 241
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
PCIIFIDEIDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILD
Sbjct: 242 PCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILD 301
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
PA++R GR DR IE+ P E+ R IL+IH+ KM + V+ E+A+ ++ GA LKAV
Sbjct: 302 PAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLK-GVDLREVAKIAENMVGADLKAV 360
Query: 379 CVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 410
C EAGM A+R + + +DF E I ++ KK
Sbjct: 361 CTEAGMFAIREEREFIKMDDFREAITKITGKK 392
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 332 bits (850), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/392 (44%), Positives = 256/392 (65%), Gaps = 33/392 (8%)
Query: 28 SRLLDNEIRVLKEELQ-----RTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEM 82
+++ + E +VL+ EL+ R N+++ E +K +K+++ P ++G I
Sbjct: 25 TQIAELESKVLRLELKNKDVTRENVQIKKENEILKRELDKLRIP---PLILGTI------ 75
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVV----GLVDPDKLKPGDLVGVNKDSYL 138
LD + K VV ++ P+ + VDP+ + PG V +N+ +
Sbjct: 76 --------------LDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLA 121
Query: 139 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ P
Sbjct: 122 IVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVP 181
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
PKGVLLYGPPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKS
Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKS 241
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
PCIIFIDEIDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILD
Sbjct: 242 PCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILD 301
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
PA++R GR DR IE+ P E+ R IL+IH+ KM + +V+ E+A+ ++ GA LKAV
Sbjct: 302 PAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLK-NVDLREVAKLAENMVGADLKAV 360
Query: 379 CVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 410
C EAGM A+R + + +DF E I ++ KK
Sbjct: 361 CTEAGMFAIREEREFIKMDDFKEAISKITGKK 392
>sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4 OS=Caenorhabditis
elegans GN=rpt-2 PE=3 SV=1
Length = 443
Score = 331 bits (849), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 221/300 (73%)
Query: 112 YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
Y +++ VD ++L+PG V +N ++ ++ L + D V M++++ P E Y D+GGL+
Sbjct: 135 YVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLD 194
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
+QIQE+ EA+ LP+TH E ++++G+RPPKGV+LYG PGTGKTL+A+A A QT+ATFL++
Sbjct: 195 QQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIV 254
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +L+Q ++GDG K+VR+ F++A+E +P I+FIDEIDA+GTKR+DS G+RE+QRTMLE
Sbjct: 255 GSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLE 314
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
LLNQLDGF S +KV+ ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +
Sbjct: 315 LLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSR 374
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 411
MT+ +VN EE + D+ +GA +KA+C EAG+LALR V EDF + V +KK
Sbjct: 375 MTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKK 434
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 330 bits (847), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/392 (44%), Positives = 255/392 (65%), Gaps = 33/392 (8%)
Query: 28 SRLLDNEIRVLKEELQ-----RTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEM 82
+++ + E +VL+ EL+ R N+++ E +K +K+++ P ++G I
Sbjct: 25 TQIAELESKVLRLELKNKDINRENVQIKKENEILKRELDKLRIP---PLILGTI------ 75
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVV----GLVDPDKLKPGDLVGVNKDSYL 138
LD + K VV ++ P+ + VDP+ + PG V +N+ +
Sbjct: 76 --------------LDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLA 121
Query: 139 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ P
Sbjct: 122 IVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVP 181
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
PKGVLLYGPPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKS
Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKS 241
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
PCIIFIDEIDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILD
Sbjct: 242 PCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILD 301
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
PA++R GR DR IE+ P E+ R IL+IH+ KM + V+ E+A+ ++ GA LKAV
Sbjct: 302 PAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLK-GVDLREVAKIAENMVGADLKAV 360
Query: 379 CVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 410
C EAGM A+R + + +DF E I ++ KK
Sbjct: 361 CTEAGMFAIREEREFIKMDDFREAISKITGKK 392
>sp|A6UQT3|PAN_METVS Proteasome-activating nucleotidase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1
Length = 407
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 260/410 (63%), Gaps = 33/410 (8%)
Query: 13 DDQLSSMTTDDIIRASRLLDNEIRVLKEELQ-----RTNLELDSYKEKVKENQEKIKLNK 67
D Q + M + + L + E +VL+ EL+ R N+++ E +K +K+++
Sbjct: 10 DVQKNEMDLKEFKEKAYLAELESKVLRLELKNKDITRENVQIKKENEILKRELDKLRIP- 68
Query: 68 QLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVV----GLVDPDK 123
P ++G + LD + K VV ++ P+ + V+PD
Sbjct: 69 --PLILGTV--------------------LDRVNERKAVVKSSTGPNFLVNLSQFVEPDD 106
Query: 124 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVL 183
+ PG V +N+ + +++ LP E D R AME++EKP + DIGGL QI+++ E + L
Sbjct: 107 IVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVEL 166
Query: 184 PMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 243
P+ + E F+K+G+ PPKGVLLYGPPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+G
Sbjct: 167 PLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEG 226
Query: 244 AKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDD 303
AKLVRD F+LAKEKSPCIIFIDEIDA+ +KR +S GDREVQRT+++LL ++DGF S
Sbjct: 227 AKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRG 286
Query: 304 RIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEEL 363
+K+IAATNR DILDPA++R GR DR IE+ P E+ R I +IH+ KM + V+ E+
Sbjct: 287 DVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNIK-SVDLREI 345
Query: 364 ARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKAS 413
A+ ++ GA +KAVC EAGM A+R V +DF E +++V KK+ S
Sbjct: 346 AKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKVTGKKEKS 395
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/392 (44%), Positives = 255/392 (65%), Gaps = 33/392 (8%)
Query: 28 SRLLDNEIRVLKEELQ-----RTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEM 82
+++ + E +VL+ EL+ R N+++ E +K +K+++ P ++G I
Sbjct: 25 TQIAELESKVLRLELKNKDISRENVQIKKENEILKRELDKLRIP---PLILGTI------ 75
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVV----GLVDPDKLKPGDLVGVNKDSYL 138
LD + K VV ++ P+ + VDP+ + PG V +N+ +
Sbjct: 76 --------------LDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLA 121
Query: 139 ILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRP 198
I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ P
Sbjct: 122 IVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVP 181
Query: 199 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS 258
PKGVLLYGPPGTGKTL+A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKS
Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKS 241
Query: 259 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 318
PCIIFIDEIDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILD
Sbjct: 242 PCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILD 301
Query: 319 PALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAV 378
PA++R GR DR IE+ P E+ R IL+IH+ KM + V+ E+A+ ++ GA LKAV
Sbjct: 302 PAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLK-GVDLREVAKLAENMVGADLKAV 360
Query: 379 CVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 410
C EAGM A+R + + +DF E I ++ KK
Sbjct: 361 CTEAGMFAIREEREFIKMDDFKEAISKITGKK 392
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/384 (46%), Positives = 245/384 (63%), Gaps = 31/384 (8%)
Query: 36 RVLKEELQRTNLELDSYKEKVKENQEKIKLN----KQLPYLVGNIVEILEMNPEDEAEED 91
R+ + ELQ LE D KE+++ ++++ +Q P GN++E+L +DE
Sbjct: 23 RIRQLELQVRTLEAD--KERLERELSRLRMEMSRLRQPPAFAGNVIEVL----DDE---- 72
Query: 92 GANIDLDSQRKGKCVVLKTSYPSVVGLVDP----DKLKPGDLVGVNKDSYLILDTLPSEY 147
+ +V + P V + P DKLKPG V +++ + I++ LPSE
Sbjct: 73 ------------RAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEK 120
Query: 148 DSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGP 207
D V EV E+P YNDIGGLEKQ+QEL EAI LP+ H E F+++G+ PPKGVLLYGP
Sbjct: 121 DPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGP 180
Query: 208 PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEI 267
PG GKTLMA+A A NATF+++ G +LV+ FIG+GA+LV + F+LAKEK+P IIFIDEI
Sbjct: 181 PGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEI 240
Query: 268 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRL 327
DAIG KR D G+REV RT+++LL ++DGF +KVIAATNR DILDPAL+R GR
Sbjct: 241 DAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRF 300
Query: 328 DRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 387
DR IE+P P + R IL++H+RKM + V+ +A T+ +GA LKA+ EAGM A+
Sbjct: 301 DRLIEVPLPDYQGRLEILKVHTRKMNLK-GVDLRVIAEITEGASGADLKAIATEAGMFAI 359
Query: 388 RRDATEVNHEDFNEGIIQVQAKKK 411
R T V +DF + + +V +K
Sbjct: 360 RDRRTYVTQDDFLKAVDKVIGSEK 383
>sp|D4GUJ7|PAN1_HALVD Proteasome-activating nucleotidase 1 OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=pan1 PE=2 SV=2
Length = 406
Score = 325 bits (833), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/383 (44%), Positives = 245/383 (63%), Gaps = 28/383 (7%)
Query: 30 LLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAE 89
+L+ + ++++L TN E + Y++K++ + K KQ P V + EI +
Sbjct: 33 VLETQNEEMRDKLLDTNAENNKYQQKLERLTHENKKLKQSPLFVATVQEITD-------- 84
Query: 90 EDGANIDLDSQRKGKCVVLKTSYPSVVGLVD-----PDKLKPGDLVGVNKDSYLILDTLP 144
+ V++K + L + ++L+P V VN +S I+ L
Sbjct: 85 --------------EGVIIKQHGNNQEALTEVTDEMREELEPDARVAVN-NSLSIVKRLD 129
Query: 145 SEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLL 204
E D R + M+V+ P Y DIGGLE+Q+QE+ E + +P+ E F ++G+ PP GVLL
Sbjct: 130 KETDVRARVMQVEHSPDVTYEDIGGLEEQMQEVRETVEMPLDRPEMFAEVGIDPPSGVLL 189
Query: 205 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFI 264
YGPPGTGKT++A+A A QTNA+F+K+AG +LV FIG+GAKLVRD F++A+E P +IFI
Sbjct: 190 YGPPGTGKTMLAKAVANQTNASFIKMAGSELVHKFIGEGAKLVRDLFEVARENEPAVIFI 249
Query: 265 DEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRS 324
DEIDAI +KR DS+ SGD EVQRTM++LL ++DGF I++IAATNR D+LDPA++R
Sbjct: 250 DEIDAIASKRTDSKTSGDAEVQRTMMQLLAEMDGFDERGNIRIIAATNRFDMLDPAILRP 309
Query: 325 GRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGM 384
GR DR IE+P P+E+ R I QIH+RKM V DV+F ELA D+ +GA +KAVC EAGM
Sbjct: 310 GRFDRLIEVPKPNEDGREIIFQIHTRKMNVSDDVDFVELAEMADNASGADIKAVCTEAGM 369
Query: 385 LALRRDATEVNHEDFNEGIIQVQ 407
A+R D TE+ +DF + ++Q
Sbjct: 370 FAIRDDRTEIFMQDFVDAWEKIQ 392
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/396 (44%), Positives = 259/396 (65%), Gaps = 25/396 (6%)
Query: 19 MTTDDI-IRASRLLDNEIRVLKEELQRTNLE---LDSYKEKVKENQEKIKLN----KQLP 70
M+ +D+ I+ S D+ I LK+ +++ L+ L++ KE+++ ++++ +Q P
Sbjct: 1 MSIEDVGIKPSEEYDDYIMYLKKRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPP 60
Query: 71 YLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLV 130
G ++E+L+ ED A N G V++ + ++ + LKPG V
Sbjct: 61 AFAGTLIELLD---EDRAIVQNYN--------GPRFVVR-----IAPWIERENLKPGARV 104
Query: 131 GVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKER 190
+++ + I++ LPSE D V EV E+PT YNDIGGL+KQ+QEL EAI LP+ H E
Sbjct: 105 ALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPEL 164
Query: 191 FQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDA 250
F+K+G+ PPKGVLLYGPPG GKTLMA+A A + NATF+++ G +LV+ FIG+GA+LV +
Sbjct: 165 FEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHEL 224
Query: 251 FQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAA 310
F+LAKEK+P IIFIDEIDAIG KR D G+REV RT+++LL ++DGF +K+IAA
Sbjct: 225 FELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAA 284
Query: 311 TNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDF 370
TNR DILDPAL+R GR DR IE+P P+ ++R IL+IH+++M + V+ +A T+
Sbjct: 285 TNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNLK-GVDLRIIAEMTEGA 343
Query: 371 NGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 406
+GA LKA+ +EAGM A+R V EDF + I +V
Sbjct: 344 SGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKV 379
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 241/356 (67%), Gaps = 16/356 (4%)
Query: 52 YKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS 111
Y+ +V++ + + + + P ++G +V++++ AN + G ++++S
Sbjct: 81 YEREVRKLKSESEQLRSPPLIIGTVVDVVD-----------ANRVIVRSSAGPRFLVRSS 129
Query: 112 YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
PSV +PD +KPG +N+ S I++ LPS +D++V ME+ + P E Y DIGGL+
Sbjct: 130 -PSV----NPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLK 184
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
+QI E+ EA+ LP+ E F ++G+ PPKGVLLYGPPGTGKTL+A+A A +TNA F+++
Sbjct: 185 EQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVV 244
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +LVQ +IG+GA+LVR+ F LAK+K+P IIFIDEIDA+G R ++ SGDREVQRT+++
Sbjct: 245 GSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQ 304
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
LL +DGF + +K+I ATNR DILD AL+R GR DR IE+P P EE R IL++H+R
Sbjct: 305 LLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRT 364
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQ 407
+T+ VN E+A T+ NGA L+A+C+EAGM A+R + + EDF I +V+
Sbjct: 365 LTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKVR 420
>sp|B8GGN4|PAN_METPE Proteasome-activating nucleotidase OS=Methanosphaerula palustris
(strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3
SV=1
Length = 412
Score = 322 bits (825), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 237/356 (66%), Gaps = 24/356 (6%)
Query: 52 YKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS 111
Y+ +V++ + +I+ K P ++G + ++++ N + +V ++
Sbjct: 56 YEREVRKFKGEIEQMKSPPLVIGTVTDLIDEN--------------------RVIVRSSA 95
Query: 112 YPS-VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDI 167
P +VG+ ++ +++KPG +N+ S I++ LP+ YD+++ MEV E P+E Y +I
Sbjct: 96 GPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEI 155
Query: 168 GGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATF 227
GGLEKQI E+ EA+ LP+ E F+K+G+ PPKGVLL+GPPGTGKTL+ARA A QT A F
Sbjct: 156 GGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHF 215
Query: 228 LKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQR 287
L++ G +LVQ +IG+GA+LVR+ F+LAK+KSP IIFIDEIDAIG R +S SGDREV R
Sbjct: 216 LRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHR 275
Query: 288 TMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQI 347
T+++LL ++DGFS+ +++I ATNR DILD AL+R GR DR IE+P P E R IL I
Sbjct: 276 TLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNI 335
Query: 348 HSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 403
H M + V+ ++A TD NGA L+++C+EAGM A+R D V EDF + I
Sbjct: 336 HCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSI 391
>sp|Q8PY58|PAN_METMA Proteasome-activating nucleotidase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=pan PE=3 SV=1
Length = 420
Score = 321 bits (823), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 240/355 (67%), Gaps = 16/355 (4%)
Query: 52 YKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS 111
Y+ ++++ Q ++ K P ++G ++++++ + I + S + +V +
Sbjct: 62 YEREIRKLQSELDRMKTSPLIIGTVIDVIKND----------RIIVRSSNGPQFLVNVSQ 111
Query: 112 YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
Y +D KL PG V +N+ + I + +PS + V AMEV E DY+ IGGL+
Sbjct: 112 Y------IDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESVEVDYDQIGGLD 165
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
+QIQEL EA+ LP+T ERF ++G+ PPKGVLLYG PGTGKTL+A+A A +TNATF+++
Sbjct: 166 EQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVV 225
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +LVQ +IGDG+KLVR+ F++A++K+P IIFIDE+D+I +R + DREVQRT+++
Sbjct: 226 GSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQ 285
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
LL ++DGF I++IAATNR D+LDPA++R GR DR + +P P EAR +IL+IH K
Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEK 345
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 406
MT+ D++F++LA++T+ +GA LKA+ EAGM A+RRD V E+F E + +V
Sbjct: 346 MTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400
>sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog OS=Dictyostelium
discoideum GN=psmC4 PE=1 SV=1
Length = 403
Score = 321 bits (822), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 159/395 (40%), Positives = 246/395 (62%), Gaps = 16/395 (4%)
Query: 23 DIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEM 82
D+ + + L++++ + + E + K ++ QE++K + +P L+G ++E+++
Sbjct: 24 DLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDS 83
Query: 83 NPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDT 142
N G+ + CV ++ +D + LKP V + + S ++DT
Sbjct: 84 NTGIVQSTSGSTL---------CV-------RILSTIDRELLKPSASVALQRHSNALVDT 127
Query: 143 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGV 202
LP E DS + + DEKP+E Y+DIGG + Q QE+ EA+ LP+TH ++++G+ PP+GV
Sbjct: 128 LPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGV 187
Query: 203 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 262
LLYGPPGTGKT++A+A A T+A F+++ G + VQ ++G+G +LVRD F+LA+E SP II
Sbjct: 188 LLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAII 247
Query: 263 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALM 322
FIDEIDAI TKRFD++ DREVQR ++ELLNQ+DGF +KVI ATNR D LDPAL+
Sbjct: 248 FIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALL 307
Query: 323 RSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 382
R GRLDRKIE P P + I Q+ + KM + +V+ E+ D +GA+++++C EA
Sbjct: 308 RPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEA 367
Query: 383 GMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 417
GM A+R++ + +DF +G K N+Y
Sbjct: 368 GMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNFY 402
>sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT2 PE=1
SV=3
Length = 437
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 212/299 (70%)
Query: 112 YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
Y S++ VD + L+PG V ++ + I+ L + D V M++D+ PTE Y+DIGGLE
Sbjct: 129 YVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLE 188
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
QIQE+ E++ LP+TH E ++++G++PPKGV+LYG PGTGKTL+A+A A QT+ATFL++
Sbjct: 189 SQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIV 248
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +L+Q ++GDG +L R F++A E +P I+FIDEIDAIGTKR+DS G+RE+QRTMLE
Sbjct: 249 GSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE 308
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
LLNQLDGF +KVI ATN+ + LDPAL+R GR+DRKI +P + +IL IH+ K
Sbjct: 309 LLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSK 368
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 410
M + DVN E L + DD +GA ++A+C EAG+LALR +V EDF + +V K
Sbjct: 369 MNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNK 427
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 318 bits (814), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 172/362 (47%), Positives = 234/362 (64%), Gaps = 16/362 (4%)
Query: 60 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSYPSVVGLV 119
Q++ +LN+++ +L I + +E +N+ + ++ GK VL + P LV
Sbjct: 94 QKRAELNRRVRFLREEISIV---------QEPSSNVGVVVEKMGKMQVLVKTNPDGKYLV 144
Query: 120 ------DPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQ 173
+ D+LK G V + DSY + LP++ D V M V++ P Y IGGL++Q
Sbjct: 145 KVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQ 204
Query: 174 IQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGP 233
I+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T F++++G
Sbjct: 205 IKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGS 264
Query: 234 QLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELL 293
+LVQ +IG+G++LVR+ F +A+E +P IIF+DEID+IG+ R DS D EVQRTMLELL
Sbjct: 265 ELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELL 324
Query: 294 NQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMT 353
NQLDGF S + IKVI ATNR DILDPAL+R+GR+DRKIE P P+E AR IL+IHSRKM
Sbjct: 325 NQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMN 384
Query: 354 VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKAS 413
+ ++ E +A +GA++KAVC EAGM ALR V EDF + +V KK
Sbjct: 385 LTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKV-LKKTGD 443
Query: 414 LN 415
LN
Sbjct: 444 LN 445
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 318 bits (814), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/380 (45%), Positives = 242/380 (63%), Gaps = 23/380 (6%)
Query: 36 RVLKEELQRTNLELDSYKEKVKENQEKIKLN----KQLPYLVGNIVEILEMNPEDEAEED 91
R+ + ELQ LE D KE+++ +++ +Q P G ++E+L+ +D A
Sbjct: 23 RIRQLELQVRTLEAD--KERLERELSRLRTEMSRLRQPPAFAGTVIEVLD---DDRAIVQ 77
Query: 92 GANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
N G V++ + ++ DKLKPG V +++ + I++ LP+E D V
Sbjct: 78 NYN--------GPRFVVR-----IAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSV 124
Query: 152 KAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTG 211
EV EKP Y DIGGLE+Q+ EL EA+ LP+ H E F+K+G+ PPKGVLLYGPPG G
Sbjct: 125 LGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCG 184
Query: 212 KTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIG 271
KTLMA+A A NATF+++ G +LV+ FIG+GA+LV + F++AKEK+P IIFIDEIDAIG
Sbjct: 185 KTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIG 244
Query: 272 TKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI 331
KR D G+REV RT+++LL ++DGF +KVIAATNR DILDPAL+R GR DR I
Sbjct: 245 AKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLI 304
Query: 332 ELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA 391
E+P P R IL++H+RKM + +V+ +A T+ +GA LKA+ EAGM A+R
Sbjct: 305 EVPLPDFRGRLEILKVHTRKMNLR-NVDLSIIADITEGASGADLKAIATEAGMFAIRDRR 363
Query: 392 TEVNHEDFNEGIIQVQAKKK 411
T V EDF + + +V +K
Sbjct: 364 TYVTQEDFLKAVDKVLGAEK 383
>sp|Q8TI88|PAN_METAC Proteasome-activating nucleotidase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=pan
PE=3 SV=2
Length = 421
Score = 317 bits (813), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 238/355 (67%), Gaps = 16/355 (4%)
Query: 52 YKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTS 111
Y+ ++++ Q ++ K P ++G ++++++ + I + S + +V +
Sbjct: 62 YEREIRKLQSELDRMKTSPLIIGTVIDVIKND----------RIIVRSSNGPQFLVNVSQ 111
Query: 112 YPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
Y +D KL PG V +N+ + I + +PS + V AMEV E DY+ IGGL+
Sbjct: 112 Y------IDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLD 165
Query: 172 KQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 231
+QIQEL EA+ LP+ ERF ++G+ PPKGVLLYG PGTGKTL+A+A A +TNATF+++
Sbjct: 166 EQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVV 225
Query: 232 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 291
G +LVQ +IGDG+KLVR+ F++A++K+P IIFIDE+D+I +R + DREVQRT+++
Sbjct: 226 GSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQ 285
Query: 292 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK 351
LL ++DGF I++IAATNR D+LDPA++R GR DR + +P P EAR +IL+IH K
Sbjct: 286 LLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGK 345
Query: 352 MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 406
MT+ D++F++LA+ T+ +GA LKA+ EAGM A+R+D V EDF E + +V
Sbjct: 346 MTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 317 bits (813), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 225/328 (68%), Gaps = 7/328 (2%)
Query: 89 EEDGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDK------LKPGDLVGVNKDSYLILDT 142
+E G+ + + GK VL +P +VD DK L P V + DSY++
Sbjct: 79 QEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLV 138
Query: 143 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGV 202
LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGV
Sbjct: 139 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGV 198
Query: 203 LLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCII 262
LLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P II
Sbjct: 199 LLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSII 258
Query: 263 FIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 321
F+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL
Sbjct: 259 FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQAL 318
Query: 322 MRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVE 381
+R GR+DRKIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC E
Sbjct: 319 LRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTE 378
Query: 382 AGMLALRRDATEVNHEDFNEGIIQVQAK 409
AGM ALR V EDF + +V K
Sbjct: 379 AGMFALRERRVHVTQEDFEMAVAKVMKK 406
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 317 bits (812), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/380 (43%), Positives = 246/380 (64%), Gaps = 17/380 (4%)
Query: 31 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEE 90
L ++R L R + + +V+ +E+++L ++ VG +V+++ N
Sbjct: 43 LQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN------- 95
Query: 91 DGANIDLDSQRKGKCVVLKTSYPSVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSR 150
+ + +GK VV + +D K+ P V + DSY++ LPS+ D
Sbjct: 96 ---KVLVKVHPEGKYVV------DIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPL 146
Query: 151 VKAMEVDEKPTEDYNDIGGLEKQIQELIEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGT 210
V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGT
Sbjct: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
Query: 211 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAI 270
GKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+I
Sbjct: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
Query: 271 GTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 329
G+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DR
Sbjct: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
Query: 330 KIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
KIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC EAGM ALR
Sbjct: 327 KIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
Query: 390 DATEVNHEDFNEGIIQVQAK 409
V EDF + +V K
Sbjct: 387 RRVHVTQEDFEMAVAKVMKK 406
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,108,915
Number of Sequences: 539616
Number of extensions: 6929919
Number of successful extensions: 30699
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 1242
Number of HSP's that attempted gapping in prelim test: 26957
Number of HSP's gapped (non-prelim): 3671
length of query: 418
length of database: 191,569,459
effective HSP length: 120
effective length of query: 298
effective length of database: 126,815,539
effective search space: 37791030622
effective search space used: 37791030622
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)