Citrus Sinensis ID: 039872

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------7
Protein Sequence
MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHcccEEEEEcccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHcccEEEEEcccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccEEEcc
Coil and Loop (DISEMBL)
MADWGPVVIGVVLFVLlqpgllfqlpghnrllefgsmktngkaISVHTLIFFVLYAILILAVHVHIYTG
Flexible Loop (DISEMBL)
MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG
Low Complexity Region (SEG)
MADWGPVVIgvvlfvllqpgllfqlpgHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG
Disordered region (IsUnstruct)
***WGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIY**
Disordered Region (DISOPRED)
*ADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG
Disordered Region (DISEMBL)
MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG
Disordered Region (DISPRO)
*ADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
224055753	69	predicted protein [Populus trichocarpa]	1.0	1.0	0.869	3e-26
449441702	142	PREDICTED: uncharacterized protein LOC10	1.0	0.485	0.797	2e-25
224129052	69	predicted protein [Populus trichocarpa]	1.0	1.0	0.797	2e-24
356571547	69	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.811	8e-24
356561806	69	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.768	1e-22
356573089	105	PREDICTED: uncharacterized protein LOC10	1.0	0.657	0.753	1e-22
297818258	142	hypothetical protein ARALYDRAFT_322830 [	1.0	0.485	0.724	2e-22
15232064	142	uncharacterized protein [Arabidopsis tha	1.0	0.485	0.724	3e-22
388507102	69	unknown [Medicago truncatula]	1.0	1.0	0.753	5e-22
15237527	69	uncharacterized protein [Arabidopsis tha	1.0	1.0	0.739	3e-21

>gi|224055753|ref|XP_002298636.1| predicted protein [Populus trichocarpa] gi|222845894|gb|EEE83441.1| predicted protein [Populus trichocarpa]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 66/69 (95%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          MADWGPVVIGVVLFVLLQPGLLFQLPG+N+ ++FGS+KTNGKAI+VHTLIFF  YAILIL
Sbjct: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGNNKHVDFGSLKTNGKAIAVHTLIFFTAYAILIL 60

Query: 61 AVHVHIYTG 69
          AVHVHIYTG
Sbjct: 61 AVHVHIYTG 69

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441702|ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211888 [Cucumis sativus] gi|449531380|ref|XP_004172664.1| PREDICTED: uncharacterized LOC101211888 [Cucumis sativus]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 63/69 (91%)

Query: 1   MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
           M+DW PVVIGVVLFVLL PGLLFQ PG+NR  EFGSMKTNGKA+++HTLIFFVLYA+ IL
Sbjct: 74  MSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVFIL 133

Query: 61  AVHVHIYTG 69
           A+H+HIYTG
Sbjct: 134 ALHIHIYTG 142

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129052|ref|XP_002328878.1| predicted protein [Populus trichocarpa] gi|222839308|gb|EEE77645.1| predicted protein [Populus trichocarpa]

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 65/69 (94%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          MADWGPV+IGVVLFVLL PGLLFQLPG+++ +EFGS+KTNG A++VHTLIFF +YA+LIL
Sbjct: 1  MADWGPVLIGVVLFVLLTPGLLFQLPGNSKQVEFGSLKTNGMAVAVHTLIFFAVYAVLIL 60

Query: 61 AVHVHIYTG 69
          AVHVHIYTG
Sbjct: 61 AVHVHIYTG 69

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571547|ref|XP_003553938.1| PREDICTED: uncharacterized protein LOC100795123 [Glycine max]

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 61/69 (88%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          MADW PV+IGVVLFVLLQPGLLF  PG+ + LEFGSMKTNGKAI +HTLIFF LY+ILIL
Sbjct: 1  MADWAPVLIGVVLFVLLQPGLLFSFPGNGKQLEFGSMKTNGKAIFIHTLIFFALYSILIL 60

Query: 61 AVHVHIYTG 69
          AV VHIYTG
Sbjct: 61 AVKVHIYTG 69

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561806|ref|XP_003549169.1| PREDICTED: uncharacterized protein LOC100816029 [Glycine max]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 60/69 (86%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          MADW  V+IGVVLFVLLQPGLLF  PG+ + LEFGSMKTNGKAI +HTLIFF LY++LIL
Sbjct: 1  MADWATVLIGVVLFVLLQPGLLFSFPGNGKQLEFGSMKTNGKAIFIHTLIFFALYSVLIL 60

Query: 61 AVHVHIYTG 69
          AV +HIYTG
Sbjct: 61 AVKIHIYTG 69

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573089|ref|XP_003554697.1| PREDICTED: uncharacterized protein LOC100799722 [Glycine max]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          M+DW PV+IGVVLFVLLQPGLLF  PG+   LEFGSMKTNGKAI +HTLIFF LY +LIL
Sbjct: 1  MSDWAPVLIGVVLFVLLQPGLLFSFPGNREQLEFGSMKTNGKAIFIHTLIFFALYYVLIL 60

Query: 61 AVHVHIYTG 69
          AV +HIYT 
Sbjct: 61 AVKIHIYTS 69

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297818258|ref|XP_002877012.1| hypothetical protein ARALYDRAFT_322830 [Arabidopsis lyrata subsp. lyrata] gi|297322850|gb|EFH53271.1| hypothetical protein ARALYDRAFT_322830 [Arabidopsis lyrata subsp. lyrata]

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 63/69 (91%)

Query: 1   MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
           MADW PV++GVVLFV+L PGLLF LPG+NR ++FG +KTNGKAI+VHTLIFF +Y+ILIL
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYSILIL 133

Query: 61  AVHVHIYTG 69
           A+++HIYTG
Sbjct: 134 ALNLHIYTG 142

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232064|ref|NP_189339.1| uncharacterized protein [Arabidopsis thaliana] gi|332643737|gb|AEE77258.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 62/69 (89%)

Query: 1   MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
           MADW PV++GVVLFV+L PGLLF LPG+NR ++FG +KTNGKAI+VHTLIFF +Y ILIL
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query: 61  AVHVHIYTG 69
           A+++HIYTG
Sbjct: 134 ALNLHIYTG 142

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507102|gb|AFK41617.1| unknown [Medicago truncatula]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          M+DW PVVIGVVLFV LQPGLLF  PG+ + LEFG MKTNGKAI +HTLIFF LYA++IL
Sbjct: 1  MSDWAPVVIGVVLFVFLQPGLLFSFPGNGKQLEFGGMKTNGKAIFIHTLIFFGLYAVIIL 60

Query: 61 AVHVHIYTG 69
          A+ VHIYTG
Sbjct: 61 ALRVHIYTG 69

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237527|ref|NP_198913.1| uncharacterized protein [Arabidopsis thaliana] gi|9759143|dbj|BAB09699.1| unnamed protein product [Arabidopsis thaliana] gi|20260378|gb|AAM13087.1| unknown protein [Arabidopsis thaliana] gi|21618299|gb|AAM67349.1| unknown [Arabidopsis thaliana] gi|23197774|gb|AAN15414.1| unknown protein [Arabidopsis thaliana] gi|332007237|gb|AED94620.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 59/69 (85%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          MADW PV++GVVLFV+L PGLLF LPGH+  L+FG MKTNGKAI+VHTLIFF  Y ILIL
Sbjct: 1  MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60

Query: 61 AVHVHIYTG 69
          AV++HI TG
Sbjct: 61 AVNLHITTG 69

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
TAIR|locus:2091985	142	AT3G27030 "AT3G27030" [Arabido	1.0	0.485	0.507	1.4e-14
TAIR|locus:2162991	69	AT5G40970 "AT5G40970" [Arabido	1.0	1.0	0.521	6.2e-14
TAIR|locus:2114550	89	AT3G48660 "AT3G48660" [Arabido	1.0	0.775	0.434	2.2e-11
TAIR|locus:2167341	69	AT5G63500 "AT5G63500" [Arabido	1.0	1.0	0.420	2e-10
TAIR|locus:2163006	69	AT5G40980 "AT5G40980" [Arabido	0.956	0.956	0.363	2.9e-09
TAIR|locus:4515103138	69	AT3G27027 "AT3G27027" [Arabido	0.942	0.942	0.353	1.2e-08
TAIR|locus:2174663	70	AT5G14110 "AT5G14110" [Arabido	0.942	0.928	0.353	2.6e-08
TAIR|locus:2078628	70	AT3G01940 "AT3G01940" [Arabido	0.956	0.942	0.348	3.3e-08
TAIR|locus:2078618	70	AT3G01950 "AT3G01950" [Arabido	0.942	0.928	0.338	3.3e-08
TAIR|locus:4515103540	69	AT5G08391 "AT5G08391" [Arabido	1.0	1.0	0.304	8.7e-08

TAIR|locus:2091985 AT3G27030 "AT3G27030" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 35/69 (50%), Positives = 46/69 (66%)

Query:     1 MADWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
             MADW PV++                  +NR ++FG +KTNGKAI+VHTLIFF +Y ILIL
Sbjct:    74 MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query:    61 AVHVHIYTG 69
             A+++HIYTG
Sbjct:   134 ALNLHIYTG 142

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2162991 AT5G40970 "AT5G40970" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 36/69 (52%), Positives = 43/69 (62%)

Query:     1 MADWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
             MADW PV++                  H+  L+FG MKTNGKAI+VHTLIFF  Y ILIL
Sbjct:     1 MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60

Query:    61 AVHVHIYTG 69
             AV++HI TG
Sbjct:    61 AVNLHITTG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2114550 AT3G48660 "AT3G48660" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/69 (43%), Positives = 41/69 (59%)

Query:     1 MADWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
             MADWGPVV+                    R++EFG+M+T+G +I VHT+IFF L  I  +
Sbjct:     1 MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query:    61 AVHVHIYTG 69
             A+ +HIYTG
Sbjct:    61 AIRLHIYTG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2167341 AT5G63500 "AT5G63500" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query:     1 MADWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
             MADWGPV+I                    R++EFG+M+T+G +I VH +IFF L  I  +
Sbjct:     1 MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query:    61 AVHVHIYTG 69
             A++VHIY+G
Sbjct:    61 AINVHIYSG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2163006 AT5G40980 "AT5G40980" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 24/66 (36%), Positives = 38/66 (57%)

Query:     2 ADWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILA 61
             ADWGPV++                    R++EFG+M T+G +I VH +I+F +  ILI+A
Sbjct:     3 ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIA 62

Query:    62 VHVHIY 67
             + +HI+
Sbjct:    63 IQIHIH 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:4515103138 AT3G27027 "AT3G27027" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query:     3 DWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAV 62
             DWGPV++                    R++EFG+M T+G AI VH  I+F +  IL++A+
Sbjct:     4 DWGPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVHAFIYFCILTILVIAI 63

Query:    63 HVHIY 67
              +HI+
Sbjct:    64 QIHIH 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2174663 AT5G14110 "AT5G14110" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query:     3 DWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAV 62
             +WGPV++                    +++EFG  +T+G AI +HTLIFF    + I+A+
Sbjct:     4 NWGPVLMSVFLFIVLTPGVLFQLPGKTKVVEFGGFQTSGAAIVIHTLIFFACITVSIIAL 63

Query:    63 HVHIY 67
             H+HIY
Sbjct:    64 HIHIY 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2078628 AT3G01940 "AT3G01940" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query:     2 ADWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILA 61
             ADWGPV +                    R+LE G+M T+G +I VH ++FF +  IL++A
Sbjct:     4 ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query:    62 VHVHIY 67
             + +HI+
Sbjct:    64 IQIHIH 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2078618 AT3G01950 "AT3G01950" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query:     3 DWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAV 62
             DWGPV++                   ++ +EFG  +T+G +I +HTL+FF    I ++A+
Sbjct:     4 DWGPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIHTLLFFAFITISLIAL 63

Query:    63 HVHIY 67
             H+HIY
Sbjct:    64 HIHIY 68

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:4515103540 AT5G08391 "AT5G08391" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query:     1 MADWGPVVIXXXXXXXXXXXXXXXXXXHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
             M+DWGPV++                    + +EFG+ +T+  ++ VH+L++F L  + +L
Sbjct:     1 MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query:    61 AVHVHIYTG 69
             A+ +HIY G
Sbjct:    61 ALKIHIYIG 69

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0017006301 hypothetical protein (69 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	69
pfam11820	68	pfam11820, DUF3339, Protein of unknown function (D	7e-30

>gnl|CDD|192844 pfam11820, DUF3339, Protein of unknown function (DUF3339)

 Score = 99.7 bits (249), Expect = 7e-30
 Identities = 46/68 (67%), Positives = 58/68 (85%)

Query: 1  MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILIL 60
          MADWGPV++ VVLFVLL PGLLFQLPG NR++EFG+M+T+GK+I VHTL+FF L  I ++
Sbjct: 1  MADWGPVLVAVVLFVLLSPGLLFQLPGRNRVVEFGNMQTSGKSILVHTLLFFALITIFLV 60

Query: 61 AVHVHIYT 68
          A+ VHIY 
Sbjct: 61 ALGVHIYA 68

This family of proteins are functionally uncharacterized. This family is found in eukaryotes. Proteins in this family are about 70 amino acids in length. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	69
PF11820	68	DUF3339: Protein of unknown function (DUF3339); In	100.0
COG2864	218	FdnI Cytochrome b subunit of formate dehydrogenase	81.68

>PF11820 DUF3339: Protein of unknown function (DUF3339); InterPro: IPR021775 This family of proteins are functionally uncharacterised

Probab=100.00  E-value=4.4e-47  Score=238.53  Aligned_cols=68  Identities=71%  Similarity=1.274  Sum_probs=67.4

Q ss_pred             CCCchhHHHHHHHHHHhccceeEEecCCCceeeecCCcccHHHHHHHHHHHHHHHHHHHHHHhheeec
Q 039872            1 MADWGPVVIGVVLFVLLQPGLLFQLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYT   68 (69)
Q Consensus         1 M~DWgpV~i~vvLFvlLsPGLLfQ~PG~~r~veFgn~~Tsg~si~VHa~ifF~l~~if~~ai~vHiy~   68 (69)
                      |+|||||+|+++||++||||||||+|||+|++|||||||||+||+|||++||+++++|++|+++|+|+
T Consensus         1 M~DWgpv~i~vvLFvlLsPGLLfqlPG~~r~veFgn~~Tsg~si~vHa~iff~l~~i~~va~~vhiy~   68 (68)
T PF11820_consen    1 MADWGPVLIAVVLFVLLSPGLLFQLPGRGRVVEFGNMKTSGKSILVHALIFFALFTIFLVAIGVHIYT   68 (68)
T ss_pred             CCcchhHHHHHHHHHHhCCceEEEecCCCceEEEcCCcchHHHHHHHHHHHHHHHHHHHHHheeEeeC
Confidence            89999999999999999999999999999999999999999999999999999999999999999996

This family is found in eukaryotes. Proteins in this family are about 70 amino acids in length.

>COG2864 FdnI Cytochrome b subunit of formate dehydrogenase [Energy production and conversion]

Probab=81.68  E-value=0.88  Score=33.94  Aligned_cols=50  Identities=22%  Similarity=0.374  Sum_probs=37.7

Q ss_pred             HHHHHHhccceeE--EecCCCceeeecCCcccHHHHHHHHHHHHHHHHHHHHHHhheeecC
Q 039872           11 VVLFVLLQPGLLF--QLPGHNRLLEFGSMKTNGKAISVHTLIFFVLYAILILAVHVHIYTG   69 (69)
Q Consensus        11 vvLFvlLsPGLLf--Q~PG~~r~veFgn~~Tsg~si~VHa~ifF~l~~if~~ai~vHiy~g   69 (69)
                      +..++++--|+..  |.|..     ++++.+...|.++|+.--+.+.+++    .+|+|++
T Consensus       123 l~~~~l~iTGivmw~~y~~~-----~~~i~~~r~s~l~h~~~a~~l~~~~----~vHiy~a  174 (218)
T COG2864         123 LAIVLLLITGIVIWRPYFAP-----YFSIPLLRLSLLLHAFAAVILIFII----IVHIYMA  174 (218)
T ss_pred             HHHHHHHHHHHHHHhhhccc-----cccHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence            3446666778777  66654     6889999999999999888876654    4788864

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00