Your job contains 1 sequence.
>039867
MTRRCLLSPQHIKFNMSSYNSLYAFRMKLTGLVHFSYEAYRSYLHICFKCDKAPKFYCLC
CPSAICGPCLYEAEFAVVKGDKGLCDECLELVLRKEEKKDVDPNQCKNDFSDPSTKEFFF
YDYWRIIKKKECLTSEEVIAASNLLKRGENYKFASDSDEYDIGKEKKSSKRKRPKSSKRK
RPKRKQSAMKSKFKSSRKEFIGWGSKSLLEFLVSIGKDTTRKLSKQVVAIIIREYCKENN
LFHPDKKEICCDAKLQALLGRKSVEKRKLCELLTIHFAENLDCSEEELLCSSENEDDDSV
ACKRQMHSSSKHKAQNLLAKTPQEQMRKNIML
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039867
(332 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2827287 - symbol:NERD "Needed for RDR2-indepen... 290 5.7e-24 1
TAIR|locus:2080863 - symbol:AT3G51120 species:3702 "Arabi... 258 9.5e-21 1
TAIR|locus:2060949 - symbol:AT2G18090 "AT2G18090" species... 174 3.4e-19 2
TAIR|locus:2150828 - symbol:AT5G08430 species:3702 "Arabi... 185 6.7e-12 1
TAIR|locus:2154473 - symbol:AT5G23480 species:3702 "Arabi... 166 1.4e-10 2
>TAIR|locus:2827287 [details] [associations]
symbol:NERD "Needed for RDR2-independent DNA methylation"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0042393
"histone binding" evidence=IDA] InterPro:IPR000571
InterPro:IPR001965 InterPro:IPR003121 InterPro:IPR003169
InterPro:IPR004343 InterPro:IPR018144 InterPro:IPR019787
Pfam:PF00642 Pfam:PF02201 Pfam:PF02213 Pfam:PF03126 PROSITE:PS50016
PROSITE:PS50103 PROSITE:PS50829 PROSITE:PS51360 SMART:SM00249
SMART:SM00444 SMART:SM00719 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006352 GO:GO:0016570 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:NOG12793
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031047 GO:GO:0042393
SUPFAM:SSF55277 EMBL:AC007047 EMBL:DQ446507 IPI:IPI00546025
PIR:F84540 PIR:G84540 RefSeq:NP_179241.4 UniGene:At.40269
HSSP:Q9FT92 PaxDb:Q9SIV5 PRIDE:Q9SIV5 GeneID:816147
KEGG:ath:AT2G16485 TAIR:At2g16485 HOGENOM:HOG000215989
InParanoid:Q9SIV5 ArrayExpress:Q9SIV5 Genevestigator:Q9SIV5
GO:GO:0032776 GO:GO:0010964 SUPFAM:SSF47592 Uniprot:Q9SIV5
Length = 1773
Score = 290 (107.1 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 72/241 (29%), Positives = 116/241 (48%)
Query: 45 HICFKCDKAPKFYCLCCPSAICGPCLYEAEFAVVKGDKGLCDECLE---LVLRKEEKKDV 101
H+C KC+K + C C ++C C +A F ++G+KGLC+ C+E L+ RK+++K+
Sbjct: 646 HLCSKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRGNKGLCETCMETVKLIERKQQEKE- 704
Query: 102 DPNQCKNDFSDPSTKEFFFYDYWRIIKKKECLTSEEVIAASNLLKRGENYKF----ASDS 157
P Q DF+D ++ E+ F DYW +K + L+ EE+ A LK E AS++
Sbjct: 705 -PAQL--DFNDKTSWEYLFKDYWIDLKTQLSLSPEELDQAKRPLKGHETNASKQGTASET 761
Query: 158 DEYDIGKEXXXXXXXXXXXXXXXXXXXXQSAMKSKFKSSRKEFIGWGSKSLLEFLVSIGK 217
D G + + S K+ E + W SK LL+ +V + +
Sbjct: 762 DYVTDGGSDSDSSPKKRKTRSRSKSGSAEKILSSGDKNLSDETMEWASKELLDLVVHMRR 821
Query: 218 DTTRKLSKQVVAIIIREYCKENNLFHPDKK-EICCDAKLQALLGRKSVEKRKLCELLTIH 276
L V ++ Y K NL P +K ++ CD++LQ L G+ V ++ LL H
Sbjct: 822 GDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLFGKSHVGHFEMLNLLDSH 881
Query: 277 F 277
F
Sbjct: 882 F 882
>TAIR|locus:2080863 [details] [associations]
symbol:AT3G51120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016570 "histone
modification" evidence=IEA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=RCA] InterPro:IPR000571 InterPro:IPR001965
InterPro:IPR003121 InterPro:IPR003169 InterPro:IPR004343
InterPro:IPR018144 InterPro:IPR019787 Pfam:PF00642 Pfam:PF02201
Pfam:PF02213 Pfam:PF03126 PROSITE:PS50016 PROSITE:PS50103
PROSITE:PS50829 PROSITE:PS51360 SMART:SM00249 SMART:SM00719
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006352 GO:GO:0016570
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:NOG12793 InterPro:IPR019786 PROSITE:PS01359
SUPFAM:SSF55277 SUPFAM:SSF47592 EMBL:AL132980 IPI:IPI00542687
PIR:T45743 RefSeq:NP_190681.6 UniGene:At.858 HSSP:O43918
ProteinModelPortal:Q9SD34 SMR:Q9SD34 PaxDb:Q9SD34 PRIDE:Q9SD34
EnsemblPlants:AT3G51120.1 GeneID:824276 KEGG:ath:AT3G51120
TAIR:At3g51120 HOGENOM:HOG000177620 InParanoid:Q9SD34 OMA:ESEIWHY
Genevestigator:Q9SD34 Uniprot:Q9SD34
Length = 1292
Score = 258 (95.9 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 65/237 (27%), Positives = 107/237 (45%)
Query: 45 HICFKCDKAPKFYCLCCPSAICGPCLYEAEFAVVKGDKGLCDECLELVLRKEEKKDVDPN 104
HIC C KA + C C ++C C+ +A++ +V+G+ GLC C++ ++ E D
Sbjct: 157 HICGTCQKASSYMCYTCTFSVCKRCIKDADYVIVRGNMGLCGTCIKPIMLIENIAQGDNE 216
Query: 105 QCKNDFSDPSTKEFFFYDYWRIIKKKECLTSEEVIAASNLLKRGENYKFASDSDEYDIGK 164
K DF D + E+ F YW +K++ LT +E+ A+N K N +S
Sbjct: 217 AVKVDFDDKLSWEYLFKVYWLCLKEELSLTVDELTRANNPWKEVPNTAPKVESQNDHTNN 276
Query: 165 EXXXXXXXXXXXXXXXXXXXXQSAMKSKFKSS-RKEFIG---WGSKSLLEFLVSIGKDTT 220
+ + K S+ K+ G W +K LLEF+ + T
Sbjct: 277 RALDVAVNGTKRRRTSDSPTLPNKLDGKNPSNILKKAPGDTSWATKELLEFVSFMKNGDT 336
Query: 221 RKLSKQVVAIIIREYCKENNLFHP-DKKEICCDAKLQALLGRKSVEKRKLCELLTIH 276
LS+ V ++ +Y K+ NL P K ++ CD L L G++ V ++ +LL H
Sbjct: 337 SVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHFEMLKLLESH 393
>TAIR|locus:2060949 [details] [associations]
symbol:AT2G18090 "AT2G18090" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003121
InterPro:IPR003169 InterPro:IPR019787 Pfam:PF02201 Pfam:PF02213
PROSITE:PS50016 PROSITE:PS50829 SMART:SM00249 SMART:SM00444
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 SUPFAM:SSF55277
SUPFAM:SSF47592 HSSP:Q14839 EMBL:AF370586 IPI:IPI00535357
RefSeq:NP_849971.1 UniGene:At.13556 ProteinModelPortal:Q94JX1
SMR:Q94JX1 PaxDb:Q94JX1 PRIDE:Q94JX1 EnsemblPlants:AT2G18090.1
GeneID:816321 KEGG:ath:AT2G18090 TAIR:At2g18090 eggNOG:NOG281195
HOGENOM:HOG000151186 OMA:TATIAND PhylomeDB:Q94JX1
ProtClustDB:CLSN2690760 Genevestigator:Q94JX1 Uniprot:Q94JX1
Length = 824
Score = 174 (66.3 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 30/99 (30%), Positives = 54/99 (54%)
Query: 45 HICFKCDKAPKFYCLCCPSAICGPCLYEAEFAVVKGDKGLCDECLELVLRKEEKKDVDPN 104
HIC C K + C CP ++C C+ +E+ VV+ +KG C C++ ++ E + +
Sbjct: 126 HICTTCQKDSFYMCYTCPYSVCKRCVRSSEYVVVRENKGFCGICMKTIMLIENAAEANKE 185
Query: 105 QCKNDFSDPSTKEFFFYDYWRIIKKKECLTSEEVIAASN 143
+ + DF D + E+ F YW +K+K L+ +++ A N
Sbjct: 186 KVQVDFDDQGSWEYLFKIYWVSLKEKLGLSLDDLTKAKN 224
Score = 126 (49.4 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 203 WGSKSLLEFLVSIGKDTTRKLSKQVVAIIIREYCKENNLFH-PDKKEICCDAKLQALLGR 261
W + LL+F+ + LSK V ++ EY + NNL + P EI CD+KL L G+
Sbjct: 295 WATNELLDFVGYMKNGDISVLSKYDVQTLVLEYVRRNNLQNSPQNSEIMCDSKLMRLFGK 354
Query: 262 KSVEKRKLCELLTIHF 277
+ V+ ++ +LL HF
Sbjct: 355 ERVDNLEMLKLLDSHF 370
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 37 YEAYRSYLHICFKCDKAPKFYCLCCPSAICGPCL 70
Y Y +C +C ++ ++ + CG C+
Sbjct: 137 YMCYTCPYSVCKRCVRSSEYVVVRENKGFCGICM 170
>TAIR|locus:2150828 [details] [associations]
symbol:AT5G08430 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0016570 "histone modification"
evidence=IEA] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR003121 InterPro:IPR003169 InterPro:IPR004343
InterPro:IPR018144 Pfam:PF02201 Pfam:PF02213 Pfam:PF03126
PROSITE:PS50829 PROSITE:PS51360 SMART:SM00719 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0006352
GO:GO:0016570 SUPFAM:SSF55277 SUPFAM:SSF47592 EMBL:AL392174
EMBL:AY069913 IPI:IPI00535131 RefSeq:NP_196460.2 UniGene:At.44146
PDB:1V32 PDB:1WH2 PDBsum:1V32 PDBsum:1WH2 ProteinModelPortal:Q9FT92
SMR:Q9FT92 EnsemblPlants:AT5G08430.1 GeneID:830742
KEGG:ath:AT5G08430 TAIR:At5g08430 eggNOG:NOG292743
HOGENOM:HOG000065925 InParanoid:Q9FT92 OMA:DITWVEE PhylomeDB:Q9FT92
ProtClustDB:CLSN2690894 EvolutionaryTrace:Q9FT92
Genevestigator:Q9FT92 GermOnline:AT5G08430 Uniprot:Q9FT92
Length = 553
Score = 185 (70.2 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 187 SAMKSKFKSSRKEFIGWGSKSLLEFLVSIGKDTTRKLSKQVVAIIIREYCKENNLFHP-D 245
S+ K K + R EF+GWGS+ L+EFL S+GKDT+ +S+ V+ I +Y + L P +
Sbjct: 16 SSRKRKARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSN 75
Query: 246 KKEICCDAKLQALLGRKSVEKRKLCELLTIHF 277
KK++ CD +L L G +++ + K+ +LL H+
Sbjct: 76 KKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHY 107
>TAIR|locus:2154473 [details] [associations]
symbol:AT5G23480 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0016570 "histone modification"
evidence=IEA] InterPro:IPR003121 InterPro:IPR003169
InterPro:IPR004343 Pfam:PF02201 Pfam:PF02213 Pfam:PF03126
PROSITE:PS50829 PROSITE:PS51360 GO:GO:0005634 EMBL:CP002688
GO:GO:0003677 GO:GO:0006352 GO:GO:0016570 SUPFAM:SSF55277
SUPFAM:SSF47592 IPI:IPI00544952 RefSeq:NP_568434.4 UniGene:At.31007
EnsemblPlants:AT5G23480.1 GeneID:832414 KEGG:ath:AT5G23480
OMA:EAHQSDE ArrayExpress:F4KCX4 Uniprot:F4KCX4
Length = 570
Score = 166 (63.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 187 SAMKSKFKSSRKEFIGWGSKSLLEFLVSIGKDTTRKLSKQVVAIIIREYCKENNLFHPDK 246
S+ K K EF+GWGS++L+EFL S+G+DTT K+S+ V II Y +E + P K
Sbjct: 11 SSKKRLRKPKSLEFVGWGSRNLIEFLESLGRDTTNKISENDVTAIIMNYIREKSRETPLK 70
Query: 247 -----KEICCDAKLQALLGRKSVEKRKLCELLTIHF 277
K + CD KL+ L G + K+ +L+ H+
Sbjct: 71 SKKRRKTVACDEKLRLLFGAGKINVIKVPDLVEKHY 106
Score = 48 (22.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 308 SSSKHKAQ--NLLAKTPQEQMR 327
SSS K+Q +LL K P+EQ+R
Sbjct: 338 SSSVKKSQENSLLLKNPEEQLR 359
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 332 291 0.00089 115 3 11 22 0.48 33
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 616 (65 KB)
Total size of DFA: 225 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.51u 0.12s 23.63t Elapsed: 00:00:02
Total cpu time: 23.51u 0.12s 23.63t Elapsed: 00:00:02
Start: Mon May 20 15:40:34 2013 End: Mon May 20 15:40:36 2013