Your job contains 1 sequence.
>039874
CSSSSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVG
YTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYH
GWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVV
ANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL
QLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVI
PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR
YAPSVEQTMYHFHSLLHCNLTN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039874
(382 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123914 - symbol:AT4G29890 species:3702 "Arabi... 1400 3.3e-143 1
UNIPROTKB|G4MVI0 - symbol:MGG_12423 "Choline monooxygenas... 368 7.4e-34 1
ASPGD|ASPL0000077543 - symbol:AN8656 species:162425 "Emer... 344 2.6e-31 1
UNIPROTKB|P0ABR7 - symbol:yeaW species:83333 "Escherichia... 332 4.9e-30 1
TIGR_CMR|SPO_3681 - symbol:SPO_3681 "Rieske 2Fe-2S domain... 320 9.1e-29 1
TIGR_CMR|SPO_1590 - symbol:SPO_1590 "Rieske 2Fe-2S domain... 304 4.5e-27 1
TIGR_CMR|CPS_4029 - symbol:CPS_4029 "iron-sulfur cluster-... 260 9.4e-25 2
TIGR_CMR|SPO_3678 - symbol:SPO_3678 "Rieske 2Fe-2S domain... 278 2.6e-24 1
UNIPROTKB|O53311 - symbol:Rv3161c "POSSIBLE DIOXYGENASE" ... 250 1.3e-19 1
UNIPROTKB|P0ABR5 - symbol:hcaE "3-phenylpropionate dioxyg... 221 3.9e-18 2
TIGR_CMR|SPO_A0132 - symbol:SPO_A0132 "aromatic 1,2-dioxy... 229 1.1e-16 1
UNIPROTKB|Q4K9X5 - symbol:xylX "Toluate 1,2-dioxygenase s... 225 3.6e-16 1
UNIPROTKB|Q53122 - symbol:bphA1 "Biphenyl 2,3-dioxygenase... 214 7.2e-15 1
UNIPROTKB|Q8RTL4 - symbol:nbzAc "Oxygenase-alpha NBDO" sp... 178 1.0e-14 2
ASPGD|ASPL0000005313 - symbol:AN6756 species:162425 "Emer... 188 3.4e-14 1
UNIPROTKB|P0A110 - symbol:ndoB "Naphthalene 1,2-dioxygena... 177 3.9e-13 2
ASPGD|ASPL0000005442 - symbol:AN10836 species:162425 "Eme... 186 1.1e-11 1
UNIPROTKB|Q3C1E3 - symbol:tphA2I "Terephthalate 1,2-dioxy... 160 3.6e-10 2
UNIPROTKB|Q3C1D5 - symbol:tphA2II "Terephthalate 1,2-diox... 160 9.4e-10 2
TIGR_CMR|SPO_1451 - symbol:SPO_1451 "aromatic 1,2-dioxyge... 164 3.2e-09 1
ASPGD|ASPL0000004601 - symbol:AN10842 species:162425 "Eme... 93 6.0e-05 2
TAIR|locus:2823671 - symbol:CH1 "CHLORINA 1" species:3702... 120 0.00035 1
TIGR_CMR|GSU_0845 - symbol:GSU_0845 "Rieske 2Fe-2S family... 93 0.00079 1
>TAIR|locus:2123914 [details] [associations]
symbol:AT4G29890 species:3702 "Arabidopsis thaliana"
[GO:0005506 "iron ion binding" evidence=IEA] [GO:0006725 "cellular
aromatic compound metabolic process" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001663 InterPro:IPR015879 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS51296
UniPathway:UPA00529 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005506 GO:GO:0019439 EMBL:AL050352
EMBL:AL161575 UniGene:At.31882 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0019285 eggNOG:COG4638 EMBL:BT028917
IPI:IPI00541045 RefSeq:NP_194718.2 ProteinModelPortal:Q9SZR0
STRING:Q9SZR0 PaxDb:Q9SZR0 PRIDE:Q9SZR0 EnsemblPlants:AT4G29890.1
GeneID:829111 KEGG:ath:AT4G29890 TAIR:At4g29890
HOGENOM:HOG000248945 InParanoid:Q9SZR0 OMA:YAFVYPN PhylomeDB:Q9SZR0
ProtClustDB:CLSN2680166 Genevestigator:Q9SZR0 GermOnline:AT4G29890
GO:GO:0019133 GO:GO:0016708 Uniprot:Q9SZR0
Length = 422
Score = 1400 (497.9 bits), Expect = 3.3e-143, P = 3.3e-143
Identities = 251/366 (68%), Positives = 307/366 (83%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
KLV EF+P+IP+E+A TPPSSWYTDP F + EL RVFY WQ VGY+DQ+K+ +DFF+GR
Sbjct: 56 KLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTGR 115
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+G+V+FVVCRD+NGKIHAFHNVC HHASILA+G+G+KS FVC YHGWTY L G+L+KATR
Sbjct: 116 LGDVDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVKATR 175
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN-VVANEWLGGSSEILSI 194
++GI++F++ E GL PL VA WGPFVLL + + EV+++ +VA+EWLG S LS
Sbjct: 176 MSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELVASEWLGTSVGRLSQ 235
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
G+DS LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL SGL L++YST+++EKVS
Sbjct: 236 GGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKVS 295
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQ C GS G D RLGS+A+YAF+YPNFMINRYGPWMDTNLV+PL P +CKVVFDYF
Sbjct: 296 IQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKVVFDYF 355
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
LD SLKDD+AFI++SL++S++VQMED++LCE VQRGLES AY GRYA VE+ M+HFH
Sbjct: 356 LDPSLKDDEAFIKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHC 414
Query: 375 LLHCNL 380
LLH NL
Sbjct: 415 LLHHNL 420
>UNIPROTKB|G4MVI0 [details] [associations]
symbol:MGG_12423 "Choline monooxygenase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001663 InterPro:IPR015879
InterPro:IPR015881 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS00570 PROSITE:PS51296 GO:GO:0005506
GO:GO:0019439 GO:GO:0004497 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 EMBL:CM001232 KO:K00517 GO:GO:0016708
RefSeq:XP_003715613.1 ProteinModelPortal:G4MVI0
EnsemblFungi:MGG_12423T0 GeneID:5051018 KEGG:mgr:MGG_12423
Uniprot:G4MVI0
Length = 435
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 98/341 (28%), Positives = 168/341 (49%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD-DNGKIH 92
P+SWYT +LE +F R W + + ++ +P D+ + +FV+ RD +G+IH
Sbjct: 32 PASWYTSQDMYSLERRAIFSRKWLLTTHKARIPNPGDWVKYNVAGYQFVIVRDRKDGEIH 91
Query: 93 AFHNVCRHHASILATGSGKKSW-FVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
A HN+CRH A + T S+ F C YHGW+YGL G L KA I F+ + GL P
Sbjct: 92 AMHNICRHRAFPVVTKEEGNSYVFSCKYHGWSYGLKGNLAKAPGYQEIPGFDRAQNGLFP 151
Query: 152 LEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG-GSSEILSINGIDSSLSYLCRREY 209
+ V FV +NM +A + E+ + +++LG E D Y+ ++
Sbjct: 152 IHVHVDCNGFVWVNM--DAGEKPEIAWD---DDFLGIDRQERFQHYNFDD---YVYDHQW 203
Query: 210 TIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
+E NWK+ DNY + YH P +H + S L+SY + EK IQ G E T+
Sbjct: 204 DMEGDWNWKILADNYNEC-YHCPTSHPDIPSIADLNSYYVNT-EKAYIQHF--G--EPTE 257
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
+ G + + +PN +N + +PL P++ ++ ++ + + + D F
Sbjct: 258 EQIANGFRVAATYFWPNASMNVSPHFFMIQRFVPLGPSKSQMRYEVYRNKN-SSDADF-- 314
Query: 328 QSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+++ D +++ ED LC Q+ +++ + +G P +E+
Sbjct: 315 KTISDMYKRIMSEDKYLCANAQKNIDAGVFVNGELHPDLEK 355
>ASPGD|ASPL0000077543 [details] [associations]
symbol:AN8656 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IEA] [GO:0019439 "aromatic compound catabolic
process" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0016708 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, NAD(P)H as one donor, and incorporation of two atoms of
oxygen into one donor" evidence=IEA] InterPro:IPR001663
InterPro:IPR007110 InterPro:IPR015879 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS50835
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 EMBL:BN001303 EMBL:AACD01000158
eggNOG:COG4638 OMA:YAFVYPN GO:GO:0016708 RefSeq:XP_681925.1
ProteinModelPortal:Q5ASS4 EnsemblFungi:CADANIAT00006389
GeneID:2868562 KEGG:ani:AN8656.2 HOGENOM:HOG000217399
OrthoDB:EOG4C2MK4 Uniprot:Q5ASS4
Length = 431
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 90/347 (25%), Positives = 159/347 (45%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W + + +L + D+ + +FV+ RD G+I+A
Sbjct: 29 PASWYTSQEMFELERRAIFSRKWLMTTHKLRLPNAGDWLRYEVAGFQFVLVRDRQGQINA 88
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN+CRH A ++ G F C YHGW+YGL+G L KA + F+ + GL+P+
Sbjct: 89 FHNICRHRAFPVVTEDQGSSRIFACKYHGWSYGLNGKLAKAPGYQDLDGFDKSKNGLLPI 148
Query: 153 EVAT--WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
V +G F+ +N+ +A + E+ + + + IN D + E
Sbjct: 149 HVHIDRYG-FIWVNL--DAKEEPEIAWEDDF-DGIDQQPRMDYINWDDYVFDHTW--EQG 202
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
+ NWK+ DNY + YH H + + L +YS + I S +
Sbjct: 203 GDFNWKILADNYNEC-YHCATTHPDIPAVADLSTYSVDTKDGSIIHDAHSKPEQVA---- 257
Query: 271 RLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFIEQS 329
G + + +PN +N + T +P++PT+ + ++ + + + D D + Q
Sbjct: 258 -AGLQVAATYYFPNASMNVTPNFFFTQRFVPISPTKTSMQYEVYRNKNASDADFDLVNQM 316
Query: 330 LKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
K ++ ED LC Q+ L + + +G P++E+ +F ++
Sbjct: 317 YK---RIMSEDKYLCAYAQKNLNAGVFVNGELHPTMEKGPLYFQKVV 360
>UNIPROTKB|P0ABR7 [details] [associations]
symbol:yeaW species:83333 "Escherichia coli K-12"
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA;IDA]
[GO:0019439 "aromatic compound catabolic process" evidence=IEA]
[GO:0016708 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, NAD(P)H as one
donor, and incorporation of two atoms of oxygen into one donor"
evidence=IEA] [GO:0016705 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen"
evidence=IEA] [GO:0006725 "cellular aromatic compound metabolic
process" evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001663 InterPro:IPR015879 InterPro:IPR015881
InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090
PROSITE:PS00570 PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016702 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 KO:K00517 eggNOG:COG4638
HOGENOM:HOG000248945 GO:GO:0016708 PIR:B64941 RefSeq:NP_416316.1
RefSeq:YP_490063.1 ProteinModelPortal:P0ABR7 SMR:P0ABR7
EnsemblBacteria:EBESCT00000002947 EnsemblBacteria:EBESCT00000018422
GeneID:12930155 GeneID:946325 KEGG:ecj:Y75_p1777 KEGG:eco:b1802
PATRIC:32118921 EchoBASE:EB3282 EcoGene:EG13509 OMA:VCRHRAG
ProtClustDB:CLSK880211 BioCyc:EcoCyc:G6988-MONOMER
BioCyc:ECOL316407:JW5294-MONOMER Genevestigator:P0ABR7
Uniprot:P0ABR7
Length = 374
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 109/369 (29%), Positives = 170/369 (46%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI-GEVE 80
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I GE
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGE-S 71
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI 139
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 72 IVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENV 131
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+F+ + LVP+ + + FV +NM A E+ + G +++L
Sbjct: 132 ANFDSDKAQLVPVRLEEYAGFVFINMDPNATSVED--------QLPGLGAKVLEACPEVH 183
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q
Sbjct: 184 DLKLAARFTTRTPANWKNIVDNYLEC-YHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGF 242
Query: 260 SGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVV---FD-YF 314
+ +E + A + F ++P M+N P VI P + +D YF
Sbjct: 243 AKPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYF 301
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCS-GRY-APSV-----EQ 367
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR A S E
Sbjct: 302 TNEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEH 359
Query: 368 TMYHFHSLL 376
+ HFH+LL
Sbjct: 360 GIAHFHNLL 368
>TIGR_CMR|SPO_3681 [details] [associations]
symbol:SPO_3681 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708 OMA:NVCLHRM
RefSeq:YP_168876.1 ProteinModelPortal:Q5LM82 GeneID:3194623
KEGG:sil:SPO3681 PATRIC:23380849 HOGENOM:HOG000145130
ProtClustDB:CLSK767406 Uniprot:Q5LM82
Length = 380
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 106/375 (28%), Positives = 160/375 (42%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N +P E+A P+ YT+ SF+ EL +F + W VG D L P D+ + +
Sbjct: 15 NTSVPFERARAMPTEVYTEQSFVDAELEYIFRKDWYCVGRADALSAPGDYVACELAGQPI 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
VV RD +G + A NVC H S L G G VCPYH WTY LDG L A +T +
Sbjct: 75 VVLRDRDGDLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTKNEG 134
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
F ++ L + W +V + + EA + V A I G D ++
Sbjct: 135 FCKDQYALPQVRCEEWLGWVFVCLDPEATPVAAQLAEVAAK-----------IEGYDMAN 183
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL-QLD-----------SYSTS 248
S E+ + NWKV +N+++ YH+P H G GL +L+ +Y T
Sbjct: 184 YSEAFYEEHVWDTNWKVLAENFMES-YHLPVCHAGTIGGLSRLEDMICPPGHAAFNYHTI 242
Query: 249 LY-EKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
L E + I + D R + + A +YP+ MI + + P P +
Sbjct: 243 LKDESLRIAMAHPSNDRLEGDARR--TTYLLA-LYPSLMITLTPGYFWYLSLHPKGPGQV 299
Query: 308 KVVF------DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ F D+ D +D+ ++ L ++V +ED E V RGL S G
Sbjct: 300 HIRFGGGMSNDFAADPDAQDNFTALKTLL---DEVNVEDRGCTEKVYRGLCSEVATPGHL 356
Query: 362 APSVEQTMYHFHSLL 376
+ +E+ Y F L
Sbjct: 357 S-HLERPNYDFAKYL 370
>TIGR_CMR|SPO_1590 [details] [associations]
symbol:SPO_1590 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 HOGENOM:HOG000248945
GO:GO:0016708 RefSeq:YP_166831.1 ProteinModelPortal:Q5LT24
GeneID:3193705 KEGG:sil:SPO1590 PATRIC:23376503 KO:K00470
OMA:VENYSEC Uniprot:Q5LT24
Length = 363
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 97/347 (27%), Positives = 148/347 (42%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP+ A E +F R+WQ + QL++P D+ + +G+ + +G I F+N
Sbjct: 12 YYTDPAIFAAEQAGLFARTWQFACHASQLENPGDYLAFDLGDESLFCIKGRDGVIRTFYN 71
Query: 97 VCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
VC+H A L +G+G VCPYH WTY L G L A + F+ + L +
Sbjct: 72 VCQHRAHQLVSGAGSTRVVVCPYHAWTYELTGHLRAAPNAKSVPGFDAAQICLSEIRTEV 131
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWK 216
+ FV +N+ EA + NV A E N D L L E +CNWK
Sbjct: 132 FLGFVFVNLDPEAQPMDHWFPNVRAE------LEAFVPNWSD--LKPLEWVEIPEDCNWK 183
Query: 217 VFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTSL--YEKVSIQRCESGSTEGTDDTHRLG 273
V +NY + YH H ++G ++ ++Y Y C D
Sbjct: 184 VSVENYSEC-YHCSLNHPTFSTGVIRPETYDIQPQGYCLRHTTECNDLGQMSYDIDSGFP 242
Query: 274 SKAIYA--FIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSL 330
+ Y+ F++P F Y G ++T + R V ++ G +++ ++
Sbjct: 243 NNDRYSSWFLWPMFSFQVYPGNLLNTYHWRAVDAGRVVVWRGWYSVGGAENETVR-RMAV 301
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
+D EDI L E VQRGL S Y G + HS+LH
Sbjct: 302 QDRATTVEEDIRLVESVQRGLRSRGYVPGPLVVDPGCGVNSEHSILH 348
>TIGR_CMR|CPS_4029 [details] [associations]
symbol:CPS_4029 "iron-sulfur cluster-binding protein,
Rieske family" species:167879 "Colwellia psychrerythraea 34H"
[GO:0009055 "electron carrier activity" evidence=ISS]
InterPro:IPR001663 InterPro:IPR015879 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS51296
GO:GO:0005506 GO:GO:0019439 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 eggNOG:COG4638
GO:GO:0016708 RefSeq:YP_270687.1 ProteinModelPortal:Q47WY4
STRING:Q47WY4 DNASU:3519867 GeneID:3519867 KEGG:cps:CPS_4029
PATRIC:21470937 HOGENOM:HOG000217650 KO:K00479 OMA:DTEDPRA
ProtClustDB:CLSK2484156 BioCyc:CPSY167879:GI48-4042-MONOMER
Uniprot:Q47WY4
Length = 427
Score = 260 (96.6 bits), Expect = 9.4e-25, Sum P(2) = 9.4e-25
Identities = 53/143 (37%), Positives = 78/143 (54%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PI +L P +Y+D +E+ ++FY+ W VG T ++ D +F + IG+ V R
Sbjct: 30 PITFSL--PQQFYSDADVFQVEMEQIFYKEWLFVGITGEIPDNGNFITLDIGDNPITVIR 87
Query: 86 DDNGKIHAFHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D NG++ AFHN CRH S I GK VCPYH WTY LDG LL A G DF+
Sbjct: 88 DQNGEVRAFHNTCRHRGSKICLVKQGKVPKLVCPYHQWTYELDGNLLFAGTEMG-DDFDK 146
Query: 145 KEFGLVPLEVATWGPFVLLNMGK 167
++GL + G ++ +++ +
Sbjct: 147 NDYGLHKVNCRVAGGYIFVSLSE 169
Score = 71 (30.1 bits), Expect = 9.4e-25, Sum P(2) = 9.4e-25
Identities = 39/152 (25%), Positives = 62/152 (40%)
Query: 229 VPYAHKGLASGLQLDSYSTSLYE-KVSIQ-RCESGSTE--GTDDTHRLGSKAIYAFIYPN 284
+PY H GL+ L E VS+ ++G + G LGS I PN
Sbjct: 262 IPYKHVSHGHGLRNRIVRMPLLEGTVSMTIDGKAGCKKLMGRIKNPDLGSMRILHL--PN 319
Query: 285 FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQV----QMED 340
+ G + VIPL + +V + + KD ++ + QV ++D
Sbjct: 320 SWSHAMGDHLIAFQVIPLGAQKTQVTTKWIVH---KDAVEGVDYDVAQLRQVWDATNVQD 376
Query: 341 IILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
L E Q+G+ S AY G Y+ + E + +F
Sbjct: 377 RTLAENNQKGINSKAYQPGPYSTTFEFGVVNF 408
>TIGR_CMR|SPO_3678 [details] [associations]
symbol:SPO_3678 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708 RefSeq:YP_168873.1
ProteinModelPortal:Q5LM85 GeneID:3196039 KEGG:sil:SPO3678
PATRIC:23380843 OMA:PRMENAG Uniprot:Q5LM85
Length = 369
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 97/370 (26%), Positives = 164/370 (44%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P+++ + P ++YT E V W +G D++ +P DFF+ ++ +V
Sbjct: 14 LPVDRPMGMPGAFYTSQEQFEHEARTVLRTGWHCLGRVDEIPEPGDFFTAQLLNEPLLVV 73
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R D+ + NVCRH LA G G FVC YH W YG DG LL+A R+ F+
Sbjct: 74 RGDDQSVRVMANVCRHRGMPLAEGRGNTKRFVCSYHAWAYGRDGALLRAPRMENA-GFDA 132
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQE--EVDSNVVANEWLGGSSEILSINGIDSSLS 202
K L V W F+ +N+ +A+ E E+D+ + E +E D L
Sbjct: 133 KSCKLPEHAVQLWNGFIYVNLTPDALPFEHPELDAMLAPYE-----TE-------DFHLV 180
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAH-------------KGLASGLQLDSYSTSL 249
++ ++ + NWK +N+++G YH+ H + L SG SY+ +
Sbjct: 181 HVAEEDW--QTNWKCLVENFMEG-YHLSVVHPQTLHGYTPSGLSRKLVSGDGFTSYAANY 237
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPT--RC 307
+ ++ R E G+ G + R S +++A +P + ++ + + + P+ + R
Sbjct: 238 PDNIT-PRGE-GAL-GLSEPERKRS-SLFAK-FPTQVASQAASLLVSLCIFPVNASLIRV 292
Query: 308 KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS-VE 366
K + D +L D I+Q + E+V ED E +Q L S G A E
Sbjct: 293 KWTMSVYRD-NLDHDT--IQQRISLWEEVNREDREKLERMQVALRSAHAVEGPLAEDDFE 349
Query: 367 QTMYHFHSLL 376
T+ F + L
Sbjct: 350 GTIRDFQTWL 359
>UNIPROTKB|O53311 [details] [associations]
symbol:Rv3161c "POSSIBLE DIOXYGENASE" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IEP] InterPro:IPR001663 InterPro:IPR015879
InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090
PROSITE:PS51296 GO:GO:0005886 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0005506 GO:GO:0019439 GO:GO:0010033
GO:GO:0016702 EMBL:BX842582 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 GO:GO:0016708 EMBL:CP003248 PIR:G70946
RefSeq:NP_217677.1 RefSeq:NP_337775.1 RefSeq:YP_006516624.1
SMR:O53311 EnsemblBacteria:EBMYCT00000002614
EnsemblBacteria:EBMYCT00000069112 GeneID:13317969 GeneID:888800
GeneID:923343 KEGG:mtc:MT3250 KEGG:mtu:Rv3161c KEGG:mtv:RVBD_3161c
PATRIC:18128908 TubercuList:Rv3161c HOGENOM:HOG000220611
OMA:NVCLHRM ProtClustDB:CLSK792310 Uniprot:O53311
Length = 382
Score = 250 (93.1 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 65/207 (31%), Positives = 99/207 (47%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQ+ D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQVAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGS-SEILSINGIDSSLSYLCRR 207
L VATW V +N+ +A ++ +E+ G E++ + S S+ R
Sbjct: 147 LPQFAVATWNGLVWINLDADA-EPIAAHLDLTDDEFAGYRLGEMVQVE----SWSHEWR- 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHK 234
NWKV +N + YHV H+
Sbjct: 201 -----ANWKVAAENGHEN-YHVLGLHR 221
>UNIPROTKB|P0ABR5 [details] [associations]
symbol:hcaE "3-phenylpropionate dioxygenase, alpha subunit"
species:83333 "Escherichia coli K-12" [GO:0016708 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, NAD(P)H as one donor, and incorporation of two
atoms of oxygen into one donor" evidence=IEA] [GO:0016705
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen" evidence=IEA]
[GO:0005506 "iron ion binding" evidence=IEA] [GO:0019380
"3-phenylpropionate catabolic process" evidence=IEA;IMP]
[GO:0008695 "3-phenylpropionate dioxygenase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0019439 "aromatic compound catabolic
process" evidence=IEA] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] HAMAP:MF_01648
InterPro:IPR001663 InterPro:IPR015879 InterPro:IPR015881
InterPro:IPR017941 InterPro:IPR020875 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS00570 PROSITE:PS51296 UniPathway:UPA00714
GO:GO:0005506 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016702 GO:GO:0019380 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 eggNOG:COG4638 EMBL:Z37966
PIR:A65031 RefSeq:NP_417033.1 RefSeq:YP_490766.1
ProteinModelPortal:P0ABR5 SMR:P0ABR5 IntAct:P0ABR5 PRIDE:P0ABR5
EnsemblBacteria:EBESCT00000001445 EnsemblBacteria:EBESCT00000016254
GeneID:12932583 GeneID:946998 KEGG:ecj:Y75_p2491 KEGG:eco:b2538
PATRIC:32120473 EchoBASE:EB3229 EcoGene:EG13456
HOGENOM:HOG000105925 KO:K05708 OMA:FRIARNM ProtClustDB:CLSK880425
BioCyc:EcoCyc:PHENYLPRODIOXY-MONOMER
BioCyc:ECOL316407:JW2522-MONOMER
BioCyc:MetaCyc:PHENYLPRODIOXY-MONOMER Genevestigator:P0ABR5
GO:GO:0008695 Uniprot:P0ABR5
Length = 453
Score = 221 (82.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 42/95 (44%), Positives = 55/95 (57%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP LEL R+F R W + + Q+ P DFF+ +GE VV R +G I AF N
Sbjct: 25 YTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQ 84
Query: 98 CRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLL 131
CRH A ++ G F CPYHGW+YG++G L+
Sbjct: 85 CRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELI 119
Score = 61 (26.5 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL 242
+++ I CNWK + + YH ++H AS +Q+
Sbjct: 192 QKWVINCNWKFPAEQFASDQYHALFSH---ASAVQV 224
>TIGR_CMR|SPO_A0132 [details] [associations]
symbol:SPO_A0132 "aromatic 1,2-dioxygenase, alpha
subunit" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006725
"cellular aromatic compound metabolic process" evidence=ISS]
[GO:0016708 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, NAD(P)H as one
donor, and incorporation of two atoms of oxygen into one donor"
evidence=ISS] InterPro:IPR001663 InterPro:IPR015879
InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0016702
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 EMBL:CP000032
GenomeReviews:CP000032_GR GO:GO:0016708 RefSeq:YP_164964.1
ProteinModelPortal:Q5LL94 GeneID:3196890 KEGG:sil:SPOA0132
PATRIC:23381590 HOGENOM:HOG000140937 OMA:KPMAVEL
ProtClustDB:CLSK819118 Uniprot:Q5LL94
Length = 446
Score = 229 (85.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 66/211 (31%), Positives = 100/211 (47%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y D LE+ ++F SW VG+ QLKDP D+ + +IG ++ R NG IH HN
Sbjct: 25 YVDKEVFDLEMEQLFPNSWVYVGHESQLKDPGDYITSKIGHQPILISRHKNGTIHVLHNR 84
Query: 98 CRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLL-----KATRITGIKDFNVKEFGL 149
C H +A+ G+ K +F CPYH W++ DG+LL K TG + K+ GL
Sbjct: 85 CPHKGVKIASEPCGNTGK-FFRCPYHAWSFKTDGSLLAIPLKKGYEGTGFDNDRAKD-GL 142
Query: 150 VPLE-VATWGPFVLLNMGKEAVHQEEV--DSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
+E V + F+ + + E+ DS + + S + + I + + Y+
Sbjct: 143 PRVENVHIYRGFIFARLSDTGLSFEDYFGDSLSTIDNMVDRSPKG-EVEIIAAPIRYM-- 199
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLA 237
+T CNWK+ DN D H AH+ A
Sbjct: 200 --HT--CNWKMLVDNQTDT-CHPMVAHESSA 225
>UNIPROTKB|Q4K9X5 [details] [associations]
symbol:xylX "Toluate 1,2-dioxygenase subunit alpha"
species:220664 "Pseudomonas protegens Pf-5" [GO:0018624 "toluene
dioxygenase activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0016702
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 eggNOG:COG4638
HOGENOM:HOG000140938 RefSeq:YP_260958.1 ProteinModelPortal:Q4K9X5
STRING:Q4K9X5 GeneID:3476260 KEGG:pfl:PFL_3858 PATRIC:19877103
KO:K05549 OMA:MLCRRKT ProtClustDB:CLSK862340
BioCyc:PFLU220664:GIX8-3890-MONOMER GO:GO:0018624
InterPro:IPR017639 TIGRFAMs:TIGR03229 Uniprot:Q4K9X5
Length = 454
Score = 225 (84.3 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 62/211 (29%), Positives = 102/211 (48%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
+TDP LE+ +F +W + + Q+ +P D++S +G + R+ NG+++AF N
Sbjct: 28 FTDPRLFDLEMQHIFEGNWLYLAHESQIPNPNDYYSTTMGRQPVFIARNKNGELNAFINA 87
Query: 98 CRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
C H ++L +G K+ F CP+HGWT+ G LLK +KD + P
Sbjct: 88 CSHRGAMLCRHKTGNKASFTCPFHGWTFNNTGKLLK------VKDPAAAGY---PASFNC 138
Query: 157 WGPFVLLNMGKEAVHQE----EVDSNVVAN-EWLGGSSEILSINGIDSSLSYL--CR--R 207
G L + + ++ ++ +V+ E LG S++I+ + +D S L R
Sbjct: 139 EGSHDLTRVARFESYRGFLFGSLNPDVLPLVEHLGESAKIIDMI-VDQSADGLEVLRGSS 197
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLAS 238
Y E NWK+ +N DG YHV H A+
Sbjct: 198 SYIYEGNWKLTAENGADG-YHVSSVHWNYAA 227
>UNIPROTKB|Q53122 [details] [associations]
symbol:bphA1 "Biphenyl 2,3-dioxygenase alpha subunit"
species:101510 "Rhodococcus jostii RHA1" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001663 InterPro:IPR015879
InterPro:IPR015881 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS00570 PROSITE:PS51296 GO:GO:0005506
GO:GO:0019439 GO:GO:0016702 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 eggNOG:COG4638 HOGENOM:HOG000105925
ProtClustDB:CLSK880425 EMBL:CP000432 EMBL:D32142 RefSeq:YP_707265.1
PDB:1ULI PDB:1ULJ PDBsum:1ULI PDBsum:1ULJ SMR:Q53122 IntAct:Q53122
STRING:Q53122 GeneID:4225185 GenomeReviews:CP000432_GR
KEGG:rha:RHA1_ro08060 PATRIC:23213686 KO:K08689 OMA:DMYHAGT
BioCyc:RJOS101510:GJJ1-7339-MONOMER BRENDA:1.14.12.18
EvolutionaryTrace:Q53122 GO:GO:0018687 Uniprot:Q53122
Length = 460
Score = 214 (80.4 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 58/211 (27%), Positives = 96/211 (45%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTD + EL R+F RSW ++G+ Q+ DF + +GE +V R NG+I F N
Sbjct: 38 YTDEALYEQELERIFGRSWLLMGHETQIPKAGDFMTNYMGEDPVMVVRQKNGEIRVFLNQ 97
Query: 98 CRHHASIL--ATGSGKKSWFVCPYHGWTYGLDGTLLKAT-RITGIKDFNVKEFGLVPLEV 154
CRH + A G KS F C YHGW Y G L+ +++G + V
Sbjct: 98 CRHRGMRICRADGGNAKS-FTCSYHGWAYDTGGNLVSVPFEEQAFPGLRKEDWGPLQARV 156
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS--INGIDSSLSYLCR-REYTI 211
T+ + N +A ++D+ +LG + + ++ ++ + +++ I
Sbjct: 157 ETYKGLIFANWDADA---PDLDT------YLGEAKFYMDHMLDRTEAGTEAIPGIQKWVI 207
Query: 212 ECNWKVFCDNYLDGGYHV-PYAH-KGLASGL 240
CNWK + + YH +H G+ +GL
Sbjct: 208 PCNWKFAAEQFCSDMYHAGTTSHLSGILAGL 238
>UNIPROTKB|Q8RTL4 [details] [associations]
symbol:nbzAc "Oxygenase-alpha NBDO" species:58226
"Comamonas sp. JS765" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001663 InterPro:IPR015879 InterPro:IPR015881
InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090
PROSITE:PS00570 PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708
EMBL:AF379638 PDB:2BMO PDB:2BMQ PDB:2BMR PDBsum:2BMO PDBsum:2BMQ
PDBsum:2BMR ProteinModelPortal:Q8RTL4 SMR:Q8RTL4 DIP:DIP-45324N
IntAct:Q8RTL4 BioCyc:MetaCyc:MONOMER-5183 EvolutionaryTrace:Q8RTL4
Uniprot:Q8RTL4
Length = 447
Score = 178 (67.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 36/104 (34%), Positives = 51/104 (49%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E LT + D EL +F R+W + + + P D+ ++G E +V R +
Sbjct: 9 EAGLTQKLLIHGDKELFQHELKTIFARNWLFLTHDSLIPSPGDYVKAKMGVDEVIVSRQN 68
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTL 130
+G + AF NVCRH L +G FVC YHGW YG +G L
Sbjct: 69 DGSVRAFLNVCRHRGKTLVHAEAGNAKGFVCGYHGWGYGSNGEL 112
Score = 78 (32.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKG-LASGLQLDSY---STSLY-EKVSIQRCES-GSTE 264
++ NWK F +N++ GYHV + H L +G + S + L E +Q GS
Sbjct: 189 VKANWKSFAENFVGDGYHVGWTHAAALRAGQSVFSSIAGNAKLPPEGAGLQMTSKYGSGM 248
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA 324
G + G+ + A + P+ M +G L + R ++ + FL+G++ + +
Sbjct: 249 GVFWGYYSGNFS--ADMIPDLMA--FGAAKQEKLAKEIGDVRARI-YRSFLNGTIFPNNS 303
Query: 325 FIEQS 329
F+ S
Sbjct: 304 FLTGS 308
>ASPGD|ASPL0000005313 [details] [associations]
symbol:AN6756 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0006725 "cellular aromatic
compound metabolic process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001663 InterPro:IPR017941 Pfam:PF00355
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 GO:GO:0016491
EMBL:BN001301 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0006725 EMBL:AACD01000112 eggNOG:COG4638 RefSeq:XP_664360.1
ProteinModelPortal:Q5AY74 EnsemblFungi:CADANIAT00007550
GeneID:2870249 KEGG:ani:AN6756.2 Uniprot:Q5AY74
Length = 177
Score = 188 (71.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 18 VYEFNPQIPIEKA-LTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
++ + P E+A + P+SWY + LE + + W ++ + ++ D+ I
Sbjct: 4 LFSYFPSTGKEQAPRSLPASWYRSEAMYQLERRAILSKRWMLLTHCNRFNKAGDYLFFII 63
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+ F + R +G+++ FHN+CRH A ++ G C Y+GW+YGL G L KA R
Sbjct: 64 ADFSFFLVRVRDGRVNGFHNICRHRAYPVVRAREGTAPILTCRYYGWSYGLRGNLAKAPR 123
Query: 136 ITGIKDFN 143
+ +F+
Sbjct: 124 FETLPNFD 131
>UNIPROTKB|P0A110 [details] [associations]
symbol:ndoB "Naphthalene 1,2-dioxygenase subunit alpha"
species:303 "Pseudomonas putida" [GO:0005515 "protein binding"
evidence=IPI] UniPathway:UPA00082 InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0016702
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 EMBL:M23914
EMBL:U49496 EMBL:M83949 EMBL:AF010471 EMBL:AF004284 PIR:JN0644
PIR:JS0071 RefSeq:NP_863072.1 RefSeq:YP_534822.1 PDB:1EG9 PDB:1NDO
PDB:1O7G PDB:1O7H PDB:1O7M PDB:1O7N PDB:1O7P PDB:1O7W PDB:1UUV
PDB:1UUW PDBsum:1EG9 PDBsum:1NDO PDBsum:1O7G PDBsum:1O7H
PDBsum:1O7M PDBsum:1O7N PDBsum:1O7P PDBsum:1O7W PDBsum:1UUV
PDBsum:1UUW ProteinModelPortal:P0A110 SMR:P0A110 IntAct:P0A110
MINT:MINT-257428 GeneID:1343187 GeneID:3974209
ProtClustDB:CLSK644467 BioCyc:MetaCyc:MONOMER-12802
EvolutionaryTrace:P0A110 GO:GO:0018625 Uniprot:P0A110
Length = 449
Score = 177 (67.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 21 FNPQIPI-EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEV 79
+N +I + E L+ + D EL +F R+W + + + P D+ + ++G
Sbjct: 3 YNNKILVSESGLSQKHLIHGDEELFQHELKTIFARNWLFLTHDSLIPAPGDYVTAKMGID 62
Query: 80 EFVVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTL 130
E +V R ++G I AF NVCRH ++++ +G FVC YHGW +G +G L
Sbjct: 63 EVIVSRQNDGSIRAFLNVCRHRGKTLVSVEAGNAKGFVCSYHGWGFGSNGEL 114
Score = 64 (27.6 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 211 IECNWKVFCDNYLDGGYHVPYAH-KGLASG 239
I+ NWK +N++ YHV + H L SG
Sbjct: 191 IKANWKAPAENFVGDAYHVGWTHASSLRSG 220
>ASPGD|ASPL0000005442 [details] [associations]
symbol:AN10836 species:162425 "Emericella nidulans"
[GO:0019439 "aromatic compound catabolic process" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=IEA] [GO:0016708
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, NAD(P)H as one
donor, and incorporation of two atoms of oxygen into one donor"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439
EMBL:BN001301 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0016708 EnsemblFungi:CADANIAT00007400 OMA:IEHISAY
Uniprot:C8V157
Length = 445
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 63/240 (26%), Positives = 99/240 (41%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ K L P W T S LE +F + W + T P + + + +
Sbjct: 51 VTKELDLPVDWLTSRSICELERRAIFSKEWLPLTLTPLFPSPGVYHTTTPAGIPLFAIKS 110
Query: 87 DNGKIHAFHNVCRHHA-SIL--ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
+ +I FHNVCRH A ++ SGK C YHGW+Y G L+KA + G++ F
Sbjct: 111 KDSRIRVFHNVCRHRAYPVIYKERDSGKSLVLACRYHGWSYDSCGKLIKAPKFDGLEGFE 170
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ GL + V +N+ E +E D V E +G + ++ GI S
Sbjct: 171 RSQNGLFGVRTKVINGVVWVNLSMEET--DEDDGKV--EEGIGMNVRMVEDIGIKIGKS- 225
Query: 204 LCRREYTIECNWKVFCDNYLDGGYH----VPYAHKGLASGLQLDSYSTSLYEKV--SIQR 257
+W ++GG++ +P H A G++ S SLY + +IQR
Sbjct: 226 ----------SW--IGGGVMEGGFNWKMALPTKHLTNALGIEHISAYPSLYRSLIYAIQR 273
>UNIPROTKB|Q3C1E3 [details] [associations]
symbol:tphA2I "Terephthalate 1,2-dioxygenase, terminal
oxygenase component subunit alpha 1" species:34028 "Comamonas sp."
[GO:0005506 "iron ion binding" evidence=IDA] [GO:0018628
"terephthalate 1,2-dioxygenase activity" evidence=IDA] [GO:0018963
"phthalate metabolic process" evidence=IDA] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0016702
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0018963
EMBL:AB238678 ProteinModelPortal:Q3C1E3 GO:GO:0018628
Uniprot:Q3C1E3
Length = 413
Score = 160 (61.4 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 62/212 (29%), Positives = 88/212 (41%)
Query: 34 PSSWYTDPSFLALELHRVFYRS--WQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
P YTD + E R+ YR W + ++ DF + GE VV RD + +I
Sbjct: 17 PFGIYTDTANADQEQQRI-YRGEVWNYLCLESEIPGAGDFRTTFAGETPIVVVRDADQEI 75
Query: 92 HAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIK-------DFN 143
+AF N C H +++A SG+ F C YH W+Y G L G+K F
Sbjct: 76 YAFENRCAHRGALIALEKSGRTDSFQCVYHAWSYNRQGDLTGVAFEKGVKGQGGMPASFC 135
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS-INGI-DSSL 201
+E G L VA F L G E+V S ++LG EI I + +
Sbjct: 136 KEEHGPRKLRVAV---FCGLVFGS---FSEDVPS---IEDYLG--PEICERIERVLHKPV 184
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAH 233
+ R + NWK++ +N D YH H
Sbjct: 185 EVIGRFTQKLPNNWKLYFENVKDS-YHASLLH 215
Score = 53 (23.7 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 315 LDGSLKDDKAFIEQSLK-DSEQVQMEDIILCEGVQ 348
+D S KDD ++ +Q+++ D+E+ +++D L EG +
Sbjct: 247 IDRSAKDD-SYKDQAIRSDNERYRLKDPSLLEGFE 280
>UNIPROTKB|Q3C1D5 [details] [associations]
symbol:tphA2II "Terephthalate 1,2-dioxygenase, terminal
oxygenase component subunit alpha 2" species:34028 "Comamonas sp."
[GO:0005506 "iron ion binding" evidence=IDA] [GO:0018628
"terephthalate 1,2-dioxygenase activity" evidence=IDA] [GO:0018963
"phthalate metabolic process" evidence=IDA] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0016702
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0018963
GO:GO:0018628 EMBL:AB238679 Uniprot:Q3C1D5
Length = 413
Score = 160 (61.4 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 62/212 (29%), Positives = 88/212 (41%)
Query: 34 PSSWYTDPSFLALELHRVFYRS--WQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
P YTD + E R+ YR W + ++ DF + GE VV RD + +I
Sbjct: 17 PFGIYTDTANADQEQQRI-YRGEVWNYLCLESEIPGAGDFRTTFAGETPIVVVRDADQEI 75
Query: 92 HAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIK-------DFN 143
+AF N C H +++A SG+ F C YH W+Y G L G+K F
Sbjct: 76 YAFENRCAHRGALIALEKSGRTDSFQCVYHAWSYNRQGDLTGVAFEKGVKGQGGMPASFC 135
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS-INGI-DSSL 201
+E G L VA F L G E+V S ++LG EI I + +
Sbjct: 136 KEEHGPRKLRVAV---FCGLVFGS---FSEDVPS---IEDYLG--PEICERIERVLHKPV 184
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAH 233
+ R + NWK++ +N D YH H
Sbjct: 185 EVIGRFTQKLPNNWKLYFENVKDS-YHASLLH 215
Score = 49 (22.3 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 315 LDGSLKDDKAFIEQSLK-DSEQVQMEDIILCEGVQ 348
+D KDD ++ +Q+++ D+E+ +++D L EG +
Sbjct: 247 IDRGAKDD-SYKDQAIRSDNERYRLKDPSLLEGFE 280
>TIGR_CMR|SPO_1451 [details] [associations]
symbol:SPO_1451 "aromatic 1,2-dioxygenase, alpha subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006725 "cellular
aromatic compound metabolic process" evidence=ISS] [GO:0016708
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, NAD(P)H as one
donor, and incorporation of two atoms of oxygen into one donor"
evidence=ISS] InterPro:IPR001663 InterPro:IPR015879
InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090
PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0016702 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708
HOGENOM:HOG000140937 ProtClustDB:CLSK819118 RefSeq:YP_166692.1
ProteinModelPortal:Q5LTG3 DNASU:3192871 GeneID:3192871
KEGG:sil:SPO1451 PATRIC:23376219 OMA:ENGTTER Uniprot:Q5LTG3
Length = 441
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 50/208 (24%), Positives = 92/208 (44%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y + LE+ +F +W VG+ Q + D+ + ++G+ ++ R +G++ +N
Sbjct: 20 YISDAVYRLEMRHLFTNAWIFVGHDSQTPNKGDYITTQVGDQPVIMVRHTDGEVKVLYNR 79
Query: 98 CRHHASILATG-SGKKS-WFVCPYHGWTYGLDGTLL-----KATRITGIKDF-NVKEFGL 149
C H + +A +G +F CPYH W++ DG LL K TG+ + N K
Sbjct: 80 CPHKGTKIAIDRAGNTGKFFRCPYHAWSFKTDGCLLAIPLKKGYEGTGLSESQNGKGMQA 139
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
V V + FV + ++ + +E +++ + + ++ S L Y
Sbjct: 140 VGA-VYNYRGFVFARLAEDGIGFDEFFGGSLSS--IDNMVDRAPEGRVEISGPPL---RY 193
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLA 237
+CNWK+ +N D H AH+ A
Sbjct: 194 MHKCNWKMLVENQTDT-CHPMVAHESSA 220
>ASPGD|ASPL0000004601 [details] [associations]
symbol:AN10842 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0019439 "aromatic compound
catabolic process" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0016708 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, NAD(P)H as one donor, and incorporation of two
atoms of oxygen into one donor" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR015879 Pfam:PF00848
GO:GO:0005506 GO:GO:0019439 EMBL:BN001301 GO:GO:0051537
GO:GO:0016708 EnsemblFungi:CADANIAT00007399 HOGENOM:HOG000048640
Uniprot:C8V156
Length = 285
Score = 93 (37.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 277 IYAFIYPNFMINRYGPWMDTNLVIPLA-PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQ 335
++ + +PN +N YG M + V P P ++ FDY+ ++ + F E+ + Q
Sbjct: 155 LFLYFFPNCTLNVYGGGMSSFRVCPTDDPGVTRMEFDYY---HMESGEKF-EEYYRFVRQ 210
Query: 336 VQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
V ED LCE Q L Y G P E
Sbjct: 211 VATEDYELCEKAQANLNKGVYREGILNPEKE 241
Score = 71 (30.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVG 60
E A T P+SWY LE VF +SW ++G
Sbjct: 3 ELARTLPASWYCSQPLYQLERRAVFLKSWYLLG 35
>TAIR|locus:2823671 [details] [associations]
symbol:CH1 "CHLORINA 1" species:3702 "Arabidopsis
thaliana" [GO:0005506 "iron ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;ISS;IDA] [GO:0010277 "chlorophyllide a
oxygenase [overall] activity" evidence=IEA;IDA;IMP] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016705 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0015995 "chlorophyll biosynthetic
process" evidence=RCA;IMP] [GO:0009706 "chloroplast inner membrane"
evidence=IDA] [GO:0042651 "thylakoid membrane" evidence=IDA]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR013626 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF08417 PROSITE:PS51296 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005506 GO:GO:0009706 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0009535 GO:GO:0042651
GO:GO:0016705 EMBL:AB021316 EMBL:AF177200 EMBL:AB030565
EMBL:AC084807 EMBL:AY128357 EMBL:BT002075 IPI:IPI00519476
IPI:IPI00521014 IPI:IPI00532566 PIR:T52458 RefSeq:NP_175088.1
RefSeq:NP_973969.1 RefSeq:NP_973970.1 UniGene:At.19047
ProteinModelPortal:Q9MBA1 SMR:Q9MBA1 STRING:Q9MBA1 PaxDb:Q9MBA1
PRIDE:Q9MBA1 EnsemblPlants:AT1G44446.1 GeneID:841029
KEGG:ath:AT1G44446 TAIR:At1g44446 eggNOG:COG4638
HOGENOM:HOG000012389 InParanoid:Q9MBA1 KO:K13600 OMA:QCATHLH
PhylomeDB:Q9MBA1 ProtClustDB:PLN02281 BioCyc:ARA:AT1G44446-MONOMER
BioCyc:MetaCyc:AT1G44446-MONOMER BRENDA:1.13.12.14
Genevestigator:Q9MBA1 GermOnline:AT1G44446 GO:GO:0010277
GO:GO:0015995 Uniprot:Q9MBA1
Length = 536
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 31/104 (29%), Positives = 44/104 (42%)
Query: 56 WQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWF 115
W V +T LK E +V+ R ++GK N C H A L G+ +
Sbjct: 221 WYPVAFTADLKH-DTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRI 279
Query: 116 VCPYHGWTYGLDGTLLK--ATRITGIKDFNVKEFGLVPLEVATW 157
CPYHGW Y DG K +T++ +K +K + E W
Sbjct: 280 QCPYHGWEYSTDGECKKMPSTKLLKVK---IKSLPCLEQEGMIW 320
>TIGR_CMR|GSU_0845 [details] [associations]
symbol:GSU_0845 "Rieske 2Fe-2S family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR017941 Pfam:PF00355
PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 HOGENOM:HOG000128541 ProtClustDB:CLSK828052
RefSeq:NP_951902.1 ProteinModelPortal:Q74EW4 GeneID:2687147
KEGG:gsu:GSU0845 PATRIC:22024449 OMA:ACENYCP
BioCyc:GSUL243231:GH27-846-MONOMER Uniprot:Q74EW4
Length = 103
Score = 93 (37.8 bits), Expect = 0.00079, P = 0.00079
Identities = 25/70 (35%), Positives = 31/70 (44%)
Query: 80 EFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGL-DGTLLKATRITG 138
E VV +D G I A N C H S + G K CP HGW Y L +G T
Sbjct: 23 EEVVLINDKGTITACENYCPHQGSPMLAGVVKDGAISCPRHGWHYDLANGACTDHPGYT- 81
Query: 139 IKDFNVKEFG 148
+K + V+ G
Sbjct: 82 LKTYRVEVVG 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 382 382 0.00091 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 626 (67 KB)
Total size of DFA: 296 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.21u 0.10s 30.31t Elapsed: 00:00:02
Total cpu time: 30.22u 0.10s 30.32t Elapsed: 00:00:02
Start: Mon May 20 16:07:50 2013 End: Mon May 20 16:07:52 2013