BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039869
(152 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----------------VAGKDAHE 49
E IG YTK IL GL ++H + +VH DI+GDN L+ +AG +
Sbjct: 121 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180
Query: 50 AEISAFLQRHGLLLI--------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ LQ +I D W+LG +EM T + + G A+ +
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGEPQAA---MF 236
Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
++ F PE P ++S + + F+ KCF R A +L F V
Sbjct: 237 KVGMFKVH-PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV 284
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----------------VAGKDAHE 49
E IG YTK IL GL ++H + +VH DI+GDN L+ +AG +
Sbjct: 107 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 166
Query: 50 AEISAFLQRHGLLLI--------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ LQ +I D W+LG +EM T + + G A+ +
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGEPQAA---MF 222
Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
++ F PE P ++S + + F+ KCF R A +L F
Sbjct: 223 KVGMFKVH-PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 267
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
+ L E +I K L L+++H + ++H D++ N L D A+ +SA +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 57 QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
QR + Y D W+LG +EM AEI L
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEP---PHHELN 244
Query: 96 SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
LL++ SE P PS S + +DFL KC + RWT +L HPF +VD
Sbjct: 245 PMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
+ L E +I K L L+++H + ++H D++ N L D A+ +SA +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 57 QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
QR + Y D W+LG +EM AEI L
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEP---PHHELN 244
Query: 96 SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
LL++ SE P PS S + +DFL KC + RWT +L HPF +VD
Sbjct: 245 PMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
+ L E +I K L L+++H + ++H D++ N L D A+ +SA +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 57 QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
QR + Y D W+LG +EM AEI L
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEP---PHHELN 244
Query: 96 SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
LL++ SE P PS S + +DFL KC + RWT +L HPF +VD
Sbjct: 245 PMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 37/179 (20%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA-----F 55
+ L E +I K L L+++H + ++H D++ N L D A+ +SA
Sbjct: 103 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTX 162
Query: 56 LQRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGL 94
+QR + Y D W+LG +EM AEI L
Sbjct: 163 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEP---PHHEL 217
Query: 95 ASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
LL++ SE P PS S + +DFL KC + RWT +L HPF +VD
Sbjct: 218 NPMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 274
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAF--- 55
G+P I +LRGLD +HSH +VH D++ N L+ + D A I +F
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 56 LQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGS-----FGR----- 92
L + L Y VD W++G +F EM + GS G+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 93 GLA-----SRDDLLELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
GL RD L AF S+ + +F ++I E G+D L KC R +A L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 144 AHPF 147
+HP+
Sbjct: 296 SHPY 299
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAF--- 55
G+P I +LRGLD +HSH +VH D++ N L+ + D A I +F
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 56 LQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGS-----FGR----- 92
L + L Y VD W++G +F EM + GS G+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 93 GLA-----SRDDLLELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
GL RD L AF S+ + +F ++I E G+D L KC R +A L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 144 AHPF 147
+HP+
Sbjct: 296 SHPY 299
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAF--- 55
G+P I +LRGLD +HSH +VH D++ N L+ + D A I +F
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 56 LQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGS-----FGR----- 92
L + L Y VD W++G +F EM + GS G+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 93 GLA-----SRDDLLELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
GL RD L AF S+ + +F ++I E G+D L KC R +A L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 144 AHPF 147
+HP+
Sbjct: 296 SHPY 299
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ +N LL+ + A
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 281 AKAALAHPF 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ +N LL+ + A
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 280 AKAALAHPF 288
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ +N LL+ + A
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 279 AKAALAHPF 287
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ +N LL+ + A
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 279 AKAALAHPF 287
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ +N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 277 AKAALAHPF 285
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 106 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 164
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 165 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 225 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 284
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 285 AKAALAHPF 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 159 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 279 AKAALAHPF 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 277 AKAALAHPF 285
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 106 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 164
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 225 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 284
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 285 AKAALAHPF 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 281 AKAALAHPF 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 277 AKAALAHPF 285
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 161
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 162 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 222 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 281
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 282 AKAALAHPF 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 277 AKAALAHPF 285
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 277 AKAALAHPF 285
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 281 AKAALAHPF 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 280 AKAALAHPF 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 280 AKAALAHPF 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 277 AKAALAHPF 285
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 279 AKAALAHPF 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 280 AKAALAHPF 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 279 AKAALAHPF 287
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 281 AKAALAHPF 289
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 281 AKAALAHPF 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 278 AKAALAHPF 286
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 281 AKAALAHPF 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
G+P I Y +L+GL HSH ++H D++ N LL+ + A
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 161
Query: 48 --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
+ E+ R +L+ Y+ VD W+LG +F EM+T +EI
Sbjct: 162 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 92 RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
R L + D+++ + + P FP + EDGR LS+ R +
Sbjct: 222 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 281
Query: 139 AKHVLAHPF 147
AK LAHPF
Sbjct: 282 AKAALAHPF 290
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAH----- 48
+ E E Y + + +GL H+H + VH D++ +N + G AH
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
Query: 49 -------EAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFG-----RGLAS 96
AE +A G + Y+ D W++G V ++ + +S +G R + S
Sbjct: 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG-VLSYILLSGLSPFGGENDDETLRNVKS 370
Query: 97 RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
D ++ AFS ISEDG+DF+ K + R T L HP+
Sbjct: 371 CDWNMDDSAFSG--------ISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 31/167 (18%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE------AEISAFLQR 58
L E +I + +L+ L ++H+ G++H DI+ D+ LL A+IS + +
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197
Query: 59 HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
L+ +Y VD W+LG + +EM+ E + R
Sbjct: 198 RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR----- 252
Query: 103 LIAFSSEVPEFPSN--ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S P+ ++ +S RDFL + +R Q R TA+ +L HPF
Sbjct: 253 --LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAH----- 48
+ E E Y + + +GL H+H + VH D++ +N + G AH
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205
Query: 49 -------EAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFG-----RGLAS 96
AE +A G + Y+ D W++G V ++ + +S +G R + S
Sbjct: 206 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG-VLSYILLSGLSPFGGENDDETLRNVKS 264
Query: 97 RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
D ++ AFS ISEDG+DF+ K + R T L HP+
Sbjct: 265 CDWNMDDSAFSG--------ISEDGKDFIRKLLLADPNTRMTIHQALEHPW 307
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-----SAFLQ 57
K EH+ R K + G+ ++H H +VH D++ +N LL + + + +I S Q
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 58 RHGLL-----LIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
++ + Y++ D W+ G + +++ +G + R
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR-- 233
Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+E ++ ++P++ + IS+D +D + K LR TA L HP+
Sbjct: 234 -VETGKYAFDLPQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-----SAFLQ 57
K EH+ R K + G+ ++H H +VH D++ +N LL + + + +I S Q
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 58 RHGLL-----LIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
++ + Y++ D W+ G + +++ +G + R
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR-- 233
Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+E ++ ++P++ + IS+D +D + K LR TA L HP+
Sbjct: 234 -VETGKYAFDLPQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K EH+ R K + G+ ++H H +VH D++ +N LL + + + +I F Q
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 58 RHGLL-----LIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
++ + Y++ D W+ G + +++ +G + R
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR-- 233
Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+E ++ ++P++ + IS+D +D + K LR TA L HP+
Sbjct: 234 -VETGKYAFDLPQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 43/175 (24%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH------EAEISAFLQR 58
L E I ++ILRGL H+H H ++H DI+G N LL + A++ + R
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 59 HGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + D W+LG +EM G
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM-----------AEGAPPL 234
Query: 98 DDLLELIAF----SSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
D+ + A + P S S+ + F+ C ++ H R + ++ HPF
Sbjct: 235 CDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
E +I ++ L+ L+ +HS+ ++H DI+ DN LL G D A+I+ +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 172
Query: 59 HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
++ Y VD W+LG + +EM+ E + L
Sbjct: 173 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 226
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
LIA ++ PE P +S RDFL++C + R +AK +L H F
Sbjct: 227 LIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF 272
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
E +I ++ L+ L+ +HS+ ++H DI+ DN LL G D A+I+ +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 172
Query: 59 HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
++ Y VD W+LG + +EM+ E + L
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 226
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
LIA ++ PE P +S RDFL++C + R +AK +L H F
Sbjct: 227 LIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
E +I ++ L+ L+ +HS+ ++H DI+ DN LL G D A+I+ +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 172
Query: 59 HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
++ Y VD W+LG + +EM+ E + L
Sbjct: 173 RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 226
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
LIA ++ PE P +S RDFL++C + R +AK +L H F
Sbjct: 227 LIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
E +I ++ L+ L+ +HS+ ++H DI+ DN LL G D A+I+ +
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 173
Query: 59 HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
++ Y VD W+LG + +EM+ E + L
Sbjct: 174 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 227
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
LIA ++ PE P +S RDFL++C + R +AK ++ H F
Sbjct: 228 LIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQF 273
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+ E
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA 163
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
R G D W++G VEM A G + R + +LL+
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM------AVGRYPRPPMAIFELLDY 217
Query: 104 IAFSSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
I + P+ PS + S + +DF++KC I+ R K ++ H F
Sbjct: 218 IV-NEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 261
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 39/168 (23%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQRH 59
E +I K+IL+GLD++HS +H DI+ N LL D A+ ++R+
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 178
Query: 60 GLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL---- 100
+ +I D W+LG +E+ +G D+
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL-----------AKGEPPNSDMHPMR 227
Query: 101 -LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L LI + P + ++ ++F+ C + R TAK +L H F
Sbjct: 228 VLFLIP-KNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 39/173 (22%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISA-------F 55
K L E EI + L+GL+++H +H DI+ N LL A A+
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXM 179
Query: 56 LQRHGLL---------LIYHV------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
+R+ ++ +I + D W+LG +EM G D+
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM-----------AEGKPPYADI 228
Query: 101 LELIAF----SSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+ A ++ P F P S++ DF+ +C ++ + R TA +L HPF
Sbjct: 229 HPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 52/191 (27%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL--- 63
E E R +D+ LD +H+ G+ H D++ +N L + + +I F G+ L
Sbjct: 110 EREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS 169
Query: 64 --------------------------------IY--HVDTWALGRVFVEMMTAEISAWGS 89
Y D W+LG V M++ G
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
Query: 90 FG------RGLASR---DDLLELIAFSSEVPEFP----SNISEDGRDFLSKCFIRVHQLR 136
G RG R + L E I EFP ++IS + +D +SK +R + R
Sbjct: 230 CGADCGWDRGEVCRVCQNKLFESIQEGKY--EFPDKDWAHISSEAKDLISKLLVRDAKQR 287
Query: 137 WTAKHVLAHPF 147
+A VL HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 39/170 (22%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
L E I ++IL+GLD++HS +H DI+ N LL D A+ ++
Sbjct: 113 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 172
Query: 58 RHGLL---------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
R+ + + D W+LG +E+ +G DL
Sbjct: 173 RNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL-----------AKGEPPNSDLHP 221
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L LI +S P S+ ++F+ C + + R TAK +L H F
Sbjct: 222 MRVLFLIPKNSP-PTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
E +I ++ L+ L+ +HS+ ++H +I+ DN LL G D A+I+ +
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 173
Query: 59 HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
++ Y VD W+LG + +EM+ E + L
Sbjct: 174 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 227
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
LIA ++ PE P +S RDFL++C + R +AK ++ H F
Sbjct: 228 LIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQF 273
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHE-----AEISAFLQRHG 60
E +I +LR L ++H+ G++H DI+ D+ LL + G+ A++S + +
Sbjct: 140 EEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 199
Query: 61 LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
L L Y VD W+LG + +EM+ E + + L +
Sbjct: 200 XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF--------NEPPLQAMR 251
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+P + +S R FL +R R TA+ +L HPF
Sbjct: 252 RIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPF 297
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 5 LPEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 179
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
S R G D W++G VEM GS G G + +LL+
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY-PIGS-GSGSMAIFELLDY 237
Query: 104 IAFSSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
I + P+ PS + S + +DF++KC I+ R K ++ H F
Sbjct: 238 IV-NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 281
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
L E +I ++IL+GLD++HS +H DI+ N LL + A+ ++
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 58 RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
R+ + +I D W+LG +E+ RG +L
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 229
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L LI + P N S+ ++F+ C + R TAK +L H F
Sbjct: 230 MKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 278
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
L E +I ++IL+GLD++HS +H DI+ N LL + A+ ++
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 58 RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
R+ + +I D W+LG +E+ RG +L
Sbjct: 161 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 209
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L LI + P N S+ ++F+ C + R TAK +L H F
Sbjct: 210 MKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 67/174 (38%), Gaps = 32/174 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
+GL E +I + +L L+ +HS ++H D++ N L+ D A+ +SA L
Sbjct: 104 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 163
Query: 57 QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
Q+ + Y D W+LG +EM E L
Sbjct: 164 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-----HHELN 218
Query: 96 SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
LL++ PS S + RDFL + + R +A +L HPF S
Sbjct: 219 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 272
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 72/193 (37%), Gaps = 50/193 (25%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNT-----------------LLVAGK 45
+G+PEH + T L+ ++ H H +H D++ +N LL
Sbjct: 97 RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156
Query: 46 DAHEAEISAFLQRHGLLLI------YHVDTWALGRVFVEMMTAEISAW---GSFGRGLAS 96
D ++ E++ R LL+ VD WA+G VF E+++ + W +
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLI 215
Query: 97 RDDLLELIAFSSEV--------------PE--------FPSNISEDGRDFLSKCFIRVHQ 134
R L +LI +V PE FP NIS L C
Sbjct: 216 RKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFP-NISYPALGLLKGCLHMDPT 274
Query: 135 LRWTAKHVLAHPF 147
R T + +L HP+
Sbjct: 275 ERLTCEQLLHHPY 287
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 37/169 (21%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
L E +I ++IL+GLD++HS +H DI+ N LL + A+ ++
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 58 RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
R+ + +I D W+LG +E+ RG +L
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 224
Query: 103 LIAF----SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+ + P N S+ ++F+ C + R TAK +L H F
Sbjct: 225 MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
L E +I ++IL+GLD++HS +H DI+ N LL + A+ ++
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 58 RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
R+ + +I D W+LG +E+ RG +L
Sbjct: 161 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 209
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L LI + P N S+ ++F+ C + R TAK +L H F
Sbjct: 210 MKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 67/174 (38%), Gaps = 32/174 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
+GL E +I + +L L+ +HS ++H D++ N L+ D A+ +SA L
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171
Query: 57 QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
Q+ + Y D W+LG +EM E L
Sbjct: 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-----HHELN 226
Query: 96 SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
LL++ PS S + RDFL + + R +A +L HPF S
Sbjct: 227 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 41/176 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF------LQ 57
L E + + K I G+ H+H ++H D++ +N L V +DA + +I F
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV-NRDAKQIKIIDFGLARRYKP 241
Query: 58 RHGL------------------LLIYHVDTWALGRVFVEMMTAEISAW------GSFGRG 93
R L + + D W++G V M+ + +S + +
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVG-VIAYMLLSGLSPFLGDNDAETLNNI 300
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
LA R DL E EF +ISE+ ++F+SK I+ R +A L HP+ S
Sbjct: 301 LACRWDL--------EDEEF-QDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
E +I +L+ L +H+ G++H DI+ D+ LL V D A++S + R
Sbjct: 169 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228
Query: 61 LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
L L Y VD W+LG + +EM+ E + + L +
Sbjct: 229 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 280
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+P N +S + FL + +R R TA +L HPF
Sbjct: 281 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 326
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
E +I +L+ L +H+ G++H DI+ D+ LL V D A++S + R
Sbjct: 246 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305
Query: 61 LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
L L Y VD W+LG + +EM+ E + + L +
Sbjct: 306 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 357
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+P N +S + FL + +R R TA +L HPF
Sbjct: 358 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 403
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
E +I +L+ L +H+ G++H DI+ D+ LL V D A++S + R
Sbjct: 126 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 185
Query: 61 LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
L L Y VD W+LG + +EM+ E + + L +
Sbjct: 186 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 237
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+P N +S + FL + +R R TA +L HPF
Sbjct: 238 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
E +I +L+ L +H+ G++H DI+ D+ LL V D A++S + R
Sbjct: 124 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 183
Query: 61 LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
L L Y VD W+LG + +EM+ E + + L +
Sbjct: 184 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 235
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+P N +S + FL + +R R TA +L HPF
Sbjct: 236 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 281
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AH 48
+ L E E + K IL G++++H+ + H D++ +N +L+ AH
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 49 EAEISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
E E F G ++ Y D W++G ++T + + S G
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDT 222
Query: 96 SRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
++ L + A S + EF S SE +DF+ K ++ + R T + L HP
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G++++H+ + H D++ +N +L+ AHE
Sbjct: 110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 51 EISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
E F G ++ Y D W++G ++T + + S G +
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 224
Query: 98 DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A S + EF S SE +DF+ K ++ + R T + L HP
Sbjct: 225 ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
E +I +L+ L +H+ G++H DI+ D+ LL V D A++S + R
Sbjct: 115 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174
Query: 61 LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
L L Y VD W+LG + +EM+ E + + L +
Sbjct: 175 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 226
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+P N +S + FL + +R R TA +L HPF
Sbjct: 227 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
E +I +L+ L +H+ G++H DI+ D+ LL V D A++S + R
Sbjct: 119 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 178
Query: 61 LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
L L Y VD W+LG + +EM+ E + + L +
Sbjct: 179 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 230
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+P N +S + FL + +R R TA +L HPF
Sbjct: 231 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 276
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 41/178 (23%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVA---------------- 43
+ +PE +G+ I++ L+H+HS ++H D++ N L+ A
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161
Query: 44 ---GKDAHEA--------EISAFLQRHGLLLIYHV--DTWALGRVFVEMMTAEISAWGSF 90
KD I+ L + G Y V D W+LG +E+ + S+
Sbjct: 162 DDVAKDIDAGCKPYMAPERINPELNQKG----YSVKSDIWSLGITMIELAILRF-PYDSW 216
Query: 91 GRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
G ++E P+ P++ S + DF S+C + + R T ++ HPF
Sbjct: 217 GTPFQQLKQVVE-----EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G++++H+ + H D++ +N +L+ AHE
Sbjct: 110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 51 EISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
E F G ++ Y D W++G ++T + + S G +
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 224
Query: 98 DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A S + EF S SE +DF+ K ++ + R T + L HP
Sbjct: 225 ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 21/100 (21%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--------- 51
GLP I + LRGLD +H++ +VH D++ +N L+ +G A+
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY 172
Query: 52 --------ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
++ + + +LL VD W++G +F EM
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 41/177 (23%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLV------------------ 42
+ +PE +G+ I++ L+H+HS ++H D++ N L+
Sbjct: 147 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206
Query: 43 -------AGKDAHEA--EISAFLQRHGLLLIYHV--DTWALGRVFVEMMTAEISAWGSFG 91
AG + A I+ L + G Y V D W+LG +E+ + S+G
Sbjct: 207 SVAKTIDAGCKPYMAPERINPELNQKG----YSVKSDIWSLGITMIELAILRF-PYDSWG 261
Query: 92 RGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
++E P+ P++ S + DF S+C + + R T ++ HPF
Sbjct: 262 TPFQQLKQVVE-----EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE------------ 51
GLP I + LRGLD +H++ +VH D++ +N L+ +G A+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 52 -----ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
++ + + +LL VD W++G +F EM
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE------------ 51
GLP I + LRGLD +H++ +VH D++ +N L+ +G A+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 52 -----ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
++ + + +LL VD W++G +F EM
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE------------ 51
GLP I + LRGLD +H++ +VH D++ +N L+ +G A+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 52 -----ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
++ + + +LL VD W++G +F EM
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
+A GLPE E +D++ G++H+ +G+VH +I+ N + V G+D
Sbjct: 105 NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
+A GLPE E +D++ G++H+ +G+VH +I+ N + V G+D
Sbjct: 105 NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 43/174 (24%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----LVAGKDAHEAEISA--- 54
K L E EI T L+GL ++HSH ++H D++ N L LV D A I A
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208
Query: 55 ------FLQRHGLLLIY-------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ ++L VD W+LG +E+ + L
Sbjct: 209 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--------------RKPPLF 254
Query: 102 ELIAFSS-------EVPEFPS-NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+ A S+ E P S + SE R+F+ C ++ Q R T++ +L H F
Sbjct: 255 NMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 39/179 (21%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
K + E Y K++L + IH HG+VH D++ N L+V G + + + +
Sbjct: 106 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 165
Query: 54 AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
+ ++ + + ++ D W+LG + M +
Sbjct: 166 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 221
Query: 89 SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
F + + L +I + E+ EFP +D +D L C R + R + +LAHP+
Sbjct: 222 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 279
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 39/179 (21%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
K + E Y K++L + IH HG+VH D++ N L+V G + + + +
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 209
Query: 54 AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
+ ++ + + ++ D W+LG + M +
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 265
Query: 89 SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
F + + L +I + E+ EFP +D +D L C R + R + +LAHP+
Sbjct: 266 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 39/182 (21%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
K + E Y K++L + IH HG+VH D++ N L+V G + + + +
Sbjct: 102 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 161
Query: 54 AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
+ ++ + + ++ D W+LG + M +
Sbjct: 162 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 217
Query: 89 SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP 148
F + + L +I + E+ EFP +D +D L C R + R + +LAHP+
Sbjct: 218 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
Query: 149 SV 150
+
Sbjct: 277 QI 278
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 39/182 (21%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
K + E Y K++L + IH HG+VH D++ N L+V G + + + +
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 181
Query: 54 AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
+ ++ + + ++ D W+LG + M +
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 237
Query: 89 SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP 148
F + + L +I + E+ EFP +D +D L C R + R + +LAHP+
Sbjct: 238 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
Query: 149 SV 150
+
Sbjct: 297 QI 298
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEISAFLQRH 59
E Y K++L + IH HG+VH D++ N L+V G + + + ++ ++
Sbjct: 109 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 168
Query: 60 GLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWGSFGRGL 94
+ + ++ D W+LG + M + F + +
Sbjct: 169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT----PFQQII 224
Query: 95 ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
L +I + E+ EFP +D +D L C R + R + +LAHP+ +
Sbjct: 225 NQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 31/172 (18%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AH 48
+ L E E + K IL G++++H+ + H D++ +N +L+ AH
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 49 EAEISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
E E F G ++ Y D W++G ++T + + S G
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDT 222
Query: 96 SRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
++ L + + S + EF S+ SE +DF+ K ++ + R T + L HP
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 43/174 (24%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----LVAGKDAHEAEISA--- 54
K L E EI T L+GL ++HSH ++H D++ N L LV D A I A
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169
Query: 55 ------FLQRHGLLLIY-------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ ++L VD W+LG +E+ + L
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--------------RKPPLF 215
Query: 102 ELIAFSS-------EVPEFPS-NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+ A S+ E P S + SE R+F+ C ++ Q R T++ +L H F
Sbjct: 216 NMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 31/172 (18%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AH 48
+ L E E + K IL G++++H+ + H D++ +N +L+ AH
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 49 EAEISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
E E F G ++ Y D W++G ++T + + S G
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDT 222
Query: 96 SRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
++ L + + S + EF S+ SE +DF+ K ++ + R T + L HP
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 39/173 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEISAFLQRH 59
E Y K++L + IH HG+VH D++ N L+V G + + + ++ ++
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 60 GLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWGSFGRGL 94
+ + ++ D W+LG + M + F + +
Sbjct: 216 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT----PFQQII 271
Query: 95 ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L +I + E+ EFP +D +D L C R + R + +LAHP+
Sbjct: 272 NQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G++++H+ + H D++ +N +L+ AHE
Sbjct: 110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 51 EISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
E F G ++ Y D W++G ++T + + S G +
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 224
Query: 98 DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + + S + EF S+ SE +DF+ K ++ + R T + L HP
Sbjct: 225 ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 39/173 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEISAFLQRH 59
E Y K++L + IH HG+VH D++ N L+V G + + + ++ ++
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 60 GLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWGSFGRGL 94
+ + ++ D W+LG + M + F + +
Sbjct: 216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT----PFQQII 271
Query: 95 ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L +I + E+ EFP +D +D L C R + R + +LAHP+
Sbjct: 272 NQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQRH 59
+ E E+ Y + GL H+H H +VH DI+ +N ++ K A +I F L
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN-IMCETKKASSVKIIDFGLATKLNPD 204
Query: 60 GLLLI-------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
++ + ++ D WA+G V ++ + +S + A DDL
Sbjct: 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIG-VLGYVLLSGLSPF-------AGEDDL 256
Query: 101 LELIAFSSEVPEFP----SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
L EF S++S + +DF+ + + R T L HP+
Sbjct: 257 ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 307
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
LPE ++ Y +D L L H+HS GLVH D++ N L
Sbjct: 154 LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL 190
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 35/160 (21%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAFLQRHGLL 62
+ RG+D++H+ ++H D++ +N L +A + + + F Q G +
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 63 L---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
L + D +A G V E+MT ++ + +RD ++E++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQIIEMVGRG 241
Query: 108 SEVPEFP---SNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
S P+ SN + + +++C + R + +LA
Sbjct: 242 SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 66/189 (34%), Gaps = 44/189 (23%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL------------------LVAG 44
+ +P I Y +LR L +IHS G+ H DI+ N L L+AG
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195
Query: 45 KDAHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFG-------- 91
+ S + + L+ ++D W+ G V E+M + G G
Sbjct: 196 EPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII 255
Query: 92 --RGLASRDDLLELIAFSSE--VPE---------FPSNISEDGRDFLSKCFIRVHQLRWT 138
G SR+ + + E P+ F D D +S+ R T
Sbjct: 256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315
Query: 139 AKHVLAHPF 147
A L HPF
Sbjct: 316 AIEALCHPF 324
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 35/160 (21%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAFLQRHGLL 62
+ RG+D++H+ ++H D++ +N L +A + + + F Q G +
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 63 L---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
L + D +A G V E+MT ++ + +RD ++E++
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQIIEMVGRG 241
Query: 108 SEVPEFP---SNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
S P+ SN + + +++C + R + +LA
Sbjct: 242 SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 37/175 (21%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLV------------------ 42
+ +PE +G+ I++ L+H+HS ++H D++ N L+
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
Query: 43 -------AGKDAHEA--EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG 93
AG + A I+ L + G + D W+LG +E+ + S+G
Sbjct: 190 DVAKDIDAGCKPYXAPERINPELNQKGYSV--KSDIWSLGITXIELAILRF-PYDSWGTP 246
Query: 94 LASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
++E P+ P++ S + DF S+C + + R T + HPF
Sbjct: 247 FQQLKQVVE-----EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 31/158 (19%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAG-KDAH----EAEISAFLQ-----RHGLLLI 64
K +L G+ ++H H +VH D++ +N LL + KDA + +SA + + L
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTA 202
Query: 65 YHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDL--LELIAFSSE 109
Y++ D W++G + ++ + + FG G ++ L +E ++ +
Sbjct: 203 YYIAPEVLRKKYDEKCDVWSIGVILFILL----AGYPPFG-GQTDQEILRKVEKGKYTFD 257
Query: 110 VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
PE+ N+SE +D + + Q R +A+ L HP+
Sbjct: 258 SPEW-KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 39/182 (21%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG------------------ 44
K + E Y K++L + IH HG+VH D++ N L+V G
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXX 181
Query: 45 ---KDAHEAEISAFL----------QRHG---LLLIYHVDTWALGRVFVEMMTAEISAWG 88
KD+ ++ + +G + D W+LG + M +
Sbjct: 182 XVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 237
Query: 89 SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP 148
F + + L +I + E+ EFP +D +D L C R + R + +LAHP+
Sbjct: 238 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
Query: 149 SV 150
+
Sbjct: 297 QI 298
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH 59
S K E + R + +L G+ ++H + +VH D++ +N LL + KDA+ I L H
Sbjct: 125 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 184
Query: 60 ---------GLLLIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ Y++ D W+ G + +++ G A+
Sbjct: 185 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNG------ANE 238
Query: 98 DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
D+L+ + ++ E+P++ +SE +D + K V +R +A+ L H
Sbjct: 239 YDILKKVEKGKYTFELPQW-KKVSESAKDLIRKMLTYVPSMRISARDALDH 288
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 35/159 (22%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAFLQ 57
Y +I+ GL +HS G+V+ D++ DN LL KD H +A+ + F
Sbjct: 124 YAAEIILGLQFLHSKGIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNEFCG 181
Query: 58 RH---------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS 108
G + VD W+ G + EM+ + G ++L I +
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------DEEELFHSIRMDN 235
Query: 109 EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK-HVLAHP 146
P +P + ++ +D L K F+R + R + + HP
Sbjct: 236 --PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 272
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 35/159 (22%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAFLQ 57
Y +I+ GL +HS G+V+ D++ DN LL KD H +A+ + F
Sbjct: 123 YAAEIILGLQFLHSKGIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNXFCG 180
Query: 58 RH---------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS 108
G + VD W+ G + EM+ + G ++L I +
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------DEEELFHSIRMDN 234
Query: 109 EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK-HVLAHP 146
P +P + ++ +D L K F+R + R + + HP
Sbjct: 235 --PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 271
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 48/193 (24%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD-------------- 46
S + +P + I Y + R + IHS G+ H DI+ N LLV KD
Sbjct: 134 SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQN-LLVNSKDNTLKLCDFGSAKKL 192
Query: 47 -AHEAEI----SAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAE--ISAWGSFGR-- 92
E + S F + L+L +D W++G VF E++ + S S +
Sbjct: 193 IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLV 252
Query: 93 ------GLASRDDLLELIAFSSEVPEFPSNISEDGR------------DFLSKCFIRVHQ 134
G +++ ++ + +EV FP+ ++D R D L +
Sbjct: 253 RIIQIMGTPTKEQMIRMNPHYTEV-RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311
Query: 135 LRWTAKHVLAHPF 147
LR +AHPF
Sbjct: 312 LRINPYEAMAHPF 324
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
S +PE YT +++ LD IHS GL+H D++ DN LL
Sbjct: 167 SNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL 207
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 35/160 (21%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FLQRHGLL 62
+ RG+D++H+ ++H D++ +N L V D A + + F Q G +
Sbjct: 115 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 63 L---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
L + D +A G V E+MT ++ + +RD ++E++
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQIIEMVGRG 229
Query: 108 SEVPEFP---SNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
S P+ SN + + +++C + R + +LA
Sbjct: 230 SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 269
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 23/103 (22%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVAGKD 46
GL + +Y I+ G+ HSH ++H DI+ +N L L A +
Sbjct: 120 GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179
Query: 47 AHEAEISAFLQRHGLLLI------YHVDTWALGRVFVEMMTAE 83
++ E++ R LL+ VD WA+G + EM E
Sbjct: 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 38/174 (21%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG--------------KDA 47
K E+E + I+ G+ ++HSHG++H D+ N LL K
Sbjct: 106 VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165
Query: 48 HEAEIS------------AFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
HE + A HGL D W+LG +F ++ F
Sbjct: 166 HEKHYTLCGTPNYISPEIATRSAHGL----ESDVWSLGCMFYTLLIGR----PPFDTDTV 217
Query: 96 SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
++ L +++ E+P F +S + +D + + R R + VL HPF S
Sbjct: 218 -KNTLNKVVLADYEMPSF---LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF----LQRHGLLLI------ 64
+ +L + ++H +G+VH D++ +N L + ++ + I+ F ++++G++
Sbjct: 113 QQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPG 172
Query: 65 -------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA---FSS 108
VD W++G + ++ + F S+ L E I +
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITYILLC----GYPPFYEETESK--LFEKIKEGYYEF 226
Query: 109 EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
E P F +ISE +DF+ + R+T + L+HP+
Sbjct: 227 ESP-FWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.0 bits (84), Expect = 0.004, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH 59
S K E + R + +L G+ ++H + +VH D++ +N LL + KDA+ I L H
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 60 ---------GLLLIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ Y++ D W+ G + +++ G A+
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNG------ANE 232
Query: 98 DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
D+L+ + ++ E+P++ +SE +D + K V +R +A+ L H
Sbjct: 233 YDILKKVEKGKYTFELPQW-KKVSESAKDLIRKMLTYVPSMRISARDALDH 282
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--------I 52
+ GL + +I Y +LRG+ H H H ++H D++ N L+ + A+ I
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171
Query: 53 SAFLQRHGLLLIYH---------------VDTWALGRVFVEMMTAE 83
H ++ +++ VD W++G +F EM+T +
Sbjct: 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--------I 52
+ GL + +I Y +LRG+ H H H ++H D++ N L+ + A+ I
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171
Query: 53 SAFLQRHGLLLIYH---------------VDTWALGRVFVEMMTAE 83
H ++ +++ VD W++G +F EM+T +
Sbjct: 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.004, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH 59
S K E + R + +L G+ ++H + +VH D++ +N LL + KDA+ I L H
Sbjct: 142 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 201
Query: 60 ---------GLLLIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ Y++ D W+ G + +++ G A+
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNG------ANE 255
Query: 98 DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
D+L+ + ++ E+P++ +SE +D + K V +R +A+ L H
Sbjct: 256 YDILKKVEKGKYTFELPQW-KKVSESAKDLIRKMLTYVPSMRISARDALDH 305
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.004, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH 59
S K E + R + +L G+ ++H + +VH D++ +N LL + KDA+ I L H
Sbjct: 143 SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 202
Query: 60 ---------GLLLIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ Y++ D W+ G + +++ G A+
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNG------ANE 256
Query: 98 DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
D+L+ + ++ E+P++ +SE +D + K V +R +A+ L H
Sbjct: 257 YDILKKVEKGKYTFELPQW-KKVSESAKDLIRKMLTYVPSMRISARDALDH 306
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 27/169 (15%)
Query: 5 LPEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL--L 101
S R G D W++G VEM + SR +
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-DSRPPMAIF 219
Query: 102 ELIAF--SSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
EL+ + + P+ PS + S + +DF++KC I+ R K ++ H F
Sbjct: 220 ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 268
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
S +PE YT +++ LD IHS G +H D++ DN LL
Sbjct: 161 SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
S +PE YT +++ LD IHS G +H D++ DN LL
Sbjct: 166 SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 206
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
S +PE YT +++ LD IHS G +H D++ DN LL
Sbjct: 166 SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 70/189 (37%), Gaps = 53/189 (28%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTL--------------LVAGKDAH--------EA 50
+ +LRGL +IHS ++H D++ N L D H E
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 51 EISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA 105
++ + + LLL +D WA G +F EM+T + G+ L +LE I
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA--HELEQMQLILESIP 242
Query: 106 FSSE---------VPEFPSN---------------ISEDGRDFLSKCFIRVHQLRWTAKH 141
E +P + N IS + DFL + R TA+
Sbjct: 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE 302
Query: 142 VLAHPFPSV 150
L+HP+ S+
Sbjct: 303 ALSHPYMSI 311
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + E+
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL 166
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N L+ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 55/205 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHP--FPSVDE 152
HQ R TA+ + HP +P V E
Sbjct: 306 RYDHQSRLTAREAMEHPYFYPVVKE 330
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 63/201 (31%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 202
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMM--------------------- 80
+ S + + LL+ Y +D W+LG +F M+
Sbjct: 203 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 262
Query: 81 ---TAEISAWGSFGR-----------GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLS 126
T ++A+ + R G SR L+ + ++ +S + DFL
Sbjct: 263 VLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQ-----HLVSPEAIDFLD 317
Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
K HQ R TA + HP+
Sbjct: 318 KLLRYDHQERLTALEAMTHPY 338
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + A +
Sbjct: 107 EQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 182 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 237
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 298 LLRYDHQERLTALEAMTHPY 317
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 183
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 184 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 239
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 240 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 299
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 300 LLRYDHQERLTALEAMTHPY 319
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 182 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 237
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 298 LLRYDHQERLTALEAMTHPY 317
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 182 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 237
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 298 LLRYDHQERLTALEAMTHPY 317
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 183 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 238
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 239 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 298
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 299 LLRYDHQERLTALEAMTHPY 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 182 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 237
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 298 LLRYDHQERLTALEAMTHPY 317
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 183 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 238
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 239 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 298
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 299 LLRYDHQERLTALEAMTHPY 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 182 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 237
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 298 LLRYDHQERLTALEAMTHPY 317
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 47/186 (25%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG------ 60
E +I +L+GL +IHS G+VH D++ N L +D + L RH
Sbjct: 143 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTG 200
Query: 61 ------------LLLIYH----VDTWALGRVFVEMMTAE---------------ISAWGS 89
+L H VD W++G + EM+T + + G
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 260
Query: 90 FGRGLASRDDLLELIAFSSEVPEFPSN--------ISEDGRDFLSKCFIRVHQLRWTAKH 141
G + + ++ +P+ P S D L K R TA
Sbjct: 261 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 320
Query: 142 VLAHPF 147
L HPF
Sbjct: 321 ALTHPF 326
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 61/200 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AGKD 46
L +++I Y ++L+ LD+ HS G++H D++ N ++ GK+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 47 AHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y +D W+LG +F M+ + F G + D L+
Sbjct: 182 YNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK----EPFFYGHDNHDQLV 237
Query: 102 E---------------------------LIAFSSEVP--EFPSN-----ISEDGRDFLSK 127
+ L+ S P +F + +S + DFL K
Sbjct: 238 KIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDK 297
Query: 128 CFIRVHQLRWTAKHVLAHPF 147
HQ R TA + HP+
Sbjct: 298 LLRYDHQERLTALEAMTHPY 317
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 47/186 (25%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG------ 60
E +I +L+GL +IHS G+VH D++ N L +D + L RH
Sbjct: 125 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTG 182
Query: 61 ------------LLLIYH----VDTWALGRVFVEMMTAE---------------ISAWGS 89
+L H VD W++G + EM+T + + G
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 242
Query: 90 FGRGLASRDDLLELIAFSSEVPEFPSN--------ISEDGRDFLSKCFIRVHQLRWTAKH 141
G + + ++ +P+ P S D L K R TA
Sbjct: 243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 302
Query: 142 VLAHPF 147
L HPF
Sbjct: 303 ALTHPF 308
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 47/176 (26%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 220
Query: 61 --LLLIYH----VDTWALGRVFVEMMTAE---------------ISAWGSFGRGLASRDD 99
+L H VD W++G + E++T + G+ + SR
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 100 LLELIAFSSEVPEFPSNISED--------GRDFLSKCFIRVHQLRWTAKHVLAHPF 147
E + + +P+ P D D L K + R TA LAHP+
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPY 336
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 131 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 190
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 191 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 250
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 251 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 310
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 311 RYDHQSRLTAREAMEHPY 328
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 244
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 245 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 304
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 305 RYDHQSRLTAREAMEHPY 322
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 243
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 244 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 303
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 304 RYDHQSRLTAREAMEHPY 321
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 35/172 (20%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGK------ 45
+PE +G+ T I++ L ++ HG++H D++ N LL ++G+
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180
Query: 46 DAHEAEISAFLQRHGL--------LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
A +A++ + D W+LG VE+ T G F
Sbjct: 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT------GQFPYKNCKT 234
Query: 98 DDLLELIAFSSEVPEFPSNI--SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
D + E P P ++ S D + F+ C + H+ R +L H F
Sbjct: 235 DFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 185
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 246 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 305
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 306 RYDHQSRLTAREAMEHPY 323
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-EAEISAF 55
L E E R + IL G+D+ H H +VH D++ +N LL DAH A+I+ F
Sbjct: 113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADF 160
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 192
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 250
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
FP ++E RD +S+ R + VL HP+
Sbjct: 251 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 53/198 (26%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV------------------AG 44
+ L +++I Y +IL+ LD+ HS G++H D++ N ++ G
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184
Query: 45 KDAHEAEISAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAE---------ISAWGSF 90
++ + S + + LL+ Y + D W+LG + M+ +
Sbjct: 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 244
Query: 91 GRGLASRDDLLELIAFSSEV-PEFPSN--------------------ISEDGRDFLSKCF 129
+ L + D + ++ E+ P F +S + DFL K
Sbjct: 245 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 304
Query: 130 IRVHQLRWTAKHVLAHPF 147
HQ R TA+ + HP+
Sbjct: 305 RYDHQSRLTAREAMEHPY 322
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K L E Y +L + ++H +G++H D++ +N LL + ++ +I+ F L
Sbjct: 248 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 307
Query: 58 RHGLLLI--------------------YH--VDTWALGRVFVEMMTAEISAWGSFG--RG 93
L+ Y+ VD W+LG + + S + F R
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL----SGYPPFSEHRT 363
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S D + ++ +PE + +SE D + K + + R+T + L HP+
Sbjct: 364 QVSLKDQITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 416
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + A +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + A +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 169
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 227
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 228 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHG 60
L E I +++L GL+++H +G +H D++ N LL A+ +SAFL G
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 170
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHG 60
L E I +++L GL+++H +G +H D++ N LL A+ +SAFL G
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K L E Y +L + ++H +G++H D++ +N LL + ++ +I+ F L
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 58 RHGLLLI--------------------YH--VDTWALGRVFVEMMTAEISAWGSFG--RG 93
L+ Y+ VD W+LG + + S + F R
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL----SGYPPFSEHRT 224
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S D + ++ +PE + +SE D + K + + R+T + L HP+
Sbjct: 225 QVSLKDQITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K L E Y +L + ++H +G++H D++ +N LL + ++ +I+ F L
Sbjct: 108 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 167
Query: 58 RHGLLLI--------------------YH--VDTWALGRVFVEMMTAEISAWGSFG--RG 93
L+ Y+ VD W+LG + + S + F R
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL----SGYPPFSEHRT 223
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S D + ++ +PE + +SE D + K + + R+T + L HP+
Sbjct: 224 QVSLKDQITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 276
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 70/175 (40%), Gaps = 39/175 (22%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH------------ 48
+ K L E + Y +D+++G++++H ++H DI+ N L+ G+D H
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN--LLVGEDGHIKIADFGVSNEF 187
Query: 49 ---EAEIS------AFLQRHGLLLIYHV------DTWALGRVFVEMMTAEISAWGSFGRG 93
+A +S AF+ L + D WA+G + +
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 94 LASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
L S+ S+ EFP +I+ED +D +++ + + R + HP
Sbjct: 248 LHSK--------IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K L E Y +L + ++H +G++H D++ +N LL + ++ +I+ F L
Sbjct: 234 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293
Query: 58 RHGLLLI--------------------YH--VDTWALGRVFVEMMTAEISAWGSFG--RG 93
L+ Y+ VD W+LG + + S + F R
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL----SGYPPFSEHRT 349
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S D + ++ +PE + +SE D + K + + R+T + L HP+
Sbjct: 350 QVSLKDQITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K L E Y +L + ++H +G++H D++ +N LL + ++ +I+ F L
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 58 RHGLLLI--------------------YH--VDTWALGRVFVEMMTAEISAWGSFG--RG 93
L+ Y+ VD W+LG + + S + F R
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL----SGYPPFSEHRT 224
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S D + ++ +PE + +SE D + K + + R+T + L HP+
Sbjct: 225 QVSLKDQITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K L E Y +L + ++H +G++H D++ +N LL + ++ +I+ F L
Sbjct: 109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 58 RHGLLLI--------------------YH--VDTWALGRVFVEMMTAEISAWGSFG--RG 93
L+ Y+ VD W+LG + + S + F R
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL----SGYPPFSEHRT 224
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S D + ++ +PE + +SE D + K + + R+T + L HP+
Sbjct: 225 QVSLKDQITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 34/174 (19%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
K L E Y +L + ++H +G++H D++ +N LL + ++ +I+ F L
Sbjct: 115 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 174
Query: 58 RHGLLLI--------------------YH--VDTWALGRVFVEMMTAEISAWGSFG--RG 93
L+ Y+ VD W+LG + + S + F R
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL----SGYPPFSEHRT 230
Query: 94 LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
S D + ++ +PE + +SE D + K + + R+T + L HP+
Sbjct: 231 QVSLKDQITSGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 283
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 124 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 183
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 184 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 241
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 242 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 280
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 229
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 230 ------FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITAN 268
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 45/165 (27%)
Query: 20 GLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL---------------- 63
GL H+HS +VH D++ N +L++ +AH +I A + GL
Sbjct: 130 GLAHLHSLNIVHRDLKPHN-ILISMPNAH-GKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 64 -------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
Y VD ++ G VF +++ FG+ L + ++L L
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS---EGSHPFGKSLQRQANIL-LG 243
Query: 105 AFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
A S + PE ++ R+ + K Q R +AKHVL HPF
Sbjct: 244 ACSLDCLHPEKHEDVI--ARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGKD 46
A+ + E+++ R K IL G+ ++H + +VH D++ N LL ++ K
Sbjct: 125 AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
Query: 47 AHEAEISAFLQRHGLL---------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
H E+ + L + D W +G + M+ S + G ++
Sbjct: 185 GHACELREIMGTPEYLAPEILNYDPITTATDMWNIG-IIAYMLLTHTSPF----VGEDNQ 239
Query: 98 DDLLELIAFSSEVPEFP-SNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
+ L + + + E S++S+ DF+ ++ + R TA+ L+H
Sbjct: 240 ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 229
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 230 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 229
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 230 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 227
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 228 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL 167
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 225
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 226 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 168
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 226
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 227 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + ++
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 171
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 229
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 230 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + ++
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 225
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 226 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL 166
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 170
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 228
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 229 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 267
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 106 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 165
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 223
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 224 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 262
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 171
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 229
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 230 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + ++
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 28/161 (17%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRH--- 59
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 192
Query: 60 -------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
G + VD W+LG + E + + + + R +E
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 250
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
FP ++E RD +S+ R + VL HP+
Sbjct: 251 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 163
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 221
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 222 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL V + ++
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L G + VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 227
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 228 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 39/174 (22%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
+ L E E + K IL G+ ++HS + H D++ +N +L
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 42 --------VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG 93
+ G A A + GL D W++G ++T + + S G
Sbjct: 169 DFGNEFKNIFGTPAFVAPEIVNYEPLGL----EADMWSIG-----VITYILLSGASPFLG 219
Query: 94 LASRDDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
++ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 166
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 225 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 169
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 227
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 228 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A + A R L
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 168
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 226
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 227 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-VAGK-------------DAHEAEI 52
E Y ++ L + HS ++H DI+ +N LL AG+ + +
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL 167
Query: 53 SAFLQR------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
S L G + VD W+LG + E + + + + R +E
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 225
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 226 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A + A R L
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 169
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + + + R +E
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 227
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 228 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 108 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 222
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 223 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 108 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 222
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 223 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 52/191 (27%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL--- 63
E E +D+ LD +H+ G+ H D++ +N L +I F G+ L
Sbjct: 110 ELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169
Query: 64 --------------------------------IY--HVDTWALGRVFVEMMTAEISAWGS 89
IY D W+LG + +++ G
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
Query: 90 FG------RG---LASRDDLLELIAFSSEVPEFP----SNISEDGRDFLSKCFIRVHQLR 136
G RG A ++ L E I EFP ++IS +D +SK +R + R
Sbjct: 230 CGSDCGWDRGEACPACQNMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 137 WTAKHVLAHPF 147
+A VL HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 52/191 (27%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL--- 63
E E +D+ LD +H+ G+ H D++ +N L +I F G+ L
Sbjct: 110 ELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169
Query: 64 --------------------------------IY--HVDTWALGRVFVEMMTAEISAWGS 89
IY D W+LG + +++ G
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
Query: 90 FG------RG---LASRDDLLELIAFSSEVPEFP----SNISEDGRDFLSKCFIRVHQLR 136
G RG A ++ L E I EFP ++IS +D +SK +R + R
Sbjct: 230 CGSDCGWDRGEACPACQNMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQR 287
Query: 137 WTAKHVLAHPF 147
+A VL HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 28/165 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRH--- 59
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 169
Query: 60 -------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
G + VD W+LG + E + + + + R +E
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-- 227
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
FP ++E RD +S+ R + VL HP+ + +
Sbjct: 228 ------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
LPE Y L GL+++HS ++H D++ DN LL
Sbjct: 163 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLL 199
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E + K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
+ + F G ++ Y D W++G ++T + + S G +
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 223
Query: 98 DDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+ L + A + E E+ SN S +DF+ + ++ + R T + L HP
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
LPE Y L GL+++HS ++H D++ DN LL
Sbjct: 182 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLL 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
EHE+ Y +I+ L+H+H G+++ DI+ +N LL
Sbjct: 158 EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 36/150 (24%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDA--HEAEIS 53
E ++ Y ++ GLDH+HS G+++ D++ +N LL K+A HE +
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY 188
Query: 54 AF-----------LQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
+F + R G + D W+ G + EM+T + G R + +
Sbjct: 189 SFCGTVEYMAPEVVNRQG--HSHSADWWSYGVLMFEMLTGSLPFQGK------DRKETMT 240
Query: 103 LIAFSS-EVPEFPSNISEDGRDFLSKCFIR 131
LI + +P+F +S + + L F R
Sbjct: 241 LILKAKLGMPQF---LSTEAQSLLRALFKR 267
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 31/169 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK------------DAHEA 50
+ L E E ++ K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 103 ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
E + F G ++ Y D W++G ++T + + S G +
Sbjct: 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGETKQ 217
Query: 98 DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
+ L + A + + E+ SN SE +DF+ + ++ + R T L H
Sbjct: 218 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG 44
Y ++ GL+++HS G+VH DI+ N LL G
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG 145
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
LPE Y L GL+++H+ ++H D++ DN LL + D A + F
Sbjct: 161 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS--DGSRAALCDF 209
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
LPE Y L GL+++H+ ++H D++ DN LL + D A + F
Sbjct: 147 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS--DGSRAALCDF 195
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 33/172 (19%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
SA L E EI Y + L +HSH + H DI+ +N ++ + + +I F Q
Sbjct: 95 SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN-IIYQTRRSSTIKIIEFGQARQ 153
Query: 61 L------------------------LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
L ++ D W+LG V ++ + I+ + + +
Sbjct: 154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG-TLVYVLLSGINPFLA-----ET 207
Query: 97 RDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
++E I + E IS + DF+ + ++ + R TA L HP
Sbjct: 208 NQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
LPE Y L GL+++H+ ++H D++ DN LL + D A + F
Sbjct: 163 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS--DGSRAALCDF 211
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 67 VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS----NISEDGR 122
VD W+ G + ++ W R +L L S +F S + S+ +
Sbjct: 210 VDMWSTGVIMYTLLAGSPPFW--------HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 123 DFLSKCFIRVHQLRWTAKHVLAHPF 147
D +S+ + Q R+TA+ LAHPF
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 67 VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS----NISEDGR 122
VD W+ G + ++ W R +L L S +F S + S+ +
Sbjct: 210 VDMWSTGVIMYTLLAGSPPFW--------HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 123 DFLSKCFIRVHQLRWTAKHVLAHPF 147
D +S+ + Q R+TA+ LAHPF
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 66 HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS----NISEDG 121
VD W+ G + ++ W R +L L S +F S + S+
Sbjct: 196 EVDMWSTGVIMYTLLAGSPPFW--------HRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 247
Query: 122 RDFLSKCFIRVHQLRWTAKHVLAHPF 147
+D +S+ + Q R+TA+ LAHPF
Sbjct: 248 KDLVSRFLVVQPQKRYTAEEALAHPF 273
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISA 54
+GLP + + +L+GLD++HS ++H DI+ +N L+ DA+ ++A
Sbjct: 135 QGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCV-DDAYVRRMAA 186
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 68/193 (35%), Gaps = 57/193 (29%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---- 60
L E I +L+GL +IH+ G++H D++ N L +D + L R
Sbjct: 125 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVNEDCELKILDFGLARQADSEM 182
Query: 61 ------------------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
+ VD W++G + EM+T + + +G D L E
Sbjct: 183 XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK-----TLFKGSDHLDQLKE 237
Query: 103 LIAFSSEVP-EFPSNISED-------------GRDF--------------LSKCFIRVHQ 134
++ + P EF + D +DF L K + +
Sbjct: 238 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE 297
Query: 135 LRWTAKHVLAHPF 147
R TA LAHP+
Sbjct: 298 QRVTAGEALAHPY 310
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 35/162 (21%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEIS------- 53
Y +I L H+H G+++ D++ +N +L + + H+ ++
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTI 185
Query: 54 AFLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV 110
++ L+ H VD W+LG + +M+T G + + D +L+
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KTIDKILKCKL----- 238
Query: 111 PEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
P ++++ RD L K R R A V AHPF
Sbjct: 239 -NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 89 S-------FGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S G L +R+ LL L ++VP FP N D L K R
Sbjct: 248 SPSQEDLNCGINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 305
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 306 VEQALAHPY 314
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 76/207 (36%), Gaps = 63/207 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD---------------AHE 49
L + +I Y ++L+ LD+ HS G++H D++ N ++ + A E
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE 193
Query: 50 AEI---SAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y + D W+LG M+ + I F G + D L+
Sbjct: 194 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC----MLASMIFRREPFFHGQDNYDQLV 249
Query: 102 ---------ELIAFSSEV-----PEFPSNISEDGR--------------------DFLSK 127
EL + + P F + + R D L K
Sbjct: 250 RIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDK 309
Query: 128 CFIRVHQLRWTAKHVLAHP--FPSVDE 152
HQ R TAK + HP +P V E
Sbjct: 310 LLRYDHQQRLTAKEAMEHPYFYPVVKE 336
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 21/94 (22%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAHEAE-----IS 53
+ ++ IL+ LD +H + ++HCD++ +N LL G +E + I
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ 261
Query: 54 AFLQRHGLLLI-----YHVDTWALGRVFVEMMTA 82
+ R +++ +D W+LG + E++T
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 76/207 (36%), Gaps = 63/207 (30%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD---------------AHE 49
L + +I Y ++L+ LD+ HS G++H D++ N ++ + A E
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE 188
Query: 50 AEI---SAFLQRHGLLLIYHV-----DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
+ S + + LL+ Y + D W+LG M+ + I F G + D L+
Sbjct: 189 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC----MLASMIFRREPFFHGQDNYDQLV 244
Query: 102 ---------ELIAFSSEV-----PEFPSNISEDGR--------------------DFLSK 127
EL + + P F + + R D L K
Sbjct: 245 RIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDK 304
Query: 128 CFIRVHQLRWTAKHVLAHP--FPSVDE 152
HQ R TAK + HP +P V E
Sbjct: 305 LLRYDHQQRLTAKEAMEHPYFYPVVKE 331
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 35/162 (21%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEIS------- 53
Y +I L H+H G+++ D++ +N +L + + H+ ++
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTI 185
Query: 54 AFLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV 110
++ L+ H VD W+LG + +M+T G + + D +L+
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KTIDKILKCKL----- 238
Query: 111 PEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
P ++++ RD L K R R A V AHPF
Sbjct: 239 -NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 21/94 (22%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAHEAE-----IS 53
+ ++ IL+ LD +H + ++HCD++ +N LL G +E + I
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQ 261
Query: 54 AFLQRHGLLLI-----YHVDTWALGRVFVEMMTA 82
+ R +++ +D W+LG + E++T
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY- 65
Y +I+ L+++HS +V+ DI+ +N +L KD H +I+ F L + G+ + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGH-IKITDFGLCKEGISDGATMKTFC 166
Query: 66 ------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
VD W LG V EMM + + + L ELI
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILM- 219
Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP +S + + L+ + + R AK V+ H F
Sbjct: 220 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA-EISAF------LQRHGLLLI----- 64
I + ++++HS G+VH D++ N L V E I F +GLL+
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 65 --------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLA-SRDDLLELIA---F 106
D W+LG + M+ + + F G + + +++L I F
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTML----AGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 107 SSEVPEFPSNISEDGRDFLSKCF-IRVHQLRWTAKHVLAHPF 147
+ + + +SE +D +SK + HQ R TAK VL HP+
Sbjct: 246 TLSGGNW-NTVSETAKDLVSKMLHVDPHQ-RLTAKQVLQHPW 285
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA-EISAF------LQRHGLLLI----- 64
I + ++++HS G+VH D++ N L V E I F +GLL+
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA 189
Query: 65 --------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLA-SRDDLLELIA---F 106
D W+LG + M+ + + F G + + +++L I F
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTML----AGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 107 SSEVPEFPSNISEDGRDFLSKCF-IRVHQLRWTAKHVLAHPF 147
+ + + +SE +D +SK + HQ R TAK VL HP+
Sbjct: 246 TLSGGNW-NTVSETAKDLVSKMLHVDPHQ-RLTAKQVLQHPW 285
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 29/98 (29%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAHEAE-ISAFLQ 57
+ ++ IL+ LD +H + ++HCD++ +N LL G +E + + +Q
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ 261
Query: 58 -------------RHGLLLIYHVDTWALGRVFVEMMTA 82
R+G+ +D W+LG + E++T
Sbjct: 262 SRFYRAPEVILGARYGM----PIDMWSLGCILAELLTG 295
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 28/161 (17%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL 170
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + R +E
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-- 228
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
FP ++E RD +S+ R T VL HP+
Sbjct: 229 ------FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY- 65
Y +I+ L+++HS +V+ DI+ +N +L KD H +I+ F L + G+ + +
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGH-IKITDFGLCKEGISDGATMKTFC 169
Query: 66 ------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
VD W LG V EMM + + + L ELI
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILM- 222
Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP +S + + L+ + + R AK V+ H F
Sbjct: 223 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY- 65
Y +I+ L+++HS +V+ DI+ +N +L KD H +I+ F L + G+ + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGH-IKITDFGLCKEGISDGATMKTFC 166
Query: 66 ------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
VD W LG V EMM + + + L ELI
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILM- 219
Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP +S + + L+ + + R AK V+ H F
Sbjct: 220 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 29/158 (18%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF---LQRHGLLLIYH----- 66
+ IL ++H H +G+VH D++ +N LL + +++ F ++ G +
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 67 -----------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE 109
VD WA G + ++ W L + ++ A+
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ---IKAGAYDFP 226
Query: 110 VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
PE+ ++ + +D ++K R TA L HP+
Sbjct: 227 SPEW-DTVTPEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 29/158 (18%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF---LQRHGLLLIYH----- 66
+ IL ++H H +G+VH D++ +N LL + +++ F ++ G +
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 67 -----------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE 109
VD WA G + ++ W L + ++ A+
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ---IKAGAYDFP 226
Query: 110 VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
PE+ ++ + +D ++K R TA L HP+
Sbjct: 227 SPEW-DTVTPEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 28/161 (17%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE----ISAFLQRHGLL 62
E Y ++ L + HS ++H DI+ +N LL + + A+ + A R L
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL 170
Query: 63 ---LIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
L Y VD W+LG + E + + R +E
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-- 228
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
FP ++E RD +S+ R T VL HP+
Sbjct: 229 ------FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHG-LVHCDIQGDNTLL 41
+GLP + + + +L+GLD++H+ ++H DI+ +N LL
Sbjct: 125 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.7 bits (73), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 99 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.7 bits (73), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.7 bits (73), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY- 65
Y +I+ L+++HS +V+ DI+ +N +L KD H +I+ F L + G+ + +
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGH-IKITDFGLCKEGISDGATMKXFC 171
Query: 66 ------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
VD W LG V EMM + + + L ELI
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILM- 224
Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP +S + + L+ + + R AK V+ H F
Sbjct: 225 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.7 bits (73), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHG-LVHCDIQGDNTLL 41
+GLP + + + +L+GLD++H+ ++H DI+ +N LL
Sbjct: 141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY- 65
Y +I+ L+++HS +V+ DI+ +N +L KD H +I+ F L + G+ + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGH-IKITDFGLCKEGISDGATMKXFC 166
Query: 66 ------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
VD W LG V EMM + + + L ELI
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILM- 219
Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP +S + + L+ + + R AK V+ H F
Sbjct: 220 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 30/143 (20%)
Query: 12 RYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--EAEISAFLQRHGLLLIYHV-- 67
+T IL G+ H H +VH DI+ N L+ + K + I+ L L HV
Sbjct: 115 NFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 68 -------------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS 108
D +++G V EM+ E G +A +
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK-------HIQD 227
Query: 109 EVPEFPSNISEDGRDFLSKCFIR 131
VP +++ +D LS +R
Sbjct: 228 SVPNVTTDVRKDIPQSLSNVILR 250
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.3 bits (72), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLL 41
+G+P + + +K +L GLD++H G++H DI+ +N L+
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.3 bits (72), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 25/107 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEIS 85
LL L Y VD W+ G V M+ E+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
YT +I+ L+++H G++H D++ +N LL +D H
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILL--NEDMH 147
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY- 65
Y +I+ L+++HS +V+ DI+ +N +L KD H +I+ F L + G+ + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGH-IKITDFGLCKEGISDGATMKXFC 166
Query: 66 ------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
VD W LG V EMM + + + L ELI
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILM- 219
Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP +S + + L+ + + R AK V+ H F
Sbjct: 220 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLL 41
+G+P + + +K +L GLD++H G++H DI+ +N L+
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY- 65
Y +I+ L+++HS +V+ DI+ +N +L KD H +I+ F L + G+ + +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGH-IKITDFGLCKEGISDGATMKXFC 166
Query: 66 ------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
VD W LG V EMM + + + L ELI
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILM- 219
Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP +S + + L+ + + R AK V+ H F
Sbjct: 220 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.3 bits (72), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 25/106 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQR 58
G+PE + R+ ++ G+ ++H G+ H DI+ +N LL + D A + + R
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 59 HGLL------LIY--------------HVDTWALGRVFVEMMTAEI 84
LL L Y VD W+ G V M+ E+
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.3 bits (72), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
YT +I+ L+++H G++H D++ +N LL +D H
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILL--NEDMH 148
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
YT +I+ L+++H G++H D++ +N LL +D H
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILL--NEDMH 146
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 59/201 (29%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAE-------------------- 83
S R G D W++G VEM
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
Query: 84 ----------------ISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLS 126
+S++G R + +LL+ I + P+ PS + S + +DF++
Sbjct: 221 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVN 279
Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
KC I+ R K ++ H F
Sbjct: 280 KCLIKNPAERADLKQLMVHAF 300
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILL 165
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
YT +I+ L+++H G++H D++ +N LL +D H
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILL--NEDMH 145
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + +L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILL 163
>pdb|1A9X|B Chain B, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|D Chain D, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|F Chain F, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
pdb|1A9X|H Chain H, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
Length = 379
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 14 TKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALG 73
T D +H+ GLV D+ L+A + ++S++L+RH ++ I +DT L
Sbjct: 64 TNDADEESSQVHAQGLVIRDLP-----LIASNFRNTEDLSSYLKRHNIVAIADIDTRKLT 118
Query: 74 RVFVE 78
R+ E
Sbjct: 119 RLLRE 123
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|1C30|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C30|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
pdb|1C3O|B Chain B, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|D Chain D, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|F Chain F, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
pdb|1C3O|H Chain H, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
Length = 382
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 14 TKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALG 73
T D +H+ GLV D+ L+A + ++S++L+RH ++ I +DT L
Sbjct: 65 TNDADEESSQVHAQGLVIRDLP-----LIASNFRNTEDLSSYLKRHNIVAIADIDTRKLT 119
Query: 74 RVFVE 78
R+ E
Sbjct: 120 RLLRE 124
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 59/201 (29%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAE-------------------- 83
S R G D W++G VEM
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
Query: 84 ----------------ISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLS 126
+S++G R + +LL+ I + P+ PS + S + +DF++
Sbjct: 221 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVN 279
Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
KC I+ R K ++ H F
Sbjct: 280 KCLIKNPAERADLKQLMVHAF 300
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 59/201 (29%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAE-------------------- 83
S R G D W++G VEM
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
Query: 84 ----------------ISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLS 126
+S++G R + +LL+ I + P+ PS + S + +DF++
Sbjct: 221 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVN 279
Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
KC I+ R K ++ H F
Sbjct: 280 KCLIKNPAERADLKQLMVHAF 300
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAFL 56
+I R T +G+D++H+ ++H D++ +N L +A + + + F
Sbjct: 108 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 219
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 220 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 59/201 (29%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAE-------------------- 83
S R G D W++G VEM
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
Query: 84 ----------------ISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLS 126
+S++G R + +LL+ I + P+ PS + S + +DF++
Sbjct: 221 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVN 279
Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
KC I+ R K ++ H F
Sbjct: 280 KCLIKNPAERADLKQLMVHAF 300
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILL 168
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILL 166
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 116 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 156
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILL 166
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILL 165
>pdb|1T36|B Chain B, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|D Chain D, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|F Chain F, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
pdb|1T36|H Chain H, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
Length = 382
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 14 TKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALG 73
T D +H+ GLV D+ L+A + ++S++L+RH ++ I +DT L
Sbjct: 65 TNDADEESSQVHAQGLVIRDLP-----LIASNFRNTEDLSSYLKRHNIVAIADIDTRKLT 119
Query: 74 RVFVE 78
R+ E
Sbjct: 120 RLLRE 124
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILL 163
>pdb|1CS0|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1CS0|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
pdb|1KEE|B Chain B, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|D Chain D, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|F Chain F, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
pdb|1KEE|H Chain H, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
Length = 382
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 14 TKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALG 73
T D +H+ GLV D+ L+A + ++S++L+RH ++ I +DT L
Sbjct: 65 TNDADEESSQVHAQGLVIRDLP-----LIASNFRNTEDLSSYLKRHNIVAIADIDTRKLT 119
Query: 74 RVFVE 78
R+ E
Sbjct: 120 RLLRE 124
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILL 165
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILL 165
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILL 163
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILL 165
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILL 165
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILL 170
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
YT +I+ L+++H G++H D++ +N LL +D H
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILL--NEDMH 167
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
YT +I+ L+++H G++H D++ +N LL +D H
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILL--NEDMH 167
>pdb|1M6V|B Chain B, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|D Chain D, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|F Chain F, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
pdb|1M6V|H Chain H, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
Length = 382
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 14 TKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALG 73
T D +H+ GLV D+ L+A + ++S++L+RH ++ I +DT L
Sbjct: 65 TNDADEESSQVHAQGLVIRDLP-----LIASNFRNTEDLSSYLKRHNIVAIADIDTRKLT 119
Query: 74 RVFVE 78
R+ E
Sbjct: 120 RLLRE 124
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 28/135 (20%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVAG--KDAHEAEIS 53
YT I+ GL+H+H +++ D++ +N L L AG K A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 54 AFLQRHGLL---LIYHVDTWALGRVFVEMMTAEISAWGSF-GRGLASRDDLLELIAFSSE 109
F+ LL + VD +ALG EM I+A G F RG + L+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEM----IAARGPFRARGEKVENKELKQRVLEQA 409
Query: 110 VPEFPSNISEDGRDF 124
V +P S +DF
Sbjct: 410 V-TYPDKFSPASKDF 423
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
YT +I+ L+++H G++H D++ +N LL
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILL 163
>pdb|1JDB|C Chain C, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|F Chain F, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|I Chain I, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1JDB|L Chain L, Carbamoyl Phosphate Synthetase From Escherichia Coli
pdb|1BXR|B Chain B, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|D Chain D, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|F Chain F, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1BXR|H Chain H, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
pdb|1CE8|B Chain B, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|D Chain D, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|F Chain F, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
pdb|1CE8|H Chain H, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
Length = 382
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 14 TKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALG 73
T D +H+ GLV D+ L+A + ++S++L+RH ++ I +DT L
Sbjct: 65 TNDADEESSQVHAQGLVIRDLP-----LIASNFRNTEDLSSYLKRHNIVAIADIDTRKLT 119
Query: 74 RVFVE 78
R+ E
Sbjct: 120 RLLRE 124
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 28/135 (20%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVAG--KDAHEAEIS 53
YT I+ GL+H+H +++ D++ +N L L AG K A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 54 AFLQRHGLL---LIYHVDTWALGRVFVEMMTAEISAWGSF-GRGLASRDDLLELIAFSSE 109
F+ LL + VD +ALG EM I+A G F RG + L+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEM----IAARGPFRARGEKVENKELKQRVLEQA 409
Query: 110 VPEFPSNISEDGRDF 124
V +P S +DF
Sbjct: 410 V-TYPDKFSPASKDF 423
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
YT +I+ L+++H G++H D++ +N LL +D H
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILL--NEDMH 152
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAFL 56
+I R T +G+D++H+ ++H D++ +N L +A + + + F
Sbjct: 128 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 239
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 240 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 285
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 28/135 (20%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVAG--KDAHEAEIS 53
YT I+ GL+H+H +++ D++ +N L L AG K A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 54 AFLQRHGLL---LIYHVDTWALGRVFVEMMTAEISAWGSF-GRGLASRDDLLELIAFSSE 109
F+ LL + VD +ALG EM I+A G F RG + L+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEM----IAARGPFRARGEKVENKELKQRVLEQA 409
Query: 110 VPEFPSNISEDGRDF 124
V +P S +DF
Sbjct: 410 V-TYPDKFSPASKDF 423
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 38/152 (25%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
+PE + +Y + L+H+HS ++H DI+ N + A ++ S
Sbjct: 133 IPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192
Query: 58 RHGLL---------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
H L+ + D W+LG + EM + +G D +
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG----------DKMN 242
Query: 103 LIAFSSEV-----PEFPSN-ISEDGRDFLSKC 128
L + ++ P PS+ SE+ R ++ C
Sbjct: 243 LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMC 274
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 28/135 (20%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVAG--KDAHEAEIS 53
YT I+ GL+H+H +++ D++ +N L L AG K A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 54 AFLQRHGLL---LIYHVDTWALGRVFVEMMTAEISAWGSF-GRGLASRDDLLELIAFSSE 109
F+ LL + VD +ALG EM I+A G F RG + L+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEM----IAARGPFRARGEKVENKELKQRVLEQA 409
Query: 110 VPEFPSNISEDGRDF 124
V +P S +DF
Sbjct: 410 V-TYPDKFSPASKDF 423
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 119 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 159
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 134 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 174
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 28/127 (22%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL------------------LV 42
+ + LP + Y + R L +IHS G+ H DI+ N L LV
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
Query: 43 AGKDAHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
G+ S + + L+ +D W+ G V E++ + G G
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-----V 241
Query: 98 DDLLELI 104
D L+E+I
Sbjct: 242 DQLVEII 248
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAFL 56
+I R T +G+D++H+ ++H D++ +N L +A + + + F
Sbjct: 136 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 247
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 248 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 167
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 128 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 168
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 123 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 163
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 32/166 (19%)
Query: 6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEIS 53
P+H I + IL GL +H G+VH D+ N LL +A +D +A +
Sbjct: 133 PQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
Query: 54 AF------------LQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGS-FGRGLASRDDL 100
+ +Q G + VD W+ G V EM + GS F L + +
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKL--VDMWSAGCVMAEMFNRKALFRGSTFYNQL---NKI 246
Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+E++ + ++ + S RD+L V WTA A P
Sbjct: 247 VEVVG-TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADP 291
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 59/201 (29%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 222
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAE-------------------- 83
S R G D W++G VEM
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 282
Query: 84 ----------------ISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLS 126
+S++G R + +LL+ I + P+ PS + S + +DF++
Sbjct: 283 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSAVFSLEFQDFVN 341
Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
KC I+ R K ++ H F
Sbjct: 342 KCLIKNPAERADLKQLMVHAF 362
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + A L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 32/166 (19%)
Query: 6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEIS 53
P+H I + IL GL +H G+VH D+ N LL +A +D +A +
Sbjct: 133 PQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
Query: 54 AF------------LQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGS-FGRGLASRDDL 100
+ +Q G + VD W+ G V EM + GS F L + +
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKL--VDMWSAGCVMAEMFNRKALFRGSTFYNQL---NKI 246
Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
+E++ + ++ + S RD+L V WTA A P
Sbjct: 247 VEVVG-TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADP 291
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 120 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 160
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 143 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 183
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
I +G+D+IHS L+H D++ N LV D + +I F
Sbjct: 145 ITKGVDYIHSKKLIHRDLKPSNIFLV---DTKQVKIGDF 180
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-EAEISAF 55
E E R + IL +D+ H H +VH D++ +N LL DAH A+I+ F
Sbjct: 110 EMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADF 155
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.0 bits (71), Expect = 0.15, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLL 41
K IL G+ ++H H +VH DI+ +N LL
Sbjct: 153 KQILSGICYLHKHNIVHRDIKPENILL 179
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-EAEISAF 55
E E R + IL +D+ H H +VH D++ +N LL DAH A+I+ F
Sbjct: 110 EMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADF 155
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 28/127 (22%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL------------------LV 42
+ + LP + Y + R L +IHS G+ H DI+ N L LV
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
Query: 43 AGKDAHEAEISAFLQRHGLLL-----IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
G+ S + + L+ +D W+ G V E++ + G G
Sbjct: 209 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-----V 263
Query: 98 DDLLELI 104
D L+E+I
Sbjct: 264 DQLVEII 270
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 307
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 308 VEQALAHPY 316
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 151 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 191
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 307
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 308 VEQALAHPY 316
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 246 SPSQEDLNXIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 303
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 304 VEQALAHPY 312
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 246 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 303
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 304 VEQALAHPY 312
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 153 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 193
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 266 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 323
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 324 VEQALAHPY 332
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 27/156 (17%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLL---------------------VAGKDAHEAEIS 53
K +L G ++H H +VH D++ +N LL V GK +
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 54 AFLQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP 111
++ L Y D W+ G + ++ G + + R +E FS + P
Sbjct: 188 YYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR---VEKGKFSFDPP 244
Query: 112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
++ + +S++ + + R +A+ L HP+
Sbjct: 245 DW-TQVSDEAKQLVKLMLTYEPSKRISAEEALNHPW 279
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FL 56
+I R T +G+D++H+ ++H D++ +N L V D A + + F
Sbjct: 108 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 219
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 220 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FL 56
+I R T +G+D++H+ ++H D++ +N L V D A + + F
Sbjct: 108 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 219
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 220 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FL 56
+I R T +G+D++H+ ++H D++ +N L V D A + + F
Sbjct: 113 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 224
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 225 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ LPE Y+ +I L+++H G+++ D++ DN LL
Sbjct: 116 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 154
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FL 56
+I R T +G+D++H+ ++H D++ +N L V D A + + F
Sbjct: 113 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 224
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 225 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FL 56
+I R T +G+D++H+ ++H D++ +N L V D A + + F
Sbjct: 110 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 221
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 222 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 267
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ LPE Y+ +I L+++H G+++ D++ DN LL
Sbjct: 101 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 139
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 246 SPSQEDLNXIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 303
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 304 VEQALAHPY 312
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E ++ K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 110 ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 169
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
E + F G ++ Y D W++G ++T + + S G +
Sbjct: 170 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGETKQ 224
Query: 98 DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
+ L + A + + E+ SN SE +DF+ + ++ + R L H
Sbjct: 225 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEH 273
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ LPE Y+ +I L+++H G+++ D++ DN LL
Sbjct: 148 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 186
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FL 56
+I R T +G+D++H+ ++H D++ +N L V D A + + F
Sbjct: 135 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 246
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 247 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 38/166 (22%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA-------FL 56
+I R T +G+D++H+ ++H D++ +N L V D A + + F
Sbjct: 136 DIARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 57 QRHGLLL---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
Q G +L + D +A G V E+MT ++ + +RD ++
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-----SNINNRDQII 247
Query: 102 ELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
++ S ++ + SN + + +++C + R +LA
Sbjct: 248 FMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 26/104 (25%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL 62
+ LPE Y+ +I L+++H G+++ D++ DN LL + H + + GL
Sbjct: 105 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLR 162
Query: 63 ------------------------LIYHVDTWALGRVFVEMMTA 82
+ VD WALG + EMM
Sbjct: 163 PGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 29/156 (18%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF---LQRHGLLLIYH------- 66
IL ++HIH H +VH D++ +N LL + +++ F ++ G +
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPG 198
Query: 67 ---------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP 111
VD WA G + ++ W L + ++ A+ P
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ---IKAGAYDFPSP 255
Query: 112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
E+ ++ + ++ +++ R TA L HP+
Sbjct: 256 EW-DTVTPEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
E ++ Y ++ LDH+HS G+++ D++ +N LL
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
+ L E E ++ K IL G+ ++HS + H D++ +N +L+ AH+
Sbjct: 124 ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
Query: 51 EI-SAFLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
E + F G ++ Y D W++G ++T + + S G +
Sbjct: 184 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGETKQ 238
Query: 98 DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
+ L + A + + E+ SN SE +DF+ + ++ + R L H
Sbjct: 239 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEH 287
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
+ LP E Y +IL L ++HS GLV+ D++ +N +L
Sbjct: 176 GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 307
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 308 VEQALAHPY 316
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 251 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 308
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 309 VEQALAHPY 317
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 251
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 252 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 309
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 310 VEQALAHPY 318
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 242
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 243 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 300
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 301 VEQALAHPY 309
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 307
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 308 VEQALAHPY 316
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 266 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 323
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 324 VEQALAHPY 332
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 248 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 305
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 306 VEQALAHPY 314
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 307
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 308 VEQALAHPY 316
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 246 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 303
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 304 VEQALAHPY 312
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 248 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 305
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 306 VEQALAHPY 314
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 253
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 254 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 311
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 312 VEQALAHPY 320
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 246 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 303
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 304 VEQALAHPY 312
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
E ++ Y ++ LDH+HS G+++ D++ +N LL
Sbjct: 126 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 160
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
E ++ Y ++ LDH+HS G+++ D++ +N LL
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 244 SPSQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 301
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 302 VEQALAHPY 310
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF------- 55
+ E E +DI + +HSH + H D++ +N L + + +++ F
Sbjct: 123 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
Query: 56 ---LQRHGLLLIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLAS-RD 98
LQ Y D W+LG + ++ + + G+ ++
Sbjct: 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK 242
Query: 99 DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+ L + PE+ S +SED + + R T + HP+
Sbjct: 243 RRIRLGQYGFPNPEW-SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 41/178 (23%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA-EISAF------ 55
K E E I + ++++H+ G+VH D++ N L V E+ I F
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 56 LQRHGLLLI-------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
+GLL+ D W+LG + M+T + F G
Sbjct: 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT----GYTPFANG--- 223
Query: 97 RDDLLELIAFSSEVPEFP------SNISEDGRDFLSKCF-IRVHQLRWTAKHVLAHPF 147
DD E I +F +++S+ +D +SK + HQ R TA VL HP+
Sbjct: 224 PDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQ-RLTAALVLRHPW 280
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF------- 55
+ E E +DI + +HSH + H D++ +N L + + +++ F
Sbjct: 104 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 163
Query: 56 ---LQRHGLLLIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLAS-RD 98
LQ Y D W+LG + ++ + + G+ ++
Sbjct: 164 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK 223
Query: 99 DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+ L + PE+ S +SED + + R T + HP+
Sbjct: 224 RRIRLGQYGFPNPEW-SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 271
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 30.8 bits (68), Expect = 0.30, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ + LP + Y + R L +IHS G+ H DI+ N LL
Sbjct: 194 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 234
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ E E R+ + I+ +++ H H +VH D++ +N LL
Sbjct: 110 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 146
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ E E R+ + I+ +++ H H +VH D++ +N LL
Sbjct: 109 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ E E R+ + I+ +++ H H +VH D++ +N LL
Sbjct: 100 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 136
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ E E R+ + I+ +++ H H +VH D++ +N LL
Sbjct: 104 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 140
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNT 39
++ L + + +LRGL +IHS G++H D++ N
Sbjct: 125 SQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV 162
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 24/102 (23%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFL 56
LP + R+ DI G++++ S +H D+ N +L A+ S
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 57 QRHGL-----------------LLIYHVDTWALGRVFVEMMT 81
R G L H D WA G E+MT
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 66/189 (34%), Gaps = 53/189 (28%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------------SAFLQ 57
I + ILRGL +IHS ++H D++ N LL D + + FL
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 58 RHGLLLIYH--------------VDTWALGRVFVEMMTAE---------------ISAWG 88
+ Y +D W++G + EM++ + G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 89 SFGR-------GLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWT 138
S + L +R+ LL L ++VP FP N D L K R
Sbjct: 244 SPEQEDLNCIINLKARNYLLSL-PHKNKVPWNRLFP-NADSKALDLLDKMLTFNPHKRIE 301
Query: 139 AKHVLAHPF 147
+ LAHP+
Sbjct: 302 VEQALAHPY 310
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
Y +I+ +D +H G VH DI+ DN LL
Sbjct: 167 YLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL 41
AK +PE +G+ + +LRGL ++ H ++H D++ N L+
Sbjct: 108 AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV 148
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNT 39
+LRGL +IHS G++H D++ N
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNV 154
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 67/189 (35%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + + F+ ++ Y+
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAP 192
Query: 67 -----------VDTWALGRVFVEMM--------TAEISAWGSFGR--GLASRDDLLEL-- 103
VD W++G + E++ T I W G S + + L
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 252
Query: 104 --------------IAFSSEVPE--FPSNISED------GRDFLSKCFIRVHQLRWTAKH 141
IAF P+ FPS D RD LSK + R +
Sbjct: 253 TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 312
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 313 ALRHPYITV 321
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNT 39
+LRGL +IHS G++H D++ N
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNV 162
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 31/146 (21%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISA 54
E + + +++ LD++ + ++H D++ DN LL +A E +I+
Sbjct: 114 EETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173
Query: 55 ------------FLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
F R G + VD W+LG E++ G + S E
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR------GRRPYHIRSSTSSKE 227
Query: 103 LI-AFSSEVPEFPSNISEDGRDFLSK 127
++ F + V +PS S++ L K
Sbjct: 228 IVHTFETTVVTYPSAWSQEMVSLLKK 253
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD 46
I + ILRGL +IHS ++H D++ N LL D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 166
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD 46
I + ILRGL +IHS ++H D++ N LL D
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 167
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D+ + L RH
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D+ + L RH
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 30.0 bits (66), Expect = 0.52, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 32/171 (18%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------VAGKDAHEAEISA 54
G PE Y +I GL+ +H +V+ D++ +N LL G H E
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 55 FLQRHGLL------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
R G + + D WALG + EM+ + S + + + R+++
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ-SPFQQRKKKI-KREEVER 399
Query: 103 LIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
L+ EVP E+ S R S+ + R +A+ V HP
Sbjct: 400 LV---KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 30.0 bits (66), Expect = 0.52, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 32/171 (18%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------VAGKDAHEAEISA 54
G PE Y +I GL+ +H +V+ D++ +N LL G H E
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 55 FLQRHGLL------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
R G + + D WALG + EM+ + S + + + R+++
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ-SPFQQRKKKI-KREEVER 399
Query: 103 LIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
L+ EVP E+ S R S+ + R +A+ V HP
Sbjct: 400 LV---KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K + E E R+ + I+ +++ H H +VH D++ +N LL
Sbjct: 103 KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL 141
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 59/201 (29%)
Query: 5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
+PE +G+ + +++GL ++ H ++H D++ N L+ V+G+
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187
Query: 52 ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAE-------------------- 83
S R G D W++G VEM
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 247
Query: 84 ----------------ISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLS 126
++ +G R + +LL+ I + P+ PS + S + +DF++
Sbjct: 248 GDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVN 306
Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
KC I+ R K ++ H F
Sbjct: 307 KCLIKNPAERADLKQLMVHAF 327
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD 46
++ L I + ILRGL +IHS ++H D++ N L+ D
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD 182
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
I +G+D+IHS L++ D++ N LV D + +I F
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDF 166
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 26/88 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHG--------------- 60
ILRGL +IHS ++H D++ N L +D E +I F L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDC-ELKILGFGLARHTDDEMTGYVATRWYRA 190
Query: 61 ---LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 11/152 (7%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF---LQRH 59
+ E E K I + ++HS + H D++ +N L + + +++ F +
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFG----RGLASRDDLLELIAFSSEVPEFPS 115
G D W+LG + ++ + + G G+ +R + + + PE+ S
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR---IRMGQYEFPNPEW-S 227
Query: 116 NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
+SE+ + + R T + HP+
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 26/88 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHG--------------- 60
ILRGL +IHS ++H D++ N +A + E +I F L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 61 ---LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.6 bits (65), Expect = 0.68, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLL 41
K +L G ++H H +VH D++ +N LL
Sbjct: 111 KQVLSGTTYLHKHNIVHRDLKPENLLL 137
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYVATRWYRAP 198
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 198
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 190
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYVATRWYRAP 198
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAP 214
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 189
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1VZ0|A Chain A, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
pdb|1VZ0|B Chain B, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
pdb|1VZ0|C Chain C, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
pdb|1VZ0|D Chain D, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
pdb|1VZ0|E Chain E, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
pdb|1VZ0|F Chain F, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
pdb|1VZ0|G Chain G, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
pdb|1VZ0|H Chain H, Chromosome Segregation Protein Spo0j From Thermus
Thermophilus
Length = 230
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 6 PEHEIGRYTKDILRGL-DHIHSHGLVH---CDIQGDNTLLVAGKDAHEAEISAFLQRHGL 61
P R+ ++ L+ L D I GL+ QGD LVAG+ + A + A LQ
Sbjct: 35 PRQPRKRFAEESLKELADSIREKGLLQPLLVRPQGDGYELVAGERRYRAALMAGLQEVPA 94
Query: 62 LLIYHVDTWALGRVFVEMMTAE 83
++ D AL VE + E
Sbjct: 95 VVKDLTDREALELALVENLQRE 116
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 202
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 26/88 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHG--------------- 60
ILRGL +IHS ++H D++ N +A + E +I F L RH
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 61 ---LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAP 187
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-------------LVAGKDA 47
S++ L + + +LRGL ++HS ++H D++ N L + G
Sbjct: 152 SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 211
Query: 48 HEAEISAFLQRH---------GLLLIYH-----VDTWALGRVFVEMMT 81
AE F+ + L+L H +D W++G +F EM+
Sbjct: 212 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 26/88 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHG--------------- 60
ILRGL +IHS ++H D++ N +A + E +I F L RH
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 61 ---LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYVATRWYRAP 198
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 201
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 26/88 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHG--------------- 60
ILRGL +IHS ++H D++ N +A + E +I F L RH
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 61 ---LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
P H I Y L+GL+++H H ++H D++ +N LL
Sbjct: 111 PSH-IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL 145
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 214
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-------------LVAGKDA 47
S++ L + + +LRGL ++HS ++H D++ N L + G
Sbjct: 151 SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210
Query: 48 HEAEISAFLQRH---------GLLLIYH-----VDTWALGRVFVEMMT 81
AE F+ + L+L H +D W++G +F EM+
Sbjct: 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 29/160 (18%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF---LQRHGLLLIYH----- 66
+ IL + H H G+VH D++ +N LL + +++ F ++ G +
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 187
Query: 67 -----------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE 109
VD WA G + ++ W L + ++ A+
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ---IKAGAYDFP 244
Query: 110 VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
PE+ ++ + +D ++K R TA L HP+ S
Sbjct: 245 SPEW-DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAP 211
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 32/154 (20%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF------- 55
K E E + ++ + H+H G+VH D++ +N L D E +I F
Sbjct: 101 KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160
Query: 56 -----LQRHGLLLIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGL--A 95
L+ L Y D W+LG + M++ ++ + S R L
Sbjct: 161 PDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQV-PFQSHDRSLTCT 219
Query: 96 SRDDLLELIA---FSSEVPEFPSNISEDGRDFLS 126
S ++++ I FS E E N+S++ +D +
Sbjct: 220 SAVEIMKKIKKGDFSFE-GEAWKNVSQEAKDLIQ 252
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D+ + L RH
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN--LAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAP 191
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 66/189 (34%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + + F+ ++ Y+
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAP 194
Query: 67 -----------VDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
VD W++G + E++ T I W G S + + L
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 254
Query: 104 --------------IAFSSEVPE--FPSNISED------GRDFLSKCFIRVHQLRWTAKH 141
I F P+ FPS D RD LSK + R +
Sbjct: 255 TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALRHPYITV 323
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL 40
E+ Y ++ + L IH G+VH D++ N L
Sbjct: 117 QEVREYMLNLFKALKRIHQFGIVHRDVKPSNFL 149
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE 51
+ KDI G+ ++HS ++H D+ N L+ K+ A+
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVAD 151
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVD 68
E R + IL L +IHS G++H D++ N + ++ + H L I +D
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 69 TWAL 72
+ L
Sbjct: 177 SQNL 180
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 31/107 (28%)
Query: 67 VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-----------SSEVPEFPS 115
+D W++G +F EM+ G++ D L+ + +E+P++
Sbjct: 182 IDIWSVGCIFAEMVNG-----APLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 116 NIS---------------EDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
N + E G D LSK R TAK L H +
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVD 68
E R + IL L +IHS G++H D++ N + ++ + H L I +D
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 69 TWAL 72
+ L
Sbjct: 177 SQNL 180
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 51/182 (28%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL----------------------- 41
LPE Y +++ +D +H VH DI+ DN L+
Sbjct: 172 LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231
Query: 42 -----VAGKDAHEAEISAFLQ----RHGLLLIYHVDTWALGRVFVEMMTAEISAWG---- 88
V D EI ++ R+G D W+LG EM+ E +
Sbjct: 232 QSSVAVGTPDYISPEILQAMEGGKGRYGP----ECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 89 -SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFI-RVHQLRWTA-KHVLAH 145
++G+ + + E F ++V +++SE+ +D + + R H+L + H
Sbjct: 288 ETYGKIMNHK----ERFQFPTQV----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339
Query: 146 PF 147
PF
Sbjct: 340 PF 341
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 24/87 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------- 60
ILRGL +IHS ++H D++ N L +D + L RH
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 61 --LLLIYH----VDTWALGRVFVEMMT 81
+L H VD W++G + E++T
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 15 KDIL----RGLDHIHSHGLVHCDIQGDNTLL 41
KD+L RGL +IHS LVH DI+ N +
Sbjct: 114 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 42/166 (25%)
Query: 13 YTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY 65
Y +I+ LD++HS +V+ D++ +N +L KD H +I+ F L + G+ + +
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLML--DKDGH-IKITDFGLCKEGIKDGATMKTF 312
Query: 66 -------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
VD W LG V EMM + + + L ELI
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM 366
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP + + + LS + + R AK ++ H F
Sbjct: 367 --EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 410
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 42/166 (25%)
Query: 13 YTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL-----LLIY 65
Y +I+ LD++HS +V+ D++ +N +L KD H +I+ F L + G+ + +
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLML--DKDGH-IKITDFGLCKEGIKDGATMKTF 309
Query: 66 -------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
VD W LG V EMM + + + L ELI
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM 363
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP + + + LS + + R AK ++ H F
Sbjct: 364 --EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 15 KDIL----RGLDHIHSHGLVHCDIQGDNTLL 41
KD+L RGL +IHS LVH DI+ N +
Sbjct: 116 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 21/32 (65%)
Query: 14 TKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK 45
++I++G+ ++H+ G++H D++ N GK
Sbjct: 136 AQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK 167
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 15 KDIL----RGLDHIHSHGLVHCDIQGDNTLL 41
KD+L RGL +IHS LVH DI+ N +
Sbjct: 116 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 15 KDIL----RGLDHIHSHGLVHCDIQGDNTLL 41
KD+L RGL +IHS LVH DI+ N +
Sbjct: 118 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 40/165 (24%)
Query: 13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL---------- 62
Y +I+ L +H G+++ D++ DN LL + H + + G+
Sbjct: 129 YAAEIISALMFLHDKGIIYRDLKLDNVLL--DHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 63 ------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS 108
++Y VD WA+G + EM+ + DDL E I
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE------NEDDLFEAILNDE 240
Query: 109 EVPEFPSNISEDG----RDFLSKC-FIRVHQLRWTAKH-VLAHPF 147
V +P+ + ED + F++K +R+ L +H +L HPF
Sbjct: 241 VV--YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 58/156 (37%), Gaps = 31/156 (19%)
Query: 16 DILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLLLIY-------- 65
I +G+ ++ HG+VH ++ N LL + A+ ++ L L+Y
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 66 --------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP 111
D W+ G E+MT + G LA DLLE E
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA--GLRLAEVPDLLE----KGERL 254
Query: 112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
P + D + KC++ +R T K LA+ F
Sbjct: 255 AQPQICTIDVYMVMVKCWMIDENIRPTFKE-LANEF 289
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 58/156 (37%), Gaps = 31/156 (19%)
Query: 16 DILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLLLIY-------- 65
I +G+ ++ HG+VH ++ N LL + A+ ++ L L+Y
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 66 --------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP 111
D W+ G E+MT + G LA DLLE E
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA--GLRLAEVPDLLE----KGERL 236
Query: 112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
P + D + KC++ +R T K LA+ F
Sbjct: 237 AQPQICTIDVYMVMVKCWMIDENIRPTFKE-LANEF 271
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 42/166 (25%)
Query: 13 YTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGLL-------- 62
Y +I+ LD++HS +V+ D++ +N +L KD H +I+ F L + G+
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLML--DKDGH-IKITDFGLCKEGIKDGATMKXF 171
Query: 63 ----------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
VD W LG V EMM + + + L ELI
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM 225
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP + + + LS + + R AK ++ H F
Sbjct: 226 --EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 42/166 (25%)
Query: 13 YTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGLL-------- 62
Y +I+ LD++HS +V+ D++ +N +L KD H +I+ F L + G+
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLML--DKDGH-IKITDFGLCKEGIKDGATMKXF 169
Query: 63 ----------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
VD W LG V EMM + + + L ELI
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM 223
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP + + + LS + + R AK ++ H F
Sbjct: 224 --EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 267
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
EI R + +L GL +IH + ++H D++ N L+
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
EI R + +L GL +IH + ++H D++ N L+
Sbjct: 125 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 158
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 42/166 (25%)
Query: 13 YTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGLL-------- 62
Y +I+ LD++HS +V+ D++ +N +L KD H +I+ F L + G+
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLML--DKDGH-IKITDFGLCKEGIKDGATMKXF 170
Query: 63 ----------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
VD W LG V EMM + + + L ELI
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM 224
Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
E FP + + + LS + + R AK ++ H F
Sbjct: 225 --EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 268
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
+VD W++G + EM+ T I W G S + + +L
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 104 --------------IAFSSEVPE--FPSN------ISEDGRDFLSKCFIRVHQLRWTAKH 141
+F P+ FP++ + RD LSK + R +
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALQHPYINV 323
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
LPE Y +++ +D IH VH DI+ DN LL
Sbjct: 172 LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 208
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
LPE Y +++ +D IH VH DI+ DN LL
Sbjct: 188 LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 31/107 (28%)
Query: 67 VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-----------SSEVPEFPS 115
+D W++G +F EM+ G++ D L+ + +E+P++
Sbjct: 182 IDIWSVGCIFAEMVNGT-----PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 116 NIS---------------EDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
N + E G D LSK R TAK L H +
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 31/107 (28%)
Query: 67 VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-----------SSEVPEFPS 115
+D W++G +F EM+ G++ D L+ + +E+P++
Sbjct: 182 IDIWSVGCIFAEMVNGT-----PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 116 NIS---------------EDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
N + E G D LSK R TAK L H +
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
+VD W++G + EM+ T I W G S + + +L
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 104 --------------IAFSSEVPE--FPSN------ISEDGRDFLSKCFIRVHQLRWTAKH 141
+F P+ FP++ + RD LSK + R +
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALQHPYINV 323
>pdb|3QDE|A Chain A, The Structure Of Cellobiose Phosphorylase From Clostridium
Thermocellum In Complex With Phosphate
pdb|3QDE|B Chain B, The Structure Of Cellobiose Phosphorylase From Clostridium
Thermocellum In Complex With Phosphate
Length = 811
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 55 FLQRHGLLLIYHVDTWALGRVFVEMMTAEISAW--GSFGRGLASRDDLLELIAFSSEVPE 112
FL+ H L V+ W + V + +++ GRG+ RD +L+ F ++PE
Sbjct: 316 FLESHDEKLNRMVNIWNQYQCMVTFNMSRSASYFESGIGRGMGFRDSNQDLLGFVHQIPE 375
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
EI R + +L GL +IH + ++H D++ N L+
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 21 LDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+++IHS +H D++ DN L+ GK + I F
Sbjct: 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 21 LDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+++IHS +H D++ DN L+ GK + I F
Sbjct: 116 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 150
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 21 LDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+++IHS +H D++ DN L+ GK + I F
Sbjct: 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 29 LVHCDIQGDNTLLVA-----------------GKDAHEAEISAFLQRHGLLL----IYHV 67
++HCD++ +N LL G+ ++ S F + +LL +
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 220
Query: 68 DTWALGRVFVEMMTAE 83
D W+LG + VEM T E
Sbjct: 221 DMWSLGCILVEMHTGE 236
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
EI R + +L GL +IH + ++H D++ N L+
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 44/157 (28%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAF--------- 55
++ + H HS G+VH DI+ +N L+ +G H+ + F
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPP 207
Query: 56 --LQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV 110
+ RH YH W+LG + +M+ +I F R ++LE +E+
Sbjct: 208 EWISRHQ----YHALPATVWSLGILLYDMVCGDI----PFERD----QEILE-----AEL 250
Query: 111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
FP+++S D + +C R + + +L P+
Sbjct: 251 -HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 29 LVHCDIQGDNTLLVA-----------------GKDAHEAEISAFLQRHGLLL----IYHV 67
++HCD++ +N LL G+ ++ S F + +LL +
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 68 DTWALGRVFVEMMTAE 83
D W+LG + VEM T E
Sbjct: 240 DMWSLGCILVEMHTGE 255
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 21/76 (27%)
Query: 29 LVHCDIQGDNTLLVA-----------------GKDAHEAEISAFLQRHGLLL----IYHV 67
++HCD++ +N LL G+ ++ S F + +LL +
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 68 DTWALGRVFVEMMTAE 83
D W+LG + VEM T E
Sbjct: 240 DMWSLGCILVEMHTGE 255
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K L E + K ++ L + HS +VH D++ +N L
Sbjct: 119 KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILF 157
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVD 68
E R + IL L +IHS G++H +++ N + ++ + H L I +D
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 69 TWAL 72
+ L
Sbjct: 177 SQNL 180
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
+VD W++G + EM+ T I W G S + + +L
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 104 --------------IAFSSEVPE--FPSN------ISEDGRDFLSKCFIRVHQLRWTAKH 141
+F P+ FP++ + RD LSK + R +
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALQHPYINV 323
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 23/98 (23%)
Query: 8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-------------LVAGK----DAHEA 50
H + + +LRGL + H ++H D++ N L L K ++
Sbjct: 100 HNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159
Query: 51 EISAFLQRHGLLLI------YHVDTWALGRVFVEMMTA 82
E+ R +L+ +D W +G +F EM T
Sbjct: 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
E + K IL + ++H +G+VH D++ +N L +I+ F
Sbjct: 147 ERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADF 195
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMMTAEI 84
+VD W++G + EM+ +I
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMMTAEI 84
+VD W++G + EM+ +I
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
+VD W++G + EM+ T I W G S + + +L
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 104 --------------IAFSSEVPE--FPSN------ISEDGRDFLSKCFIRVHQLRWTAKH 141
+F P+ FP++ + RD LSK + R +
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALQHPYINV 323
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
E ++ Y +I+ GL+H+H+ +V+ D++ N LL
Sbjct: 291 EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
E ++ Y +I+ GL+H+H+ +V+ D++ N LL
Sbjct: 291 EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|2W1Z|A Chain A, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity.
pdb|2W1Z|B Chain B, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity
Length = 368
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 33/99 (33%), Gaps = 28/99 (28%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
K L H + T ++R + +GLVH D Q N LL
Sbjct: 186 KSLVHHARLQLTLQLIRLAASLQHYGLVHADFQVRNILLDQRGGVFLTGFEHLVRDGASA 245
Query: 42 -------VAGKDAHEAEISAFLQRHGLLLIYHVDTWALG 73
A + + + Q H L+ + DTW LG
Sbjct: 246 VSPIGRGFAPPETTAERMLPYRQHHPTLMTFPFDTWTLG 284
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
+VD W++G + EM+ T I W G S + + +L
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 104 --------------IAFSSEVPE--FPSN------ISEDGRDFLSKCFIRVHQLRWTAKH 141
+F P+ FP++ + RD LSK + R +
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALQHPYINV 323
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
E ++ Y +I+ GL+H+H+ +V+ D++ N LL
Sbjct: 291 EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 128 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
Query: 66 ----------HVDTWALGRVFVEMMTAEI 84
+VD W++G + EM+ +I
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
E ++ Y +I+ GL+H+H+ +V+ D++ N LL
Sbjct: 290 EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 324
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-VAGK 45
G+ E I + +L+ LD+IH G VH ++ + L+ V GK
Sbjct: 124 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 166
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+ IL + + HS+G+VH +++ +N LL + +++ F
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 152
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-VAGK 45
G+ E I + +L+ LD+IH G VH ++ + L+ V GK
Sbjct: 108 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 150
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+ IL + + HS+G+VH +++ +N LL + +++ F
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+ IL + + HS+G+VH +++ +N LL + +++ F
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 152
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+ IL + + HS+G+VH +++ +N LL + +++ F
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 151
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 27.7 bits (60), Expect = 3.0, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 21 LDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
++ +HS +H DI+ DN L+ G+ A++ I F
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + ++F+ ++ Y+
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 67 -----------VDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
VD W++G + EM+ T I W G S + + +L
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 104 --------------IAFSSEVPE--FPSN------ISEDGRDFLSKCFIRVHQLRWTAKH 141
+F P+ FP++ + RD LSK + R +
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALQHPYINV 323
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + ++F+ ++ Y+
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 67 -----------VDTWALGRVFVEMMTAEI 84
VD W++G + EM+ +I
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVCHKI 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 27.3 bits (59), Expect = 3.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG 44
GL E I DI L ++H + ++H D++ +N +L G
Sbjct: 118 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 158
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 27.3 bits (59), Expect = 3.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG 44
GL E I DI L ++H + ++H D++ +N +L G
Sbjct: 117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 157
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
+A L ++ + D+ RG+D++ +H D+ N L+ + + A+I+ F G
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRG 181
Query: 61 LLLIYHVDTWALGRVFVEMMTAE 83
+Y T +GR+ V M E
Sbjct: 182 -QEVYVKKT--MGRLPVRWMAIE 201
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 30/109 (27%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEIS---------- 53
LP + IL G+ ++H++ ++H D++ N L++ G + +I+
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 54 -------------AFLQRHGLLLI------YHVDTWALGRVFVEMMTAE 83
F R LL+ +D WA+G +F E++T+E
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
IL L++IH H VH DI+ N LL
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLL 185
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
+A L ++ + D+ RG+D++ +H D+ N L+ + + A+I+ F G
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRG 191
Query: 61 LLLIYHVDTWALGRVFVEMMTAE 83
+Y T +GR+ V M E
Sbjct: 192 -QEVYVKKT--MGRLPVRWMAIE 211
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
IL L++IH H VH DI+ N LL
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLL 185
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 55/189 (29%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + ++F+ ++ Y+
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 67 -----------VDTWALGRVFVEMM--------TAEISAWGSF--GRGLASRDDLLEL-- 103
VD W++G + EM+ T I W G S + + +L
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 104 --------------IAFSSEVPE--FPSN------ISEDGRDFLSKCFIRVHQLRWTAKH 141
+F P+ FP++ + RD LSK + R +
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 142 VLAHPFPSV 150
L HP+ +V
Sbjct: 315 ALQHPYINV 323
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
IL L++IH H VH DI+ N LL
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLL 185
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
L E E + +L + +H++ +VH D++ +N LL
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
>pdb|2D04|A Chain A, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|C Chain C, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|E Chain E, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|G Chain G, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity
Length = 113
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 34 IQGDNTLLVAGKDA--HEAEISAFLQRHGLLLIYHVDTWALG 73
I DN ++V G D + + LQ+ GL +IY W LG
Sbjct: 64 IYDDNNMVVWGSDCWGNNGTYALVLQQDGLFVIYGPVLWPLG 105
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + ++F+ ++ Y+
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 67 -----------VDTWALGRVFVEMMTAEI 84
VD W++G + EM+ +I
Sbjct: 195 EVILGMGYKENVDLWSVGCIMGEMVCHKI 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 45/166 (27%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA-EISAF-------------------- 55
I + ++++H+ G+VH D++ N L V E+ I F
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTA 184
Query: 56 -------LQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS 108
L+R G D W+LG + +T + F G DD E I
Sbjct: 185 NFVAPEVLERQGYDAA--CDIWSLGVLLYTXLT----GYTPFANG---PDDTPEEILARI 235
Query: 109 EVPEFP------SNISEDGRDFLSKCF-IRVHQLRWTAKHVLAHPF 147
+F +++S+ +D +SK + HQ R TA VL HP+
Sbjct: 236 GSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQ-RLTAALVLRHPW 280
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK 45
E I + I L ++H+ G+ H DI+ +N L K
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 102 TERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILI 143
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 26.9 bits (58), Expect = 4.5, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query: 11 GRYTKD--------ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
GR+++D +L G+ + HS + H D++ +NTLL G A +I F
Sbjct: 111 GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL-DGSPAPRLKICDF 162
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 5 LPEHEIGR-----YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
LP H IG + + I G+ ++H+ +H D+ N LL
Sbjct: 126 LPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMMTAEI 84
+VD W++G + EM+ +I
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
L E +I I RGL+ IH+ G H D++ N LL
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL 167
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 12 RYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+Y I +G+D++ S VH D+ N L+ + H+ +I F
Sbjct: 130 KYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDF 170
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 12 RYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+Y I +G+D++ S VH D+ N L+ + H+ +I F
Sbjct: 118 KYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDF 158
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/173 (16%), Positives = 66/173 (38%), Gaps = 41/173 (23%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAFLQRHGLL 62
+ +G+D++H+ ++H D++ +N L +A + + Q G +
Sbjct: 139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 63 L---------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
L + D ++ G V E+MT E+ + +RD ++ ++
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY-----SHINNRDQIIFMVGRG 253
Query: 108 SEVPEFP---SNISEDGRDFLSKCFIRVHQLR------WTAKHVLAHPFPSVD 151
P+ N + + ++ C +V + R ++ +L H P ++
Sbjct: 254 YASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKIN 306
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISAFLQRHGLLLIY--- 65
+L G+ H+HS G++H D++ N ++ + A A S + + + Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 66 ----------HVDTWALGRVFVEMMTAEI 84
+VD W++G + EM+ +I
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + ++F+ ++ Y+
Sbjct: 140 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
Query: 67 -----------VDTWALGRVFVEMMTAEI 84
VD W++G + EM+ +I
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKI 228
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 15 KDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+ IL + H H G+VH D++ +N LL + +++ F
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADF 150
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + ++F+ ++ Y+
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 67 -----------VDTWALGRVFVEMMTAEI 84
VD W++G + EM+ +I
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 17 ILRGLDHIHSHGLVHCD-------IQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH--- 66
+L G+ H+HS G++H D ++ D TL + ++F+ ++ Y+
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 67 -----------VDTWALGRVFVEMMTAEI 84
VD W++G + EM+ +I
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKI 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
+P + + G+ ++ VH D+ N LLV + H A+IS F
Sbjct: 107 IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDF 154
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 137 MLCGIKHLHSAGIIHRDLKPSNIVV 161
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 134 MLCGIKHLHSAGIIHRDLKPSNIVV 158
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K L E E Y + I+ G ++H + ++H D++ N L
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 148
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
Query: 11 GRYTKD--------ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
GR+++D ++ G+ + H+ + H D++ +NTLL G A +I AF
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICAF 161
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K L E E Y + I+ G ++H + ++H D++ N L
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 154
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVV 152
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 17 ILRGLDHIHSHGLVHCDIQGDNTLL 41
+L G+ H+HS G++H D++ N ++
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
Query: 11 GRYTKD--------ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
GR+++D ++ G+ + H+ + H D++ +NTLL G A +I AF
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICAF 161
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K L E E Y + I+ G ++H + ++H D++ N L
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 172
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K L E E Y + I+ G ++H + ++H D++ N L
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K L E E Y + I+ G ++H + ++H D++ N L
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 150
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 67/169 (39%), Gaps = 28/169 (16%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF----LQRHGLL 62
E + R +L + ++H G+VH D++ +N L + + + IS F ++ G +
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 63 LIY--------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
L VD W++G + ++ + L + +
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ---IL 231
Query: 103 LIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
+ + P + +IS+ +DF+ + + R+T + L HP+ + D
Sbjct: 232 KAEYEFDSP-YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 105 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 146
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 107 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 102 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 149 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
K L E E Y + I+ G ++H + ++H D++ N L
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 174
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 106 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 147
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 106 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 147
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 32/171 (18%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF----LQRHGLL 62
E + R +L + ++H G+VH D++ +N L + + + IS F ++ G +
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 63 LIY--------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
L VD W++G + ++ + + L E
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE------NDAKLFE 228
Query: 103 LIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
I + + P +IS+ +DF+ + + R+T + L HP+ + D
Sbjct: 229 QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 107 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 102 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 107 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
KGL ++ D+ G+ + SH +H D+ N L+
Sbjct: 98 GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV 137
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 149 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 121 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 129 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 170
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 134 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 121 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 32/171 (18%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF----LQRHGLL 62
E + R +L + ++H G+VH D++ +N L + + + IS F ++ G +
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 63 LIY--------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
L VD W++G + ++ + + L E
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE------NDAKLFE 228
Query: 103 LIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
I + + P +IS+ +DF+ + + R+T + L HP+ + D
Sbjct: 229 QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 134 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 122 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 135 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLV---HCDIQGDNTLLV 42
S K +P + + I RG++++H +V H D++ N L++
Sbjct: 98 SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 135 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 134 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 122 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 135 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 32/171 (18%)
Query: 7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF----LQRHGLL 62
E + R +L + ++H G+VH D++ +N L + + + IS F ++ G +
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 63 LIY--------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
L VD W++G + ++ + + L E
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE------NDAKLFE 228
Query: 103 LIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
I + + P +IS+ +DF+ + + R+T + L HP+ + D
Sbjct: 229 QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 149 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 122 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 135 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 134 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3NWR|A Chain A, Crystal Structure Of A Rubisco-Like Protein From
Burkholderia Fungorum
Length = 432
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 18 LRGLDHIHSHGLVHCDIQGDNTLLVAGKD 46
L G+DH+H HGL Q D ++ + +D
Sbjct: 310 LSGVDHMHVHGLAGKFAQSDAEVIESARD 338
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 154 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 195
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
+ +G + E+ R + +L + H H+ G++H DI+ +N L+
Sbjct: 141 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,860,669
Number of Sequences: 62578
Number of extensions: 191397
Number of successful extensions: 1476
Number of sequences better than 100.0: 632
Number of HSP's better than 100.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 574
Number of HSP's gapped (non-prelim): 868
length of query: 152
length of database: 14,973,337
effective HSP length: 90
effective length of query: 62
effective length of database: 9,341,317
effective search space: 579161654
effective search space used: 579161654
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)