BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039873
(709 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/695 (51%), Positives = 496/695 (71%)
Query: 15 RCAPFLFKQNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSL 74
+ A + K + P ++ +LLK A+S L++G+ IHAHLI+T +SSR E+ NSL
Sbjct: 16 KLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSL 75
Query: 75 VNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPN 134
+NLY KC + AR+LFD M +RNVVS+ ++M Y ++GF E LKLFK+M PN
Sbjct: 76 INLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPN 135
Query: 135 EYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLD 194
E++ ++V SCS SGR EG+Q HG K GL+ ++VRN LV +Y+ C A R+LD
Sbjct: 136 EFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLD 195
Query: 195 LLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKL 254
LP D+ ++S L+G +E F+ G++VL K + W+++TY+++ L ++L+DL L
Sbjct: 196 DLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNL 255
Query: 255 GLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQ 314
LQVHS+M++ +V A+I+MYGKCGK A++VF+ +N+ L T ++ A FQ
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ 315
Query: 315 NEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIV 374
++ FEEALNLF M+ + + PNE+TFA++LNS A LS L+ GDLLH + KSG++ H++V
Sbjct: 316 DKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMV 375
Query: 375 GNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEE 434
GNAL+NMYAK G+IE A K FS M +RDI+TWN MI G SHHGLGREAL F M+ E
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 435 RPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAE 494
PN +TF+GVL AC H+G V++G +Y N LMK+ + P ++HYTCIVGLLSKAG+ +AE
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 495 KFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEK 554
FMR+ P++WDVVAW TLLNA V +NY G+++AEY + PND G Y+LLSN++AK +
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSR 555
Query: 555 RWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIK 614
W+GV+K+R LM R VKKEPG SW IRN THVF++ D+ HPE + IY KV+E+ +KIK
Sbjct: 556 EWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Query: 615 PLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHS 674
PLGY PDVA HDV++EQ+ED L++HSEKLA+AY L++TP +P+ V KN+R+CDDCHS
Sbjct: 616 PLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHS 675
Query: 675 AVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
A+KLISK++KR I++RD+NRFH F DG CSC DYW
Sbjct: 676 AIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/670 (38%), Positives = 390/670 (58%), Gaps = 5/670 (0%)
Query: 40 SADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNV 99
SAD + G+ +HA+ TT+ N + +L+NLYAKC I A F NV
Sbjct: 400 SADGTLFR-GQQLHAY---TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 100 VSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHG 159
V ++ ++ Y L + ++F+ M + + PN+Y + +L +C R G G Q H
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 160 YVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRG 219
+ K+ YV + L+++Y K ++ A +L G DV + +++ G +
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 220 GVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMIS 279
+ +M+ +R D V NA A L+ LK G Q+H+Q S D+ +A+++
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 280 MYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFT 339
+Y +CGK + FE E + + W A+V+ Q+ EEAL +F M E I N FT
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFT 694
Query: 340 FAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMR 399
F + +A+ + ++ G +HA I K+G+ V NALI+MYAK G+I A K F ++
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 400 YRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFY 459
++ ++WNA+I YS HG G EAL F M+ + RPNHVT VGVLSAC H+GLV +G
Sbjct: 755 TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIA 814
Query: 460 YLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVH 519
Y + + G+ P EHY C+V +L++AGLL A++F++ P+K D + W TLL+A VH
Sbjct: 815 YFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 874
Query: 520 QNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSW 579
+N G A ++L ++P D TY+LLSN+YA K+WD R+ MK + VKKEPG SW
Sbjct: 875 KNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSW 934
Query: 580 TEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLN 639
E++N+ H F GD NHP + +I+E ++L+ + +GYV D ++L++++ EQK+ +
Sbjct: 935 IEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIF 994
Query: 640 HHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQ 699
HSEKLAI++ L+ P T PI V+KNLR+C+DCH+ +K +SK++ R+IIVRD RFH F+
Sbjct: 995 IHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFE 1054
Query: 700 DGCCSCTDYW 709
G CSC DYW
Sbjct: 1055 GGACSCKDYW 1064
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 226/468 (48%), Gaps = 14/468 (2%)
Query: 52 IHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLH 111
IHA ++ ++ V+ N L++LY++ + +AR++FD +R ++ S+ ++++
Sbjct: 209 IHARILY---QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 112 NGFLLETLKLFKNM-VSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCK 170
N E ++LF +M V G + P Y FS VLS+C + G Q HG V K G
Sbjct: 266 NECEAEAIRLFCDMYVLG--IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 171 YVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSG 230
YV NALV LY ++ A+ + + D YN+++NGL + +E+ +M
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 231 SVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNA 290
+ DS T + ++ L G Q+H+ K + I A++++Y KC A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 291 KKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGL 350
F E NVVLW M+ A + + +F M+ E I PN++T+ +L + L
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 351 SALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMI 410
L G+ +H+ I K+ F+ + V + LI+MYAK G ++ A + +D+++W MI
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 411 CGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQI-- 468
GY+ + +ALT F+ ML R + V +SAC L ++EG + Q
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG----QQIHAQACV 619
Query: 469 -GIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNA 515
G L +V L S+ G ++E+ T D +AW+ L++
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG-DNIAWNALVSG 666
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 234/497 (47%), Gaps = 15/497 (3%)
Query: 23 QNRAPPSVEDTLKLLKHSA--DSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAK 80
+NR TLK L + L G+ +H+ ++ + + N L+ L + Y
Sbjct: 76 ENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQIL---KLGLDSNGCLSEKLFDFYLF 132
Query: 81 CNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSI 140
+ A ++FD M +R + +++ ++ + E LF MVS +N+ PNE FS
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSG 191
Query: 141 VLSSCSRSGRGAEG--RQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPG 198
VL +C R G A Q H + GL V N L++LY++ V++A+R+ D L
Sbjct: 192 VLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 199 YDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQV 258
D + ++++GL +NEC + + M + + + ++ L++G Q+
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 259 HSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYF 318
H +LK D ++ +A++S+Y G +A+ +F + R+ V + ++ Q Y
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 319 EEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNAL 378
E+A+ LF M + + P+ T A ++ + + L G LHA+ K GF + + AL
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 379 INMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNH 438
+N+YAK +IE A F + +++ WN M+ Y R + +F+ M E PN
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 439 VTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTC--IVGLLSKAGLLDEAEKF 496
T+ +L C LG ++ G + ++K L Y C ++ + +K G LD A
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIK---TNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 497 MRSTPVKWDVVAWHTLL 513
+ K DVV+W T++
Sbjct: 548 LIRFAGK-DVVSWTTMI 563
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/666 (39%), Positives = 401/666 (60%), Gaps = 13/666 (1%)
Query: 49 GKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTW 108
G+ + H ++ ++ ++ + ++NSL+NLY KC + AR LFD ++VV+++S+++
Sbjct: 211 GRGLQVHTVVV-KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 109 YLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVF 168
Y NG LE L +F +M + + +E F+ V+ C+ Q H V K G +F
Sbjct: 270 YAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 169 CKYVRNALVELYTKCLDVEMAKRLLDLLPGY-DVFEYNSVLNGLIENECFRGGVEVLGKM 227
+ +R AL+ Y+KC + A RL + +V + ++++G ++N+ V++ +M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 228 VSGSVRWDSVTYVNAFGLSASLKDLKL--GLQVHSQMLKSDIEPDVFINSAMISMYGKCG 285
VR + TY S L L + +VH+Q++K++ E + +A++ Y K G
Sbjct: 389 KRKGVRPNEFTY------SVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 286 KFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLN 345
K A KVF G++ +++V W+AM+A Q E A+ +F + I+PNEFTF+ +LN
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 346 SAAGLSA-LRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDII 404
A +A + G H KS L V +AL+ MYAK GNIE+A +VF R +D++
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 405 TWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHL 464
+WN+MI GY+ HG +AL +F+ M + + + VTF+GV +AC H GLV+EG Y + +
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 465 MKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGF 524
++ I P EH +C+V L S+AG L++A K + + P W T+L A RVH+
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTEL 682
Query: 525 GRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRN 584
GR AE I+ M P D Y+LLSNMYA+ W +K+RKLM R VKKEPG SW E++N
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Query: 585 TTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEK 644
T+ F++GD +HP QIY K+ +LS ++K LGY PD + VL D++DE KE L HSE+
Sbjct: 743 KTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSER 802
Query: 645 LAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRF-QDGCC 703
LAIA+ L+ TP +P+L+IKNLR+C DCH +KLI+K+ +R+I+VRD+NRFH F DG C
Sbjct: 803 LAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVC 862
Query: 704 SCTDYW 709
SC D+W
Sbjct: 863 SCGDFW 868
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 250/491 (50%), Gaps = 22/491 (4%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
+LK SA D G+ +H I + ++V + SLV+ Y K + R++FD M+
Sbjct: 99 VLKVSATLCDELFGRQLHCQCI---KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
+RNVV++++L++ Y N E L LF M + +PN + F+ L + G G G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE 215
Q H V K+GL V N+L+ LY KC +V A+ L D V +NS+++G N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 216 CFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINS 275
+ + M VR ++ + L A+LK+L+ Q+H ++K D I +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 276 AMISMYGKCGKFSNAKKVFEGLE-TRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIR 334
A++ Y KC +A ++F+ + NVV WTAM++ QN+ EEA++LF M+ + +R
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 335 PNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKV 394
PNEFT++V+L + +S +HA + K+ ++ VG AL++ Y K G +E A KV
Sbjct: 395 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 395 FSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHL--- 451
FS + +DI+ W+AM+ GY+ G A+ +F + +PN TF +L+ C
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 452 ---GLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVA 508
G GF + L + + L + + +K G ++ AE+ + K D+V+
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSAL------LTMYAKKGNIESAEEVFKRQREK-DLVS 563
Query: 509 WHTLLNASRVH 519
W+++++ H
Sbjct: 564 WNSMISGYAQH 574
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 34/361 (9%)
Query: 189 AKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSAS 248
A L D PG D Y S+L G + + + + + D + + +SA+
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 249 LKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAM 308
L D G Q+H Q +K DV + ++++ Y K F + +KVF+ ++ RNVV WT +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 309 VAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGF 368
++ +N +E L LF M+ E +PN FTFA L A G +H + K+G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 369 KEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQN 428
+ + V N+LIN+Y K GN+ A +F + ++TWN+MI GY+ +GL EAL +F +
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 429 MLAAEERPNHVTFVGVLSACG-----------HLGLVQEGFYYLNH-------------- 463
M R + +F V+ C H +V+ GF + +
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 464 ------LMKQIGIVPGLEHYTCIV-GLLSKAGLLDEAEKF--MRSTPVKWDVVAWHTLLN 514
L K+IG V + +T ++ G L G + + F M+ V+ + + +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 515 A 515
A
Sbjct: 406 A 406
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 204/428 (47%), Gaps = 8/428 (1%)
Query: 87 ARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCS 146
A LFD R+ SY SL+ + +G E +LF N + +E + IFS VL +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN-IHRLGMEMDCSIFSSVLKVSA 104
Query: 147 RSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNS 206
GRQ H K G + V +LV+ Y K + + +++ D + +V + +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 207 VLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSD 266
+++G N + + +M + + +S T+ A G+ A GLQVH+ ++K+
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 267 IEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFC 326
++ + +++++I++Y KCG A+ +F+ E ++VV W +M++ N EAL +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 327 GMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGG 386
M +R +E +FA ++ A L LR + LH + K GF + AL+ Y+K
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 387 NIEAANKVFSDMR-YRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVL 445
+ A ++F ++ ++++W AMI G+ + EA+ LF M RPN T+ +L
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 446 SACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWD 505
+A + + + ++ V T ++ K G ++EA K K D
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVEEAAKVFSGIDDK-D 458
Query: 506 VVAWHTLL 513
+VAW +L
Sbjct: 459 IVAWSAML 466
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 2/230 (0%)
Query: 286 KFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLN 345
+ NA +F+ R+ + +++ ++ +EA LF + + + F+ +L
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 346 SAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIIT 405
+A L G LH K GF + + VG +L++ Y KG N + KVF +M+ R+++T
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 406 WNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLM 465
W +I GY+ + + E LTLF M +PN TF L G+ G ++
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 466 KQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNA 515
K G+ + ++ L K G + +A T VK VV W+++++
Sbjct: 222 KN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 269
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/704 (37%), Positives = 400/704 (56%), Gaps = 67/704 (9%)
Query: 72 NSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNL 131
N++++ Y+K + + FD + QR+ VS+++++ Y + G + +++ +MV + +
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK-EGI 142
Query: 132 EPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKR 191
EP ++ + VL+S + + G++ H ++ K GL V N+L+ +Y KC D MAK
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 192 LLDLLPGYDVFEYNSVL---------------------------NGLIENECFRG----G 220
+ D + D+ +N+++ N +I RG
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 221 VEVLGKMVSGSV-RWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMIS 279
+++ KM+ S+ D T + A+L+ L +G Q+HS ++ + + + +A+IS
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 280 MYGKCG---------------------------------KFSNAKKVFEGLETRNVVLWT 306
MY +CG + AK +F L+ R+VV WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 307 AMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKS 366
AM+ Q+ + EA+NLF M RPN +T A ML+ A+ L++L HG +H KS
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 367 GFKEHLIVGNALINMYAKGGNIEAANKVFSDMR-YRDIITWNAMICGYSHHGLGREALTL 425
G + V NALI MYAK GNI +A++ F +R RD ++W +MI + HG EAL L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 426 FQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLS 485
F+ ML RP+H+T+VGV SAC H GLV +G Y + + I+P L HY C+V L
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 486 KAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYIL 545
+AGLL EA++F+ P++ DVV W +LL+A RVH+N G+ AE +L ++P + G Y
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 546 LSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEK 605
L+N+Y+ +W+ +KIRK MK +VKKE G SW E+++ HVF D HPE ++IY
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 682
Query: 606 VRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKN 665
++++ +IK +GYVPD A+VLHD+E+E KE L HHSEKLAIA+ L+ TP + ++KN
Sbjct: 683 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 742
Query: 666 LRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
LR+C+DCH+A+K ISKL R+IIVRDT RFH F+DG CSC DYW
Sbjct: 743 LRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 207/481 (43%), Gaps = 97/481 (20%)
Query: 135 EYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLD 194
E +++ S ++S + H V KSGL+F Y+ N L+ +Y+K A++L D
Sbjct: 14 ELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFD 73
Query: 195 LLPGYDVFEYNSVLN-----GLIENEC--------------------------FRGGVEV 223
+P F +N+VL+ G +++ C + + V
Sbjct: 74 EMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV 133
Query: 224 LGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGK 283
+G MV + T N A+ + ++ G +VHS ++K + +V +++++++MY K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 284 CGKFSNAKKV-------------------------------FEGLETRNVVLWTAMVAAC 312
CG AK V FE + R++V W +M++
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 313 FQNEYFEEALNLFCGMEYEA-IRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEH 371
Q Y AL++F M ++ + P+ FT A +L++ A L L G +H+HI +GF
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 372 LIVGNALINMYAKGGNIEAANK---------------------------------VFSDM 398
IV NALI+MY++ G +E A + +F +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 399 RYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGF 458
+ RD++ W AMI GY HG EA+ LF++M+ +RPN T +LS L + G
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 459 YYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRV 518
+K G + + ++ + +KAG + A + + D V+W +++ A
Sbjct: 434 QIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 519 H 519
H
Sbjct: 493 H 493
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 138/336 (41%), Gaps = 66/336 (19%)
Query: 253 KLGLQVHSQMLKSDIE-PDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAA 311
K G +H++ L ++ F + ++S Y K G + + F+ L R+ V WT M+
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 312 CFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEH 371
+ +A+ + M E I P +FT +L S A + G +H+ I K G + +
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 372 LIVGNALINMYAKGGN-------------------------------IEAANKVFSDMRY 400
+ V N+L+NMYAK G+ ++ A F M
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 401 RDIITWNAMICGYSHHGLGREALTLFQNMLA-AEERPNHVTFVGVLSACG---------- 449
RDI+TWN+MI G++ G AL +F ML + P+ T VLSAC
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 450 -HLGLVQEGF----YYLNHLMKQIGIVPG-----------------LEHYTCIVGLLSKA 487
H +V GF LN L+ G +E +T ++ K
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 488 GLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYG 523
G +++A+ S + DVVAW ++ H +YG
Sbjct: 361 GDMNQAKNIFVSLKDR-DVVAWTAMIVGYEQHGSYG 395
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 394/675 (58%), Gaps = 6/675 (0%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
+L + L LG+ +H + + + + ++NSL+N+Y K + AR +FDNM
Sbjct: 321 MLATAVKVDSLALGQQVHC---MALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAE-G 154
+R+++S++S++ NG +E + LF ++ L+P++Y + VL + S G
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC-GLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 155 RQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIEN 214
+Q H + K V +V AL++ Y++ ++ A+ L + +D+ +N+++ G ++
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 215 ECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFIN 274
+++ M R D T F L + G QVH+ +KS + D++++
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 275 SAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIR 334
S ++ MY KCG S A+ F+ + + V WT M++ C +N E A ++F M +
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 335 PNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKV 394
P+EFT A + +++ L+AL G +HA+ K VG +L++MYAK G+I+ A +
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 395 FSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLV 454
F + +I WNAM+ G + HG G+E L LF+ M + +P+ VTF+GVLSAC H GLV
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 455 QEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLN 514
E + ++ + GI P +EHY+C+ L +AGL+ +AE + S ++ + TLL
Sbjct: 736 SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLA 795
Query: 515 ASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKE 574
A RV + G+R+A +L ++P D Y+LLSNMYA +WD + R +MK KVKK+
Sbjct: 796 ACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 855
Query: 575 PGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQK 634
PG SW E++N H+F+ D ++ ++ IY KV+++ IK GYVP+ L DVE+E+K
Sbjct: 856 PGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEK 915
Query: 635 EDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNR 694
E L +HSEKLA+A+ L+ TPP+ PI VIKNLR+C DCH+A+K I+K+ R+I++RD NR
Sbjct: 916 ERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANR 975
Query: 695 FHRFQDGCCSCTDYW 709
FHRF+DG CSC DYW
Sbjct: 976 FHRFKDGICSCGDYW 990
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/555 (24%), Positives = 240/555 (43%), Gaps = 82/555 (14%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
L+++ S DL LGK HA ++ E N L N+L+++Y+KC ++ AR++FD M
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEE---NPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 96 QRNVVS----------------------------------YSSLMTWY------LHNGFL 115
R++VS Y+S MT LH+G++
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 116 LETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNA 175
+ + F L+ +E++ +++ + G+ EG+ + +V + A
Sbjct: 162 WAS-ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 176 LVELYTK--CLDV------------EMAKRLLDLLPGYD--------------------V 201
+E+ K +D+ E+ RLL + G D +
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEI 280
Query: 202 FEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQ 261
N L+ + + + ++ MV V D VT++ + + L LG QVH
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 262 MLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEA 321
LK ++ + +++++I+MY K KF A+ VF+ + R+++ W +++A QN EA
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 322 LNLFCGMEYEAIRPNEFTFAVMLNSAAGL-SALRHGDLLHAHIEKSGFKEHLIVGNALIN 380
+ LF + ++P+++T +L +A+ L L +H H K V ALI+
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460
Query: 381 MYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVT 440
Y++ ++ A +F + D++ WNAM+ GY+ G + L LF M ER + T
Sbjct: 461 AYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 441 FVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRST 500
V CG L + +G + +K G L + I+ + K G + A+ S
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 501 PVKWDVVAWHTLLNA 515
PV D VAW T+++
Sbjct: 579 PVP-DDVAWTTMISG 592
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 194/410 (47%), Gaps = 7/410 (1%)
Query: 106 MTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSG 165
++ YLH+G LK F +MV D +E ++ F ++L++ + A G+Q H K G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 166 LVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLG 225
L V N+L+ +Y K A+ + D + D+ +NSV+ G+ +N V +
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 226 KMVSGSVRWDSVTYVNAFGLSASLKD-LKLGLQVHSQMLKSDIEPDVFINSAMISMYGKC 284
+++ ++ D T + ++SL + L L QVH +K + D F+++A+I Y +
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 285 GKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVML 344
A+ +FE ++V W AM+A Q+ + L LF M + R ++FT A +
Sbjct: 466 RCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 345 NSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDII 404
+ L A+ G +HA+ KSG+ L V + +++MY K G++ AA F + D +
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 405 TWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGF-YYLNH 463
W MI G +G A +F M P+ T + A L +++G + N
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 464 LMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLL 513
L P + T +V + +K G +D+A + + ++ AW+ +L
Sbjct: 645 LKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAML 691
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/682 (37%), Positives = 403/682 (59%), Gaps = 23/682 (3%)
Query: 41 ADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVV 100
A+ LK G+ +H H+I T + V + N LVN+YAKC I+ AR++F M ++ V
Sbjct: 324 AEEVGLKKGREVHGHVITT--GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 101 SYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGY 160
S++S++T NG +E ++ +K+M D L P + LSSC+ G+Q HG
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 161 VFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE----- 215
K G+ V NAL+ LY + + +++ +P +D +NS++ L +E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 216 ---CFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVF 272
CF K+ + +T+ + +SL +LG Q+H LK++I +
Sbjct: 501 AVVCFLNAQRAGQKL-------NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 273 INSAMISMYGKCGKFSNAKKVFEGL-ETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYE 331
+A+I+ YGKCG+ +K+F + E R+ V W +M++ NE +AL+L M
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 332 AIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAA 391
R + F +A +L++ A ++ L G +HA ++ + ++VG+AL++MY+K G ++ A
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 392 NKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNM-LAAEERPNHVTFVGVLSACGH 450
+ F+ M R+ +WN+MI GY+ HG G EAL LF+ M L + P+HVTFVGVLSAC H
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSH 733
Query: 451 LGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWH 510
GL++EGF + + G+ P +EH++C+ +L +AG LD+ E F+ P+K +V+ W
Sbjct: 734 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 511 TLLNAS-RVH-QNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKV 568
T+L A R + + G++ AE + ++P + Y+LL NMYA RW+ + K RK MK
Sbjct: 794 TVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKD 853
Query: 569 RKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHD 628
VKKE G SW +++ H+F++GD +HP++ IY+K++EL+ K++ GYVP L+D
Sbjct: 854 ADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYD 913
Query: 629 VEDEQKEDYLNHHSEKLAIAYAL-METPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDI 687
+E E KE+ L++HSEKLA+A+ L + T PI ++KNLR+C DCHSA K ISK+ R I
Sbjct: 914 LEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQI 973
Query: 688 IVRDTNRFHRFQDGCCSCTDYW 709
I+RD+NRFH FQDG CSC+D+W
Sbjct: 974 ILRDSNRFHHFQDGACSCSDFW 995
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 228/462 (49%), Gaps = 15/462 (3%)
Query: 65 NENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKN 124
+++V L N+L+N Y + AR++FD M RN VS++ +++ Y NG E L ++
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 125 MVSGDNLEPNEYIFSIVLSSCSRSGRGAE--GRQCHGYVFKSGLVFCKYVRNALVELYTK 182
MV + + N+Y F VL +C G GRQ HG +FK V N L+ +Y K
Sbjct: 93 MVK-EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 183 CL-DVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVN 241
C+ V A + + +NS+++ + R + M R T+ +
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 242 AFGLSASLK--DLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLET 299
+ SL D++L Q+ + KS + D+F+ S ++S + K G S A+KVF +ET
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 300 RNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLS-----ALR 354
RN V ++ + ++ EEA LF M I + ++ ++L+S S L+
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLK 330
Query: 355 HGDLLHAHIEKSGFKEHLI-VGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGY 413
G +H H+ +G + ++ +GN L+NMYAK G+I A +VF M +D ++WN+MI G
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 414 SHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPG 473
+G EA+ +++M + P T + LS+C L + G +K +GI
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDLN 449
Query: 474 LEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNA 515
+ ++ L ++ G L+E K S P + D V+W++++ A
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 259 HSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYF 318
HS++ K+ ++ DV++ + +I+ Y + G +A+KVF+ + RN V W +V+ +N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 319 EEALNLFCGMEYEAIRPNEFTFAVMLNSAA--GLSALRHGDLLHAHIEKSGFKEHLIVGN 376
+EAL M E I N++ F +L + G + G +H + K + +V N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 377 ALINMYAKG-GNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEER 435
LI+MY K G++ A F D+ ++ ++WN++I YS G R A +F +M R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 436 PNHVTFVG-VLSACGHLGLVQEGFYYLNHLMKQI---GIVPGLEHYTCIVGLLSKAGLLD 491
P TF V +AC L + L +M I G++ L + +V +K+G L
Sbjct: 204 PTEYTFGSLVTTAC---SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 492 EAEK 495
A K
Sbjct: 261 YARK 264
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/682 (36%), Positives = 393/682 (57%), Gaps = 5/682 (0%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIA 87
P V + LLK D +L++GK IH L+ +S + ++ L N+YAKC Q++ A
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLV---KSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 88 RQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSR 147
R++FD M +R++VS+++++ Y NG L++ K+M +NL+P+ VL + S
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSA 248
Query: 148 SGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSV 207
+ G++ HGY +SG + ALV++Y KC +E A++L D + +V +NS+
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 208 LNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDI 267
++ ++NE + + + KM+ V+ V+ + A A L DL+ G +H ++ +
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 268 EPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCG 327
+ +V + +++ISMY KC + A +F L++R +V W AM+ QN +ALN F
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 328 MEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGN 387
M ++P+ FT+ ++ + A LS H +H + +S +++ V AL++MYAK G
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 388 IEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSA 447
I A +F M R + TWNAMI GY HG G+ AL LF+ M +PN VTF+ V+SA
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 448 CGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVV 507
C H GLV+ G + + I ++HY +V LL +AG L+EA F+ PVK V
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 508 AWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMK 567
+ +L A ++H+N F + AE + ++P+D G ++LL+N+Y W+ V ++R M
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 568 VRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLH 627
+ ++K PG S EI+N H F SG + HP+S +IY + +L IK GYVPD VL
Sbjct: 669 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL- 727
Query: 628 DVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDI 687
VE++ KE L+ HSEKLAI++ L+ T I V KNLR+C DCH+A K IS +T R+I
Sbjct: 728 GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREI 787
Query: 688 IVRDTNRFHRFQDGCCSCTDYW 709
+VRD RFH F++G CSC DYW
Sbjct: 788 VVRDMQRFHHFKNGACSCGDYW 809
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 263/541 (48%), Gaps = 19/541 (3%)
Query: 7 PTSPQAATRCAPFLFKQNRAPPSVED--TLKLLKHSADSKDLKLGKVIHAHLIITTESSR 64
P P +R FL ++N P +V + LL+ + K+L+ L + ++
Sbjct: 12 PQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELR------QILPLVFKNGL 65
Query: 65 NENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKN 124
+ LV+L+ + + A ++F+ + + V Y +++ + L + L+ F
Sbjct: 66 YQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVR 125
Query: 125 MVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCL 184
M D++EP Y F+ +L C G++ HG + KSG + L +Y KC
Sbjct: 126 M-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR 184
Query: 185 DVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFG 244
V A+++ D +P D+ +N+++ G +N R +E++ M +++ +T V+
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 245 LSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVL 304
++L+ + +G ++H ++S + V I++A++ MY KCG A+++F+G+ RNVV
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304
Query: 305 WTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIE 364
W +M+ A QNE +EA+ +F M E ++P + + L++ A L L G +H
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 365 KSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALT 424
+ G ++ V N+LI+MY K ++ A +F ++ R +++WNAMI G++ +G +AL
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 425 LFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLL 484
F M + +P+ T+V V++A L + + +M+ + + T +V +
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-LDKNVFVTTALVDMY 483
Query: 485 SKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMD-----PND 539
+K G + A + + + V W+ +++ H GFG+ E M PN
Sbjct: 484 AKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH---GFGKAALELFEEMQKGTIKPNG 539
Query: 540 V 540
V
Sbjct: 540 V 540
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/648 (38%), Positives = 374/648 (57%), Gaps = 27/648 (4%)
Query: 67 NVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV 126
+V N++++ YA+ + AR +FD M ++N VS+++L++ Y+ N + E LFK
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--- 212
Query: 127 SGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDV 186
S +N + + +L + + E RQ F S V N ++ Y + +
Sbjct: 213 SRENWALVSW--NCLLGGFVKKKKIVEARQ----FFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 187 EMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVS-GSVRWDSVTYVNAFGL 245
+ A++L D P DVF + ++++G I+N E+ KM V W+++ L
Sbjct: 267 DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM-------L 319
Query: 246 SASLKDLKLGLQVHSQMLKS--DIEP--DVFINSAMISMYGKCGKFSNAKKVFEGLETRN 301
+ ++ ++ +M K D+ P +V + MI+ Y +CGK S AK +F+ + R+
Sbjct: 320 AGYVQGERM------EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 302 VVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHA 361
V W AM+A Q+ + EAL LF ME E R N +F+ L++ A + AL G LH
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 362 HIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGRE 421
+ K G++ VGNAL+ MY K G+IE AN +F +M +DI++WN MI GYS HG G
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 422 ALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIV 481
AL F++M +P+ T V VLSAC H GLV +G Y + + G++P +HY C+V
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 482 GLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVG 541
LL +AGLL++A M++ P + D W TLL ASRVH N A+ I M+P + G
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSG 613
Query: 542 TYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQ 601
Y+LLSN+YA RW V K+R M+ + VKK PG SW EI+N TH F GD HPE +
Sbjct: 614 MYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDE 673
Query: 602 IYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPIL 661
I+ + EL ++K GYV + VLHDVE+E+KE + +HSE+LA+AY +M PI
Sbjct: 674 IFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIR 733
Query: 662 VIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
VIKNLR+C+DCH+A+K ++++T R II+RD NRFH F+DG CSC DYW
Sbjct: 734 VIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 213/486 (43%), Gaps = 52/486 (10%)
Query: 30 VEDTLKLLKHSADSKDLKLGKVIHAHL--------IITTESSRNENVVLTNSLVNLYAKC 81
V+D + + D+ ++ A++ + +S N +V N L+ + K
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 82 NQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKN-----------MVSG-- 128
+I ARQ FD+M R+VVS+++++T Y +G + E +LF MVSG
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 129 ------------DNL-EPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVR-- 173
D + E NE ++ +L+ + R ++ ++ C+ V
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF------DVMPCRNVSTW 346
Query: 174 NALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVR 233
N ++ Y +C + AK L D +P D + +++ G ++ + + +M R
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 234 WDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKV 293
+ ++ +A A + L+LG Q+H +++K E F+ +A++ MY KCG A +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 294 FEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSAL 353
F+ + +++V W M+A ++ + E AL F M+ E ++P++ T +L++ + +
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 354 RHG-DLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYR-DIITWNAMIC 411
G + + G + ++++ + G +E A+ + +M + D W ++
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 412 GYSHHGLGREALTLFQNMLAAEERPN--HVTFVGVLSACGHLGLVQEGFYYLNHLMKQIG 469
HG A T + A E + +V + ++ G G V + L M+ G
Sbjct: 587 ASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGK----LRVRMRDKG 642
Query: 470 I--VPG 473
+ VPG
Sbjct: 643 VKKVPG 648
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 153/376 (40%), Gaps = 61/376 (16%)
Query: 138 FSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLP 197
+++ +SS R+GR E + VFK + N ++ Y + + E+A++L D +P
Sbjct: 67 WNVAISSYMRTGRCNEALR----VFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 198 GYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQ 257
D+ +N ++ G + N E+ M
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMP----------------------------- 153
Query: 258 VHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEY 317
E DV + M+S Y + G +A+ VF+ + +N V W A+++A QN
Sbjct: 154 ----------ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSK 203
Query: 318 FEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNA 377
EEA LF E A+ + + A + D ++ ++ N
Sbjct: 204 MEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR--------DVVSWNT 255
Query: 378 LINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPN 437
+I YA+ G I+ A ++F + +D+ TW AM+ GY + + EA LF M ER N
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM---PER-N 311
Query: 438 HVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFM 497
V++ +L+ G VQ + + + + + ++ ++ G + EA+
Sbjct: 312 EVSWNAMLA-----GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 498 RSTPVKWDVVAWHTLL 513
P K D V+W ++
Sbjct: 367 DKMP-KRDPVSWAAMI 381
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 45/173 (26%)
Query: 376 NALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHH---GLGREALTLF------ 426
N +I+ Y + G E A K+F +M RD+++WN MI GY + G RE +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 427 ----------QNMLAAEERP--------NHVTFVGVLSACGHLGLVQEGFYYLNHLMKQI 468
QN + R N V++ +LSA Y N M++
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA-----------YVQNSKMEEA 207
Query: 469 GIV------PGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNA 515
++ L + C++G K + EA +F S V+ DVV+W+T++
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITG 259
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/664 (34%), Positives = 387/664 (58%), Gaps = 11/664 (1%)
Query: 50 KVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWY 109
K IHA L++ + L L++ + I+ ARQ+FD++ + + +++++ Y
Sbjct: 38 KQIHARLLVL---GLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 110 LHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFC 169
N + L ++ NM + P+ + F +L +CS GR H VF+ G
Sbjct: 95 SRNNHFQDALLMYSNMQLA-RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 170 KYVRNALVELYTKCLDVEMAKRLLD--LLPGYDVFEYNSVLNGLIENECFRGGVEVLGKM 227
+V+N L+ LY KC + A+ + + LP + + ++++ +N +E+ +M
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 228 VSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKS--DIEPDVFINSAMISMYGKCG 285
V+ D V V+ L+DLK G +H+ ++K +IEPD+ I ++ +MY KCG
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCG 271
Query: 286 KFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLN 345
+ + AK +F+ +++ N++LW AM++ +N Y EA+++F M + +RP+ + ++
Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 346 SAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIIT 405
+ A + +L ++ ++ +S +++ + + +ALI+M+AK G++E A VF RD++
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 406 WNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLM 465
W+AMI GY HG REA++L++ M PN VTF+G+L AC H G+V+EG+++ N M
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR-M 450
Query: 466 KQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFG 525
I P +HY C++ LL +AG LD+A + ++ PV+ V W LL+A + H++ G
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 526 RRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNT 585
A+ + +DP++ G Y+ LSN+YA + WD V+++R MK + + K+ G SW E+R
Sbjct: 511 EYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570
Query: 586 THVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKL 645
F GD +HP +I +V + +++K G+V + A LHD+ DE+ E+ L HSE++
Sbjct: 571 LEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERI 630
Query: 646 AIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSC 705
AIAY L+ TP P+ + KNLR C +CH+A KLISKL R+I+VRDTNRFH F+DG CSC
Sbjct: 631 AIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSC 690
Query: 706 TDYW 709
DYW
Sbjct: 691 GDYW 694
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 26/403 (6%)
Query: 152 AEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGL 211
A+ +Q H + GL F ++ L+ + D+ A+++ D LP +F +N+++ G
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 212 IENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDV 271
N F+ + + M V DS T+ + + L L++G VH+Q+ + + DV
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 272 FINSAMISMYGKCGKFSNAKKVFEG--LETRNVVLWTAMVAACFQNEYFEEALNLFCGME 329
F+ + +I++Y KC + +A+ VFEG L R +V WTA+V+A QN EAL +F M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 330 YEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIE 389
++P+ +LN+ L L+ G +HA + K G + + +L MYAK G +
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 390 AANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACG 449
A +F M+ ++I WNAMI GY+ +G REA+ +F M+ + RP+ ++ +SAC
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 450 HLGLVQEGFYYLNHLMKQIGIVPGLEHY-------TCIVGLLSKAGLLDEAEKFMRSTPV 502
+G +++ ++ G Y + ++ + +K G + E + + +
Sbjct: 335 QVGSLEQARSMYEYV--------GRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTL 385
Query: 503 KWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMD-----PNDV 540
DVV W ++ +H G R M+ PNDV
Sbjct: 386 DRDVVVWSAMIVGYGLH---GRAREAISLYRAMERGGVHPNDV 425
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/646 (34%), Positives = 372/646 (57%), Gaps = 2/646 (0%)
Query: 65 NENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKN 124
N + ++N L+ Y + ++ +A LF+ + +++ V++++L+T Y +G E++ LF
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 125 MVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCL 184
M + +P+++ FS VL + A G+Q H +G V N +++ Y+K
Sbjct: 241 MRQSGH-QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 185 DVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFG 244
V + L D +P D YN V++ + + + + +M + +
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 245 LSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVL 304
++A+L L++G Q+H Q L + + + + ++++ MY KC F A+ +F+ L R V
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS 419
Query: 305 WTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIE 364
WTA+++ Q L LF M +R ++ TFA +L ++A ++L G LHA I
Sbjct: 420 WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 365 KSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALT 424
+SG E++ G+ L++MYAK G+I+ A +VF +M R+ ++WNA+I ++ +G G A+
Sbjct: 480 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Query: 425 LFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLL 484
F M+ + +P+ V+ +GVL+AC H G V++G Y + GI P +HY C++ LL
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599
Query: 485 SKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDP-NDVGTY 543
+ G EAEK M P + D + W ++LNA R+H+N R AE + M+ D Y
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 544 ILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIY 603
+ +SN+YA W+ V ++K M+ R +KK P SW E+ + HVF S D HP +I
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIV 719
Query: 604 EKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVI 663
K+ EL+A+I+ GY PD ++V+ DV+++ K + L +HSE+LA+A+AL+ TP PI+V+
Sbjct: 720 RKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVM 779
Query: 664 KNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
KNLR C DCH+A+KLISK+ KR+I VRDT+RFH F +G CSC DYW
Sbjct: 780 KNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 217/464 (46%), Gaps = 8/464 (1%)
Query: 65 NENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKN 124
++N V TN++++ + K +S AR LFD M R VV+++ LM WY N E KLF+
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 125 MVSGDNLE-PNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKY--VRNALVELYT 181
M + P+ F+ +L C+ + Q H + K G + V N L++ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 182 KCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVN 241
+ +++A L + +P D +N+++ G ++ + + + KM + T+
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 242 AFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRN 301
L D LG Q+H+ + + D + + ++ Y K + + +F+ + +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 302 VVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHA 361
V + ++++ Q + +E +L+ F M+ F FA ML+ AA LS+L+ G LH
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 362 HIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGRE 421
+ L VGN+L++MYAK E A +F + R ++W A+I GY GL
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 422 ALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIV 481
L LF M + R + TF VL A + G L+ + + G + + + +V
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLV 494
Query: 482 GLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFG 525
+ +K G + +A + P + + V+W+ L++A H + G G
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA---HADNGDG 534
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 13/184 (7%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
+LK SA L LGK +HA +I S ENV + LV++YAKC I A Q+F+ M
Sbjct: 458 VLKASASFASLLLGKQLHAFII---RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSG---RGA 152
RN VS+++L++ + NG + F M+ L+P+ VL++CS G +G
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIES-GLQPDSVSILGVLTACSHCGFVEQGT 573
Query: 153 EGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLI 212
E Q ++ G+ K +++L + A++L+D +P FE + ++ +
Sbjct: 574 EYFQAMSPIY--GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP----FEPDEIMWSSV 627
Query: 213 ENEC 216
N C
Sbjct: 628 LNAC 631
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 33/121 (27%)
Query: 361 AHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICG-------- 412
A I K+GF N ++ + G + AA KV+ +M +++ ++ N MI G
Sbjct: 37 ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVS 96
Query: 413 -----------------------YSHHGLGREALTLFQNMLAAEE--RPNHVTFVGVLSA 447
Y+ + EA LF+ M + P+HVTF +L
Sbjct: 97 SARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Query: 448 C 448
C
Sbjct: 157 C 157
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/685 (35%), Positives = 402/685 (58%), Gaps = 17/685 (2%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKC-NQISIARQLFDNM 94
+++ ++S + +G+V L+ T +V + SL++++ K N A ++FD M
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHF--ESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 95 RQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV-SGDNLEPNEYIFSIVLSSCSRSGRGAE 153
+ NVV+++ ++T + GF E ++ F +MV SG E +++ S V S+C+ +
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLSL 287
Query: 154 GRQCHGYVFKSGLVFCKYVRNALVELYTKCL---DVEMAKRLLDLLPGYDVFEYNSVLNG 210
G+Q H + +SGLV V +LV++Y KC V+ +++ D + + V + +++ G
Sbjct: 288 GKQLHSWAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 211 LIEN-ECFRGGVEVLGKMVS-GSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIE 268
++N + + +M++ G V + T+ +AF +L D ++G QV Q K +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 269 PDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGM 328
+ + +++ISM+ K + +A++ FE L +N+V + + +N FE+A L +
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 329 EYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNI 388
+ + FTFA +L+ A + ++R G+ +H+ + K G + V NALI+MY+K G+I
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 389 EAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSAC 448
+ A++VF+ M R++I+W +MI G++ HG L F M+ +PN VT+V +LSAC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 449 GHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVA 508
H+GLV EG+ + N + + I P +EHY C+V LL +AGLL +A +F+ + P + DV+
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 509 WHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKV 568
W T L A RVH N G+ A IL +DPN+ YI LSN+YA +W+ +++R+ MK
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 569 RKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHD 628
R + KE G SW E+ + H F GD+ HP + QIY+++ L +IK GYVPD VLH
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHK 765
Query: 629 VEDEQKED----YLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTK 684
+E+E E L HSEK+A+A+ L+ T + P+ V KNLR+C DCH+A+K IS ++
Sbjct: 766 LEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSG 825
Query: 685 RDIIVRDTNRFHRFQDGCCSCTDYW 709
R+I++RD NRFH F+DG CSC DYW
Sbjct: 826 REIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 261/530 (49%), Gaps = 32/530 (6%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
LLK ++D +LGK++HA LI E + VL NSL++LY+K + A +F+ MR
Sbjct: 68 LLKSCIRARDFRLGKLVHARLI---EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 96 ---QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGA 152
+R+VVS+S++M Y +NG L+ +K+F + L PN+Y ++ V+ +CS S
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL-GLVPNDYCYTAVIRACSNSDFVG 183
Query: 153 EGRQCHGYVFKSGLVFCKY-VRNALVELYTKCLD-VEMAKRLLDLLPGYDVFEYNSVLNG 210
GR G++ K+G V +L++++ K + E A ++ D + +V + ++
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 211 LIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPD 270
++ R + MV D T + F A L++L LG Q+HS ++S + D
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 271 VFINSAMISMYGKC---GKFSNAKKVFEGLETRNVVLWTAMVAACFQN-EYFEEALNLFC 326
V +++ MY KC G + +KVF+ +E +V+ WTA++ +N EA+NLF
Sbjct: 304 V--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 327 GMEYEA-IRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKG 385
M + + PN FTF+ + LS R G + K G + V N++I+M+ K
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 386 GNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVL 445
+E A + F + ++++++N + G + +A L + E + TF +L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 446 SACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEK---FMRSTPV 502
S ++G +++G + ++K +G+ ++ + SK G +D A + FM +
Sbjct: 482 SGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-- 538
Query: 503 KWDVVAWHTLLNASRVHQNYGFGRRIAEYILHM-----DPNDVGTYILLS 547
+V++W +++ H GF R+ E M PN+V +LS
Sbjct: 539 --NVISWTSMITGFAKH---GFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 194/410 (47%), Gaps = 15/410 (3%)
Query: 124 NMVSGDNLEPNEYI-FSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTK 182
++++ D + P + + FS +L SC R+ G+ H + + + + N+L+ LY+K
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 183 CLDVEMAKRLLDLLPGY---DVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTY 239
D A+ + + + + DV +++++ N ++V + + + + Y
Sbjct: 110 SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 240 VNAFGLSASLKDLKLGLQVHSQMLKSD-IEPDVFINSAMISMYGKC-GKFSNAKKVFEGL 297
++ + +G ++K+ E DV + ++I M+ K F NA KVF+ +
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 298 ETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGD 357
NVV WT M+ C Q + EA+ F M ++FT + + ++ A L L G
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 358 LLHAHIEKSGFKEHLIVGNALINMYAK---GGNIEAANKVFSDMRYRDIITWNAMICGYS 414
LH+ +SG + V +L++MYAK G+++ KVF M +++W A+I GY
Sbjct: 290 QLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 415 HH-GLGREALTLFQNMLA-AEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVP 472
+ L EA+ LF M+ PNH TF ACG+L + G L K+ G+
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLAS 406
Query: 473 GLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNY 522
++ + K+ +++A++ S K ++V+++T L+ + + N+
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNF 455
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 8/242 (3%)
Query: 217 FRGGVEVLGKMVSGSVR-WDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINS 275
RG V L M +R DSVT+ + +D +LG VH+++++ DIEPD + +
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 276 AMISMYGKCGKFSNAKKVFEGLE---TRNVVLWTAMVAACFQNEYFE-EALNLFCGMEYE 331
++IS+Y K G + A+ VFE + R+VV W+AM+ AC+ N E +A+ +F
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM-ACYGNNGRELDAIKVFVEFLEL 160
Query: 332 AIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSG-FKEHLIVGNALINMYAKGGN-IE 389
+ PN++ + ++ + + + G + + K+G F+ + VG +LI+M+ KG N E
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 390 AANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACG 449
A KVF M +++TW MI G REA+ F +M+ + + T V SAC
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 450 HL 451
L
Sbjct: 281 EL 282
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/701 (32%), Positives = 392/701 (55%), Gaps = 6/701 (0%)
Query: 9 SPQAATRCAPFLFKQNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENV 68
SP ++ L K P+ + ++ +D + G+VIH ++ + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV---DGCDSEL 154
Query: 69 VLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSG 128
+L +++V +Y K ++ AR++FD M +++ + ++++++ Y N +E++++F+++++
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 129 DNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEM 188
+ +L + + G Q H K+G YV + LY+KC ++M
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 189 AKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSAS 248
L D+ YN++++G N + + +++ R S T V+ +S
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG- 333
Query: 249 LKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAM 308
L L +H LKS+ +++A+ ++Y K + +A+K+F+ +++ W AM
Sbjct: 334 --HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 309 VAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGF 368
++ QN E+A++LF M+ PN T +L++ A L AL G +H + + F
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 369 KEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQN 428
+ + V ALI MYAK G+I A ++F M ++ +TWN MI GY HG G+EAL +F
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 429 MLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAG 488
ML + P VTF+ VL AC H GLV+EG N ++ + G P ++HY C+V +L +AG
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571
Query: 489 LLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSN 548
L A +F+ + ++ W TLL A R+H++ R ++E + +DP++VG ++LLSN
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 631
Query: 549 MYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRE 608
+++ ++ + + +R+ K RK+ K PG + EI T HVF SGD +HP+ +IYEK+ +
Sbjct: 632 IHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEK 691
Query: 609 LSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRM 668
L K++ GY P+ LHDVE+E++E + HSE+LAIA+ L+ T P I +IKNLR+
Sbjct: 692 LEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRV 751
Query: 669 CDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
C DCH+ KLISK+T+R I+VRD NRFH F+DG CSC DYW
Sbjct: 752 CLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 233/468 (49%), Gaps = 9/468 (1%)
Query: 53 HAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHN 112
HA +I+ RN+ +LT L + I AR +F ++++ +V ++ LM + N
Sbjct: 40 HAQIIL--HGFRNDISLLTK-LTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVN 96
Query: 113 GFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYV 172
+L +F ++ +L+PN ++ +S+ S GR HG G +
Sbjct: 97 ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 173 RNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGS- 231
+ +V++Y K VE A+++ D +P D +N++++G +NE + ++V +++ S
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 232 VRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAK 291
R D+ T ++ A L++L+LG+Q+HS K+ ++ + IS+Y KCGK
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 292 KVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLS 351
+F ++V + AM+ N E +L+LF + R T ++ + L
Sbjct: 277 ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 352 ALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMIC 411
+ +H + KS F H V AL +Y+K IE+A K+F + + + +WNAMI
Sbjct: 337 LIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 412 GYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIV 471
GY+ +GL +A++LF+ M +E PN VT +LSAC LG + G +++ L++
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFE 452
Query: 472 PGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVH 519
+ T ++G+ +K G + EA + K + V W+T+++ +H
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLF-DLMTKKNEVTWNTMISGYGLH 499
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/591 (36%), Positives = 352/591 (59%), Gaps = 1/591 (0%)
Query: 119 LKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVE 178
L+ N + G + + ++ +L C+ +GR H ++ +S + N L+
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 179 LYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVT 238
+Y KC +E A+++ + +P D + ++++G +++ + +M+ + T
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 239 YVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLE 298
+ +A+ + G Q+H +K + +V + SA++ +Y + G +A+ VF+ LE
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 299 TRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDL 358
+RN V W A++A + E+AL LF GM + RP+ F++A + + + L G
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 359 LHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGL 418
+HA++ KSG K GN L++MYAK G+I A K+F + RD+++WN+++ Y+ HG
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 419 GREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYT 478
G+EA+ F+ M RPN ++F+ VL+AC H GL+ EG++Y LMK+ GIVP HY
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE-LMKKDGIVPEAWHYV 402
Query: 479 CIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPN 538
+V LL +AG L+ A +F+ P++ W LLNA R+H+N G AE++ +DP+
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD 462
Query: 539 DVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPE 598
D G +++L N+YA RW+ +++RK MK VKKEP SW EI N H+F++ D HP+
Sbjct: 463 DPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQ 522
Query: 599 SSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTA 658
+I K E+ AKIK LGYVPD + V+ V+ +++E L +HSEK+A+A+AL+ TPP +
Sbjct: 523 REEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGS 582
Query: 659 PILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
I + KN+R+C DCH+A+KL SK+ R+IIVRDTNRFH F+DG CSC DYW
Sbjct: 583 TIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 191/376 (50%), Gaps = 5/376 (1%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
LLK K L G+++HAH++ +S ++V+ N+L+N+YAKC + AR++F+ M
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHIL---QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
QR+ V++++L++ Y + + L F M+ PNE+ S V+ + + RG G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE 215
Q HG+ K G +V +AL++LYT+ ++ A+ + D L + +N+++ G
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 216 CFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINS 275
+E+ M+ R +Y + FG +S L+ G VH+ M+KS + F +
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 276 AMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRP 335
++ MY K G +A+K+F+ L R+VV W +++ A Q+ + +EA+ F M IRP
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 336 NEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVF 395
NE +F +L + + L G + ++K G ++++ + G++ A +
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 396 SDMRYRDIIT-WNAMI 410
+M W A++
Sbjct: 422 EEMPIEPTAAIWKALL 437
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/638 (36%), Positives = 369/638 (57%), Gaps = 5/638 (0%)
Query: 74 LVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLF-KNMVSGDNLE 132
LV +Y K + + AR++FD M R+ VSY++++ YL + E++++F +N+ D +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL---DQFK 304
Query: 133 PNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRL 192
P+ S VL +C + + + Y+ K+G V VRN L+++Y KC D+ A+ +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 193 LDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDL 252
+ + D +NS+++G I++ +++ M+ + D +TY+ +S L DL
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 253 KLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAAC 312
K G +HS +KS I D+ +++A+I MY KCG+ ++ K+F + T + V W +++AC
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 313 FQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHL 372
+ F L + M + P+ TF V L A L+A R G +H + + G++ L
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 373 IVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAA 432
+GNALI MY+K G +E +++VF M RD++TW MI Y +G G +AL F +M +
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 433 EERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDE 492
P+ V F+ ++ AC H GLV EG + I P +EHY C+V LLS++ + +
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 493 AEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAK 552
AE+F+++ P+K D W ++L A R + R++ I+ ++P+D G IL SN YA
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 724
Query: 553 EKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAK 612
++WD VS IRK +K + + K PG SW E+ HVF SGD + P+S IY+ + L +
Sbjct: 725 LRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSL 784
Query: 613 IKPLGYVPDVAAVLHDV-EDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDD 671
+ GY+PD V ++ E+E+K + HSE+LAIA+ L+ T P P+ V+KNLR+C D
Sbjct: 785 MAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGD 844
Query: 672 CHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
CH KLISK+ R+I+VRD NRFH F+DG CSC D W
Sbjct: 845 CHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 246/490 (50%), Gaps = 8/490 (1%)
Query: 41 ADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR-QRNV 99
+ S +L + IHA +I S + + L++ Y+ + + + +F + +NV
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSD---FFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 100 VSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHG 159
++S++ + NG E L+ + + + P++Y F V+ +C+ G +
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRES-KVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 160 YVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRG 219
+ G +V NALV++Y++ + A+++ D +P D+ +NS+++G + +
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 220 GVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMIS 279
+E+ ++ + + DS T + +L +K G +H LKS + V +N+ +++
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 280 MYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFT 339
MY K + ++A++VF+ ++ R+ V + M+ + E EE++ +F + +P+ T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLT 309
Query: 340 FAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMR 399
+ +L + L L ++ ++ K+GF V N LI++YAK G++ A VF+ M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 400 YRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFY 459
+D ++WN++I GY G EA+ LF+ M+ EE+ +H+T++ ++S L ++ G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 460 YLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVH 519
++ +K GI L ++ + +K G + ++ K S D V W+T+++A
Sbjct: 430 LHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRF 487
Query: 520 QNYGFGRRIA 529
++ G ++
Sbjct: 488 GDFATGLQVT 497
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/710 (32%), Positives = 385/710 (54%), Gaps = 41/710 (5%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
L+K+ K K +HA I T S ++ +++Y + A LF ++
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIV----ISIYTNLKLLHEALLLFKTLK 66
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
V+++ S++ + + L F M + P+ +F VL SC+ G
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGE 125
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLD------------------------------ 185
HG++ + G+ Y NAL+ +Y K L
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 186 ------VEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTY 239
++ +R+ +++P DV YN+++ G ++ + + ++ +M + ++ DS T
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 240 VNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLET 299
+ + + D+ G ++H +++ I+ DV+I S+++ MY K + ++++VF L
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 300 RNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLL 359
R+ + W ++VA QN + EAL LF M ++P F+ ++ + A L+ L G L
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 360 HAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLG 419
H ++ + GF ++ + +AL++MY+K GNI+AA K+F M D ++W A+I G++ HG G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 420 REALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTC 479
EA++LF+ M +PN V FV VL+AC H+GLV E + Y N + K G+ LEHY
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 480 IVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPND 539
+ LL +AG L+EA F+ V+ W TLL++ VH+N ++AE I +D +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 540 VGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPES 599
+G Y+L+ NMYA RW ++K+R M+ + ++K+P SW E++N TH F+SGD +HP
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 600 SQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAP 659
+I E ++ + +++ GYV D + VLHDV++E K + L HSE+LA+A+ ++ T P
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665
Query: 660 ILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
I V KN+R+C DCH A+K ISK+T+R+IIVRD +RFH F G CSC DYW
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/678 (34%), Positives = 385/678 (56%), Gaps = 19/678 (2%)
Query: 46 LKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSL 105
L +GK +HA+ + E N + N+LV +Y K +++ ++ L + R++V+++++
Sbjct: 218 LMMGKQVHAYGLRKGEL----NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 106 MTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSG 165
++ N LLE L+ + MV + +EP+E+ S VL +CS G++ H Y K+G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVL-EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 166 -LVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEV- 223
L +V +ALV++Y C V +R+ D + + +N+++ G +NE + + +
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 224 LGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGK 283
+G S + +S T +H ++K ++ D F+ + ++ MY +
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 284 CGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGME-----------YEA 332
GK A ++F +E R++V W M+ +E+ E+AL L M+ +
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 333 IRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAAN 392
++PN T +L S A LSAL G +HA+ K+ + VG+AL++MYAK G ++ +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 393 KVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLG 452
KVF + +++ITWN +I Y HG G+EA+ L + M+ +PN VTF+ V +AC H G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 453 LVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVV-AWHT 511
+V EG + G+ P +HY C+V LL +AG + EA + M P ++ AW +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 512 LLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKV 571
LL ASR+H N G A+ ++ ++PN Y+LL+N+Y+ WD +++R+ MK + V
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 572 KKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVED 631
+KEPG SW E + H F++GDS+HP+S ++ + L +++ GYVPD + VLH+VE+
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 632 EQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRD 691
++KE L HSEKLAIA+ ++ T P I V KNLR+C+DCH A K ISK+ R+II+RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 692 TNRFHRFQDGCCSCTDYW 709
RFHRF++G CSC DYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 225 bits (574), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 153/507 (30%), Positives = 254/507 (50%), Gaps = 32/507 (6%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
LLK AD +D++LGK IHAH + ++V + N+LVNLY KC ++FD +
Sbjct: 103 LLKAVADLQDMELGKQIHAH--VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS 160
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAE-- 153
+RN VS++SL++ L+ F+ M+ +N+EP+ + V+++CS
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 154 -GRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLI 212
G+Q H Y + G ++ N LV +Y K + +K LL G D+ +N+VL+ L
Sbjct: 220 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 213 ENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKS-DIEPDV 271
+NE +E L +MV V D T + + L+ L+ G ++H+ LK+ ++ +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 272 FINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYE 331
F+ SA++ MY C + + ++VF+G+ R + LW AM+A QNE+ +EAL LF GME
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 332 A-IRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEA 390
A + N T A ++ + A + +H + K G V N L++MY++ G I+
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 391 ANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEE-----------RPNHV 439
A ++F M RD++TWN MI GY +AL L M E +PN +
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 440 TFVGVLSACGHLGLVQEG-----FYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAE 494
T + +L +C L + +G + N+L + + L V + +K G L +
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL------VDMYAKCGCLQMSR 572
Query: 495 KFMRSTPVKWDVVAWHTLLNASRVHQN 521
K P K +V+ W+ ++ A +H N
Sbjct: 573 KVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 232/483 (48%), Gaps = 31/483 (6%)
Query: 43 SKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSY 102
S+ L + H +L+ T +S E+V + +S A +F + + R+ +
Sbjct: 19 SQLLPFSRHKHPYLLRATPTSATEDVA------------SAVSGAPSIFIS-QSRSPEWW 65
Query: 103 SSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVF 162
L+ + + L E + + +M+ ++P+ Y F +L + + G+Q H +V+
Sbjct: 66 IDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 163 KSGL-VFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGV 221
K G V V N LV LY KC D ++ D + + +NS+++ L E + +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 222 EVLGKMVSGSVRWDSVTYVNAFGLSASL---KDLKLGLQVHSQMLKSDIEPDVFINSAMI 278
E M+ +V S T V+ ++L + L +G QVH+ L+ E + FI + ++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 279 SMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEF 338
+MYGK GK +++K + R++V W ++++ QNE EAL M E + P+EF
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 339 TFAVMLNSAAGLSALRHGDLLHAHIEKSG-FKEHLIVGNALINMYAKGGNIEAANKVFSD 397
T + +L + + L LR G LHA+ K+G E+ VG+AL++MY + + +VF
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 398 MRYRDIITWNAMICGYSHHGLGREALTLFQNM-LAAEERPNHVTFVGVLSACGHLGLVQE 456
M R I WNAMI GYS + +EAL LF M +A N T GV+ AC V+
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC-----VRS 418
Query: 457 GFYYLNHLMKQIGIVPGLEH----YTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTL 512
G + + + GL+ ++ + S+ G +D A + + D+V W+T+
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTM 477
Query: 513 LNA 515
+
Sbjct: 478 ITG 480
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 253/687 (36%), Positives = 376/687 (54%), Gaps = 43/687 (6%)
Query: 29 SVEDTLKLLKHSADS-KDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIA 87
S ++T+ LL D+ D++ + +H+ +I+ E R N L L+ YA ++ A
Sbjct: 37 SPQETVFLLGQVLDTYPDIRTLRTVHSRIIL--EDLRC-NSSLGVKLMRAYASLKDVASA 93
Query: 88 RQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSR 147
R++FD + +RNV+ + ++ Y++NGF E +K+F M G N+ P+ Y F VL +CS
Sbjct: 94 RKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSC 152
Query: 148 SGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSV 207
SG GR+ HG K GL +V N LV +Y KC + A+ +LD + DV +NS+
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 208 LNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDI 267
+ G +N+ F +EV +M S + D+ G ASL
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDA-------GTMASLL----------------- 248
Query: 268 EPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCG 327
P V + MY K +F + +++V W M+ +N EA+ L+
Sbjct: 249 -PAVSNTTTENVMY--------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 328 MEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGN 387
ME + P+ + +L + SAL G +H +IE+ +L++ NALI+MYAK G
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 388 IEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSA 447
+E A VF +M+ RD+++W AMI Y G G +A+ LF + + P+ + FV L+A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 448 CGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVV 507
C H GL++EG + I P LEH C+V LL +AG + EA +F++ ++ +
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER 479
Query: 508 AWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMK 567
W LL A RVH + G A+ + + P G Y+LLSN+YAK RW+ V+ IR +MK
Sbjct: 480 VWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMK 539
Query: 568 VRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLH 627
+ +KK PG+S E+ H F+ GD +HP+S +IY ++ L K+K LGYVPD + LH
Sbjct: 540 SKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALH 599
Query: 628 DVEDEQKEDYLNHHSEKLAIAYALMETP-----PTAPILVIKNLRMCDDCHSAVKLISKL 682
DVE+E KE +L HSEKLAI +ALM T I + KNLR+C DCH A KLIS++
Sbjct: 600 DVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQI 659
Query: 683 TKRDIIVRDTNRFHRFQDGCCSCTDYW 709
T R+II+RDTNRFH F+ G CSC DYW
Sbjct: 660 TSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIA 87
P +L D+ L LGK IH ++ N++L N+L+++YAKC + A
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYI---ERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 88 RQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSR 147
R +F+NM+ R+VVS++++++ Y +G + + LF + L P+ F L++CS
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAFVTTLAACSH 422
Query: 148 SGRGAEGRQC 157
+G EGR C
Sbjct: 423 AGLLEEGRSC 432
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/663 (33%), Positives = 378/663 (57%), Gaps = 7/663 (1%)
Query: 49 GKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTW 108
G+ +H ++ + RN + NSLV Y K ++ AR++FD M +R+V+S++S++
Sbjct: 214 GEQLHGFILKSGFGERNS---VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 109 YLHNGFLLETLKLFKNM-VSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLV 167
Y+ NG + L +F M VSG +E + V + C+ S + GR H K+
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSG--IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 168 FCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKM 227
N L+++Y+KC D++ AK + + V Y S++ G V++ +M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 228 VSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKF 287
+ D T A + L G +VH + ++D+ D+F+++A++ MY KCG
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 288 SNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLF-CGMEYEAIRPNEFTFAVMLNS 346
A+ VF + ++++ W ++ +N Y EAL+LF +E + P+E T A +L +
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 347 AAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITW 406
A LSA G +H +I ++G+ V N+L++MYAK G + A+ +F D+ +D+++W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 407 NAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMK 466
MI GY HG G+EA+ LF M A + ++FV +L AC H GLV EG+ + N +
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 467 QIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGR 526
+ I P +EHY CIV +L++ G L +A +F+ + P+ D W LL R+H +
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 527 RIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTT 586
++AE + ++P + G Y+L++N+YA+ ++W+ V ++RK + R ++K PG SW EI+
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 587 HVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLA 646
++F++GDS++PE+ I +R++ A++ GY P L D E+ +KE+ L HSEKLA
Sbjct: 749 NIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLA 808
Query: 647 IAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCT 706
+A ++ + I V KNLR+C DCH K +SKLT+R+I++RD+NRFH+F+DG CSC
Sbjct: 809 MALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCR 868
Query: 707 DYW 709
+W
Sbjct: 869 GFW 871
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 253/500 (50%), Gaps = 26/500 (5%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVN----LYAKCNQISIARQLF 91
+L+ ADSK LK GK + + R V+ ++L + +Y C + A ++F
Sbjct: 100 VLQLCADSKSLKDGKEVDNFI-------RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 92 DNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCS--RSG 149
D ++ + ++ LM +G ++ LFK M+S +E + Y FS V S S RS
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSV 211
Query: 150 RGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLN 209
G G Q HG++ KSG V N+LV Y K V+ A+++ D + DV +NS++N
Sbjct: 212 HG--GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 210 GLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDI-E 268
G + N G+ V +M+ + D T V+ F A + + LG VHS +K+
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 269 PDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGM 328
D F N+ ++ MY KCG +AK VF + R+VV +T+M+A + EA+ LF M
Sbjct: 330 EDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 329 EYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNI 388
E E I P+ +T +LN A L G +H I+++ + V NAL++MYAK G++
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 389 EAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEER--PNHVTFVGVLS 446
+ A VFS+MR +DII+WN +I GYS + EAL+LF N+L E+R P+ T VL
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLP 507
Query: 447 ACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDV 506
AC L +G ++M+ G +V + +K G L A K D+
Sbjct: 508 ACASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DL 565
Query: 507 VAWHTLLNASRVHQNYGFGR 526
V+W ++ +H GFG+
Sbjct: 566 VSWTVMIAGYGMH---GFGK 582
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 167/376 (44%), Gaps = 42/376 (11%)
Query: 216 CFRGGVEVLGKMVSGSVRWD--SVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFI 273
C G +E K++ S +WD T + L A K LK G +V + + + D +
Sbjct: 72 CESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNL 131
Query: 274 NSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAI 333
S + MY CG A +VF+ ++ + W ++ ++ F ++ LF M +
Sbjct: 132 GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGV 191
Query: 334 RPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANK 393
+ +TF+ + S + L ++ G+ LH I KSGF E VGN+L+ Y K +++A K
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARK 251
Query: 394 VFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGL 453
VF +M RD+I+WN++I GY +GL + L++F ML + + T V V + C L
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 454 VQEGF---------------YYLNHLMKQIGIVPGLE---------------HYTCIVGL 483
+ G + N L+ L+ YT ++
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 484 LSKAGLLDEAEKF---MRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDV 540
++ GL EA K M + DV +LN ++ G+R+ E+I ND+
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI---KENDL 428
Query: 541 GTYILLSN----MYAK 552
G I +SN MYAK
Sbjct: 429 GFDIFVSNALMDMYAK 444
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/697 (34%), Positives = 385/697 (55%), Gaps = 34/697 (4%)
Query: 46 LKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSL 105
L+ K H H+I T S + ++ L + + AR++FD + + N ++++L
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAAL-SSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 106 MTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSG 165
+ Y + ++ F +MVS PN+Y F ++ + + + G+ HG KS
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 166 LVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLG 225
+ +V N+L+ Y C D++ A ++ + DV +NS++NG ++ +E+
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 226 KMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCG 285
KM S V+ VT V A +++L+ G QV S + ++ + ++ + +AM+ MY KCG
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 286 KFSNAKKVFEGLE-------------------------------TRNVVLWTAMVAACFQ 314
+AK++F+ +E +++V W A+++A Q
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 315 NEYFEEALNLFCGMEYEA-IRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLI 373
N EAL +F ++ + ++ N+ T L++ A + AL G +H++I+K G + +
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 374 VGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAE 433
V +ALI+MY+K G++E + +VF+ + RD+ W+AMI G + HG G EA+ +F M A
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 434 ERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEA 493
+PN VTF V AC H GLV E + + GIVP +HY CIV +L ++G L++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 494 EKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKE 553
KF+ + P+ W LL A ++H N +L ++P + G ++LLSN+YAK
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 581
Query: 554 KRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKI 613
+W+ VS++RK M+V +KKEPG S EI H F+SGD+ HP S ++Y K+ E+ K+
Sbjct: 582 GKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 641
Query: 614 KPLGYVPDVAAVLHDVEDEQ-KEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDC 672
K GY P+++ VL +E+E+ KE LN HSEKLAI Y L+ T I VIKNLR+C DC
Sbjct: 642 KSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDC 701
Query: 673 HSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
HS KLIS+L R+IIVRD RFH F++G CSC D+W
Sbjct: 702 HSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/676 (33%), Positives = 378/676 (55%), Gaps = 5/676 (0%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
LLK++ + ++LG+V+HA ++ T +S L N L+N+Y+K + AR +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPP--FLANYLINMYSKLDHPESARLVLRLTP 69
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
RNVVS++SL++ NG L F M + + PN++ F + + G+
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEM-RREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE 215
Q H K G + +V + ++Y K + A++L D +P ++ +N+ ++ + +
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 216 CFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINS 275
R +E + +S+T+ + L LG+Q+H +L+S + DV + +
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 276 AMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRP 335
+I YGKC + +++ +F + T+N V W ++VAA QN E+A L+ + +
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 336 NEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVF 395
++F + +L++ AG++ L G +HAH K+ + + VG+AL++MY K G IE + + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 396 SDMRYRDIITWNAMICGYSHHGLGREALTLFQNML--AAEERPNHVTFVGVLSACGHLGL 453
+M ++++T N++I GY+H G AL LF+ M PN++TFV +LSAC G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 454 VQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLL 513
V+ G + + GI PG EHY+CIV +L +AG+++ A +F++ P++ + W L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 514 NASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKK 573
NA R+H G AE + +DP D G ++LLSN +A RW + +R+ +K +KK
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 574 EPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQ 633
G SW ++N H F + D +H + +I + +L +++ GY PD+ L+D+E+E+
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 608
Query: 634 KEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTN 693
K ++HHSEKLA+A+ L+ P + PI + KNLR+C DCHS K +S KR+IIVRD N
Sbjct: 609 KAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNN 668
Query: 694 RFHRFQDGCCSCTDYW 709
RFHRF+DG CSC DYW
Sbjct: 669 RFHRFKDGICSCKDYW 684
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/646 (36%), Positives = 366/646 (56%), Gaps = 2/646 (0%)
Query: 65 NENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKN 124
+ N + +L+N Y+ C + AR +F+ + +++V ++ +++ Y+ NG+ ++LKL
Sbjct: 178 DSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSC 237
Query: 125 MVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCL 184
M PN Y F L + G + HG + K+ V V L++LYT+
Sbjct: 238 MRMA-GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLG 296
Query: 185 DVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFG 244
D+ A ++ + +P DV ++ ++ +N V++ +M V + T +
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 245 LSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVL 304
A K LG Q+H ++K + D+++++A+I +Y KC K A K+F L ++N V
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 305 WTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIE 364
W ++ +A ++F + E TF+ L + A L+++ G +H
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 365 KSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALT 424
K+ + + V N+LI+MYAK G+I+ A VF++M D+ +WNA+I GYS HGLGR+AL
Sbjct: 477 KTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALR 536
Query: 425 LFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLL 484
+ M + +PN +TF+GVLS C + GL+ +G +++ GI P LEHYTC+V LL
Sbjct: 537 ILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLL 596
Query: 485 SKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYI 544
++G LD+A K + P + V+ W +L+AS N F RR AE IL ++P D TY+
Sbjct: 597 GRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYV 656
Query: 545 LLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYE 604
L+SNMYA K+W V+ IRK MK VKKEPG SW E + H F G S+HP+ I
Sbjct: 657 LVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLING 716
Query: 605 KVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTA-PILVI 663
+ L+ K GYVPD AVL D++DE+K+ L HSE+LA+AY L+ P + IL++
Sbjct: 717 MLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIM 776
Query: 664 KNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
KNLR+C DCHSA+K+IS + +RD+++RD NRFH F G CSC D+W
Sbjct: 777 KNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 228/509 (44%), Gaps = 23/509 (4%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
+L+ D K IH ++ + ++ TN L+N Y K A LFD M
Sbjct: 55 MLRRCIQKNDPISAKAIHCDIL---KKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
+RN VS+ +L Y + + L+ + + E N ++F+ L +
Sbjct: 112 ERNNVSFVTLAQGYACQ----DPIGLYSRL-HREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE 215
H + K G +V AL+ Y+ C V+ A+ + + + D+ + +++ +EN
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 216 CFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINS 275
F +++L M ++ T+ A S L VH Q+LK+ D +
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 276 AMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRP 335
++ +Y + G S+A KVF + +VV W+ M+A QN + EA++LF M + P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 336 NEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVF 395
NEFT + +LN A G+ LH + K GF + V NALI++YAK ++ A K+F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 396 SDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACG-----H 450
+++ ++ ++WN +I GY + G G +A ++F+ L + VTF L AC
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 451 LGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWH 510
LG+ G + K++ + L + + +K G + A+ DV +W+
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSL------IDMYAKCGDIKFAQSVFNEMET-IDVASWN 519
Query: 511 TLLNASRVHQNYGFGRRIAEYILHMDPND 539
L++ H G GR+ + M D
Sbjct: 520 ALISGYSTH---GLGRQALRILDIMKDRD 545
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 192/417 (46%), Gaps = 13/417 (3%)
Query: 113 GFLLETLKLFKNMVSGDNLEP--NEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCK 170
GF ++T L ++ S D++ P + + + +L C + + H + K G
Sbjct: 27 GFSVKTAAL--DLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDL 84
Query: 171 YVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSG 230
+ N L+ Y K + A L D +P + + ++ G + + + ++
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHRE 140
Query: 231 SVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNA 290
+ + + L SL ++ +HS ++K + + F+ +A+I+ Y CG +A
Sbjct: 141 GHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 291 KKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGL 350
+ VFEG+ +++V+W +V+ +N YFE++L L M PN +TF L ++ GL
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 351 SALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMI 410
A +H I K+ + VG L+ +Y + G++ A KVF++M D++ W+ MI
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 411 CGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGI 470
+ +G EA+ LF M A PN T +L+ C +G L+ L+ ++G
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGF 379
Query: 471 VPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRR 527
+ ++ + +K +D A K K + V+W+T++ ++N G G +
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVG---YENLGEGGK 432
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/768 (32%), Positives = 391/768 (50%), Gaps = 111/768 (14%)
Query: 46 LKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQ--------- 96
L+L + +H ++I R + N L+++Y K ++++ ARQLFD + +
Sbjct: 30 LQLARAVHGNIITFGFQPRAH---ILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 97 ------------------------RNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLE 132
R+ V Y++++T + HN + LF M + +
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFK 145
Query: 133 PNEYIFSIVLSSCSRSGRGAEGRQC---HGYVFKSGLVFCKYVRNALVELYTKCLD---- 185
P+ + F+ VL+ + + +QC H KSG + V NALV +Y+KC
Sbjct: 146 PDNFTFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 186 VEMAKRLLD----------------------------LLPGYD----VFEYNSVLNGLIE 213
+ A+++ D LL G D + YN++++G +
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 214 NECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFI 273
++ +E++ +MVS + D TY + A+ L+LG QVH+ +L+ + F
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 274 NSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTA-------------------------- 307
NS ++S+Y KCGKF A+ +FE + +++V W A
Sbjct: 324 NS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 308 -----MVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAH 362
M++ +N + EE L LF M+ E P ++ F+ + S A L A +G HA
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 363 IEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREA 422
+ K GF L GNALI MYAK G +E A +VF M D ++WNA+I HG G EA
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 423 LTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVG 482
+ +++ ML RP+ +T + VL+AC H GLV +G Y + + I PG +HY ++
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 483 LLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGT 542
LL ++G +AE + S P K W LL+ RVH N G A+ + + P GT
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 543 YILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQI 602
Y+LLSNM+A +W+ V+++RKLM+ R VKKE SW E+ H F+ D++HPE+ +
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 603 YEKVRELSAKIKPLGYVPDVAAVLHDVE-DEQKEDYLNHHSEKLAIAYALMETPPTAPIL 661
Y +++L +++ LGYVPD + VLHDVE D KED L HSEK+A+A+ LM+ PP I
Sbjct: 683 YIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIR 742
Query: 662 VIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
+ KNLR C DCH+ + +S + +RDII+RD RFH F++G CSC ++W
Sbjct: 743 IFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 33/130 (25%)
Query: 351 SALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMR----------- 399
++L+ +H +I GF+ + N LI++Y K + A ++F ++
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 400 ----------------------YRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPN 437
RD + +NAMI G+SH+ G A+ LF M +P+
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 438 HVTFVGVLSA 447
+ TF VL+
Sbjct: 148 NFTFASVLAG 157
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/722 (34%), Positives = 379/722 (52%), Gaps = 52/722 (7%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
+ K + ++ G+ HA ++T S NV + N+LV +Y++C +S AR++FD M
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFIS---NVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
+VVS++S++ Y G L++F M + P+ VL C+ G + G+
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGL---- 211
Q H + S ++ +V N LV++Y KC ++ A + + DV +N+++ G
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 212 ---------------------------IENECFRG-GVEVLG---KMVSGSVRWDSVTYV 240
I RG G E LG +M+S ++ + VT +
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 241 NAFGLSASLKDLKLGLQVHSQMLKSDIE--------PDVFINSAMISMYGKCGKFSNAKK 292
+ AS+ L G ++H +K I+ ++ IN +I MY KC K A+
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ-LIDMYAKCKKVDTARA 428
Query: 293 VFEGL--ETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYE--AIRPNEFTFAVMLNSAA 348
+F+ L + R+VV WT M+ Q+ +AL L M E RPN FT + L + A
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 349 GLSALRHGDLLHAH-IEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWN 407
L+ALR G +HA+ + L V N LI+MYAK G+I A VF +M ++ +TW
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 408 AMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQ 467
+++ GY HG G EAL +F M + + VT + VL AC H G++ +G Y N +
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 468 IGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRR 527
G+ PG EHY C+V LL +AG L+ A + + P++ V W L+ R+H G
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668
Query: 528 IAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTH 587
AE I + N G+Y LLSN+YA RW V++IR LM+ + VKK PG SW E T
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728
Query: 588 VFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAI 647
F GD HP + +IY+ + + +IK +GYVP+ LHDV+DE+K+D L HSEKLA+
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLAL 788
Query: 648 AYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTD 707
AY ++ TP A I + KNLR+C DCH+A +S++ DII+RD++RFH F++G CSC
Sbjct: 789 AYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKG 848
Query: 708 YW 709
YW
Sbjct: 849 YW 850
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 230/506 (45%), Gaps = 56/506 (11%)
Query: 70 LTNSLVNLYAKCNQISIARQLFDNMRQRN--VVSYSSLMTWYLHNGFLLETLKLFKNMVS 127
LT+ L++ Y +S A L + V ++SL+ Y NG + L LF M S
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 128 GDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVE 187
+ P+ Y F V +C G H +G + +V NALV +Y++C +
Sbjct: 121 -LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 188 MAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSG-SVRWDSVTYVNAFGLS 246
A+++ D + +DV +NS++ + + +E+ +M + R D++T VN
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 247 ASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWT 306
ASL LG Q+H + S++ ++F+ + ++ MY KCG A VF + ++VV W
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 307 AMVAACFQNEYFEEALNLF------------------------CGMEYEA---------- 332
AMVA Q FE+A+ LF G+ YEA
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 333 -IRPNEFTFAVMLNSAAGLSALRHGDLLHAH-------IEKSGFKEHLIVGNALINMYAK 384
I+PNE T +L+ A + AL HG +H + + K+G + +V N LI+MYAK
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 385 GGNIEAANKVFSDM--RYRDIITWNAMICGYSHHGLGREALTLFQNMLA--AEERPNHVT 440
++ A +F + + RD++TW MI GYS HG +AL L M + RPN T
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 441 FVGVLSACGHLGLVQEG-FYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRS 499
L AC L ++ G + L Q VP L C++ + +K G + +A +
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 500 TPVKWDVVAWHTLLNASRVHQNYGFG 525
K + V W +L+ +H G+G
Sbjct: 539 MMAK-NEVTWTSLMTGYGMH---GYG 560
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/548 (24%), Positives = 227/548 (41%), Gaps = 93/548 (16%)
Query: 176 LVELYTKCLDVEMAKRLLDLLPGYD--VFEYNSVLNGLIENECFRGGVEVLGKMVSGSVR 233
L+ Y + A LL P D V+ +NS++ +N C + + G M S S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 234 WDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKV 293
D+ T+ F + ++ G H+ L + +VF+ +A+++MY +C S+A+KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 294 FEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYE-AIRPNEFTFAVMLNSAAGLSA 352
F+ + +VV W +++ + + + AL +F M E RP+ T +L A L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 353 LRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICG 412
G LH S +++ VGN L++MYAK G ++ AN VFS+M +D+++WNAM+ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 413 YS-----------------------------------HHGLGREALTLFQNMLAAEERPN 437
YS GLG EAL + + ML++ +PN
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 438 HVTFVGVLSACGHLGLVQEG----FYYLNHLMKQIGIVPGLEHYTC--IVGLLSKAGLLD 491
VT + VLS C +G + G Y + + + G E+ ++ + +K +D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 492 EAEKFMRS-TPVKWDVVAWHTLLNASRVHQNYG--------------------------- 523
A S +P + DVV W ++ H +
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 524 ----------FGRRIAEYILHMDPNDVGTYI--LLSNMYAKEKRWDGVSKIRKLMKVRKV 571
G++I Y L N V ++ L +MYAK +S R +
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK---CGSISDARLVFDNMMA 541
Query: 572 KKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVED 631
K E +WT + + G+ E+ I++++R + K+ + + + A H
Sbjct: 542 KNE--VTWTSLMTGYGMHGYGE----EALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 632 EQKEDYLN 639
+Q +Y N
Sbjct: 596 DQGMEYFN 603
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 6/259 (2%)
Query: 258 VHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRN--VVLWTAMVAACFQN 315
+H ++L I + + S +IS Y G S+A + + V W +++ + N
Sbjct: 47 IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 316 EYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVG 375
+ L LF M + P+ +TF + + +S++R G+ HA +GF ++ VG
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 376 NALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEE- 434
NAL+ MY++ ++ A KVF +M D+++WN++I Y+ G + AL +F M
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 435 RPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAE 494
RP+++T V VL C LG G L+ ++ + C+V + +K G++DEA
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 495 KFMRSTPVKWDVVAWHTLL 513
+ VK DVV+W+ ++
Sbjct: 285 TVFSNMSVK-DVVSWNAMV 302
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 136/296 (45%), Gaps = 12/296 (4%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHAHLI-----ITTESSRNENVVLTNSLVNLYAKCN 82
P+ + +L A L GK IH + I + +EN+V+ N L+++YAKC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCK 421
Query: 83 QISIARQLFDNM--RQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGD-NLEPNEYIFS 139
++ AR +FD++ ++R+VV+++ ++ Y +G + L+L M D PN + S
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 140 IVLSSCSRSGRGAEGRQCHGYVFKSGL-VFCKYVRNALVELYTKCLDVEMAKRLLDLLPG 198
L +C+ G+Q H Y ++ +V N L+++Y KC + A+ + D +
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 199 YDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQV 258
+ + S++ G + + + +M + D VT + + + G++
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 259 HSQMLKS-DIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETR-NVVLWTAMVAAC 312
++M + P + ++ + G+ G+ + A ++ E + V+W A ++ C
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/569 (38%), Positives = 336/569 (59%), Gaps = 6/569 (1%)
Query: 142 LSSCSRSGRGA-EGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYD 200
L C S R EG +++ +G ++ N L+ +Y K + A +L D +P +
Sbjct: 67 LIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRN 126
Query: 201 VFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHS 260
V + ++++ + + + +E+L M+ +VR + TY + + D+++ +H
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHC 183
Query: 261 QMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEE 320
++K +E DVF+ SA+I ++ K G+ +A VF+ + T + ++W +++ QN +
Sbjct: 184 GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243
Query: 321 ALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALIN 380
AL LF M+ + T +L + GL+ L G H HI K + + LI+ NAL++
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVD 301
Query: 381 MYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVT 440
MY K G++E A +VF+ M+ RD+ITW+ MI G + +G +EAL LF+ M ++ +PN++T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 441 FVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRST 500
VGVL AC H GL+++G+YY + K GI P EHY C++ LL KAG LD+A K +
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 501 PVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVS 560
+ D V W TLL A RV +N A+ ++ +DP D GTY LLSN+YA ++WD V
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481
Query: 561 KIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVP 620
+IR M+ R +KKEPG SW E+ H FI GD++HP+ ++ +K+ +L ++ +GYVP
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVP 541
Query: 621 DVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLIS 680
+ VL D+E EQ ED L HHSEKLA+A+ LM P I + KNLR+C DCH KL S
Sbjct: 542 ETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLAS 601
Query: 681 KLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
KL R I++RD R+H FQDG CSC DYW
Sbjct: 602 KLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 193/381 (50%), Gaps = 17/381 (4%)
Query: 35 KLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNM 94
+L+K ++ + G +I HL + + L N L+N+Y K N ++ A QLFD M
Sbjct: 66 ELIKCCISNRAVHEGNLICRHLYF---NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 95 RQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEG 154
QRNV+S++++++ Y + L+L M+ DN+ PN Y +S VL SC+ ++
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGM---SDV 178
Query: 155 RQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIEN 214
R H + K GL +VR+AL++++ K + E A + D + D +NS++ G +N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 215 ECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFIN 274
+E+ +M + T + L L+LG+Q H ++K D D+ +N
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILN 296
Query: 275 SAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIR 334
+A++ MY KCG +A +VF ++ R+V+ W+ M++ QN Y +EAL LF M+ +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 335 PNEFTFAVMLNSAAGLSALRHGDLLHAHIEK----SGFKEHLIVGNALINMYAKGGNIEA 390
PN T +L + + L G ++K +EH +I++ K G ++
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY---GCMIDLLGKAGKLDD 413
Query: 391 ANKVFSDMRYR-DIITWNAMI 410
A K+ ++M D +TW ++
Sbjct: 414 AVKLLNEMECEPDAVTWRTLL 434
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 167/350 (47%), Gaps = 18/350 (5%)
Query: 235 DSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVF 294
DS TY S + + G + + + P +F+ + +I+MY K ++A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 295 EGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALR 354
+ + RNV+ WT M++A + + ++AL L M + +RPN +T++ +L S G+S +R
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 355 HGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYS 414
+LH I K G + + V +ALI+++AK G E A VF +M D I WN++I G++
Sbjct: 180 ---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 415 HHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGL 474
+ AL LF+ M A T VL AC L L++ G H++K L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK---YDQDL 293
Query: 475 EHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILH 534
+V + K G L++A + + DV+ W T++ S + QN G+ + +
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMI--SGLAQN-GYSQEALKLFER 349
Query: 535 M-----DPN---DVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPG 576
M PN VG S+ E W ++KL + V++ G
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 299 TRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDL 358
T +L + C+Q + A+ ++ + + T++ ++ A+ G+L
Sbjct: 24 TDQTLLLSEFTRLCYQRD-LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNL 82
Query: 359 LHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGL 418
+ H+ +G + + + N LINMY K + A+++F M R++I+W MI YS +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 419 GREALTLFQNMLAAEERPNHVTFVGVLSACG--------HLGLVQEGF 458
++AL L ML RPN T+ VL +C H G+++EG
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGL 190
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/645 (35%), Positives = 369/645 (57%), Gaps = 7/645 (1%)
Query: 67 NVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV 126
+V + SL++LY++ + AR LFD M R++ S++++++ Y +G E L L +
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 127 SGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDV 186
+ D++ + S+ LS+C+ +G G H Y K GL +V N L++LY + +
Sbjct: 244 AMDSVT----VVSL-LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 187 EMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLS 246
+++ D + D+ +NS++ NE + + +M ++ D +T ++ +
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 247 ASLKDLKLGLQVHSQMLKSD-IEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLW 305
+ L D++ V L+ D+ I +A++ MY K G +A+ VF L +V+ W
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 306 TAMVAACFQNEYFEEALNLFCGMEYEA-IRPNEFTFAVMLNSAAGLSALRHGDLLHAHIE 364
+++ QN + EA+ ++ ME E I N+ T+ +L + + ALR G LH +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 365 KSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALT 424
K+G + V +L +MY K G +E A +F + + + WN +I + HG G +A+
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 538
Query: 425 LFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLL 484
LF+ ML +P+H+TFV +LSAC H GLV EG + + GI P L+HY C+V +
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 485 SKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYI 544
+AG L+ A KF++S ++ D W LL+A RVH N G+ +E++ ++P VG ++
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 658
Query: 545 LLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYE 604
LLSNMYA +W+GV +IR + + ++K PG S E+ N VF +G+ HP ++Y
Sbjct: 659 LLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYR 718
Query: 605 KVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIK 664
++ L AK+K +GYVPD VL DVED++KE L HSE+LAIA+AL+ TP I + K
Sbjct: 719 ELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFK 778
Query: 665 NLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
NLR+C DCHS K ISK+T+R+IIVRD+NRFH F++G CSC DYW
Sbjct: 779 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 255/518 (49%), Gaps = 21/518 (4%)
Query: 4 RKPPTSPQAATRCAPFLFKQNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESS 63
R+ S A C +K ++D L ++ + L+ K +HA L++ S
Sbjct: 32 REFSASANALQDC----WKNGNESKEIDDVHTLFRYCTN---LQSAKCLHARLVV---SK 81
Query: 64 RNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFK 123
+ +NV ++ LVNLY +++AR FD+++ R+V +++ +++ Y G E ++ F
Sbjct: 82 QIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS 141
Query: 124 NMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKC 183
+ L P+ F VL +C +G + H K G ++ YV +L+ LY++
Sbjct: 142 LFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 184 LDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAF 243
V A+ L D +P D+ +N++++G C G + + +G DSVT V+
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGY----CQSGNAKEALTLSNGLRAMDSVTVVSLL 254
Query: 244 GLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVV 303
D G+ +HS +K +E ++F+++ +I +Y + G+ + +KVF+ + R+++
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 304 LWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHI 363
W +++ A NE A++LF M I+P+ T + + + L +R +
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Query: 364 EKSG-FKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREA 422
+ G F E + +GNA++ MYAK G +++A VF+ + D+I+WN +I GY+ +G EA
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 423 LTLFQNM-LAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIV 481
+ ++ M E N T+V VL AC G +++G L+K G+ + T +
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLA 493
Query: 482 GLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVH 519
+ K G L++A P + + V W+TL+ H
Sbjct: 494 DMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 131/254 (51%), Gaps = 12/254 (4%)
Query: 66 ENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNM 125
E++ + N++V +YAK + AR +F+ + +V+S++++++ Y NGF E ++++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 126 VSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLD 185
+ N+ + VL +CS++G +G + HG + K+GL +V +L ++Y KC
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 186 VEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRG----GVEVLGKMVSGSVRWDSVTYVN 241
+E A L +P + +N+ LI F G V + +M+ V+ D +T+V
Sbjct: 502 LEDALSLFYQIPRVNSVPWNT----LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 242 AFGLSASLKDLKLGLQVHSQMLKSD--IEPDVFINSAMISMYGKCGKFSNAKKVFEGLET 299
+ + G Q +M+++D I P + M+ MYG+ G+ A K + +
Sbjct: 558 LLSACSHSGLVDEG-QWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 300 R-NVVLWTAMVAAC 312
+ + +W A+++AC
Sbjct: 617 QPDASIWGALLSAC 630
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 132/265 (49%), Gaps = 10/265 (3%)
Query: 258 VHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEY 317
+H++++ S +V I++ ++++Y G + A+ F+ ++ R+V W M++ +
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 318 FEEALNLFC-GMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGN 376
E + F M + P+ TF +L + + G+ +H K GF + V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAA 189
Query: 377 ALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERP 436
+LI++Y++ + A +F +M RD+ +WNAMI GY G +EALTL + A +
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS-- 247
Query: 437 NHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKF 496
VT V +LSAC G G ++ +K G+ L ++ L ++ G L + +K
Sbjct: 248 --VTVVSLLSACTEAGDFNRGVTIHSYSIKH-GLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 497 MRSTPVKWDVVAWHTLLNASRVHQN 521
V+ D+++W++++ A +++
Sbjct: 305 FDRMYVR-DLISWNSIIKAYELNEQ 328
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 372/650 (57%), Gaps = 24/650 (3%)
Query: 67 NVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV 126
+V L ++ Y + N++ A LFD M R+VVS++S+++ + G + +KLF M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 127 SGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDV 186
E + ++ +++ C RSG+ + + +F V N++V Y + V
Sbjct: 125 -----ERSVVSWTAMVNGCFRSGKVDQAER----LFYQMPVKDTAAWNSMVHGYLQFGKV 175
Query: 187 EMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLS 246
+ A +L +PG +V + +++ GL +NE +++ M+ ++ S +
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 247 ASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWT 306
A+ +G+QVH ++K + ++++++I+ Y C + +++KVF+ V +WT
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 307 AMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKS 366
A+++ N+ E+AL++F GM +I PN+ TFA LNS + L L G +H K
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 367 GFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLF 426
G + VGN+L+ MY+ GN+ A VF + + I++WN++I G + HG G+ A +F
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 427 QNMLAAEERPNHVTFVGVLSACGHLGLVQEG---FYYL----NHLMKQIGIVPGLEHYTC 479
M+ + P+ +TF G+LSAC H G +++G FYY+ NH+ ++I +HYTC
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKI------QHYTC 469
Query: 480 IVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPND 539
+V +L + G L EAE+ + VK + + W LL+A R+H + G + A I ++D
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 540 VGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPES 599
Y+LLSN+YA RW VSK+R MK + K+PGSSW IR H F SGD P
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHC 587
Query: 600 SQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAP 659
S+IYEK+ L K+K LGY PD + LHDVEDEQKE+ L +HSE+LAIA+ L+ T +
Sbjct: 588 SRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSA 647
Query: 660 ILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
+ V+KNLR+C+DCH+ +KLIS + R+I++RD RFH F++G CSC DYW
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 40/212 (18%)
Query: 286 KFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYE-----------AIR 334
+ A++VF + + +V L+T M+ ++ +ALNLF M +
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 335 PNEFTFAVML------NSAAGLSALRHGDLLHAHIEKSGFKEHLI---------VGNALI 379
+ AV L S +A+ +G ++++ E L N+++
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQA---ERLFYQMPVKDTAAWNSMV 166
Query: 380 NMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHV 439
+ Y + G ++ A K+F M +++I+W MICG + EAL LF+NML +
Sbjct: 167 HGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSR 226
Query: 440 TFVGVLSACG-----HLG------LVQEGFYY 460
F V++AC H+G +++ GF Y
Sbjct: 227 PFTCVITACANAPAFHMGIQVHGLIIKLGFLY 258
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/697 (33%), Positives = 375/697 (53%), Gaps = 38/697 (5%)
Query: 51 VIHAHLII--TTESSR------NENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSY 102
++HA+ ++ +T + R N+ N+L+ Y+K IS F+ + R+ V++
Sbjct: 47 IVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTW 106
Query: 103 SSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVF 162
+ L+ Y +G + +K + M+ + +L S +G + G+Q HG V
Sbjct: 107 NVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI 166
Query: 163 KSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGL-----IEN--E 215
K G V + L+ +Y + AK++ L + YNS++ GL IE+ +
Sbjct: 167 KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQ 226
Query: 216 CFRG-----------------------GVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDL 252
FRG +E +M ++ D + + L +
Sbjct: 227 LFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAI 286
Query: 253 KLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAAC 312
G Q+H+ +++++ + +++ SA+I MY KC AK VF+ ++ +NVV WTAMV
Sbjct: 287 NEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGY 346
Query: 313 FQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHL 372
Q EEA+ +F M+ I P+ +T +++ A +S+L G H SG ++
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 373 IVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAA 432
V N+L+ +Y K G+I+ + ++F++M RD ++W AM+ Y+ G E + LF M+
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 433 EERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDE 492
+P+ VT GV+SAC GLV++G Y + + GIVP + HY+C++ L S++G L+E
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 493 AEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAK 552
A +F+ P D + W TLL+A R N G+ AE ++ +DP+ Y LLS++YA
Sbjct: 527 AMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYAS 586
Query: 553 EKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAK 612
+ +WD V+++R+ M+ + VKKEPG SW + + H F + D + P QIY K+ EL+ K
Sbjct: 587 KGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNK 646
Query: 613 IKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDC 672
I GY PD + V HDVE+ K LN+HSE+LAIA+ L+ P PI V KNLR+C DC
Sbjct: 647 IIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDC 706
Query: 673 HSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
H+A K IS +T R+I+VRD RFHRF+DG CSC D+W
Sbjct: 707 HNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 191/415 (46%), Gaps = 34/415 (8%)
Query: 34 LKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDN 93
+ +LK S+ + + LGK IH +I S +++ + L+ +YA IS A+++F
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESY---LLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 94 MRQRNVVSYSSLMTWYLHNGFLLETLKLFKN----------MVSG--------------- 128
+ RN V Y+SLM L G + + L+LF+ M+ G
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 129 ----DNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCL 184
L+ ++Y F VL +C G EG+Q H + ++ YV +AL+++Y KC
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 185 DVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFG 244
+ AK + D + +V + +++ G + V++ M + D T A
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 245 LSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVL 304
A++ L+ G Q H + + S + V ++++++++YGKCG ++ ++F + R+ V
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Query: 305 WTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGD-LLHAHI 363
WTAMV+A Q E + LF M ++P+ T ++++ + + G
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT 499
Query: 364 EKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRY-RDIITWNAMICGYSHHG 417
+ G + + +I+++++ G +E A + + M + D I W ++ + G
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 340 FAVMLNSAAGLSAL---RHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFS 396
++V + GL A R+ ++H +I ++ + N +++ YA + A +VF
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 397 DMRYRDIITWNAMICGYSHHGLGREALTLFQNM 429
+ ++ +WN ++ YS GL E + F+ +
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKL 98
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/747 (33%), Positives = 397/747 (53%), Gaps = 45/747 (6%)
Query: 1 MPARKPPTSPQAATRCAPFLFKQNRAPPSVED-----TLKLLKHSADSKDLKLGKVIHAH 55
M + P T P ++ PF F + + P + +L LL + K L+ ++IHA
Sbjct: 2 MLSCSPLTVPSSSY---PFHFLPSSSDPPYDSIRNHPSLSLLH---NCKTLQSLRIIHAQ 55
Query: 56 LIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFL 115
+I + N + L + A +F +++ N++ ++++ + +
Sbjct: 56 MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 115
Query: 116 LETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNA 175
+ LKL+ M+S L PN Y F VL SC++S EG+Q HG+V K G YV +
Sbjct: 116 VSALKLYVCMISL-GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 176 LVELYT---------KCLD----------------------VEMAKRLLDLLPGYDVFEY 204
L+ +Y K D +E A++L D +P DV +
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 205 NSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLK 264
N++++G E ++ +E+ M+ +VR D T V A ++LG QVH +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 265 SDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNL 324
++ I +A+I +Y KCG+ A +FE L ++V+ W ++ ++EAL L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 325 FCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEK--SGFKEHLIVGNALINMY 382
F M PN+ T +L + A L A+ G +H +I+K G + +LI+MY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 383 AKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFV 442
AK G+IEAA++VF+ + ++ + +WNAMI G++ HG + LF M +P+ +TFV
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 443 GVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPV 502
G+LSAC H G++ G + + + + P LEHY C++ LL +GL EAE+ + +
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM 534
Query: 503 KWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKI 562
+ D V W +LL A ++H N G AE ++ ++P + G+Y+LLSN+YA RW+ V+K
Sbjct: 535 EPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKT 594
Query: 563 RKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDV 622
R L+ + +KK PG S EI + H FI GD HP + +IY + E+ ++ G+VPD
Sbjct: 595 RALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDT 654
Query: 623 AAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKL 682
+ VL ++E+E KE L HHSEKLAIA+ L+ T P + ++KNLR+C +CH A KLISK+
Sbjct: 655 SEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKI 714
Query: 683 TKRDIIVRDTNRFHRFQDGCCSCTDYW 709
KR+II RD RFH F+DG CSC DYW
Sbjct: 715 YKREIIARDRTRFHHFRDGVCSCNDYW 741
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/677 (35%), Positives = 380/677 (56%), Gaps = 10/677 (1%)
Query: 35 KLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNM 94
+LL+ D + + K I AH++ + + + + LV+ KC I ARQ+FD M
Sbjct: 70 QLLRQCIDERSISGIKTIQAHMLKSGFPAE----ISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 95 RQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEG 154
+R++V+++SL+ + + + E +++++ M++ +N+ P+EY S V + S E
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT-NNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 155 RQCHGYVFKSGL-VFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIE 213
++ HG GL V +V +ALV++Y K AK +LD + DV +++ G +
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 214 NECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFI 273
V+ M+ V+ + TY + +LKD+ G +H M+KS E +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 274 NSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAI 333
+++++MY +C ++ +VF+ +E N V WT++++ QN E AL F M ++I
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 334 RPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANK 393
+PN FT + L + L+ G +H + K GF G+ LI++Y K G + A
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARL 424
Query: 394 VFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGL 453
VF + D+I+ N MI Y+ +G GREAL LF+ M+ +PN VT + VL AC + L
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 454 VQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLL 513
V+EG + K I+ +HY C+V LL +AG L+EAE + + + D+V W TLL
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLL 542
Query: 514 NASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKK 573
+A +VH+ RI IL ++P D GT IL+SN+YA +W+ V +++ MK K+KK
Sbjct: 543 SACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 574 EPGSSWTEIRNTTHVFISGD-SNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDE 632
P SW EI TH F++GD +HP S QI E + EL K K LGYV D + V D+E+
Sbjct: 603 NPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEET 662
Query: 633 QKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDT 692
KE L+ HSEKLAIA+A+ I ++KNLR+C DCHS +K++S++ KR+II RD+
Sbjct: 663 AKERSLHQHSEKLAIAFAVWRNVG-GSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDS 721
Query: 693 NRFHRFQDGCCSCTDYW 709
RFH F+DG CSC DYW
Sbjct: 722 KRFHHFRDGSCSCGDYW 738
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 344/614 (56%), Gaps = 36/614 (5%)
Query: 130 NLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTK------- 182
N+ N +F+ + SC+ G+Q H + SG K++ N L+ +Y+K
Sbjct: 39 NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSA 98
Query: 183 ------------------------CLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFR 218
D+ A+++ D +P + +N+++ GLI+ E
Sbjct: 99 VAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNE 158
Query: 219 GGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMI 278
G+ + +M D T + F SA L+ + +G Q+H +K +E D+ +NS++
Sbjct: 159 EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLA 218
Query: 279 SMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEF 338
MY + GK + + V + RN+V W ++ QN E L L+ M+ RPN+
Sbjct: 219 HMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKI 278
Query: 339 TFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDM 398
TF +L+S + L+ G +HA K G + V ++LI+MY+K G + A K FS+
Sbjct: 279 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 338
Query: 399 RYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEE---RPNHVTFVGVLSACGHLGLVQ 455
D + W++MI Y HG G EA+ LF M AE+ N V F+ +L AC H GL
Sbjct: 339 EDEDEVMWSSMISAYGFHGQGDEAIELFNTM--AEQTNMEINEVAFLNLLYACSHSGLKD 396
Query: 456 EGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNA 515
+G + ++++ G PGL+HYTC+V LL +AG LD+AE +RS P+K D+V W TLL+A
Sbjct: 397 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
Query: 516 SRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEP 575
+H+N +R+ + IL +DPND Y+LL+N++A KRW VS++RK M+ + VKKE
Sbjct: 457 CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 516
Query: 576 GSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKE 635
G SW E + H F GD + +S +IY ++EL+ ++K GY PD A+VLHD+++E+KE
Sbjct: 517 GISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKE 576
Query: 636 DYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRF 695
L HSEKLA+A+ALM P API +IKNLR+C DCH A K IS + R+I +RD +RF
Sbjct: 577 SDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRF 636
Query: 696 HRFQDGCCSCTDYW 709
H F +G CSC DYW
Sbjct: 637 HHFINGKCSCGDYW 650
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 180/377 (47%), Gaps = 6/377 (1%)
Query: 64 RNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFK 123
R +N + +N L+N Y + + AR++FD M R + ++++++ + F E L LF+
Sbjct: 106 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 165
Query: 124 NMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKC 183
M G P+EY V S + + G+Q HGY K GL V ++L +Y +
Sbjct: 166 EM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 224
Query: 184 LDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAF 243
++ + ++ +P ++ +N+++ G +N C + + M R + +T+V
Sbjct: 225 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 284
Query: 244 GLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVV 303
+ L G Q+H++ +K V + S++ISMY KCG +A K F E + V
Sbjct: 285 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV 344
Query: 304 LWTAMVAACFQNEYFEEALNLFCGM-EYEAIRPNEFTFAVMLNSAAGLSALRHG-DLLHA 361
+W++M++A + +EA+ LF M E + NE F +L + + G +L
Sbjct: 345 MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDM 404
Query: 362 HIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYR-DIITWNAMICGYSHHGLGR 420
+EK GFK L ++++ + G ++ A + M + DI+ W ++ + H
Sbjct: 405 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAE 464
Query: 421 EALTLFQNMLAAEERPN 437
A +F+ +L + PN
Sbjct: 465 MAQRVFKEILQID--PN 479
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/671 (33%), Positives = 377/671 (56%), Gaps = 16/671 (2%)
Query: 49 GKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTW 108
G +H +L+ +S N++ +N L+++Y KC + +A ++FD+M +RNVVS+S+LM+
Sbjct: 25 GGQVHCYLL---KSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSG 81
Query: 109 YLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVF 168
++ NG L +L LF M + PNE+ FS L +C +G Q HG+ K G
Sbjct: 82 HVLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM 140
Query: 169 CKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMV 228
V N+LV++Y+KC + A+++ + + +N+++ G + ++ G M
Sbjct: 141 MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 229 SGSV--RWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIE--PDVFINSAMISMYGKC 284
++ R D T + +S + G Q+H +++S I +++ +Y KC
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 285 GKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVML 344
G +A+K F+ ++ + ++ W++++ Q F EA+ LF ++ + + F + ++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 345 NSAAGLSALRHGDLLHAHIEK--SGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRD 402
A + LR G + A K SG + ++ N++++MY K G ++ A K F++M+ +D
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKD 378
Query: 403 IITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLN 462
+I+W +I GY HGLG++++ +F ML P+ V ++ VLSAC H G+++EG +
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 463 HLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNY 522
L++ GI P +EHY C+V LL +AG L EA+ + + P+K +V W TLL+ RVH +
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDI 498
Query: 523 GFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEI 582
G+ + + +L +D + Y+++SN+Y + W+ R+L ++ +KKE G SW EI
Sbjct: 499 ELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 558
Query: 583 RNTTHVFISGDSNHPESSQIYEKVRELSAKIK-PLGYVPDVAAVLHDVEDEQKEDYLNHH 641
H F SG+ +HP + I E ++E +++ LGYV + LHD++DE KE+ L H
Sbjct: 559 EREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAH 618
Query: 642 SEKLAIAYALME---TPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRF 698
SEKLAI AL I V KNLR+C DCH +K +SK+TK +VRD RFH F
Sbjct: 619 SEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSF 678
Query: 699 QDGCCSCTDYW 709
+DGCCSC DYW
Sbjct: 679 EDGCCSCGDYW 689
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 214/443 (48%), Gaps = 18/443 (4%)
Query: 141 VLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYD 200
+L C+R G +G Q H Y+ KSG N L+++Y KC + MA ++ D +P +
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 201 VFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHS 260
V ++++++G + N +G + + +M + + T+ L L+ GLQ+H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 261 QMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEE 320
LK E V + ++++ MY KCG+ + A+KVF + R+++ W AM+A Y +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 321 ALNLFCGMEYEAI--RPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGF--KEHLIVGN 376
AL+ F M+ I RP+EFT +L + + + G +H + +SGF +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 377 ALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERP 436
+L+++Y K G + +A K F ++ + +I+W+++I GY+ G EA+ LF+ + +
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 437 NHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEH--YTCIVGLLSKAGLLDEAE 494
+ ++ L+++G +K + GLE +V + K GL+DEAE
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVK---LPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 495 KFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHM-----DPNDVGTYILLSNM 549
K +K DV++W ++ + +G G++ M +P++V +LS
Sbjct: 369 KCFAEMQLK-DVISWTVVITG---YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 550 YAKEKRWDGVSKIRKLMKVRKVK 572
+G KL++ +K
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIK 447
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/648 (35%), Positives = 367/648 (56%), Gaps = 21/648 (3%)
Query: 65 NENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKN 124
+ N++ N LV+ Y K +I AR++FD M +RNVVS+++L+ Y+HNG + LF
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 125 MVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCL 184
M E N+ ++++L + GR + + + + + R +++ K
Sbjct: 136 MP-----EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNI----ARTSMIHGLCKEG 186
Query: 185 DVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGS-VRWDSVTYVNAF 243
V+ A+ + D + V + +++ G +N ++ M + V W S+ + +
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM--LMGY 244
Query: 244 GLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVV 303
+ ++D + +V ++P + N AMIS G+ G+ + A++VF+ ++ RN
Sbjct: 245 VQNGRIEDAEELFEVMP------VKPVIACN-AMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 304 LWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHI 363
W ++ +N + EAL+LF M+ + +RP T +L+ A L++L HG +HA +
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 364 EKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREAL 423
+ F + V + L+ MY K G + + +F +DII WN++I GY+ HGLG EAL
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 424 TLFQNM-LAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVG 482
+F M L+ +PN VTFV LSAC + G+V+EG + G+ P HY C+V
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 483 LLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGT 542
+L +AG +EA + + S V+ D W +LL A R H A+ ++ ++P + GT
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGT 537
Query: 543 YILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSN-HPESSQ 601
YILLSNMYA + RW V+++RKLMK R V+K PG SWTE+ N H F G N HPE
Sbjct: 538 YILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQES 597
Query: 602 IYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPIL 661
I + + EL ++ GY PD + LHDV++E+K + L +HSE+LA+AYAL++ PI
Sbjct: 598 ILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIR 657
Query: 662 VIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
V+KNLR+C DCH+A+K+ISK+ +R+II+RD NRFH F++G CSC DYW
Sbjct: 658 VMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 62/299 (20%)
Query: 278 ISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNE 337
I+ + GK A+K+F+ +++++ W +MVA F N +A LF M P+
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD- 76
Query: 338 FTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSD 397
++I N L++ Y K G I+ A KVF
Sbjct: 77 --------------------------------RNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 398 MRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEG 457
M R++++W A++ GY H+G A +LF M N V++ +L +G +Q+G
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVML-----IGFLQDG 155
Query: 458 FYYLNHLMKQIGIVPGLEHY--TCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNA 515
++ K ++P ++ T ++ L K G +DEA + + V+ W T++
Sbjct: 156 --RIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER-SVITWTTMVTG 212
Query: 516 SRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNM---YAKEKRWDGVSKIRKLMKVRKV 571
YG R+ + D T + ++M Y + R + ++ ++M V+ V
Sbjct: 213 ------YGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 374 VGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAE 433
N I ++ G I A K+F + I +WN+M+ GY + + R+A LF M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 434 ERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEA 493
N +++ G++S G + E + LM + +V +T +V G +D A
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFD-LMPERNVV----SWTALVKGYVHNGKVDVA 129
Query: 494 EKFMRSTPVKWDVVAWHTLL 513
E P K + V+W +L
Sbjct: 130 ESLFWKMPEK-NKVSWTVML 148
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/702 (33%), Positives = 383/702 (54%), Gaps = 33/702 (4%)
Query: 40 SADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNV 99
SA +K G I H +I + +++ + NSLV+ YA+C ++ AR++FD M +RNV
Sbjct: 142 SACAKSRAKGNGIQIHGLIV-KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 100 VSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHG 159
VS++S++ Y F + + LF MV + + PN V+S+C++ G + +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 160 YVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRG 219
++ SG+ + +ALV++Y KC +++AKRL D ++ N++ + + R
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 220 GVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMIS 279
+ V M+ VR D ++ ++A + L+++ G H +L++ E I +A+I
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 280 MYGKC-------------------------------GKFSNAKKVFEGLETRNVVLWTAM 308
MY KC G+ A + FE + +N+V W +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 309 VAACFQNEYFEEALNLFCGME-YEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSG 367
++ Q FEEA+ +FC M+ E + + T + ++ L AL ++ +IEK+G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 368 FKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQ 427
+ + +G L++M+++ G+ E+A +F+ + RD+ W A I + G A+ LF
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 428 NMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKA 487
+M+ +P+ V FVG L+AC H GLVQ+G ++K G+ P HY C+V LL +A
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 488 GLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLS 547
GLL+EA + + P++ + V W++LL A RV N AE I + P G+Y+LLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 548 NMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVR 607
N+YA RW+ ++K+R MK + ++K PG+S +IR TH F SGD +HPE I +
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 608 ELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLR 667
E+S + LG+VPD++ VL DV++++K L+ HSEKLA+AY L+ + I ++KNLR
Sbjct: 741 EVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLR 800
Query: 668 MCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
+C DCHS K SK+ R+II+RD NRFH + G CSC D+W
Sbjct: 801 VCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 249/543 (45%), Gaps = 55/543 (10%)
Query: 7 PTSPQAATRCAPFLFKQNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNE 66
P T P L Q++ + +LK + K + K+ H L T+ +
Sbjct: 12 PMVLATTTTTKPSLLNQSKCTKATPSSLK------NCKTIDELKMFHRSL---TKQGLDN 62
Query: 67 NVVLTNSLVNLYAKCN---QISIARQLFDNMRQRNVV-SYSSLMTWYLHNGFLLETLKLF 122
+V LV + +S A+++F+N Y+SL+ Y +G E + LF
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 123 KNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTK 182
M++ + P++Y F LS+C++S G Q HG + K G +V+N+LV Y +
Sbjct: 123 LRMMNS-GISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 183 CLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGS-VRWDSVTYVN 241
C +++ A+++ D + +V + S++ G + + V++ +MV V +SVT V
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 242 AFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRN 301
A L+DL+ G +V++ + S IE + + SA++ MY KC AK++F+ N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 302 VVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHA 361
+ L AM + + EAL +F M +RP+ + ++S + L + G H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 362 HIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHG---- 417
++ ++GF+ + NALI+MY K + A ++F M + ++TWN+++ GY +G
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 418 ---------------------------LGREALTLFQNMLAAEE-RPNHVTFVGVLSACG 449
L EA+ +F +M + E + VT + + SACG
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 450 HLG---LVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDV 506
HLG L + +YY+ Q+ + G T +V + S+ G + A S + DV
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLG----TTLVDMFSRCGDPESAMSIFNSLTNR-DV 536
Query: 507 VAW 509
AW
Sbjct: 537 SAW 539
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/684 (32%), Positives = 381/684 (55%), Gaps = 5/684 (0%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIA 87
P V + +L A +++ LGK +H + + ++ +VL N+L+++Y+KC I+ A
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAV---KLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 88 RQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSG-DNLEPNEYIFSIVLSSCS 146
+ +F +NVVS+++++ + G T + + M++G ++++ +E + C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 147 RSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNS 206
++ H Y K V+ + V NA V Y KC + A+R+ + V +N+
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 207 VLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSD 266
++ G ++ R ++ +M + DS T + + LK L+LG +VH ++++
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 267 IEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFC 326
+E D+F+ +++S+Y CG+ + +F+ +E +++V W ++ QN + + AL +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 327 GMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGG 386
M I+ + + + + L +LR G HA+ K ++ + +LI+MYAK G
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 387 NIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLS 446
+I ++KVF+ ++ + +WNAMI GY HGL +EA+ LF+ M P+ +TF+GVL+
Sbjct: 647 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 706
Query: 447 ACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFM-RSTPVKWD 505
AC H GL+ EG YL+ + G+ P L+HY C++ +L +AG LD+A + + + D
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766
Query: 506 VVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKL 565
V W +LL++ R+HQN G ++A + ++P Y+LLSN+YA +W+ V K+R+
Sbjct: 767 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQR 826
Query: 566 MKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAV 625
M ++K+ G SW E+ F+ G+ +I L KI +GY PD +V
Sbjct: 827 MNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV 886
Query: 626 LHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKR 685
HD+ +E+K + L HSEKLA+ Y L++T I V KNLR+C DCH+A KLISK+ +R
Sbjct: 887 QHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMER 946
Query: 686 DIIVRDTNRFHRFQDGCCSCTDYW 709
+I+VRD RFH F++G CSC DYW
Sbjct: 947 EIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 237/494 (47%), Gaps = 26/494 (5%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
LL+ S KD+++G+ IH L+ + RN++V+ T ++ +YA C +R +FD +R
Sbjct: 90 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTR-IITMYAMCGSPDDSRFVFDALR 147
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
+N+ ++++++ Y N E L+ F M+S +L P+ + + V+ +C+ G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE 215
HG V K+GLV +V NALV Y V A +L D++P ++ +NS++ +N
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 216 CFRGGVEVLGKMV----SGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDV 271
+LG+M+ G+ D T V + A +++ LG VH +K ++ ++
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 272 FINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNE-----YFEEALNLFC 326
+N+A++ MY KCG +NA+ +F+ +NVV W MV F E F+ +
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG-FSAEGDTHGTFDVLRQMLA 386
Query: 327 GMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGG 386
G E ++ +E T + S L LH + K F + +V NA + YAK G
Sbjct: 387 G--GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 387 NIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLS 446
++ A +VF +R + + +WNA+I G++ R +L M + P+ T +LS
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 447 ACG-----HLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTP 501
AC LG GF N L + + + Y ++ L G L + +
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFV------YLSVLSLYIHCGELCTVQALFDAME 558
Query: 502 VKWDVVAWHTLLNA 515
K +V+W+T++
Sbjct: 559 DK-SLVSWNTVITG 571
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/574 (36%), Positives = 333/574 (58%), Gaps = 2/574 (0%)
Query: 138 FSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLP 197
+ +L++C +G++ H ++ K+ + Y+R L+ Y KC +E A+++LD +P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 198 GYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQ 257
+V + ++++ + + V +M+ + + T+ L LG Q
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 258 VHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEY 317
+H ++K + + +F+ S+++ MY K G+ A+++FE L R+VV TA++A Q
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 318 FEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNA 377
EEAL +F + E + PN T+A +L + +GL+ L HG H H+ + + ++ N+
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 378 LINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEE-RP 436
LI+MY+K GN+ A ++F +M R I+WNAM+ GYS HGLGRE L LF+ M + +P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 437 NHVTFVGVLSACGHLGLVQEGFYYLNHLMK-QIGIVPGLEHYTCIVGLLSKAGLLDEAEK 495
+ VT + VLS C H + G + ++ + G PG EHY CIV +L +AG +DEA +
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 496 FMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKR 555
F++ P K +LL A RVH + G + ++ ++P + G Y++LSN+YA R
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 556 WDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKP 615
W V+ +R +M + V KEPG SW + T H F + D HP ++ K++E+S K+K
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 616 LGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSA 675
GYVPD++ VL+DV++EQKE L HSEKLA+ + L+ T PI V KNLR+C DCH+
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 676 VKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
K+ SK+ +R++ +RD NRFH+ DG CSC DYW
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 180/377 (47%), Gaps = 29/377 (7%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
LL D + L+ G+ +HAH+I T L L+ Y KC+ + AR++ D M
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLP---ATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
++NVVS++++++ Y G E L +F M+ D +PNE+ F+ VL+SC R+ G+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGK 173
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE 215
Q HG + K +V ++L+++Y K ++ A+ + + LP DV +++ G +
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 216 CFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINS 275
+E+ ++ S + + VTY + + L L G Q H +L+ ++ + +
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 276 AMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEA-IR 334
++I MY KCG S A+++F+ + R + W AM+ ++ E L LF M E ++
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 335 PNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFK--EHLIVG-----------NALINM 381
P+ T +L+ + H +E +G + ++ G +++M
Sbjct: 354 PDAVTLLAVLSGCS-----------HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402
Query: 382 YAKGGNIEAANKVFSDM 398
+ G I+ A + M
Sbjct: 403 LGRAGRIDEAFEFIKRM 419
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/512 (38%), Positives = 323/512 (63%), Gaps = 2/512 (0%)
Query: 200 DVFEYNSVLNGLIENECFRGGVEVLGKM-VSGSVRWDSVTYVNAFGLSASLKDLKLGLQV 258
+VF +N+++ G E + +M VSG V D+ TY ++ D++LG +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 259 HSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYF 318
HS +++S +++ ++++ +Y CG ++A KVF+ + +++V W +++ +N
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 319 EEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNAL 378
EEAL L+ M + I+P+ FT +L++ A + AL G +H ++ K G +L N L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 379 INMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEER-PN 437
+++YA+ G +E A +F +M ++ ++W ++I G + +G G+EA+ LF+ M + E P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 438 HVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFM 497
+TFVG+L AC H G+V+EGF Y + ++ I P +EH+ C+V LL++AG + +A +++
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 498 RSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWD 557
+S P++ +VV W TLL A VH + IL ++PN G Y+LLSNMYA E+RW
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 558 GVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLG 617
V KIRK M VKK PG S E+ N H F+ GD +HP+S IY K++E++ +++ G
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 618 YVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVK 677
YVP ++ V DVE+E+KE+ + +HSEK+AIA+ L+ TP +PI V+KNLR+C DCH A+K
Sbjct: 504 YVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIK 563
Query: 678 LISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
L+SK+ R+I+VRD +RFH F++G CSC DYW
Sbjct: 564 LVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 201/419 (47%), Gaps = 14/419 (3%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHA----HLIITTESSRNENVVLTNSLVNLYAKCNQ 83
P VE + LL+ S KL + IHA H + +++ ++++ LV+L +
Sbjct: 13 PMVEKCINLLQTYGVSSITKL-RQIHAFSIRHGVSISDAELGKHLIFY--LVSLPSP-PP 68
Query: 84 ISIARQLFDNMRQR-NVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVL 142
+S A ++F + + NV +++L+ Y G + L++ M +EP+ + + ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 143 SSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVF 202
+ + G H V +SG YV+N+L+ LY C DV A ++ D +P D+
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 203 EYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQM 262
+NSV+NG EN + + +M S ++ D T V+ A + L LG +VH M
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 263 LKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEAL 322
+K + ++ ++ ++ +Y +CG+ AK +F+ + +N V WT+++ N + +EA+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 323 NLFCGME-YEAIRPNEFTFAVMLNSAAGLSALRHG-DLLHAHIEKSGFKEHLIVGNALIN 380
LF ME E + P E TF +L + + ++ G + E+ + + +++
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 381 MYAKGGNIEAANKVFSDMRYR-DIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNH 438
+ A+ G ++ A + M + +++ W ++ + H G L F + + PNH
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNH 425
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/730 (30%), Positives = 370/730 (50%), Gaps = 72/730 (9%)
Query: 50 KVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWY 109
K AH I ++N+ + + L+ Y+ N + A + ++ + S+SSL+
Sbjct: 33 KTTQAHARILKSGAQNDGYI-SAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 110 LHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFC 169
+++ +F M S L P+ ++ + C+ G+Q H SGL
Sbjct: 92 TKAKLFTQSIGVFSRMFS-HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 170 KYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVS 229
+V+ ++ +Y +C + A+++ D + DV +++L C V +L +M S
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 230 GSVRWDSVTY---VNAFGLSASLKD--------------------------------LKL 254
+ + V++ ++ F S K+ L +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 255 GLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETR-------------- 300
G +H ++K + D + SAMI MYGK G +F E
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 301 ---------------------NVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFT 339
NVV WT+++A C QN EAL LF M+ ++PN T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 340 FAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMR 399
ML + ++AL HG H + +++ VG+ALI+MYAK G I + VF+ M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 400 YRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFY 459
++++ WN+++ G+S HG +E +++F++++ +P+ ++F +LSACG +GL EG+
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 460 YLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVH 519
Y + ++ GI P LEHY+C+V LL +AG L EA ++ P + D W LLN+ R+
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 520 QNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSW 579
N AE + H++P + GTY+LLSN+YA + W V IR M+ +KK PG SW
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 580 TEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLN 639
+++N + ++GD +HP+ QI EK+ E+S +++ G+ P++ LHDVE++++E L
Sbjct: 631 IQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLW 690
Query: 640 HHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQ 699
HSEKLA+ + L+ TP P+ VIKNLR+C DCH+ +K IS R+I +RDTNRFH F+
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFK 750
Query: 700 DGCCSCTDYW 709
DG CSC D+W
Sbjct: 751 DGICSCGDFW 760
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 188/447 (42%), Gaps = 76/447 (17%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
L K A+ K+GK IH ++ S + + + S+ ++Y +C ++ AR++FD M
Sbjct: 122 LFKVCAELSAFKVGKQIHC---VSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS 178
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAE-- 153
++VV+ S+L+ Y G L E +++ M S +E N ++ +LS +RSG E
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMES-SGIEANIVSWNGILSGFNRSGYHKEAV 237
Query: 154 ---------------------------------GRQCHGYVFKSGLVFCKYVRNALVELY 180
GR HGYV K GL+ K V +A++++Y
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 181 TKCLDV-----------------------------------EMAKRLLDLLPGYDVFEYN 205
K V EM + + +V +
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 206 SVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKS 265
S++ G +N +E+ +M V+ + VT + ++ L G H ++
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 266 DIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLF 325
+ +V + SA+I MY KCG+ + ++ VF + T+N+V W +++ + +E +++F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 326 CGMEYEAIRPNEFTFAVMLNSAAGLSALRHG-DLLHAHIEKSGFKEHLIVGNALINMYAK 384
+ ++P+ +F +L++ + G E+ G K L + ++N+ +
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR 537
Query: 385 GGNIEAANKVFSDMRYR-DIITWNAMI 410
G ++ A + +M + D W A++
Sbjct: 538 AGKLQEAYDLIKEMPFEPDSCVWGALL 564
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/624 (34%), Positives = 352/624 (56%), Gaps = 34/624 (5%)
Query: 120 KLFKNMVS--GDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALV 177
KL + V G +P + ++ CS++ EG++ H ++ SG V + N L+
Sbjct: 68 KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 178 ELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKM---------- 227
+Y KC + A+++ D +P D+ +N ++NG E ++ +M
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 228 -VSGSVRWDS-----VTYV----------NAFGLS------ASLKDLKLGLQVHSQMLKS 265
V+G V+ D V Y N F +S A++K ++ G ++H ++++
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 266 DIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLF 325
++ D + S+++ MYGKCG A+ +F+ + ++VV WT+M+ F++ + E +LF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 326 CGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKG 385
+ RPNE+TFA +LN+ A L+ G +H ++ + GF + ++L++MY K
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 386 GNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVL 445
GNIE+A V D+++W ++I G + +G EAL F +L + +P+HVTFV VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 446 SACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWD 505
SAC H GLV++G + + ++ + +HYTC+V LL+++G ++ + + P+K
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 506 VVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKL 565
W ++L + N A+ + ++P + TY+ ++N+YA +W+ K+RK
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKR 547
Query: 566 MKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAV 625
M+ V K PGSSWTEI+ HVFI+ D++HP +QI E +REL K+K GYVP + V
Sbjct: 548 MQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLV 607
Query: 626 LHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKR 685
LHDVEDEQKE+ L +HSEKLA+A+A++ T I V KNLR C DCH A+K IS +TKR
Sbjct: 608 LHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKR 667
Query: 686 DIIVRDTNRFHRFQDGCCSCTDYW 709
I VRD+ RFH F++G CSC DYW
Sbjct: 668 KITVRDSTRFHCFENGQCSCGDYW 691
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 229/502 (45%), Gaps = 49/502 (9%)
Query: 11 QAATRCAPFLFKQNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVL 70
Q R A L + + PP+ L++ + ++ L+ GK +H H+ S +V+
Sbjct: 67 QKLLREAVQLLGRAKKPPA-STYCNLIQVCSQTRALEEGKKVHEHI---RTSGFVPGIVI 122
Query: 71 TNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGD- 129
N L+ +YAKC + AR++FD M R++ S++ ++ Y G L E KLF M D
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 130 ------------------------------NLEPNEYIFSIVLSSCSRSGRGAEGRQCHG 159
N PN + SI +++ + G++ HG
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 160 YVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRG 219
++ ++GL + + ++L+++Y KC ++ A+ + D + DV + S+++ ++ +R
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 220 GVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMIS 279
G + ++V R + T+ A L +LG QVH M + +P F +S+++
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 280 MYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFT 339
MY KCG +AK V +G ++V WT+++ C QN +EAL F + +P+ T
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 340 FAVMLNSAAGLSALRHG-DLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDM 398
F +L++ + G + ++ EK L+++ A+ G E V S+M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 399 RYR-DIITWNAMICGYSHHG---LGREALT-LFQNMLAAEERPNHVTFVGVLSACGHLGL 453
+ W +++ G S +G L EA LF+ + E +VT + +A G
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWE- 539
Query: 454 VQEGFYYLNHLMKQIGIV--PG 473
+EG + M++IG+ PG
Sbjct: 540 -EEG--KMRKRMQEIGVTKRPG 558
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 169/344 (49%), Gaps = 38/344 (11%)
Query: 204 YNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQML 263
+ ++ L + R V++LG+ + + + TY N + + + L+ G +VH +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGR----AKKPPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 264 KSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETR-----NVVL-------------- 304
S P + I + ++ MY KCG +A+KVF+ + R NV++
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARK 172
Query: 305 ------------WTAMVAACFQNEYFEEALNLFCGME-YEAIRPNEFTFAVMLNSAAGLS 351
WTAMV + + EEAL L+ M+ RPN FT ++ + +AA +
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 352 ALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMIC 411
+R G +H HI ++G ++ ++L++MY K G I+ A +F + +D+++W +MI
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 412 GYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIV 471
Y RE +LF ++ + ERPN TF GVL+AC L + G ++ M ++G
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELG-KQVHGYMTRVGFD 351
Query: 472 PGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNA 515
P + +V + +K G ++ A+ + P K D+V+W +L+
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGG 394
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/678 (32%), Positives = 372/678 (54%), Gaps = 18/678 (2%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
L + + + L G+++H + + E N +V+L N ++ +Y +C + A +LFD M
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIE---NPSVLLQNCVLQMYCECRSLEDADKLFDEMS 145
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMV-SGDNLEPNEYIFSIVLSSCSRSGRGAEG 154
+ N VS +++++ Y G L + + LF M+ SGD +P +++ +L S G
Sbjct: 146 ELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD--KPPSSMYTTLLKSLVNPRALDFG 203
Query: 155 RQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIEN 214
RQ H +V ++GL + +V +Y KC + AKR+ D + ++ G +
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 215 ECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFIN 274
R +++ +V+ V WDS + ASL++L LG Q+H+ + K +E +V +
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 275 SAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYE-AI 333
+ ++ Y KC F +A + F+ + N V W+A+++ Q FEEA+ F + + A
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 334 RPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANK 393
N FT+ + + + L+ G +HA K +ALI MY+K G ++ AN+
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 394 VFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGL 453
VF M DI+ W A I G++++G EAL LF+ M++ +PN VTF+ VL+AC H GL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 454 VQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLL 513
V++G + L+ ++++ + P ++HY C++ + +++GLLDEA KFM++ P + D ++W L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 514 NASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKK 573
+ H+N G E + +DP D Y+L N+Y +W+ +++ KLM R +KK
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 574 EPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQ 633
E SW + + H FI GD +HP++ +IYEK++E ++ + ++ E+
Sbjct: 624 ELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMT--------ER 675
Query: 634 KEDYLNHHSEKLAIAYALMET--PPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRD 691
+E L+ HSE+LAIA+ L+ API V KNLR C DCH K +S +T +I++RD
Sbjct: 676 REQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRD 734
Query: 692 TNRFHRFQDGCCSCTDYW 709
+ RFH F++G CSC DYW
Sbjct: 735 SRRFHHFKEGKCSCNDYW 752
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 214 NECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFI 273
NE F E L +M V S +Y F L+ L G +H +M P V +
Sbjct: 65 NEAF----EFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 274 NSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAI 333
+ ++ MY +C +A K+F+ + N V T M++A + ++A+ LF GM
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 334 RPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANK 393
+P + +L S AL G +HAH+ ++G + + ++NMY K G + A +
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 394 VFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHL 451
VF M + + ++ GY+ G R+AL LF +++ + F VL AC L
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/692 (35%), Positives = 391/692 (56%), Gaps = 29/692 (4%)
Query: 36 LLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMR 95
L + A+ ++L G +H H++ + ++NV+L N L+N+YAKC I ARQ+FD M
Sbjct: 65 LFQACAEQRNLLDGINLHHHML-SHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
+RNVVS+++L+T Y+ G E LF +M+S + PNE+ S VL+SC R G+
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSMLS--HCFPNEFTLSSVLTSC----RYEPGK 177
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKR---LLDLLPGYDVFEYNSVLNGLI 212
Q HG K GL YV NA++ +Y +C D A + + + ++ +NS++
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQ 237
Query: 213 ENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDL------KLGLQVHSQMLKSD 266
+ + V +M S V +D T +N DL K LQ+HS +KS
Sbjct: 238 CCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSG 297
Query: 267 IEPDVFINSAMISMYGK-CGKFSNAKKVF-EGLETRNVVLWTAMVAACFQNEYFEEALNL 324
+ + +A+I +Y + +++ K+F E R++V W ++ A F E A++L
Sbjct: 298 LVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA-FAVYDPERAIHL 356
Query: 325 FCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAK 384
F + E + P+ +TF+ +L + AGL RH +HA + K GF ++ N+LI+ YAK
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAK 416
Query: 385 GGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGV 444
G+++ +VF DM RD+++WN+M+ YS HG L +FQ M + P+ TF+ +
Sbjct: 417 CGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIAL 473
Query: 445 LSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKW 504
LSAC H G V+EG + ++ +P L HY C++ +LS+A EAE+ ++ P+
Sbjct: 474 LSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDP 533
Query: 505 DVVAWHTLLNASRVHQNYGFGRRIAEYILHM-DPNDVGTYILLSNMYAKEKRWDGVSKIR 563
D V W LL + R H N G+ A+ + + +P + +YI +SN+Y E ++ +
Sbjct: 534 DAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSI 593
Query: 564 KLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDV- 622
K M+ +V+KEP SWTEI N H F SG + P+ +Y +++ L + +K +GYVP++
Sbjct: 594 KEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMR 653
Query: 623 AAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAP-----ILVIKNLRMCDDCHSAVK 677
+A ++EQ+ED L HHSEKLA+A+A+ME ++ I ++KN R+C DCH+ +K
Sbjct: 654 SASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMK 713
Query: 678 LISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
L SKL ++I++RD+NRFH F+D CSC DYW
Sbjct: 714 LASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/650 (34%), Positives = 364/650 (56%), Gaps = 30/650 (4%)
Query: 67 NVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV 126
NVV N LV+ Y K I AR +F+ M +RNVVS+++++ Y+ G + E LF M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 127 SGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLD- 185
E NE ++++ GR + R+ + + +V + L C +
Sbjct: 138 -----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL------CREG 186
Query: 186 -VEMAKRLLDLLPGYDVFEYNSVLNGLIEN---ECFRGGVEVLGKMVSGSVRWDSVTYVN 241
V+ A+ + D + +V + +++ G +N + R EV+ + V W S+
Sbjct: 187 RVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE--VSWTSMLL-- 242
Query: 242 AFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRN 301
+ LS ++D + +V ++P + N AMI +G+ G+ S A++VF+ +E R+
Sbjct: 243 GYTLSGRIEDAEEFFEVMP------MKPVIACN-AMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 302 VVLWTAMVAACFQNEYFE-EALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLH 360
W M+ A ++ + FE EAL+LF M+ + +RP+ + +L+ A L++L++G +H
Sbjct: 296 NATWRGMIKA-YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 361 AHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGR 420
AH+ + F + + V + L+ MY K G + A VF +DII WN++I GY+ HGLG
Sbjct: 355 AHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGE 414
Query: 421 EALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCI 480
EAL +F M ++ PN VT + +L+AC + G ++EG + + + P +EHY+C
Sbjct: 415 EALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCT 474
Query: 481 VGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDV 540
V +L +AG +D+A + + S +K D W LL A + H A+ + +P++
Sbjct: 475 VDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNA 534
Query: 541 GTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGD-SNHPES 599
GTY+LLS++ A +W V+ +RK M+ V K PG SW E+ H+F G NHPE
Sbjct: 535 GTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQ 594
Query: 600 SQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAP 659
+ I + + ++ GY PD + VLHDV++E+K D L+ HSE+LA+AY L++ P P
Sbjct: 595 AMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVP 654
Query: 660 ILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
I V+KNLR+C DCH+A+KLISK+T+R+II+RD NRFH F +G CSC DYW
Sbjct: 655 IRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIA 87
PS + +L A L+ G+ +HAHL+ +++V + + L+ +Y KC ++ A
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLV---RCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 88 RQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSR 147
+ +FD ++++ ++S+++ Y +G E LK+F M S + PN+ +L++CS
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM-PNKVTLIAILTACSY 444
Query: 148 SGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDV 186
+G+ EG + +F+S + K+ VE Y+ +D+
Sbjct: 445 AGKLEEGLE----IFES--MESKFCVTPTVEHYSCTVDM 477
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 278 ISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNE 337
IS + GK + A+K F+ L+ + + W ++V+ F N +EA LF M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-------- 75
Query: 338 FTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSD 397
+ +++ N L++ Y K I A VF
Sbjct: 76 -------------------------------ERNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 398 MRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEG 457
M R++++W AM+ GY G+ EA +LF M ER N V++ + GL+ +G
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRM---PER-NEVSWTVMFG-----GLIDDG 155
Query: 458 FYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASR 517
+ + V + T ++G L + G +DEA + + + +VV W T++ R
Sbjct: 156 RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEA-RLIFDEMRERNVVTWTTMITGYR 214
Query: 518 VHQNYGFGRRIAEYI 532
+ R++ E +
Sbjct: 215 QNNRVDVARKLFEVM 229
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/634 (35%), Positives = 354/634 (55%), Gaps = 71/634 (11%)
Query: 50 KVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWY 109
+ +HA +I +S + + + N L++ Y+KC + RQ+FD M QRN+ +++S++T
Sbjct: 40 RYVHASVI---KSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 110 LHNGFLLETLKLFKNM-----------VSG----DNLEP---------------NEYIFS 139
GFL E LF++M VSG D E NEY F+
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 140 IVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGY 199
VLS+CS +G Q H + KS + Y+ +ALV++Y+KC +V A+R+ D +
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 200 DVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVH 259
+V +NS++ +N ++V M+ V D VT + ASL +K+G +VH
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 260 SQMLKSD-IEPDVFINSAMISMYGKCGKFSNAKKVFEGL-------ET------------ 299
+++K+D + D+ +++A + MY KC + A+ +F+ + ET
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 300 ------------RNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSA 347
RNVV W A++A QN EEAL+LFC ++ E++ P ++FA +L +
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 348 AGLSALRHGDLLHAHIEKSGFK------EHLIVGNALINMYAKGGNIEAANKVFSDMRYR 401
A L+ L G H H+ K GFK + + VGN+LI+MY K G +E VF M R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 402 DIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYL 461
D ++WNAMI G++ +G G EAL LF+ ML + E+P+H+T +GVLSACGH G V+EG +Y
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 462 NHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQN 521
+ + + G+ P +HYTC+V LL +AG L+EA+ + P++ D V W +LL A +VH+N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 522 YGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTE 581
G+ +AE +L ++P++ G Y+LLSNMYA+ +W+ V +RK M+ V K+PG SW +
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Query: 582 IRNTTHVFISGDSNHPESSQIYEKVRELSAKIKP 615
I+ HVF+ D +HP QI+ + L A+++P
Sbjct: 637 IQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRP 670
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 227/487 (46%), Gaps = 79/487 (16%)
Query: 119 LKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGA-EGRQCHGYVFKSGLVFCKYVRNALV 177
LKL ++ S + P F+ +L SC +S A R H V KSG +++N L+
Sbjct: 7 LKLAADLSSFTDSSP----FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLI 62
Query: 178 ELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIE-------NECFRGGVE----VLGK 226
+ Y+KC +E +++ D +P +++ +NSV+ GL + + FR E
Sbjct: 63 DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 122
Query: 227 MVSGSVRWDSV--------------------TYVNAFGLSASLKDLKLGLQVHSQMLKSD 266
MVSG + D ++ + + L D+ G+QVHS + KS
Sbjct: 123 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 182
Query: 267 IEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFC 326
DV+I SA++ MY KCG ++A++VF+ + RNVV W +++ QN EAL++F
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 242
Query: 327 GMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSG-FKEHLIVGNALINMYAKG 385
M + P+E T A ++++ A LSA++ G +H + K+ + +I+ NA ++MYAK
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 302
Query: 386 GNI-------------------------------EAANKVFSDMRYRDIITWNAMICGYS 414
I +AA +F+ M R++++WNA+I GY+
Sbjct: 303 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 362
Query: 415 HHGLGREALTLFQNMLAAEERPNHVTFVGVLSACG-----HLGLVQEGFYYLNHLMK-QI 468
+G EAL+LF + P H +F +L AC HLG+ Q + L H K Q
Sbjct: 363 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM-QAHVHVLKHGFKFQS 421
Query: 469 GIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRI 528
G + ++ + K G ++E R ++ D V+W+ ++ QN G+G
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIG--FAQN-GYGNEA 477
Query: 529 AEYILHM 535
E M
Sbjct: 478 LELFREM 484
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 194/415 (46%), Gaps = 50/415 (12%)
Query: 45 DLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSS 104
D+ G +H+ + +S +V + ++LV++Y+KC ++ A+++FD M RNVVS++S
Sbjct: 167 DMNKGVQVHS---LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 223
Query: 105 LMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKS 164
L+T + NG +E L +F+ M+ +EP+E + V+S+C+ G++ HG V K+
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 165 GLVFCKYV-RNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEV 223
+ + NA V++Y KC ++ A+ + D +P +V S+++G + +
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342
Query: 224 LGKMVSGS-VRWDSV------------------------------TYVNAFGLSASLKDL 252
KM + V W+++ ++ N A L +L
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402
Query: 253 KLGLQVHSQMLK------SDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWT 306
LG+Q H +LK S E D+F+ +++I MY KCG VF + R+ V W
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462
Query: 307 AMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEK- 365
AM+ QN Y EAL LF M +P+ T +L++ + G + + +
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 522
Query: 366 ---SGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYR-DIITWNAMICGYSHH 416
+ ++H ++++ + G +E A + +M + D + W +++ H
Sbjct: 523 FGVAPLRDHY---TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 149/329 (45%), Gaps = 42/329 (12%)
Query: 23 QNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCN 82
++R P ++ A +K+G+ +H ++ + RN+ ++L+N+ V++YAKC+
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGR-VVKNDKLRND-IILSNAFVDMYAKCS 303
Query: 83 QISIARQLFDN-------------------------------MRQRNVVSYSSLMTWYLH 111
+I AR +FD+ M +RNVVS+++L+ Y
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 112 NGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCK- 170
NG E L LF ++ +++ P Y F+ +L +C+ G Q H +V K G F
Sbjct: 364 NGENEEALSLF-CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 422
Query: 171 -----YVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLG 225
+V N+L+++Y KC VE + + D +N+++ G +N +E+
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 226 KMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKS-DIEPDVFINSAMISMYGKC 284
+M+ + D +T + ++ G S M + + P + M+ + G+
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 285 GKFSNAKKVFEGLETR-NVVLWTAMVAAC 312
G AK + E + + + V+W +++AAC
Sbjct: 543 GFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 11/215 (5%)
Query: 20 LFKQNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLI---ITTESSRNENVVLTNSLVN 76
L K+ P+ +LK AD +L LG H H++ +S +++ + NSL++
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 77 LYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV-SGDNLEPNE 135
+Y KC + +F M +R+ VS+++++ + NG+ E L+LF+ M+ SG+ +P+
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE--KPDH 493
Query: 136 YIFSIVLSSCSRSGRGAEGRQCHGYVFKS-GLVFCKYVRNALVELYTKCLDVEMAKRLLD 194
VLS+C +G EGR + + G+ + +V+L + +E AK +++
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Query: 195 LLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVS 229
+P + +SV+ G + C LGK V+
Sbjct: 554 EMP----MQPDSVIWGSLLAACKVHRNITLGKYVA 584
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 330/567 (58%), Gaps = 4/567 (0%)
Query: 146 SRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYN 205
+ S + + ++ H V ++G + L+E D+ A+++ D + +F +N
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 206 SVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKS 265
++ G + N+ + + KM VR D TY + L D G +H+ ++K
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 266 DIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLF 325
+ + ++ MY K G+ S+A+ +FE ++ +++V W A +A C Q AL F
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 326 CGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKG 385
M +A++ + FT ML++ L +L G+ ++ K ++IV NA ++M+ K
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 386 GNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVL 445
GN EAA +F +M+ R++++W+ MI GY+ +G REALTLF M RPN+VTF+GVL
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 446 SACGHLGLVQEGFYYLNHLMKQ--IGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVK 503
SAC H GLV EG Y + +++ + P EHY C+V LL ++GLL+EA +F++ PV+
Sbjct: 319 SACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVE 378
Query: 504 WDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTY-ILLSNMYAKEKRWDGVSKI 562
D W LL A VH++ G+++A+ ++ P D+G+Y +LLSN+YA +WD V K+
Sbjct: 379 PDTGIWGALLGACAVHRDMILGQKVADVLVETAP-DIGSYHVLLSNIYAAAGKWDCVDKV 437
Query: 563 RKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDV 622
R M+ KK S E H F GD +HP+S IYEK+ E+ KI+ +GYVPD
Sbjct: 438 RSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDT 497
Query: 623 AAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKL 682
+V HDVE E+KE L+HHSEKLAIA+ L++ P PI V+KNLR CDDCH+ K +S L
Sbjct: 498 CSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSL 557
Query: 683 TKRDIIVRDTNRFHRFQDGCCSCTDYW 709
T +II+RD NRFH F++G CSC ++W
Sbjct: 558 TSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 188/399 (47%), Gaps = 15/399 (3%)
Query: 25 RAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQI 84
+ P + L L ++ SK +L K+ H I+ +N +LT L NL +
Sbjct: 4 KQTPLTKQMLSELLRASSSKPKQLKKI---HAIVLRTGFSEKNSLLTQLLENLVV-IGDM 59
Query: 85 SIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSS 144
ARQ+FD M + + +++L Y+ N E+L L+K M + P+E+ + V+ +
Sbjct: 60 CYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFVVKA 118
Query: 145 CSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEY 204
S+ G + G H +V K G V LV +Y K ++ A+ L + + D+ +
Sbjct: 119 ISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAW 178
Query: 205 NSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLK 264
N+ L ++ +E KM + +V++DS T V+ L L++G +++ + K
Sbjct: 179 NAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 238
Query: 265 SDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNL 324
+I+ ++ + +A + M+ KCG A+ +FE ++ RNVV W+ M+ N EAL L
Sbjct: 239 EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTL 298
Query: 325 FCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSG------FKEHLIVGNAL 378
F M+ E +RPN TF +L++ + + G + + +S KEH +
Sbjct: 299 FTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA---CM 355
Query: 379 INMYAKGGNIEAANKVFSDMRYR-DIITWNAMICGYSHH 416
+++ + G +E A + M D W A++ + H
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 337/572 (58%), Gaps = 6/572 (1%)
Query: 141 VLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYD 200
+L C+R+G E + CHG + + L + N L+ Y+KC VE+A+++ D +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 201 VFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVT---YVNAFGLSASLKDLKLGLQ 257
+ +N+++ N +++ +M + ++ T ++A G++ + K +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK---K 183
Query: 258 VHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEY 317
+H +K+ I+ ++++ +A++ +Y KCG +A +VFE ++ ++ V W++MVA QN+
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 318 FEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNA 377
+EEAL L+ + ++ N+FT + ++ + + L+AL G +HA I KSGF ++ V ++
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 378 LINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPN 437
++MYAK G++ + +FS+++ +++ WN +I G++ H +E + LF+ M PN
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 438 HVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFM 497
VTF +LS CGH GLV+EG + + G+ P + HY+C+V +L +AGLL EA + +
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423
Query: 498 RSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWD 557
+S P W +LL + RV++N AE + ++P + G ++LLSN+YA K+W+
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483
Query: 558 GVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLG 617
++K RKL++ VKK G SW +I++ H F G+S HP +I + L K + G
Sbjct: 484 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543
Query: 618 YVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVK 677
Y P V LHDVE +KE+ L HSEKLA+ + LM P ++P+ ++KNLR+C DCH +K
Sbjct: 544 YKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMK 603
Query: 678 LISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
S T+R IIVRD NRFH F DG CSC D+W
Sbjct: 604 AASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 191/387 (49%), Gaps = 9/387 (2%)
Query: 67 NVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV 126
+V L N L+N Y+KC + +ARQ+FD M +R++VS+++++ Y N E L +F M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM- 153
Query: 127 SGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDV 186
+ + +E+ S VLS+C + E ++ H K+ + YV AL++LY KC +
Sbjct: 154 RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 187 EMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLS 246
+ A ++ + + ++S++ G ++N+ + + + + S+ + T +
Sbjct: 214 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 247 ASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWT 306
++L L G Q+H+ + KS +VF+ S+ + MY KCG + +F ++ +N+ LW
Sbjct: 274 SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 307 AMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKS 366
+++ ++ +E + LF M+ + + PNE TF+ +L+ + G + +
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTT 393
Query: 367 -GFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIIT-WNAMICG---YSHHGLGR- 420
G +++ + ++++ + G + A ++ + + + W +++ Y + L
Sbjct: 394 YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEV 453
Query: 421 EALTLFQNMLAAEERPNHVTFVGVLSA 447
A LF+ L E NHV + +A
Sbjct: 454 AAEKLFE--LEPENAGNHVLLSNIYAA 478
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 49 GKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTW 108
GK +HA + +S NV + +S V++YAKC + + +F ++++N+ ++++++
Sbjct: 282 GKQMHA---VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 109 YLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQ 156
+ + E + LF+ M D + PNE FS +LS C +G EGR+
Sbjct: 339 FAKHARPKEVMILFEKM-QQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/680 (32%), Positives = 357/680 (52%), Gaps = 7/680 (1%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIA 87
P V +L+ DL GK +H H++ ++ + N+L+ +Y KC + A
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVV---RYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 88 RQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSR 147
R LFD M +R+++S++++++ Y NG E L+LF M G +++P+ + V+S+C
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISACEL 309
Query: 148 SGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSV 207
G GR H YV +G V N+L ++Y A++L + D+ + ++
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 208 LNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDI 267
++G N ++ M SV+ D +T A+L DL G+++H +K+ +
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 268 EPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCG 327
V + + +I+MY KC A +F + +NV+ WT+++A N EAL +F
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR 488
Query: 328 MEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGN 387
++PN T L + A + AL G +HAH+ ++G + NAL++MY + G
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 388 IEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSA 447
+ A F+ + +D+ +WN ++ GYS G G + LF M+ + RP+ +TF+ +L
Sbjct: 549 MNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG 607
Query: 448 CGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVV 507
C +V++G Y + M+ G+ P L+HY C+V LL +AG L EA KF++ PV D
Sbjct: 608 CSKSQMVRQGLMYFSK-MEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666
Query: 508 AWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMK 567
W LLNA R+H G A++I +D VG YILL N+YA +W V+K+R++MK
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 568 VRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLH 627
+ + G SW E++ H F+S D HP++ +I + K+ +G +
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSM 786
Query: 628 DVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDI 687
D + +++ HSE+ AIA+ L+ T P PI V KNL MC++CH VK ISK +R+I
Sbjct: 787 DETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREI 846
Query: 688 IVRDTNRFHRFQDGCCSCTD 707
VRD FH F+DG CSC D
Sbjct: 847 SVRDAEHFHHFKDGECSCGD 866
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 241/480 (50%), Gaps = 11/480 (2%)
Query: 58 ITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLE 117
I S + V L N+ + ++ + + A +F M +RN+ S++ L+ Y G+ E
Sbjct: 119 IALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDE 178
Query: 118 TLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALV 177
+ L+ M+ ++P+ Y F VL +C A G++ H +V + G V NAL+
Sbjct: 179 AMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALI 238
Query: 178 ELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSV 237
+Y KC DV+ A+ L D +P D+ +N++++G EN G+E+ M SV D +
Sbjct: 239 TMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLM 298
Query: 238 TYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKKVFEGL 297
T + L D +LG +H+ ++ + D+ + +++ MY G + A+K+F +
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Query: 298 ETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGD 357
E +++V WT M++ N ++A++ + M+ ++++P+E T A +L++ A L L G
Sbjct: 359 ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 358 LLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHG 417
LH K+ ++IV N LINMY+K I+ A +F ++ +++I+W ++I G +
Sbjct: 419 ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN 478
Query: 418 LGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHY 477
EAL + M + PN +T L+AC +G + G H+++ G+ GL+ +
Sbjct: 479 RCFEALIFLRQMKMTLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRT-GV--GLDDF 534
Query: 478 --TCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHM 535
++ + + G ++ A S K DV +W+ LL + G G + E M
Sbjct: 535 LPNALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLTG---YSERGQGSMVVELFDRM 589
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 152/309 (49%), Gaps = 3/309 (0%)
Query: 208 LNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDI 267
L+GL N +++L M V D +V L + + G +V+S L S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 268 EPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCG 327
V + +A ++M+ + G +A VF + RN+ W +V + YF+EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 328 MEY-EAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGG 386
M + ++P+ +TF +L + G+ L G +H H+ + G++ + V NALI MY K G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 387 NIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLS 446
++++A +F M RDII+WNAMI GY +G+ E L LF M P+ +T V+S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 447 ACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDV 506
AC LG + G ++ + G + + + AG EAEK K D+
Sbjct: 306 ACELLGDRRLG-RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK-DI 363
Query: 507 VAWHTLLNA 515
V+W T+++
Sbjct: 364 VSWTTMISG 372
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/660 (32%), Positives = 360/660 (54%), Gaps = 4/660 (0%)
Query: 50 KVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWY 109
K IH LI + + L N L+ Q + LF + + N+ Y+SL+ +
Sbjct: 30 KQIHVSLI---NHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 110 LHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFC 169
++N ETL LF + + L + + F +VL +C+R+ G H V K G
Sbjct: 87 VNNHLFHETLDLFLS-IRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHD 145
Query: 170 KYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVS 229
+L+ +Y+ + A +L D +P V + ++ +G + R +++ KMV
Sbjct: 146 VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE 205
Query: 230 GSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSN 289
V+ DS V + DL G + M + +++ + F+ + ++++Y KCGK
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 290 AKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAG 349
A+ VF+ + +++V W+ M+ N + +E + LF M E ++P++F+ L+S A
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCAS 325
Query: 350 LSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAM 409
L AL G+ + I++ F +L + NALI+MYAK G + +VF +M+ +DI+ NA
Sbjct: 326 LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAA 385
Query: 410 ICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQIG 469
I G + +G + + +F P+ TF+G+L C H GL+Q+G + N +
Sbjct: 386 ISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYA 445
Query: 470 IVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIA 529
+ +EHY C+V L +AG+LD+A + + P++ + + W LL+ R+ ++ +
Sbjct: 446 LKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVL 505
Query: 530 EYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVF 589
+ ++ ++P + G Y+ LSN+Y+ RWD +++R +M + +KK PG SW E+ H F
Sbjct: 506 KELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEF 565
Query: 590 ISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYLNHHSEKLAIAY 649
++ D +HP S +IY K+ +L +++ +G+VP V DVE+E+KE L +HSEKLA+A
Sbjct: 566 LADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVAL 625
Query: 650 ALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCSCTDYW 709
L+ T I V+KNLR+C DCH +KLISK+T+R+I+VRD NRFH F +G CSC DYW
Sbjct: 626 GLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/665 (32%), Positives = 375/665 (56%), Gaps = 7/665 (1%)
Query: 47 KLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLM 106
KLGK IHA ++ S+ + + + N+L+ +Y +C ++ A ++ M +VV+++SL+
Sbjct: 301 KLGKEIHASVL--KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 107 TWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGL 166
Y+ N E L+ F +M++ + + +E + ++++ R G + H YV K G
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 167 VFCKYVRNALVELYTKC-LDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLG 225
V N L+++Y+KC L M + L + D+ + +V+ G +N+C +E+
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRM-HDKDLISWTTVIAGYAQNDCHVEALELFR 476
Query: 226 KMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCG 285
+ + D + + S+ LK + + ++H +L+ + D I + ++ +YGKC
Sbjct: 477 DVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCR 535
Query: 286 KFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLN 345
A +VFE ++ ++VV WT+M+++ N EA+ LF M + + +L+
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILS 595
Query: 346 SAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIIT 405
+AA LSAL G +H ++ + GF + A+++MYA G++++A VF + + ++
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 655
Query: 406 WNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLM 465
+ +MI Y HG G+ A+ LF M P+H++F+ +L AC H GL+ EG +L +
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 715
Query: 466 KQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFG 525
+ + P EHY C+V +L +A + EA +F++ + W LL A R H G
Sbjct: 716 HEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIG 775
Query: 526 RRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNT 585
A+ +L ++P + G +L+SN++A++ RW+ V K+R MK ++K PG SW E+
Sbjct: 776 EIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGK 835
Query: 586 THVFISGDSNHPESSQIYEKVRELSAKI-KPLGYVPDVAAVLHDVEDEQKEDYLNHHSEK 644
H F + D +HPES +IYEK+ E++ K+ + +GYV D VLH+V++ +K L+ HSE+
Sbjct: 836 VHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSER 895
Query: 645 LAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCCS 704
+AIAY L+ TP A + + KNLR+C DCH+ KL+SKL +RDI++RD NRFH F+ G CS
Sbjct: 896 IAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCS 955
Query: 705 CTDYW 709
C D W
Sbjct: 956 CGDSW 960
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 252/524 (48%), Gaps = 22/524 (4%)
Query: 23 QNRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCN 82
+N +P VE +L+ + + G+ +H+ + T S E L LV +Y KC
Sbjct: 75 ENNSP--VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF--ELDFLAGKLVFMYGKCG 130
Query: 83 QISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNM-VSGDNLEPNEYIFSIV 141
+ A ++FD M R ++++++ Y+ NG L L+ NM V G L + F +
Sbjct: 131 SLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS--FPAL 188
Query: 142 LSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLD-LLPGYD 200
L +C++ G + H + K G ++ NALV +Y K D+ A+RL D D
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 201 VFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHS 260
+NS+L+ + +E+ +M +S T V+A KLG ++H+
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 261 QMLKSDI-EPDVFINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFE 319
+LKS ++++ +A+I+MY +CGK A+++ + +VV W +++ QN ++
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 368
Query: 320 EALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALI 379
EAL F M + +E + ++ ++ LS L G LHA++ K G+ +L VGN LI
Sbjct: 369 EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLI 428
Query: 380 NMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHV 439
+MY+K + F M +D+I+W +I GY+ + EAL LF+++ + +
Sbjct: 429 DMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEM 488
Query: 440 TFVGVLSACGHLG---LVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKF 496
+L A L +V+E H++++ G++ + +V + K + A +
Sbjct: 489 ILGSILRASSVLKSMLIVKE---IHCHILRK-GLLDTVIQNE-LVDVYGKCRNMGYATRV 543
Query: 497 MRSTPVKWDVVAWHTLLNASRVHQNYG----FGRRIAEYILHMD 536
S K DVV+W +++++S ++ N RR+ E L D
Sbjct: 544 FESIKGK-DVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 198/406 (48%), Gaps = 11/406 (2%)
Query: 112 NGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVF-CK 170
+G L E F+ + +N P E F+ VL C + ++GRQ H +FK+ F
Sbjct: 61 DGVLTEA---FQRLDVSENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD 116
Query: 171 YVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSG 230
++ LV +Y KC ++ A+++ D +P F +N+++ + N + + M
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 231 SVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNA 290
V ++ A L+D++ G ++HS ++K FI +A++SMY K S A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 291 KKVFEGLETR-NVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAG 349
+++F+G + + + VLW +++++ + E L LF M PN +T L + G
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 350 LSALRHGDLLHAHIEKSG-FKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNA 408
S + G +HA + KS L V NALI MY + G + A ++ M D++TWN+
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 409 MICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMKQI 468
+I GY + + +EAL F +M+AA + + V+ +++A G L + G +++K
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH- 415
Query: 469 GIVPGLEHYTCIVGLLSKAGL-LDEAEKFMRSTPVKWDVVAWHTLL 513
G L+ ++ + SK L F+R D+++W T++
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK--DLISWTTVI 459
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 342/617 (55%), Gaps = 45/617 (7%)
Query: 134 NEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLL 193
+++ F +L + S+ EG + HG FK + +V +++Y C + A+ +
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 194 DLLPGYDVFEYNSVLNGLIENECFRGGVE----VLGKMVSGSVRWDSVTYVNAFGLSASL 249
D + DV +N+ +IE C G V+ + +M +V D + N
Sbjct: 170 DEMSHRDVVTWNT----MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT 225
Query: 250 KDLKLGLQVHSQMLKSDIEPD-------------------------------VFINSAMI 278
+++ ++ ++++D+ D +F+++AM+
Sbjct: 226 GNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMV 285
Query: 279 SMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEF 338
S Y KCG+ +A+ +F+ E +++V WT M++A +++Y +EAL +F M I+P+
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV 345
Query: 339 TFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDM 398
+ ++++ A L L +H+ I +G + L + NALINMYAK G ++A VF M
Sbjct: 346 SMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM 405
Query: 399 RYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGF 458
R++++W++MI S HG +AL+LF M PN VTFVGVL C H GLV+EG
Sbjct: 406 PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 465
Query: 459 YYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRV 518
+ + I P LEHY C+V L +A LL EA + + S PV +VV W +L++A R+
Sbjct: 466 KIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI 525
Query: 519 HQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSS 578
H G+ A+ IL ++P+ G +L+SN+YA+E+RW+ V IR++M+ + V KE G S
Sbjct: 526 HGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Query: 579 WTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDYL 638
+ +H F+ GD H +S++IY K+ E+ +K+K GYVPD +VL DVE+E+K+D +
Sbjct: 586 RIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLV 645
Query: 639 NHHSEKLAIAYALM------ETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDT 692
HSEKLA+ + LM E I ++KNLR+C+DCH KL+SK+ +R+IIVRD
Sbjct: 646 LWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDR 705
Query: 693 NRFHRFQDGCCSCTDYW 709
RFH +++G CSC DYW
Sbjct: 706 TRFHCYKNGLCSCRDYW 722
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 191/412 (46%), Gaps = 51/412 (12%)
Query: 74 LVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEP 133
+++YA C +I+ AR +FD M R+VV++++++ Y G + E KLF+ M N+ P
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM-KDSNVMP 210
Query: 134 NEYIFSIVLSSCSRSGRGAEGRQCHGYV-------------------------------F 162
+E I ++S+C R+G R + ++ F
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 163 KSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVE 222
+ V +V A+V Y+KC ++ A+ + D D+ + ++++ +E++ + +
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 223 VLGKMVSGSVRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYG 282
V +M ++ D V+ + A+L L VHS + + +E ++ IN+A+I+MY
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 283 KCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAV 342
KCG + VFE + RNVV W++M+ A + +AL+LF M+ E + PNE TF
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 343 MLNSAAGLSALRHGDLLHAHI-EKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRY- 400
+L + + G + A + ++ L +++++ + + A +V M
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 401 RDIITWNAMICGYSHHG---LGR--------------EALTLFQNMLAAEER 435
+++ W +++ HG LG+ AL L N+ A E+R
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQR 562
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 151/344 (43%), Gaps = 41/344 (11%)
Query: 233 RWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGKFSNAKK 292
R D +++ + + L G+++H K D F+ + + MY CG+ + A+
Sbjct: 108 RLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARN 167
Query: 293 VFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSA 352
VF+ + R+VV W M+ + +EA LF M+ + P+E ++++
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN 227
Query: 353 LRHGDLLHAHIEKSGFK-------------------------------EHLIVGNALINM 381
+R+ ++ + ++ + +L V A+++
Sbjct: 228 MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSG 287
Query: 382 YAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTF 441
Y+K G ++ A +F +D++ W MI Y +EAL +F+ M + +P+ V+
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 442 VGVLSACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTP 501
V+SAC +LG++ + +++ + G+ L ++ + +K G LD P
Sbjct: 348 FSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 502 VKWDVVAWHTLLNASRVHQNYG-----FGRRIAEYILHMDPNDV 540
+ +VV+W +++NA +H F R E +++PN+V
Sbjct: 407 -RRNVVSWSSMINALSMHGEASDALSLFARMKQE---NVEPNEV 446
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 133/249 (53%), Gaps = 5/249 (2%)
Query: 67 NVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMV 126
N+ ++ ++V+ Y+KC ++ A+ +FD ++++V ++++++ Y+ + + E L++F+ M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 127 SGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYVRNALVELYTKCLDV 186
++P+ V+S+C+ G + + H + +GL + NAL+ +Y KC +
Sbjct: 337 CS-GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 187 EMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGSVRWDSVTYVNA-FGL 245
+ + + + +P +V ++S++N L + + + +M +V + VT+V +G
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 246 SASLKDLKLGLQVHSQMLKS-DIEPDVFINSAMISMYGKCGKFSNAKKVFEGLET-RNVV 303
S S ++ G ++ + M +I P + M+ ++G+ A +V E + NVV
Sbjct: 456 SHS-GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 304 LWTAMVAAC 312
+W ++++AC
Sbjct: 515 IWGSLMSAC 523
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 28 PSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIA 87
P V ++ A+ L K +H+ + + S + + N+L+N+YAKC +
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE---LSINNALINMYAKCGGLDAT 398
Query: 88 RQLFDNMRQRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSR 147
R +F+ M +RNVVS+SS++ +G + L LF M +N+EPNE F VL CS
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM-KQENVEPNEVTFVGVLYGCSH 457
Query: 148 SGRGAEGRQ 156
SG EG++
Sbjct: 458 SGLVEEGKK 466
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/726 (33%), Positives = 380/726 (52%), Gaps = 46/726 (6%)
Query: 24 NRAPPSVEDTLKLLKHSADSKDLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQ 83
N+ P + LL S +DL GK +HA + + +S + L+N VNLY+KC +
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVAS---STYLSNHFVNLYSKCGR 58
Query: 84 IS-------------------------------IARQLFDNMRQRNVVSYSSLMTWYLHN 112
+S IARQLFD + Q + VSY++L++ Y
Sbjct: 59 LSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADA 118
Query: 113 GFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGRQCHGYVFKSGLVFCKYV 172
+ LFK M E + + S ++++C R +Q H + G V
Sbjct: 119 RETFAAMVLFKRM-RKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSV 175
Query: 173 RNALVELYTKC-LDVEMAKRLLDLLPGYDVFEYNSVLNGLIENECFRGGVEVLGKMVSGS 231
NA V Y+K L E + D +NS++ +++ + + +M+
Sbjct: 176 NNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235
Query: 232 VRWDSVTYVNAFGLSASLKDLKLGLQVHSQMLKSDIEPDVFINSAMISMYGKCGK---FS 288
+ D T + SL L G Q H +++K+ + + S +I Y KCG
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 289 NAKKVFEGLETRNVVLWTAMVAACFQNEYF-EEALNLFCGMEYEAIRPNEFTFAVMLNSA 347
+++KVF+ + + ++V+W M++ NE EEA+ F M+ RP++ +F + ++
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 348 AGLSALRHGDLLHAHIEKSGFKEHLI-VGNALINMYAKGGNIEAANKVFSDMRYRDIITW 406
+ LS+ +H KS + I V NALI++Y K GN++ A VF M + +++
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 407 NAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLSACGHLGLVQEGFYYLNHLMK 466
N MI GY+ HG G EAL L+Q ML + PN +TFV VLSAC H G V EG Y N + +
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 467 QIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGR 526
I P EHY+C++ LL +AG L+EAE+F+ + P K VAW LL A R H+N
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE 535
Query: 527 RIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTT 586
R A ++ M P Y++L+NMYA ++W+ ++ +RK M+ ++++K+PG SW E++
Sbjct: 536 RAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK 595
Query: 587 HVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVLHDVEDEQKEDY---LNHHSE 643
HVF++ D +HP ++ E + E+ K+K +GYV D + ++ + D L HHSE
Sbjct: 596 HVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSE 655
Query: 644 KLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRDIIVRDTNRFHRFQDGCC 703
KLA+A+ LM T ++V+KNLR+C DCH+A+K +S + R+IIVRD RFH F+DG C
Sbjct: 656 KLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKC 715
Query: 704 SCTDYW 709
SC DYW
Sbjct: 716 SCGDYW 721
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/623 (34%), Positives = 351/623 (56%), Gaps = 10/623 (1%)
Query: 96 QRNVVSYSSLMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFSIVLSSCSRSGRGAEGR 155
+ +V S++S++ +G E L F +M +L P F + +CS G+
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSM-RKLSLYPTRSSFPCAIKACSSLFDIFSGK 96
Query: 156 QCHGYVFKSGLVFCKYVRNALVELYTKCLDVEMAKRLLDLLPGYDVFEYNSVLNGLIENE 215
Q H F G +V +AL+ +Y+ C +E A+++ D +P ++ + S++ G N
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 216 CFRGGVEVLGKMVSGSVRWDSVTYVNAFGL----SASLKDLKLGL--QVHSQMLKSDIEP 269
V + ++ D ++++ GL SA + GL +HS ++K +
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 270 DVFINSAMISMYGKCGK--FSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCG 327
V + + ++ Y K G+ + A+K+F+ + ++ V + ++++ Q+ EA +F
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 328 M-EYEAIRPNEFTFAVMLNSAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGG 386
+ + + + N T + +L + + ALR G +H + + G ++ +IVG ++I+MY K G
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 387 NIEAANKVFSDMRYRDIITWNAMICGYSHHGLGREALTLFQNMLAAEERPNHVTFVGVLS 446
+E A K F M+ +++ +W AMI GY HG +AL LF M+ + RPN++TFV VL+
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 447 ACGHLGLVQEGFYYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEAEKFMRSTPVKWDV 506
AC H GL EG+ + N + + G+ PGLEHY C+V LL +AG L +A ++ +K D
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 507 VAWHTLLNASRVHQNYGFGRRIAEYILHMDPNDVGTYILLSNMYAKEKRWDGVSKIRKLM 566
+ W +LL A R+H+N + +D ++ G Y+LLS++YA RW V ++R +M
Sbjct: 457 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 516
Query: 567 KVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVRELSAKIKPLGYVPDVAAVL 626
K R + K PG S E+ HVF+ GD HP+ +IYE + EL+ K+ GYV + ++V
Sbjct: 517 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVC 576
Query: 627 HDVEDEQKEDYLNHHSEKLAIAYALMETPPTAPILVIKNLRMCDDCHSAVKLISKLTKRD 686
HDV++E+KE L HSEKLAIA+ +M T P + + V+KNLR+C DCH+ +KLISK+ R+
Sbjct: 577 HDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDRE 636
Query: 687 IIVRDTNRFHRFQDGCCSCTDYW 709
+VRD RFH F+DG CSC DYW
Sbjct: 637 FVVRDAKRFHHFKDGGCSCGDYW 659
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 195/388 (50%), Gaps = 25/388 (6%)
Query: 45 DLKLGKVIHAHLIITTESSRNENVVLTNSLVNLYAKCNQISIARQLFDNMRQRNVVSYSS 104
D+ GK H + S ++ ++++L+ +Y+ C ++ AR++FD + +RN+VS++S
Sbjct: 91 DIFSGKQTHQQAFVFGYQS---DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 105 LMTWYLHNGFLLETLKLFKNMVSGDNLEPNEYIFS-----IVLSSCSRSGRGAEGRQCHG 159
++ Y NG L+ + LFK+++ +N + + V+S+CSR H
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 160 YVFKSGLVFCKYVRNALVELYTKCLD--VEMAKRLLDLLPGYDVFEYNSVLNGLIENECF 217
+V K G V N L++ Y K + V +A+++ D + D YNS+++ ++
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 218 RGGVEVLGKMVSGSVRWDSVTYVNAFGLSASL------KDLKLGLQVHSQMLKSDIEPDV 271
EV ++V V VT+ NA LS L L++G +H Q+++ +E DV
Sbjct: 268 NEAFEVFRRLVKNKV----VTF-NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 272 FINSAMISMYGKCGKFSNAKKVFEGLETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYE 331
+ +++I MY KCG+ A+K F+ ++ +NV WTAM+A + + +AL LF M
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 332 AIRPNEFTFAVMLN--SAAGLSALRHGDLLHAHIEKSGFKEHLIVGNALINMYAKGGNIE 389
+RPN TF +L S AGL + +A + G + L ++++ + G ++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLH-VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 390 AANKVFSDMRYR-DIITWNAMICGYSHH 416
A + M+ + D I W++++ H
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 164/380 (43%), Gaps = 64/380 (16%)
Query: 297 LETRNVVLWTAMVAACFQNEYFEEALNLFCGMEYEAIRPNEFTFAVMLNSAAGLSALRHG 356
++ +V W +++A ++ EAL F M ++ P +F + + + L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 357 DLLHAHIEKSGFKEHLIVGNALINMYAKGGNIEAANKVFSDMRYRDIITWNAMICGYSHH 416
H G++ + V +ALI MY+ G +E A KVF ++ R+I++W +MI GY +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 417 GLGREALTLFQNMLAAEERPNHVTF------VGVLSACG-----------HLGLVQEGF- 458
G +A++LF+++L E + F V V+SAC H +++ GF
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 459 ---------------------YYLNHLMKQIGIVPGLEHYTCIVGLLSKAGLLDEA---- 493
+ QI + Y I+ + +++G+ +EA
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 494 EKFMRSTPVKWDVVAWHTLLNASRVHQNYGFGRRIAEYILHMDPND---VGTYILLSNMY 550
+ +++ V ++ + T+L A G+ I + ++ M D VGT I+ +MY
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII--DMY 332
Query: 551 AKEKRWDGVSKIRKLMKVRKVKKEPGSSWTEIRNTTHVFISGDSNHPESSQIYEKVREL- 609
K R + K MK + V+ SWT + I+G H +++ E +
Sbjct: 333 CKCGRVETARKAFDRMKNKNVR-----SWTAM-------IAGYGMHGHAAKALELFPAMI 380
Query: 610 SAKIKP--LGYVPDVAAVLH 627
+ ++P + +V +AA H
Sbjct: 381 DSGVRPNYITFVSVLAACSH 400
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 261,372,389
Number of Sequences: 539616
Number of extensions: 10935109
Number of successful extensions: 33299
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 25577
Number of HSP's gapped (non-prelim): 2038
length of query: 709
length of database: 191,569,459
effective HSP length: 125
effective length of query: 584
effective length of database: 124,117,459
effective search space: 72484596056
effective search space used: 72484596056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)