BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039874
(382 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225445955|ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplastic [Vitis vinifera]
gi|297735449|emb|CBI17889.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 286/368 (77%), Positives = 326/368 (88%)
Query: 14 AQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS 73
A L+++FNP+IP+E+ALTPPSSWYTDPSFLALEL RVFYR WQ VGYT+Q+K+P+DFF+
Sbjct: 73 APTLLHKFNPRIPVEQALTPPSSWYTDPSFLALELDRVFYRGWQAVGYTEQIKNPRDFFT 132
Query: 74 GRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKA 133
GR+G VEFVVCRD+NGK+HAFHNVCRHHAS+LA GSG+KS FVCPYH WTYGLDG LLKA
Sbjct: 133 GRLGNVEFVVCRDNNGKLHAFHNVCRHHASLLAYGSGQKSCFVCPYHAWTYGLDGALLKA 192
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
TRITGIKDF++ EFGL+PL +ATWGPFVLLN+ + Q E DS +V EWLG SS+ILS
Sbjct: 193 TRITGIKDFSINEFGLIPLRIATWGPFVLLNINNDVSPQHEADSKIVGKEWLGSSSDILS 252
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
GID+SLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL+L+SYST+ +E+V
Sbjct: 253 NGGIDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLESYSTTTFERV 312
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
SIQ CE G E DD RLG+KA+YAFIYPNFMINRYGPWMDTNLV+PL P CKVVFDY
Sbjct: 313 SIQSCEGGPGESEDDFDRLGTKALYAFIYPNFMINRYGPWMDTNLVLPLGPRTCKVVFDY 372
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
FL+ SLKDDKAFIE+SL+DSE+VQMEDIILCEGVQRGLESPAYCSGRYAP+VE M+HFH
Sbjct: 373 FLEASLKDDKAFIERSLEDSERVQMEDIILCEGVQRGLESPAYCSGRYAPTVEMAMHHFH 432
Query: 374 SLLHCNLT 381
LLH NLT
Sbjct: 433 CLLHENLT 440
>gi|224087207|ref|XP_002308100.1| predicted protein [Populus trichocarpa]
gi|222854076|gb|EEE91623.1| predicted protein [Populus trichocarpa]
Length = 409
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 278/363 (76%), Positives = 318/363 (87%), Gaps = 1/363 (0%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV EF+P IPIEKALTPPSSWYTDPSF ELHRVFY+ WQ VGYT+Q+K+P+DFF+G
Sbjct: 43 QNLVDEFDPNIPIEKALTPPSSWYTDPSFFDFELHRVFYKGWQAVGYTEQIKNPRDFFTG 102
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G VEF+VCRDD+GKIHAFHNVCRHHAS++A+G+G+KS FVCPYHGWTYGLDG LLKAT
Sbjct: 103 RLGNVEFLVCRDDDGKIHAFHNVCRHHASLVASGNGQKSCFVCPYHGWTYGLDGALLKAT 162
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
RITGI++F+V EFGL PL VATWGPFVLLN+ KE + Q+E D N V +EWLG SE L+
Sbjct: 163 RITGIQNFDVNEFGLKPLNVATWGPFVLLNLDKEILPQQEAD-NTVGSEWLGSCSEYLAA 221
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
NG+DSSLSYLCRR Y IECNWKVFCDNYLDGGYHVPYAHKGLASGL+L+SYST YEKVS
Sbjct: 222 NGVDSSLSYLCRRVYDIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLNSYSTKTYEKVS 281
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQ C+ GSTE DD RLGSKA+YAFIYPNFMINRYGPWMDTNLV+PL P +C+V+FDYF
Sbjct: 282 IQSCDGGSTESEDDIDRLGSKALYAFIYPNFMINRYGPWMDTNLVLPLGPRKCQVIFDYF 341
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ LKDDK FIE+SL DSE+VQ+EDI+LCEGVQRGLE+PAYCSGRYAP VE M+HFH
Sbjct: 342 IEAHLKDDKDFIERSLVDSERVQIEDIVLCEGVQRGLETPAYCSGRYAPMVEHAMHHFHQ 401
Query: 375 LLH 377
LLH
Sbjct: 402 LLH 404
>gi|398806204|gb|AFP19450.1| choline monooxygenase [Camellia sinensis]
Length = 434
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/374 (73%), Positives = 324/374 (86%), Gaps = 1/374 (0%)
Query: 9 ENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
E L A++LVY+F+P+IP+E+ALTPPSSWYT PSFL+LE RVF+R WQ VG T+Q+K+
Sbjct: 62 ETLDEARRLVYQFDPKIPLEEALTPPSSWYTQPSFLSLEFDRVFFRGWQAVGCTEQIKES 121
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG 128
+FF+GR+G VE+VVCRDDNG +HAFHNVCRHHAS+LA+GSG S FVCPYHGWTY LDG
Sbjct: 122 GNFFTGRLGNVEYVVCRDDNGNVHAFHNVCRHHASLLASGSGLLSCFVCPYHGWTYXLDG 181
Query: 129 TLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGS 188
LLKATRITGI++FNV EFGL+PL+VA WGPFVLLN+ ++ Q+ D N + EWLG S
Sbjct: 182 ALLKATRITGIRNFNVNEFGLIPLKVAIWGPFVLLNL-EDIPPQQAADVNNIGKEWLGSS 240
Query: 189 SEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTS 248
SEILS NG+DSSLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHKGL+SGL L+SYST+
Sbjct: 241 SEILSTNGVDSSLSYICRREYTIECNWKVFCDNYLDGGYHVPYAHKGLSSGLNLESYSTT 300
Query: 249 LYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+EKVSIQ+C+ GS E ++ RLGSKA+YAFIYPNFMINRYGPWMDTNLV+P+ +C+
Sbjct: 301 TFEKVSIQQCDGGSAETENEYERLGSKALYAFIYPNFMINRYGPWMDTNLVLPIGSRKCQ 360
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
V+FDYFLD SLK+D AFIE SL+DSE+VQMEDIILCEGVQRGLESPAYCSGRYAPSVE+
Sbjct: 361 VIFDYFLDTSLKEDIAFIESSLEDSERVQMEDIILCEGVQRGLESPAYCSGRYAPSVEKA 420
Query: 369 MYHFHSLLHCNLTN 382
M+HFH LL+ NL N
Sbjct: 421 MHHFHCLLYHNLIN 434
>gi|356562034|ref|XP_003549280.1| PREDICTED: choline monooxygenase, chloroplastic-like [Glycine max]
Length = 418
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 267/371 (71%), Positives = 325/371 (87%)
Query: 11 LVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD 70
L Q+LV+ FNP+ PIE+A+TPP+SWYT PSF LEL RVFYR WQVVG T+Q+KDP+D
Sbjct: 47 LSQTQRLVHHFNPKTPIEEAVTPPTSWYTHPSFFHLELDRVFYRGWQVVGSTEQIKDPRD 106
Query: 71 FFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTL 130
+F+GR+G+VE+VVCRDD+G + AFHNVCRHHAS+LA GSGKKS FVCPYHGWTYG +G L
Sbjct: 107 YFTGRLGDVEYVVCRDDSGIVRAFHNVCRHHASLLAYGSGKKSCFVCPYHGWTYGFNGAL 166
Query: 131 LKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE 190
LKATRI+G+++FNV +FGL+P++VATWGPFVLLN+ KE + ++EVDS+ V+ EWLG SSE
Sbjct: 167 LKATRISGMRNFNVNDFGLLPMKVATWGPFVLLNLEKENLSKKEVDSHNVSKEWLGSSSE 226
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
ILS NG+DSSLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL+LDSYS +++
Sbjct: 227 ILSTNGVDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLDSYSITMF 286
Query: 251 EKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
E+VSIQ CE S + + RLG KAIYAF+YPNFMINRYGPWMDTNLV+PL P +C+V+
Sbjct: 287 ERVSIQSCEGSSEKNKGNYDRLGRKAIYAFVYPNFMINRYGPWMDTNLVVPLGPNKCQVI 346
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
FDY+L+ SLKDDK FIE+SL+DSE+VQ+EDI+LCEGVQ+GL+SPAY GRYAP+VEQ M+
Sbjct: 347 FDYYLEHSLKDDKDFIEKSLQDSEKVQIEDIVLCEGVQKGLQSPAYRVGRYAPTVEQAMH 406
Query: 371 HFHSLLHCNLT 381
HFH LL+ NL
Sbjct: 407 HFHCLLYENLA 417
>gi|388501558|gb|AFK38845.1| unknown [Medicago truncatula]
Length = 411
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 269/377 (71%), Positives = 324/377 (85%), Gaps = 3/377 (0%)
Query: 5 SCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQ 64
S S ++V +QKL +FNP IPIEKA+TPPSSWY DPSFL LEL RVFYR WQ VG +Q
Sbjct: 37 SLSSSDMVVSQKLAQQFNPNIPIEKAVTPPSSWYIDPSFLHLELDRVFYRGWQAVGSMEQ 96
Query: 65 LKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTY 124
+K+P +FF+GR+G+VEFVVCRDD+G + AF+NVCRHHASILA+GSG+KS FVCPYHGWTY
Sbjct: 97 IKNPGEFFTGRLGDVEFVVCRDDSGNVRAFYNVCRHHASILASGSGQKSCFVCPYHGWTY 156
Query: 125 GLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW 184
GL+G LLKATRI+G++DFNV +FGL+P++VATWGPFVLLN GKE +EEVD++ VA EW
Sbjct: 157 GLNGNLLKATRISGMRDFNVNDFGLIPIKVATWGPFVLLNFGKE---KEEVDNHNVAEEW 213
Query: 185 LGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
LG +E+LS NG+DSSLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHK LASGL LDS
Sbjct: 214 LGSCTELLSTNGVDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKDLASGLNLDS 273
Query: 245 YSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
YST L+E+VSIQ CE GS + ++ RLG KAIYAFIYPNFMINRYGPWMDTN V+PL P
Sbjct: 274 YSTKLFERVSIQSCEGGSEKSKENNDRLGRKAIYAFIYPNFMINRYGPWMDTNFVLPLGP 333
Query: 305 TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
++C+VVFD++L+ SL+ D+ FIE+SL+DSE+VQ+EDI+L EGVQ+GL+SPAY GRYAP
Sbjct: 334 SKCQVVFDHYLEPSLQGDRDFIEKSLQDSEKVQIEDIVLSEGVQKGLQSPAYFVGRYAPK 393
Query: 365 VEQTMYHFHSLLHCNLT 381
VEQ M+HFH L+ NLT
Sbjct: 394 VEQAMHHFHCFLYENLT 410
>gi|255554434|ref|XP_002518256.1| choline monooxygenase, putative [Ricinus communis]
gi|223542603|gb|EEF44142.1| choline monooxygenase, putative [Ricinus communis]
Length = 417
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 259/366 (70%), Positives = 313/366 (85%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV +F+P IP+E+A TPPSSWYTDPSF ELH VFY+ WQ VG+T Q+K P+DFF+G
Sbjct: 50 QNLVNKFDPHIPVEEAFTPPSSWYTDPSFYDYELHCVFYKGWQAVGFTKQIKSPRDFFTG 109
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G VEFVVCRDDNGK+HAFHNVCRHH S+LA+G G+KS FVCPYH WTYGLDG LLKAT
Sbjct: 110 RLGNVEFVVCRDDNGKVHAFHNVCRHHGSVLASGCGQKSCFVCPYHAWTYGLDGALLKAT 169
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
RITG+++F++ E+GL+P+ VA WGPFVLLN+ +E+ Q+EVD N+V NEWLG S +L
Sbjct: 170 RITGMQNFSLDEYGLLPINVAAWGPFVLLNVDRESSPQQEVDGNMVENEWLGSCSGLLKT 229
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
NG+DSSLSY+CRR Y IECNWKVFCDNYLDGGYHVP+AHK LASGL+LDSYST+++E+ S
Sbjct: 230 NGVDSSLSYVCRRTYNIECNWKVFCDNYLDGGYHVPFAHKSLASGLKLDSYSTTIFERAS 289
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQ+CE GS D+ RLGSKAIYAFI+PNFMINRYGPWMDTNLV+PL P++C+V+FDYF
Sbjct: 290 IQKCEGGSMGSVDEFDRLGSKAIYAFIFPNFMINRYGPWMDTNLVLPLGPSKCQVIFDYF 349
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ K+DK FI++SL DSE+VQMEDI+LCEGVQRGLESPAYC GRYAP+VE+ M+HFH
Sbjct: 350 VEADYKNDKTFIDRSLIDSERVQMEDIMLCEGVQRGLESPAYCRGRYAPTVEKAMHHFHQ 409
Query: 375 LLHCNL 380
LLH L
Sbjct: 410 LLHGKL 415
>gi|449476340|ref|XP_004154710.1| PREDICTED: LOW QUALITY PROTEIN: choline monooxygenase,
chloroplastic-like [Cucumis sativus]
Length = 417
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/371 (71%), Positives = 313/371 (84%)
Query: 11 LVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD 70
L+ A+KLV +F+PQIP+EKALTPPSSWY DPSF ALEL+ VFYR WQ VGY +QLKD D
Sbjct: 46 LIEARKLVDDFDPQIPLEKALTPPSSWYIDPSFXALELNHVFYRGWQAVGYVEQLKDAHD 105
Query: 71 FFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTL 130
FF+GR+G VE+VVC+D+N K+ AFHNVCRHHAS+LA+G GKKS FVCPYHGWTYGLDG L
Sbjct: 106 FFTGRLGNVEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGIL 165
Query: 131 LKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE 190
LKATRI GI++F+ +FGLVPL VATWGPFVLLN+ + + +VD N VA EWLG ++
Sbjct: 166 LKATRIDGIQNFDENDFGLVPLPVATWGPFVLLNLDGKLSSKPDVDENKVAREWLGTCAD 225
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
+L +NG+D+SLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS L+L+SYST L+
Sbjct: 226 VLRLNGVDASLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTELF 285
Query: 251 EKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
E VSIQ C+ G DD RLGS+A+YAF+YPNFMINRYGPWMDTNLV+PL P +C VV
Sbjct: 286 ETVSIQSCKGGGESKGDDYGRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCLVV 345
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
FDYFL+ S K+D +FI+ SL+DSE VQ EDIILCEGVQ+GLESPAY GRYAPSVE M+
Sbjct: 346 FDYFLEASFKNDDSFIQLSLEDSESVQNEDIILCEGVQKGLESPAYKFGRYAPSVENAMH 405
Query: 371 HFHSLLHCNLT 381
HFH LLHCNLT
Sbjct: 406 HFHRLLHCNLT 416
>gi|449442761|ref|XP_004139149.1| PREDICTED: choline monooxygenase, chloroplastic-like [Cucumis
sativus]
Length = 417
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/371 (71%), Positives = 313/371 (84%)
Query: 11 LVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD 70
L+ A+KLV +F+PQIP+EKALTPPSSWY DPSF ALEL+ VFYR WQ VGY +QLKD D
Sbjct: 46 LIEARKLVDDFDPQIPLEKALTPPSSWYIDPSFFALELNHVFYRGWQAVGYVEQLKDAHD 105
Query: 71 FFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTL 130
FF+GR+G VE+VVC+D+N K+ AFHNVCRHHAS+LA+G GKKS FVCPYHGWTYGLDG L
Sbjct: 106 FFTGRLGNVEYVVCKDNNRKVRAFHNVCRHHASLLASGCGKKSCFVCPYHGWTYGLDGIL 165
Query: 131 LKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE 190
LKATRI GI++F+ +FGLVPL VATWGPFVLLN+ + + +VD + VA EWLG ++
Sbjct: 166 LKATRIDGIQNFDENDFGLVPLPVATWGPFVLLNLDGKLSSKPDVDEDKVAREWLGTCAD 225
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
+L +NG+D+SLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS L+L+SYST L+
Sbjct: 226 VLRLNGVDASLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASNLKLESYSTELF 285
Query: 251 EKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
E VSIQ C+ G DD RLGS+A+YAF+YPNFMINRYGPWMDTNLV+PL P +C VV
Sbjct: 286 ETVSIQSCKGGGESKGDDIGRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCLVV 345
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
FDYFL+ S K+D +FI+ SL+DSE VQ EDIILCEGVQ+GLESPAY GRYAPSVE M+
Sbjct: 346 FDYFLEASFKNDDSFIQLSLEDSESVQNEDIILCEGVQKGLESPAYKFGRYAPSVENAMH 405
Query: 371 HFHSLLHCNLT 381
HFH LLHCNLT
Sbjct: 406 HFHRLLHCNLT 416
>gi|357479485|ref|XP_003610028.1| Choline monooxygenase [Medicago truncatula]
gi|355511083|gb|AES92225.1| Choline monooxygenase [Medicago truncatula]
Length = 429
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/395 (68%), Positives = 325/395 (82%), Gaps = 21/395 (5%)
Query: 5 SCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQ 64
S S ++V +QKL +FNP IPIEKA+TPPSSWY DPSF LEL RVFYR WQ VG +Q
Sbjct: 37 SLSSSDMVVSQKLAQQFNPNIPIEKAVTPPSSWYIDPSFFHLELDRVFYRGWQAVGSMEQ 96
Query: 65 LKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTY 124
+K+P +FF+GR+G+VEFVVCRDD+G + AF+NVCRHHASILA+GSG+KS FVCPYHGWTY
Sbjct: 97 IKNPGEFFTGRLGDVEFVVCRDDSGNVRAFYNVCRHHASILASGSGQKSCFVCPYHGWTY 156
Query: 125 GLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW 184
GL+G LLKATRI+G++DFNV +FGL+P++VATWGPFVLLN GKE +EEVD++ VA EW
Sbjct: 157 GLNGNLLKATRISGMRDFNVNDFGLIPIKVATWGPFVLLNFGKE---KEEVDNHNVAEEW 213
Query: 185 LGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
LG +E+LS NG+DSSLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHK LASGL LDS
Sbjct: 214 LGSCTELLSTNGVDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKDLASGLNLDS 273
Query: 245 YSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMIN---------------- 288
YST L+E+VSIQ CE GS + ++ RLG KAIYAFIYPNFMIN
Sbjct: 274 YSTKLFERVSIQSCEGGSEKSKENNDRLGRKAIYAFIYPNFMINSCFANQHAFINSGACW 333
Query: 289 --RYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEG 346
RYGPWMDTNLV+PL P++C+VVFDY+L+ SL+ D+ FIE+SL+DSE+VQ+EDI+L EG
Sbjct: 334 SDRYGPWMDTNLVLPLGPSKCQVVFDYYLEPSLQGDRDFIEKSLQDSEKVQIEDIVLSEG 393
Query: 347 VQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
VQ+GL+SPAY GRYAP VEQ M+HFH LL+ NLT
Sbjct: 394 VQKGLQSPAYSVGRYAPKVEQAMHHFHCLLYENLT 428
>gi|398560057|gb|AFO85434.1| choline monooxygenase [Eucalyptus grandis]
Length = 439
Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/380 (70%), Positives = 317/380 (83%), Gaps = 16/380 (4%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
+ LV +F+P++PIE+ALTPPSSWYTDPSFL LEL RVFYR WQ VG TDQ+K PQDFF+G
Sbjct: 60 ESLVDDFDPELPIEEALTPPSSWYTDPSFLDLELDRVFYRGWQAVGCTDQVKSPQDFFTG 119
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G VEFVVCRDDNGKI AFHNVCRHHAS+LA+GSGKKS FVCPYHGWTY L+G LL+AT
Sbjct: 120 RLGNVEFVVCRDDNGKIRAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYALNGALLRAT 179
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
R+ GI++F+ EFGL+PL+VATWGPFVLLN K+ +EV+S++ A EW G +IL
Sbjct: 180 RVHGIRNFD--EFGLIPLKVATWGPFVLLNFEKDVSPDQEVESDIAAKEWTGSCVDILGN 237
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
N ID SL+YLCRREY +ECNWKVFCDNYLDGGYHVPYAHKGLASGL+LDSYST+++EKVS
Sbjct: 238 NCIDPSLTYLCRREYILECNWKVFCDNYLDGGYHVPYAHKGLASGLKLDSYSTTIHEKVS 297
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMIN--------------RYGPWMDTNLVI 300
+Q CE GST +D RLG++A+YAFIYPNFMIN RYGPWMDTNLV+
Sbjct: 298 LQICEGGSTNNANDFDRLGAEALYAFIYPNFMINSLSDFSLTESLLLYRYGPWMDTNLVL 357
Query: 301 PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
PL P +C+V+FDYFL SLKDDK F+E+SL+DSE+VQMEDI+LCEG+Q+GLESPAYCSGR
Sbjct: 358 PLGPRKCRVIFDYFLKDSLKDDKNFVERSLQDSERVQMEDIVLCEGIQKGLESPAYCSGR 417
Query: 361 YAPSVEQTMYHFHSLLHCNL 380
YAP+VE MYHFH LL+ NL
Sbjct: 418 YAPTVEIAMYHFHGLLYRNL 437
>gi|237688244|gb|ACR15118.1| choline monooxygenase [Lycium barbarum]
Length = 427
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 269/382 (70%), Positives = 320/382 (83%), Gaps = 1/382 (0%)
Query: 2 SSSSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY 61
SSS YS N +KLV EF+P IPIE+A+TPPSSWYTD SF EL++VF++ WQVVGY
Sbjct: 46 SSSLDYSNNHNYTKKLVQEFDPNIPIEEAVTPPSSWYTDTSFYTHELNQVFFKGWQVVGY 105
Query: 62 TDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHG 121
++Q+K+P +F+GR+G VE+VVCRDD GKI+AFHNVCRHHA++LA+GSGK S FVCPYHG
Sbjct: 106 SEQIKEPSQYFTGRLGNVEYVVCRDDGGKIYAFHNVCRHHATLLASGSGKSSCFVCPYHG 165
Query: 122 WTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA 181
WTYGLDG LLKATRITGIK+F V E GLVP+ VA WGPF+LLN A+ +++ D ++V
Sbjct: 166 WTYGLDGALLKATRITGIKNFKVNEMGLVPMRVAVWGPFILLNFENGALSEQKSDFDLVG 225
Query: 182 NEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
NEWLG SS+IL+ G+DSSLS+LC REYT+ECNWKVFCDNYLDGGYHVPYAHK LASGL
Sbjct: 226 NEWLGSSSQILADGGVDSSLSFLCGREYTVECNWKVFCDNYLDGGYHVPYAHKDLASGLT 285
Query: 242 LDSYSTSLYEKVSIQRCESGSTEGTD-DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVI 300
LDSYST++ EKVSIQRCE+GS E D + RLGSKA+YAF+YPNFMINRYGPWMDTNLV+
Sbjct: 286 LDSYSTTILEKVSIQRCETGSAERDDQEFDRLGSKALYAFVYPNFMINRYGPWMDTNLVL 345
Query: 301 PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
P P +C V+FDYFLD SLK D++FI QSL+DSE VQ+EDI LCE VQRGLESPAY +GR
Sbjct: 346 PQGPRKCLVIFDYFLDASLKGDESFIAQSLQDSETVQIEDIKLCEAVQRGLESPAYRTGR 405
Query: 361 YAPSVEQTMYHFHSLLHCNLTN 382
YAP VE+ M+HFHSLL+ NL N
Sbjct: 406 YAPQVEKAMHHFHSLLYENLHN 427
>gi|353529376|gb|AER10510.1| choline monooxygenase [Pyrus betulifolia]
gi|353529378|gb|AER10511.1| choline monooxygenase [Pyrus betulifolia]
Length = 408
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/368 (71%), Positives = 309/368 (83%), Gaps = 7/368 (1%)
Query: 17 LVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
LV +F P IPIE+A TPPSSWYTDPSF +LEL +FYR WQ VGYT+Q+++ +FF+GR+
Sbjct: 44 LVGQFEPTIPIERAGTPPSSWYTDPSFYSLELDTLFYRGWQAVGYTEQIRNAGEFFTGRL 103
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYH---GWTYGLDGTLLKA 133
G VEFVVC+D +GK+ AFHNVCRHHA +LA GSG+KS FVCPYH GWTYG DG LLKA
Sbjct: 104 GNVEFVVCQDGDGKLQAFHNVCRHHAMLLAYGSGRKSCFVCPYHVRQGWTYGFDGALLKA 163
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
TRITGI++FN EFGLVPL+VATWGPF+LLNM + + D V NEWLG S+E+LS
Sbjct: 164 TRITGIQNFNEHEFGLVPLKVATWGPFILLNMEQNV----DSDPGSVQNEWLGSSAEVLS 219
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
NGID+SLS++CRR+Y IECNWKVFCDNYLDGGYHVPYAHKGLASGL LD YST++YEKV
Sbjct: 220 NNGIDTSLSFVCRRDYVIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDGYSTTVYEKV 279
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
SIQ+CESGSTE +D RLGSKA+YAF+YPNFMINRYGPWMDTNLV+PL +C+V FDY
Sbjct: 280 SIQKCESGSTERKNDFDRLGSKALYAFVYPNFMINRYGPWMDTNLVLPLGQRKCQVRFDY 339
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
F++ SLKDD FIE+SLKDSE+VQMED++LCEGVQRGLESPAY GRYAP+VE M+HFH
Sbjct: 340 FIEASLKDDTDFIERSLKDSERVQMEDVMLCEGVQRGLESPAYNIGRYAPTVENAMHHFH 399
Query: 374 SLLHCNLT 381
LLH LT
Sbjct: 400 CLLHKGLT 407
>gi|218198825|gb|EEC81252.1| hypothetical protein OsI_24336 [Oryza sativa Indica Group]
Length = 410
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/380 (68%), Positives = 308/380 (81%), Gaps = 3/380 (0%)
Query: 2 SSSSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY 61
+S+S + AA++LV F+P +P+ A+TPPS WYTDP FL LEL RVF R WQ VG+
Sbjct: 31 ASASSVATPEPAARRLVAAFDPAVPLASAVTPPSGWYTDPDFLRLELDRVFLRGWQAVGH 90
Query: 62 TDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHG 121
Q+K+P D+F+GR+G VEFV+CRD NG++HAFHNVCRHHAS+LA GSG+K+ F CPYHG
Sbjct: 91 IWQVKNPNDYFTGRLGNVEFVICRDANGELHAFHNVCRHHASLLACGSGQKTCFQCPYHG 150
Query: 122 WTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA 181
WTYGLDG LLKATRI+GIK+FN +FGL+P++VATWGPFVL ++ +E N V
Sbjct: 151 WTYGLDGVLLKATRISGIKNFNKNDFGLIPIKVATWGPFVLAKF--DSGFSQETADNTVG 208
Query: 182 NEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
+EWLG +S++LS NGID+SL ++CRREY IECNWKVFCDNYLDGGYHVPYAH LASGLQ
Sbjct: 209 DEWLGSASDLLSRNGIDTSLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGTLASGLQ 268
Query: 242 LDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
L SY T YE+VS+QRCES E +D RLG+KAIYAF+YPNFMINRYGPWMDTNLV+P
Sbjct: 269 LQSYETHTYERVSVQRCESVQAE-QNDFDRLGTKAIYAFVYPNFMINRYGPWMDTNLVVP 327
Query: 302 LAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
L TRCKV+FDYFLD SL DD+ FIE SLKDSEQVQMEDI LCEGVQRGLESPAY GRY
Sbjct: 328 LDATRCKVIFDYFLDKSLMDDQNFIESSLKDSEQVQMEDIALCEGVQRGLESPAYSVGRY 387
Query: 362 APSVEQTMYHFHSLLHCNLT 381
APSVE M+HFH LLH NL+
Sbjct: 388 APSVEMAMHHFHCLLHANLS 407
>gi|357123586|ref|XP_003563491.1| PREDICTED: choline monooxygenase, chloroplastic-like [Brachypodium
distachyon]
Length = 409
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/367 (71%), Positives = 303/367 (82%), Gaps = 4/367 (1%)
Query: 14 AQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS 73
A++LV F+P IP+ A+TPPS WYTDP FL LEL RVF R WQ VG+ Q+K+P DFFS
Sbjct: 45 ARRLVAAFDPAIPLASAVTPPSEWYTDPEFLRLELDRVFLRGWQAVGHIGQVKNPNDFFS 104
Query: 74 GRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKA 133
GR+G VEFV+CRD +GK+HAFHNVCRHHAS+LA GSG+K+ F CPYHGWTYGLDG LLKA
Sbjct: 105 GRLGNVEFVICRDAHGKLHAFHNVCRHHASLLACGSGQKTCFQCPYHGWTYGLDGALLKA 164
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
TRI+GIK+FN +FGL+P++VATWGPFVL A Q+ VD +VV +EWLG +S++LS
Sbjct: 165 TRISGIKNFNKNDFGLLPIKVATWGPFVLARFDNFA--QDTVD-DVVGDEWLGSASDLLS 221
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
NGID+SL ++CRREY IECNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YE+V
Sbjct: 222 RNGIDTSLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGALASGLQLQSYETLTYERV 281
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
S+QRCES E +D RLG+KAIYAF+YPNFMINRYGPWMDTNL +PL TRCKVVFDY
Sbjct: 282 SVQRCESAPAE-QEDIDRLGTKAIYAFVYPNFMINRYGPWMDTNLAVPLDATRCKVVFDY 340
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
FLD SL DD+ FI+QSLKDSEQVQ+EDI LCEGVQ+GLESPAY GRYAPSVE M+HFH
Sbjct: 341 FLDESLLDDQDFIDQSLKDSEQVQIEDIALCEGVQKGLESPAYGVGRYAPSVEMAMHHFH 400
Query: 374 SLLHCNL 380
LLH NL
Sbjct: 401 RLLHTNL 407
>gi|297725227|ref|NP_001174977.1| Os06g0698785 [Oryza sativa Japonica Group]
gi|255677362|dbj|BAH93705.1| Os06g0698785 [Oryza sativa Japonica Group]
Length = 410
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/380 (68%), Positives = 308/380 (81%), Gaps = 3/380 (0%)
Query: 2 SSSSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY 61
+S+S + AA++LV F+P +P+ A+TPPS WYTDP FL LEL RVF R WQ VG+
Sbjct: 31 ASASSVAPPEPAARRLVAAFDPAVPLASAVTPPSGWYTDPDFLRLELDRVFLRGWQAVGH 90
Query: 62 TDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHG 121
Q+K+P D+F+GR+G VEFV+CRD NG++HAFHNVCRHHAS+LA GSG+K+ F CPYHG
Sbjct: 91 IWQVKNPNDYFTGRLGNVEFVICRDANGELHAFHNVCRHHASLLACGSGQKTCFQCPYHG 150
Query: 122 WTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA 181
WTYGLDG LLKAT+I+GIK+FN +FGL+P++VATWGPFVL ++ +E N V
Sbjct: 151 WTYGLDGVLLKATQISGIKNFNKNDFGLIPIKVATWGPFVLAKF--DSGFSQETADNTVG 208
Query: 182 NEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
+EWLG +S++LS NGID+SL ++CRREY IECNWKVFCDNYLDGGYHVPYAH LASGLQ
Sbjct: 209 DEWLGSASDLLSRNGIDTSLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGTLASGLQ 268
Query: 242 LDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
L SY T YE+VS+QRCES E +D RLG+KAIYAF+YPNFMINRYGPWMDTNLV+P
Sbjct: 269 LQSYETHTYERVSVQRCESVQAE-QNDFDRLGTKAIYAFVYPNFMINRYGPWMDTNLVVP 327
Query: 302 LAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
L TRCKV+FDYFLD SL DD+ FIE SLKDSEQVQMEDI LCEGVQRGLESPAY GRY
Sbjct: 328 LDATRCKVIFDYFLDKSLMDDQNFIESSLKDSEQVQMEDIALCEGVQRGLESPAYSVGRY 387
Query: 362 APSVEQTMYHFHSLLHCNLT 381
APSVE M+HFH LLH NL+
Sbjct: 388 APSVEMAMHHFHCLLHANLS 407
>gi|33300598|emb|CAE17671.1| choline monooxygenase [Oryza sativa Japonica Group]
Length = 410
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 259/380 (68%), Positives = 307/380 (80%), Gaps = 3/380 (0%)
Query: 2 SSSSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY 61
+S+S + AA++LV F+P +P+ A+TPPS WYTDP FL LEL RVF R WQ VG+
Sbjct: 31 ASASSVAPPEPAARRLVAAFDPAVPLASAVTPPSGWYTDPDFLRLELDRVFLRGWQAVGH 90
Query: 62 TDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHG 121
Q+K+P D+F+GR+G VEFV+CRD NG++HAFHNVCRHHAS+LA GSG+K+ F CPYHG
Sbjct: 91 IWQVKNPNDYFTGRLGNVEFVICRDANGELHAFHNVCRHHASLLACGSGQKTCFQCPYHG 150
Query: 122 WTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA 181
WTYGLDG LLKA +I+GIK+FN +FGL+P++VATWGPFVL ++ +E N V
Sbjct: 151 WTYGLDGVLLKAAQISGIKNFNKNDFGLIPIKVATWGPFVLAKF--DSGFSQETADNTVG 208
Query: 182 NEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
+EWLG +S++LS NGID+SL ++CRREY IECNWKVFCDNYLDGGYHVPYAH LASGLQ
Sbjct: 209 DEWLGSASDLLSRNGIDTSLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGTLASGLQ 268
Query: 242 LDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
L SY T YE+VS+QRCES E +D RLG+KAIYAF+YPNFMINRYGPWMDTNLV+P
Sbjct: 269 LQSYETHTYERVSVQRCESVQAE-QNDFDRLGTKAIYAFVYPNFMINRYGPWMDTNLVVP 327
Query: 302 LAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
L TRCKV+FDYFLD SL DD+ FIE SLKDSEQVQMEDI LCEGVQRGLESPAY GRY
Sbjct: 328 LDATRCKVIFDYFLDKSLMDDQNFIESSLKDSEQVQMEDIALCEGVQRGLESPAYSVGRY 387
Query: 362 APSVEQTMYHFHSLLHCNLT 381
APSVE M+HFH LLH NL+
Sbjct: 388 APSVEMAMHHFHCLLHANLS 407
>gi|194703924|gb|ACF86046.1| unknown [Zea mays]
gi|413943240|gb|AFW75889.1| CMO protein [Zea mays]
Length = 409
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 255/367 (69%), Positives = 301/367 (82%), Gaps = 3/367 (0%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++LV EF+P +P++ A+TPPS WYTDP FL LE+ VF+R WQ VG+ Q+K+P DFF+G
Sbjct: 44 RRLVAEFDPAVPLDSAVTPPSGWYTDPDFLQLEIDSVFFRGWQAVGHIWQVKNPNDFFTG 103
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G VEFVVCRD NGK+HAFHNVCRHHAS+LA GSG K+ F CPYHGWTYGLDGTLLKAT
Sbjct: 104 RLGNVEFVVCRDANGKLHAFHNVCRHHASLLACGSGHKTCFQCPYHGWTYGLDGTLLKAT 163
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
RI+GIK+FN +FGL+P++VATWGPFVL+ E+ D+ V NEWLG +S++L
Sbjct: 164 RISGIKNFNKNDFGLIPIKVATWGPFVLIRFDDESTEDNVYDT--VGNEWLGSASDLLGT 221
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
NGID+SL ++CRREY I CNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YE+VS
Sbjct: 222 NGIDTSLPHICRREYIINCNWKVFCDNYLDGGYHVPYAHGDLASGLQLQSYETLTYERVS 281
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+QRCES E DD RLG+KA+YAF+YPNFMINRYGPWMDTNL +PL TRCKVVFDYF
Sbjct: 282 VQRCESAPAE-PDDFDRLGTKALYAFVYPNFMINRYGPWMDTNLAVPLDSTRCKVVFDYF 340
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
LD SL DD+ FI++SL+DSEQVQ+EDI LCEGVQRGLESPAY GRYAPSVE M+HFH
Sbjct: 341 LDKSLLDDQCFIKKSLEDSEQVQIEDIALCEGVQRGLESPAYSVGRYAPSVEMAMHHFHR 400
Query: 375 LLHCNLT 381
L+H NL+
Sbjct: 401 LMHANLS 407
>gi|162459419|ref|NP_001105926.1| CMO protein [Zea mays]
gi|112790161|gb|ABI21840.1| CMO protein [Zea mays]
Length = 408
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 255/367 (69%), Positives = 301/367 (82%), Gaps = 3/367 (0%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++LV EF+P +P++ A+TPPS WYTDP FL LE+ VF+R WQ VG+ Q+K+P DFF+G
Sbjct: 43 RRLVAEFDPAVPLDSAVTPPSGWYTDPDFLQLEIDSVFFRGWQAVGHIWQVKNPNDFFTG 102
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G VEFVVCRD NGK+HAFHNVCRHHAS+LA GSG K+ F CPYHGWTYGLDGTLLKAT
Sbjct: 103 RLGNVEFVVCRDANGKLHAFHNVCRHHASLLACGSGHKTCFQCPYHGWTYGLDGTLLKAT 162
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
RI+GIK+FN +FGL+P++VATWGPFVL+ E+ D+ V NEWLG +S++L
Sbjct: 163 RISGIKNFNKNDFGLIPIKVATWGPFVLIRFDDESTEDNVYDT--VGNEWLGSASDLLGT 220
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
NGID+SL ++CRREY I CNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YE+VS
Sbjct: 221 NGIDTSLPHICRREYIINCNWKVFCDNYLDGGYHVPYAHGDLASGLQLQSYETLTYERVS 280
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+QRCES E DD RLG+KA+YAF+YPNFMINRYGPWMDTNL +PL TRCKVVFDYF
Sbjct: 281 VQRCESAPAE-PDDFDRLGTKALYAFVYPNFMINRYGPWMDTNLAVPLDSTRCKVVFDYF 339
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
LD SL DD+ FI++SL+DSEQVQ+EDI LCEGVQRGLESPAY GRYAPSVE M+HFH
Sbjct: 340 LDKSLLDDQCFIKKSLEDSEQVQIEDIALCEGVQRGLESPAYSVGRYAPSVEMAMHHFHR 399
Query: 375 LLHCNLT 381
L+H NL+
Sbjct: 400 LMHANLS 406
>gi|242094070|ref|XP_002437525.1| hypothetical protein SORBIDRAFT_10g028700 [Sorghum bicolor]
gi|241915748|gb|EER88892.1| hypothetical protein SORBIDRAFT_10g028700 [Sorghum bicolor]
Length = 405
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 252/367 (68%), Positives = 301/367 (82%), Gaps = 3/367 (0%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++LV EF+P +P++ A+TPPS WYTDP FL EL RVF+R WQ VG+ Q+K+P DFF+G
Sbjct: 41 RRLVAEFDPAVPLDSAITPPSGWYTDPGFLQHELDRVFHRGWQAVGHIWQVKNPNDFFTG 100
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G VEFV+CRD +GK+HAFHNVCRHHAS+LA GSG+K+ F CPYHGWTYGLDGTLLKAT
Sbjct: 101 RLGNVEFVICRDADGKLHAFHNVCRHHASLLACGSGQKTCFQCPYHGWTYGLDGTLLKAT 160
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
RI+GI++FN +FGL+P++V TWGPFVL+ E+ D+ V NEWLG +S++L
Sbjct: 161 RISGIRNFNKNDFGLIPIKVVTWGPFVLVRFDDESTEDNVYDA--VGNEWLGSASDLLGT 218
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
NGID+SL ++CRREY I CNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YE+VS
Sbjct: 219 NGIDTSLPHICRREYIINCNWKVFCDNYLDGGYHVPYAHGALASGLQLQSYETLTYERVS 278
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+QRCES E DD RLG+KA+YAF+YPNFMINRYGPWMDTNL +PL T CKVVFDYF
Sbjct: 279 VQRCESAPAE-PDDFDRLGTKALYAFVYPNFMINRYGPWMDTNLAVPLDSTSCKVVFDYF 337
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
LD SL DD++FI++SLKDSEQVQ+EDI LCEGVQRGLESPAY GRYAPSVE M+HFH
Sbjct: 338 LDKSLLDDESFIKKSLKDSEQVQIEDIALCEGVQRGLESPAYSVGRYAPSVEMAMHHFHC 397
Query: 375 LLHCNLT 381
L+H NL+
Sbjct: 398 LIHGNLS 404
>gi|209446900|dbj|BAG74777.1| choline monooxygenase [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/368 (68%), Positives = 298/368 (80%), Gaps = 4/368 (1%)
Query: 14 AQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS 73
A++L EF+P +P+ A+TPPS WYTDP FL LEL RVF R WQ VG+ Q+K+P DFF+
Sbjct: 42 ARRLAAEFDPAVPLASAVTPPSGWYTDPGFLRLELDRVFLRGWQAVGHIGQVKNPNDFFT 101
Query: 74 GRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKA 133
G +G VEFV+CRD NGK+ AFHNVCRHHAS+LA GSG+K+ F CPYHGWTYGLDGTLLKA
Sbjct: 102 GSLGNVEFVICRDANGKLQAFHNVCRHHASLLACGSGQKTCFQCPYHGWTYGLDGTLLKA 161
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
TRI+GIK+FN +FGL+P++VATWGPFVL + ++ +VV +EWLG +S++LS
Sbjct: 162 TRISGIKNFNKNDFGLLPIKVATWGPFVLARFDDSS---QDTVHDVVGDEWLGSASDLLS 218
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+GI++SL ++CRREY IECNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YEKV
Sbjct: 219 RSGINTSLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGALASGLQLQSYETLTYEKV 278
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
S+QRCES E +D RLG+KA YAF+YPNFMINRYGPWMDTNL +PL TRCKVVFDY
Sbjct: 279 SVQRCESAPAE-QEDIDRLGTKATYAFVYPNFMINRYGPWMDTNLAVPLDATRCKVVFDY 337
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
FLD SL DD+ FI +SLKDSEQVQ+EDI LCEGVQRGL SPAY GRYAPSVE M+HFH
Sbjct: 338 FLDKSLLDDQDFINRSLKDSEQVQIEDIALCEGVQRGLASPAYGVGRYAPSVEMAMHHFH 397
Query: 374 SLLHCNLT 381
LLH NL+
Sbjct: 398 CLLHANLS 405
>gi|297803044|ref|XP_002869406.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315242|gb|EFH45665.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 422
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 254/367 (69%), Positives = 306/367 (83%), Gaps = 2/367 (0%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
KLV EF+P+IP+E+A TPPSSWYTDP F + EL RVFY WQ VGY+DQ+K+ +DFF+G
Sbjct: 55 NKLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTG 114
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G+VE+VVCRDDNGKIHAFHNVC HHASILA+G+GKKS FVCPYHGWTY L G+L+KAT
Sbjct: 115 RLGDVEYVVCRDDNGKIHAFHNVCSHHASILASGNGKKSCFVCPYHGWTYSLSGSLVKAT 174
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN-VVANEWLGGSSEILS 193
R+TGI++F + E GL PL+VA WG FVLL + + EV+++ +VA+EWLG S LS
Sbjct: 175 RMTGIENFALNEMGLKPLKVAVWGHFVLLKVTQATSRDGEVETDGLVASEWLGTSVGRLS 234
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
G+DS LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL SGL L++YST+++EKV
Sbjct: 235 QGGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKV 294
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
SIQ C GS G D RLGS+A+YAF+YPNFMINRYGPWMDTNLV PL P +CKVVFDY
Sbjct: 295 SIQECGGGSKVGEDGFDRLGSQALYAFVYPNFMINRYGPWMDTNLVRPLGPRKCKVVFDY 354
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
FLD SLKDD+AFI++SL++S++VQMED++LCE VQRGLES AY GRYA VE+ M+HFH
Sbjct: 355 FLDPSLKDDEAFIKRSLEESDRVQMEDVVLCESVQRGLESQAYDKGRYA-LVEKPMHHFH 413
Query: 374 SLLHCNL 380
LLH NL
Sbjct: 414 CLLHHNL 420
>gi|30688478|ref|NP_194718.2| choline monooxygenase [Arabidopsis thaliana]
gi|20138061|sp|Q9SZR0.2|CHMO_ARATH RecName: Full=Choline monooxygenase, chloroplastic; Flags:
Precursor
gi|114050629|gb|ABI49464.1| At4g29890 [Arabidopsis thaliana]
gi|332660289|gb|AEE85689.1| choline monooxygenase [Arabidopsis thaliana]
Length = 422
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 251/366 (68%), Positives = 307/366 (83%), Gaps = 2/366 (0%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
KLV EF+P+IP+E+A TPPSSWYTDP F + EL RVFY WQ VGY+DQ+K+ +DFF+GR
Sbjct: 56 KLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTGR 115
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+G+V+FVVCRD+NGKIHAFHNVC HHASILA+G+G+KS FVC YHGWTY L G+L+KATR
Sbjct: 116 LGDVDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVKATR 175
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN-VVANEWLGGSSEILSI 194
++GI++F++ E GL PL VA WGPFVLL + + EV+++ +VA+EWLG S LS
Sbjct: 176 MSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELVASEWLGTSVGRLSQ 235
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
G+DS LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL SGL L++YST+++EKVS
Sbjct: 236 GGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKVS 295
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQ C GS G D RLGS+A+YAF+YPNFMINRYGPWMDTNLV+PL P +CKVVFDYF
Sbjct: 296 IQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKVVFDYF 355
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
LD SLKDD+AFI++SL++S++VQMED++LCE VQRGLES AY GRYA VE+ M+HFH
Sbjct: 356 LDPSLKDDEAFIKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHC 414
Query: 375 LLHCNL 380
LLH NL
Sbjct: 415 LLHHNL 420
>gi|23978945|dbj|BAC21260.1| choline monooxygenase [Arabidopsis thaliana]
Length = 422
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 250/366 (68%), Positives = 307/366 (83%), Gaps = 2/366 (0%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
KLV EF+P+IP+E+A TPPSSWYTDP F + EL RVFY WQ VGY+DQ+K+ +DFF+GR
Sbjct: 56 KLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTGR 115
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+G+V+FVVCRD+NGKIHAFHNVC HHASILA+G+G+KS FVC YHGWTY L G+L+KATR
Sbjct: 116 LGDVDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVKATR 175
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN-VVANEWLGGSSEILSI 194
++GI++F++ E GL PL VA WGPFVLL + + EV+++ +VA+EWLG S LS
Sbjct: 176 MSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELVASEWLGTSVGRLSQ 235
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
G+DS LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL SGL L++YST+++EKVS
Sbjct: 236 GGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKVS 295
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQ C GS G D RLGS+A+YAF+YPNFMINRYGPWMDTNLV+PL P +CKVVFDYF
Sbjct: 296 IQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKVVFDYF 355
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
LD SLKDD+AF+++SL++S++VQMED++LCE VQRGLES AY GRYA VE+ M+HFH
Sbjct: 356 LDPSLKDDEAFVKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHC 414
Query: 375 LLHCNL 380
LLH NL
Sbjct: 415 LLHHNL 420
>gi|293633743|gb|ADE60257.1| choline monooxygenase [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/367 (67%), Positives = 294/367 (80%), Gaps = 4/367 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++L EF+P +P+ A+TPPS WYTDP FL LEL RVF R WQ VG+ Q+K+P DFF+G
Sbjct: 43 RRLAAEFDPAVPLASAVTPPSGWYTDPGFLRLELDRVFLRGWQAVGHIGQVKNPNDFFTG 102
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VEFVVCRD +GK+ AFHNVCRH AS+LA GSG+K+ F CPYHGWTYGLDGTLLKAT
Sbjct: 103 SLGNVEFVVCRDASGKLQAFHNVCRHQASLLACGSGQKTCFQCPYHGWTYGLDGTLLKAT 162
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
RI+GIK+FN +FGL+P++VATWGPFVL + ++ +VV +EWLG +S++LS
Sbjct: 163 RISGIKNFNKNDFGLLPIKVATWGPFVLARFDDSS---QDTVHDVVGDEWLGSASDLLSR 219
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+GI++SL ++CRREY IECNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YEKVS
Sbjct: 220 SGINTSLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGALASGLQLQSYETLTYEKVS 279
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+QRCES E +D RLG+KA YAF+YPNFMINRYGPW+DTNL +PL TRCKVVFDYF
Sbjct: 280 VQRCESAPAE-QEDIDRLGTKATYAFVYPNFMINRYGPWVDTNLAVPLDGTRCKVVFDYF 338
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
LD SL DD+ FI +SLKDSEQVQ+EDI LCEGVQRGL SPAY GRYAPSVE M HFH
Sbjct: 339 LDESLLDDQDFINRSLKDSEQVQIEDIALCEGVQRGLASPAYGVGRYAPSVEMAMRHFHC 398
Query: 375 LLHCNLT 381
LLH L+
Sbjct: 399 LLHAKLS 405
>gi|157688316|gb|ABV64740.1| choline monooxygenase [Leymus chinensis]
Length = 342
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/345 (69%), Positives = 283/345 (82%), Gaps = 4/345 (1%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
WYTDP FL LEL RVF WQ VG+ Q+K+P DFF+G +G V+FV+CRD NGK+ A HN
Sbjct: 1 WYTDPEFLRLELDRVFLCGWQAVGHIGQVKNPNDFFTGSLGNVQFVICRDGNGKLQALHN 60
Query: 97 VCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
VCRHHAS+LA GSG+K+ F CPYHGWTYGLDGTLLKATRI+GIK+FN +FGL+P++VAT
Sbjct: 61 VCRHHASLLACGSGQKTCFQCPYHGWTYGLDGTLLKATRISGIKNFNKNDFGLLPIKVAT 120
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWK 216
WGPFVL + Q+ VD +VV +EWLG +S++LS +GI++SL ++CRREY IECNWK
Sbjct: 121 WGPFVLARFDDSS--QDTVD-DVVGDEWLGSASDLLSRSGINTSLPHICRREYIIECNWK 177
Query: 217 VFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKA 276
VFCDNYLDGGYHVPYAH LASGLQL SY T YE+VS+QRCES E +D RLG+KA
Sbjct: 178 VFCDNYLDGGYHVPYAHGALASGLQLQSYETLTYERVSVQRCESAPAE-QEDIDRLGTKA 236
Query: 277 IYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQV 336
YAF+YPNFMINRYGPWMDTNL +PL TRCKV+FDYFLD SL DD+ FI++SLKDSEQV
Sbjct: 237 TYAFVYPNFMINRYGPWMDTNLAVPLDATRCKVIFDYFLDESLLDDEGFIDRSLKDSEQV 296
Query: 337 QMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
Q+EDI LCEGVQRGLESPAY GRYAPSVE M+HFH LLH NL+
Sbjct: 297 QIEDIALCEGVQRGLESPAYGVGRYAPSVEMAMHHFHCLLHANLS 341
>gi|7484869|pir||T08550 choline monooxygenase (EC 1.1.3.-) precursor - Arabidopsis thaliana
gi|4914413|emb|CAB43664.1| choline monooxygenase-like protein [Arabidopsis thaliana]
gi|7269888|emb|CAB79747.1| choline monooxygenase-like protein [Arabidopsis thaliana]
Length = 426
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/380 (64%), Positives = 297/380 (78%), Gaps = 26/380 (6%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
KLV EF+P+IP+E+A TPPSSWYTDP F + EL RVFY WQ VGY+DQ+K+ +DFF+GR
Sbjct: 56 KLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTGR 115
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
D+NGKIHAFHNVC HHASILA+G+G+KS FVC YHGWTY L G+L+KATR
Sbjct: 116 ----------DENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVKATR 165
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN-VVANEWLGGSSEILSI 194
++GI++F++ E GL PL VA WGPFVLL + + EV+++ +VA+EWLG S LS
Sbjct: 166 MSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELVASEWLGTSVGRLSQ 225
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSL----- 249
G+DS LSY+CRREYTI+CNWKVFCDNYLDGGYHVPYAHKGL SGL L++YST+L
Sbjct: 226 GGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTLVASCD 285
Query: 250 ---------YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVI 300
+EKVSIQ C GS G D RLGS+A+YAF+YPNFMINRYGPWMDTNLV+
Sbjct: 286 ELYGLRYQIFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVL 345
Query: 301 PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
PL P +CKVVFDYFLD SLKDD+AFI++SL++S++VQMED++LCE VQRGLES AY GR
Sbjct: 346 PLGPRKCKVVFDYFLDPSLKDDEAFIKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGR 405
Query: 361 YAPSVEQTMYHFHSLLHCNL 380
YA VE+ M+HFH LLH NL
Sbjct: 406 YA-LVEKPMHHFHCLLHHNL 424
>gi|125598381|gb|EAZ38161.1| hypothetical protein OsJ_22513 [Oryza sativa Japonica Group]
Length = 333
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/302 (72%), Positives = 252/302 (83%), Gaps = 3/302 (0%)
Query: 80 EFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI 139
EFV+CRD NG++HAFHNVCRHHAS+LA GSG+K+ F CPYHGWTYGLDG LLKAT+I+GI
Sbjct: 32 EFVICRDANGELHAFHNVCRHHASLLACGSGQKTCFQCPYHGWTYGLDGVLLKATQISGI 91
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
K+FN +FGL+P++VATWGPFVL ++ +E N V +EWLG +S++LS NGID+
Sbjct: 92 KNFNKNDFGLIPIKVATWGPFVLAKF--DSGFSQETADNTVGDEWLGSASDLLSRNGIDT 149
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
SL ++CRREY IECNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YE+VS+QRCE
Sbjct: 150 SLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGTLASGLQLQSYETHTYERVSVQRCE 209
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
S E +D RLG+KAIYAF+YPNFMINRYGPWMDTNLV+PL TRCKV+FDYFLD SL
Sbjct: 210 SVQAE-QNDFDRLGTKAIYAFVYPNFMINRYGPWMDTNLVVPLDATRCKVIFDYFLDKSL 268
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCN 379
DD+ FIE SLKDSEQVQMEDI LCEGVQRGLESPAY GRYAPSVE M+HFH LLH N
Sbjct: 269 MDDQNFIESSLKDSEQVQMEDIALCEGVQRGLESPAYSVGRYAPSVEMAMHHFHCLLHAN 328
Query: 380 LT 381
L+
Sbjct: 329 LS 330
>gi|302798579|ref|XP_002981049.1| hypothetical protein SELMODRAFT_114039 [Selaginella moellendorffii]
gi|300151103|gb|EFJ17750.1| hypothetical protein SELMODRAFT_114039 [Selaginella moellendorffii]
Length = 410
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 273/363 (75%), Gaps = 10/363 (2%)
Query: 18 VYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG 77
V +F+ P+E++LT PSSWY S +LE+ +F R W GY +QL++P+ FF+G +G
Sbjct: 45 VAQFDGGKPVEESLTAPSSWYWSSSLASLEMECIFGRGWHAAGYVEQLENPRQFFTGSLG 104
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRIT 137
V +VVCRD+ G++HAFHNVCRHHA+ +A+GSG F CPYHGWTYGLDG LLKATRIT
Sbjct: 105 RVRYVVCRDEQGQLHAFHNVCRHHAAPVASGSGCTPSFSCPYHGWTYGLDGNLLKATRIT 164
Query: 138 GIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI 197
GIK+FN +E GLVP++VA WGPFVL+N+ +A + +VA EWLG SS++L GI
Sbjct: 165 GIKNFNPRESGLVPIQVAAWGPFVLINLDAQA------NQELVAVEWLGSSSDLLVAAGI 218
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQR 257
D SL ++ RR+Y I+CNWKV+CDNYLDGGYHVP+AH GLA GL L SY T LYE VSIQ
Sbjct: 219 DRSLRHVARRDYVIDCNWKVYCDNYLDGGYHVPFAHPGLAKGLDLASYKTVLYETVSIQS 278
Query: 258 CESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
C S +T RLG +A YAF+YPNFMINRYGPWMDTNLV+P+AP +C+VVFDY+L+
Sbjct: 279 CRSKNT----GEERLGERATYAFVYPNFMINRYGPWMDTNLVLPIAPNKCQVVFDYYLEP 334
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
DK FI SL++S+QVQ ED+ LC+ VQ+GLES +Y +GRYAP VE+ M+HFH LH
Sbjct: 335 QFCQDKEFIASSLEESDQVQREDVTLCQSVQQGLESLSYDAGRYAPKVEEAMHHFHCRLH 394
Query: 378 CNL 380
+L
Sbjct: 395 NDL 397
>gi|302801538|ref|XP_002982525.1| hypothetical protein SELMODRAFT_116767 [Selaginella moellendorffii]
gi|300149624|gb|EFJ16278.1| hypothetical protein SELMODRAFT_116767 [Selaginella moellendorffii]
Length = 410
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 273/363 (75%), Gaps = 10/363 (2%)
Query: 18 VYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG 77
V +F+ P+E++LT PSSWY S +LE+ +F R W GY +QL++P+ FF+G +G
Sbjct: 45 VAQFDGGKPVEESLTAPSSWYWSSSLASLEMECIFGRGWHAAGYVEQLENPRQFFTGSLG 104
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRIT 137
V +VVCRD+ G++HAFHNVCRHHA+ +A+GSG F CPYHGWTYGLDG LLKATRIT
Sbjct: 105 RVRYVVCRDEQGQLHAFHNVCRHHAAPVASGSGCTPSFSCPYHGWTYGLDGNLLKATRIT 164
Query: 138 GIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI 197
GIK+FN +E GLVP++VA WGPFVL+N+ +A + +VA EWLG SS++L GI
Sbjct: 165 GIKNFNPRENGLVPIQVAAWGPFVLINLDAQA------NQELVAVEWLGSSSDLLVAAGI 218
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQR 257
D SL ++ RR+Y I+CNWKV+CDNYLDGGYHVP+AH GLA GL L SY T LYE VSIQ
Sbjct: 219 DRSLRHVARRDYVIDCNWKVYCDNYLDGGYHVPFAHPGLAKGLDLASYKTVLYETVSIQS 278
Query: 258 CESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
C S +T RLG +A YAF+YPNFMINRYGPWMDTNLV+P+AP +C+VVFDY+L+
Sbjct: 279 CRSKNT----GEERLGERATYAFVYPNFMINRYGPWMDTNLVLPIAPNKCQVVFDYYLEP 334
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
DK FI SL++S+QVQ ED+ LC+ VQ+GLES +Y +GRYAP VE+ M+HFH LH
Sbjct: 335 QFCQDKEFIASSLEESDQVQREDVTLCQSVQQGLESLSYDAGRYAPKVEEAMHHFHCRLH 394
Query: 378 CNL 380
+L
Sbjct: 395 NDL 397
>gi|167999765|ref|XP_001752587.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696118|gb|EDQ82458.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/367 (56%), Positives = 268/367 (73%), Gaps = 6/367 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++ + EF P+E+A TPPS+WYTD F E+ RVF R WQ VG+ Q+++P FF+G
Sbjct: 49 ERTLREFRRHAPVEEASTPPSAWYTDAEFADFEIDRVFGRCWQAVGHIKQMEEPGSFFTG 108
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G+ +VVC+D G+I AFHNVCRHHA+ +A+GSG FVCPYHGWTYGLDG L KA+
Sbjct: 109 RVGKTRYVVCKDGEGQIRAFHNVCRHHAAAVASGSGCTHSFVCPYHGWTYGLDGRLQKAS 168
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
R+ GI++F+ +E GLVP+ ATWGPFVL+++ + + D V WLG + LS
Sbjct: 169 RLAGIRNFSARENGLVPIRTATWGPFVLISLAESKASEASSD---VEEGWLGSAGPTLSS 225
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
GIDS++ ++ REY I+CNWKV+CDNYLDGGYHVP+AH LA+ L L SYSTSL E+VS
Sbjct: 226 AGIDSTMQHVATREYVIKCNWKVYCDNYLDGGYHVPHAHSSLAACLDLPSYSTSLLERVS 285
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQ C + G R+G+ A YAF+YPNFMINRYGPWMDTNLVIP++ + C+V+FD+F
Sbjct: 286 IQSCGAAKESGLV---RVGNVATYAFVYPNFMINRYGPWMDTNLVIPISMSECRVIFDWF 342
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
L+ SL DK FI+ S+ DSE VQ EDIILCE VQ GL SPAY GRYAP VEQ M+HFH
Sbjct: 343 LEPSLVHDKEFIDSSIADSEVVQKEDIILCEDVQNGLSSPAYDVGRYAPRVEQAMHHFHC 402
Query: 375 LLHCNLT 381
L++ +L+
Sbjct: 403 LIYDDLS 409
>gi|159885620|dbj|BAF93187.1| choline monooxygenase [Amaranthus tricolor]
gi|159885622|dbj|BAF93188.1| choline monooxygenase [Amaranthus tricolor]
Length = 442
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/381 (52%), Positives = 269/381 (70%), Gaps = 10/381 (2%)
Query: 4 SSCYSENLVAA----QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVV 59
SS S N+ +++++EF+P++P E TPPS+WYTDPS + EL R+FY+ WQV
Sbjct: 67 SSINSNNITTTTPNIKRIIHEFDPKVPAEDGFTPPSTWYTDPSLYSHELDRIFYKGWQVA 126
Query: 60 GYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPY 119
GY+DQ+K+P +F+G +G VE++VCRD GK+HAFHNVC H ASILA G+GKKS FVCPY
Sbjct: 127 GYSDQIKEPNQYFTGSLGNVEYLVCRDGQGKVHAFHNVCTHRASILACGTGKKSCFVCPY 186
Query: 120 HGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV 179
HGW +GLDG+L+KAT+ T + F+ +E GLV L+VA WGPFVL+++ + E
Sbjct: 187 HGWVFGLDGSLMKATK-TENQVFDPQELGLVTLKVAIWGPFVLISLDRSGSEGTE----D 241
Query: 180 VANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASG 239
V EW+G +E + + D SL ++ R E+ +E NWKVFCDNYLD YHVPYAHK A+
Sbjct: 242 VGKEWIGSCAEEVKKHAFDPSLQFINRSEFPMESNWKVFCDNYLDSAYHVPYAHKYYAAE 301
Query: 240 LQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLV 299
L D+Y T L EKV IQR S S + + RLGS+A YAFIYPNF + RYGPWM T +
Sbjct: 302 LDFDTYKTDLLEKVVIQRVASSSNK-PNGFDRLGSEAFYAFIYPNFAVERYGPWMTTMHI 360
Query: 300 IPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+PL P +CK+V DY+LD S+ +DK +IE+S+ ++ VQ ED++LCE VQRGLE+PAY SG
Sbjct: 361 VPLGPRKCKLVVDYYLDKSMMNDKPYIEKSIMINDNVQKEDVVLCESVQRGLETPAYRSG 420
Query: 360 RYAPSVEQTMYHFHSLLHCNL 380
RY +E+ ++HFH LH L
Sbjct: 421 RYVMPIEKGIHHFHCWLHQTL 441
>gi|20137880|sp|Q93XE1.1|CHMO_AMATR RecName: Full=Choline monooxygenase, chloroplastic; Flags:
Precursor
gi|15054919|gb|AAK82768.1|AF290974_1 choline monooxygenase [Amaranthus tricolor]
Length = 442
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/381 (52%), Positives = 267/381 (70%), Gaps = 10/381 (2%)
Query: 4 SSCYSENLVAA----QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVV 59
SS S N+ +++++EF+P++P E TPPS+WYTDPS + EL R+F + WQV
Sbjct: 67 SSINSNNITTTTPNIKRIIHEFDPKVPAEDGFTPPSTWYTDPSLYSHELDRIFSKGWQVA 126
Query: 60 GYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPY 119
GY+DQ+K+P +F+G +G VE++VCRD GK+HAFHNVC H ASILA G+GKKS FVCPY
Sbjct: 127 GYSDQIKEPNQYFTGSLGNVEYLVCRDGQGKVHAFHNVCTHRASILACGTGKKSCFVCPY 186
Query: 120 HGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV 179
HGW +GLDG+L+KAT+ T + F+ KE GLV L+VA WGPFVL+++ + E
Sbjct: 187 HGWVFGLDGSLMKATK-TENQVFDPKELGLVTLKVAIWGPFVLISLDRSGSEGTE----D 241
Query: 180 VANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASG 239
V EW+G +E + + D SL ++ R E+ +E NWKVFCDNYLD YHVPYAHK A+
Sbjct: 242 VGKEWIGSCAEEVKKHAFDPSLQFINRSEFPMESNWKVFCDNYLDSAYHVPYAHKYYAAE 301
Query: 240 LQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLV 299
L D+Y T L EKV IQR S S + + RLGS+A YAFIYPNF + RYGPWM T +
Sbjct: 302 LDFDTYKTDLLEKVVIQRVASSSNK-PNGFDRLGSEAFYAFIYPNFAVERYGPWMTTMHI 360
Query: 300 IPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
PL P +CK+V DY+L+ ++ +DK +IE+S+ ++ VQ ED++LCE VQRGLE+PAY SG
Sbjct: 361 GPLGPRKCKLVVDYYLENAMMNDKPYIEKSIMINDNVQKEDVVLCESVQRGLETPAYRSG 420
Query: 360 RYAPSVEQTMYHFHSLLHCNL 380
RY +E+ ++HFH LH L
Sbjct: 421 RYVMPIEKGIHHFHCWLHQTL 441
>gi|56463275|gb|AAV91779.1| choline monooxygenase [Salicornia europaea]
gi|444303775|gb|AGD99673.1| choline monooxygenase [Salicornia bigelovii]
Length = 442
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/362 (54%), Positives = 260/362 (71%), Gaps = 7/362 (1%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
+LV+EF+P+IP E ALTPPSSWYT+P+F + EL R+FY+ WQV G +DQ+K+ +F+GR
Sbjct: 84 QLVHEFDPKIPAEDALTPPSSWYTEPAFYSHELDRIFYKGWQVAGISDQIKEKNQYFTGR 143
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+G VE+VVCRD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW +GLDG L KAT+
Sbjct: 144 LGNVEYVVCRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVFGLDGDLTKATQ 203
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
T + F+ KE+GLVPL+VA WGPFVL+++ K E D EWLG S+E + +
Sbjct: 204 TTDAQTFDPKEYGLVPLKVAEWGPFVLISVDKNL---PETDP---GTEWLGSSAEDVKAH 257
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
D +L ++ R E+ +ECNWKVFCDNY+D YHVPYAHK A+ L D+Y T KV I
Sbjct: 258 AFDPNLQFIHRSEFPMECNWKVFCDNYVDSSYHVPYAHKYYATELDFDTYDTQTIGKVVI 317
Query: 256 QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL 315
QR +G++ D RLG++A YAF YPNF + RYGPWM T V P+A +CK+V DY++
Sbjct: 318 QRV-AGNSNKPDGFDRLGNQAFYAFAYPNFAVERYGPWMTTMHVHPIAQRKCKLVVDYYI 376
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
+ S+ DDK +I++ + ++ VQ ED +LCE VQ GLE+PAY SGRY +E+ ++HFH
Sbjct: 377 EKSMLDDKEYIDRGIAINDNVQREDKVLCESVQNGLETPAYRSGRYVMPIEKGIHHFHCW 436
Query: 376 LH 377
LH
Sbjct: 437 LH 438
>gi|20137675|sp|O04121.1|CHMO_SPIOL RecName: Full=Choline monooxygenase, chloroplastic; Flags:
Precursor
gi|1943945|gb|AAB52509.1| choline monooxygenase precursor [Spinacia oleracea]
Length = 439
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/366 (53%), Positives = 260/366 (71%), Gaps = 6/366 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV+EF+PQIP E A TPPSSWYT+P+F + EL R+FY+ WQV G +DQ+K+P +F+G
Sbjct: 79 QSLVHEFDPQIPPEDAHTPPSSWYTEPAFYSHELERIFYKGWQVAGISDQIKEPNQYFTG 138
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++V RD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW YG+DG+L KA+
Sbjct: 139 SLGNVEYLVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMDGSLAKAS 198
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ ++ + KE GLVPL+VA WGPFVL+++ + +E D V EWLG S+E +
Sbjct: 199 KAKPEQNLDPKELGLVPLKVAVWGPFVLISLDRSL--EEGGD---VGTEWLGTSAEDVKA 253
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D SL ++ R E+ +E NWK+F DNYLD YHVPYAHK A+ L D+Y T + E V+
Sbjct: 254 HAFDPSLQFIHRSEFPMESNWKIFSDNYLDSSYHVPYAHKYYATELNFDTYDTQMIENVT 313
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR E GS+ D R+G +A YAF YPNF + RYGPWM T + PL P +CK+V DY+
Sbjct: 314 IQRVE-GSSNKPDGFDRVGIQAFYAFAYPNFAVERYGPWMTTMHIHPLGPRKCKLVVDYY 372
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ S+ DDK +IE+ + ++ VQ ED++LCE VQRGLE+PAY SGRY +E+ ++HFH
Sbjct: 373 IENSMLDDKDYIEKGIAINDNVQREDVVLCESVQRGLETPAYRSGRYVMPIEKGIHHFHC 432
Query: 375 LLHCNL 380
L L
Sbjct: 433 WLQQTL 438
>gi|109509130|gb|ABG34274.1| choline monooxygenase [Ophiopogon japonicus]
Length = 438
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/366 (53%), Positives = 260/366 (71%), Gaps = 6/366 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV+EF+PQIP E A TPPSSWYT+P+F + EL R+FY+ WQV G +DQ+K+P +F+G
Sbjct: 78 QSLVHEFDPQIPPEDAHTPPSSWYTEPAFYSHELERIFYKGWQVAGISDQIKEPNQYFTG 137
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++V RD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW YG+DG+L KA+
Sbjct: 138 SLGNVEYLVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMDGSLAKAS 197
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ ++ + KE GLVPL+VA WGPFVL+++ + +E D V EWLG S+E +
Sbjct: 198 KAKPEQNLDPKELGLVPLKVAVWGPFVLISLDRSL--EEGGD---VGTEWLGTSAEDVKA 252
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D SL ++ R E+ +E NWK+F DNYLD YHVPYAHK A+ L D+Y T + E V+
Sbjct: 253 HAFDPSLQFIHRSEFPMESNWKIFSDNYLDSSYHVPYAHKYYATELNFDTYDTQMIENVT 312
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR E GS+ D R+G +A YAF YPNF + RYGPWM T + PL P +CK+V DY+
Sbjct: 313 IQRVE-GSSNKPDGFDRVGIQAFYAFAYPNFAVERYGPWMTTMHIHPLGPRKCKLVVDYY 371
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ S+ DDK +IE+ + ++ VQ ED++LCE VQRGLE+PAY SGRY +E+ ++HFH
Sbjct: 372 IENSMWDDKDYIEKGIAINDNVQREDVVLCESVQRGLETPAYRSGRYVMPIEKGIHHFHC 431
Query: 375 LLHCNL 380
L L
Sbjct: 432 WLQQTL 437
>gi|260666130|gb|ACX47904.1| choline monooxygenase [Haloxylon ammodendron]
Length = 448
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/365 (54%), Positives = 260/365 (71%), Gaps = 8/365 (2%)
Query: 13 AAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFF 72
+ Q+LVY+F+P IP E ALTPPS+WYT+P+F + EL R+FY+ WQ+ GY+DQ+K+ +F
Sbjct: 88 SVQELVYKFDPTIPAEDALTPPSTWYTEPAFYSHELERIFYKGWQIAGYSDQVKEKNQYF 147
Query: 73 SGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLK 132
+GR+G VEF+VCRD G++HAFHNVC H ASILA GSGKKS FVCPYHGW +G++G L K
Sbjct: 148 TGRLGNVEFLVCRDGEGQVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVFGMNGDLTK 207
Query: 133 ATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEIL 192
AT+ + F+ KE GLV L+VA WGPFVL+++ K+ E D V EWLG ++E +
Sbjct: 208 ATQ-AETQTFDPKELGLVALKVAVWGPFVLISVDKDL---PETD---VGTEWLGKTAEDV 260
Query: 193 SINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK 252
+ D +L ++ R E+ +ECNWKVFCDNYLD YHVPYAHK A+ L D+Y T + EK
Sbjct: 261 KAHAFDPALQFIHRSEFPMECNWKVFCDNYLDSSYHVPYAHKYYATELDFDTYDTQMIEK 320
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
V IQR S S + D RLGS+A YAF YPNF + RYGPWM T V PL +CK+V D
Sbjct: 321 VVIQRVGSSSNK-PDGFDRLGSQAFYAFAYPNFAVERYGPWMTTMHVQPLGLRKCKLVVD 379
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
Y+L+ S DK +IE+ + ++ VQ ED +LCE VQRGLE+PAY SGRY +E+ ++HF
Sbjct: 380 YYLEESKLGDKEYIEKGIAINDNVQAEDKVLCESVQRGLETPAYSSGRYVMPIEKGIHHF 439
Query: 373 HSLLH 377
H LH
Sbjct: 440 HCWLH 444
>gi|363818265|gb|AEW31326.1| choline monooxygenase [Haloxylon persicum]
Length = 447
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/365 (54%), Positives = 260/365 (71%), Gaps = 8/365 (2%)
Query: 13 AAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFF 72
+ Q+LVY+F+P IP E ALTPPS+WYT+P+F + EL R+FY+ WQ+ GY+DQ+K+ +F
Sbjct: 87 SVQELVYKFDPTIPAEDALTPPSTWYTEPAFYSHELERIFYKGWQIAGYSDQIKEKNQYF 146
Query: 73 SGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLK 132
+GR+G VEF+VCRD G++HAFHNVC H ASILA GSGKKS FVCPYHGW +G++G L K
Sbjct: 147 TGRLGNVEFLVCRDGEGQVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVFGMNGDLTK 206
Query: 133 ATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEIL 192
AT+ + F+ KE GLV L+VA WGPFVL+++ K+ E D V EWLG ++E +
Sbjct: 207 ATQ-AETQTFDPKELGLVALKVAVWGPFVLISVDKDL---PETD---VGTEWLGKTAEDV 259
Query: 193 SINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK 252
+ D +L ++ R E+ +ECNWKVFCDNYLD YHVPYAHK A+ L D+Y T + EK
Sbjct: 260 KAHAFDPALQFIHRSEFPMECNWKVFCDNYLDSSYHVPYAHKYYATELDFDTYDTQMIEK 319
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
V IQR S S + D RLGS+A YAF YPNF + RYGPWM T V PL +CK+V D
Sbjct: 320 VVIQRVGSSSNK-PDGFDRLGSQAFYAFAYPNFAVERYGPWMTTMHVQPLGLRKCKLVVD 378
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
Y+L+ S DK +IE+ + ++ VQ ED +LCE VQRGLE+PAY SGRY +E+ ++HF
Sbjct: 379 YYLEESKLGDKEYIEKGIAINDNVQAEDKVLCESVQRGLETPAYSSGRYVMPIEKGIHHF 438
Query: 373 HSLLH 377
H LH
Sbjct: 439 HCWLH 443
>gi|125492111|gb|ABN43460.1| chloroplast choline monooxygenase [Spinacia oleracea]
Length = 439
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/366 (53%), Positives = 259/366 (70%), Gaps = 6/366 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV+EF+PQIP E A TPPSSWYT+P+F + EL R+FY+ WQV G +DQ+K+P +F+G
Sbjct: 79 QSLVHEFDPQIPPEDAHTPPSSWYTEPAFYSHELERIFYKGWQVAGISDQIKEPNQYFTG 138
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++V RD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW YG+DG+L KA+
Sbjct: 139 SLGNVEYLVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMDGSLAKAS 198
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ ++ + KE GLVPL+VA WGPFVL+++ + +E D V EWLG S+E +
Sbjct: 199 KAKPEQNLDPKELGLVPLKVAVWGPFVLISLDRSL--EEGGD---VGTEWLGTSAEDVKA 253
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D SL ++ R E +E NWK+F DNYLD YHVPYAHK A+ L D+Y T + E V+
Sbjct: 254 HAFDPSLQFIHRSELPMESNWKIFSDNYLDSSYHVPYAHKYYATELNFDTYDTQMIENVT 313
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR E GS+ D R+G +A YAF YPNF + RYGPWM T + PL P +CK+V DY+
Sbjct: 314 IQRVE-GSSNKPDGFDRVGIQAFYAFAYPNFAVERYGPWMTTMHIHPLGPRKCKLVVDYY 372
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ S+ DDK +IE+ + ++ VQ ED++LCE VQRGLE+PAY SGRY +E+ ++HFH
Sbjct: 373 IENSMLDDKDYIEKGIAINDNVQREDVVLCESVQRGLETPAYRSGRYVMPIEKGIHHFHC 432
Query: 375 LLHCNL 380
L L
Sbjct: 433 WLQQTL 438
>gi|20137680|sp|O22553.1|CHMO_BETVU RecName: Full=Choline monooxygenase, chloroplastic; Flags:
Precursor
gi|2522210|gb|AAB80954.1| choline monooxygenase [Beta vulgaris]
Length = 446
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/367 (52%), Positives = 264/367 (71%), Gaps = 8/367 (2%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
+ LV+EF+P+IP E ALTPPS+WYT+P+F + EL R+FY+ WQV GY++Q+K+ +F+G
Sbjct: 86 RSLVHEFDPEIPPEDALTPPSTWYTEPAFYSHELERIFYKGWQVAGYSEQVKEKNQYFTG 145
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++V RD G++HAFHNVC H ASILA GSGKKS FVCPYHGW YGLDG+L KA+
Sbjct: 146 SLGNVEYLVSRDGQGELHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGLDGSLAKAS 205
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILS 193
+ T ++ + KE GL PL+VA WGPF+L+++ + +D+N V EW+G S+E +
Sbjct: 206 KATETQNLDPKELGLAPLKVAEWGPFILISLDR------SLDANADVGTEWIGKSAEDVK 259
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ D +L + R E+ +ECNWKVFCDNYLD YHVPYAHK A+ L D+Y+T + EK
Sbjct: 260 AHAFDPNLKFTHRSEFPMECNWKVFCDNYLDSSYHVPYAHKYYAAELDFDTYNTEMIEKC 319
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
IQR S S + D RLG++A YAFIYPNF + RYG WM T V+P+ +CK+V DY
Sbjct: 320 VIQRVGSSSNK-PDGFDRLGTEAFYAFIYPNFAVERYGTWMTTMHVVPMGQRKCKLVVDY 378
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+L+ ++ DDKA+I++ + ++ VQ ED +LCE VQRGLE+PAY SGRY +E+ ++HFH
Sbjct: 379 YLEKAMLDDKAYIDKGIAINDNVQKEDKVLCESVQRGLETPAYRSGRYVMPIEKGIHHFH 438
Query: 374 SLLHCNL 380
LH L
Sbjct: 439 CWLHETL 445
>gi|31879440|dbj|BAC77698.1| choline monooxygenase [Atriplex nummularia]
Length = 438
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 256/363 (70%), Gaps = 8/363 (2%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV +F+P +P E ALTPPSSWYT+P+F A EL R+FY+ WQV GY+DQ+K+ +F+G
Sbjct: 80 QSLVKDFDPLVPAEDALTPPSSWYTEPAFYAHELDRIFYKGWQVAGYSDQVKEANQYFTG 139
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++VCRD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW YG++G+L KA+
Sbjct: 140 TLGNVEYLVCRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMNGSLTKAS 199
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ T + N E GLVPL+VA WGPF+L+++ + + +V S EWLG +E +
Sbjct: 200 KATAEQSLNPDELGLVPLKVAEWGPFILISLDRSSREVGDVGS-----EWLGSCAEDVKA 254
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D +L ++ R E+ IE NWK+F DNYLD YHVPYAHK A+ L D+Y T + V+
Sbjct: 255 HAFDPNLQFIHRSEFPIESNWKIFSDNYLDSSYHVPYAHKYYATELDFDTYQTDMVGNVT 314
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR S G + RLG++A YAF YPNF + RYGPWM T ++PL P +CK+V DY+
Sbjct: 315 IQRVAGTSNNGFN---RLGTQAFYAFAYPNFAVERYGPWMTTMHIVPLGPRKCKLVVDYY 371
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ S DDK +IE+ + ++ VQ ED++LCE VQ+GLE+PAY SGRY +E+ ++HFH
Sbjct: 372 IEKSKLDDKDYIEKGIAINDNVQKEDVVLCESVQKGLETPAYRSGRYVMPIEKGIHHFHC 431
Query: 375 LLH 377
LH
Sbjct: 432 WLH 434
>gi|71040652|dbj|BAE07177.2| choline monooxygenase [Beta vulgaris]
Length = 447
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 192/367 (52%), Positives = 263/367 (71%), Gaps = 8/367 (2%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
+ LV+EF+P+IP E ALTPPS+WYT+P+F + EL R+FY+ WQV GY++Q+K+ +F+G
Sbjct: 87 RSLVHEFDPEIPPEDALTPPSTWYTEPAFYSHELERIFYKGWQVAGYSEQVKEKNQYFTG 146
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++V RD G++HAFHNVC ASILA GSGKKS FVCPYHGW YGLDG+L KA+
Sbjct: 147 SLGNVEYLVSRDGQGELHAFHNVCTQRASILACGSGKKSCFVCPYHGWVYGLDGSLAKAS 206
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILS 193
+ T ++ + KE GL PL+VA WGPF+L+++ + +D+N V EW+G S+E +
Sbjct: 207 KATETQNLDPKELGLAPLKVAEWGPFILISLDR------SLDANADVGTEWIGKSAEDVK 260
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ D +L + R E+ +ECNWKVFCDNYLD YHVPYAHK A+ L D+Y+T + EK
Sbjct: 261 AHAFDPNLKFTHRSEFPMECNWKVFCDNYLDSSYHVPYAHKYYAAELDFDTYNTEMIEKC 320
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
IQR S S + D RLG++A YAFIYPNF + RYG WM T V+P+ +CK+V DY
Sbjct: 321 VIQRVGSSSNK-PDGFDRLGTEAFYAFIYPNFAVERYGTWMTTMHVVPMGQRKCKLVVDY 379
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+L+ ++ DDKA+I++ + ++ VQ ED +LCE VQRGLE+PAY SGRY +E+ ++HFH
Sbjct: 380 YLEKAMLDDKAYIDKGIAINDNVQKEDKVLCESVQRGLETPAYRSGRYVMPIEKGIHHFH 439
Query: 374 SLLHCNL 380
LH L
Sbjct: 440 CWLHETL 446
>gi|20138024|sp|Q9LKN0.1|CHMO_ATRHO RecName: Full=Choline monooxygenase, chloroplastic; Flags:
Precursor
gi|8571468|gb|AAF76895.1|AF270651_1 choline monooxygenase [Atriplex hortensis]
Length = 438
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 256/363 (70%), Gaps = 8/363 (2%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV +F+P +P E ALTPPSSWYT+P+F A EL R+FY+ WQV GY+DQ+K+ +F+G
Sbjct: 80 QSLVKDFDPLVPAEDALTPPSSWYTEPAFYAHELDRIFYKGWQVAGYSDQVKEANQYFTG 139
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++VCRD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW YG++G+L KA+
Sbjct: 140 TLGNVEYLVCRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMNGSLTKAS 199
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ T + N E GLVPL+VA WGPF+L+++ + + +V S EWLG +E +
Sbjct: 200 KATPEQSLNPDELGLVPLKVAVWGPFILISLDRSSREVGDVGS-----EWLGSCAEDVKA 254
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D +L ++ R E+ IE NWK+F DNYLD YHVPYAHK A+ L D+Y T + V+
Sbjct: 255 HAFDPNLQFINRSEFPIESNWKIFSDNYLDSSYHVPYAHKYYATELDFDTYQTDMVGNVT 314
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR S G + RLG++A YAF YPNF + RYGPWM T ++PL P +CK+V DY+
Sbjct: 315 IQRVAGTSNNGFN---RLGTQAFYAFAYPNFAVERYGPWMTTMHIVPLGPRKCKLVVDYY 371
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ S DDK +IE+ + ++ VQ ED++LCE VQ+GLE+PAY SGRY +E+ ++HFH
Sbjct: 372 IEKSKLDDKDYIEKGIAINDNVQKEDVVLCESVQKGLETPAYRSGRYVMPIEKGIHHFHC 431
Query: 375 LLH 377
LH
Sbjct: 432 WLH 434
>gi|21217447|gb|AAM43920.1| choline monooxygenase [Suaeda liaotungensis]
gi|109706835|gb|ABG43004.1| choline monooxygenase [Suaeda salsa]
Length = 442
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 254/363 (69%), Gaps = 7/363 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
+LV+EF+P+IP E A TPPSSWYT+P+F + EL R+FY+ WQV G +DQ+K+ +F+G
Sbjct: 83 NQLVHEFDPKIPPEDAFTPPSSWYTEPAFYSHELDRIFYKGWQVAGISDQIKEKNQYFTG 142
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE+VV RD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW +G+DG L KAT
Sbjct: 143 TLGNVEYVVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVFGMDGDLTKAT 202
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ T + F+ KE+GL PL+VA WGPFVL+++ K + V EWLG S+E +
Sbjct: 203 QTTDAQTFDPKEYGLKPLKVAVWGPFVLISLDKTLPESD------VGTEWLGSSAEDVKA 256
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D SL ++ R E+ +ECNWKVF DNYLD YHVPYAHK A+ L D+Y T KV
Sbjct: 257 HAFDPSLKFIHRSEFPMECNWKVFSDNYLDSSYHVPYAHKYYATELDFDTYDTQTIGKVV 316
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR S +T D RLG KA YAF YPNF + RYGPWM T V P+A +CK+V DY+
Sbjct: 317 IQRVGS-NTNRPDGFDRLGEKAFYAFTYPNFAVERYGPWMTTMHVQPIAQRKCKLVVDYY 375
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ SL D+K +IE+ + ++ VQ ED +LCE VQ+GLE+PAY SGRY +E+ ++HFH
Sbjct: 376 IEDSLLDNKDYIEKGIAINDNVQKEDKVLCESVQKGLETPAYRSGRYVMPIEKGIHHFHC 435
Query: 375 LLH 377
LH
Sbjct: 436 WLH 438
>gi|19743664|gb|AAL92561.1| choline monooxygenase [Atriplex prostrata]
Length = 438
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 253/363 (69%), Gaps = 8/363 (2%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q LV +F+P IP E A TPPSSWYT+P+F A EL R+FY+ WQV GY+DQ+K+ +F+G
Sbjct: 80 QSLVKDFDPSIPAEDAFTPPSSWYTEPAFYAHELDRIFYKGWQVAGYSDQVKEANQYFTG 139
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE++V RD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW YG++GTL KA+
Sbjct: 140 TLGNVEYLVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMNGTLTKAS 199
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ T + N E GLVPL+VA WGPF+L+++ + + +V S EWLG +E +
Sbjct: 200 KATAEQSLNPDELGLVPLKVAEWGPFILISLDRSSREVGDVGS-----EWLGSCAEDVKA 254
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D +L ++ R E+ IE NWK+F DNYLD YHVPYAHK A+ L D+Y T + V+
Sbjct: 255 HAFDPNLQFINRSEFPIESNWKIFSDNYLDSSYHVPYAHKYYATELDFDTYQTDMVGNVT 314
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR S G R+G++A YAF YPNF + RYGPWM T ++PL P +CK+V DY+
Sbjct: 315 IQRVAGTSNNGFS---RIGTQAFYAFAYPNFAVERYGPWMTTMHIVPLGPRKCKLVVDYY 371
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ S DDK +IE+ + ++ VQ ED++LCE VQ+GLE+PAY SGRY +E+ ++HFH
Sbjct: 372 IEKSKLDDKDYIEKGIAINDNVQKEDVVLCESVQKGLETPAYRSGRYVMPIEKGIHHFHC 431
Query: 375 LLH 377
LH
Sbjct: 432 WLH 434
>gi|411107498|gb|AFW04225.1| choline monooxygenase [Suaeda maritima]
Length = 442
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/363 (54%), Positives = 256/363 (70%), Gaps = 7/363 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
+LV+EF+P+IP E A TPPSSWYT+P+F + EL R+FY+ WQV G +DQ+K+ +F+G
Sbjct: 83 NQLVHEFDPKIPPEDAFTPPSSWYTEPAFYSHELDRIFYKGWQVAGISDQIKEKNQYFTG 142
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
+G VE+VV RD GK+HAFHNVC H ASILA GSGKKS FVCPYHGW +G+DG L KAT
Sbjct: 143 TLGNVEYVVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVFGMDGDLTKAT 202
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ T + F+ KE+GLVPL+VA WGP VL+++ + + E D V EWLG S+E +
Sbjct: 203 QTTDAQTFDPKEYGLVPLKVAVWGPIVLISLD---ITRPESD---VGTEWLGSSAEDVKA 256
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ D SL ++ R E+ +ECNWKVF DNYLD YHVPYAHK A+ L D+Y T KV
Sbjct: 257 HAFDPSLKFIHRSEFPMECNWKVFSDNYLDSSYHVPYAHKYYATELDFDTYDTQTIGKVV 316
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQR S +T D RLG KA YAF YPNF + RYGPWM T V P+A +CK+V DY+
Sbjct: 317 IQRVGS-NTNRPDGFDRLGEKAFYAFTYPNFAVERYGPWMTTMHVQPIAQRKCKLVVDYY 375
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ SL D+K +IE+ + ++ VQ ED +LCE VQ+GLE+PAY SGRY +E+ ++HFH
Sbjct: 376 IEDSLLDNKDYIEKGIAINDNVQKEDKVLCESVQKGLETPAYRSGRYVMPIEKGIHHFHC 435
Query: 375 LLH 377
LH
Sbjct: 436 WLH 438
>gi|384247337|gb|EIE20824.1| choline monooxygenase, partial [Coccomyxa subellipsoidea C-169]
Length = 357
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/353 (49%), Positives = 229/353 (64%), Gaps = 5/353 (1%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A TPPSSWYT + E +RVF SW VG+ LK+ F +G + +V+ R +
Sbjct: 1 QASTPPSSWYTSQAHTDSEANRVFSSSWVYVGHLGSLKESGTFTAGTYMGMPYVLARSAD 60
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
G++ AFHNVCRHHA+ +A GSG++ F CPYHGWTYGLDG L +A + GI++F ++G
Sbjct: 61 GQLRAFHNVCRHHAAAVALGSGRQDCFTCPYHGWTYGLDGRLRRAPHMRGIENFRAADYG 120
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L L + TWG F+ LN + + A G + + DS L ++ +
Sbjct: 121 LRQLRMRTWGHFIFLNFDSNDITCCTGVGSFEAQLGPEGLQAMEAAGIADSHLVHVASQS 180
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
YT++CNWKVFCDNYLDGGYHV AH LA+GL L +YS+++YE SIQ C+ +
Sbjct: 181 YTLQCNWKVFCDNYLDGGYHVSIAHPDLAAGLDLTTYSSTIYESCSIQSCQPKNAAKV-- 238
Query: 269 THRLGSK-AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
RLG + A YAF+YPN MINRYGPWMDTNLV+P P RC V F+Y+L+ SL D + I+
Sbjct: 239 --RLGEREAAYAFVYPNLMINRYGPWMDTNLVLPDGPRRCTVHFEYWLEQSLVHDSSLID 296
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
SL DS+QVQ EDI LCE VQRGL SPAY +GRYAP +EQ M+HFH LL +L
Sbjct: 297 SSLADSDQVQQEDIALCEAVQRGLHSPAYDTGRYAPGLEQPMFHFHKLLQRDL 349
>gi|303285079|ref|XP_003061830.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226457160|gb|EEH54460.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 338
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/353 (50%), Positives = 233/353 (66%), Gaps = 21/353 (5%)
Query: 30 ALTPPSSWYTDPSFL-ALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
A TPPSSWYTD + + A+E VF WQ VG DQ+ D D+F+G +G F+V R D+
Sbjct: 1 ASTPPSSWYTDAAIIPAIEARAVFAEGWQAVGRVDQVSDVGDYFTGAVGN--FLVVRGDD 58
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
G + AFHNVCRHHA + + F CPYHGWTY G L KATR+TGI+ F+V + G
Sbjct: 59 GDVRAFHNVCRHHAM-------EATCFRCPYHGWTYDDKGALTKATRLTGIEGFDVSDNG 111
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L PL V TWGPFV +N+G + + + NEWLG + E + G+ + ++++ RRE
Sbjct: 112 LKPLRVDTWGPFVFVNLGGD-----DASAPPPVNEWLGEAGERMRSAGV-AEMTHVARRE 165
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT-- 266
Y + CNWKVFCDNYLDGGYHVP+AH LASG+ + SY T++ S+Q + + T
Sbjct: 166 YELNCNWKVFCDNYLDGGYHVPFAHPELASGVSMKSYETTIRGLHSLQTVTAAAAAATDR 225
Query: 267 --DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DK 323
D RLG A+YAFI+PNFM+NRYG W+DTN VIP CKVVF+Y+L+ ++ +
Sbjct: 226 VRDRDDRLGDAALYAFIHPNFMVNRYGKWLDTNWVIPTGAETCKVVFEYYLEKGVEGATE 285
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
AFIE+SL S+++Q ED LCE VQ G+ SP Y GRYAP+VE MYHFH+LL
Sbjct: 286 AFIEKSLAASDRIQREDTTLCEKVQEGVRSPGYGVGRYAPAVEAAMYHFHALL 338
>gi|291236901|ref|XP_002738379.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 400
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/369 (46%), Positives = 226/369 (61%), Gaps = 18/369 (4%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++ V +F+ IP+E A TPPS+W+T P F LE+H VF+ +W G DQ+ P FF+G
Sbjct: 32 RREVAKFDANIPVEAATTPPSTWFTRPEFHQLEVHTVFHDAWMFAGRVDQITKPGKFFTG 91
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKA 133
IG+ ++V RD+N ++ AF+NVCRHHA I+ G CPYHGWTY L G L KA
Sbjct: 92 TIGKEPYIVLRDENNELKAFYNVCRHHAMQIVNDTEGTVKDLQCPYHGWTYALSGRLKKA 151
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
TR+ GIK+F+ + FGL+P+ V WGP + + K + EE D+ E L L
Sbjct: 152 TRLRGIKNFSARNFGLIPMMVKAWGPLIFIRPNKIS---EEKDNFF---EDLESLKNRLD 205
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
G S + ++ R YT+ CNWKVF DNYLDGGYHV AHK L+ L SY T+++E
Sbjct: 206 GIGFSSGMKFMKRITYTLNCNWKVFVDNYLDGGYHVSTAHKDLSVALDASSYRTAVHEWH 265
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
SIQ + +E R+ AIYA I+PN MINRYGPW+DTN+ +PL C +VFDY
Sbjct: 266 SIQSVSAVGSE-----ERVCGDAIYAHIFPNLMINRYGPWIDTNVALPLTHNTCMIVFDY 320
Query: 314 FLD------GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
FL+ S +D + ++ S S++VQ EDI LCEGVQRGLES AY GRYAP VE
Sbjct: 321 FLEEDYIQQKSEEDLQNILDTSFTASDKVQQEDIFLCEGVQRGLESSAYDLGRYAPGVEF 380
Query: 368 TMYHFHSLL 376
+ FH L
Sbjct: 381 ADHMFHVKL 389
>gi|307105440|gb|EFN53689.1| hypothetical protein CHLNCDRAFT_136500 [Chlorella variabilis]
Length = 953
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/400 (45%), Positives = 227/400 (56%), Gaps = 51/400 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PI +A TPPSSWY P L E VF RSW V + +++ P + +G + +E++ CR
Sbjct: 558 PISRAATPPSSWYAQPGVLEREESAVFQRSWLAVAHANRVAAPGAYTAGSLLSLEWLACR 617
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D+ G +HAFHNVCRHHA+ILA G+G S F CPYHGWTYGLDG L +ATR+ GI+DF
Sbjct: 618 DEQGGLHAFHNVCRHHAAILAQGAGTASCFQCPYHGWTYGLDGRLQRATRLKGIEDFRAA 677
Query: 146 EFGLVPLEVATWGPFV--------------------------LLNMGKEAVHQEEVDSNV 179
+ GLVPL+V WG FV + ++ Q++
Sbjct: 678 DHGLVPLQVEEWGGFVWVRQRHFYGGSSRPAAASASSGGGSKAIRQQEQQQQQQQAGQEE 737
Query: 180 VANEWL-GGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS 238
WL G S GI SL + REY I CNWKVF DNYLDGGYHV AH LAS
Sbjct: 738 GVAAWLGPGGSAAALAAGIADSLVLVASREYEIACNWKVFIDNYLDGGYHVSVAHPELAS 797
Query: 239 GLQLDSYSTSLYEKVSIQRCE-----------------SGSTEGTDDTHRLGSKAIYAFI 281
GL L +Y ++L E++SIQ C+ SG + G R + I
Sbjct: 798 GLDLATYRSTLCERLSIQSCQPAAAAAAAEAGEAHAGTSGGSAGEQGMWR--RQRIAGGR 855
Query: 282 YPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDI 341
P YGPW+D N V+PLA RCKV+FDYFLD SL D FIE+SL S +VQ+ED+
Sbjct: 856 PPA-----YGPWLDANYVVPLAANRCKVLFDYFLDPSLAGDAGFIEESLAASHRVQLEDV 910
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
LCE VQRGL S AY +GRYAP VE M+HFH LLH +L
Sbjct: 911 ALCESVQRGLASAAYDTGRYAPGVEGPMFHFHQLLHADLA 950
>gi|255085933|ref|XP_002508933.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226524211|gb|ACO70191.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 364
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/367 (47%), Positives = 229/367 (62%), Gaps = 17/367 (4%)
Query: 27 IEKALTPPSSWYTDPSFL-ALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
+ + TPP+SWY DP + LE +VF + W G DQ+ + G G V++VV R
Sbjct: 1 VASSATPPASWYFDPLVVPTLEREKVFAKGWTWAGRLDQVATNGSYLVGATGTVKYVVVR 60
Query: 86 DDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
++G + AFHN CRHH +A F CPYHGWTY LDG+L+KAT+I G++DF V
Sbjct: 61 GEDGVLRAFHNACRHHGMEIANCPKSTAKCFACPYHGWTYDLDGSLVKATKIGGMRDFVV 120
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA---NEWLGGS-SEILSINGID-- 198
E GL P+ VA WGPFV+L +G A +EE + W+G + +S + D
Sbjct: 121 AEHGLKPIRVAEWGPFVMLRLGDPATEEEEEEEEEEEAPIEAWMGPDVAAKISASWSDDP 180
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS-GLQLDSYSTSLY-EKVSIQ 256
S+ ++ RREY + CNWKVF DNYLDGGYHVP+AH L + G+ + Y T +Y E VS+Q
Sbjct: 181 KSMRFVARREYRLRCNWKVFADNYLDGGYHVPFAHPALVTDGVDMRKYETEVYGEYVSVQ 240
Query: 257 RCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL- 315
+ + E T RLG A+YAF+YPN MINRYGPWMD N+V+P P C V+FDYF+
Sbjct: 241 THGAPAAELT----RLGDSALYAFVYPNLMINRYGPWMDVNVVLPTGPNECMVLFDYFIR 296
Query: 316 -DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
D + D AF+ +SL+ S+ VQ ED LCE VQ GLESP Y +GRYAP++E MYHFH
Sbjct: 297 ADATGATD-AFVNESLRASDAVQSEDKWLCEKVQGGLESPGYGTGRYAPAMEAAMYHFHR 355
Query: 375 LLHCNLT 381
L +LT
Sbjct: 356 RLWRDLT 362
>gi|161137617|gb|ABX57826.1| chloroplast choline monooxygenase [Chrysanthemum lavandulifolium]
Length = 201
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 176/202 (87%), Gaps = 1/202 (0%)
Query: 93 AFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
AFHNVCRHHAS+LA GSGK S FVCPYHGWTYG DG LLKATRITGI++FNVKEFGLVPL
Sbjct: 1 AFHNVCRHHASLLAFGSGKGSCFVCPYHGWTYGFDGALLKATRITGIRNFNVKEFGLVPL 60
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
VA WGPF+LLN+ ++A Q+ D +V EWLG +S+ILS NG+D+SLSYLCRREYTIE
Sbjct: 61 RVAIWGPFILLNIERQAFVQQHDDDDV-GMEWLGSTSDILSTNGVDTSLSYLCRREYTIE 119
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRL 272
CNWKVFCDNYLDGGYHVP+AHK LASGL+LDSYST+++EKVSIQRC+ G + +D RL
Sbjct: 120 CNWKVFCDNYLDGGYHVPFAHKDLASGLKLDSYSTTVFEKVSIQRCDGGEVQQQEDFDRL 179
Query: 273 GSKAIYAFIYPNFMINRYGPWM 294
G+K++YAFIYPNFM+NRYGPWM
Sbjct: 180 GAKSLYAFIYPNFMVNRYGPWM 201
>gi|154243361|gb|ABS71853.1| choline monooxygenase [Eucalyptus camaldulensis]
Length = 203
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 175/203 (86%)
Query: 92 HAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
HAFHNVCRHHAS+LA+GSGKKS FVCPYHGWTY L+G LL+ATR+ GI++F+VKEFGL+P
Sbjct: 1 HAFHNVCRHHASLLASGSGKKSCFVCPYHGWTYALNGALLRATRVHGIRNFDVKEFGLIP 60
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
L+VATWGPFVLLN K+ +EV+S++ A EW G +IL N ID SL+YLCRREY +
Sbjct: 61 LKVATWGPFVLLNFEKDVSPDQEVESDIAAKEWTGSCVDILGNNCIDPSLTYLCRREYIL 120
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
ECNWKVFCDNYLDGGYHVPYAHKGLASGL+LDSYST+++EKVS+Q CE GST +D R
Sbjct: 121 ECNWKVFCDNYLDGGYHVPYAHKGLASGLKLDSYSTTIHEKVSLQICEGGSTNNANDFDR 180
Query: 272 LGSKAIYAFIYPNFMINRYGPWM 294
LG++A+YAFIYPNFMINRYGPWM
Sbjct: 181 LGAEALYAFIYPNFMINRYGPWM 203
>gi|37524025|gb|AAQ92313.1| choline monooxygenase [Bassia scoparia]
Length = 290
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 200/294 (68%), Gaps = 8/294 (2%)
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
CR GK+HAFHNVC H ASILA GSGKKS FVCPYHGW +G++G L KAT+ + F+
Sbjct: 1 CRAGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVFGMNGDLTKATQAE-TQTFD 59
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
KE GLV L+VA WGPFVL+++ K E D V EWLG S+E + + D SL +
Sbjct: 60 AKELGLVALKVAVWGPFVLISLDKTL---PETD---VGTEWLGKSAEDVKAHAFDPSLQF 113
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST 263
+ R E+ +ECNWKVFCDNYLD YHVPYAHK A+ L D+Y T + E V IQR G+
Sbjct: 114 IHRSEFPMECNWKVFCDNYLDSSYHVPYAHKYYATELDFDTYDTQMIENVVIQRV-GGNK 172
Query: 264 EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
TD RLG++A YAF YPNF I RYGPWM T V PL +CK+V DY+++ S +DK
Sbjct: 173 NKTDGIDRLGNQAFYAFAYPNFAIERYGPWMTTMHVQPLGLRKCKLVVDYYIEDSKLEDK 232
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
+IE+ + ++ VQ ED +LCE VQRGLE+P+Y +GRY +E+ ++HFH LH
Sbjct: 233 DYIEKGIAINDNVQSEDKVLCESVQRGLETPSYSTGRYVMPIEKGIHHFHCWLH 286
>gi|440790499|gb|ELR11781.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 458
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 226/381 (59%), Gaps = 25/381 (6%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
+ + ++PQ+PIE+A TPP+SWYT P E VF+R WQ VG T+Q+KD +F+G
Sbjct: 79 REAHRWDPQVPIERATTPPASWYTSPEVFRREAPLVFHRGWQQVGRTEQVKDAGQYFTGE 138
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+ +VV RD G++ AF NVCRHHAS +ATG G KS VCPYHGWTY LDG L A R
Sbjct: 139 LLGEPYVVVRDQEGQLRAFFNVCRHHASKVATGEGCKSELVCPYHGWTYQLDGRLRVAPR 198
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ GIK+F KE GLVP++V WG ++ +N+ + S+ +E L ++L
Sbjct: 199 VGGIKEFKPKENGLVPIQVIEWGRWIFINI--------DSSSDTDLHEELKPLEDVLEST 250
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
L Y+C R Y ++ NWKV+ DNYLDGGYHV HK L + L YST ++ + S+
Sbjct: 251 QY-RKLEYMCTRNYKVKSNWKVYVDNYLDGGYHVSVLHKTLNAQLDASQYSTQVHGRWSL 309
Query: 256 QRCESGSTEGTDD--THRLGSK-AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
Q C+ + + + R+G + A YAF+YPNFMINRYG MDTN IP++ V FD
Sbjct: 310 QSCQGTNNQMEEQLLQERVGKQGAHYAFLYPNFMINRYGNLMDTNRAIPISVDETLVQFD 369
Query: 313 YFL--DGSLKDD--------KAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
YF+ DG + KA +E S++ S+ +Q ED + E VQ+GL S AY G
Sbjct: 370 YFMLKDGDTDQENQTKKEMVKALPESLEASIRISDGIQDEDAWVSEMVQQGLNSRAYDVG 429
Query: 360 RYAPSVEQTMYHFHSLLHCNL 380
RYAP VE Y FH LL +
Sbjct: 430 RYAPQVETAAYAFHQLLASDF 450
>gi|260810006|ref|XP_002599795.1| hypothetical protein BRAFLDRAFT_119334 [Branchiostoma floridae]
gi|229285077|gb|EEN55807.1| hypothetical protein BRAFLDRAFT_119334 [Branchiostoma floridae]
Length = 381
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 218/352 (61%), Gaps = 17/352 (4%)
Query: 18 VYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG 77
V +F + P+E+A TPPSSW+TDP+ LE VF +W VG TDQ+ P +F+G +G
Sbjct: 35 VQKFCTETPVERATTPPSSWFTDPAIYGLEKRTVFKWNWVAVGRTDQVASPGQYFTGVVG 94
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRI 136
+ F+V RD + + F NVCRHHA+ILA G F C YHGWTYGLDG L KA R+
Sbjct: 95 DEPFLVVRDKSNILRGFFNVCRHHAAILAGEDEGTADAFTCCYHGWTYGLDGRLTKAMRL 154
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNM-GKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
GI++F+ + FGL P+ V WGP VL+ G+E + + ++ V++ L + L
Sbjct: 155 RGIQNFSARNFGLKPMAVKAWGPLVLVRPDGQE--NGTDFETQVMS---LKAQLDEL--- 206
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
G S L ++ RR Y + CNWKV DNYLDGGYHV Y H+ LAS L +D+Y T + + S+
Sbjct: 207 GFTSGLRFVERRRYHVNCNWKVVLDNYLDGGYHVEYLHRNLASNLSIDTYRTEVQDLFSV 266
Query: 256 QRCE-SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
Q C SG + + R+G +IY +YPN MINRYGPW+DTN+ +PL +V++DY+
Sbjct: 267 QTCSGSGEDDQSMTRQRIGKTSIYGCVYPNLMINRYGPWLDTNIALPLTHNTTEVIYDYW 326
Query: 315 LDGSLKDD------KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
L + F++ SL++S+QVQ ED +CE VQ+GL+S AY GR
Sbjct: 327 LAEDFAQTMGETELQEFVQTSLRESDQVQQEDTFICERVQKGLKSSAYDVGR 378
>gi|291234214|ref|XP_002737044.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 416
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 222/376 (59%), Gaps = 21/376 (5%)
Query: 14 AQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS 73
+K V +F+PQ+P+E+A TPPSSWYT+PS L LE +F +W VG +Q++ P +F
Sbjct: 37 VEKEVLKFDPQLPVERAPTPPSSWYTNPSILELEKRSIFANNWVAVGRLNQVETPGQYFQ 96
Query: 74 GRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKA 133
G + F+VCRD+ ++ AF NVCRHHA + G G + F CPYHGW Y LDG L A
Sbjct: 97 GTFADESFIVCRDEKNQLQAFFNVCRHHAMPVVKGEGSITHFECPYHGWKYALDGRLTLA 156
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEI 191
++ GI+DF +++GL+P+ V +WGP V++ + G++ + + L I
Sbjct: 157 RKMRGIQDFKARDYGLIPMPVTSWGPLVMVKLIPGRDGGEDD--------FKQLASYEAI 208
Query: 192 LSINGID---SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL-ASGLQLDSYST 247
L G D + + + R+ + I+ NWK DN++DGGYH+ YAHK S D+Y
Sbjct: 209 LQQFGYDINKNEIKFFRRKSFPIKSNWKAIIDNFIDGGYHIDYAHKIFTGSYYDFDTYRM 268
Query: 248 -SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTR 306
+ + S Q ++ ++ R+G + Y FIYPNFM++RYGPW +TN+V+P
Sbjct: 269 LEVNKDYSTQIVDTLKSDDPKIEARIGKSSTYTFIYPNFMVSRYGPWFETNMVVPHGHNH 328
Query: 307 CKVVFDYFLDGSLKDDKA------FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
+ V+D++LD S + + ++++SL + QVQ ED +CEGVQRG+ S A+ SGR
Sbjct: 329 AEFVYDFYLDKSFVEKQTEEEVQRYVDESLVAANQVQGEDTEICEGVQRGMSSIAFESGR 388
Query: 361 YAPSVEQTMYHFHSLL 376
YAP +E + FH L
Sbjct: 389 YAPRIEYPQHEFHVRL 404
>gi|260804907|ref|XP_002597329.1| hypothetical protein BRAFLDRAFT_118191 [Branchiostoma floridae]
gi|229282592|gb|EEN53341.1| hypothetical protein BRAFLDRAFT_118191 [Branchiostoma floridae]
Length = 410
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 167/379 (44%), Positives = 222/379 (58%), Gaps = 31/379 (8%)
Query: 18 VYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG 77
V++F + PI++A TPP+SWYTD LE+ VF R+W VG +Q+ P FF+G +G
Sbjct: 41 VHKFCLETPIDEATTPPASWYTDGRLHDLEMRTVFRRNWVAVGVANQVAKPGQFFTGVLG 100
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRI 136
FVV RD + ++ AFHNVCRH A+I+ G G+ F C YHGWTY LDG L KA R+
Sbjct: 101 TDPFVVVRDQSDQLRAFHNVCRHRANIVVRQGEGQAQHFTCCYHGWTYRLDGRLSKALRL 160
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGGSSEILS 193
GIK+F+ +E GL P+ V TWGP VL+ + G+E EE S ++ + L
Sbjct: 161 RGIKNFSARENGLKPVAVRTWGPVVLVQLEGDGREDF--EEKTSPLLQH---------LD 209
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS---YSTSLY 250
G + ++CRR Y +CNWK+ +N D HV Y HK LA + L S +T LY
Sbjct: 210 TQGFTHGMRHICRRIYDAKCNWKLLVENAQDHNSHVEYVHKDLAKIVDLPSTKVQATELY 269
Query: 251 EKVSIQRCESGSTEGTDDT--HRLGSKA-IYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
K++ Q G+TE T R G I A ++PN INRYGPW+DTNL++PLA R
Sbjct: 270 SKMTGQ----GATENEQSTEGQRYGQAGYIVANVFPNLAINRYGPWLDTNLLLPLATDRT 325
Query: 308 KVVFDYFLDGSL------KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
++V DYFL+ K+ F+E SLKDS+QVQ ED +CE VQRGL S AY GRY
Sbjct: 326 RIVMDYFLEEDFVKNIGDKELAEFVETSLKDSDQVQKEDNDICESVQRGLTSSAYDVGRY 385
Query: 362 APSVEQTMYHFHSLLHCNL 380
P++E + FH L L
Sbjct: 386 LPAIEHGPHRFHIFLGTEL 404
>gi|384246235|gb|EIE19726.1| choline monooxygenase [Coccomyxa subellipsoidea C-169]
Length = 368
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 219/369 (59%), Gaps = 20/369 (5%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PIE+A TPPSSWY P LE +F+ +WQ++G+ Q + D+F+G + ++ +VV R
Sbjct: 5 PIEEANTPPSSWYLSPQVAELEKVAIFHNNWQMIGHASQAPNAGDYFTGSVADINYVVVR 64
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
++G++ AFHN+CRH A+ +A GSG F C YHGW Y +G AT++ GIK+F +
Sbjct: 65 GEDGQLRAFHNICRHKAAPVAEGSGCVQMFECMYHGWQYDHEGRFRGATKLKGIKNFKAQ 124
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG-GSSEILSINGIDSSLSYL 204
++GLVP+ + TWG FV + + + VA+ WLG G ++ + + L ++
Sbjct: 125 DYGLVPIRLDTWGQFVFI------LADPTSERGSVAD-WLGEGGRKMEACDMKAPDLVHV 177
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ-------- 256
Y ++CNWKVF DNYLD YH P+AH GL L +D Y + YE S Q
Sbjct: 178 RTVPYDLDCNWKVFNDNYLDTCYHCPFAHPGLCEALDMDEYHSVCYEHNSFQFSPLAPPE 237
Query: 257 -RCESGSTEGTDDTHRL---GSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
R + G T +R+ G Y F+YPN M+NRY WM T V+PL + KV+ D
Sbjct: 238 ERPQEGGEWDTITANRIEGDGRGPSYTFVYPNIMVNRYSLWMGTMRVLPLGEKKTKVLMD 297
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
Y++ S DDK +I+Q + + VQ ED+ +C+ VQ+GL SPAY GRYAPSVE+ ++HF
Sbjct: 298 YYVHTSKVDDKEWIDQVVMGEDIVQREDMHMCDLVQKGLASPAYDVGRYAPSVEEPVFHF 357
Query: 373 HSLLHCNLT 381
H L+H +L
Sbjct: 358 HKLVHRDLV 366
>gi|260830728|ref|XP_002610312.1| hypothetical protein BRAFLDRAFT_84051 [Branchiostoma floridae]
gi|229295677|gb|EEN66322.1| hypothetical protein BRAFLDRAFT_84051 [Branchiostoma floridae]
Length = 357
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 213/352 (60%), Gaps = 17/352 (4%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y D LE V+ +W VG TDQ+ P FF+G IG F+V D + + AF+NV
Sbjct: 3 YKDSRIHDLEARTVWRNNWVAVGRTDQVSTPGAFFTGTIGREPFIVSSDKSNTLRAFYNV 62
Query: 98 CRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
C HH +I+ +G+ + FVC YHGWTYGLDG L K T++ GIK+F + GL P+ V T
Sbjct: 63 CCHHGNIVEFQDAGEANQFVCCYHGWTYGLDGRLTKPTKLRGIKNFTARGNGLKPIAVRT 122
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWK 216
WGP V L + ++E D V+ L G S + ++CRR+Y + CNWK
Sbjct: 123 WGPLVFLRLDGYP-DEDEYDQKVLP------LMLELEEMGFSSGMRHVCRRQYQLNCNWK 175
Query: 217 VFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDT--HRLGS 274
+ DN DGGYH+ Y H+ L+S L L ++ T + + ++Q C G +G D R+G+
Sbjct: 176 LIVDNASDGGYHLEYVHRDLSSNLDLSTFRTEVGDIYNMQVC-IGKADGGDSAKRQRIGT 234
Query: 275 KAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA------FIEQ 328
KA+Y+ IYPN ++NRYGPW+D N+V+PL P R +++D++L + ++ + FI+Q
Sbjct: 235 KAVYSCIYPNLLVNRYGPWLDINIVLPLGPDRSLMIYDFYLKETFANEMSETELANFIDQ 294
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
SL+DS+QVQ ED +CEGVQRG+ES A+ GRYAP E ++ FH L +L
Sbjct: 295 SLQDSDQVQQEDTRVCEGVQRGMESTAFDVGRYAPGPEMPVHAFHLQLARDL 346
>gi|413943241|gb|AFW75890.1| hypothetical protein ZEAMMB73_223822 [Zea mays]
gi|413943242|gb|AFW75891.1| hypothetical protein ZEAMMB73_223822 [Zea mays]
Length = 239
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++LV EF+P +P++ A+TPPS WYTDP FL LE+ VF+R WQ VG+ Q+K+P DFF+G
Sbjct: 44 RRLVAEFDPAVPLDSAVTPPSGWYTDPDFLQLEIDSVFFRGWQAVGHIWQVKNPNDFFTG 103
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKAT 134
R+G VEFVVCRD NGK+HAFHNVCRHHAS+LA GSG K+ F CPYHGWTYGLDGTLLKAT
Sbjct: 104 RLGNVEFVVCRDANGKLHAFHNVCRHHASLLACGSGHKTCFQCPYHGWTYGLDGTLLKAT 163
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
RI+GIK+FN +FGL+P++VATWGPFVL+ E+ D+ V NEWLG +S++L
Sbjct: 164 RISGIKNFNKNDFGLIPIKVATWGPFVLIRFDDESTEDNVYDT--VGNEWLGSASDLLGT 221
Query: 195 NGIDSSLSYLCRREYTI 211
NGID+SL ++CR TI
Sbjct: 222 NGIDTSLPHICRSSVTI 238
>gi|168703266|ref|ZP_02735543.1| Rieske (2Fe-2S) domain protein [Gemmata obscuriglobus UQM 2246]
Length = 365
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 208/364 (57%), Gaps = 16/364 (4%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
Q L+ F+P+ P+E+A T P++WYT P ALE VF R+WQ+VG DQ+ +P + +
Sbjct: 7 QDLLTAFDPERPLERAGTIPNTWYTAPEIYALERDAVFARTWQMVGRADQVANPGQYLTA 66
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKA 133
I +V R+++G + AF NVCRH A+ L T G + C YHGWTY L G L
Sbjct: 67 DIAGEPVLVVRNESGDLKAFFNVCRHRAARLCTDECGTVTKLRCRYHGWTYDLSGALRGV 126
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEIL 192
G++DF ++ GL P+ VA WGPFV +++ +E VD+ + W G++
Sbjct: 127 PEFDGVQDFRREDNGLPPVAVAVWGPFVWVHLTPP---REPVDAYLGPLVSWAAGAAL-- 181
Query: 193 SINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK 252
L + RR Y + CNWKV+ DNYLDGGYHV H LA L +Y T+
Sbjct: 182 ------GDLKWHARRSYDLRCNWKVYVDNYLDGGYHVNTVHPALAGTLDYTNYRTTCDGN 235
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
+Q + EG R G A Y ++YPNFM+N Y MDTNLV+PL P RC+VVFD
Sbjct: 236 AVLQSSPTKPAEGDAGQTRTGDAA-YWWLYPNFMLNAYAGVMDTNLVLPLGPDRCRVVFD 294
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
++ SL D F +S++ +EQVQ EDI +CE VQR L S ++ +GR++ E +HF
Sbjct: 295 FYFADSLDHD--FRRKSVEVAEQVQQEDIGVCEEVQRNLHSRSFSTGRFSVKRENGGHHF 352
Query: 373 HSLL 376
H+ L
Sbjct: 353 HAKL 356
>gi|148655133|ref|YP_001275338.1| Rieske (2Fe-2S) domain-containing protein [Roseiflexus sp. RS-1]
gi|148567243|gb|ABQ89388.1| Rieske (2Fe-2S) domain protein [Roseiflexus sp. RS-1]
Length = 362
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 199/365 (54%), Gaps = 22/365 (6%)
Query: 19 YEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGE 78
Y F P + +A T P+ WY DP L +E R+F R+WQ+VG T+ +++P D+F+ +
Sbjct: 6 YTFQPDL--ARATTIPARWYIDPQMLTIEEERIFGRTWQLVGRTEHVRNPGDYFTCSVIN 63
Query: 79 VEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
VV RD GK+HAF+NVCRH A +A G G + C YH WTY LDGTL G
Sbjct: 64 EPLVVTRDTAGKLHAFYNVCRHRAGSVAEGCGNRKTLQCSYHAWTYNLDGTLRSTPEFEG 123
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
++DF+ ++GL P++V TWGPFV +N+ +A EV LG E + N
Sbjct: 124 VEDFDRADYGLRPVQVDTWGPFVFVNLDMQAPPLREV---------LGAIPE-ETANMPL 173
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ + R +Y I CNWKV+ DNYL+ GYH+P AH GL + Y + S Q
Sbjct: 174 ERMGFYKRVDYEIACNWKVYVDNYLE-GYHIPVAHPGLFKEIDYKQYRVETFRYYSKQ-- 230
Query: 259 ESGSTEGTDDTHR------LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
+ E D +R ++A+Y +I+PN M+N Y + N+++PL R +F+
Sbjct: 231 HAPIRENPDSLYRRHLEEGAPAQALYYWIFPNLMLNIYPDNLQINIILPLGHERTLTIFE 290
Query: 313 -YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
Y LD + +S K S+ VQ EDI +CE VQ+ L S +Y GR++ E ++H
Sbjct: 291 WYVLDVDRPEVAEEFHRSFKFSDVVQKEDIEICEAVQKRLRSRSYNVGRFSVLRENGVHH 350
Query: 372 FHSLL 376
FH LL
Sbjct: 351 FHGLL 355
>gi|32892063|gb|AAP88973.1| choline monooxygenase [Oryza sativa Japonica Group]
Length = 164
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/167 (68%), Positives = 135/167 (80%), Gaps = 3/167 (1%)
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GL+P++VATWGPFVL ++ +E N V +EWLG +S++LS NGID+SL ++CRR
Sbjct: 1 GLIPIKVATWGPFVLAKF--DSGFSQETADNTVGDEWLGSASDLLSRNGIDTSLPHICRR 58
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
EY IECNWKVFCDNYLDGGYHVPYAH LASGLQL SY T YE+VS+QRCES E +
Sbjct: 59 EYIIECNWKVFCDNYLDGGYHVPYAHGTLASGLQLQSYETHTYERVSVQRCESVQAE-QN 117
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
D RLG+KAIYAF+YPNFMINRYGPWMDTNLV+PL TRCKV+FDYF
Sbjct: 118 DFDRLGTKAIYAFVYPNFMINRYGPWMDTNLVVPLDATRCKVIFDYF 164
>gi|156743719|ref|YP_001433848.1| Rieske (2Fe-2S) domain-containing protein [Roseiflexus castenholzii
DSM 13941]
gi|156235047|gb|ABU59830.1| Rieske (2Fe-2S) domain protein [Roseiflexus castenholzii DSM 13941]
Length = 362
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 199/365 (54%), Gaps = 22/365 (6%)
Query: 19 YEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGE 78
Y F P + +A T P+ WY DP+ LA+E R+F R+WQ+VG + +++P D+F+ +
Sbjct: 6 YVFEPDL--ARATTIPARWYIDPAMLAIEEERIFGRTWQLVGRVEHVRNPGDYFTCSVVN 63
Query: 79 VEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
VV RD G +HAF+NVCRH A +A G G + C YH WTY LDGTL G
Sbjct: 64 EPLVVTRDTAGNLHAFYNVCRHRAGSVAEGCGNRKTLQCSYHAWTYNLDGTLRSTPEFEG 123
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
+++F+ ++GL P++V TWGPFV +N+ +A ++ LG E + N
Sbjct: 124 VENFDKADYGLRPVQVDTWGPFVFVNLDPQAPPLRDM---------LGAIPE-ETANMPL 173
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ + R +Y I CNWKV+ DNYL+ GYH+P AH GL + Y + S Q
Sbjct: 174 ERMGFYKRVDYEINCNWKVYVDNYLE-GYHIPVAHPGLFKEIDYKQYRVETFRYYSKQ-- 230
Query: 259 ESGSTEGTDDTHR------LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
+ E D +R ++A+Y +++PN M+N Y + N+++PL R +F+
Sbjct: 231 HAPIRENPDSLYRRHLEEGAPAQALYYWVFPNLMLNIYPDNLQINIILPLGHERTLTIFE 290
Query: 313 -YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
Y LD + +S K S+ VQ EDI +CE VQ+ L S +Y GR++ E ++H
Sbjct: 291 WYVLDVDRPEVAEEFHRSFKFSDVVQKEDIDICEAVQKRLRSRSYNVGRFSVLRENGVHH 350
Query: 372 FHSLL 376
FH LL
Sbjct: 351 FHGLL 355
>gi|383762826|ref|YP_005441808.1| putative oxidoreductase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383094|dbj|BAL99910.1| putative oxidoreductase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 374
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 206/372 (55%), Gaps = 23/372 (6%)
Query: 17 LVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
L+ ++ P +++A T P+ WY DP+ LALE R+FYR+WQ VG T ++ P DFF+ +
Sbjct: 7 LLSDYTPTDRLDEAWTLPARWYIDPALLALEKERIFYRTWQWVGSTALVQRPGDFFTYDL 66
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRI 136
V+ R +G + FHNVC H A +A G G + C YHGWTY LDG LL A
Sbjct: 67 YGEPLVITRGQDGVLRGFHNVCLHRAGPVAMGKGNRKSLQCRYHGWTYALDGQLLNAPEF 126
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
G+++++ + + L P+ V WGPFV +N+ DS E+LG ++ G
Sbjct: 127 EGVRNWSPEMYCLKPVRVTEWGPFVFVNLD---------DSAPPLLEFLGDIPAEVARAG 177
Query: 197 ID-SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
D +S+ + RR+Y ++CNWKV+ DNYL+ GYH+P AH GL + + Y + S
Sbjct: 178 FDIASMQPVERRDYYVDCNWKVYVDNYLE-GYHIPIAHPGLYREIDYEQYRVETFRYYSS 236
Query: 256 QRC------ESGSTEGTDDTHRLG---SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTR 306
Q SG G D + +A+Y +++PN M+N Y M N+++PL R
Sbjct: 237 QHAPIRPAPPSGQIPGRDRRYLRSEGEQQALYYWVFPNLMLNFYPDNMQINIIVPLETER 296
Query: 307 CKVVFDYFLD--GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
+F+++ GS + ++ ++QS+ S+++Q ED+ +C VQR L S AY GR++
Sbjct: 297 TLTIFEWWFKHPGSGEGWES-MQQSIAFSDEIQREDMEICNAVQRNLHSRAYNQGRFSVK 355
Query: 365 VEQTMYHFHSLL 376
E ++HF L+
Sbjct: 356 RENGVHHFQRLV 367
>gi|116621667|ref|YP_823823.1| Rieske (2Fe-2S) domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116224829|gb|ABJ83538.1| Rieske (2Fe-2S) domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 365
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 186/358 (51%), Gaps = 17/358 (4%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ +A T PS+WYTDP+ L E VF R+WQ VG + P +F+ I +V RD
Sbjct: 16 LARASTIPSAWYTDPATLERERRDVFGRTWQAVGLAASVDRPGTYFAADIAGEPVLVTRD 75
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G + AF NVCRH S L +G G + CPYHGWTY LDG L A G+++++
Sbjct: 76 AEGTLRAFSNVCRHRGSELCSGQGAGAVIRCPYHGWTYQLDGRLHGAPEFEGVENWDRAA 135
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L V WGP++ +NM A +V + E+ I SL + R
Sbjct: 136 VRLPEFRVELWGPYLFVNMDPAAPPLADVMGAI--------PREVAEIGCPIDSLRHAYR 187
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE-SGSTEG 265
R+Y IECNWKV+ DNYL+ GYH+P AH L L Y + + S Q + G
Sbjct: 188 RDYVIECNWKVYVDNYLE-GYHLPAAHPSLFRELDYAGYRVETFAQYSSQIAPIRAAASG 246
Query: 266 TDDTHRLG---SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDD 322
+ G ++A+Y +I+PN M+N Y + N ++PL P + +F++F G +
Sbjct: 247 EARRYEFGDNSNRALYYWIFPNIMLNVYPDNLSANFIVPLGPEKTLTIFEWFSYG----E 302
Query: 323 KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
+Q++ S+++Q EDI +CE VQRGL S Y GR++ E ++HFH LL L
Sbjct: 303 AGVAQQTIDFSDEIQQEDIRICESVQRGLRSRHYDRGRFSVKRENGVHHFHGLLAARL 360
>gi|389776627|ref|ZP_10194058.1| Rieske (2Fe-2S) domain-containing protein [Rhodanobacter
spathiphylli B39]
gi|388436429|gb|EIL93293.1| Rieske (2Fe-2S) domain-containing protein [Rhodanobacter
spathiphylli B39]
Length = 356
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 194/361 (53%), Gaps = 31/361 (8%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E+A P+ +Y + LA+E VF RSWQ+V +QL +P D ++G V ++ R
Sbjct: 9 PLERAHALPARYYAGEAMLAMEQRAVFGRSWQLVARQEQLAEPGDHVVDQVGGVPLLLVR 68
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNV 144
+G + AF NVCRH A LA GK + + C YHGWTY L+G L A + DF V
Sbjct: 69 GQDGVLRAFPNVCRHRAGPLALCDGKGARALHCKYHGWTYTLEGQLRSAPEMQDAADFRV 128
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSY 203
++ L PL V W V + + EEV GG +E I ID +++ Y
Sbjct: 129 EDIRLPPLRVHEWQGLVFVALDAAVPPFEEVH---------GGIAE--RIAPIDLAAMRY 177
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST 263
L R Y I+CNWKV+ DNYL+ GYH+P+ H GL+ L +Y T L+ S+Q S
Sbjct: 178 LRRDTYDIDCNWKVYVDNYLE-GYHLPHVHPGLSKVLDYRAYDTELFAWYSLQ---SSPL 233
Query: 264 EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF------DYFLDG 317
+ D + G +A Y F+YPN M+N + TN ++PL P RC++VF D
Sbjct: 234 RNSTDIYGDG-EAFYYFVYPNMMLNIMPGRLQTNRILPLGPGRCRIVFDYYYAQDAAAQA 292
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
++ D++F S++VQ EDI +CE VQRGL S AY GR P E ++HF +LL
Sbjct: 293 RMEADRSF-------SDEVQNEDIGICEAVQRGLASGAYTPGRLNPKRESGVWHFQNLLR 345
Query: 378 C 378
Sbjct: 346 A 346
>gi|389796169|ref|ZP_10199225.1| Rieske (2Fe-2S) domain-containing protein [Rhodanobacter sp. 116-2]
gi|388448809|gb|EIM04789.1| Rieske (2Fe-2S) domain-containing protein [Rhodanobacter sp. 116-2]
Length = 356
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 189/352 (53%), Gaps = 21/352 (5%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+AL+P +Y + LA+E VF RSWQ+V + L +P D +I V ++ R +
Sbjct: 14 RALSP--RYYFGDAMLAMEQRAVFARSWQLVAHQGLLAEPGDHAVEQIAGVPVLLVRGQD 71
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G + AF NVCRH A LA +GK + + C YHGWTY L G L A + +DF V++
Sbjct: 72 GVLRAFPNVCRHRAGPLALCNGKGAKALHCKYHGWTYTLAGQLRSAPEMQDARDFKVEDI 131
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCR 206
L PL V W V + + + +EV + + I ID +++ YL R
Sbjct: 132 RLPPLRVHEWQGLVFVALSDDVPAFDEVYAGIAER-----------IAPIDLAAMRYLRR 180
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
Y +ECNWKV+ DN+L+ GYH+P+ H GL+ L +Y T L+ S+Q S +
Sbjct: 181 DSYELECNWKVYIDNFLE-GYHLPHVHPGLSRVLDYRAYDTELFAWHSLQ---SSPLRNS 236
Query: 267 DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFI 326
D + G +A Y FIYPN M+N M TN ++PL P RC+V FDY+ + +A I
Sbjct: 237 GDIYGDG-QAFYYFIYPNVMLNIMPGRMQTNRILPLGPGRCRVEFDYYYAQDAQ-AQARI 294
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHC 378
S++VQ EDI +CE VQ+GL S Y +GR P E ++HF +LL
Sbjct: 295 AADQSFSDEVQAEDITICEAVQKGLASGFYSAGRLCPKREGGVWHFQNLLRA 346
>gi|389807893|ref|ZP_10204377.1| Rieske (2Fe-2S) domain-containing protein [Rhodanobacter
thiooxydans LCS2]
gi|388443374|gb|EIL99525.1| Rieske (2Fe-2S) domain-containing protein [Rhodanobacter
thiooxydans LCS2]
Length = 356
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 192/355 (54%), Gaps = 21/355 (5%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+++A P+ Y + LA+E VF RSWQ+V + QL +P D +I V ++ R
Sbjct: 10 LDRARALPAHCYVGEAMLAMERRAVFARSWQLVAHQGQLVEPGDHVVEQIAGVPVLLVRG 69
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G + AF NVCRH A LA +GK + + C YHGWTY L+G L A + DF V+
Sbjct: 70 GDGVLRAFPNVCRHRAGPLALCNGKGARALHCKYHGWTYTLEGQLRSAPEMQDACDFRVE 129
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ L PL V W V + + D+ +E GG +E ++ + ++ YL
Sbjct: 130 DIRLPPLRVHEWQGLVFVALS---------DAVPPFDEVYGGIAERIAPIEL-AATRYLR 179
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
R Y IECNWKV+ DN+L+ GYH+P+ H GL+ L +Y T L+ S+Q S
Sbjct: 180 RDSYEIECNWKVYVDNFLE-GYHLPHVHPGLSRVLDYRAYDTELFAWHSLQ---SSPLRN 235
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDD--K 323
+ D + G +A Y F+YPN M+N + TN ++PL P RC+V FDY+ +DD +
Sbjct: 236 SADIYGDG-QAFYYFVYPNVMLNIMPGRLQTNRILPLGPDRCRVEFDYYY---AQDDQAQ 291
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHC 378
A I S++VQ EDI +C VQ+GL S Y +GR P E ++HF +LL
Sbjct: 292 ARIAADASFSDEVQQEDIAICAAVQQGLASGYYDAGRLCPKREGGVWHFQNLLRA 346
>gi|352080179|ref|ZP_08951248.1| Rieske (2Fe-2S) iron-sulfur domain protein [Rhodanobacter sp.
2APBS1]
gi|351684888|gb|EHA67957.1| Rieske (2Fe-2S) iron-sulfur domain protein [Rhodanobacter sp.
2APBS1]
Length = 356
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 190/351 (54%), Gaps = 19/351 (5%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+AL+P +Y + LA+E VF RSWQ+V + L +P D ++ V ++ R +
Sbjct: 14 RALSP--RYYFGDTMLAMEQRAVFARSWQLVAHQGLLAEPGDHAVEQVAGVPVLLVRGQD 71
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G + AF NVCRH A LA +GK++ + C YHGWTY L G L A + DF V++
Sbjct: 72 GVLRAFPNVCRHRAGPLALCNGKEAKALHCKYHGWTYTLAGQLRSAPEMQDACDFKVEDI 131
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
L PL V W V + + + +EV + G + I I+ +++ YL R
Sbjct: 132 RLPPLRVHEWQGLVFVALSDDVPAFDEV--------YAGIAERIAPIDL--AAMRYLRRD 181
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
Y +ECNWKV+ DN+L+ GYH+P+ H GL+ L +Y T L+ S+Q S +
Sbjct: 182 SYELECNWKVYVDNFLE-GYHLPHVHPGLSRVLDYRAYDTELFAWHSLQ---SSPLRNSG 237
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
D + G +A Y FIYPN M+N M TN ++PL P RC+V FDY+ + +A I
Sbjct: 238 DIYGDG-QAFYYFIYPNVMLNIMPGRMQTNRILPLGPGRCRVEFDYYY-AQDEQAQARIA 295
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHC 378
S++VQ EDI +CE VQ+GL S Y +GR P E ++HF +LL
Sbjct: 296 ADQSFSDEVQAEDITICEAVQKGLASGFYSAGRLCPKREGGVWHFQNLLRA 346
>gi|413943238|gb|AFW75887.1| hypothetical protein ZEAMMB73_223822 [Zea mays]
Length = 145
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
YE+VS+QRCES E DD RLG+KA+YAF+YPNFMINRYGPWMDTNL +PL TRCKV
Sbjct: 13 YERVSVQRCESAPAE-PDDFDRLGTKALYAFVYPNFMINRYGPWMDTNLAVPLDSTRCKV 71
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
VFDYFLD SL DD+ FI++SL+DSEQVQ+EDI LCEGVQRGLESPAY GRYAPSVE M
Sbjct: 72 VFDYFLDKSLLDDQCFIKKSLEDSEQVQIEDIALCEGVQRGLESPAYSVGRYAPSVEMAM 131
Query: 370 YHFHSLLHCNLT 381
+HFH L+H NL+
Sbjct: 132 HHFHRLMHANLS 143
>gi|114568700|ref|YP_755380.1| Rieske (2Fe-2S) domain-containing protein [Maricaulis maris MCS10]
gi|114339162|gb|ABI64442.1| Rieske (2Fe-2S) domain protein [Maricaulis maris MCS10]
Length = 358
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 180/365 (49%), Gaps = 22/365 (6%)
Query: 20 EFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEV 79
+ +P+ P+ A Y P LAL+ + R WQVV L P D IG V
Sbjct: 12 QADPKRPLAAARALDPVRYVGPEALALDQREILARGWQVVAPVSALAGPGDHIVREIGGV 71
Query: 80 EFVVCRDDNGKIHAFHNVCRHHASILATGSGKKS-WFVCPYHGWTYGLDGTLLKATRITG 138
++ R+ G+++ F N+CRH A LA GK + C YHGW Y LDG L A +
Sbjct: 72 PILLVRNAAGQLNGFLNICRHRAGPLALCDGKGAKRLRCAYHGWAYDLDGQLRTAPEMQA 131
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
+ F+ + L +EV WG V + E+ + + A + ++E+
Sbjct: 132 AEGFDHHDIALARIEVEVWGGLVFART-RPGPGFAEIMAGMDA---IADTAEL------- 180
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ L + R Y + CNWKV+ DNYL+ GYH+P+ H L + Y+T L S+QR
Sbjct: 181 AGLHHHHSRIYDVACNWKVYVDNYLE-GYHLPFVHPDLTQVVSYPDYTTELGRYWSLQRS 239
Query: 259 ESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD-YFLDG 317
+ + + G +A+Y FIYPN M+N M TN V+ P C+V FD Y+ DG
Sbjct: 240 ---PVDAETEAYAAG-EALYFFIYPNTMLNILPGRMQTNRVVANGPDACRVEFDFYYADG 295
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
+A + + DS VQ ED ++CE VQ+GL S AY GR +P E ++H+H+LL
Sbjct: 296 EAG--RAEADDAFSDS--VQDEDRMICEHVQKGLASGAYRPGRLSPDQEAGVWHWHNLLR 351
Query: 378 CNLTN 382
N
Sbjct: 352 DAYAN 356
>gi|270567262|gb|ACZ92178.1| choline monooxygenase, partial [Triticum durum]
Length = 123
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 101/123 (82%), Gaps = 1/123 (0%)
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
YE+VS+QRCES E +D L KA YAF+YPNFMINRYGPWMDTNL +PL TRCKV
Sbjct: 2 YERVSVQRCESAPAE-QEDIDPLRDKATYAFVYPNFMINRYGPWMDTNLAVPLDATRCKV 60
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
VFDYFLD SL DD+ FI++SLKDSEQVQ+EDI LCEGVQRGLESPAY GRYAPSVE M
Sbjct: 61 VFDYFLDESLLDDQDFIDRSLKDSEQVQIEDIALCEGVQRGLESPAYGVGRYAPSVEMAM 120
Query: 370 YHF 372
+HF
Sbjct: 121 HHF 123
>gi|412988208|emb|CCO17544.1| choline monooxygenase [Bathycoccus prasinos]
Length = 917
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 191/416 (45%), Gaps = 65/416 (15%)
Query: 19 YEFNPQIPIEKAL---TP-PSSWYTDPSFLALELHRVFY--RSWQVVGYTDQLKDPQDFF 72
++F P +KA+ +P P S+YT E VF + W +G+ D+F
Sbjct: 494 HDFTPWTSFDKAIEDASPIPPSYYTSEKLAQRERATVFSPEKDWVCIGHVSDAPSVNDYF 553
Query: 73 SGRI----------GEVEFVVCRDDNGKIHAFHNVCRHH---------ASILATGSGKKS 113
+ + VE V R + A+ NVC+HH + A + +
Sbjct: 554 TTTVFSDESENAAAAAVEIVCVRTEENTFKAYENVCQHHFAKVADKKRGTCTAKANSCAA 613
Query: 114 WFVCPYHGWTYGL----DGTLLKATRITGIKDFNVK---EFGLVPLEVATWGPFVLLNMG 166
CPYHG+TY + +G L+ ATR+ G+++ K + G V T+GPFV L
Sbjct: 614 ALQCPYHGFTYDVSNEGNGKLISATRMKGMEERTEKIKLKGGYV---CETFGPFVFLKKD 670
Query: 167 KEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYTIECNWKVFCDNYLDG 225
+ + E IN D S ++ R + +E NWKVF DNYLDG
Sbjct: 671 ESSSSSSSSSLRTFLGADFASRVEEADINVSDRESFRHVARETFEVESNWKVFIDNYLDG 730
Query: 226 GYHVPYAHKGLAS-GLQLDSYSTSLYEKV-SIQRCESGSTEGTDDTHRLGSKAIYAFIYP 283
G+HVP+AHK L G + Y+ +L++ + SIQ + E T+ LGS A YAF +P
Sbjct: 731 GFHVPFAHKALVKEGCDMSKYNITLFDNMNSIQSVDVRKEENTNSRLGLGS-ATYAFAFP 789
Query: 284 NFMINRYGPWMDTNLVI--PLAPTRCKVVFDYFLDGSL----KDDKAFIEQSLKDSEQVQ 337
N +NRYG W+DTN+ P P +C V F++++D + D++ FI+QSL S VQ
Sbjct: 790 NVCLNRYGRWLDTNVAFPNPADPNKCVVEFNWYIDNTNHDEDDDEEVFIKQSLLASRVVQ 849
Query: 338 MEDIILCEGVQRGLESPAYC--------------------SGRYAPSVEQTMYHFH 373
ED LC VQ+GL S G Y+P E M+ FH
Sbjct: 850 DEDENLCASVQKGLRSKVASSSSSSSSSSRSGSGGDEDRQEGLYSPECESIMFAFH 905
>gi|429335015|ref|ZP_19215660.1| putative dioxygenase [Pseudomonas putida CSV86]
gi|428760288|gb|EKX82557.1| putative dioxygenase [Pseudomonas putida CSV86]
Length = 380
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 187/353 (52%), Gaps = 28/353 (7%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y +P + L+ + +SWQ V + +++++P + + I V RD +G + AF+NV
Sbjct: 32 YVEPEWFHLDQQAIIAKSWQWVCHVEKVREPGSYTTVDIAGHPIAVVRDQDGSLRAFYNV 91
Query: 98 CRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATW 157
C+H A + G GK VCPYH W YGL+G+L+ A + G+KDFN ++ L P++V +
Sbjct: 92 CKHRAHPVLQGEGKTRRIVCPYHSWCYGLNGSLVAAPHVGGLKDFNKEDIHLTPVQVEEF 151
Query: 158 GPFVLLNMGKEA--VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
FV +N+ +A +HQ+ D +A E L + +I L++ R Y I+ NW
Sbjct: 152 CGFVYVNLDPQAAPLHQQSGD---LAKEVLKWAPDI-------EKLTFARRLTYEIKSNW 201
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSK 275
K DN+L+ YH P AHK + + +D+Y + S E+G + + S
Sbjct: 202 KNVVDNFLEC-YHCPTAHKDFCTLVDMDTYKVETHGIYSSHMAEAGKGQNSAYDVSKASV 260
Query: 276 AIYA--FIYPNFMINRYGPWMDTNLV---IPLAPTRCKVVFDYFLDGSLKDDKAFIEQSL 330
+A +++PN + RY P + +V +P+ P R +D+FL+ DD ++++
Sbjct: 261 RTHAVWWLWPNTCLMRY-PGRSSMIVLNIVPMGPDRTFETYDFFLETPEPDDME--KEAI 317
Query: 331 KDSEQV-QMEDIILCEGVQRGLESPAYCSGRYAP------SVEQTMYHFHSLL 376
+ ++V Q+EDI L E VQRG+++PA+ GR E ++HFH L+
Sbjct: 318 RYLDEVLQVEDISLVENVQRGMQTPAFDQGRIVTDPNGSGKSEHALHHFHGLV 370
>gi|226362271|ref|YP_002780049.1| oxidoreductase [Rhodococcus opacus B4]
gi|226240756|dbj|BAH51104.1| putative oxidoreductase [Rhodococcus opacus B4]
Length = 386
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 163/343 (47%), Gaps = 26/343 (7%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P WYT P E +F SW VG +++ F + IG+V V+ RD +G +
Sbjct: 29 TLPLEWYTSPEVAEAEKKAIFASSWHYVGRAADVEETGMFVTADIGDVPIVIVRDRDGSL 88
Query: 92 HAFHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
+AFHNVCRH A+ ++ G++ C YH WTYGLDG+L A R + F ++ GL
Sbjct: 89 NAFHNVCRHRAAKVVLDEKGQRRTLQCHYHAWTYGLDGSLKGAPRSASEECFPQQQLGLR 148
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREY 209
TWGPF+ ++ DS + LG ++++ GID L + R EY
Sbjct: 149 KASAQTWGPFLFAHLD---------DSPADLFDQLGEVPDLIAAAGIDVDDLRFHFRSEY 199
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGL--QLDSYSTSLYEKVSIQRC--------E 259
I CNWKV +NYL+ YH P AH G + L Q+D+Y L + Q
Sbjct: 200 DIACNWKVAMENYLE-CYHCPTAHPGFSDVLDTQMDAYQLELEHTFAWQNGPLRPLPVNA 258
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYG--PWMDTNLVIPLAPTRCKVVFDYFLDG 317
TEG + Y I+PN IN P + ++P P C + DYF
Sbjct: 259 VPRTEGYTGRDGAVPEGRYFAIFPNLKININPGLPNLSIGPMVPTGPDDCHGILDYFFSA 318
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
+ + +I+ L +QV +ED +L E VQ+G+ S + GR
Sbjct: 319 DVT--QQWIDDMLVFDDQVGVEDRVLVESVQQGIRSGSLTEGR 359
>gi|78060815|ref|YP_367390.1| dioxygenase [Burkholderia sp. 383]
gi|77965365|gb|ABB06746.1| putative dioxygenase [Burkholderia sp. 383]
Length = 380
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 175/351 (49%), Gaps = 24/351 (6%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP + EL VF RSWQ V + +++++P ++ + V RD G + AF+NV
Sbjct: 33 YTDPKYFDAELDAVFRRSWQWVCHAEKVREPGAYYVADVAGRSIAVVRDRAGSLRAFYNV 92
Query: 98 CRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATW 157
C+H A L G GK CPYH W+Y LDG L +A + DF +E L ++V +
Sbjct: 93 CKHRAHHLLAGEGKARVITCPYHAWSYNLDGGLRQAPMTETLIDFRKEEICLSQVQVEEF 152
Query: 158 GPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKV 217
FV +NM A +A++ +EI +L++ R ++ I NWK
Sbjct: 153 CGFVYVNMDPAAAS--------LASQSGDLKAEIDRFAPDVGTLTFARRLQFDIRSNWKN 204
Query: 218 FCDNYLDGGYHVPYAHKGLASGLQLDSYSTS---LYEKVSIQRCESGSTEGTDDTHRLGS 274
DN+L+ YH P AHK S LQ D+Y + +Y + +G+T + +
Sbjct: 205 VVDNFLEC-YHCPTAHKDFVSLLQFDTYKVTTHGIYSSHMAKGGNAGNTAYSVEGATCDD 263
Query: 275 KAIYAFIYPNFMINRYGPWMDTNLV---IPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLK 331
A++ +++PN + RY P LV IP+AP R +D++ + S + IE
Sbjct: 264 HAVW-WVWPNTCLLRY-PGRANFLVLNIIPVAPDRTIETYDFYFE-SAEPTPQEIEAINY 320
Query: 332 DSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT------MYHFHSLL 376
+ +Q EDI L E VQRG+ +PA+ SGR +Q+ ++HFH L+
Sbjct: 321 VRDVLQQEDIDLVESVQRGMSTPAFESGRIVSDPQQSGMSEHALHHFHGLV 371
>gi|410456887|ref|ZP_11310737.1| Rieske (2Fe-2S) domain-containing protein [Bacillus bataviensis LMG
21833]
gi|409927128|gb|EKN64273.1| Rieske (2Fe-2S) domain-containing protein [Bacillus bataviensis LMG
21833]
Length = 365
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 177/358 (49%), Gaps = 23/358 (6%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ +A T PS YT P L +E +F ++WQ VG+ Q P DF + + + ++ R
Sbjct: 12 LSEAHTLPSWLYTTPEVLEVEKKEIFCKTWQYVGHISQFNKPGDFITTEVADRPIIISRG 71
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G+I AF+NVC H A+ L G G KS F CPYH WT+ DG+LL+A + G F+ ++
Sbjct: 72 QDGEIRAFYNVCTHRAAKLVEGEGNKSVFTCPYHAWTFRTDGSLLRAPNMGGCDHFDNQD 131
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
F L +++ F+ +N+ +A S + L E + S L +
Sbjct: 132 FCLKTIQLEIIQSFIFVNLDPDA------PSMAIQFPDLFQHVEKYDL----SKLKRIRV 181
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
+E NWKV DNYL+ H HK L S L + Y S+Y+ S Q +G
Sbjct: 182 KETICHSNWKVGIDNYLECD-HCSIVHKTLVSTLDMKQYEMSMYDYYSYQ---GTPLKGM 237
Query: 267 DDTHRLGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFL--DGSLKDD 322
LG Y ++YPN F + + + IP+ K V+ F D K++
Sbjct: 238 TSDFGLGQGGRYYWLYPNTWFSFDPGPANLSIHQSIPIDHKTTKYVYTTFFMTDEMTKEE 297
Query: 323 KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
+A + S+ D V+ ED+ +CE VQ+GLE+ AY GR++ + E ++ FH LL +L
Sbjct: 298 EALL--SIDD--LVRKEDLDICEVVQKGLETKAYKQGRFSLT-ENLVHQFHLLLQQDL 350
>gi|424915437|ref|ZP_18338801.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392851613|gb|EJB04134.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 378
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 184/360 (51%), Gaps = 24/360 (6%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
++L+ + Y DP + ++L +F ++WQ V + +++++P + + I V RD
Sbjct: 23 RSLSLNADAYIDPRWFNVDLKEIFAKTWQWVCHVEKVREPGSYIAVEIAGQPIAVVRDRE 82
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
G + AF+NVC+H A L +GSG + +CPYH WTY +DG L++A ++DFN K+
Sbjct: 83 GVLRAFYNVCKHRAHHLLSGSGTSTRIMCPYHAWTYRMDGQLVRAPHTETLEDFNTKDIC 142
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L ++V + F+ +N+ +A E ++ +EI L++ R
Sbjct: 143 LDQVKVEEFCGFIYVNLDPQATSLSEQSGDL--------ETEIRHWAPDIDKLTFGHRLT 194
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG--STEGT 266
Y I+ NWK DN+L+ YH P AHK + + +D+Y + + S ++G S+
Sbjct: 195 YDIKSNWKNVVDNFLEC-YHCPTAHKDFCTLVDMDTYKVTTHGIYSSHMADAGNSSSSAY 253
Query: 267 DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLV---IPLAPTRCKVVFDYFLDGSLKDDK 323
D ++ +++PN + RY P + +V IP P R +D++L+ ++
Sbjct: 254 DVSNATVKTHAVWWLWPNTCLMRY-PGRSSIIVLNVIPAGPDRTLETYDFYLETPEPNEM 312
Query: 324 AFIEQSLKDSEQV-QMEDIILCEGVQRGLESPAYCSGRY------APSVEQTMYHFHSLL 376
Q++K ++V Q EDI + E VQRG+ +PA+ GR + E ++HFH L+
Sbjct: 313 EL--QTIKYLDEVLQAEDISIVESVQRGMNTPAFTQGRIVNDPDGSGQSEHAVHHFHGLV 370
>gi|406708336|ref|YP_006758688.1| Rieske-type iron-sulfur protein [alpha proteobacterium HIMB59]
gi|406654112|gb|AFS49511.1| Rieske-type iron-sulfur protein [alpha proteobacterium HIMB59]
Length = 381
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 178/382 (46%), Gaps = 30/382 (7%)
Query: 8 SENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD 67
S NL+ QK F + + T P+ +YT P +E +FY+SW G+ QLK+
Sbjct: 4 SSNLLVRQKGDAPFTKDPSV--SYTMPARFYTSPDIYEIEKDAIFYKSWHYAGHASQLKE 61
Query: 68 PQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLD 127
+ + + I + + + +G++ AFHNVC H IL GSG+KS CPYH W +
Sbjct: 62 ERSYITTSIHDQNIFIAKGSDGELRAFHNVCAHRGHILLEGSGRKSVITCPYHAWAFDFS 121
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G L+ A + FN EF L +++ + +++N+ ++++ A ++ G
Sbjct: 122 GKLVNARNSENVAGFNKDEFSLKEVKLEVFCGMLMVNL--------DLNAKPFAEQFKGL 173
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
EI SL Y R + + NWKV DN+L+ YH AHK + ++SY T
Sbjct: 174 EEEIRQYMPSVDSLEYAQRDTFDVASNWKVLVDNFLE-CYHCSPAHKDFVDLVDMNSYRT 232
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAI---YA--FIYPNFMINRYGPWM---DTNLV 299
+++ S Q C + + + + YA F++PNF I W+ + NL
Sbjct: 233 ITHKRYSSQ-CAAAPLKTNSKAYSFEPGDVDFGYAGFFVWPNFTI-----WIYPGEANLS 286
Query: 300 I----PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPA 355
+ P +P R D+F G K E + + +Q EDI LCE VQ+GL S A
Sbjct: 287 VLQMNPSSPNRTIEYQDWFTPGG-KLSPQLKEAADYQKDVLQPEDIGLCESVQQGLNSKA 345
Query: 356 YCSGRYAPSVEQTMYHFHSLLH 377
Y GR+ T H++ H
Sbjct: 346 YNQGRFIVDKGLTELSEHAVHH 367
>gi|387790339|ref|YP_006255404.1| ring-hydroxylating dioxygenase, large terminal subunit [Solitalea
canadensis DSM 3403]
gi|379653172|gb|AFD06228.1| ring-hydroxylating dioxygenase, large terminal subunit [Solitalea
canadensis DSM 3403]
Length = 361
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 171/363 (47%), Gaps = 30/363 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVV---GYTDQLKD--PQDFFSGRIGEVEF 81
I A T P+S+Y + L +VF SWQ++ G Q +D P + G + E
Sbjct: 10 ITTAATLPASFYKSIEYFELSKEKVFANSWQLIEAAGNVQQAEDVFPFNLLPGFLNE-PL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
V+ RD + ++ F NVC H ++L GK C YHG + +DG + KD
Sbjct: 69 VLIRDHSSTLNCFSNVCTHRGNLLVHHPGKYRKLTCNYHGRRFNIDGRFESMPEFSEAKD 128
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS-S 200
F L + W F +++ Q E D N V L E + ID
Sbjct: 129 FPRACEDLHKVAAIEWNGFPFISL------QPEFDFNNV----LSIMDERVGFMPIDQFE 178
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
REY + NW ++CDNYL+G +HVPY H L L Y T LY+ ++Q
Sbjct: 179 FRSELSREYLVNANWALYCDNYLEG-FHVPYVHPDLNKVLDYKQYKTILYDYCNLQVGVG 237
Query: 261 GSTEGTDDTHR----LGSK--AIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDY 313
E D G+K A Y +I+PN M N Y PW + N+V PL+ +CKV F
Sbjct: 238 DDAEECFDLRENHVDYGNKIAAYYYWIFPNMMFNFY-PWGLSINIVKPLSIKQCKVTFLT 296
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
++ K DK +L D +V+ ED + E VQRG+ S Y SGR++P+ E+ ++HFH
Sbjct: 297 YMYDESKYDKG--AGALLD--KVEREDEFVVENVQRGINSRFYTSGRFSPTREKGVHHFH 352
Query: 374 SLL 376
LL
Sbjct: 353 QLL 355
>gi|83950158|ref|ZP_00958891.1| putative dioxygenase [Roseovarius nubinhibens ISM]
gi|83838057|gb|EAP77353.1| putative dioxygenase [Roseovarius nubinhibens ISM]
Length = 387
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 178/360 (49%), Gaps = 24/360 (6%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
++L+ + YT + + + RSWQ V + ++L++P + + I V RD +
Sbjct: 23 RSLSLKADAYTRQEWFQADRAAILGRSWQWVCHVEKLREPGAYIAIEIAGQPVAVLRDRD 82
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
G + AF+NVC+H A L G G + +CPYH W Y LDG L++A ++DFN K+
Sbjct: 83 GVLRAFYNVCKHRAHELLRGEGNTTRIMCPYHAWVYKLDGQLVRAPETDHLEDFNPKDIC 142
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L ++V+ + FV +N+ +A E N+ +EI L++ R
Sbjct: 143 LDAVQVSEFAGFVFVNLDPDAAPLAEQSGNL--------ETEIRHWAPDVDQLTFGHRLT 194
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT-- 266
Y I NWK DN+L+ YH P AHK + +D+Y + Y S ++G E +
Sbjct: 195 YEINSNWKNVVDNFLEC-YHCPTAHKDFCDLVDMDTYKVTTYGIYSSHMADAGQGENSAY 253
Query: 267 DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLV---IPLAPTRCKVVFDYFLDGSLKDDK 323
D ++ +++P + RY P + +V IP+ P + +D++L+ D
Sbjct: 254 DVSNATVRTHAVWWLWPTTCLMRY-PGRSSMIVLNIIPVGPDKTLETYDFYLETPEPD-- 310
Query: 324 AFIEQSLKDSEQV-QMEDIILCEGVQRGLESPAYCSGRYA--PS----VEQTMYHFHSLL 376
A +++ ++V Q+EDI L E VQRG+ +PA+ GR PS E ++HFH L+
Sbjct: 311 AMERDAIRYLDEVLQVEDISLVESVQRGMNTPAFAQGRIVSDPSGSGKSEHAVHHFHGLV 370
>gi|329848179|ref|ZP_08263207.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
gi|328843242|gb|EGF92811.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
Length = 344
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 162/352 (46%), Gaps = 24/352 (6%)
Query: 31 LTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGK 90
+T P+ WY DP+ +E +VF +WQ + + ++ P+ + + + V R D+G
Sbjct: 13 VTAPADWYVDPALWQVERRKVFAGNWQFLCHESDVEAPRQWRADVLAGYPVVAVRGDDGV 72
Query: 91 IHAFHNVCRHHASILATGSGK--KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
+ FHNVCRH A L C YHGW Y LDG L A DF+ +E+G
Sbjct: 73 LRGFHNVCRHRAGPLVKDEAGVCDGHLTCEYHGWKYMLDGRLRMARDFGAASDFDPREYG 132
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L P+ +A W V + + +E + A LG +L +G L RR
Sbjct: 133 LFPIRLAVWRGLVFAGLNEVLPDLDEELKPLDAR--LG----VLDWSGFRVGL----RRS 182
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
+ ++CNWK + +NYL+ GYHVP H L + + D Y ++ KV++ S + D
Sbjct: 183 HLLDCNWKTYVENYLE-GYHVPNVHPSLDAEILSDQYKVTVDGKVALHEVPPRSQDAVYD 241
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
++A+++PN IN Y + + P+ ++ + Y G K +
Sbjct: 242 -------GVWAWLWPNVAINVYQRGLMIERMSPVGHDNTRLDYTYLTPGGEK----VAAE 290
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
+L S+QV ED + E VQ L + Y +GR +P E + F + + L
Sbjct: 291 TLAMSDQVTAEDKWIAERVQENLNAGVYRTGRLSPKHEIAVAAFQTWVRDAL 342
>gi|305665429|ref|YP_003861716.1| hypothetical protein FB2170_03995 [Maribacter sp. HTCC2170]
gi|88710184|gb|EAR02416.1| hypothetical protein FB2170_03995 [Maribacter sp. HTCC2170]
Length = 362
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 182/365 (49%), Gaps = 34/365 (9%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD----FFSGRIGEVEFV 82
I KA T P+S+Y D +++FYRSW +G+ D + +P + V
Sbjct: 11 ITKAETLPASFYRDSKVFEAIKNKIFYRSWHWLGHQDLVANPLNAHPIVLLDNFMTEPLV 70
Query: 83 VCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
+ RDD KIH NVC H +++ SGK VC YHG + LDG K F
Sbjct: 71 LTRDDEDKIHCLSNVCTHRGNLVVNTSGKAKKLVCGYHGRRFKLDGAFEHMPEFKNAKGF 130
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ E+ WGPF+ + Q+ +D+ N+ +G L +N D L
Sbjct: 131 PRDCDNMHKFELRHWGPFLFAGLNPSFEFQKVIDT---LNQRVG----FLPLN--DFKLD 181
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGS 262
++Y + +W ++CDN+L+ G+H+P+ H L + L +Y T ++E +++Q G
Sbjct: 182 ESRSKDYQVNAHWALYCDNFLE-GFHIPFVHDDLNAVLDYGTYDTIIHEHLNLQ---IGY 237
Query: 263 TEGTDDTHRL-------GSK--AIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVF- 311
EGTD L G K A Y +++PN M N Y PW + N+V PL R KV F
Sbjct: 238 AEGTDAIFDLPEGHVDYGKKIAAYYYWVFPNMMFNFY-PWGLSVNVVQPLGINRTKVSFY 296
Query: 312 DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
Y D S + A S+ D +V+MED + EGVQ+G+ S Y +GR++P+ EQ ++H
Sbjct: 297 SYVYDSSKLNVGA---GSILD--KVEMEDEEVVEGVQKGVRSQFYEAGRFSPTREQGVHH 351
Query: 372 FHSLL 376
FH LL
Sbjct: 352 FHRLL 356
>gi|262194914|ref|YP_003266123.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262078261|gb|ACY14230.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 355
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 168/369 (45%), Gaps = 30/369 (8%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
+P+ P+ +A T P+SWY +P++ E H VF R W ++G+ +L +P + +
Sbjct: 4 SPEQPLARAHTLPASWYHEPAWFQRERHAVFAREWLLLGHEAELLEPGSTRAQCVAGWPI 63
Query: 82 VVCRDDNGKIHAFHNVCRHHASIL----ATGSG---KKSWFVCPYHGWTYGLDGTLLKAT 134
V R +G + FH+VCRH A + A G+ + C YHGW Y G L +
Sbjct: 64 FVRRGSDGSLRGFHDVCRHRAGPIVGLPAPGAATVVQVPHLRCRYHGWLYDEQGKLERTP 123
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ DF+ ++GL L V +W FV M A VD+ LG E+
Sbjct: 124 DFGEVDDFDRSDYGLHALRVESWRGFVFATMDPHA--PPLVDA-------LGRLPEL--T 172
Query: 195 NGID-SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
ID + ++ R +++ CNWK + +NYL+ GYH+PY H L + + +Y +V
Sbjct: 173 ESIDFARFAFHSRVSHSLRCNWKTYVENYLE-GYHIPYVHPQLRREVDVKTYEVVAERRV 231
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
T D + ++A++YPN +N YG + ++P+ P+ ++ + +
Sbjct: 232 VTHHASPRPT-ALDPVY----DGLWAWLYPNAALNVYGDGLSLERMVPVGPSETRIEYLF 286
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
F + + V ED +CE VQR L + Y GR +P E +Y F
Sbjct: 287 FFARGAD-----ADAARAMCAGVTAEDAEICEAVQRNLAAGVYERGRLSPRHEAGVYDFQ 341
Query: 374 SLLHCNLTN 382
L L +
Sbjct: 342 QRLRTALAD 350
>gi|332668185|ref|YP_004450973.1| choline monooxygenase [Haliscomenobacter hydrossis DSM 1100]
gi|332336999|gb|AEE54100.1| Choline monooxygenase [Haliscomenobacter hydrossis DSM 1100]
Length = 365
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 182/374 (48%), Gaps = 32/374 (8%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQD 70
K Y +P I ++A T P+ +Y +P+ +F RSWQ + + L+ P
Sbjct: 6 KFNYTVHPDI--QRAETLPAEFYRNPAVFEAMRDTLFPRSWQWIETGEHLEQNGAVFPFQ 63
Query: 71 FFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTL 130
G + E F+ +D+ G++ F NVC H +IL G VC YHG + L+G +
Sbjct: 64 SIPGFVNEPLFLR-KDNEGQVQCFSNVCTHRGNILVHNPGVYKKLVCNYHGRRFDLNGQM 122
Query: 131 LKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE 190
DF L + A W F +++ Q+ +D L +
Sbjct: 123 EFMPEFKEALDFPRPCDHLTEIPTAFWAQFPFVSLDPAFDFQKVIDV-------LQERNG 175
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
+ + + + R+Y + +W ++CDNYL+G +H+P+ H GL L D+Y T ++
Sbjct: 176 FMPLTQFRYAPEW--SRDYLVNAHWALYCDNYLEG-FHIPFVHPGLNQALDYDAYDTEVF 232
Query: 251 EKVSIQ-RCESGSTEGTD--DTHRLGSKAI---YAFIYPNFMINRYGPW-MDTNLVIPLA 303
E ++Q +TE D + H K + Y +++PN M N Y PW + N+V P++
Sbjct: 233 EYCNLQIGIGDAATECFDLPEGHVDYGKRVAGYYFWVFPNMMFNFY-PWGLSVNIVKPMS 291
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSL-KDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
+CKV F ++ D++ +EQS D ++V+ ED + E VQRG++S Y +GR++
Sbjct: 292 IKQCKVRFIMYVY-----DESKMEQSAGADLDKVEREDEFVVENVQRGIQSRFYQTGRFS 346
Query: 363 PSVEQTMYHFHSLL 376
P E ++HFH LL
Sbjct: 347 PKREACVHHFHRLL 360
>gi|300789380|ref|YP_003769671.1| rieske 2Fe-2S family protein [Amycolatopsis mediterranei U32]
gi|384152873|ref|YP_005535689.1| rieske 2Fe-2S family protein [Amycolatopsis mediterranei S699]
gi|399541260|ref|YP_006553922.1| rieske 2Fe-2S family protein [Amycolatopsis mediterranei S699]
gi|299798894|gb|ADJ49269.1| rieske 2Fe-2S family protein [Amycolatopsis mediterranei U32]
gi|340531027|gb|AEK46232.1| rieske 2Fe-2S family protein [Amycolatopsis mediterranei S699]
gi|398322030|gb|AFO80977.1| rieske 2Fe-2S family protein [Amycolatopsis mediterranei S699]
Length = 373
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 170/370 (45%), Gaps = 18/370 (4%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTDP+ ALE ++F W + L P F + RIG+ +V
Sbjct: 6 LPPSLLATLPGSSYTDPAVFALEQAKIFEADWFCAVRSADLAGPGAFETVRIGKESVLVS 65
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R +G+++AF NVCRH + L T SG K F CPYH WTYGLDG L+ A +TG+ D
Sbjct: 66 RGRDGRLNAFLNVCRHRGARLCTAESGTVKRAFQCPYHAWTYGLDGKLIAAPNLTGMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ EFGL L + W + + + E EE V E LGG +EI GID L+
Sbjct: 126 DRTEFGLTRLHLREWLGYAWVCLADEPPSFEETVVGAV-TERLGGPAEI-DAYGID-GLA 182
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ---R 257
R EY ++ NWK +N+++ YH H L L D Y+ Y +
Sbjct: 183 LGKRIEYDVKANWKQIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGGD 241
Query: 258 CESGSTEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
+ + +G++ RL + YA I P +N + + + PLAP R V
Sbjct: 242 IKGFTVDGSEGVDRLPGVTEAQDRKYYAITIKPGVFVNLVPDHVILHRMFPLAPDRTLVR 301
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
D+ + + + +S++ +V ++D CE Q ++S +Y G E +
Sbjct: 302 CDWLYLPEVVESGRDLTRSVELFHRVNLQDFEACERCQLSMDSRSYTGGGVLVPSEHHIG 361
Query: 371 HFHSLLHCNL 380
FH + L
Sbjct: 362 AFHDWVRARL 371
>gi|406938324|gb|EKD71582.1| hypothetical protein ACD_46C00155G0004 [uncultured bacterium]
Length = 365
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 165/369 (44%), Gaps = 31/369 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD-----FFSGRIGEVEF 81
IE A T PSS+YT + + +VF ++WQ + L+ P G + E
Sbjct: 14 IENASTIPSSFYTSQHWYDITKEKVFTKTWQFCLSNEDLRLPGQIVPFTLLPGLLDE-PI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+ RD + +H NVC H ++L G C YHG + L G + D
Sbjct: 73 LFIRDMDDSLHCISNVCTHRGNLLVDGPCNAQQLRCRYHGRRFKLCGDFIHMPEFEKAND 132
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F L + A G F+ + A +E + WL + N
Sbjct: 133 FPSHNDNLPKVPFAPLGKFLFAAISPTASFEETFNDINKRLAWLPFNEMRFDPNR----- 187
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
R+Y ++ +W ++C+NYL+G H+P+ HK L S L +YST +Y ++Q +
Sbjct: 188 ----SRDYLVKSHWALYCENYLEG-LHIPFVHKSLRSVLDFQAYSTEIYRYSNLQLALAN 242
Query: 262 STEGTDDTHRLGS------KAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVF-DY 313
S E + D R A Y +I+PN M+N Y PW N+V PL KV F Y
Sbjct: 243 SGEDSFDLPRHSQDYGKSVAAYYYWIFPNTMLNFY-PWGCSVNVVKPLGHELSKVSFLTY 301
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
LD S A E ++V+ ED + E VQ+G+ S Y +GRY+P++EQ +HFH
Sbjct: 302 VLDESKIGRGAGGEL-----DKVEREDESVVESVQKGIRSRFYHAGRYSPTMEQGTHHFH 356
Query: 374 SLLHCNLTN 382
LL C N
Sbjct: 357 QLL-CEFLN 364
>gi|297567183|ref|YP_003686155.1| Rieske (2Fe-2S) domain-containing protein [Meiothermus silvanus DSM
9946]
gi|296851632|gb|ADH64647.1| Rieske (2Fe-2S) iron-sulfur domain protein [Meiothermus silvanus
DSM 9946]
Length = 366
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 170/367 (46%), Gaps = 37/367 (10%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD-----FFSGRIGEVEF 81
I +A T P+++Y DP+ +VF R+WQ VG TD LK P G + E
Sbjct: 14 ISQASTLPAAFYKDPAIFERAKEQVFARTWQWVGDTDDLKAPGTVKPFTLLEGFLDE-PL 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
V+ RD + ++H NVC H ++A + C YHG +GLDG G+K
Sbjct: 73 VITRDHDDRLHLLSNVCTHRGMLVAETGDNARYLRCRYHGRRFGLDGCFQAMPEFEGVKG 132
Query: 142 FNVKEFGLVPLEVATW-GPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
F + L + W G F+ ++ D V E L E L +
Sbjct: 133 FPSESDHLPQVPFGLWRGKFLFASL----------DPAVPLEEVLKPIEERLGWLPLQQF 182
Query: 201 LSYLCR-REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
R R+Y + NW ++CDNYL+ G+H+P+ H L + + SY++ +Y+ ++Q
Sbjct: 183 YFEPARARDYLVRANWALYCDNYLE-GFHIPFIHASLNAAIDYGSYTSEIYDWCNLQLGV 241
Query: 260 SGSTE--------GTDDTHRLGSKAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVV 310
+ S E D R+G A Y +++PN M+N Y PW + N+V PL P KV
Sbjct: 242 AASGETAFELPQDSPDYGQRIG--AYYYWVFPNLMLNFY-PWGLSVNVVRPLGPELTKVS 298
Query: 311 F-DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
F Y +L D A + E + E VQ+G++S Y GR++ + EQ +
Sbjct: 299 FLPYVWKPALLDSGAGAGLDRVEREDEVVV-----EAVQKGVKSRFYDRGRFSVAREQGV 353
Query: 370 YHFHSLL 376
+HFH LL
Sbjct: 354 HHFHRLL 360
>gi|346320175|gb|EGX89776.1| Rieske [Cordyceps militaris CM01]
Length = 421
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 163/354 (46%), Gaps = 23/354 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W + + +LK+ D+ I +FV+CRD G I+A
Sbjct: 31 PASWYTSRDMYELERRAIFSRKWLLTTHKLRLKNSGDWLRYEIAGFQFVLCRDRTGSINA 90
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ G F C YHGW+YG++G L KA ++DF+ + GL+P+
Sbjct: 91 FHNVCRHRAFPVVTEEQGNNKVFSCKYHGWSYGMNGKLAKAPGYQDMEDFDKAQNGLLPI 150
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG---SSEILSINGIDSSLSYLCRRE 208
V F+ +NM + + + ++ GG +L N D + E
Sbjct: 151 HVHIDHNGFIWVNMDGKP------EPEIAWDDDFGGVDTQERLLEYNFDDYEFDHAW--E 202
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
E NWK+ DNY + YH AH + S L++Y + + C T +
Sbjct: 203 MEGEYNWKILADNY-NECYHCKVAHPDIPSIADLEAYKVEVKDS-----CIEHYANSTPE 256
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
G K + +PN +N + T +P PT+ + ++ F + DD+AF
Sbjct: 257 QIARGFKVAPTYFFPNASMNVTPNFFFTQRFVPSGPTQSAMKYEVFRHKNA-DDEAFT-- 313
Query: 329 SLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
++ D +++ ED LC QR L + + +G P++E+ F + +T
Sbjct: 314 TINDMYKRIMSEDKYLCINAQRNLSAGVFVNGEMHPTMEKGPLFFQRKIRETVT 367
>gi|33600090|ref|NP_887650.1| [2Fe-2S] protein [Bordetella bronchiseptica RB50]
gi|412339652|ref|YP_006968407.1| [2Fe-2S] protein [Bordetella bronchiseptica 253]
gi|33567688|emb|CAE31602.1| [2Fe-2S] protein [Bordetella bronchiseptica RB50]
gi|408769486|emb|CCJ54263.1| [2Fe-2S] protein [Bordetella bronchiseptica 253]
Length = 383
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 127/234 (54%), Gaps = 14/234 (5%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E+A + P Y DP+F E+ R+F + W +G+ +L P +F+ V +V R
Sbjct: 19 PLEEATSLPPQAYHDPAFYQREIDRIFMKRWNFIGHEGRLAAPGAYFAMDFAGVPIIVSR 78
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
++G++ AF N CRH L G G+ FVCPYHGW+Y +G L A + G F+ K
Sbjct: 79 GEDGQVRAFANSCRHRGVRLVNGEGQGRAFVCPYHGWSYAGNGELRAAPGMEGTHCFDRK 138
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ GL+P+ + GPF+ +N + D+ +A++ LG + +G+D L
Sbjct: 139 DNGLLPVRLEKLGPFMWVNF--------DPDAAPLASQ-LGDLPSKIESHGLD-ELVLTR 188
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
R EY ++CNWKV+ +N++D YH P HK + L S S + V++++C+
Sbjct: 189 RAEYQVKCNWKVYVENFMD-YYHTPTVHK---NSLARGSLSVYHRKPVALEQCD 238
>gi|427820882|ref|ZP_18987945.1| [2Fe-2S] protein [Bordetella bronchiseptica D445]
gi|410571882|emb|CCN20131.1| [2Fe-2S] protein [Bordetella bronchiseptica D445]
Length = 383
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 127/234 (54%), Gaps = 14/234 (5%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E+A + P Y DP+F E+ R+F + W +G+ +L P +F+ V +V R
Sbjct: 19 PLEEATSLPPQAYHDPAFYQREIDRIFMKRWNFIGHEGRLAAPGAYFAMDFAGVPIIVSR 78
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
++G++ AF N CRH L G G+ FVCPYHGW+Y +G L A + G F+ K
Sbjct: 79 GEDGQVRAFANSCRHRGVRLVNGEGQGRAFVCPYHGWSYAGNGDLRAAPGMEGTHCFDRK 138
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ GL+P+ + GPF+ +N + D+ +A++ LG + +G+D L
Sbjct: 139 DNGLLPVRLEKLGPFMWVNF--------DPDAAPLASQ-LGDLPSKIESHGLD-ELVLTR 188
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
R EY ++CNWKV+ +N++D YH P HK + L S S + V++++C+
Sbjct: 189 RAEYQVKCNWKVYVENFMD-YYHTPTVHK---NSLARGSLSVYHRKPVALEQCD 238
>gi|427823530|ref|ZP_18990592.1| [2Fe-2S] protein [Bordetella bronchiseptica Bbr77]
gi|410588795|emb|CCN03855.1| [2Fe-2S] protein [Bordetella bronchiseptica Bbr77]
Length = 383
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 127/234 (54%), Gaps = 14/234 (5%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E+A + P Y DP+F E+ R+F + W +G+ +L P +F+ V +V R
Sbjct: 19 PLEEATSLPPQAYHDPAFYQREIDRIFMKRWNFIGHEGRLAAPGAYFAMDFAGVPIIVSR 78
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
++G++ AF N CRH L G G+ FVCPYHGW+Y +G L A + G F+ K
Sbjct: 79 GEDGQVRAFANSCRHRGVRLVNGEGQGRAFVCPYHGWSYAGNGDLRAAPGMEGTHCFDRK 138
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ GL+P+ + GPF+ +N + D+ +A++ LG + +G+D L
Sbjct: 139 DNGLLPVRLEKLGPFMWVNF--------DPDAAPLASQ-LGDLPAKIESHGLD-ELVLTR 188
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
R EY ++CNWKV+ +N++D YH P HK + L S S + V++++C+
Sbjct: 189 RAEYQVKCNWKVYVENFMD-YYHTPTVHK---NSLARGSLSVYHRKPVALEQCD 238
>gi|410418845|ref|YP_006899294.1| [2Fe-2S] protein [Bordetella bronchiseptica MO149]
gi|408446140|emb|CCJ57806.1| [2Fe-2S] protein [Bordetella bronchiseptica MO149]
Length = 383
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 14/234 (5%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E+A + P Y DP+F E+ R+F + W +G+ +L P +F+ V +V R
Sbjct: 19 PLEEATSLPPQAYHDPAFYQREIDRIFMKRWNFIGHEGRLAAPGAYFAMDFAGVPIIVSR 78
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
++G++ AF N CRH L G G+ FVCPYHGW+Y +G L A + G F+ K
Sbjct: 79 GEDGQVRAFANSCRHRGVRLVNGEGQGRAFVCPYHGWSYAGNGDLRAAPGMEGTHCFDRK 138
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ GL+P+ + GPF+ +N + D+ +A++ LG + +G+D L
Sbjct: 139 DNGLLPVRLEKLGPFMWVNF--------DPDAAPLASQ-LGDLPSKIESHGLD-ELVLTR 188
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
R EY ++CNWKV+ +N++D YH P H+ + L S S + V++++C+
Sbjct: 189 RAEYQVKCNWKVYVENFMD-YYHTPTVHR---NSLARGSLSVYHRKPVALEQCD 238
>gi|336252806|ref|YP_004595913.1| Choline monooxygenase [Halopiger xanaduensis SH-6]
gi|335336795|gb|AEH36034.1| Choline monooxygenase [Halopiger xanaduensis SH-6]
Length = 383
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 172/372 (46%), Gaps = 55/372 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP+ +E +VF R W G+ + + D D+F+ IG+ E +V R +G I A
Sbjct: 30 PARYFTDPAVHEMEKEKVFGRYWVYAGHANCIPDAGDYFTRNIGDREIIVVRTHDGDIEA 89
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL------LKATRIT----- 137
F+NVC H S + T G CPYH WTY LDG+L + R+
Sbjct: 90 FYNVCAHRGSAMVEETPMTDPGNAGRIKCPYHLWTYDLDGSLASTPKSFEDARLNPDLED 149
Query: 138 -GIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ + + +E L+ + GPFV +N + + EE S +
Sbjct: 150 EDVSEPDAEENALMSVHTDRIGPFVFVNFADDPMPLEE-----------QAGSMKTELES 198
Query: 197 IDSSLSYLCRREYT-IECNWKVFCDNYLDGGYHVPYAHKG-------LASGLQLDSYSTS 248
+ +L RR + +ECNWKVF NY + H H+ L S L+++ Y
Sbjct: 199 LPLEEYHLARRIVSEVECNWKVFGGNYSECD-HCQANHQDWVRDLELLDSELEVNDYHWI 257
Query: 249 LYEKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAP 304
L+ + E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 258 LHYQ---------HKEDVDDEMRIHDEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDE 308
Query: 305 TRCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
R ++V D YF D L +++A + ++ S Q+Q ED L E QRGLES A + P
Sbjct: 309 GRFQLVADYYFADADLSEEEA---EFVRTSRQLQEEDFELVERQQRGLESGAIAQAQLGP 365
Query: 364 SVEQTMYHFHSL 375
+ E T++ H L
Sbjct: 366 N-EHTVHKLHRL 376
>gi|448366868|ref|ZP_21554899.1| Choline monooxygenase [Natrialba aegyptia DSM 13077]
gi|445653777|gb|ELZ06637.1| Choline monooxygenase [Natrialba aegyptia DSM 13077]
Length = 379
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 169/371 (45%), Gaps = 53/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP+ +E +VF R W G+ + + + D+F+ IG+ E +V R+ +G I A
Sbjct: 26 PARYFTDPAVHEMEKEKVFGRYWVYAGHANCIPEAGDYFTRTIGDREIIVLRNHDGDIQA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T CPYH WTY LDG L R
Sbjct: 86 FYNVCAHRGSAIVEETPMTDPDNARRIQCPYHLWTYDLDGDLASTPRSFEEARLNPDLDD 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ D + +E L+ + GPFV +N D +A + SE+ S+
Sbjct: 146 EDVPDLDAEENSLMEVHSDRIGPFVFVNFAD--------DPMSLAEQAGKLKSELESLPL 197
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKG-------LASGLQLDSYSTSL 249
+ L+ E +ECNWKVF NY + H H+ L S L+++ Y L
Sbjct: 198 AEYELAQRIVSE--VECNWKVFGGNYSECD-HCQANHQDWVTDLELLDSELEVNDYHWVL 254
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 255 HYK---------HREDVDDEMRIHDEHEAQFHYFWPNFTVNMYGTADGYGTYIIDPIDEE 305
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R ++V D YF D L D++ EQ ++ S Q+Q ED L E QRGL S A + P+
Sbjct: 306 RFQLVADYYFKDPELTDEE---EQFIRTSRQLQEEDFELVERQQRGLTSGAIAQAQLGPN 362
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 363 -EHTVHKLHRL 372
>gi|78061379|ref|YP_371287.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969264|gb|ABB10643.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 387
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 184/394 (46%), Gaps = 37/394 (9%)
Query: 4 SSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTD 63
S +++VAA + + Q E+ALT PS ++ D + A E R+F +W V+G+T
Sbjct: 5 SVVKKQDIVAADRWM-----QQRPERALTLPSRYFYDDAVFAAERDRIFMSAWHVIGHTS 59
Query: 64 QLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASIL--ATGSGKKSWFVCPYHG 121
+L P F + + + +GK+HAFHNVC+H + L A +K F C YH
Sbjct: 60 ELSTPGQFVMTDVFDQSVIAACGRDGKVHAFHNVCQHRGNRLVEARRGEQKGLFRCAYHS 119
Query: 122 WTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA 181
W YG DG+L A R ++DF++ + + + V +G F N+ +A ++
Sbjct: 120 WCYGADGSLRGAPRTDRVEDFDLAAYNIPKVRVEEFGGFYYFNLDPDAPSMRDL------ 173
Query: 182 NEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYA---HKGLAS 238
+ G +E+ + + + ++ + NWKV DN ++ GYH + H LA
Sbjct: 174 --FPGADAEMKRVFPKLDAYRLIEEKDVIVPANWKVIMDNSIE-GYHFSLSGPHHVELAG 230
Query: 239 GLQLDSYSTSLYEK----VSIQRCESGSTEGTDDTHRLGSKAIYAF-IYPN--FMINRYG 291
+ Y + ++K ++ ++ + G + + + I+P+ F Y
Sbjct: 231 LIDFAGYRLTQHDKWWTYIAPANRDATAAYGVPLGDKNPDECFFNIGIWPHNTFYTFPYS 290
Query: 292 PWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM--EDIILCEGVQR 349
++ T L+IPL P + + F Y+ S D + ++ D + EDI L VQ+
Sbjct: 291 EFLATFLIIPLEPEKTLLRFGYY---STHDTVPAVTKACMDWMNTDLGPEDIRLNISVQK 347
Query: 350 GLESPAYCSGRYAPSVEQT------MYHFHSLLH 377
GL S Y GRY +++ ++HFH+L+H
Sbjct: 348 GLHSVGYNQGRYVIDAQRSNESEHLVHHFHTLVH 381
>gi|340356132|ref|ZP_08678797.1| Rieske (2Fe-2S) domain protein [Sporosarcina newyorkensis 2681]
gi|339621762|gb|EGQ26304.1| Rieske (2Fe-2S) domain protein [Sporosarcina newyorkensis 2681]
Length = 364
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 169/357 (47%), Gaps = 27/357 (7%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P + +TDPS L E +F +SWQ+VG+ Q++ FF+ IG+ ++ R + +
Sbjct: 17 TMPYNLFTDPSVLEKEKELIFAKSWQLVGHVSQVEKKGAFFTAEIGDDPIIIIRGTDEVL 76
Query: 92 HAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN-VKEFGL 149
AF+NVC H A+ L + SGKK C YHGWT+ DG L KA +D V++ L
Sbjct: 77 RAFYNVCPHRATKLEKSDSGKKKILQCSYHGWTFKTDGALNKAPNFRSEEDAACVQDACL 136
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
+ + + +N+ D+ E G + L +L + R+
Sbjct: 137 RSVRMEVIESLIFVNLD---------DNAKPLAESYGDFFDRLGKFEFLKNLQFTHRKSR 187
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ----RCESGSTEG 265
I+ NWK F +NYL+ H AH L +D Y E SIQ + + E
Sbjct: 188 HIKANWKAFIENYLECD-HCHVAHPSFIDTLDMDDYQIITCENYSIQGSMVKPDKQYGEV 246
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRY-GPW-MDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
D + + + +++PN M+ Y GP M T ++P+ ++V+ Y+ +D
Sbjct: 247 NLDEAEMQGGSFF-WLWPNLMLTIYPGPANMATIQLVPIDHENTEIVYTYYFS---EDSL 302
Query: 324 AFIEQSLKD----SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ Q KD +EQV+ EDI L E Q G +S A+ GRY+ S EQ + FH ++
Sbjct: 303 EKLTQEEKDLMTFAEQVRFEDIELVELEQLGFKSRAFEKGRYSQS-EQAIVQFHEMV 358
>gi|169766248|ref|XP_001817595.1| Rieske 2Fe-2S family protein [Aspergillus oryzae RIB40]
gi|83765450|dbj|BAE55593.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 418
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 155/353 (43%), Gaps = 32/353 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W + ++ +LK+ D+ + +FV+ RD G I+A
Sbjct: 31 PASWYTAQEMYELERRAIFSRRWLFITHSSRLKEAGDWLRYEVAGFDFVINRDRQGNINA 90
Query: 94 FHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
FHNVCRH A I G G K C YHGW+YGL+G L KA + F+ ++ GL
Sbjct: 91 FHNVCRHRAYPVIEEEGCGNKKIIACRYHGWSYGLNGKLAKAPGYQELDGFDKEKNGLFR 150
Query: 152 LEVAT-WGPFVLLNMGKEAV-------HQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ V F+ +NM + V H E+VD E NGI+ Y
Sbjct: 151 IHVKVDVNGFIWVNMDAKEVPEVPWEEHFEDVDKQARYKE-----------NGINFE-EY 198
Query: 204 LCRREYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
Y +E NWK+ DN+ + YH P H + + L LDS+ + + + C+S
Sbjct: 199 EFDHTYQMEGDYNWKILADNF-NECYHCPTTHADIPAFLNLDSFDSDVKDGHIQHHCKS- 256
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
T + + G + +PN + WM +P P R + ++ + K+
Sbjct: 257 ----TPEQIQKGLNTASTYYFPNSSMTVTKHWMMVQKFLPKGPNRSTMAYEIWRHKDAKE 312
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ + + +V ED +LC Q+ L + +G P E+ F S
Sbjct: 313 EDFKLINDM--YARVMGEDKVLCNNAQKNLNRGVFVNGELHPKYEKAPLFFQS 363
>gi|357010040|ref|ZP_09075039.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus elgii B69]
Length = 355
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 160/348 (45%), Gaps = 17/348 (4%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P YTDP L LE ++F ++W VG+T Q+ P D+F+ +V RD +G +
Sbjct: 16 TLPYYLYTDPRILELEKEKIFSKAWNYVGHTSQVAKPGDYFTCEATGEPIIVVRDQDGTL 75
Query: 92 HAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
AF+NVC H A+ L +G K C YHGWT+ L+G L KA DF L
Sbjct: 76 RAFYNVCPHRATKLEKETAGHKKILQCSYHGWTFQLNGQLHKAPNFKESDDFCSGAHCLK 135
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ V T + +N+ + A E ++ E + G L ++
Sbjct: 136 SVRVETQASLIFVNLDENAAPLAETYADFF---------EDIGQFGFLGKLKKHEVKQRI 186
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
I+CNWK F DN+L+ H P AH G + L + Y+ +IQ + D
Sbjct: 187 IKCNWKAFIDNFLECD-HCPIAHPGFVATLDMSKYNIINGPYCNIQGSSVKQSRSDYDDA 245
Query: 271 RLGSKAIYAFIYPNFMINRY-GPW-MDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
+ Y +I+PN M Y GP + T + P+ V+ FL+G +K ++
Sbjct: 246 EVKEGRFY-WIWPNVMYTVYPGPGNLSTIQMFPVDHETTLGVYTVFLEGDEPTEKQ--KE 302
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
L ++QV+ ED+ + E Q G S A+ G +P+ E ++HF L+
Sbjct: 303 LLAFTDQVRKEDVEIVELEQIGFNSRAFSQGICSPT-EHGVHHFAQLV 349
>gi|448364066|ref|ZP_21552660.1| Choline monooxygenase [Natrialba asiatica DSM 12278]
gi|445644954|gb|ELY97961.1| Choline monooxygenase [Natrialba asiatica DSM 12278]
Length = 379
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 168/371 (45%), Gaps = 53/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDPS +E +VF R W G+ + + + D+F+ IG+ E +V R+ +G I A
Sbjct: 26 PARYFTDPSVHEMEKEKVFGRYWVYAGHANCIPEAGDYFTRTIGDREIIVLRNHDGDIQA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T CPYH WTY LDG L R
Sbjct: 86 FYNVCAHRGSAIVEETPMTDPDNARRIQCPYHLWTYDLDGDLASTPRSFEEARLNPDLED 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ D + L+ + GPFV +N D +A + SE+ S+
Sbjct: 146 EDVPDLDADSNSLMDVHSDRIGPFVFVNFA--------ADPMPLAEQAGKLKSELESLPL 197
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKG-------LASGLQLDSYSTSL 249
+ L+ E +ECNWKVF NY + H H+ L S L+++ Y L
Sbjct: 198 AEYELAQRIVSE--VECNWKVFGGNYSECD-HCQANHQDWVTDLELLDSELEVNDYHWVL 254
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 255 HYK---------HREDVDDEMRIHDEHEAQFHYFWPNFTVNMYGTADGYGTYIIDPIDEE 305
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R ++V D YF D L D++ EQ ++ S Q+Q ED L E QRGL+S A + P+
Sbjct: 306 RFQLVADYYFKDPELTDEE---EQFIRTSRQLQEEDFELVERQQRGLKSGAIAQAQLGPN 362
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 363 -EHTVHKLHRL 372
>gi|388457231|ref|ZP_10139526.1| choline monooxygenase [Fluoribacter dumoffii Tex-KL]
Length = 362
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 167/368 (45%), Gaps = 29/368 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLK-----DPQDFFSGRIGEVEF 81
I KA T P+ +YT P + A ++F R+WQ + L+ P G + E
Sbjct: 10 IAKASTIPAHFYTSPEWFAQAKEKIFARTWQFCCSMESLRLEGQLVPFTLLPGLLDEPLL 69
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
V RD+ + NVC H +IL C YHG + L G LL +
Sbjct: 70 FV-RDEQDRFRCLSNVCTHRGNILIEAPCTAEKIKCSYHGRRFNLCGELLHMPEFERTCN 128
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F + L + PF+ ++ +A +E WL + +DS+
Sbjct: 129 FPSAKDNLPQIPSDCLDPFLFASLDPQASFKEVFAEIKERLFWLP-----MQHMRLDSTR 183
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
S R+Y ++ +W ++C+NYL+ H+P+ H L + +Y+T LY ++Q +
Sbjct: 184 S----RDYLVKAHWALYCENYLEA-LHIPFVHPSLRKVIDCTTYTTELYRYCNLQLALAS 238
Query: 262 STEGTDDTHR----LGSK--AIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDYF 314
E + D + G K A Y +I+PN M+N Y PW N+V PL P KV F F
Sbjct: 239 PGEESFDLPKDSIDYGKKVAAYYYWIFPNTMLNFY-PWGCSVNVVKPLGPELTKVSFLTF 297
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ D+ + + D ++V+ ED + E VQRG+ S Y SGR++P+ EQ +HF
Sbjct: 298 V----LDESRLGKGAGGDLDKVEREDEAVVESVQRGIRSRFYESGRFSPTKEQGTHHFQR 353
Query: 375 LLHCNLTN 382
LL C N
Sbjct: 354 LL-CEFLN 360
>gi|448351112|ref|ZP_21539921.1| Choline monooxygenase [Natrialba taiwanensis DSM 12281]
gi|445634796|gb|ELY87970.1| Choline monooxygenase [Natrialba taiwanensis DSM 12281]
Length = 379
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 169/371 (45%), Gaps = 53/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP+ +E +VF R W G+ + + + D+F+ IG+ E +V R+ +G I A
Sbjct: 26 PARYFTDPAVHEMEKEKVFGRYWVYAGHANCIPEAGDYFTRTIGDREIIVLRNHDGDIQA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T CPYH WTY LDG L R
Sbjct: 86 FYNVCAHRGSAIVEETPMTDPDNARRIQCPYHLWTYDLDGDLASTPRSFEEARLNPDLND 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ D + +E L+ + GPFV +N D +A + SE+ S+
Sbjct: 146 EDVPDLDAEENSLMEVHSDRIGPFVFVNFAD--------DPMSLAEQAGKLKSELESLPL 197
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKG-------LASGLQLDSYSTSL 249
+ L+ E +ECNWKVF NY + H H+ L S L+++ Y L
Sbjct: 198 AEYELAQRIVSE--VECNWKVFGGNYSECD-HCQANHQDWVTDLELLDSELEVNDYHWVL 254
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 255 HYK---------HREDVDDEMRIHDEHEAQFHYFWPNFTVNMYGTADGYGTYIIDPIDEE 305
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R ++V D YF D L D++ E+ ++ S Q+Q ED L E QRGL S A + P+
Sbjct: 306 RFQLVADYYFKDPELTDEE---ERFIRTSRQLQEEDFELVERQQRGLTSGAIAQAQLGPN 362
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 363 -EHTVHKLHRL 372
>gi|400599552|gb|EJP67249.1| naphthalene 1,2-dioxygenase subunit alpha [Beauveria bassiana ARSEF
2860]
Length = 422
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 23/340 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W + + +LK+ D+ I +FV+CRD G I+A
Sbjct: 31 PASWYTSRDMYELERRAIFSRKWLLTTHKLRLKESGDWLRYEIAGFQFVICRDRTGSINA 90
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN+CRH A ++ G F C YHGW+YG++G L KA ++DF+ + GL+P+
Sbjct: 91 FHNICRHRAFPVVTEQQGNNKVFACKYHGWSYGMNGKLAKAPGYQDMEDFDKSQNGLLPI 150
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG---SSEILSINGIDSSLSYLCRRE 208
V F+ +NM + + D N GG N D + E
Sbjct: 151 HVHIDHNGFIWVNMDGKPTPEVAWDDN------FGGVDTQERFEEYNFDDYEFDHAWEME 204
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
E NWK+ DNY + YH AH + S L++Y + + S T +
Sbjct: 205 --GEYNWKILADNY-NECYHCKVAHPDIPSIADLEAYKVEVKDSYIEHYANS-----TPE 256
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
G K + +PN +N + T +P+ PT+ + ++ F + D++AF
Sbjct: 257 QIARGFKVAPTYFFPNASMNVTPNFFFTQRFVPIGPTQSAMKYEVFRHKNA-DNEAFT-- 313
Query: 329 SLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ D +++ ED LC Q+ L + + +G P++E+
Sbjct: 314 VINDMYKRIMSEDKYLCINAQKNLSAGVFINGEMHPTMEK 353
>gi|427813331|ref|ZP_18980395.1| [2Fe-2S] protein [Bordetella bronchiseptica 1289]
gi|410564331|emb|CCN21876.1| [2Fe-2S] protein [Bordetella bronchiseptica 1289]
Length = 383
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 14/234 (5%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E+A + P Y P+F E+ R+F + W +G+ +L P +F+ V +V R
Sbjct: 19 PLEEATSLPPQAYHAPAFYQREIDRIFMKRWNFIGHEGRLAAPGAYFAMDFAGVPIIVSR 78
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
++G++ AF N CRH L G G+ FVCPYHGW+Y +G L A + G F+ K
Sbjct: 79 GEDGQVRAFANSCRHRGVRLVNGEGQGRAFVCPYHGWSYAGNGELRAAPGMEGTHCFDRK 138
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ GL+P+ + GPF+ +N + D+ +A++ LG + +G+D L
Sbjct: 139 DNGLLPVRLEKLGPFMWVNF--------DPDAAPLASQ-LGDLPSKIESHGLD-ELVLTR 188
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
R EY + CNWKV+ +N++D YH P HK + L S S + V++++C+
Sbjct: 189 RAEYQVRCNWKVYVENFMD-YYHTPTVHK---NSLARGSLSVYHRKPVALEQCD 238
>gi|291295109|ref|YP_003506507.1| choline monooxygenase [Meiothermus ruber DSM 1279]
gi|290470068|gb|ADD27487.1| Choline monooxygenase [Meiothermus ruber DSM 1279]
Length = 362
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 165/375 (44%), Gaps = 38/375 (10%)
Query: 19 YEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD-----FFS 73
+E +P I +A T P+ +Y DP +VF RSWQ VG TD LK P
Sbjct: 4 FEVHPDI--AQASTLPARFYQDPQVYEAVKEKVFARSWQWVGDTDDLKAPGTVKPFTLLE 61
Query: 74 GRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKA 133
G + E V+ RD ++H NVC H ++A + C YHG +GLDG
Sbjct: 62 GCLDE-PLVLTRDHQDQLHLLSNVCTHRGMLVAETGDNARYLRCRYHGRRFGLDGCFQAM 120
Query: 134 TRITGIKDFNVKEFGLVPLEVATW--GPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI 191
G+ F + L + TW G F+ ++ QE + W+
Sbjct: 121 PEFEGVVGFPSPKDDLPRVAFETWGQGKFLFASLNPPVSLQEVLRPVQERVGWMPFREFY 180
Query: 192 LSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE 251
R+Y + NW ++CDNYL+ G+H+PY H L S + SY+T +Y+
Sbjct: 181 FEPARA---------RDYLVRANWALYCDNYLE-GFHIPYIHASLNSVIDYGSYTTEVYD 230
Query: 252 KVSIQ--------RCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPW-MDTNLVIPL 302
++Q C + D R+ A Y +++PN M+N Y PW + N+V PL
Sbjct: 231 WCNLQLGVAAPGEPCFDLPKDSPDHGQRIA--AYYYWVFPNLMLNFY-PWGLSVNVVRPL 287
Query: 303 APTRCKVVF-DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
P KV F Y D S + A + E + E VQ+G++S Y GR+
Sbjct: 288 GPELTKVSFLPYVWDASKLEAGAGAALDRVEREDEVVV-----EAVQKGVKSRFYDRGRF 342
Query: 362 APSVEQTMYHFHSLL 376
+ EQ ++HFH LL
Sbjct: 343 SVKREQGVHHFHRLL 357
>gi|399051786|ref|ZP_10741529.1| ring-hydroxylating dioxygenase, large terminal subunit
[Brevibacillus sp. CF112]
gi|398050358|gb|EJL42729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Brevibacillus sp. CF112]
Length = 365
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 45/364 (12%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P YTDP L E ++F RSWQ VG+ Q+++P DFF+ + +V R G +
Sbjct: 17 TLPYRLYTDPEVLRAEQEKIFARSWQFVGHISQVENPGDFFTCDVAGEPILVVRGREGTL 76
Query: 92 HAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
AF+NVC H A+ L G K C YHGWT+ LDG+L KA + E L
Sbjct: 77 RAFYNVCPHRATKLEKNAEGNKKILQCGYHGWTFQLDGSLNKAPNFKNGEQLCAAEACLR 136
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ + + +N+ +AV + A+ L+ L
Sbjct: 137 QVRLEVQASLIFVNLDDDAVPLAASYGDFFAD---------LAAFPFLGELKKYSVNTRV 187
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT--DD 268
I+ NWK F DNYL+ H P AH G + L L Y I +CE+ S +GT
Sbjct: 188 IKSNWKAFIDNYLECD-HCPIAHPGFTATLDLTKY--------QIIQCENYSVQGTVVKP 238
Query: 269 THRLGSKAI---------YAFIYPNFMINRY-GPW-MDTNLVIPLAPTRCKVVFDYF--- 314
+LGS + + +++PN M+ Y GP M ++P+ V+ Y
Sbjct: 239 DKQLGSVELNKAEMQGGRFYWLWPNLMLTIYPGPGNMSLIQMVPIDHETTLGVYTYLFRH 298
Query: 315 --LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
L KD AF +EQV++ED+ L E Q G +S A+ G+++ + E + F
Sbjct: 299 DELTQEEKDLMAF-------TEQVRVEDVELVELEQIGFKSRAFQKGKFS-ATEHAVLQF 350
Query: 373 HSLL 376
H ++
Sbjct: 351 HEMV 354
>gi|433542569|ref|ZP_20498995.1| Rieske (2Fe-2S) domain-containing protein [Brevibacillus agri
BAB-2500]
gi|432186139|gb|ELK43614.1| Rieske (2Fe-2S) domain-containing protein [Brevibacillus agri
BAB-2500]
Length = 365
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 45/364 (12%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P YTDP L E ++F RSWQ VG+ Q+++P DFF+ + +V R G +
Sbjct: 17 TLPYRLYTDPEVLRAEQEKIFARSWQFVGHISQVENPGDFFTCDVAGEPILVVRGREGTL 76
Query: 92 HAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
AF+NVC H A+ L G K C YHGWT+ LDG+L KA + E L
Sbjct: 77 RAFYNVCPHRATKLEKNAEGNKKILQCGYHGWTFQLDGSLNKAPNFKNGEQLCAAEACLR 136
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ + + +N+ +AV + A+ L+ L
Sbjct: 137 QVRLEVQASLIFVNLDDDAVPLAASYGDFFAD---------LAAFPFLGELKKYSVNTRV 187
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT--DD 268
I+ NWK F DNYL+ H P AH G + L L Y I +CE+ S +GT
Sbjct: 188 IKSNWKAFIDNYLECD-HCPIAHPGFTATLDLTKY--------QIIQCENYSVQGTVVKP 238
Query: 269 THRLGSKAI---------YAFIYPNFMINRY-GPW-MDTNLVIPLAPTRCKVVFDYF--- 314
+LGS + + +++PN M+ Y GP M ++P+ V+ Y
Sbjct: 239 DKQLGSVELNKAEMQGGRFYWLWPNLMLTIYPGPGNMSLIQMVPIDHETTLGVYTYLFRH 298
Query: 315 --LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
L KD AF +EQV++ED+ L E Q G +S A+ G+++ + E + F
Sbjct: 299 DELTQEEKDLMAF-------TEQVRVEDVELVELEQIGFKSRAFQKGKFS-ATEHAVLQF 350
Query: 373 HSLL 376
H ++
Sbjct: 351 HEMV 354
>gi|424067895|ref|ZP_17805351.1| ring hydroxylating dioxygenase, alpha subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
gi|424072483|ref|ZP_17809904.1| ring hydroxylating dioxygenase, alpha subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
gi|407997445|gb|EKG37882.1| ring hydroxylating dioxygenase, alpha subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
gi|407999616|gb|EKG39997.1| ring hydroxylating dioxygenase, alpha subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
Length = 386
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 160/343 (46%), Gaps = 27/343 (7%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
+ T P+ Y D E+ VF R+WQ V + L + D+ +G +V RD +G
Sbjct: 21 SFTLPNEHYIDNQLFDREMEAVFARTWQYVCHISALPNAGDYRVRDLGRRSALVVRDKDG 80
Query: 90 KIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
+ AFHNVC+H A L GSG CPYH W Y G L+ A + +KDF E
Sbjct: 81 TLQAFHNVCQHRAHRLVEGSGHVPGLLTCPYHAWAYNTRGQLISARKSEHLKDFRTDEVQ 140
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWL--GGSSEILSINGIDSSLSYLCR 206
L + + + F+ +N D N + L G + I + + L +
Sbjct: 141 LKQVRLEVFCGFIFINF----------DWNAQPMQALLPGLEASIRTFSPAPEQLFHAYS 190
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTSLYEKVSIQ-RCESGSTE 264
REY ++ NWKV +NY + YH P H L++ L L SY +++E +SG +
Sbjct: 191 REYGVQSNWKVSVENYSE-CYHCPMCHPTLSTATLNLKSYHLAIHEHYHAHISSDSGVNQ 249
Query: 265 G---TDDTHRLGSKAIYA-FIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
G D+ R S+ A +++PNF + Y G +M+ +P++ + V ++F +
Sbjct: 250 GYTMKQDSAR--SREFGAWYLWPNFCLEVYPGGYMNVLHHLPISVDKTLQVVEWFCTAAT 307
Query: 320 KDDKAFIEQSLKDSEQV-QMEDIILCEGVQRGLESPAYCSGRY 361
+ EQ + D V + EDI LC VQRGL S Y GR+
Sbjct: 308 PSPE---EQEVIDFVAVIREEDIPLCASVQRGLNSDGYQQGRF 347
>gi|197104420|ref|YP_002129797.1| phenylpropionate dioxygenase [Phenylobacterium zucineum HLK1]
gi|196477840|gb|ACG77368.1| phenylpropionate dioxygenase [Phenylobacterium zucineum HLK1]
Length = 337
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 154/341 (45%), Gaps = 30/341 (8%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y L + R+ R+WQ VG+ L+ D+ + IG VV R+D G + AFHNV
Sbjct: 7 YRGEEALKADRARILRRTWQFVGHVSMLQSRGDYIADVIGGAPVVVVRNDGG-LAAFHNV 65
Query: 98 CRHHAS-ILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH A ++ G+G F C YHGW Y LDG L A F+ ++FGL P+ V
Sbjct: 66 CRHRAGGLVPDGTGNCGEHFTCRYHGWKYALDGRLRSAVDFGAAPGFDPRQFGLYPIRVE 125
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
TW V +N+ A ++ + + W ++ L G+ RR + I CNW
Sbjct: 126 TWRGMVFVNLDVAAAPLADLMAP-LDRRW----ADDLPQFGLTE------RRTHHIACNW 174
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGS- 274
K + +NYL+ GYH+P H + + Y + ++ + R GS
Sbjct: 175 KTYVENYLE-GYHLPMVHPEFDEDIVVADYRVEIEGEIVFHAAPA----------RDGSV 223
Query: 275 -KAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDS 333
++A+++PN IN Y + P ++ + YF D + A + + S
Sbjct: 224 NAGLWAWMWPNLAINTYRHGYMVERMTATGPESTRLDYFYFFDPA---RAAELAEMFVVS 280
Query: 334 EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++V +D +CE VQR L + Y G +P E + F S
Sbjct: 281 DRVTAQDKEICEMVQRNLAAGVYRPGVLSPKHEAGIAWFQS 321
>gi|238482951|ref|XP_002372714.1| Rieske 2Fe-2S family protein, putative [Aspergillus flavus
NRRL3357]
gi|220700764|gb|EED57102.1| Rieske 2Fe-2S family protein, putative [Aspergillus flavus
NRRL3357]
gi|391873815|gb|EIT82822.1| phenylpropionate dioxygenase [Aspergillus oryzae 3.042]
Length = 418
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 154/353 (43%), Gaps = 32/353 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W + ++ +LK+ D+ + +FV+ RD G I+A
Sbjct: 31 PASWYTAQEMYELERRAIFSRRWLFITHSSRLKEAGDWLRYEVAGFDFVINRDRQGNINA 90
Query: 94 FHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
FHNVCRH A I G G K C YHGW+YGL+G L KA + F+ ++ GL
Sbjct: 91 FHNVCRHRAYPVIEEEGCGNKKIIACRYHGWSYGLNGKLAKAPGYQELDGFDKEKNGLFR 150
Query: 152 LEVAT-WGPFVLLNMGKEAV-------HQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ V F+ +NM + V H E+VD E NGI+ Y
Sbjct: 151 IHVKVDVNGFIWVNMDAKEVPEVPWEEHFEDVDKQARYKE-----------NGINFE-EY 198
Query: 204 LCRREYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
Y +E NWK+ DN+ + YH P H + + L LDS+ + + + C+S
Sbjct: 199 EFDHTYQMEGDYNWKILADNF-NECYHCPTTHADIPAFLNLDSFDSDVKDGHIQHHCKS- 256
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
T + + G + +PN + WM +P P + ++ + K+
Sbjct: 257 ----TPEQIQKGLNTASTYYFPNSSMTVTKHWMMVQKFLPKGPNHSTMAYEIWRHKDAKE 312
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ + + +V ED +LC Q+ L + +G P E+ F S
Sbjct: 313 EDFRLINDM--YARVMGEDKVLCNNAQKNLNRGVFVNGELHPKYEKAPLFFQS 363
>gi|293605918|ref|ZP_06688288.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815705|gb|EFF74816.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 388
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 163/358 (45%), Gaps = 20/358 (5%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E A T P+++YT S E +VF R W V + +L +P D+ + I VV RD
Sbjct: 15 ENAWTLPAAYYTRQSVFDFEKEQVFARQWLCVAHRSELAEPNDYVTREIIGESIVVLRDR 74
Query: 88 NGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G + AF+NVC H L GSG+ K+ CPYH WT+ LDG L A + +F+
Sbjct: 75 EGVLRAFYNVCPHRGHQLLQGSGRAKNVITCPYHAWTFKLDGELAYARNCDNVPNFDKNS 134
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L P++ +G FV +NM + D+ + ++ G + + + + L R
Sbjct: 135 ATLAPIQAVEYGGFVFINM--------DPDAAPIQDQLPGLEARLRAACPVIDQLHLGAR 186
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
NWK+ DNYL+ YH H A +Q++ Y+ +++ ++Q + S+E +
Sbjct: 187 FVTQTPANWKLIVDNYLE-CYHCGPVHPSFADSVQVEHYTHTMHGNWTLQMGLARSSEKS 245
Query: 267 DDTHRLGSKAIYA--FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLK 320
+A + +P M N P D VI P V YFL+ L
Sbjct: 246 FKVDASVKDPSFAGFWAWPCTMFN-VPPGADFMTVIYEFPASADVTLQHYDIYFLNKELT 304
Query: 321 DDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQTMYHFHSLLH 377
+D+ + + +D + ED+ L E VQ+G+ S Y GR +++ H ++H
Sbjct: 305 EDQQKLVEWYRDV--FRPEDLRLVESVQKGMRSRGYRGQGRIMVDRQRSGISEHGIVH 360
>gi|322372076|ref|ZP_08046618.1| Rieske 2Fe-2S family protein [Haladaptatus paucihalophilus DX253]
gi|320548498|gb|EFW90170.1| Rieske 2Fe-2S family protein [Haladaptatus paucihalophilus DX253]
Length = 379
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 167/364 (45%), Gaps = 39/364 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++T P +E +VF R W G+ + + + DFF+ +G+ + ++ RDD + A
Sbjct: 26 PAEYFTSPDVFEMEKEKVFSRYWVYAGHANSIPEVGDFFTRTVGDKQVIILRDDEDDVRA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL-------LKATRITGIKD 141
F+NVC H S + T G S CPYH WTY LDG L +A+ + D
Sbjct: 86 FYNVCAHRGSKMVDDTPMTDPGNMSRIQCPYHLWTYDLDGDLSTTPKSFEEASLNPDLDD 145
Query: 142 FNVKEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+V E GL+ + GP V +N + + E + E+L ++
Sbjct: 146 EDVSELDAETNGLMEVSTDRIGPLVFVNFDTDPIPLSEQAGK------MATELEVLPLDE 199
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ 256
+ + ++ +ECNWK F NY + H H+ G+QL+ + + +
Sbjct: 200 YEHAARFVSE----VECNWKTFGGNYSECD-HCQANHQDWIKGIQLNDSELEVNDYHWV- 253
Query: 257 RCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTRCKVVFD 312
E DD R+ +A + +++PNF +N YG T ++ P+ R +++ D
Sbjct: 254 -LHYTHEEDVDDDLRIHDEHEAKFYYMWPNFTVNMYGTADGYGTYIIDPIDEERFQLIAD 312
Query: 313 YFL-DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
YF D + D++ + ++ S Q+Q ED L E GL+S A + P+ E T++
Sbjct: 313 YFFRDAEMTDEEL---EFVRTSRQLQEEDFELVERQYEGLKSGALAQAQLGPN-EHTLHK 368
Query: 372 FHSL 375
FH L
Sbjct: 369 FHRL 372
>gi|354547736|emb|CCE44471.1| hypothetical protein CPAR2_402730 [Candida parapsilosis]
Length = 464
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 178/390 (45%), Gaps = 54/390 (13%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SW+ + + LE +F+ SW + + D++S ++ ++F + + +G +
Sbjct: 42 TLPASWWFNENIFNLEKRAIFHNSWLFCTHKSRFTKSGDYYSFQVAGIKFFIIKSRDGDL 101
Query: 92 HAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL- 149
+AFHNVCRH A ++ SG + C YHGW+Y +G L A + ++ F E L
Sbjct: 102 NAFHNVCRHRAFPVVQKQSGTSAVLTCKYHGWSYNSNGKLSNAPQFDNVEGFEKSENSLY 161
Query: 150 -VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRR 207
+P+ V G V +N ++AV ++W GG + + +N D Y
Sbjct: 162 AIPIHVTPQG-LVFVNFNQDAVK---------FDDWFGGLT--IELNEFDFDDYEYHMSY 209
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY------------STSLYEKVSI 255
E + NWK D Y + YH P AH GL S ++++Y +T + E+
Sbjct: 210 ELHGDFNWKTLMDGYQEC-YHCPVAHPGLNSAFKMETYKVVPKNRYCRHYATLIREEPKA 268
Query: 256 QRCES----------GSTEGTDDT--------HRLGSKA-----IYAFIYPNFMINRYGP 292
++ E G + +DT G+K ++ +++PN +N Y P
Sbjct: 269 EKKERVHEGSSWFGFGKKKSQEDTVTTAEPEKTTTGNKGGEFDGLWVYLFPNNGVNCYSP 328
Query: 293 WMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLE 352
+ V+PL+ T+ + +D + + D+A + + +QV++ED LC+ Q+ L
Sbjct: 329 AWYSIRVLPLSATKTTLQYDIYTKKGI--DEATKAEFVDFLQQVEIEDFNLCQLTQQNLN 386
Query: 353 SPAYCSGRYAPSVEQTMYHFHSLLHCNLTN 382
Y SG P E + ++ +L+ + N
Sbjct: 387 EGIYSSGYLHPQKENGVLYYQTLVRDAIKN 416
>gi|37523004|ref|NP_926381.1| hypothetical protein gll3435 [Gloeobacter violaceus PCC 7421]
gi|35214007|dbj|BAC91376.1| gll3435 [Gloeobacter violaceus PCC 7421]
Length = 372
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 162/366 (44%), Gaps = 33/366 (9%)
Query: 21 FNPQIPIEKAL------TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
P EKA T P +YTDP+ E +F R W +G +Q P ++F
Sbjct: 1 MTPMTTFEKARLQSSERTLPGRYYTDPAIFDQEQREIFARRWVCIGRAEQAHSPGEYFLT 60
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKK--SWFVCPYHGWTYGLDGTLLK 132
++ +V RD G + AFHN+CRH + L + + + + CPYH W+Y LDG+L
Sbjct: 61 QVAGESLIVIRDHRGVLGAFHNLCRHRGTRLCSETAGRFTALVRCPYHAWSYRLDGSLAA 120
Query: 133 ATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEIL 192
A + DF++ ++ L +A W FV LN+ + E V + ++ + G L
Sbjct: 121 APNMDQAPDFDLADYPLHRCRLAEWEGFVWLNLDPQPTPFESVFAPLIGR-FTGWRLPAL 179
Query: 193 SINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK 252
+ R Y + NWK+ +NY + H P H LA DS L E
Sbjct: 180 RLGA---------RVTYDLRANWKLVFENY-NECCHCPPIHPRLAQLSPSDSGRNDLMEG 229
Query: 253 ------VSIQRCESGSTEGTDDTHRLGS-------KAIYAFIYPNFMINRYGPWMDTNLV 299
+ I + + G+ LG+ +A Y ++PN + + + + + +
Sbjct: 230 PFLGGYMGIHPGMALTASGSRSRPPLGTVAGEDLQRAYYYTLFPNLLFSLHPDYAMVHFL 289
Query: 300 IPLAPTRCKVVFDYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCS 358
+PLAP ++V +++ D + F ++ +++ +D +CE Q+G S AY
Sbjct: 290 VPLAPDSTRIVCEWYFDPTQIIQPGFDPTDAVALWDEINRQDWQVCEWTQQGTASRAYTP 349
Query: 359 GRYAPS 364
G YA S
Sbjct: 350 GPYAHS 355
>gi|302887114|ref|XP_003042446.1| hypothetical protein NECHADRAFT_72708 [Nectria haematococca mpVI
77-13-4]
gi|256723356|gb|EEU36733.1| hypothetical protein NECHADRAFT_72708 [Nectria haematococca mpVI
77-13-4]
Length = 422
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 24/342 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W + + +L + D+ + EF++C+D +G I+A
Sbjct: 30 PASWYTSQEMYELEKRAIFSRKWLLTTHKARLPNNGDWLKYEVANFEFIICKDRDGNINA 89
Query: 94 FHNVCRHHA-SILATGSGKK---SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
FHN+CRH A +L G + S+F C YHGW+YGL+G L KA ++ F+ + GL
Sbjct: 90 FHNICRHRAFPVLPPEKGDQGNASFFACKYHGWSYGLNGKLAKAPGYQDLEGFDKSKNGL 149
Query: 150 VPLEV-ATWGPFVLLNM-GKEAVHQEEVD--SNVVANEWLGGSSEILSINGIDSSLSYLC 205
+P+ V F+ +NM GKE D N+ A+E N D + +
Sbjct: 150 LPIHVHVDVRGFIWINMDGKEKPEIAWSDDFDNIDAHERFS------FYNFEDYAFDHTW 203
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
E + NWK+ DNY + YH AH + S L+SY +K IQ S
Sbjct: 204 --EMEGDYNWKILADNY-NECYHCKVAHPDIPSIADLNSYYVET-KKAYIQHFGS----P 255
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF 325
T+D + G + + +PN N + +P +P++ + ++ F + + D+
Sbjct: 256 TEDQIKRGFRVAATYYFPNASTNVSPHFFMIQRFVPKSPSKSIMRYEVFRNKNSSDEDFT 315
Query: 326 IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ + +++ ED LC QR + + + +G P +EQ
Sbjct: 316 VISDM--YKRIMSEDKYLCANAQRNVNAGVFVNGEMHPEMEQ 355
>gi|429858813|gb|ELA33619.1| naphthalene -dioxygenase subunit alpha [Colletotrichum
gloeosporioides Nara gc5]
Length = 424
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 165/353 (46%), Gaps = 21/353 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W ++ + ++ P D+ + F+V +D GKI+A
Sbjct: 28 PASWYTSQEMYELERRAIFSRKWLLITHKARVPKPGDWIKYNVAGYSFIVVQDRKGKINA 87
Query: 94 FHNVCRHHASILATGSGKKSW-FVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN+CRH A + T G S+ F C YHGW+YGL G L KA + F+ + GL P+
Sbjct: 88 FHNICRHRAFPVVTEDGGNSFMFSCKYHGWSYGLSGNLAKAPGYQDLDGFDKSKNGLFPI 147
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG-GSSEILSINGIDSSLSYLCRREYT 210
V FV +N+ +A Q EV N +++ G E D Y+ ++
Sbjct: 148 HVHIDRNGFVWVNL--DANEQPEVAWN---DDFYGIDEQERFQHYNFD---DYIFDHQWE 199
Query: 211 IEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
+E NWK+ DNY + YH AH + S L+SY + + IQ + E +
Sbjct: 200 MEGDYNWKILADNY-NECYHCKVAHPDIPSIADLNSYYVNT-KDAYIQHFGQPTPEQIEK 257
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
R+ + + +PN +N + +P P + + ++ F + + D+ +
Sbjct: 258 GFRVAA----TYFWPNASMNVSPHFFFIQRFVPSGPGKSAMRYEVFRNKNSSDEDFTVIS 313
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
+ +++ ED LC+ Q+ + + + +G P++E+ F S + NLT
Sbjct: 314 DM--YKRIMSEDKYLCDNAQKNINAGVFVNGEMHPTMEKGPLFFQSKVRENLT 364
>gi|419762665|ref|ZP_14288911.1| rieske [2Fe-2S] domain protein [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397744160|gb|EJK91372.1| rieske [2Fe-2S] domain protein [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 374
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWIIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM EA E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPEA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYC-SGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S YC GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYCGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|302897110|ref|XP_003047434.1| hypothetical protein NECHADRAFT_54321 [Nectria haematococca mpVI
77-13-4]
gi|256728364|gb|EEU41721.1| hypothetical protein NECHADRAFT_54321 [Nectria haematococca mpVI
77-13-4]
Length = 414
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 160/365 (43%), Gaps = 28/365 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E P+SWYT LE +F + W + ++ +LK+P D+ + +F++ R
Sbjct: 21 PQESVRALPASWYTSRDMYELERRAIFSKRWLFITHSSRLKEPGDWLRYELAGFDFIITR 80
Query: 86 DDNGKIHAFHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
D IHAFHNVCRH A I GSG C YHGW+YGL+G L KA G+ F+
Sbjct: 81 DRKNNIHAFHNVCRHRAYPVIEKEGSGNAKILACRYHGWSYGLNGKLAKAPGYQGMAGFD 140
Query: 144 VKEFGLVPLEVAT-WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
++ GL + F+ +NM V +E + + + + N D L
Sbjct: 141 KEQNGLFRIHTKVDVNGFIWVNMDASEVPEEPWEGHFAD---VDKQERYKAYNFDDYDLD 197
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGS 262
+ E E NWK+ DN+ + YH P H + L L+S+ + + CES
Sbjct: 198 HTY--ELDGEYNWKILADNF-NECYHCPTTHADIPEFLNLESFDSDTKDGHIQHHCESTP 254
Query: 263 TE-----GTDDTHRLGSKAIYAFIYPNF-MINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
+ T T+ A+ + P+F MI ++ +P P K+ ++ + +
Sbjct: 255 EQIEKGLYTASTYYFPMSAM--VVSPHFIMIQKF---------LPSGPRSSKMAYEVYKN 303
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ D + + +V ED +LC Q+ L+ + +G+ P E+ F S +
Sbjct: 304 RNSSDTDFHLISDM--YARVMSEDKVLCNNAQKNLDRGVFVNGQLHPKYEKAPLFFQSTV 361
Query: 377 HCNLT 381
+T
Sbjct: 362 RNVIT 366
>gi|378726177|gb|EHY52636.1| hypothetical protein HMPREF1120_00845 [Exophiala dermatitidis
NIH/UT8656]
Length = 413
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 159/348 (45%), Gaps = 25/348 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W ++ + + ++ I EFV+CRD +IH
Sbjct: 29 PASWYTSEEMYQLERRAIFSRRWMLITHRSRFNQAGNYVKFEIAGYEFVLCRDRKDQIHG 88
Query: 94 FHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A + G G F C YHGW+YGLDG L KA + ++ F+ + GL P+
Sbjct: 89 FHNVCRHRAFPVVQGQQGTAKIFACKYHGWSYGLDGKLAKAPKYDELEGFDKSQNGLFPI 148
Query: 153 EVATWGP-FVLLNM-GKEA--VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
V F+ +N+ GKE V EE V + E + D Y+ E
Sbjct: 149 HVRIDASGFIWVNLDGKETPEVPWEEDFEGV-------DTQERYKVYNFD---DYVLDHE 198
Query: 209 YTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
Y ++ NWK+ DN+ + YH P AH + + ++++ S + + T
Sbjct: 199 YKLDGAYNWKILADNF-NECYHCPTAHPDIPTLADIETHDVS-----GVDGYIKHQSVPT 252
Query: 267 DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFI 326
++ RLG + +PN I+ ++ +P P + + F + + ++
Sbjct: 253 EEQKRLGMAIGSTYFFPNVSISVLPHFIMLQRFLPNGPKSSSMHYQIFRNKNSSEED--F 310
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ K +V ED +LCE Q+ L + + +G+ P +E+ +F
Sbjct: 311 QRIHKLYAKVVSEDKVLCELSQKNLNAGVFVNGQMHPRLEKGPLYFQQ 358
>gi|325093501|gb|EGC46811.1| Rieske domain-containing protein [Ajellomyces capsulatus H88]
Length = 407
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 158/350 (45%), Gaps = 19/350 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY E +F + W + + ++ DP DF + + F + +D +G++
Sbjct: 17 TLPASWYHSTQLYEAERRAIFSQKWLQITHANRFTDPGDFATYEMAGYPFFIIKDRSGEL 76
Query: 92 HAFHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AFHNVCRH A + K C YHGW+YGL+G L KA R + DFN + + L
Sbjct: 77 RAFHNVCRHRAFPVVKGKSGKGKKILSCGYHGWSYGLNGKLAKAPRFQNLPDFNAENYSL 136
Query: 150 VP--LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
P L + G FV +N+ + V D A + + E L + ++ SY
Sbjct: 137 FPIHLHIDRCG-FVWVNLDAQDVPSVSWDEQCGAVD----AQERLGVFEME-KYSYHHSW 190
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
E+ E NWK DNY + YH P AH G+A+ L++YS + + D
Sbjct: 191 EFEAEYNWKTMVDNY-NECYHCPVAHPGIAATTDLENYSVATEQGFIAHFARPKPEYAAD 249
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK-AFI 326
+ S +++P+ I ++ +PL T ++ ++ + D++ A +
Sbjct: 250 NN----SNVAPTYVFPSSAITINSVYLYLTRCVPLGATSVRMEYEVYRHAGCADEEFAAM 305
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ +K Q++ ED +LC VQ L Y SG P E + + L+
Sbjct: 306 DTFMK---QIEEEDRVLCSLVQANLNVGVYRSGPLHPREEMGVAYVKGLV 352
>gi|290955267|ref|YP_003486449.1| ring hydroxylating dioxygenase subunit [Streptomyces scabiei 87.22]
gi|260644793|emb|CBG67878.1| putative ring hydroxylating dioxygenase subunit [Streptomyces
scabiei 87.22]
Length = 377
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 166/372 (44%), Gaps = 22/372 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P +YTDP A E RVF W V +L P F + ++G +V
Sbjct: 6 LPPSLIPTLPGEYYTDPGVFAQEQERVFEAMWFCVARASELAKPGAFRTYQVGRESVLVS 65
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R +G + AF N+CRH + L T SG+ K F CPYH WTYGLDG L+ A +T + D
Sbjct: 66 RARDGSVKAFLNICRHRGAKLCTEESGEVKRAFQCPYHAWTYGLDGKLVAAPNLTSMPDI 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQE-EVDSNVVANEWLGGSSEILSINGID-SS 200
+ E+GL+ + V W +V + + EA E EV VV E LG ++ SI D
Sbjct: 126 DRTEYGLINVHVREWLGYVWVCLADEAPSFEAEVLGAVV--ERLG---DVESIERYDIDG 180
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYE------K 252
LS R Y ++ NWK+ +N+++ YH H L L D Y+ Y
Sbjct: 181 LSVGRRITYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFG 239
Query: 253 VSIQRCESGSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+Q +EG D + + YA + P IN + + + P+A R
Sbjct: 240 EDVQGFTVDGSEGLDRIPGVAEDQDRRYYAITVRPQVFINLVPDHVIFHRMYPMAADRTI 299
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
V D+ + + +E+S++ +V +D CE Q + S AY G E
Sbjct: 300 VECDWLYLPHVVESGKDVERSVELFHRVNQQDFDACERTQPAMSSKAYAKGGVLVPSEHH 359
Query: 369 MYHFHSLLHCNL 380
+ FH+ L L
Sbjct: 360 IGEFHTWLQNKL 371
>gi|357974286|ref|ZP_09138257.1| Rieske (2Fe-2S) protein [Sphingomonas sp. KC8]
Length = 395
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 159/352 (45%), Gaps = 38/352 (10%)
Query: 31 LTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS-GRIGEVEFVVCRDDNG 89
L+ P+ Y+DP + A+E+ RV SWQVV + + DP D+ IGE +V R D+G
Sbjct: 20 LSLPAWLYSDPEYFAVEMDRVLRPSWQVVCHVSDVPDPGDYHVLDFIGE-SVIVIRGDDG 78
Query: 90 KIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
+ AF NVCRH AS L G SG VCPYH WTYG DG L + ++ G
Sbjct: 79 AVRAFANVCRHRASRLVDGPSGCAKKLVCPYHAWTYGNDGQLTGVPMKSDYPGLDLTTHG 138
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRR 207
L P+++ W F+ + + D VA +E+ D ++ + R
Sbjct: 139 LAPIDIDIWRGFIFIRLTG--------DGPRVAERMGCYDAEVAPYRFEDMRAIGRVTLR 190
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY---STSLYEKV---SIQRCESG 261
+ NWK DNY D G H+P AH GL D Y + S +K+ + R S
Sbjct: 191 PRPV--NWKNIADNYSD-GLHIPVAHPGLTRLFGRDGYFIEAASYVDKMWGNVVDRPSSN 247
Query: 262 STEGT------------DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+E D +L +Y ++PNF Y +D +PL PT +
Sbjct: 248 ISERAYQAFLPHMPHLPADRQKLW---LYYKLWPNFAFEIYPDQIDFMQFLPLTPTTTLI 304
Query: 310 V-FDYFL-DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
Y L D ++ +A + + + QV ED + E VQ+G+ SP+Y G
Sbjct: 305 REISYRLPDDDRRETRAAQYLNWRINRQVNREDTQIIERVQQGMASPSYTVG 356
>gi|262043626|ref|ZP_06016735.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038964|gb|EEW40126.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 374
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L TG GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLTGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM EA E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPEA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|336249657|ref|YP_004593367.1| Rieske (2Fe-2S) domain-containing protein [Enterobacter aerogenes
KCTC 2190]
gi|334735713|gb|AEG98088.1| Rieske 2Fe-2S domain protein [Enterobacter aerogenes KCTC 2190]
Length = 374
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A ++
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVE 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM +A E V++ + G ++L +
Sbjct: 133 NFDSDKATLVPVRLEEYAGFVFINMNPQA---ESVETQLP-----GLQDKVLEVCPDVHE 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|408393826|gb|EKJ73084.1| hypothetical protein FPSE_06697 [Fusarium pseudograminearum CS3096]
Length = 412
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 156/343 (45%), Gaps = 29/343 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PS+WYT P LE +F + W +V + ++L + D+ EFVV RD G ++
Sbjct: 26 PSTWYTSPEMFELERRAIFSKKWLLVSHQNRLPNAGDWLKFNTTGYEFVVARDRKGNLNG 85
Query: 94 FHNVCRHHASILATG--SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL-- 149
FHNVCRH A + G SG S F C YHGW+YGL G L KA + F+ + GL
Sbjct: 86 FHNVCRHRAFPVVQGGTSGNSSIFACKYHGWSYGLSGNLAKAPNYDVLDGFDKSQNGLFK 145
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW---LGGSSEILSINGIDSSLSYLCR 206
+ L++ +G F+ +N+ DS+ W G + +N + Y+
Sbjct: 146 IHLKIDAYG-FIWVNL----------DSSDNPEPWEKHFDGIDQQERLNKVKFE-DYVLD 193
Query: 207 REYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTE 264
EY++E NWK+ DN+ + YH P H L + L +K I+ S+
Sbjct: 194 YEYSMEGNYNWKILADNF-NECYHCPTTHPDLPTLADLGKMKCDA-DKEWIKH----SSV 247
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA 324
T++ + G + ++YPN + +M +P + T + + F + D+
Sbjct: 248 QTEEQKKAGLQLASTYLYPNASVVVLPHFMMIQRFVPTSATHSSMHYQVFRNSKSSDEDF 307
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ + +V ED LC G QR LE+ + SG P +E
Sbjct: 308 HLIADM--YRRVVSEDKELCIGAQRNLEAGVFISGELHPRLEH 348
>gi|427419675|ref|ZP_18909858.1| deoxyhypusine synthase [Leptolyngbya sp. PCC 7375]
gi|425762388|gb|EKV03241.1| deoxyhypusine synthase [Leptolyngbya sp. PCC 7375]
Length = 731
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 150/346 (43%), Gaps = 17/346 (4%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP F A EL V++ SWQ V + + +P D+ + +G+ +V R +G + A HN+
Sbjct: 392 YIDPEFFARELRHVWHHSWQCVARDEDIPEPGDYVTCTLGQEPIIVLRASDGSLKAMHNI 451
Query: 98 CRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
CRH S L G G ++ VCPYH WTYGL+G LL T+ + + L+P +V +
Sbjct: 452 CRHRGSTLLEGQGNCQNKIVCPYHAWTYGLNGQLLGITKPQLFQGLDTLNIQLIPAQVDS 511
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYTIECNW 215
W F+ +N E ++L L D SSL + R Y NW
Sbjct: 512 WNGFIFVNPDAEGES---------LADYLAEMPCFLEQYSQDWSSLREIDRWFYDEPVNW 562
Query: 216 KVFCDNYLDGGYHVPYAH----KGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
K+ +NY++ YH H K L + + T + ++ +
Sbjct: 563 KLIVENYVE-DYHFDVVHDRSFKSLYDLDNIKTLPTGRHIRILVPYNRQPPDGFYQKIWE 621
Query: 272 LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSL- 330
G + +I+PN M+N + L+ PL +V + S + + L
Sbjct: 622 AGQVSCQGYIFPNMMVNTEKEHVSVFLLTPLDAGHTRVEVIIYQSPSQCASLLYQREELR 681
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
K+ ++ ED +C +Q + S AY A E + HFHS+L
Sbjct: 682 KEFDEFMEEDFRVCRQIQANISSQAYQVTALANMHESGIIHFHSVL 727
>gi|429213492|ref|ZP_19204657.1| dioxygenase subunit alpha [Pseudomonas sp. M1]
gi|428157974|gb|EKX04522.1| dioxygenase subunit alpha [Pseudomonas sp. M1]
Length = 373
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 164/363 (45%), Gaps = 26/363 (7%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+A T P+ +YT + E +F RSW V + ++ + + + + +V R
Sbjct: 16 EEAFTIPAHFYTSKAVYEHEKEAIFARSWICVAHRSEVAENNAYITREVIGESIIVVRGR 75
Query: 88 NGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G + AF+NVC H L GSGK K+ CPYH WT+ LDG L ++ F+ +
Sbjct: 76 DGVLRAFYNVCPHRGHQLLEGSGKAKNVIACPYHAWTFKLDGELTHVRNCDAVQGFDKGD 135
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
+GLVPL V + F+ +NM D+ V ++ G + + + L R
Sbjct: 136 YGLVPLRVEEYAGFIFINMDN--------DAGSVEDQLPGLQARMRQACAVIDDLQLAAR 187
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
+ NWK DNYL+ YH AH A + + Y +L+ S+Q + S+E +
Sbjct: 188 FVTSTPANWKSIVDNYLE-CYHCGPAHPSFADSVDVGQYGHTLHGNWSLQYGIAKSSEQS 246
Query: 267 DDTHRLGSKAIYA--FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLK 320
S +A + +P M N P + VI P + YFLD L
Sbjct: 247 FKVDESVSDPSFAGFWAWPCTMFN-VPPGANFMTVIYEFPVDAETTLQHYDIYFLDKELT 305
Query: 321 DDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQT------MYHFH 373
+++ + + +D + ED+ L E VQ+GL+S Y GR +++ + HFH
Sbjct: 306 EEQKVLVEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMVDKQRSGISEHGIAHFH 363
Query: 374 SLL 376
+L+
Sbjct: 364 NLI 366
>gi|425077343|ref|ZP_18480446.1| hypothetical protein HMPREF1305_03258 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425087976|ref|ZP_18491069.1| hypothetical protein HMPREF1307_03427 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405593052|gb|EKB66504.1| hypothetical protein HMPREF1305_03258 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405602108|gb|EKB75250.1| hypothetical protein HMPREF1307_03427 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 374
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNEITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM EA E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPEA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|425090899|ref|ZP_18493984.1| hypothetical protein HMPREF1308_01157 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405613056|gb|EKB85804.1| hypothetical protein HMPREF1308_01157 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 374
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM EA E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPEA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|152969569|ref|YP_001334678.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238894049|ref|YP_002918783.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|330010191|ref|ZP_08306706.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|365139552|ref|ZP_09345899.1| hypothetical protein HMPREF1024_01930 [Klebsiella sp. 4_1_44FAA]
gi|378978045|ref|YP_005226186.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|402781467|ref|YP_006637013.1| benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419971848|ref|ZP_14487278.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419978654|ref|ZP_14493949.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419987137|ref|ZP_14502261.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419989621|ref|ZP_14504596.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419994959|ref|ZP_14509767.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420004838|ref|ZP_14519470.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420010437|ref|ZP_14524910.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420014756|ref|ZP_14529061.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420019012|ref|ZP_14533207.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420025053|ref|ZP_14539063.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420031415|ref|ZP_14545236.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420039175|ref|ZP_14552813.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420045056|ref|ZP_14558529.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420050916|ref|ZP_14564210.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420056476|ref|ZP_14569632.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420061537|ref|ZP_14574524.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420066194|ref|ZP_14578996.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420070708|ref|ZP_14583358.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420079588|ref|ZP_14592031.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420082594|ref|ZP_14594889.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421909132|ref|ZP_16338954.1| Benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421916484|ref|ZP_16346060.1| Benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424934114|ref|ZP_18352486.1| Putative di(Mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|425080840|ref|ZP_18483937.1| hypothetical protein HMPREF1306_01586 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428153050|ref|ZP_19000691.1| Benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428933792|ref|ZP_19007335.1| benzoate 1,2-dioxygenase [Klebsiella pneumoniae JHCK1]
gi|428940829|ref|ZP_19013898.1| benzoate 1,2-dioxygenase [Klebsiella pneumoniae VA360]
gi|449048563|ref|ZP_21731235.1| benzoate 1,2-dioxygenase [Klebsiella pneumoniae hvKP1]
gi|150954418|gb|ABR76448.1| putative di(mono)oxygenase, alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238546365|dbj|BAH62716.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|328534607|gb|EGF61184.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|363654165|gb|EHL93080.1| hypothetical protein HMPREF1024_01930 [Klebsiella sp. 4_1_44FAA]
gi|364517456|gb|AEW60584.1| putative di(mono)oxygenase, alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397345611|gb|EJJ38733.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397351097|gb|EJJ44182.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397352786|gb|EJJ45864.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397364361|gb|EJJ56993.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397368732|gb|EJJ61337.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397369120|gb|EJJ61722.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397377772|gb|EJJ69998.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397378647|gb|EJJ70854.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397389673|gb|EJJ81606.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397397610|gb|EJJ89282.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397400284|gb|EJJ91929.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397403441|gb|EJJ95008.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397410285|gb|EJK01571.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397410512|gb|EJK01790.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397420575|gb|EJK11640.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397430464|gb|EJK21159.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397430541|gb|EJK21233.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397441212|gb|EJK31592.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397443543|gb|EJK33857.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397452051|gb|EJK42126.1| putative di(mono)oxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|402542349|gb|AFQ66498.1| Benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|405604946|gb|EKB78035.1| hypothetical protein HMPREF1306_01586 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|407808301|gb|EKF79552.1| Putative di(Mono)oxygenase alpha subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|410116976|emb|CCM81579.1| Benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121277|emb|CCM88685.1| Benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426301510|gb|EKV63747.1| benzoate 1,2-dioxygenase [Klebsiella pneumoniae VA360]
gi|426304459|gb|EKV66603.1| benzoate 1,2-dioxygenase [Klebsiella pneumoniae JHCK1]
gi|427536978|emb|CCM96829.1| Benzoate 1,2-dioxygenase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448877007|gb|EMB11980.1| benzoate 1,2-dioxygenase [Klebsiella pneumoniae hvKP1]
Length = 374
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM EA E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPEA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|255939151|ref|XP_002560345.1| Pc15g01200 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584967|emb|CAP83006.1| Pc15g01200 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 413
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 164/361 (45%), Gaps = 36/361 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT P LE +F + W + ++ +LK+ D+ + +F++ RD G I+A
Sbjct: 28 PASWYTSPEMYELERRAIFSKRWLFITHSMRLKNTGDWLRYELAGFDFIITRDRQGDINA 87
Query: 94 FHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL-- 149
FHNVCRH A + GSG C YHGW+YGL+G L KAT + DF+ ++ GL
Sbjct: 88 FHNVCRHRAYPVVEKEGSGNSKILACRYHGWSYGLNGKLAKATNYQELSDFDKEQNGLFR 147
Query: 150 VPLEVATWGPFVLLNMGKEAVHQ---EEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
+ L+V G F+ +NM V + EE +V E + + + D Y
Sbjct: 148 IHLKVDVNG-FIWVNMDANEVPEVSWEEHFRDVDKQE----RYKAYNFDNYDFDHDYALE 202
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTE-- 264
+Y NWK+ DN+ + YH P H + + L ++S+ + L + CES +
Sbjct: 203 GDY----NWKILADNF-NECYHCPTTHADIPAFLNMESFDSDLKDGHIQHHCESTPEQIE 257
Query: 265 ---GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
T T+ A+ + P+F++ +P + K+ ++ + + + D
Sbjct: 258 KGLYTASTYYFPMSAM--VVSPHFIM--------VQKFLPSSAKSSKMAYEIYRNRNSSD 307
Query: 322 -DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
D I +V ED +LC Q+ L+ + SG P E+ F S + +
Sbjct: 308 ADFKLISDMYA---RVMGEDKVLCNNAQKNLDRNVFTSGELHPKYEKAPLFFQSTVRDVI 364
Query: 381 T 381
T
Sbjct: 365 T 365
>gi|302527123|ref|ZP_07279465.1| dioxygenase [Streptomyces sp. AA4]
gi|302436018|gb|EFL07834.1| dioxygenase [Streptomyces sp. AA4]
Length = 381
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 172/368 (46%), Gaps = 24/368 (6%)
Query: 25 IPIEKALTP--PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFV 82
+ + ++L P P YTDP+ A E R+F W + L P F + +IG +
Sbjct: 12 VDLPQSLLPTLPGPHYTDPAIFAREQERIFEAGWFCAVRSADLPSPGSFETVQIGRESVL 71
Query: 83 VCRDDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGI 139
+ R +G + AF NVCRH + L T G+ K++ F C YH WTYGLDG L+ A +TG+
Sbjct: 72 IARGRDGALRAFLNVCRHRGARLCTDEKGTVKRA-FQCMYHAWTYGLDGKLVAAPNLTGM 130
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGID 198
D + E+GL + + W + + + +EA + V ++V +E LGG EI + GI+
Sbjct: 131 PDVDRVEYGLTGVHLREWLGYAWVCLAEEAPSFADTVMADV--SERLGGPGEIEAY-GIE 187
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ 256
+L+ R EY + NWK +N+++ YH H L L D Y+ + +
Sbjct: 188 -NLALGRRIEYDVRANWKQIIENFME-CYHCATIHPELTEVLPEFADGYAAQYFVGHGAE 245
Query: 257 ---RCESGSTEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTR 306
+ +G D RL + YA I P +N + + + PLAP R
Sbjct: 246 FGADVTGFTVDGGDGLQRLPGVGEHQDRRYYAITIRPQVFVNLVPDHVIVHRMFPLAPDR 305
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
V D+ + + A +++S++ +V +D CE Q+ + S AY G E
Sbjct: 306 TLVRCDWLYLPEVVESGADLDRSVELFHRVNQQDFEACERCQQAMGSRAYARGGVLVPSE 365
Query: 367 QTMYHFHS 374
+ FH+
Sbjct: 366 HHIGEFHA 373
>gi|108804397|ref|YP_644334.1| Rieske (2Fe-2S) domain-containing protein [Rubrobacter xylanophilus
DSM 9941]
gi|108765640|gb|ABG04522.1| Rieske (2Fe-2S) region [Rubrobacter xylanophilus DSM 9941]
Length = 434
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 181/388 (46%), Gaps = 48/388 (12%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P+E A T YT P F +E RVF +SW VG+ Q+++P + ++
Sbjct: 32 RLPVELASTLLPEAYTSPEFFDIEKERVFAKSWIPVGFVSQVREPGRTIVAEVAGRSIII 91
Query: 84 CRDDNGKIHAFHNVCRHHAS-ILATGSG--KKSWFVCPYHGWTYGLDGTLL--------- 131
RD +GK+ AFHNVCRH A+ +L G + + CPYH WTY L+G L
Sbjct: 92 ARDKSGKLRAFHNVCRHRAARLLDEGCHVVRNNRIRCPYHSWTYDLEGKCLGTPLFEGSD 151
Query: 132 ------KATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWL 185
A ++G+K F+ ++GL+P+ V +WG V +N+ E + ++L
Sbjct: 152 IPEEGRTAFDMSGVKGFDKADYGLLPVRVDSWGFLVFVNLDPETIP---------LKKYL 202
Query: 186 GGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY 245
G E S ++ + ++ Y I N+K+ +N+++ YH+P+ H L +++ +
Sbjct: 203 GDLPERFSSYQLE-EWRVVRQKTYDIAANYKLIGENFME-YYHLPWVHPELVKVSRMEDH 260
Query: 246 ----STSLYEKVSI----QRCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGPW 293
+Y Q E+G +G L + A + +++PN +N
Sbjct: 261 YRWQGPGMYMGFCTTPISQNTEAGGWQGLPPISSLSKEEAVSARFIWLFPNTAVNILPNH 320
Query: 294 MDTNLVIPLAPTRCKVVFDYFL---DGSLKDDKA--FIEQSLKDSEQVQMEDIILCEGVQ 348
+ P P V D F+ SL + +A ++Q + + V ++DI + E VQ
Sbjct: 321 SFVMITRPDGPGHT--VEDTFILSHPESLANPEAEEKLDQLARFWDLVNVQDIEIVERVQ 378
Query: 349 RGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+G+ +P Y GR E+ ++ + +++
Sbjct: 379 QGISNPEYRGGRMCYRFEEPLHRYQNMV 406
>gi|396476526|ref|XP_003840048.1| similar to Rieske (2Fe-2S) domain-containing protein [Leptosphaeria
maculans JN3]
gi|312216619|emb|CBX96569.1| similar to Rieske (2Fe-2S) domain-containing protein [Leptosphaeria
maculans JN3]
Length = 414
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 163/358 (45%), Gaps = 38/358 (10%)
Query: 23 PQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFV 82
PQ +AL P++WYT LE +F R W ++ + +L +P D+ + + V
Sbjct: 20 PQKEAVRAL--PANWYTSEEMYQLERRAIFSRRWLILTHKSRLANPGDYLRYNVANYDVV 77
Query: 83 VCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
V +D +G+IHAFHNVCRH A ++ + G F C YHGW+YGL+G L KA +
Sbjct: 78 VSKDRSGEIHAFHNVCRHRAYPVVESDKGNAKIFSCKYHGWSYGLNGKLAKAPGYQDLPT 137
Query: 142 FNVKEFGLVPLEVA-TWGPFVLLNMGKEAVHQ-------EEVDSNVVANEWLGGSSEILS 193
F+ GL+P+ F+ +NM + + VD N++ E
Sbjct: 138 FDKTSNGLLPIHTRLDRNGFIYINMDSKKEPDVSWESQFDHVDEQTRFNQFNFDDYEFDH 197
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL-QLDSYSTSLYEK 252
+D NWK+ DN+ + YH H L +GL LDSY +
Sbjct: 198 TWNLDGPF------------NWKILADNF-NECYHCKTTHPDLTTGLVNLDSYDVHC-DA 243
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVV 310
IQ + +D LG + + +PN F + ++ +M +P +PT +
Sbjct: 244 DHIQH----DPQTPEDRKALGQEICSTYCFPNASFTVTQHFLFMQK--FMPKSPTESVMY 297
Query: 311 FDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
++ + + D+ + + D+ ++V ED ILCE Q+ +E+ + +G P +E+
Sbjct: 298 YEVWRNKHSSDEDFLL---ISDTYKRVMGEDKILCERAQKNIETGVFVNGELHPHMEK 352
>gi|206577758|ref|YP_002239368.1| Rieske 2Fe-2S domain-containing protein [Klebsiella pneumoniae 342]
gi|290510726|ref|ZP_06550096.1| dioxygenase subunit alpha yeaW [Klebsiella sp. 1_1_55]
gi|206566816|gb|ACI08592.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae 342]
gi|289777442|gb|EFD85440.1| dioxygenase subunit alpha yeaW [Klebsiella sp. 1_1_55]
Length = 374
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM +A E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPQA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|398789183|ref|ZP_10551132.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces auratus
AGR0001]
gi|396991631|gb|EJJ02767.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces auratus
AGR0001]
Length = 383
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 155/351 (44%), Gaps = 37/351 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ +YTDP+ +A E +F RSWQ+V + L P + + + E +V R +G +
Sbjct: 20 PARYYTDPTLVAAETRHIFARSWQLVCHESDLPGPGARLAATVADREVLVVRTADGALAG 79
Query: 94 FHNVCRHHASILATG---SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
NVCRH + L + SGK CPYHGWTY LDG L+ A I + GL
Sbjct: 80 HLNVCRHRGTRLVSAPEPSGKA--IRCPYHGWTYKLDGRLVGAPEARQIPCLDKPALGLF 137
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
P+ V ++ FV N+ +AV + + + A ++++ + S + L E
Sbjct: 138 PVRVESFLGFVFANLDPDAVPLAQQCAQLAAAVGHYAGADLVPVG--RSRIHDLAGAEVQ 195
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY-----------STSLYEKVSIQRCE 259
+ NWKV DNYL+ GYH+P AH GL L Y ++ L +K S R E
Sbjct: 196 -QANWKVTVDNYLE-GYHIPVAHPGLMRLLDYRRYTCETAEAYALFTSPLRDKPSSNRVE 253
Query: 260 ----------SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
G TE R YA IYPN +I+ Y + +P A R V
Sbjct: 254 RIYQRLASPMPGLTEADRRVWR------YAVIYPNTLIDFYPDHVLAWTALPTAVDRVAV 307
Query: 310 VFDYFL-DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
++ G+ + ++ ED+ L VQ+GL +P + G
Sbjct: 308 PGAFYTRRGAGARTRLARRLNIHLGRLTNDEDVALVAQVQKGLGTPGFEPG 358
>gi|260941902|ref|XP_002615117.1| hypothetical protein CLUG_05132 [Clavispora lusitaniae ATCC 42720]
gi|238851540|gb|EEQ41004.1| hypothetical protein CLUG_05132 [Clavispora lusitaniae ATCC 42720]
Length = 447
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 166/376 (44%), Gaps = 41/376 (10%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SW+T LE +F +SW + +T + K P D+FS I + F + + G+I
Sbjct: 27 TLPASWWTSEKVFELEKRAIFNKSWMLCSHTCRFKKPGDYFSFTIVGINFFIIMNKQGEI 86
Query: 92 HAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
+AFHNVCRH A ++ G C YHGW+Y DG L KA ++ F E L
Sbjct: 87 NAFHNVCRHRAYPVVRKDKGSSVVIGCKYHGWSYNTDGALTKAPHFDQVEGFKKDENSLF 146
Query: 151 PLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
P+ T + +N + + V ++W G + + S Y E
Sbjct: 147 PIHTHVTNQGLIFVNFCNDP------EQLVPFDDWFVGLEKEMEEFDF-SDYEYHFSYEL 199
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTS------------LYEKVSIQR 257
+ NWK D Y + YH P AH GL S ++++Y + E+V+I+
Sbjct: 200 DGQFNWKTLMDGYQEC-YHCPTAHPGLNSAFKMETYKVVPKGKYCRHYAEIVKEEVAIED 258
Query: 258 CESGSTEGT---------------DDTHRLGSK--AIYAFIYPNFMINRYGPWMDTNLVI 300
+ + E + + G + ++ +++P+ +N Y P V+
Sbjct: 259 NDKDADEESSWFGFGKKKAPEKPVEKKKNPGGEFNGLWVYLFPSNGVNCYSPAWYFIRVL 318
Query: 301 PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
P+ PTR + +D + L + A ++ + + V++ED LC+ Q+ L Y SG
Sbjct: 319 PITPTRTILQYDIYTKKGLPE--AEKKEFVDFLQLVELEDFNLCQLTQKNLNQGIYGSGF 376
Query: 361 YAPSVEQTMYHFHSLL 376
P+ E+ + H+ L+
Sbjct: 377 LHPTKERGVLHYQGLV 392
>gi|225556884|gb|EEH05171.1| Rieske domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 487
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 156/350 (44%), Gaps = 19/350 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY E +F + W + + ++ DP DF S + F + + +G++
Sbjct: 17 TLPASWYHSTQLYEAERRAIFSQKWLQITHANRFTDPGDFASYEMAGYPFFIIKGRSGEL 76
Query: 92 HAFHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AFHNVCRH A + K C YHGW+YGL+G L KA R + DFN + + L
Sbjct: 77 RAFHNVCRHRAFPVVKGKSGKGKKILSCGYHGWSYGLNGKLAKAPRFQNLPDFNAENYSL 136
Query: 150 VP--LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
P L + G FV +N+ + V D A + + E L + ++ SY
Sbjct: 137 FPIHLHIDRCG-FVWVNLDAQDVPSVSWDEQCGAVD----AQERLGVFEME-KYSYHHSW 190
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
E+ E NWK DNY + YH P AH G+A+ L +YS + + D
Sbjct: 191 EFEAEYNWKTMVDNY-NECYHCPVAHPGIAATTDLKNYSVATEQGFIAHFARPKPEYAAD 249
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK-AFI 326
+ S +++P+ I ++ +PL T ++ ++ + D++ A +
Sbjct: 250 NN----SNVAPTYVFPSSAITINSVYLYLTRCVPLGATSVRMEYEIYRHAGCADEEFAAM 305
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ +K Q++ ED +LC VQ L Y SG P E + + L+
Sbjct: 306 DAFMK---QIEEEDRVLCSLVQANLNVGVYRSGPLHPREEMGVAYVKGLV 352
>gi|288936219|ref|YP_003440278.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Klebsiella
variicola At-22]
gi|288890928|gb|ADC59246.1| Rieske (2Fe-2S) iron-sulphur domain protein [Klebsiella variicola
At-22]
Length = 374
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM +A E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPQA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTEAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|425781068|gb|EKV19050.1| Naphthalene 1,2-dioxygenase subunit alpha [Penicillium digitatum
PHI26]
Length = 413
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 38/362 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT P LE +F + W + ++ +LK D+ + +F++ RD GKI+A
Sbjct: 28 PASWYTSPEMYELERRAIFSKRWLFITHSMRLKKTGDWLRYELAGFDFIITRDREGKINA 87
Query: 94 FHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL-- 149
FHNVCRH A + GSG C YHGW+YGL+G L KA + + +F+ ++ GL
Sbjct: 88 FHNVCRHRAYPVVEKEGSGNSQILACRYHGWSYGLNGKLAKAAKYQELSNFDKEQNGLYK 147
Query: 150 VPLEVATWGPFVLLNMGKEAVHQ---EEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
+ L+V G F+ +NM V + EE +V E + + D +Y +
Sbjct: 148 IHLKVDVNG-FIWINMDANEVPEVSWEEHFRDVDKQE----RYKAYNFEDYDLDHTYALQ 202
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTE-- 264
+Y NWK+ DN+ + YH P H + L L+S+ + L + CES +
Sbjct: 203 GDY----NWKILADNF-NECYHCPTTHADIPEFLNLESFDSDLKDGHIQHHCESTPEQIQ 257
Query: 265 ---GTDDTHRLGSKAIYAFIYPNF-MINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLK 320
T T+ A+ + P+F MI ++ +P + ++ ++ + + +
Sbjct: 258 KGLYTASTYYFPMSAM--VVSPHFIMIQKF---------LPSSAKSSQMAYEVYRNRNSS 306
Query: 321 D-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCN 379
D D I + +V ED ILC Q+ L+ + SG P E+ F S +
Sbjct: 307 DADFKLISEMYA---RVMGEDKILCNNAQKNLDRNVFTSGELHPRWEKAPLFFQSTVRDV 363
Query: 380 LT 381
+T
Sbjct: 364 IT 365
>gi|386034193|ref|YP_005954106.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
KCTC 2242]
gi|424829989|ref|ZP_18254717.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339761321|gb|AEJ97541.1| putative di(mono)oxygenase alpha subunit [Klebsiella pneumoniae
KCTC 2242]
gi|414707414|emb|CCN29118.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 374
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YT+ E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTNSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM EA E V++ + G ++L
Sbjct: 133 NFDSEKATLVPVRLEEYAGFVFINMNPEA---ESVETQLP-----GLQDKVLEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMFN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L DD+ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDDQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|46112848|ref|XP_383084.1| hypothetical protein FG02908.1 [Gibberella zeae PH-1]
Length = 412
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 29/343 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PS+WYT P LE +F + W +V + ++L D+ EFVV RD G ++
Sbjct: 26 PSTWYTSPEMFELERRAIFSKKWLLVSHQNRLPKAGDWLKFNTTGYEFVVARDRKGNLNG 85
Query: 94 FHNVCRHHASILATG--SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL-- 149
FHNVCRH A + G SG S F C YHGW+YGL G L KA + F+ + GL
Sbjct: 86 FHNVCRHRAFPVVQGGTSGNSSIFACKYHGWSYGLSGNLAKAPNYDVLDGFDKSQNGLFK 145
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW---LGGSSEILSINGIDSSLSYLCR 206
+ L++ +G F+ +N+ DS+ W G + +N + Y+
Sbjct: 146 IHLKIDAYG-FIWVNL----------DSSDNPEPWEKHFDGIDQQERLNKVKFE-DYVLD 193
Query: 207 REYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTE 264
EY++E NWK+ DN+ + YH P H L + L +K I+ S+
Sbjct: 194 NEYSMEGNYNWKILADNF-NECYHCPTTHPDLPTLADLGKMKCDT-DKEWIKH----SSV 247
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA 324
T++ + G + + YPN + +M +P + T + + F + +K
Sbjct: 248 QTEEQKKAGLQLASTYFYPNASVVVLPHFMMIQRFVPTSATHSSMHYQIFRN--IKSSSE 305
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ +V ED LC G QR LE+ + SG P +E
Sbjct: 306 DFHLAADMYRRVVAEDKDLCIGAQRNLEAGVFISGELHPRLEH 348
>gi|311280112|ref|YP_003942343.1| Rieske (2Fe-2S) domain-containing protein [Enterobacter cloacae
SCF1]
gi|308749307|gb|ADO49059.1| Rieske (2Fe-2S) iron-sulfur domain protein [Enterobacter cloacae
SCF1]
Length = 374
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 162/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTDP E VF +SW V + +L P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDPQVFEHEKDAVFAKSWICVAHGSELAKPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L TG G K+ CPYH W + LDG+L A ++
Sbjct: 73 VIVRGRDNVLRAFYNVCPHRGHQLLTGEGSAKNVITCPYHAWAFKLDGSLAHARNCENVE 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + L PL + + FV +NM A EE + G +++L
Sbjct: 133 NFDKDKANLTPLRLEEYAGFVFINMDPHAGSVEE--------QLPGLEAKLLEARPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNY++ YH AH G A +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFITRTPANWKNIVDNYME-CYHCGPAHPGFADSVQVDRYWHTMHGKWTLQFGYA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + + + F ++P M N P VI P + YF
Sbjct: 244 KPSEQSFKFEDGEESSFHGFWMWPCTMFN-VTPLKGMMTVIYEFPVDAETTLQHYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L +D+ + + ++ + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTEDQKSLIEWYRNV--FRPEDLNLVESVQKGLKSRGYRGQGRIMADKSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|403674802|ref|ZP_10937027.1| Dioxygenase alpha subunit [Acinetobacter sp. NCTC 10304]
Length = 371
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A + V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENATY--------VEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDGSLK---DDKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQLYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|451851811|gb|EMD65109.1| hypothetical protein COCSADRAFT_88221 [Cochliobolus sativus ND90Pr]
Length = 448
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 162/339 (47%), Gaps = 20/339 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WYT LE +F R W ++ + +L +P DF I + VV +D +G+I+A
Sbjct: 59 PANWYTSEEMYQLERRAIFTRRWLILTHKSRLANPGDFLRYNIANYDVVVSKDRSGEINA 118
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ G F C YHGW+YGL+G L KA +++F+ + GL P+
Sbjct: 119 FHNVCRHRAYPVVEKDGGNAKIFSCKYHGWSYGLNGNLAKAPGYQELQNFDKAKNGLFPI 178
Query: 153 EVAT-WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
FV +NM + V + +S + + + N D + E
Sbjct: 179 HTRIDRNGFVWINMDSKKVPEVSWESQF---DHVDEQTRFDQFNFDDYEFDHTWNLEGPF 235
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
NWK+ DN+ + YH H L +GL +D S +Y K + + + + D
Sbjct: 236 --NWKILADNF-NECYHCKSTHPDLTTGL-VDLESYDVYCKADHIQHDPKTPQYRKD--- 288
Query: 272 LGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG-SLKDDKAFIEQ 328
LG + + +PN F + ++ +M +P +PT + ++ + + S ++D I
Sbjct: 289 LGQEICSTYCFPNASFTVTQHFLFMQK--FMPKSPTESVMYYEVWRNKHSSEEDFLLISD 346
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ K +V ED +LCE Q+ +E+ + +G P +E+
Sbjct: 347 TYK---RVMGEDKVLCERAQKNIEAGIFINGELHPRMEK 382
>gi|445487564|ref|ZP_21457835.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
AA-014]
gi|444768454|gb|ELW92669.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
AA-014]
Length = 371
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPIDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|448581619|ref|ZP_21645400.1| Rieske 2Fe-2S family protein [Haloferax gibbonsii ATCC 33959]
gi|445733382|gb|ELZ84952.1| Rieske 2Fe-2S family protein [Haloferax gibbonsii ATCC 33959]
Length = 380
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 164/371 (44%), Gaps = 52/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP +E +VF + W G+ + D D+F+ IG + +V RDD+G + A
Sbjct: 26 PAKYFTDPEVHEMEKEKVFGQYWVYAGHATHIPDAGDYFTRTIGGKQIIVTRDDDGDVRA 85
Query: 94 FHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T G S CPYH W Y LDG+L +
Sbjct: 86 FYNVCAHRGSKMLDDTPMTDPGSLSRITCPYHLWAYELDGSLQSTPKSFEEASLNPDLDD 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ + + +E GL+ + GP V +N E + + E E L +
Sbjct: 146 DAVSELDPEENGLMEVHTDAIGPLVFVNFEDEPSLSLAEQAGSMKTEL-----EDLPLGE 200
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-------DSYSTSL 249
+ + Y+ +ECNWK F NY + H H+ GL+L + Y L
Sbjct: 201 YEHARRYVSE----VECNWKTFSGNYSECD-HCQANHQDWVRGLELMDSELEVNDYHWVL 255
Query: 250 YEKVSIQRCESGSTEGTDDTHRL--GSKAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 256 HYK---------HKEDVDDEMRIHPEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEG 306
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R +++ D YF D L +++ E+ ++ S Q+Q ED L E GL+S A + P+
Sbjct: 307 RFQLIADYYFRDADLSEEE---EKFVQTSRQLQEEDFELVERQYEGLKSGALGQAQLGPN 363
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 364 -EHTVHKLHRL 373
>gi|448567590|ref|ZP_21637515.1| Rieske 2Fe-2S family protein [Haloferax prahovense DSM 18310]
gi|445711588|gb|ELZ63378.1| Rieske 2Fe-2S family protein [Haloferax prahovense DSM 18310]
Length = 380
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 164/371 (44%), Gaps = 52/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP +E +VF + W G+ + D D+F+ IG + +V RDD+G + A
Sbjct: 26 PAKYFTDPEVHEMEKEKVFGQYWVYAGHATHIPDAGDYFTRTIGGKQIIVTRDDDGDVRA 85
Query: 94 FHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T G S CPYH W Y LDG+L +
Sbjct: 86 FYNVCAHRGSKMLDDTPMTDPGSLSRITCPYHLWAYELDGSLQSTPKSFEEASLNPDLDD 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ + + +E GL+ + GP V +N E + + E E L +
Sbjct: 146 DAVSELDPEENGLMEVNTDAIGPLVFVNFEDEPSLSLAEQAGSMKTEL-----EDLPLGE 200
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-------DSYSTSL 249
+ + Y+ +ECNWK F NY + H H+ GL+L + Y L
Sbjct: 201 YEHARRYVSE----VECNWKTFSGNYSECD-HCQANHQDWVRGLELMDSELEVNDYHWVL 255
Query: 250 YEKVSIQRCESGSTEGTDDTHRL--GSKAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 256 HYK---------HKEDVDDEMRIHPEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEG 306
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R +++ D YF D L +++ E+ ++ S Q+Q ED L E GL+S A + P+
Sbjct: 307 RFQLIADYYFRDADLSEEE---EKFVQTSRQLQEEDFELVERQYEGLKSGALGQAQLGPN 363
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 364 -EHTVHKLHRL 373
>gi|389635921|ref|XP_003715613.1| choline monooxygenase [Magnaporthe oryzae 70-15]
gi|351647946|gb|EHA55806.1| choline monooxygenase [Magnaporthe oryzae 70-15]
gi|440476323|gb|ELQ44932.1| choline monooxygenase [Magnaporthe oryzae Y34]
Length = 435
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 167/355 (47%), Gaps = 24/355 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD-DNGKIH 92
P+SWYT +LE +F R W + + ++ +P D+ + +FV+ RD +G+IH
Sbjct: 32 PASWYTSQDMYSLERRAIFSRKWLLTTHKARIPNPGDWVKYNVAGYQFVIVRDRKDGEIH 91
Query: 93 AFHNVCRHHASILATGSGKKSW-FVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
A HN+CRH A + T S+ F C YHGW+YGL G L KA I F+ + GL P
Sbjct: 92 AMHNICRHRAFPVVTKEEGNSYVFSCKYHGWSYGLKGNLAKAPGYQEIPGFDRAQNGLFP 151
Query: 152 LEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG-GSSEILSINGIDSSLSYLCRREY 209
+ V FV +NM +A + E+ +++LG E D Y+ ++
Sbjct: 152 IHVHVDCNGFVWVNM--DAGEKPEI---AWDDDFLGIDRQERFQHYNFD---DYVYDHQW 203
Query: 210 TIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
+E NWK+ DNY + YH P +H + S L+SY + EK IQ + E
Sbjct: 204 DMEGDWNWKILADNY-NECYHCPTSHPDIPSIADLNSYYVNT-EKAYIQHFGEPTEEQIA 261
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFI 326
+ R+ + + +PN +N + +PL P++ ++ ++ + + + D D I
Sbjct: 262 NGFRVAA----TYFWPNASMNVSPHFFMIQRFVPLGPSKSQMRYEVYRNKNSSDADFKTI 317
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
K ++ ED LC Q+ +++ + +G P +E+ F + +T
Sbjct: 318 SDMYK---RIMSEDKYLCANAQKNIDAGVFVNGELHPDLEKGPLFFQKTVREVVT 369
>gi|421480253|ref|ZP_15927891.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|400221447|gb|EJO51903.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 382
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 166/378 (43%), Gaps = 40/378 (10%)
Query: 23 PQIPI------EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR- 75
PQ+P E A T P ++YT LE ++F +W V + +L D + +
Sbjct: 15 PQLPADFCSNPELAWTIPKTYYTSQEVFKLEEEKIFADTWICVAHRSELADANQYVTREV 74
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKAT 134
IGE +VC D + AF+NVC H L GSGK K+ CPYH WT+ LDG L A
Sbjct: 75 IGENVLIVCGKDK-VLRAFYNVCPHRGHQLLEGSGKAKNVITCPYHAWTFKLDGALAHAN 133
Query: 135 RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ F+ + LVP++V + FV +N+ A V + G + + +
Sbjct: 134 NCDHVMAFDKENASLVPVKVEEYAGFVFINLNPNA--------GTVEEQLPGMEARLRAA 185
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ L R NWK DNYL+ YH AH G + +++D Y+ +L+ +
Sbjct: 186 CPVIDDLKLAARFVSETPANWKSIVDNYLE-CYHCGPAHPGFSDSVKIDQYTHTLHGNWT 244
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYA-----FIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+Q G E ++ + +L A + +P M N P D VI P +V
Sbjct: 245 LQ---FGHAESSERSFKLDPSIQDASFQGFWAWPCTMFN-VPPGADFMTVIYEFPVNAEV 300
Query: 310 VFD----YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-------CS 358
YFL+ L D + + + ++ + ED+ L E VQ+GL+S Y
Sbjct: 301 TLQHYDIYFLNEELTDYQKNLIEWYRNV--FRPEDLRLVESVQKGLKSRGYRGQGRIMVD 358
Query: 359 GRYAPSVEQTMYHFHSLL 376
R + E + HFH LL
Sbjct: 359 QRRSGISEHGIAHFHHLL 376
>gi|310801271|gb|EFQ36164.1| Rieske domain-containing protein [Glomerella graminicola M1.001]
Length = 413
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 156/358 (43%), Gaps = 28/358 (7%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E + + P+SWY P LE + R W +V ++ + K DF S + F + +D
Sbjct: 17 ESSRSLPASWYRSPELYQLERRAIISRKWILVTHSLRFKQTGDFLSFVYADFPFFLVQDR 76
Query: 88 NGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ I+ FHNVCRH A ++ SGK S C YHGW+YG G L KA R +K F+ +
Sbjct: 77 DRNINGFHNVCRHRAYPVIEKRSGKASILSCKYHGWSYGYKGNLAKAPRFDTVKGFDKSQ 136
Query: 147 FGLVPLEVAT-WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
GL+P+ V FV +N+ + D V + GG + + D S Y
Sbjct: 137 NGLLPIHVRVDPAGFVWVNL-------QAGDPQVKWEDEFGGVYQKPRMQNFDFSSGYTY 189
Query: 206 RR--EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST 263
+ +E NWK +NY + YH P +H +A L Y +
Sbjct: 190 DHVWDMELEANWKAVIENY-NECYHCPTSHPLIAGVSDLTKYRVEPSGGCLEHEIVNKKA 248
Query: 264 EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
+ +D R ++I F YP+ + + +IP++ TR ++ + + + D +
Sbjct: 249 QDEEDEFR---RSI-TFFYPSTSVTITQNFFYIQRMIPVSATRTRIENEVYRSHTATDAE 304
Query: 324 -----AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
AF +Q L+ ED LC G Q L + + SG P E+ HF + L
Sbjct: 305 FTAINAFYKQILE-------EDRELCIGAQENLNAGVFISGELHPDKEKGPIHFQNTL 355
>gi|260555746|ref|ZP_05827966.1| dioxygenase alpha subunit [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260410657|gb|EEX03955.1| dioxygenase alpha subunit [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452948454|gb|EME53933.1| dioxygenase subunit alpha [Acinetobacter baumannii MSP4-16]
Length = 371
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 166/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V ++ +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHSSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + F+ +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFLFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|184157125|ref|YP_001845464.1| phenylpropionate dioxygenase, large terminal subunit [Acinetobacter
baumannii ACICU]
gi|183208719|gb|ACC56117.1| Phenylpropionate dioxygenase, large terminal subunit [Acinetobacter
baumannii ACICU]
Length = 371
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRIVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|421787471|ref|ZP_16223823.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-82]
gi|410406996|gb|EKP58985.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-82]
Length = 371
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|448621894|ref|ZP_21668643.1| Rieske 2Fe-2S family protein [Haloferax denitrificans ATCC 35960]
gi|445754924|gb|EMA06318.1| Rieske 2Fe-2S family protein [Haloferax denitrificans ATCC 35960]
Length = 380
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 163/371 (43%), Gaps = 52/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP +E +VF + W G+ + D D+F+ IG+ + +V RD +G + A
Sbjct: 26 PAKYFTDPEVHEMEKEKVFGQYWVYAGHETHIPDAGDYFTRTIGDKQIIVTRDGDGDVRA 85
Query: 94 FHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T G S CPYH W Y LDG+L +
Sbjct: 86 FYNVCAHRGSKMLDETPMTDPGSLSRITCPYHLWAYELDGSLQSTPKSFEEASLNPDLDD 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ + + +E GL+ + GP V +N E + + E E L +
Sbjct: 146 DAVSELDPEENGLMEVNTDAIGPLVFVNFEDEPSLSLAEQAGSMKTEL-----EDLPLGE 200
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-------DSYSTSL 249
+ + Y+ +ECNWK F NY + H H+ GL+L + Y L
Sbjct: 201 YEHARRYVSE----VECNWKTFSGNYSECD-HCQANHQDWVRGLELMESELEVNDYHWVL 255
Query: 250 YEKVSIQRCESGSTEGTDDTHRL--GSKAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 256 HYK---------HREDVDDEMRIHPEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEG 306
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R +++ D YF D L D++ E ++ S Q+Q ED L E GL+S A + P+
Sbjct: 307 RFQLIADYYFRDADLSDEE---ENFVQTSRQLQEEDFELVERQYEGLKSGALGQAQLGPN 363
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 364 -EHTVHKLHRL 373
>gi|213156632|ref|YP_002318293.1| dioxygenase subunit alpha [Acinetobacter baumannii AB0057]
gi|215484424|ref|YP_002326657.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AB307-0294]
gi|239501194|ref|ZP_04660504.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AB900]
gi|301347368|ref|ZP_07228109.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AB056]
gi|301511574|ref|ZP_07236811.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AB058]
gi|301594908|ref|ZP_07239916.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AB059]
gi|332855424|ref|ZP_08435864.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332868351|ref|ZP_08438110.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332876335|ref|ZP_08444107.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|384130803|ref|YP_005513415.1| Dioxygenase alpha subunit [Acinetobacter baumannii 1656-2]
gi|384142092|ref|YP_005524802.1| dioxygenase subunit alpha [Acinetobacter baumannii MDR-ZJ06]
gi|385236393|ref|YP_005797732.1| dioxygenase subunit alpha [Acinetobacter baumannii TCDC-AB0715]
gi|387124961|ref|YP_006290843.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|407931731|ref|YP_006847374.1| dioxygenase subunit alpha [Acinetobacter baumannii TYTH-1]
gi|416145456|ref|ZP_11600495.1| phenylpropionate dioxygenase, large terminal subunit [Acinetobacter
baumannii AB210]
gi|417544088|ref|ZP_12195174.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC032]
gi|417548274|ref|ZP_12199355.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-18]
gi|417563818|ref|ZP_12214692.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC143]
gi|417570349|ref|ZP_12221206.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC189]
gi|417572163|ref|ZP_12223017.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Canada BC-5]
gi|417577040|ref|ZP_12227885.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|417870568|ref|ZP_12515523.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH1]
gi|417872526|ref|ZP_12517426.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH2]
gi|417876927|ref|ZP_12521673.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH3]
gi|417882204|ref|ZP_12526511.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH4]
gi|421205084|ref|ZP_15662187.1| dioxygenase subunit alpha [Acinetobacter baumannii AC12]
gi|421535899|ref|ZP_15982155.1| dioxygenase subunit alpha [Acinetobacter baumannii AC30]
gi|421622750|ref|ZP_16063647.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC074]
gi|421626004|ref|ZP_16066836.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC098]
gi|421628005|ref|ZP_16068791.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC180]
gi|421642404|ref|ZP_16082920.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-235]
gi|421649101|ref|ZP_16089497.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-251]
gi|421650735|ref|ZP_16091108.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC0162]
gi|421655932|ref|ZP_16096246.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-72]
gi|421659042|ref|ZP_16099268.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-83]
gi|421665866|ref|ZP_16105965.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC087]
gi|421670443|ref|ZP_16110441.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC099]
gi|421677199|ref|ZP_16117092.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC111]
gi|421686852|ref|ZP_16126596.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-143]
gi|421696479|ref|ZP_16136065.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-692]
gi|421699167|ref|ZP_16138702.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-58]
gi|421701950|ref|ZP_16141436.1| Dioxygenase alpha subunit [Acinetobacter baumannii ZWS1122]
gi|421706280|ref|ZP_16145697.1| Dioxygenase alpha subunit [Acinetobacter baumannii ZWS1219]
gi|421793013|ref|ZP_16229151.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-2]
gi|421796847|ref|ZP_16232901.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-21]
gi|421798926|ref|ZP_16234934.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Canada BC1]
gi|421809595|ref|ZP_16245428.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC035]
gi|424053441|ref|ZP_17790973.1| hypothetical protein W9G_02130 [Acinetobacter baumannii Ab11111]
gi|424062902|ref|ZP_17800387.1| hypothetical protein W9M_00185 [Acinetobacter baumannii Ab44444]
gi|425747545|ref|ZP_18865548.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-348]
gi|425752639|ref|ZP_18870546.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-113]
gi|445403633|ref|ZP_21430724.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-57]
gi|445452683|ref|ZP_21444991.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-A-92]
gi|445457577|ref|ZP_21446565.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC047]
gi|445472686|ref|ZP_21452646.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC338]
gi|445480557|ref|ZP_21455632.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-78]
gi|193076612|gb|ABO11285.2| dioxygenase alpha subunit [Acinetobacter baumannii ATCC 17978]
gi|213055792|gb|ACJ40694.1| dioxygenase alpha subunit [Acinetobacter baumannii AB0057]
gi|213988945|gb|ACJ59244.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AB307-0294]
gi|322507023|gb|ADX02477.1| Dioxygenase alpha subunit [Acinetobacter baumannii 1656-2]
gi|323516891|gb|ADX91272.1| dioxygenase alpha subunit [Acinetobacter baumannii TCDC-AB0715]
gi|332727470|gb|EGJ58898.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332733457|gb|EGJ64636.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332735454|gb|EGJ66509.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|333367002|gb|EGK49016.1| phenylpropionate dioxygenase, large terminal subunit [Acinetobacter
baumannii AB210]
gi|342227310|gb|EGT92244.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH1]
gi|342233537|gb|EGT98259.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH2]
gi|342236831|gb|EGU01334.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH3]
gi|342238182|gb|EGU02617.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii ABNIH4]
gi|347592585|gb|AEP05306.1| dioxygenase alpha subunit [Acinetobacter baumannii MDR-ZJ06]
gi|385879453|gb|AFI96548.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|395550797|gb|EJG16806.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC189]
gi|395555574|gb|EJG21575.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC143]
gi|395570261|gb|EJG30923.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|398325430|gb|EJN41605.1| dioxygenase subunit alpha [Acinetobacter baumannii AC12]
gi|400207731|gb|EJO38701.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Canada BC-5]
gi|400381976|gb|EJP40654.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC032]
gi|400388573|gb|EJP51645.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-18]
gi|404561659|gb|EKA66885.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-692]
gi|404567315|gb|EKA72441.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-143]
gi|404571794|gb|EKA76843.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-58]
gi|404667579|gb|EKB35492.1| hypothetical protein W9G_02130 [Acinetobacter baumannii Ab11111]
gi|404675075|gb|EKB42797.1| hypothetical protein W9M_00185 [Acinetobacter baumannii Ab44444]
gi|407194437|gb|EKE65578.1| Dioxygenase alpha subunit [Acinetobacter baumannii ZWS1219]
gi|407195102|gb|EKE66237.1| Dioxygenase alpha subunit [Acinetobacter baumannii ZWS1122]
gi|407900312|gb|AFU37143.1| dioxygenase subunit alpha [Acinetobacter baumannii TYTH-1]
gi|408506955|gb|EKK08659.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-72]
gi|408509500|gb|EKK11171.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC0162]
gi|408513131|gb|EKK14765.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-235]
gi|408514350|gb|EKK15957.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-251]
gi|408694306|gb|EKL39879.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC074]
gi|408696234|gb|EKL41780.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC098]
gi|408708526|gb|EKL53799.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC180]
gi|408708981|gb|EKL54243.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-83]
gi|409986183|gb|EKO42380.1| dioxygenase subunit alpha [Acinetobacter baumannii AC30]
gi|410385122|gb|EKP37617.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC099]
gi|410388900|gb|EKP41323.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC087]
gi|410393477|gb|EKP45830.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC111]
gi|410398080|gb|EKP50306.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-21]
gi|410398273|gb|EKP50495.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-2]
gi|410411137|gb|EKP63017.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Canada BC1]
gi|410413955|gb|EKP65762.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC035]
gi|425493463|gb|EKU59695.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-348]
gi|425498870|gb|EKU64936.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-113]
gi|444754219|gb|ELW78845.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-A-92]
gi|444769891|gb|ELW94056.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC338]
gi|444771573|gb|ELW95702.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-78]
gi|444776194|gb|ELX00240.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC047]
gi|444782609|gb|ELX06503.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-57]
Length = 371
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|452986234|gb|EME85990.1| hypothetical protein MYCFIDRAFT_52415 [Pseudocercospora fijiensis
CIRAD86]
Length = 423
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 161/354 (45%), Gaps = 21/354 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PS+WYT +LE +F R WQ++ + +L P D+ I +F++ +D G I+
Sbjct: 34 PSNWYTSEEMYSLERRAIFSRKWQLITHKVRLGQPGDWLKFDIAGFQFILVKDRQGNING 93
Query: 94 FHNVCRHHA-SILATG--SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
FHN+CRH A ++ G SG F C YHGW+YGL+G L KA +DF+ + GL+
Sbjct: 94 FHNICRHRAFPVIQPGSDSGCAKIFSCKYHGWSYGLNGRLAKAPGYQDTQDFDKSKNGLL 153
Query: 151 PLEVAT-WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
P+ V FV +N+ + V + +++ + + N D + + +
Sbjct: 154 PIHVRVDHVGFVWVNLDAKEVPEVPWEADF---DGIDKQERYKDFNFDDYIFDHTWQMDG 210
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDT 269
+ NWK+ DNY + YH H + + LDSY V+ + C+ T +
Sbjct: 211 --DYNWKILADNY-NECYHCATTHPDIPAVANLDSYD------VTTKFCQIIHDPATTEE 261
Query: 270 HRLGSKAIYA-FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD-GSLKDDKAFIE 327
R I + + +PN N + +P PTR + + F + S ++D +
Sbjct: 262 QRKKGLIIASTYYFPNVSTNITPHFFMIQRFVPHGPTRSTMSYQVFRNKNSSEEDFQLVN 321
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
K +V ED LC+ Q+ L + + +G P +E+ +F + +T
Sbjct: 322 NIYK---RVMSEDKYLCDQAQKNLNAGVFINGEMHPKMEKGPLYFQKTIRETVT 372
>gi|421675251|ref|ZP_16115176.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC065]
gi|421692909|ref|ZP_16132559.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-116]
gi|404559554|gb|EKA64811.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-116]
gi|410382798|gb|EKP35337.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC065]
Length = 371
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSILRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|444352125|ref|YP_007388269.1| Benzoate 1,2-dioxygenase (EC 1.14.12.10) [Enterobacter aerogenes
EA1509E]
gi|443902955|emb|CCG30729.1| Benzoate 1,2-dioxygenase (EC 1.14.12.10) [Enterobacter aerogenes
EA1509E]
Length = 374
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E R+F SW V + ++ P D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDSQAFEHEKERIFANSWICVAHGSEVARPNDYITREIIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VIVRGRDNILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM +A E V++ + G ++L
Sbjct: 133 NFDSDKATLVPVRLEEYAGFVFINMNPQA---ESVETQLP-----GLQDKVLEACPDVHE 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ K ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGKWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDEETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKALIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADNSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|451995379|gb|EMD87847.1| hypothetical protein COCHEDRAFT_1182859 [Cochliobolus
heterostrophus C5]
Length = 418
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 161/339 (47%), Gaps = 20/339 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WYT LE +F R W ++ + +L +P DF I + VV +D +G+I A
Sbjct: 29 PANWYTSEEMYQLERRAIFTRRWLILTHKSRLANPGDFLRYNIANYDIVVSKDRSGEITA 88
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ G F C YHGW+YGL+G L KA +++F+ + GL P+
Sbjct: 89 FHNVCRHRAYPVVEKDGGNAKIFSCKYHGWSYGLNGNLAKAPGYQELQNFDKAKNGLFPI 148
Query: 153 EVAT-WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
FV +NM + V + +S + + + N D + E
Sbjct: 149 HTRIDRNGFVWINMDSKKVPEVSWESQF---DHVDEQTRFDQFNFDDYEFDHTWNLEGPF 205
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
NWK+ DN+ + YH H L +GL +D S +Y K + + + + D
Sbjct: 206 --NWKILADNF-NECYHCKSTHPDLTTGL-VDLESYDVYCKADHIQHDPKTPQYRKD--- 258
Query: 272 LGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG-SLKDDKAFIEQ 328
LG + + +PN F + ++ +M +P +PT + ++ + + S ++D I
Sbjct: 259 LGQEICSTYCFPNASFTVTQHFLFMQK--FMPKSPTESVMYYEVWRNKHSSEEDFLLISD 316
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ K +V ED +LCE Q+ +E+ + +G P +E+
Sbjct: 317 TYK---RVMGEDKVLCERAQKNIEAGIFINGELHPRMEK 352
>gi|440479282|gb|ELQ60059.1| choline monooxygenase [Magnaporthe oryzae P131]
Length = 436
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 25/356 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD-DNGKIH 92
P+SWYT +LE +F R W + + ++ +P D+ + +FV+ RD +G+IH
Sbjct: 32 PASWYTSQDMYSLERRAIFSRKWLLTTHKARIPNPGDWVKYNVAGYQFVIVRDRKDGEIH 91
Query: 93 AFHNVCRHHASILATGSGKKSW-FVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
A HN+CRH A + T S+ F C YHGW+YGL G L KA I F+ + GL P
Sbjct: 92 AMHNICRHRAFPVVTKEEGNSYVFSCKYHGWSYGLKGNLAKAPGYQEIPGFDRAQNGLFP 151
Query: 152 LEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG-GSSEILSINGIDSSLSYLCRREY 209
+ V FV +NM +A + E+ +++LG E D Y+ ++
Sbjct: 152 IHVHVDCNGFVWVNM--DAGEKPEI---AWDDDFLGIDRQERFQHYNFD---DYVYDHQW 203
Query: 210 TIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
+E NWK+ DNY + YH P +H + S L+SY + EK IQ + E
Sbjct: 204 DMEGDWNWKILADNY-NECYHCPTSHPDIPSIADLNSYYVNT-EKAYIQHFGEPTEEQIA 261
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGP-WMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAF 325
+ R+ + + +PN +N P + +PL P++ ++ ++ + + + D D
Sbjct: 262 NGFRVAA----TYFWPNASMNVSKPHFFMIQRFVPLGPSKSQMRYEVYRNKNSSDADFKT 317
Query: 326 IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
I K ++ ED LC Q+ +++ + +G P +E+ F + +T
Sbjct: 318 ISDMYK---RIMSEDKYLCANAQKNIDAGVFVNGELHPDLEKGPLFFQKTVREVVT 370
>gi|149924891|ref|ZP_01913225.1| hypothetical protein PPSIR1_09400 [Plesiocystis pacifica SIR-1]
gi|149814244|gb|EDM73853.1| hypothetical protein PPSIR1_09400 [Plesiocystis pacifica SIR-1]
Length = 385
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 176/386 (45%), Gaps = 49/386 (12%)
Query: 14 AQKLVYEF-NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFF 72
A++L+ E + P+++A T P+S Y P ALE+ +F + W VG +Q++ P+ F
Sbjct: 6 ARRLLAELAQTRAPLDEARTLPASAYRSPELFALEMRELFAKMWLCVGREEQVEAPRAFI 65
Query: 73 SGRIGEVE---FVVCRDDNGKIHAFHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDG 128
+ +G + ++ RDD G + AF+NVCRH A+ ++ G CPYH W+YGLDG
Sbjct: 66 THALGPEDRERALIVRDDAGTLRAFYNVCRHRAARLIDAPRGSLRAINCPYHKWSYGLDG 125
Query: 129 TLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV--VANEWLG 186
L A R F+ L+ + +A + + +N+ A +E+ +++ A+ LG
Sbjct: 126 RLRHAPRTDA--SFDCAAHSLIEMPLAVFEGHIYVNLDAHAPPREQAHADLPSAASHRLG 183
Query: 187 GSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL---------- 236
L R +YT+ NWKV +NY + YH H L
Sbjct: 184 -------------ELRVARRHDYTVAANWKVVIENYGEC-YHCAVIHPQLHRLSDFQGGA 229
Query: 237 -ASGLQLDSYSTSLYEKVSIQRCES----GSTEGTDDTHRLGSKAIYAFIYPNFMINRYG 291
G + L E V G G + R + Y +YPNF + +
Sbjct: 230 FVEGACFNGGPMRLREGVQTLSMSGASPLGPIPGLAEADR--DQVHYNHVYPNFTLALHP 287
Query: 292 PWMDTNLVIPLAPTRCKV-----VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEG 346
++ T+ V PL+P + +V V+ L+G D + I L+ ++ +D +C
Sbjct: 288 DYVLTHTVWPLSPEQTRVHCEWLVWPAALEGEAPADLSDI---LEFWDRTNRQDWDMCAR 344
Query: 347 VQRGLESPAYCSGRYAPSVEQTMYHF 372
VQ+GL S Y G Y ++E+ ++ F
Sbjct: 345 VQQGLRSAGYRRGPYT-AMERCIHAF 369
>gi|417554508|ref|ZP_12205577.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-81]
gi|417562805|ref|ZP_12213684.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC137]
gi|421200995|ref|ZP_15658154.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC109]
gi|421456524|ref|ZP_15905866.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-123]
gi|421632745|ref|ZP_16073392.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-13]
gi|421803392|ref|ZP_16239310.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-A-694]
gi|395525387|gb|EJG13476.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC137]
gi|395563027|gb|EJG24680.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC109]
gi|400210952|gb|EJO41916.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
IS-123]
gi|400390925|gb|EJP57972.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-81]
gi|408708453|gb|EKL53727.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
Naval-13]
gi|410412983|gb|EKP64827.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-A-694]
Length = 371
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEVIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G+ L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|259416940|ref|ZP_05740860.1| rieske domain protein [Silicibacter sp. TrichCH4B]
gi|259348379|gb|EEW60156.1| rieske domain protein [Silicibacter sp. TrichCH4B]
Length = 384
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 162/370 (43%), Gaps = 35/370 (9%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ +A P++ Y DP A E V + SW VG+ + +P D V ++ RD
Sbjct: 14 VNRANGLPNAHYIDPVVFAEERASVLFASWSGVGFGKDIPEPGDAKPVEFLGVPLLLVRD 73
Query: 87 DNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI-----K 140
+G IH + N CRH IL + + CPYH W Y L G L A + G+ +
Sbjct: 74 QDGAIHVYQNTCRHRGMILVEEAKNIRGTIRCPYHSWCYSLKGQLRAAPHVGGVGQNTHE 133
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
D + E GLV W + +N+ +A EEV + ++ + W L G +SS
Sbjct: 134 DVKMAELGLVSFRAHVWQDVIFVNIDGKAAPFEEVHAELL-DRWQ-EFDRPLHHGGPESS 191
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQ--- 256
L + + NWK+ +NY + YH+P+ H GL S +L D Y+ K S Q
Sbjct: 192 L------KLEVNTNWKLAVENYCE-SYHLPWVHPGLNSYSRLEDHYNIESPGKYSGQGTL 244
Query: 257 ---RCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ E D L K Y +YPN ++ G D I L P C+
Sbjct: 245 VYRQLRGAEGEVFPDFDALSDKWTTGGEYVAVYPNVLL---GVQRDHTFAIVLEPRSCEQ 301
Query: 310 VFD----YFLDGSLKDDK--AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
+ Y+ S + + Q+ + + V EDI + EG+Q+G P + GR++P
Sbjct: 302 TVEHIELYYAKSSAETPELDPLRHQNAQLWKTVFEEDIFVVEGMQKGRHGPMFDGGRFSP 361
Query: 364 SVEQTMYHFH 373
+++ ++FH
Sbjct: 362 AMDGPTHNFH 371
>gi|134101047|ref|YP_001106708.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Saccharopolyspora erythraea NRRL 2338]
gi|133913670|emb|CAM03783.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Saccharopolyspora erythraea NRRL 2338]
Length = 372
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 169/374 (45%), Gaps = 25/374 (6%)
Query: 26 PIEKAL-TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
P E L T P +YTDP+ +LE R+F W D L P F + +IG ++
Sbjct: 6 PTESLLATLPGHYYTDPAIFSLEQSRIFEEQWFCAVRCDDLDKPGAFRTVQIGRESVLIA 65
Query: 85 RDDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
R +G I+AF N+CRH + L T G ++S F CPYH WTYGLDG L+ A + + D
Sbjct: 66 RGRDGAINAFLNICRHRGARLCTEEKGEVRRS-FQCPYHAWTYGLDGKLIAAPNLNDMPD 124
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKE-AVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+ EFGL L V W + + + ++ + V S+V A LG + +IN D +
Sbjct: 125 IDRTEFGLNRLHVREWLGYAWVCLAEDPPSFDDTVVSDVTAR--LGDAG---AINSYDIT 179
Query: 201 LSYLCRR-EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQR 257
L +R EY ++ NWK +N+++ YH H L L D ++ Y +
Sbjct: 180 ALKLGKRIEYDVKANWKQIIENFME-CYHCATIHPELTEVLPEFADGFAAQYYVGHGAEF 238
Query: 258 CESG---STEGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRC 307
E + +G++ RL + YA + P IN + + + P+AP R
Sbjct: 239 GEDVQGFTVDGSEGLERLPGVTEDQDRRYYAITVRPQVFINLVPDHVIFHRMFPVAPDRT 298
Query: 308 KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ D+ + + + +S++ ++V +D CE Q ++S Y G E
Sbjct: 299 LIECDWLYLPEVVESGRDLSRSVELFDRVNRQDFDACERCQLAMDSRGYSKGGVFVPSEY 358
Query: 368 TMYHFHSLLHCNLT 381
+ FH + L
Sbjct: 359 HIAEFHDWVQKELA 372
>gi|414164054|ref|ZP_11420301.1| hypothetical protein HMPREF9697_02202 [Afipia felis ATCC 53690]
gi|410881834|gb|EKS29674.1| hypothetical protein HMPREF9697_02202 [Afipia felis ATCC 53690]
Length = 394
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 170/366 (46%), Gaps = 39/366 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ +A P+ YTD + EL +F + W VG +Q+ + D+FS + + +V R
Sbjct: 17 PLRQAGPLPAWCYTDSDWYERELETIFRKEWLCVGRVEQIPNTGDYFSIEVIKQPLIVVR 76
Query: 86 D-DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLL----KATRITGIK 140
D D ++H VCRH +I+ G GK FVCPYH WTY L+G L+ + G++
Sbjct: 77 DGDAVRVHL--GVCRHRGAIITQGKGKCRSFVCPYHSWTYALNGRLVGIPGSPHPLAGVE 134
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
DF+ ++GL+P+ WG F+ + EA WLG ++ +D
Sbjct: 135 DFSNDDYGLIPIRSEVWGGFIFITFNAEA---------PALKTWLGDLPAFVADYNLD-Q 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL-----ASGLQLDSYS---TSLYEK 252
+ + EY ++CNWKV+ +N + YHV H+ Q + S S++ K
Sbjct: 185 MQWTHVDEYEVDCNWKVWLENAFE-NYHVATVHRQHYDPKNPQNWQFERPSGPWESMFSK 243
Query: 253 VSIQRCESGSTE--GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
S+ SG E G D ++G I+ + P+ I +M +P P + ++
Sbjct: 244 RSVV-AYSGLPEIAGLSDDRKVGLYHIW--LQPSLQIIITSSYMKYRQYLPEGPNKLRLY 300
Query: 311 FDYFLDGSLKDDKAF-----IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSV 365
++ S + F E K S Q+ ED+ + VQ+ ++S A+ GR+ S+
Sbjct: 301 ENWTFPRSTVERSDFNVIVGPEYYYKYS-QIIREDLTINPNVQKAMQSGAFRPGRF--SL 357
Query: 366 EQTMYH 371
E+ + H
Sbjct: 358 EEYVVH 363
>gi|432815496|ref|ZP_20049281.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE115]
gi|431364552|gb|ELG51083.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE115]
Length = 374
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A EE + G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATSVEE--------QLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|374983124|ref|YP_004958619.1| putative ring hydroxylating dioxygenase subunit [Streptomyces
bingchenggensis BCW-1]
gi|297153776|gb|ADI03488.1| putative ring hydroxylating dioxygenase subunit [Streptomyces
bingchenggensis BCW-1]
Length = 373
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 160/359 (44%), Gaps = 20/359 (5%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ ALE RVF W V + L +P F + ++G ++ R +G + F N+
Sbjct: 19 YTDPAIFALEQERVFEAMWFCVARSADLAEPGQFRTYQVGRESVLISRSRDGSVKGFLNI 78
Query: 98 CRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
CRH + L A+G K++ F CPYH WTYGLDG L+ A +T + D + E+GLV + +
Sbjct: 79 CRHRGAKLCLEASGEVKRA-FQCPYHAWTYGLDGKLVAAPNLTSMPDIDRGEYGLVNVHI 137
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECN 214
W +V ++ +A E D E LG + I N +L R Y ++ N
Sbjct: 138 REWLGYVWASLA-DAPPSFEQDVIGAVIERLGDVAAI--DNYRIENLEVGRRITYDVKAN 194
Query: 215 WKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYE------KVSIQRCESGSTEGT 266
WK+ +N+++ YH H L L D Y+ Y +Q EG
Sbjct: 195 WKLIVENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGADVQGFTVDGGEGL 253
Query: 267 DDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDD 322
D +G + YA + P IN + + + P+AP R V D+ + +
Sbjct: 254 DRIPGVGEDQDRRYYAITVRPQVFINLVPDHVIFHRMYPMAPDRTVVECDWLYLPHVVES 313
Query: 323 KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
+ +S++ +V +D CE Q + S AY G E + FH+ L L+
Sbjct: 314 GQDVTRSVELFHRVNQQDFDACERTQPAMSSRAYAKGGVLVPSEHHIGAFHTWLQNKLS 372
>gi|452961025|gb|EME66333.1| ring hydroxylating dioxygenase [Rhodococcus ruber BKS 20-38]
Length = 369
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 151/356 (42%), Gaps = 29/356 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+E T P+ +Y P ALE ++F RSWQ + + P D+ R G + +V
Sbjct: 23 LEAGETLPAPYYFAPEIHALEQEKIFSRSWQYACHESAVAKPGDYAVTRAGSIPIIVTHG 82
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G++ F NVCRH +A +G K CPYHGWTYGLDG L A R +F+
Sbjct: 83 RDGELRGFVNVCRHRLHAIAEENGNKPLLQCPYHGWTYGLDGKLKTAPRSQREPNFDCST 142
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L P+ V W +V +N A V + + +N + R
Sbjct: 143 ISLEPVSVERWDQWVFVNPDPNAASLASVTAGI--------RERTDELNADLRRYEFQVR 194
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKG--------LASGLQLDSYSTSLYEKVSIQRC 258
EY +ECNWK++ +N ++ YH P HK +DS ++++ ++
Sbjct: 195 YEYDMECNWKLWAENAVE-CYHCPTLHKASFGRTYHTSPDDYAVDSDESTIWHTGPLKWL 253
Query: 259 ESGSTEGTDDTHRLGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
+ R +AF +P+ F ++ Y ++ + V P+ P +C D +
Sbjct: 254 PGDADPAAHKGFR------FAFTFPSSFFALDDYVGFVGS--VQPVGPEKCWAFVDMYAK 305
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
D A +++ L+ +Q +ED + Q G S +GR E + F
Sbjct: 306 PGA--DPALVKEWLEMWDQTLVEDKRATDIQQLGYNSGKVRAGRLLLDSESPLQSF 359
>gi|387607421|ref|YP_006096277.1| putative oxidoreductase [Escherichia coli 042]
gi|284921721|emb|CBG34793.1| putative oxidoreductase [Escherichia coli 042]
Length = 374
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 165/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A+ V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNAIS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|293410111|ref|ZP_06653687.1| dioxygenase [Escherichia coli B354]
gi|291470579|gb|EFF13063.1| dioxygenase [Escherichia coli B354]
Length = 374
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 166/368 (45%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + F+ +NM E ++ V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFIFINM--------EPNATSVEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|194434946|ref|ZP_03067190.1| Rieske 2Fe-2S domain protein [Shigella dysenteriae 1012]
gi|417672311|ref|ZP_12321782.1| rieske domain protein [Shigella dysenteriae 155-74]
gi|194416834|gb|EDX32959.1| Rieske 2Fe-2S domain protein [Shigella dysenteriae 1012]
gi|332093286|gb|EGI98345.1| rieske domain protein [Shigella dysenteriae 155-74]
Length = 374
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMAPNATS--------VEDQLPGLGAKVLEACPKVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|70983840|ref|XP_747446.1| Rieske 2Fe-2S family protein [Aspergillus fumigatus Af293]
gi|66845072|gb|EAL85408.1| Rieske 2Fe-2S family protein, putative [Aspergillus fumigatus
Af293]
gi|159123575|gb|EDP48694.1| Rieske 2Fe-2S family protein, putative [Aspergillus fumigatus
A1163]
Length = 414
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 21/348 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PSSWYT LE +F R W + + +L +P D+ + +FV+ +D +G I+A
Sbjct: 25 PSSWYTSQEMYELERRAIFSRKWLLTTHKLRLPNPGDWLRYEVSGFQFVLVKDRDGNINA 84
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ G F C YHGW+YGL+G L KA + F+ + GL+P+
Sbjct: 85 FHNVCRHRAFPVVTEEKGTSRIFACKYHGWSYGLNGKLAKAPGYQELDGFDKSKNGLLPI 144
Query: 153 EV---ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRRE 208
V A +V L+ G++ E D G + + ++ E
Sbjct: 145 HVHIDANGFIWVNLDAGEKPEVAWEDD--------FKGMDRLPRYEHVKWDDFAFDHTWE 196
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
E NWK+ DNY + YH P H + S L +YS + + I S +
Sbjct: 197 QEGEYNWKILADNY-NECYHCPTTHPDIPSIADLSAYSVEVRDGGIIHDGRSKPEQVA-- 253
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
G F +PN + + +PL+PTR + ++ + + D+ E+
Sbjct: 254 ---AGLNPASTFFFPNASLTVSPHFFFMQRFVPLSPTRSIMKYEVYRNTKSSDED--FEK 308
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ +++ ED LC+ Q+ L + + +G P +E+ +F +
Sbjct: 309 INQIYKRIMSEDKYLCDLTQKNLNAGVFVNGELHPEMEKGPLYFQKTV 356
>gi|433092210|ref|ZP_20278484.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE138]
gi|431610756|gb|ELI80040.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE138]
Length = 374
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGLAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|425174384|ref|ZP_18572555.1| hypothetical protein ECFDA504_2693 [Escherichia coli FDA504]
gi|429020762|ref|ZP_19087337.1| rieske domain protein [Escherichia coli 96.0428]
gi|408093182|gb|EKH26281.1| hypothetical protein ECFDA504_2693 [Escherichia coli FDA504]
gi|427278746|gb|EKW43202.1| rieske domain protein [Escherichia coli 96.0428]
Length = 374
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 165/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R + NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRMPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|82776968|ref|YP_403317.1| hypothetical protein SDY_1706 [Shigella dysenteriae Sd197]
gi|309788590|ref|ZP_07683191.1| rieske domain protein [Shigella dysenteriae 1617]
gi|81241116|gb|ABB61826.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308923521|gb|EFP69027.1| rieske domain protein [Shigella dysenteriae 1617]
Length = 374
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 165/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R + NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRMPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|292493947|ref|YP_003533089.1| Rieske 2Fe-2S family protein [Haloferax volcanii DS2]
gi|448289399|ref|ZP_21480570.1| Rieske 2Fe-2S family protein [Haloferax volcanii DS2]
gi|448594535|ref|ZP_21652882.1| Rieske 2Fe-2S family protein [Haloferax alexandrinus JCM 10717]
gi|291369386|gb|ADE01616.1| Rieske 2Fe-2S family protein [Haloferax volcanii DS2]
gi|445582480|gb|ELY36821.1| Rieske 2Fe-2S family protein [Haloferax volcanii DS2]
gi|445744171|gb|ELZ95650.1| Rieske 2Fe-2S family protein [Haloferax alexandrinus JCM 10717]
Length = 380
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 162/371 (43%), Gaps = 52/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP +E +VF R W G+ + D D+F+ IG+ + +V RD G + A
Sbjct: 26 PARYFTDPEVHEMEKEKVFGRYWVYAGHETHIPDAGDYFTRTIGDKQIIVTRDGEGDVRA 85
Query: 94 FHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T G S CPYH W Y LDG+L +
Sbjct: 86 FYNVCAHRGSKMLDDTPMTDPGSLSRITCPYHLWAYELDGSLQSTPKSFEEASLNPDLDD 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ + + +E GL+ + GP V +N E + + E E L +
Sbjct: 146 DAVSELDPEENGLMEVNTDAIGPLVFVNFEDEPSLSLAEQAGEMKTEL-----EDLPLGE 200
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-------DSYSTSL 249
+ + Y+ +ECNWK F NY + H H+ GL+L + Y L
Sbjct: 201 YEHARRYVSE----VECNWKTFSGNYSECD-HCQANHQDWVQGLELMESELEVNDYHWVL 255
Query: 250 YEKVSIQRCESGSTEGTDDTHRL--GSKAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 256 HYK---------HKEDVDDEMRIHPEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEG 306
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R +++ D YF D L +++ E+ ++ S Q+Q ED L E GL S A + P+
Sbjct: 307 RFQLIADYYFRDSELSEEE---EKFVQTSRQLQEEDFELVERQYEGLTSGALGQAQLGPN 363
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 364 -EHTVHKLHRL 373
>gi|448568558|ref|ZP_21638092.1| Rieske 2Fe-2S family protein [Haloferax lucentense DSM 14919]
gi|445725908|gb|ELZ77526.1| Rieske 2Fe-2S family protein [Haloferax lucentense DSM 14919]
Length = 380
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 162/371 (43%), Gaps = 52/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP +E +VF R W G+ + D D+F+ IG+ + +V RD G + A
Sbjct: 26 PARYFTDPEVHEMEKEKVFGRYWVYAGHETHIPDAGDYFTRTIGDKQIIVTRDGEGDVRA 85
Query: 94 FHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T G S CPYH W Y LDG+L +
Sbjct: 86 FYNVCAHRGSKMLDDTPMTDPGSLSRITCPYHLWAYELDGSLQSTPKSFEEASLNPDLDD 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ + + +E GL+ + GP V +N E + + E E L +
Sbjct: 146 DAVSELDPEENGLMEVNTDAIGPLVFVNFEDEPSLSLAEQAGKMKTEL-----EDLPLGE 200
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-------DSYSTSL 249
+ + Y+ +ECNWK F NY + H H+ GL+L + Y L
Sbjct: 201 YEHARRYVSE----VECNWKTFSGNYSECD-HCQANHQDWVQGLELMESELEVNDYHWVL 255
Query: 250 YEKVSIQRCESGSTEGTDDTHRL--GSKAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 256 HYK---------HKEDVDDEMRIHPEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEG 306
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R +++ D YF D L +++ E+ ++ S Q+Q ED L E GL S A + P+
Sbjct: 307 RFQLIADYYFRDSELSEEE---EKFVQTSRQLQEEDFELVERQYEGLTSGALGQAQLGPN 363
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 364 -EHTVHKLHRL 373
>gi|417639336|ref|ZP_12289486.1| rieske domain protein [Escherichia coli TX1999]
gi|419170358|ref|ZP_13714248.1| rieske domain protein [Escherichia coli DEC7A]
gi|419181008|ref|ZP_13724625.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC7C]
gi|419186442|ref|ZP_13729959.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC7D]
gi|419191729|ref|ZP_13735189.1| rieske domain protein [Escherichia coli DEC7E]
gi|420385793|ref|ZP_14885152.1| rieske domain protein [Escherichia coli EPECa12]
gi|427804932|ref|ZP_18971999.1| hypothetical protein BN16_23411 [Escherichia coli chi7122]
gi|427809489|ref|ZP_18976554.1| hypothetical protein BN17_20541 [Escherichia coli]
gi|433130328|ref|ZP_20315773.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE163]
gi|433135030|ref|ZP_20320384.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE166]
gi|443617879|ref|YP_007381735.1| dioxygenase subunit alpha yeaW [Escherichia coli APEC O78]
gi|345393734|gb|EGX23503.1| rieske domain protein [Escherichia coli TX1999]
gi|378016589|gb|EHV79469.1| rieske domain protein [Escherichia coli DEC7A]
gi|378024376|gb|EHV87030.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC7C]
gi|378030146|gb|EHV92750.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC7D]
gi|378039672|gb|EHW02160.1| rieske domain protein [Escherichia coli DEC7E]
gi|391306039|gb|EIQ63804.1| rieske domain protein [Escherichia coli EPECa12]
gi|412963114|emb|CCK47032.1| hypothetical protein BN16_23411 [Escherichia coli chi7122]
gi|412969668|emb|CCJ44306.1| hypothetical protein BN17_20541 [Escherichia coli]
gi|431647376|gb|ELJ14860.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE163]
gi|431657893|gb|ELJ24855.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE166]
gi|443422387|gb|AGC87291.1| dioxygenase subunit alpha yeaW [Escherichia coli APEC O78]
Length = 374
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVQD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|302883955|ref|XP_003040875.1| hypothetical protein NECHADRAFT_53334 [Nectria haematococca mpVI
77-13-4]
gi|256721768|gb|EEU35162.1| hypothetical protein NECHADRAFT_53334 [Nectria haematococca mpVI
77-13-4]
Length = 357
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 155/340 (45%), Gaps = 22/340 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY P LE +F + W ++ + + K+ D+ S E F + RD +G I+
Sbjct: 22 PASWYRSPEIYQLERRAIFSKKWILLTHMLRFKEAGDYLSFTYAEFPFFLIRDRDGNING 81
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH A I+ SGK C YHGW+YG G L KA R + DF+ + GL+P+
Sbjct: 82 FHNACRHRAYPIVQNESGKARVLSCKYHGWSYGFKGNLAKAPRFDTVPDFDKSQHGLLPI 141
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
V F+ +N+ + +E + + S+ + S + D S+ E I
Sbjct: 142 NVHVDKTGFIWVNL-QAGTPEEPWEKQFPG---VDESARMTSYD-FDGGYSFDHVWEMDI 196
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY----STSLYEKVSIQRCESGSTEGTD 267
+ NWK +NY + YH P +H +A L Y S S E I + E +GTD
Sbjct: 197 DSNWKGVMENY-NECYHCPTSHPLIAGVSDLTKYKVEPSGSCLEHTIINKKED---DGTD 252
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
+ R F +P+ + + +IP++ T+ K+ + + + D++
Sbjct: 253 EFKR-----SITFFFPSTSVTVTMNFFYIQRMIPISETKTKIENEIYRHHAANDEE--FA 305
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ +QV ED LC G Q+ L + + +G P E+
Sbjct: 306 SIMAFYKQVLTEDKDLCNGTQKNLNAGVFLNGELHPEKEK 345
>gi|300904665|ref|ZP_07122500.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 84-1]
gi|301305898|ref|ZP_07211981.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 124-1]
gi|415861284|ref|ZP_11534950.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 85-1]
gi|300403415|gb|EFJ86953.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 84-1]
gi|300838824|gb|EFK66584.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 124-1]
gi|315257387|gb|EFU37355.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 85-1]
Length = 374
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVQD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|82543795|ref|YP_407742.1| hypothetical protein SBO_1286 [Shigella boydii Sb227]
gi|187731158|ref|YP_001880594.1| Rieske (2Fe-2S) domain-containing protein [Shigella boydii CDC
3083-94]
gi|416303060|ref|ZP_11653468.1| dioxygenase alpha subunit [Shigella flexneri CDC 796-83]
gi|417681639|ref|ZP_12331012.1| rieske domain protein [Shigella boydii 3594-74]
gi|420325251|ref|ZP_14827018.1| rieske domain protein [Shigella flexneri CCH060]
gi|420352830|ref|ZP_14853959.1| rieske domain protein [Shigella boydii 4444-74]
gi|421682251|ref|ZP_16122065.1| 2Fe-2S cluster-containing protein [Shigella flexneri 1485-80]
gi|81245206|gb|ABB65914.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187428150|gb|ACD07424.1| Rieske 2Fe-2S domain protein [Shigella boydii CDC 3083-94]
gi|320183818|gb|EFW58651.1| dioxygenase alpha subunit [Shigella flexneri CDC 796-83]
gi|332096390|gb|EGJ01387.1| rieske domain protein [Shigella boydii 3594-74]
gi|391253432|gb|EIQ12607.1| rieske domain protein [Shigella flexneri CCH060]
gi|391280710|gb|EIQ39374.1| rieske domain protein [Shigella boydii 4444-74]
gi|404340723|gb|EJZ67141.1| 2Fe-2S cluster-containing protein [Shigella flexneri 1485-80]
Length = 374
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTSANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|418043995|ref|ZP_12682144.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli W26]
gi|383472946|gb|EID64976.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli W26]
Length = 374
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYC-SGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYLGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|67903338|ref|XP_681925.1| hypothetical protein AN8656.2 [Aspergillus nidulans FGSC A4]
gi|40741500|gb|EAA60690.1| hypothetical protein AN8656.2 [Aspergillus nidulans FGSC A4]
gi|259483125|tpe|CBF78242.1| TPA: Rieske 2Fe-2S family protein, putative (AFU_orthologue;
AFUA_8G06450) [Aspergillus nidulans FGSC A4]
Length = 431
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 39/357 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F R W + + +L + D+ + +FV+ RD G+I+A
Sbjct: 29 PASWYTSQEMFELERRAIFSRKWLMTTHKLRLPNAGDWLRYEVAGFQFVLVRDRQGQINA 88
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN+CRH A ++ G F C YHGW+YGL+G L KA + F+ + GL+P+
Sbjct: 89 FHNICRHRAFPVVTEDQGSSRIFACKYHGWSYGLNGKLAKAPGYQDLDGFDKSKNGLLPI 148
Query: 153 EV--ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS--LSYLCRRE 208
V +G F+ +N+ +A + E+ W +GID + Y+ +
Sbjct: 149 HVHIDRYG-FIWVNL--DAKEEPEI-------AWED------DFDGIDQQPRMDYINWDD 192
Query: 209 YTI--------ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
Y + NWK+ DNY + YH H + + L +YS + I S
Sbjct: 193 YVFDHTWEQGGDFNWKILADNY-NECYHCATTHPDIPAVADLSTYSVDTKDGSIIHDAHS 251
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLK 320
+ G + + +PN +N + T +P++PT+ + ++ + + +
Sbjct: 252 KPEQVA-----AGLQVAATYYFPNASMNVTPNFFFTQRFVPISPTKTSMQYEVYRNKNAS 306
Query: 321 D-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
D D + Q K ++ ED LC Q+ L + + +G P++E+ +F ++
Sbjct: 307 DADFDLVNQMYK---RIMSEDKYLCAYAQKNLNAGVFVNGELHPTMEKGPLYFQKVV 360
>gi|432602321|ref|ZP_19838565.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE66]
gi|431140895|gb|ELE42660.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE66]
Length = 374
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSIQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|134099692|ref|YP_001105353.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Saccharopolyspora erythraea NRRL 2338]
gi|133912315|emb|CAM02428.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Saccharopolyspora erythraea NRRL 2338]
Length = 378
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 165/365 (45%), Gaps = 24/365 (6%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P T P +YTDP+ +LE R+F W D L P F + +IG ++ R
Sbjct: 7 PQSLMATLPGHYYTDPAIFSLEQSRIFEEQWFCAVRCDDLDKPGAFRTVQIGRESVLIAR 66
Query: 86 DDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
+G I+AF N+CRH + L T G ++S F CPYH WTYGLDG L+ A + + D
Sbjct: 67 GRDGAINAFLNICRHRGARLCTEEKGEVRRS-FQCPYHAWTYGLDGKLIAAPNLNDMPDI 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKE-AVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
+ EFGL L V W + + + ++ + V S+V A LG + +IN D +
Sbjct: 126 DRTEFGLNRLHVREWLGYAWVCLAEDPPSFDDTVVSDVTAR--LGDAG---AINSYDITA 180
Query: 202 SYLCRR-EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQRC 258
L +R EY ++ NWK +N+++ YH H L L D ++ Y +
Sbjct: 181 LKLGKRIEYDVKANWKQIIENFME-CYHCATIHPELTEVLPEFADGFAAQYYVGHGAEFG 239
Query: 259 ESG---STEGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCK 308
E + +G++ RL + YA + P IN + + + P+AP R
Sbjct: 240 EDVQGFTVDGSEGLERLPGVTEDQDRRYYAITVRPQVFINLVPDHVIFHRMFPVAPDRTL 299
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
+ D+ + + + +S++ ++V +D CE Q ++S Y G E
Sbjct: 300 IECDWLYLPEVVESGRDLSRSVELFDRVNRQDFDACERCQLAMDSRGYSKGGVFVPSEHH 359
Query: 369 MYHFH 373
+ FH
Sbjct: 360 IAEFH 364
>gi|420347043|ref|ZP_14848449.1| rieske domain protein [Shigella boydii 965-58]
gi|432834792|ref|ZP_20068331.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE136]
gi|391272135|gb|EIQ30992.1| rieske domain protein [Shigella boydii 965-58]
gi|431385152|gb|ELG69139.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE136]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCDPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|115491209|ref|XP_001210232.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197092|gb|EAU38792.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 417
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 22/354 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F + W + ++ +LK+ D+ I +F++ RD +GKI+A
Sbjct: 32 PASWYTSQEMYELERRAIFSKRWLFITHSSRLKNTGDWLRYEIAGFDFIITRDRDGKINA 91
Query: 94 FHNVCRHHA--SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
FHNVCRH A + G G C YHGW+YGL+G L KA + F+ + GL
Sbjct: 92 FHNVCRHRAYPVVEKEGQGNNKILACRYHGWSYGLNGKLAKAPGYQDLDGFDKDQNGLFR 151
Query: 152 LEVAT-WGPFVLLNM-GKEA--VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
+ V F+ +NM KE V EE +V E + + + D +Y
Sbjct: 152 IHVKVDINGFIWVNMDAKETPEVPWEEHFKDVDKQE----RYKPYNFDEYDLDHTYQLDG 207
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
Y NWK+ DN+ + YH P H + + LDS+ + + + C+S T
Sbjct: 208 NY----NWKILADNF-NECYHCPTTHPDIPDFINLDSFDSDVKDGHIQHHCKS-----TP 257
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
+ G + +PN + ++ +P P + + ++ + + + D A +
Sbjct: 258 EQLAQGLNVASTYYFPNASMTISAHFIMVQKFLPKGPNKSTMAYEIYRNRNSSD--ADFK 315
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
+ + +V ED +LC+ Q+ L+ + +G+ P E+ F + + +T
Sbjct: 316 RISEMYARVMGEDKVLCDNAQKNLDRGVFVNGQLHPKFEKAPLFFQNTVREVIT 369
>gi|448296486|ref|ZP_21486543.1| putative dioxygenase subunit alpha YeaW [Halalkalicoccus jeotgali
B3]
gi|445581437|gb|ELY35794.1| putative dioxygenase subunit alpha YeaW [Halalkalicoccus jeotgali
B3]
Length = 378
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 166/366 (45%), Gaps = 44/366 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP+ +E ++F R W G+ +++P D+F+ IG + V+ RD + +I A
Sbjct: 26 PARYFTDPAVHEMEKEKIFSRYWMYAGHATTIEEPGDYFTRTIGGKQIVIVRDKDREIRA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLLK-------ATRITGIKD 141
F+NVC H S + T G + CPYH WTY LDG L A ++D
Sbjct: 86 FYNVCAHRGSKMVEDTPMTDPGNTNGIRCPYHLWTYDLDGRLRSTPQSFETAGMNRDLED 145
Query: 142 FNVKEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+V E GL+ + + + GP V +N D E G E L
Sbjct: 146 EDVPELDPKRNGLMEVHLDSIGPLVFVNFA---------DDPAPLAEQAGTLKEELESFP 196
Query: 197 IDSSLSYLCRREYT--IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
++ Y R Y +ECNWK F NY + H H+ G+ L + +
Sbjct: 197 LE---EYELARRYVSEVECNWKTFSGNYSECD-HCQANHQDWIKGISLAESELVVDDHYW 252
Query: 255 IQRCESGSTEGTD-DTHRLGSKAIYAFIYPNFMINRYG--PWMDTNLVIPLAPTRCKVVF 311
+ EG + D + +A + + +PNF +N YG T ++ P+ R +++
Sbjct: 253 V--LHYTHDEGVEADEALVEGEARFYYFWPNFTLNMYGNADGYGTYIIDPIDEGRFQLIA 310
Query: 312 D-YFLDGSLKDDKA-FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D YF D L D++A F++ S K +Q ED L E GL+S A G+ P+ E T+
Sbjct: 311 DYYFRDEELSDEEAEFVQLSRK----LQEEDFELVERQYEGLKSGALAQGQLGPN-EHTV 365
Query: 370 YHFHSL 375
+ H L
Sbjct: 366 HRLHRL 371
>gi|452842513|gb|EME44449.1| hypothetical protein DOTSEDRAFT_53545 [Dothistroma septosporum
NZE10]
Length = 423
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 19/351 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WY LE +F R WQ++ + +L P D+ I FV+ D G+ +A
Sbjct: 37 PANWYQSEEMYQLERRSIFSRKWQLISHKCRLPKPGDWLKFEIANFSFVITHDRTGQFNA 96
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ GSG F C YHGW+YGL+G L KA ++ F+ ++ L+P+
Sbjct: 97 FHNVCRHRAFPVVTEGSGTSRIFSCKYHGWSYGLNGKLAKAPGYQELEGFDKEKNSLMPI 156
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ F+ +N+ + + + +++ + N D + E
Sbjct: 157 HLHVDRNGFMYVNLDAKETPEIAWEDDMIG---MDTQERYRDFNFADYEFDHFW--EMEG 211
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
+ NWK+ DNY + YH +H + + L SYS V R + T R
Sbjct: 212 DYNWKILADNY-NECYHCATSHPDIGAVANLQSYS------VDTARGQIVHNPATTQEQR 264
Query: 272 -LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK-AFIEQS 329
G + +PN N + +P +P++ + + F + + D++ + Q
Sbjct: 265 DAGLVVASTYYFPNVSTNITPHFFMIQRFVPSSPSKSSMQYQVFRNKNSTDEQFDLVNQI 324
Query: 330 LKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
K +V ED LC Q+ + + + +G P +E+ +F S + N+
Sbjct: 325 YK---RVMSEDKYLCNLAQKNINAGIFTNGELHPRLEKGPLYFQSNVRDNV 372
>gi|331653206|ref|ZP_08354211.1| putative dioxygenase subunit alpha YeaW [Escherichia coli M718]
gi|331049304|gb|EGI21376.1| putative dioxygenase subunit alpha YeaW [Escherichia coli M718]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYEIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|111025421|ref|YP_707841.1| ring hydroxylating dioxygenase [Rhodococcus jostii RHA1]
gi|384104956|ref|ZP_10005892.1| ring hydroxylating dioxygenase [Rhodococcus imtechensis RKJ300]
gi|110824400|gb|ABG99683.1| ring hydroxylating dioxygenase [Rhodococcus jostii RHA1]
gi|383836937|gb|EID76338.1| ring hydroxylating dioxygenase [Rhodococcus imtechensis RKJ300]
Length = 369
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 148/351 (42%), Gaps = 19/351 (5%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+++ T P+S+Y P ALE ++F RSWQ + + P D+ + G +V
Sbjct: 23 LDEGATLPASFYYAPEMYALEQEKIFARSWQYACHESAVAKPGDYAVTKAGSTPIIVTHG 82
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G++ F NVCRH +A +G K CPYHGWTYGLDG L A R +F
Sbjct: 83 KDGRLRGFVNVCRHRMHSIAEENGNKPLLQCPYHGWTYGLDGKLKTAPRSQREMNFECST 142
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L P+ V W ++ +N A V +++ +N + R
Sbjct: 143 ISLEPVSVERWDQWIFVNPDPAAPPLASVTADI--------RDRTDELNTDLREYEFQIR 194
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQLDSYSTSLYEKVSIQRCESGST 263
EY +ECNWKV+ +N ++ YH P HK G D Y E
Sbjct: 195 YEYDMECNWKVWAENAVE-CYHCPTLHKSSFGKTYHTNPDDYDVDSGENTIWHNGPIKWL 253
Query: 264 EGTDDTHRLGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
G D L +AF +P+ F ++ Y ++ + V P+AP +C D +
Sbjct: 254 PGNVDPAGLKGFR-FAFTFPSSFFALDDYVGFIGS--VQPIAPEKCWAFVDMYAKPGA-- 308
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
D +++ L+ +Q +ED + Q G S +GR E + F
Sbjct: 309 DPVVVKEWLEMWDQTLIEDKRATDIQQIGYRSGRVPTGRLMLDSESPLQAF 359
>gi|193066364|ref|ZP_03047413.1| Rieske 2Fe-2S domain protein [Escherichia coli E22]
gi|260844146|ref|YP_003221924.1| 2Fe-2S cluster-containing protein [Escherichia coli O103:H2 str.
12009]
gi|417172769|ref|ZP_12002802.1| Rieske [2Fe-2S] domain protein [Escherichia coli 3.2608]
gi|417187591|ref|ZP_12012257.1| Rieske [2Fe-2S] domain protein [Escherichia coli 93.0624]
gi|417252159|ref|ZP_12043922.1| Rieske [2Fe-2S] domain protein [Escherichia coli 4.0967]
gi|417623514|ref|ZP_12273820.1| rieske domain protein [Escherichia coli STEC_H.1.8]
gi|419289695|ref|ZP_13831790.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC11A]
gi|419295029|ref|ZP_13837075.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC11B]
gi|419300348|ref|ZP_13842349.1| rieske domain protein [Escherichia coli DEC11C]
gi|419306444|ref|ZP_13848348.1| rieske domain protein [Escherichia coli DEC11D]
gi|419311469|ref|ZP_13853336.1| rieske domain protein [Escherichia coli DEC11E]
gi|419869437|ref|ZP_14391641.1| 2Fe-2S cluster-containing protein [Escherichia coli O103:H2 str.
CVM9450]
gi|192926012|gb|EDV80657.1| Rieske 2Fe-2S domain protein [Escherichia coli E22]
gi|257759293|dbj|BAI30790.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli
O103:H2 str. 12009]
gi|345379616|gb|EGX11525.1| rieske domain protein [Escherichia coli STEC_H.1.8]
gi|378131626|gb|EHW92983.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC11A]
gi|378142116|gb|EHX03318.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC11B]
gi|378149879|gb|EHX10999.1| rieske domain protein [Escherichia coli DEC11D]
gi|378151727|gb|EHX12834.1| rieske domain protein [Escherichia coli DEC11C]
gi|378158570|gb|EHX19588.1| rieske domain protein [Escherichia coli DEC11E]
gi|386180467|gb|EIH57941.1| Rieske [2Fe-2S] domain protein [Escherichia coli 3.2608]
gi|386181248|gb|EIH64011.1| Rieske [2Fe-2S] domain protein [Escherichia coli 93.0624]
gi|386217734|gb|EII34219.1| Rieske [2Fe-2S] domain protein [Escherichia coli 4.0967]
gi|388342642|gb|EIL08676.1| 2Fe-2S cluster-containing protein [Escherichia coli O103:H2 str.
CVM9450]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|15802215|ref|NP_288238.1| hypothetical protein Z2845 [Escherichia coli O157:H7 str. EDL933]
gi|15831765|ref|NP_310538.1| hypothetical protein ECs2511 [Escherichia coli O157:H7 str. Sakai]
gi|16129756|ref|NP_416316.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli str.
K-12 substr. MG1655]
gi|74311886|ref|YP_310305.1| hypothetical protein SSON_1359 [Shigella sonnei Ss046]
gi|157154831|ref|YP_001463102.1| Rieske (2Fe-2S) domain-containing protein [Escherichia coli
E24377A]
gi|157161266|ref|YP_001458584.1| Rieske (2Fe-2S) domain-containing protein [Escherichia coli HS]
gi|168749368|ref|ZP_02774390.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4113]
gi|168758111|ref|ZP_02783118.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4401]
gi|168764253|ref|ZP_02789260.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4501]
gi|168770774|ref|ZP_02795781.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4486]
gi|168774883|ref|ZP_02799890.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4196]
gi|168782233|ref|ZP_02807240.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4076]
gi|168788214|ref|ZP_02813221.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC869]
gi|168801035|ref|ZP_02826042.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC508]
gi|170081458|ref|YP_001730778.1| 2Fe-2S cluster-containing protein [Escherichia coli str. K-12
substr. DH10B]
gi|188495667|ref|ZP_03002937.1| Rieske 2Fe-2S domain protein [Escherichia coli 53638]
gi|191168850|ref|ZP_03030624.1| Rieske 2Fe-2S domain protein [Escherichia coli B7A]
gi|193071294|ref|ZP_03052213.1| Rieske 2Fe-2S domain protein [Escherichia coli E110019]
gi|194439606|ref|ZP_03071678.1| Rieske 2Fe-2S domain protein [Escherichia coli 101-1]
gi|195937490|ref|ZP_03082872.1| 2Fe-2S cluster-containing protein [Escherichia coli O157:H7 str.
EC4024]
gi|208810708|ref|ZP_03252584.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208816715|ref|ZP_03257835.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208819829|ref|ZP_03260149.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4042]
gi|209397683|ref|YP_002270879.1| Rieske 2Fe-2S domain-containing protein [Escherichia coli O157:H7
str. EC4115]
gi|209919167|ref|YP_002293251.1| putative dioxygenase alpha subunit [Escherichia coli SE11]
gi|217328937|ref|ZP_03445018.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str.
TW14588]
gi|218695364|ref|YP_002403031.1| 2Fe-2S cluster-containing dioxygenase subunit [Escherichia coli
55989]
gi|238901016|ref|YP_002926812.1| putative 2Fe-2S cluster-containing protein [Escherichia coli
BW2952]
gi|251785250|ref|YP_002999554.1| 2Fe-2S cluster-containing protein [Escherichia coli BL21(DE3)]
gi|253773245|ref|YP_003036076.1| hypothetical protein ECBD_1840 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161861|ref|YP_003044969.1| putative 2Fe-2S cluster-containing protein [Escherichia coli B str.
REL606]
gi|254288649|ref|YP_003054397.1| 2Fe-2S cluster-containing protein [Escherichia coli BL21(DE3)]
gi|254793424|ref|YP_003078261.1| 2Fe-2S cluster-containing protein [Escherichia coli O157:H7 str.
TW14359]
gi|260868321|ref|YP_003234723.1| putative 2Fe-2S cluster-containing protein [Escherichia coli
O111:H- str. 11128]
gi|261227702|ref|ZP_05941983.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli
O157:H7 str. FRIK2000]
gi|261258133|ref|ZP_05950666.1| putative 2Fe-2S cluster-containing protein [Escherichia coli
O157:H7 str. FRIK966]
gi|291282982|ref|YP_003499800.1| dioxygenase subunit alpha yeaW [Escherichia coli O55:H7 str.
CB9615]
gi|293415117|ref|ZP_06657760.1| dioxygenase subunit alpha yeaW [Escherichia coli B185]
gi|293446174|ref|ZP_06662596.1| dioxygenase subunit alpha yeaW [Escherichia coli B088]
gi|297516495|ref|ZP_06934881.1| putative dioxygenase subunit alpha yeaW [Escherichia coli OP50]
gi|300823142|ref|ZP_07103275.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 119-7]
gi|300917628|ref|ZP_07134279.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 115-1]
gi|300924867|ref|ZP_07140801.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 182-1]
gi|300927879|ref|ZP_07143440.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 187-1]
gi|300938854|ref|ZP_07153560.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 21-1]
gi|300951407|ref|ZP_07165249.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 116-1]
gi|300956698|ref|ZP_07168972.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 175-1]
gi|301025369|ref|ZP_07188925.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 196-1]
gi|301026542|ref|ZP_07189970.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 69-1]
gi|301327559|ref|ZP_07220779.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 78-1]
gi|301645688|ref|ZP_07245615.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 146-1]
gi|307314120|ref|ZP_07593732.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli W]
gi|312969838|ref|ZP_07784021.1| rieske domain protein [Escherichia coli 1827-70]
gi|331642411|ref|ZP_08343546.1| putative dioxygenase subunit alpha YeaW [Escherichia coli H736]
gi|331668490|ref|ZP_08369338.1| putative dioxygenase subunit alpha YeaW [Escherichia coli TA271]
gi|331677678|ref|ZP_08378353.1| putative dioxygenase subunit alpha YeaW [Escherichia coli H591]
gi|332279047|ref|ZP_08391460.1| conserved hypothetical protein [Shigella sp. D9]
gi|378712759|ref|YP_005277652.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli KO11FL]
gi|383178025|ref|YP_005456030.1| Rieske (2Fe-2S) domain-containing protein [Shigella sonnei 53G]
gi|386280863|ref|ZP_10058527.1| putative dioxygenase subunit alpha yeaW [Escherichia sp. 4_1_40B]
gi|386595388|ref|YP_006091788.1| Rieske (2Fe-2S) domain-containing protein [Escherichia coli DH1]
gi|386609188|ref|YP_006124674.1| 2Fe-2S binding protein [Escherichia coli W]
gi|386614357|ref|YP_006134023.1| hypothetical protein UMNK88_2272 [Escherichia coli UMNK88]
gi|386701229|ref|YP_006165066.1| putative dioxygenase subunit alpha yeaW [Escherichia coli KO11FL]
gi|386704467|ref|YP_006168314.1| Putative dioxygenase subunit alpha yeaW [Escherichia coli P12b]
gi|386709661|ref|YP_006173382.1| putative dioxygenase subunit alpha yeaW [Escherichia coli W]
gi|387507047|ref|YP_006159303.1| dioxygenase subunit alpha yeaW [Escherichia coli O55:H7 str.
RM12579]
gi|387612288|ref|YP_006115404.1| putative oxidoreductase [Escherichia coli ETEC H10407]
gi|387621520|ref|YP_006129147.1| putative dioxygenase subunit alpha yeaW [Escherichia coli DH1]
gi|387882908|ref|YP_006313210.1| hypothetical protein CDCO157_2345 [Escherichia coli Xuzhou21]
gi|388477875|ref|YP_490063.1| 2Fe-2S cluster-containing protein [Escherichia coli str. K-12
substr. W3110]
gi|404375163|ref|ZP_10980351.1| putative dioxygenase subunit alpha yeaW [Escherichia sp. 1_1_43]
gi|407469602|ref|YP_006783955.1| dioxygenase subunit alpha yeaW [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407481734|ref|YP_006778883.1| dioxygenase subunit alpha yeaW [Escherichia coli O104:H4 str.
2011C-3493]
gi|410482283|ref|YP_006769829.1| dioxygenase subunit alpha yeaW [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414575648|ref|ZP_11432848.1| rieske domain protein [Shigella sonnei 3233-85]
gi|415809152|ref|ZP_11501953.1| rieske domain protein [Escherichia coli LT-68]
gi|415817957|ref|ZP_11507873.1| rieske domain protein [Escherichia coli OK1180]
gi|415825946|ref|ZP_11513302.1| rieske domain protein [Escherichia coli OK1357]
gi|415848925|ref|ZP_11526425.1| rieske domain protein [Shigella sonnei 53G]
gi|416281631|ref|ZP_11645939.1| dioxygenase alpha subunit [Shigella boydii ATCC 9905]
gi|416312310|ref|ZP_11657511.1| dioxygenase alpha subunit [Escherichia coli O157:H7 str. 1044]
gi|416323025|ref|ZP_11664634.1| dioxygenase alpha subunit [Escherichia coli O157:H7 str. EC1212]
gi|416327280|ref|ZP_11667287.1| dioxygenase alpha subunit [Escherichia coli O157:H7 str. 1125]
gi|416346823|ref|ZP_11679914.1| dioxygenase alpha subunit [Escherichia coli EC4100B]
gi|416773887|ref|ZP_11873881.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H7
str. G5101]
gi|416785889|ref|ZP_11878785.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H-
str. 493-89]
gi|416796867|ref|ZP_11883701.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H-
str. H 2687]
gi|416808312|ref|ZP_11888357.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O55:H7
str. 3256-97]
gi|416827566|ref|ZP_11897582.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O55:H7
str. USDA 5905]
gi|416828946|ref|ZP_11898240.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H7
str. LSU-61]
gi|417121477|ref|ZP_11970905.1| Rieske [2Fe-2S] domain protein [Escherichia coli 97.0246]
gi|417135425|ref|ZP_11980210.1| Rieske [2Fe-2S] domain protein [Escherichia coli 5.0588]
gi|417138196|ref|ZP_11981929.1| Rieske [2Fe-2S] domain protein [Escherichia coli 97.0259]
gi|417155219|ref|ZP_11993348.1| Rieske [2Fe-2S] domain protein [Escherichia coli 96.0497]
gi|417168161|ref|ZP_12000783.1| Rieske [2Fe-2S] domain protein [Escherichia coli 99.0741]
gi|417195531|ref|ZP_12015945.1| Rieske [2Fe-2S] domain protein [Escherichia coli 4.0522]
gi|417213152|ref|ZP_12022514.1| Rieske [2Fe-2S] domain protein [Escherichia coli JB1-95]
gi|417222322|ref|ZP_12025762.1| Rieske [2Fe-2S] domain protein [Escherichia coli 96.154]
gi|417231641|ref|ZP_12033039.1| Rieske [2Fe-2S] domain protein [Escherichia coli 5.0959]
gi|417262026|ref|ZP_12049514.1| Rieske [2Fe-2S] domain protein [Escherichia coli 2.3916]
gi|417265788|ref|ZP_12053157.1| Rieske [2Fe-2S] domain protein [Escherichia coli 3.3884]
gi|417272679|ref|ZP_12060028.1| Rieske [2Fe-2S] domain protein [Escherichia coli 2.4168]
gi|417276817|ref|ZP_12064143.1| Rieske [2Fe-2S] domain protein [Escherichia coli 3.2303]
gi|417291047|ref|ZP_12078328.1| Rieske [2Fe-2S] domain protein [Escherichia coli B41]
gi|417581278|ref|ZP_12232083.1| rieske domain protein [Escherichia coli STEC_B2F1]
gi|417591939|ref|ZP_12242638.1| rieske domain protein [Escherichia coli 2534-86]
gi|417596929|ref|ZP_12247577.1| rieske domain protein [Escherichia coli 3030-1]
gi|417602391|ref|ZP_12252961.1| rieske domain protein [Escherichia coli STEC_94C]
gi|417608368|ref|ZP_12258874.1| rieske domain protein [Escherichia coli STEC_DG131-3]
gi|417613221|ref|ZP_12263682.1| rieske domain protein [Escherichia coli STEC_EH250]
gi|417618360|ref|ZP_12268780.1| rieske domain protein [Escherichia coli G58-1]
gi|417628971|ref|ZP_12279211.1| rieske domain protein [Escherichia coli STEC_MHI813]
gi|417634716|ref|ZP_12284930.1| rieske domain protein [Escherichia coli STEC_S1191]
gi|417667189|ref|ZP_12316737.1| rieske domain protein [Escherichia coli STEC_O31]
gi|417689782|ref|ZP_12339010.1| rieske domain protein [Shigella boydii 5216-82]
gi|417805314|ref|ZP_12452270.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. LB226692]
gi|417833040|ref|ZP_12479488.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 01-09591]
gi|417865321|ref|ZP_12510365.1| hypothetical protein C22711_2253 [Escherichia coli O104:H4 str.
C227-11]
gi|417943475|ref|ZP_12586723.1| putative dioxygenase subunit alpha yeaW [Escherichia coli XH140A]
gi|417974897|ref|ZP_12615698.1| putative dioxygenase subunit alpha yeaW [Escherichia coli XH001]
gi|418264629|ref|ZP_12884944.1| 2Fe-2S cluster-containing protein [Shigella sonnei str. Moseley]
gi|418303069|ref|ZP_12914863.1| rieske [2Fe-2S] domain protein [Escherichia coli UMNF18]
gi|418941479|ref|ZP_13494806.1| dioxygenase subunit alpha yeaW [Escherichia coli O157:H43 str. T22]
gi|418957834|ref|ZP_13509757.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli J53]
gi|419045421|ref|ZP_13592367.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3A]
gi|419051336|ref|ZP_13598217.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3B]
gi|419057336|ref|ZP_13604151.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3C]
gi|419062715|ref|ZP_13609454.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3D]
gi|419069618|ref|ZP_13615254.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3E]
gi|419075590|ref|ZP_13621122.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3F]
gi|419080852|ref|ZP_13626309.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4A]
gi|419086486|ref|ZP_13631856.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4B]
gi|419092754|ref|ZP_13638047.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4C]
gi|419098346|ref|ZP_13643559.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4D]
gi|419104110|ref|ZP_13649251.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4E]
gi|419109662|ref|ZP_13654729.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4F]
gi|419114940|ref|ZP_13659962.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5A]
gi|419120616|ref|ZP_13665582.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5B]
gi|419126010|ref|ZP_13670899.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5C]
gi|419131734|ref|ZP_13676575.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5D]
gi|419136558|ref|ZP_13681359.1| rieske domain protein [Escherichia coli DEC5E]
gi|419142501|ref|ZP_13687248.1| rieske domain protein [Escherichia coli DEC6A]
gi|419148427|ref|ZP_13693100.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC6B]
gi|419159300|ref|ZP_13703809.1| rieske domain protein [Escherichia coli DEC6D]
gi|419164521|ref|ZP_13708978.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC6E]
gi|419175361|ref|ZP_13719206.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC7B]
gi|419197185|ref|ZP_13740578.1| rieske domain protein [Escherichia coli DEC8A]
gi|419203438|ref|ZP_13746637.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8B]
gi|419221546|ref|ZP_13764477.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8E]
gi|419226876|ref|ZP_13769741.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9A]
gi|419232527|ref|ZP_13775308.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9B]
gi|419237999|ref|ZP_13780724.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9C]
gi|419243437|ref|ZP_13786078.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9D]
gi|419284151|ref|ZP_13826335.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10F]
gi|419345416|ref|ZP_13886794.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13A]
gi|419349834|ref|ZP_13891178.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13B]
gi|419355232|ref|ZP_13896494.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13C]
gi|419360256|ref|ZP_13901477.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13D]
gi|419365433|ref|ZP_13906599.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13E]
gi|419370204|ref|ZP_13911325.1| rieske domain protein [Escherichia coli DEC14A]
gi|419391716|ref|ZP_13932531.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15A]
gi|419396785|ref|ZP_13937555.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15B]
gi|419402120|ref|ZP_13942845.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15C]
gi|419407263|ref|ZP_13947954.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15D]
gi|419412798|ref|ZP_13953454.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15E]
gi|419806840|ref|ZP_14331929.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli AI27]
gi|419808894|ref|ZP_14333780.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O32:H37 str. P4]
gi|419865551|ref|ZP_14387933.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O103:H25 str. CVM9340]
gi|419892279|ref|ZP_14412306.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9570]
gi|419897134|ref|ZP_14416727.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9574]
gi|419916476|ref|ZP_14434782.1| putative dioxygenase subunit alpha yeaW [Escherichia coli KD2]
gi|419930503|ref|ZP_14448102.1| putative dioxygenase subunit alpha yeaW [Escherichia coli 541-1]
gi|419941895|ref|ZP_14458548.1| putative dioxygenase subunit alpha yeaW [Escherichia coli 75]
gi|419950079|ref|ZP_14466303.1| putative dioxygenase subunit alpha yeaW [Escherichia coli CUMT8]
gi|420091398|ref|ZP_14603145.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9602]
gi|420093819|ref|ZP_14605454.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9634]
gi|420269501|ref|ZP_14771874.1| hypothetical protein ECPA22_2604 [Escherichia coli PA22]
gi|420275562|ref|ZP_14777863.1| hypothetical protein ECPA40_2803 [Escherichia coli PA40]
gi|420280478|ref|ZP_14782725.1| hypothetical protein ECTW06591_2263 [Escherichia coli TW06591]
gi|420286913|ref|ZP_14789110.1| hypothetical protein ECTW10246_2838 [Escherichia coli TW10246]
gi|420292543|ref|ZP_14794675.1| hypothetical protein ECTW11039_2667 [Escherichia coli TW11039]
gi|420298328|ref|ZP_14800391.1| hypothetical protein ECTW09109_2792 [Escherichia coli TW09109]
gi|420304422|ref|ZP_14806429.1| hypothetical protein ECTW10119_2898 [Escherichia coli TW10119]
gi|420309673|ref|ZP_14811617.1| hypothetical protein ECEC1738_2651 [Escherichia coli EC1738]
gi|420315459|ref|ZP_14817342.1| hypothetical protein ECEC1734_2525 [Escherichia coli EC1734]
gi|420358172|ref|ZP_14859165.1| rieske domain protein [Shigella sonnei 3226-85]
gi|420363146|ref|ZP_14864048.1| 2Fe-2S cluster-containing protein [Shigella sonnei 4822-66]
gi|421774161|ref|ZP_16210774.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli AD30]
gi|421812479|ref|ZP_16248226.1| hypothetical protein EC80416_2260 [Escherichia coli 8.0416]
gi|421818512|ref|ZP_16254024.1| rieske [2Fe-2S] domain protein [Escherichia coli 10.0821]
gi|421824133|ref|ZP_16259527.1| hypothetical protein ECFRIK920_2548 [Escherichia coli FRIK920]
gi|421831021|ref|ZP_16266319.1| hypothetical protein ECPA7_3164 [Escherichia coli PA7]
gi|422333078|ref|ZP_16414090.1| putative dioxygenase subunit alpha yeaW [Escherichia coli
4_1_47FAA]
gi|422353947|ref|ZP_16434694.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 117-3]
gi|422761048|ref|ZP_16814807.1| Rieske domain-containing protein [Escherichia coli E1167]
gi|422766368|ref|ZP_16820095.1| Rieske domain-containing protein [Escherichia coli E1520]
gi|422772323|ref|ZP_16826011.1| Rieske domain-containing protein [Escherichia coli E482]
gi|422786391|ref|ZP_16839130.1| Rieske domain-containing protein [Escherichia coli H489]
gi|422790952|ref|ZP_16843656.1| Rieske domain-containing protein [Escherichia coli TA007]
gi|422816917|ref|ZP_16865131.1| hypothetical protein ESMG_01443 [Escherichia coli M919]
gi|422956838|ref|ZP_16969312.1| hypothetical protein ESQG_00807 [Escherichia coli H494]
gi|422973416|ref|ZP_16975800.1| hypothetical protein ESRG_02434 [Escherichia coli TA124]
gi|422987853|ref|ZP_16978629.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. C227-11]
gi|422994734|ref|ZP_16985498.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. C236-11]
gi|422999874|ref|ZP_16990628.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 09-7901]
gi|423003485|ref|ZP_16994231.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 04-8351]
gi|423010050|ref|ZP_17000788.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-3677]
gi|423019277|ref|ZP_17009986.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4404]
gi|423024443|ref|ZP_17015140.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4522]
gi|423030260|ref|ZP_17020948.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4623]
gi|423038092|ref|ZP_17028766.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423043212|ref|ZP_17033879.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423044954|ref|ZP_17035615.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423053487|ref|ZP_17042295.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423060451|ref|ZP_17049247.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423704733|ref|ZP_17679156.1| hypothetical protein ESSG_04131 [Escherichia coli H730]
gi|423705785|ref|ZP_17680168.1| hypothetical protein ESTG_00261 [Escherichia coli B799]
gi|423711482|ref|ZP_17685791.1| hypothetical protein ECPA31_2481 [Escherichia coli PA31]
gi|424077637|ref|ZP_17814691.1| hypothetical protein ECFDA505_2612 [Escherichia coli FDA505]
gi|424084013|ref|ZP_17820574.1| hypothetical protein ECFDA517_2869 [Escherichia coli FDA517]
gi|424090434|ref|ZP_17826462.1| hypothetical protein ECFRIK1996_2653 [Escherichia coli FRIK1996]
gi|424096959|ref|ZP_17832379.1| hypothetical protein ECFRIK1985_2763 [Escherichia coli FRIK1985]
gi|424103297|ref|ZP_17838173.1| hypothetical protein ECFRIK1990_2766 [Escherichia coli FRIK1990]
gi|424110019|ref|ZP_17844338.1| hypothetical protein EC93001_2764 [Escherichia coli 93-001]
gi|424115726|ref|ZP_17849657.1| hypothetical protein ECPA3_2543 [Escherichia coli PA3]
gi|424122094|ref|ZP_17855507.1| hypothetical protein ECPA5_2602 [Escherichia coli PA5]
gi|424128222|ref|ZP_17861198.1| hypothetical protein ECPA9_2723 [Escherichia coli PA9]
gi|424134413|ref|ZP_17866959.1| hypothetical protein ECPA10_2755 [Escherichia coli PA10]
gi|424141050|ref|ZP_17873028.1| hypothetical protein ECPA14_2710 [Escherichia coli PA14]
gi|424147477|ref|ZP_17878938.1| hypothetical protein ECPA15_2837 [Escherichia coli PA15]
gi|424153411|ref|ZP_17884426.1| hypothetical protein ECPA24_2518 [Escherichia coli PA24]
gi|424235905|ref|ZP_17889878.1| hypothetical protein ECPA25_2382 [Escherichia coli PA25]
gi|424313492|ref|ZP_17895785.1| hypothetical protein ECPA28_2726 [Escherichia coli PA28]
gi|424449834|ref|ZP_17901608.1| hypothetical protein ECPA32_2661 [Escherichia coli PA32]
gi|424456002|ref|ZP_17907230.1| hypothetical protein ECPA33_2654 [Escherichia coli PA33]
gi|424462308|ref|ZP_17912881.1| hypothetical protein ECPA39_2643 [Escherichia coli PA39]
gi|424468707|ref|ZP_17918621.1| hypothetical protein ECPA41_2661 [Escherichia coli PA41]
gi|424475291|ref|ZP_17924700.1| hypothetical protein ECPA42_2806 [Escherichia coli PA42]
gi|424481033|ref|ZP_17930075.1| hypothetical protein ECTW07945_2598 [Escherichia coli TW07945]
gi|424487214|ref|ZP_17935841.1| hypothetical protein ECTW09098_2684 [Escherichia coli TW09098]
gi|424493612|ref|ZP_17941524.1| hypothetical protein ECTW09195_2705 [Escherichia coli TW09195]
gi|424500478|ref|ZP_17947478.1| hypothetical protein ECEC4203_2621 [Escherichia coli EC4203]
gi|424506632|ref|ZP_17953145.1| hypothetical protein ECEC4196_2588 [Escherichia coli EC4196]
gi|424514119|ref|ZP_17958898.1| hypothetical protein ECTW14313_2562 [Escherichia coli TW14313]
gi|424520408|ref|ZP_17964602.1| hypothetical protein ECTW14301_2506 [Escherichia coli TW14301]
gi|424526317|ref|ZP_17970101.1| hypothetical protein ECEC4421_2593 [Escherichia coli EC4421]
gi|424532481|ref|ZP_17975886.1| hypothetical protein ECEC4422_2725 [Escherichia coli EC4422]
gi|424538485|ref|ZP_17981502.1| hypothetical protein ECEC4013_2823 [Escherichia coli EC4013]
gi|424544452|ref|ZP_17986976.1| hypothetical protein ECEC4402_2607 [Escherichia coli EC4402]
gi|424550716|ref|ZP_17992663.1| hypothetical protein ECEC4439_2558 [Escherichia coli EC4439]
gi|424556964|ref|ZP_17998441.1| hypothetical protein ECEC4436_2542 [Escherichia coli EC4436]
gi|424563311|ref|ZP_18004369.1| hypothetical protein ECEC4437_2696 [Escherichia coli EC4437]
gi|424569382|ref|ZP_18010033.1| hypothetical protein ECEC4448_2585 [Escherichia coli EC4448]
gi|424575511|ref|ZP_18015684.1| hypothetical protein ECEC1845_2536 [Escherichia coli EC1845]
gi|424581368|ref|ZP_18021090.1| hypothetical protein ECEC1863_2268 [Escherichia coli EC1863]
gi|424770313|ref|ZP_18197518.1| hypothetical protein CFSAN001632_09542 [Escherichia coli O111:H8
str. CFSAN001632]
gi|425098216|ref|ZP_18501010.1| rieske domain protein [Escherichia coli 3.4870]
gi|425104396|ref|ZP_18506761.1| rieske domain protein [Escherichia coli 5.2239]
gi|425110225|ref|ZP_18512222.1| hypothetical protein EC60172_2812 [Escherichia coli 6.0172]
gi|425115183|ref|ZP_18516991.1| hypothetical protein EC80566_1839 [Escherichia coli 8.0566]
gi|425119902|ref|ZP_18521608.1| rieske [2Fe-2S] domain protein [Escherichia coli 8.0569]
gi|425126014|ref|ZP_18527278.1| rieske domain protein [Escherichia coli 8.0586]
gi|425131872|ref|ZP_18532775.1| rieske domain protein [Escherichia coli 8.2524]
gi|425138239|ref|ZP_18538708.1| hypothetical protein EC100833_2732 [Escherichia coli 10.0833]
gi|425144196|ref|ZP_18544257.1| rieske domain protein [Escherichia coli 10.0869]
gi|425150265|ref|ZP_18549946.1| rieske domain protein [Escherichia coli 88.0221]
gi|425156109|ref|ZP_18555436.1| hypothetical protein ECPA34_2703 [Escherichia coli PA34]
gi|425162621|ref|ZP_18561560.1| hypothetical protein ECFDA506_3062 [Escherichia coli FDA506]
gi|425168295|ref|ZP_18566841.1| hypothetical protein ECFDA507_2740 [Escherichia coli FDA507]
gi|425180327|ref|ZP_18578107.1| hypothetical protein ECFRIK1999_2801 [Escherichia coli FRIK1999]
gi|425186562|ref|ZP_18583921.1| hypothetical protein ECFRIK1997_2831 [Escherichia coli FRIK1997]
gi|425193430|ref|ZP_18590279.1| hypothetical protein ECNE1487_3063 [Escherichia coli NE1487]
gi|425199821|ref|ZP_18596139.1| hypothetical protein ECNE037_2998 [Escherichia coli NE037]
gi|425206270|ref|ZP_18602150.1| hypothetical protein ECFRIK2001_3065 [Escherichia coli FRIK2001]
gi|425212005|ref|ZP_18607491.1| hypothetical protein ECPA4_2786 [Escherichia coli PA4]
gi|425218134|ref|ZP_18613180.1| hypothetical protein ECPA23_2664 [Escherichia coli PA23]
gi|425224650|ref|ZP_18619213.1| hypothetical protein ECPA49_2770 [Escherichia coli PA49]
gi|425230884|ref|ZP_18625012.1| hypothetical protein ECPA45_2790 [Escherichia coli PA45]
gi|425237035|ref|ZP_18630794.1| hypothetical protein ECTT12B_2675 [Escherichia coli TT12B]
gi|425243096|ref|ZP_18636476.1| hypothetical protein ECMA6_2835 [Escherichia coli MA6]
gi|425249256|ref|ZP_18642252.1| hypothetical protein EC5905_2901 [Escherichia coli 5905]
gi|425255027|ref|ZP_18647620.1| hypothetical protein ECCB7326_2653 [Escherichia coli CB7326]
gi|425261321|ref|ZP_18653408.1| hypothetical protein ECEC96038_2583 [Escherichia coli EC96038]
gi|425267359|ref|ZP_18659043.1| hypothetical protein EC5412_2638 [Escherichia coli 5412]
gi|425272911|ref|ZP_18664344.1| hypothetical protein ECTW15901_2137 [Escherichia coli TW15901]
gi|425283393|ref|ZP_18674453.1| hypothetical protein ECTW00353_2003 [Escherichia coli TW00353]
gi|425294815|ref|ZP_18685099.1| hypothetical protein ECPA38_2562 [Escherichia coli PA38]
gi|425311501|ref|ZP_18700746.1| hypothetical protein ECEC1735_2655 [Escherichia coli EC1735]
gi|425317427|ref|ZP_18706280.1| hypothetical protein ECEC1736_2544 [Escherichia coli EC1736]
gi|425323532|ref|ZP_18711965.1| hypothetical protein ECEC1737_2554 [Escherichia coli EC1737]
gi|425329696|ref|ZP_18717663.1| hypothetical protein ECEC1846_2519 [Escherichia coli EC1846]
gi|425335861|ref|ZP_18723351.1| hypothetical protein ECEC1847_2530 [Escherichia coli EC1847]
gi|425342287|ref|ZP_18729267.1| hypothetical protein ECEC1848_2718 [Escherichia coli EC1848]
gi|425348099|ref|ZP_18734671.1| hypothetical protein ECEC1849_2472 [Escherichia coli EC1849]
gi|425354401|ref|ZP_18740546.1| hypothetical protein ECEC1850_2707 [Escherichia coli EC1850]
gi|425360372|ref|ZP_18746105.1| hypothetical protein ECEC1856_2539 [Escherichia coli EC1856]
gi|425366497|ref|ZP_18751784.1| hypothetical protein ECEC1862_2531 [Escherichia coli EC1862]
gi|425372919|ref|ZP_18757654.1| hypothetical protein ECEC1864_2708 [Escherichia coli EC1864]
gi|425385745|ref|ZP_18769393.1| hypothetical protein ECEC1866_2387 [Escherichia coli EC1866]
gi|425392433|ref|ZP_18775632.1| hypothetical protein ECEC1868_2720 [Escherichia coli EC1868]
gi|425398588|ref|ZP_18781377.1| hypothetical protein ECEC1869_2716 [Escherichia coli EC1869]
gi|425404621|ref|ZP_18786952.1| hypothetical protein ECEC1870_2462 [Escherichia coli EC1870]
gi|425411197|ref|ZP_18793040.1| hypothetical protein ECNE098_2819 [Escherichia coli NE098]
gi|425417503|ref|ZP_18798848.1| hypothetical protein ECFRIK523_2662 [Escherichia coli FRIK523]
gi|425428758|ref|ZP_18809452.1| hypothetical protein EC01304_2770 [Escherichia coli 0.1304]
gi|428947118|ref|ZP_19019505.1| rieske domain protein [Escherichia coli 88.1467]
gi|428953354|ref|ZP_19025203.1| rieske domain protein [Escherichia coli 88.1042]
gi|428959275|ref|ZP_19030655.1| rieske domain protein [Escherichia coli 89.0511]
gi|428965728|ref|ZP_19036585.1| rieske domain protein [Escherichia coli 90.0091]
gi|428971564|ref|ZP_19041983.1| rieske domain protein [Escherichia coli 90.0039]
gi|428978224|ref|ZP_19048113.1| rieske domain protein [Escherichia coli 90.2281]
gi|428983971|ref|ZP_19053426.1| rieske domain protein [Escherichia coli 93.0055]
gi|428990100|ref|ZP_19059147.1| rieske domain protein [Escherichia coli 93.0056]
gi|428995873|ref|ZP_19064554.1| rieske domain protein [Escherichia coli 94.0618]
gi|429001993|ref|ZP_19070235.1| rieske domain protein [Escherichia coli 95.0183]
gi|429008243|ref|ZP_19075847.1| rieske domain protein [Escherichia coli 95.1288]
gi|429014730|ref|ZP_19081699.1| rieske domain protein [Escherichia coli 95.0943]
gi|429026644|ref|ZP_19092739.1| rieske domain protein [Escherichia coli 96.0427]
gi|429032721|ref|ZP_19098327.1| rieske domain protein [Escherichia coli 96.0939]
gi|429038866|ref|ZP_19104056.1| rieske domain protein [Escherichia coli 96.0932]
gi|429044935|ref|ZP_19109702.1| rieske domain protein [Escherichia coli 96.0107]
gi|429050314|ref|ZP_19114917.1| rieske domain protein [Escherichia coli 97.0003]
gi|429061231|ref|ZP_19125298.1| rieske domain protein [Escherichia coli 97.0007]
gi|429067322|ref|ZP_19130868.1| rieske domain protein [Escherichia coli 99.0672]
gi|429073327|ref|ZP_19136618.1| hypothetical protein EC990678_2432 [Escherichia coli 99.0678]
gi|429078653|ref|ZP_19141817.1| rieske domain protein [Escherichia coli 99.0713]
gi|429719309|ref|ZP_19254248.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429724652|ref|ZP_19259519.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429776357|ref|ZP_19308339.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02030]
gi|429781132|ref|ZP_19313064.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783391|ref|ZP_19315307.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02092]
gi|429790763|ref|ZP_19322621.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02093]
gi|429796495|ref|ZP_19328314.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02281]
gi|429798188|ref|ZP_19329990.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02318]
gi|429806701|ref|ZP_19338429.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02913]
gi|429811049|ref|ZP_19342750.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-03439]
gi|429817121|ref|ZP_19348763.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-04080]
gi|429822332|ref|ZP_19353931.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-03943]
gi|429832845|ref|ZP_19363325.1| rieske domain protein [Escherichia coli 97.0010]
gi|429912849|ref|ZP_19378805.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429913721|ref|ZP_19379669.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429918763|ref|ZP_19384696.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429924570|ref|ZP_19390484.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429928508|ref|ZP_19394410.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429935060|ref|ZP_19400947.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429940731|ref|ZP_19406605.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429948364|ref|ZP_19414219.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429951009|ref|ZP_19416857.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429954305|ref|ZP_19420141.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432369925|ref|ZP_19613014.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE10]
gi|432376950|ref|ZP_19619947.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE12]
gi|432417026|ref|ZP_19659637.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE44]
gi|432449814|ref|ZP_19692086.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE193]
gi|432481141|ref|ZP_19723099.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE210]
gi|432485557|ref|ZP_19727473.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE212]
gi|432531177|ref|ZP_19768206.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE233]
gi|432534046|ref|ZP_19771024.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE234]
gi|432543313|ref|ZP_19780162.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE236]
gi|432548803|ref|ZP_19785577.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE237]
gi|432564000|ref|ZP_19800590.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE51]
gi|432580547|ref|ZP_19816973.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE56]
gi|432616765|ref|ZP_19852886.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE75]
gi|432622000|ref|ZP_19858034.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE76]
gi|432627387|ref|ZP_19863367.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE77]
gi|432637029|ref|ZP_19872905.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE81]
gi|432661035|ref|ZP_19896681.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE111]
gi|432670881|ref|ZP_19906412.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE119]
gi|432674838|ref|ZP_19910311.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE142]
gi|432680382|ref|ZP_19915759.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE143]
gi|432685588|ref|ZP_19920890.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE156]
gi|432691740|ref|ZP_19926971.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE161]
gi|432704557|ref|ZP_19939661.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE171]
gi|432737291|ref|ZP_19972057.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE42]
gi|432750252|ref|ZP_19984859.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE29]
gi|432765156|ref|ZP_19999595.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE48]
gi|432770766|ref|ZP_20005110.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE50]
gi|432809443|ref|ZP_20043336.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE101]
gi|432850785|ref|ZP_20081480.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE144]
gi|432861930|ref|ZP_20086690.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE146]
gi|432882039|ref|ZP_20098119.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE154]
gi|432955235|ref|ZP_20147175.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE197]
gi|432961820|ref|ZP_20151610.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE202]
gi|432967923|ref|ZP_20156838.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE203]
gi|433033539|ref|ZP_20221271.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE112]
gi|433048081|ref|ZP_20235450.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE120]
gi|433063194|ref|ZP_20250127.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE125]
gi|433173665|ref|ZP_20358199.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE232]
gi|442590294|ref|ZP_21009076.1| Rieske (2Fe-2S) domain protein [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|442598255|ref|ZP_21016028.1| Rieske (2Fe-2S) domain protein [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|444925013|ref|ZP_21244419.1| rieske domain protein [Escherichia coli 09BKT078844]
gi|444930864|ref|ZP_21249950.1| rieske domain protein [Escherichia coli 99.0814]
gi|444936155|ref|ZP_21254993.1| rieske domain protein [Escherichia coli 99.0815]
gi|444941790|ref|ZP_21260364.1| rieske domain protein [Escherichia coli 99.0816]
gi|444947367|ref|ZP_21265722.1| rieske domain protein [Escherichia coli 99.0839]
gi|444952982|ref|ZP_21271123.1| rieske domain protein [Escherichia coli 99.0848]
gi|444958487|ref|ZP_21276388.1| rieske domain protein [Escherichia coli 99.1753]
gi|444963686|ref|ZP_21281345.1| rieske domain protein [Escherichia coli 99.1775]
gi|444969537|ref|ZP_21286944.1| rieske domain protein [Escherichia coli 99.1793]
gi|444974877|ref|ZP_21292059.1| rieske domain protein [Escherichia coli 99.1805]
gi|444980371|ref|ZP_21297314.1| rieske domain protein [Escherichia coli ATCC 700728]
gi|444985693|ref|ZP_21302508.1| rieske domain protein [Escherichia coli PA11]
gi|444990979|ref|ZP_21307661.1| rieske domain protein [Escherichia coli PA19]
gi|444996180|ref|ZP_21312719.1| rieske domain protein [Escherichia coli PA13]
gi|445001814|ref|ZP_21318232.1| rieske domain protein [Escherichia coli PA2]
gi|445007276|ref|ZP_21323559.1| rieske domain protein [Escherichia coli PA47]
gi|445012393|ref|ZP_21328534.1| rieske domain protein [Escherichia coli PA48]
gi|445018131|ref|ZP_21334126.1| rieske domain protein [Escherichia coli PA8]
gi|445023783|ref|ZP_21339641.1| rieske domain protein [Escherichia coli 7.1982]
gi|445029022|ref|ZP_21344734.1| rieske domain protein [Escherichia coli 99.1781]
gi|445034466|ref|ZP_21350028.1| rieske domain protein [Escherichia coli 99.1762]
gi|445040182|ref|ZP_21355588.1| rieske domain protein [Escherichia coli PA35]
gi|445045303|ref|ZP_21360595.1| rieske domain protein [Escherichia coli 3.4880]
gi|445050899|ref|ZP_21365994.1| rieske domain protein [Escherichia coli 95.0083]
gi|445056710|ref|ZP_21371599.1| rieske domain protein [Escherichia coli 99.0670]
gi|450215292|ref|ZP_21895512.1| hypothetical protein C202_08646 [Escherichia coli O08]
gi|450244346|ref|ZP_21900309.1| hypothetical protein C201_08130 [Escherichia coli S17]
gi|452968448|ref|ZP_21966675.1| dioxygenase [Escherichia coli O157:H7 str. EC4009]
gi|81175122|sp|P0ABR8.1|YEAW_ECO57 RecName: Full=Putative dioxygenase subunit alpha YeaW
gi|81175123|sp|P0ABR7.1|YEAW_ECOLI RecName: Full=Putative dioxygenase subunit alpha YeaW
gi|12515842|gb|AAG56791.1|AE005403_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|1788103|gb|AAC74872.1| putative 2Fe-2S cluster-containing protein [Escherichia coli str.
K-12 substr. MG1655]
gi|13361978|dbj|BAB35934.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|73855363|gb|AAZ88070.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|85675129|dbj|BAA15597.2| predicted 2Fe-2S cluster-containing protein [Escherichia coli str.
K12 substr. W3110]
gi|157066946|gb|ABV06201.1| Rieske 2Fe-2S domain protein [Escherichia coli HS]
gi|157076861|gb|ABV16569.1| Rieske 2Fe-2S domain protein [Escherichia coli E24377A]
gi|169889293|gb|ACB03000.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli str.
K-12 substr. DH10B]
gi|187769372|gb|EDU33216.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4196]
gi|188016306|gb|EDU54428.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4113]
gi|188490866|gb|EDU65969.1| Rieske 2Fe-2S domain protein [Escherichia coli 53638]
gi|189000302|gb|EDU69288.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4076]
gi|189355020|gb|EDU73439.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4401]
gi|189360339|gb|EDU78758.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4486]
gi|189365719|gb|EDU84135.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4501]
gi|189371970|gb|EDU90386.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC869]
gi|189376727|gb|EDU95143.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC508]
gi|190901130|gb|EDV60905.1| Rieske 2Fe-2S domain protein [Escherichia coli B7A]
gi|192955389|gb|EDV85873.1| Rieske 2Fe-2S domain protein [Escherichia coli E110019]
gi|194421427|gb|EDX37442.1| Rieske 2Fe-2S domain protein [Escherichia coli 101-1]
gi|208725224|gb|EDZ74931.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208731058|gb|EDZ79747.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208739952|gb|EDZ87634.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4042]
gi|209159083|gb|ACI36516.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str. EC4115]
gi|209768058|gb|ACI82341.1| hypothetical protein ECs2511 [Escherichia coli]
gi|209768060|gb|ACI82342.1| hypothetical protein ECs2511 [Escherichia coli]
gi|209768062|gb|ACI82343.1| hypothetical protein ECs2511 [Escherichia coli]
gi|209768064|gb|ACI82344.1| hypothetical protein ECs2511 [Escherichia coli]
gi|209768066|gb|ACI82345.1| hypothetical protein ECs2511 [Escherichia coli]
gi|209912426|dbj|BAG77500.1| putative dioxygenase alpha subunit [Escherichia coli SE11]
gi|217318284|gb|EEC26711.1| Rieske 2Fe-2S domain protein [Escherichia coli O157:H7 str.
TW14588]
gi|218352096|emb|CAU97833.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli 55989]
gi|238862095|gb|ACR64093.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli
BW2952]
gi|242377523|emb|CAQ32277.1| 2Fe-2S cluster-containing protein [Escherichia coli BL21(DE3)]
gi|253324289|gb|ACT28891.1| conserved hypothetical protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973762|gb|ACT39433.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli B
str. REL606]
gi|253977956|gb|ACT43626.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli
BL21(DE3)]
gi|254592824|gb|ACT72185.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli
O157:H7 str. TW14359]
gi|257764677|dbj|BAI36172.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli
O111:H- str. 11128]
gi|260449077|gb|ACX39499.1| Rieske (2Fe-2S) domain protein [Escherichia coli DH1]
gi|290762855|gb|ADD56816.1| Putative dioxygenase subunit alpha yeaW [Escherichia coli O55:H7
str. CB9615]
gi|291323004|gb|EFE62432.1| dioxygenase subunit alpha yeaW [Escherichia coli B088]
gi|291432765|gb|EFF05744.1| dioxygenase subunit alpha yeaW [Escherichia coli B185]
gi|299880104|gb|EFI88315.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 196-1]
gi|300316498|gb|EFJ66282.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 175-1]
gi|300395473|gb|EFJ79011.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 69-1]
gi|300415145|gb|EFJ98455.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 115-1]
gi|300418973|gb|EFK02284.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 182-1]
gi|300449397|gb|EFK13017.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 116-1]
gi|300456213|gb|EFK19706.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 21-1]
gi|300464068|gb|EFK27561.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 187-1]
gi|300524296|gb|EFK45365.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 119-7]
gi|300845869|gb|EFK73629.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 78-1]
gi|301076060|gb|EFK90866.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 146-1]
gi|306906258|gb|EFN36775.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli W]
gi|309702024|emb|CBJ01338.1| putative oxidoreductase [Escherichia coli ETEC H10407]
gi|310338123|gb|EFQ03212.1| rieske domain protein [Escherichia coli 1827-70]
gi|315061105|gb|ADT75432.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli W]
gi|315136443|dbj|BAJ43602.1| putative dioxygenase subunit alpha yeaW [Escherichia coli DH1]
gi|320181161|gb|EFW56080.1| dioxygenase alpha subunit [Shigella boydii ATCC 9905]
gi|320188498|gb|EFW63160.1| dioxygenase alpha subunit [Escherichia coli O157:H7 str. EC1212]
gi|320197981|gb|EFW72589.1| dioxygenase alpha subunit [Escherichia coli EC4100B]
gi|320641653|gb|EFX11041.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H7
str. G5101]
gi|320647012|gb|EFX15845.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H-
str. 493-89]
gi|320652294|gb|EFX20592.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H-
str. H 2687]
gi|320657896|gb|EFX25658.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320658469|gb|EFX26163.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O55:H7
str. USDA 5905]
gi|320668367|gb|EFX35194.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O157:H7
str. LSU-61]
gi|323166516|gb|EFZ52279.1| rieske domain protein [Shigella sonnei 53G]
gi|323175121|gb|EFZ60735.1| rieske domain protein [Escherichia coli LT-68]
gi|323180581|gb|EFZ66126.1| rieske domain protein [Escherichia coli OK1180]
gi|323186451|gb|EFZ71799.1| rieske domain protein [Escherichia coli OK1357]
gi|323378320|gb|ADX50588.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli
KO11FL]
gi|323937060|gb|EGB33340.1| Rieske domain-containing protein [Escherichia coli E1520]
gi|323940532|gb|EGB36723.1| Rieske domain-containing protein [Escherichia coli E482]
gi|323961856|gb|EGB57455.1| Rieske domain-containing protein [Escherichia coli H489]
gi|323972691|gb|EGB67894.1| Rieske domain-containing protein [Escherichia coli TA007]
gi|324018059|gb|EGB87278.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 117-3]
gi|324118862|gb|EGC12751.1| Rieske domain-containing protein [Escherichia coli E1167]
gi|326342177|gb|EGD65958.1| dioxygenase alpha subunit [Escherichia coli O157:H7 str. 1044]
gi|326343727|gb|EGD67489.1| dioxygenase alpha subunit [Escherichia coli O157:H7 str. 1125]
gi|331039209|gb|EGI11429.1| putative dioxygenase subunit alpha YeaW [Escherichia coli H736]
gi|331063684|gb|EGI35595.1| putative dioxygenase subunit alpha YeaW [Escherichia coli TA271]
gi|331074138|gb|EGI45458.1| putative dioxygenase subunit alpha YeaW [Escherichia coli H591]
gi|332089920|gb|EGI95020.1| rieske domain protein [Shigella boydii 5216-82]
gi|332101399|gb|EGJ04745.1| conserved hypothetical protein [Shigella sp. D9]
gi|332343526|gb|AEE56860.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|339415167|gb|AEJ56839.1| rieske [2Fe-2S] domain protein [Escherichia coli UMNF18]
gi|340733922|gb|EGR63052.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 01-09591]
gi|340740217|gb|EGR74442.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. LB226692]
gi|341918610|gb|EGT68223.1| hypothetical protein C22711_2253 [Escherichia coli O104:H4 str.
C227-11]
gi|342364801|gb|EGU28900.1| putative dioxygenase subunit alpha yeaW [Escherichia coli XH140A]
gi|344195506|gb|EGV49575.1| putative dioxygenase subunit alpha yeaW [Escherichia coli XH001]
gi|345339901|gb|EGW72326.1| rieske domain protein [Escherichia coli STEC_B2F1]
gi|345340599|gb|EGW73017.1| rieske domain protein [Escherichia coli 2534-86]
gi|345350057|gb|EGW82332.1| rieske domain protein [Escherichia coli STEC_94C]
gi|345355241|gb|EGW87452.1| rieske domain protein [Escherichia coli 3030-1]
gi|345358958|gb|EGW91137.1| rieske domain protein [Escherichia coli STEC_DG131-3]
gi|345362732|gb|EGW94877.1| rieske domain protein [Escherichia coli STEC_EH250]
gi|345374185|gb|EGX06138.1| rieske domain protein [Escherichia coli STEC_MHI813]
gi|345376733|gb|EGX08666.1| rieske domain protein [Escherichia coli G58-1]
gi|345388207|gb|EGX18018.1| rieske domain protein [Escherichia coli STEC_S1191]
gi|354861569|gb|EHF22007.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. C236-11]
gi|354868922|gb|EHF29334.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. C227-11]
gi|354871018|gb|EHF31418.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 04-8351]
gi|354872845|gb|EHF33222.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 09-7901]
gi|354881418|gb|EHF41748.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-3677]
gi|354891136|gb|EHF51371.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4404]
gi|354893969|gb|EHF54166.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4522]
gi|354896116|gb|EHF56292.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354899091|gb|EHF59241.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4623]
gi|354900826|gb|EHF60958.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354913855|gb|EHF73843.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354917584|gb|EHF77547.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354919525|gb|EHF79468.1| putative dioxygenase subunit alpha yeaW [Escherichia coli O104:H4
str. 11-4632 C4]
gi|359332279|dbj|BAL38726.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli str.
K-12 substr. MDS42]
gi|371597169|gb|EHN85994.1| hypothetical protein ESRG_02434 [Escherichia coli TA124]
gi|371599139|gb|EHN87929.1| hypothetical protein ESQG_00807 [Escherichia coli H494]
gi|373245972|gb|EHP65435.1| putative dioxygenase subunit alpha yeaW [Escherichia coli
4_1_47FAA]
gi|374359041|gb|AEZ40748.1| dioxygenase subunit alpha yeaW [Escherichia coli O55:H7 str.
RM12579]
gi|375323225|gb|EHS68943.1| dioxygenase subunit alpha yeaW [Escherichia coli O157:H43 str. T22]
gi|377895018|gb|EHU59431.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3A]
gi|377895660|gb|EHU60071.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3B]
gi|377906617|gb|EHU70859.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3C]
gi|377911952|gb|EHU76117.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3D]
gi|377914676|gb|EHU78798.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3E]
gi|377923861|gb|EHU87822.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC3F]
gi|377928334|gb|EHU92245.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4A]
gi|377932906|gb|EHU96752.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4B]
gi|377944043|gb|EHV07752.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4C]
gi|377944662|gb|EHV08364.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4D]
gi|377949923|gb|EHV13554.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4E]
gi|377958869|gb|EHV22381.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC4F]
gi|377962145|gb|EHV25608.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5A]
gi|377968823|gb|EHV32214.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5B]
gi|377976065|gb|EHV39376.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5C]
gi|377977137|gb|EHV40438.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC5D]
gi|377985746|gb|EHV48958.1| rieske domain protein [Escherichia coli DEC5E]
gi|377994953|gb|EHV58074.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC6B]
gi|377996810|gb|EHV59918.1| rieske domain protein [Escherichia coli DEC6A]
gi|378009344|gb|EHV72300.1| rieske domain protein [Escherichia coli DEC6D]
gi|378010603|gb|EHV73548.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC6E]
gi|378034892|gb|EHV97456.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC7B]
gi|378048497|gb|EHW10851.1| rieske domain protein [Escherichia coli DEC8A]
gi|378051420|gb|EHW13737.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8B]
gi|378067441|gb|EHW29563.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8E]
gi|378075967|gb|EHW37980.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9A]
gi|378079020|gb|EHW40999.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9B]
gi|378084549|gb|EHW46451.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9C]
gi|378092045|gb|EHW53872.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9D]
gi|378134020|gb|EHW95350.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10F]
gi|378187334|gb|EHX47946.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13A]
gi|378201957|gb|EHX62397.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13C]
gi|378202195|gb|EHX62634.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13B]
gi|378205186|gb|EHX65601.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13D]
gi|378214097|gb|EHX74406.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC13E]
gi|378218591|gb|EHX78862.1| rieske domain protein [Escherichia coli DEC14A]
gi|378238440|gb|EHX98441.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15A]
gi|378245136|gb|EHY05074.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15B]
gi|378247979|gb|EHY07894.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15C]
gi|378255513|gb|EHY15371.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15D]
gi|378259663|gb|EHY19475.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC15E]
gi|383102635|gb|AFG40144.1| Putative dioxygenase subunit alpha yeaW [Escherichia coli P12b]
gi|383392756|gb|AFH17714.1| putative dioxygenase subunit alpha yeaW [Escherichia coli KO11FL]
gi|383405353|gb|AFH11596.1| putative dioxygenase subunit alpha yeaW [Escherichia coli W]
gi|384379443|gb|EIE37311.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli J53]
gi|384470152|gb|EIE54274.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli AI27]
gi|385157824|gb|EIF19814.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O32:H37 str. P4]
gi|385539588|gb|EIF86420.1| hypothetical protein ESMG_01443 [Escherichia coli M919]
gi|385705376|gb|EIG42441.1| hypothetical protein ESSG_04131 [Escherichia coli H730]
gi|385713177|gb|EIG50113.1| hypothetical protein ESTG_00261 [Escherichia coli B799]
gi|386122046|gb|EIG70659.1| putative dioxygenase subunit alpha yeaW [Escherichia sp. 4_1_40B]
gi|386148329|gb|EIG94766.1| Rieske [2Fe-2S] domain protein [Escherichia coli 97.0246]
gi|386153279|gb|EIH04568.1| Rieske [2Fe-2S] domain protein [Escherichia coli 5.0588]
gi|386158181|gb|EIH14518.1| Rieske [2Fe-2S] domain protein [Escherichia coli 97.0259]
gi|386168308|gb|EIH34824.1| Rieske [2Fe-2S] domain protein [Escherichia coli 96.0497]
gi|386171187|gb|EIH43235.1| Rieske [2Fe-2S] domain protein [Escherichia coli 99.0741]
gi|386189573|gb|EIH78339.1| Rieske [2Fe-2S] domain protein [Escherichia coli 4.0522]
gi|386194540|gb|EIH88791.1| Rieske [2Fe-2S] domain protein [Escherichia coli JB1-95]
gi|386202124|gb|EII01115.1| Rieske [2Fe-2S] domain protein [Escherichia coli 96.154]
gi|386204640|gb|EII09151.1| Rieske [2Fe-2S] domain protein [Escherichia coli 5.0959]
gi|386225153|gb|EII47488.1| Rieske [2Fe-2S] domain protein [Escherichia coli 2.3916]
gi|386231781|gb|EII59128.1| Rieske [2Fe-2S] domain protein [Escherichia coli 3.3884]
gi|386236379|gb|EII68355.1| Rieske [2Fe-2S] domain protein [Escherichia coli 2.4168]
gi|386240306|gb|EII77230.1| Rieske [2Fe-2S] domain protein [Escherichia coli 3.2303]
gi|386253369|gb|EIJ03059.1| Rieske [2Fe-2S] domain protein [Escherichia coli B41]
gi|386796366|gb|AFJ29400.1| hypothetical protein CDCO157_2345 [Escherichia coli Xuzhou21]
gi|388337317|gb|EIL03819.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O103:H25 str. CVM9340]
gi|388348058|gb|EIL13692.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9570]
gi|388355712|gb|EIL20534.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9574]
gi|388395819|gb|EIL56959.1| putative dioxygenase subunit alpha yeaW [Escherichia coli KD2]
gi|388399426|gb|EIL60224.1| putative dioxygenase subunit alpha yeaW [Escherichia coli 75]
gi|388399997|gb|EIL60767.1| putative dioxygenase subunit alpha yeaW [Escherichia coli 541-1]
gi|388417725|gb|EIL77557.1| putative dioxygenase subunit alpha yeaW [Escherichia coli CUMT8]
gi|390645040|gb|EIN24224.1| hypothetical protein ECFDA517_2869 [Escherichia coli FDA517]
gi|390645265|gb|EIN24448.1| hypothetical protein ECFRIK1996_2653 [Escherichia coli FRIK1996]
gi|390645914|gb|EIN25052.1| hypothetical protein ECFDA505_2612 [Escherichia coli FDA505]
gi|390663503|gb|EIN40999.1| hypothetical protein EC93001_2764 [Escherichia coli 93-001]
gi|390664918|gb|EIN42246.1| hypothetical protein ECFRIK1985_2763 [Escherichia coli FRIK1985]
gi|390665935|gb|EIN43141.1| hypothetical protein ECFRIK1990_2766 [Escherichia coli FRIK1990]
gi|390681495|gb|EIN57288.1| hypothetical protein ECPA3_2543 [Escherichia coli PA3]
gi|390684537|gb|EIN60148.1| hypothetical protein ECPA5_2602 [Escherichia coli PA5]
gi|390685519|gb|EIN60989.1| hypothetical protein ECPA9_2723 [Escherichia coli PA9]
gi|390701368|gb|EIN75592.1| hypothetical protein ECPA10_2755 [Escherichia coli PA10]
gi|390703040|gb|EIN77091.1| hypothetical protein ECPA15_2837 [Escherichia coli PA15]
gi|390703715|gb|EIN77710.1| hypothetical protein ECPA14_2710 [Escherichia coli PA14]
gi|390715703|gb|EIN88539.1| hypothetical protein ECPA22_2604 [Escherichia coli PA22]
gi|390726900|gb|EIN99328.1| hypothetical protein ECPA25_2382 [Escherichia coli PA25]
gi|390727298|gb|EIN99715.1| hypothetical protein ECPA24_2518 [Escherichia coli PA24]
gi|390729650|gb|EIO01810.1| hypothetical protein ECPA28_2726 [Escherichia coli PA28]
gi|390745170|gb|EIO15990.1| hypothetical protein ECPA32_2661 [Escherichia coli PA32]
gi|390745937|gb|EIO16712.1| hypothetical protein ECPA31_2481 [Escherichia coli PA31]
gi|390747461|gb|EIO18014.1| hypothetical protein ECPA33_2654 [Escherichia coli PA33]
gi|390759343|gb|EIO28741.1| hypothetical protein ECPA40_2803 [Escherichia coli PA40]
gi|390769825|gb|EIO38721.1| hypothetical protein ECPA41_2661 [Escherichia coli PA41]
gi|390771508|gb|EIO40182.1| hypothetical protein ECPA39_2643 [Escherichia coli PA39]
gi|390771687|gb|EIO40342.1| hypothetical protein ECPA42_2806 [Escherichia coli PA42]
gi|390782419|gb|EIO50053.1| hypothetical protein ECTW06591_2263 [Escherichia coli TW06591]
gi|390791093|gb|EIO58488.1| hypothetical protein ECTW10246_2838 [Escherichia coli TW10246]
gi|390796761|gb|EIO64027.1| hypothetical protein ECTW07945_2598 [Escherichia coli TW07945]
gi|390798342|gb|EIO65538.1| hypothetical protein ECTW11039_2667 [Escherichia coli TW11039]
gi|390808518|gb|EIO75357.1| hypothetical protein ECTW09109_2792 [Escherichia coli TW09109]
gi|390809842|gb|EIO76624.1| hypothetical protein ECTW09098_2684 [Escherichia coli TW09098]
gi|390817108|gb|EIO83568.1| hypothetical protein ECTW10119_2898 [Escherichia coli TW10119]
gi|390829196|gb|EIO94804.1| hypothetical protein ECEC4203_2621 [Escherichia coli EC4203]
gi|390832560|gb|EIO97799.1| hypothetical protein ECTW09195_2705 [Escherichia coli TW09195]
gi|390833855|gb|EIO98831.1| hypothetical protein ECEC4196_2588 [Escherichia coli EC4196]
gi|390848903|gb|EIP12351.1| hypothetical protein ECTW14301_2506 [Escherichia coli TW14301]
gi|390850710|gb|EIP14067.1| hypothetical protein ECTW14313_2562 [Escherichia coli TW14313]
gi|390852202|gb|EIP15371.1| hypothetical protein ECEC4421_2593 [Escherichia coli EC4421]
gi|390863570|gb|EIP25702.1| hypothetical protein ECEC4422_2725 [Escherichia coli EC4422]
gi|390867932|gb|EIP29698.1| hypothetical protein ECEC4013_2823 [Escherichia coli EC4013]
gi|390873655|gb|EIP34836.1| hypothetical protein ECEC4402_2607 [Escherichia coli EC4402]
gi|390880559|gb|EIP41235.1| hypothetical protein ECEC4439_2558 [Escherichia coli EC4439]
gi|390885114|gb|EIP45363.1| hypothetical protein ECEC4436_2542 [Escherichia coli EC4436]
gi|390896565|gb|EIP55951.1| hypothetical protein ECEC4437_2696 [Escherichia coli EC4437]
gi|390900485|gb|EIP59704.1| hypothetical protein ECEC4448_2585 [Escherichia coli EC4448]
gi|390901120|gb|EIP60304.1| hypothetical protein ECEC1738_2651 [Escherichia coli EC1738]
gi|390909160|gb|EIP67961.1| hypothetical protein ECEC1734_2525 [Escherichia coli EC1734]
gi|390921179|gb|EIP79402.1| hypothetical protein ECEC1863_2268 [Escherichia coli EC1863]
gi|390922071|gb|EIP80179.1| hypothetical protein ECEC1845_2536 [Escherichia coli EC1845]
gi|391285306|gb|EIQ43886.1| rieske domain protein [Shigella sonnei 3226-85]
gi|391286879|gb|EIQ45413.1| rieske domain protein [Shigella sonnei 3233-85]
gi|391295263|gb|EIQ53432.1| 2Fe-2S cluster-containing protein [Shigella sonnei 4822-66]
gi|394382983|gb|EJE60591.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9602]
gi|394398332|gb|EJE74519.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Escherichia
coli O111:H8 str. CVM9634]
gi|397785436|gb|EJK96286.1| rieske domain protein [Escherichia coli STEC_O31]
gi|397901781|gb|EJL18121.1| 2Fe-2S cluster-containing protein [Shigella sonnei str. Moseley]
gi|404291224|gb|EJZ48114.1| putative dioxygenase subunit alpha yeaW [Escherichia sp. 1_1_43]
gi|406777445|gb|AFS56869.1| dioxygenase subunit alpha yeaW [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407054031|gb|AFS74082.1| dioxygenase subunit alpha yeaW [Escherichia coli O104:H4 str.
2011C-3493]
gi|407065637|gb|AFS86684.1| dioxygenase subunit alpha yeaW [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408067063|gb|EKH01506.1| hypothetical protein ECPA7_3164 [Escherichia coli PA7]
gi|408070843|gb|EKH05199.1| hypothetical protein ECFRIK920_2548 [Escherichia coli FRIK920]
gi|408076172|gb|EKH10400.1| hypothetical protein ECPA34_2703 [Escherichia coli PA34]
gi|408081946|gb|EKH15938.1| hypothetical protein ECFDA506_3062 [Escherichia coli FDA506]
gi|408084417|gb|EKH18189.1| hypothetical protein ECFDA507_2740 [Escherichia coli FDA507]
gi|408099054|gb|EKH31708.1| hypothetical protein ECFRIK1999_2801 [Escherichia coli FRIK1999]
gi|408106867|gb|EKH38958.1| hypothetical protein ECFRIK1997_2831 [Escherichia coli FRIK1997]
gi|408110606|gb|EKH42393.1| hypothetical protein ECNE1487_3063 [Escherichia coli NE1487]
gi|408118003|gb|EKH49177.1| hypothetical protein ECNE037_2998 [Escherichia coli NE037]
gi|408123538|gb|EKH54277.1| hypothetical protein ECFRIK2001_3065 [Escherichia coli FRIK2001]
gi|408129657|gb|EKH59876.1| hypothetical protein ECPA4_2786 [Escherichia coli PA4]
gi|408140979|gb|EKH70459.1| hypothetical protein ECPA23_2664 [Escherichia coli PA23]
gi|408142766|gb|EKH72115.1| hypothetical protein ECPA49_2770 [Escherichia coli PA49]
gi|408147787|gb|EKH76696.1| hypothetical protein ECPA45_2790 [Escherichia coli PA45]
gi|408156133|gb|EKH84340.1| hypothetical protein ECTT12B_2675 [Escherichia coli TT12B]
gi|408163255|gb|EKH91122.1| hypothetical protein ECMA6_2835 [Escherichia coli MA6]
gi|408165677|gb|EKH93354.1| hypothetical protein EC5905_2901 [Escherichia coli 5905]
gi|408176805|gb|EKI03638.1| hypothetical protein ECCB7326_2653 [Escherichia coli CB7326]
gi|408183551|gb|EKI09976.1| hypothetical protein ECEC96038_2583 [Escherichia coli EC96038]
gi|408184380|gb|EKI10703.1| hypothetical protein EC5412_2638 [Escherichia coli 5412]
gi|408194170|gb|EKI19658.1| hypothetical protein ECTW15901_2137 [Escherichia coli TW15901]
gi|408202681|gb|EKI27743.1| hypothetical protein ECTW00353_2003 [Escherichia coli TW00353]
gi|408220334|gb|EKI44390.1| hypothetical protein ECPA38_2562 [Escherichia coli PA38]
gi|408229701|gb|EKI53128.1| hypothetical protein ECEC1735_2655 [Escherichia coli EC1735]
gi|408241021|gb|EKI63671.1| hypothetical protein ECEC1736_2544 [Escherichia coli EC1736]
gi|408245108|gb|EKI67501.1| hypothetical protein ECEC1737_2554 [Escherichia coli EC1737]
gi|408249488|gb|EKI71418.1| hypothetical protein ECEC1846_2519 [Escherichia coli EC1846]
gi|408259972|gb|EKI81107.1| hypothetical protein ECEC1847_2530 [Escherichia coli EC1847]
gi|408261955|gb|EKI82908.1| hypothetical protein ECEC1848_2718 [Escherichia coli EC1848]
gi|408267606|gb|EKI88053.1| hypothetical protein ECEC1849_2472 [Escherichia coli EC1849]
gi|408277638|gb|EKI97425.1| hypothetical protein ECEC1850_2707 [Escherichia coli EC1850]
gi|408279846|gb|EKI99429.1| hypothetical protein ECEC1856_2539 [Escherichia coli EC1856]
gi|408291618|gb|EKJ10211.1| hypothetical protein ECEC1862_2531 [Escherichia coli EC1862]
gi|408293835|gb|EKJ12256.1| hypothetical protein ECEC1864_2708 [Escherichia coli EC1864]
gi|408310755|gb|EKJ27796.1| hypothetical protein ECEC1868_2720 [Escherichia coli EC1868]
gi|408311310|gb|EKJ28320.1| hypothetical protein ECEC1866_2387 [Escherichia coli EC1866]
gi|408323548|gb|EKJ39510.1| hypothetical protein ECEC1869_2716 [Escherichia coli EC1869]
gi|408328120|gb|EKJ43737.1| hypothetical protein ECNE098_2819 [Escherichia coli NE098]
gi|408328928|gb|EKJ44467.1| hypothetical protein ECEC1870_2462 [Escherichia coli EC1870]
gi|408339121|gb|EKJ53741.1| hypothetical protein ECFRIK523_2662 [Escherichia coli FRIK523]
gi|408348701|gb|EKJ62782.1| hypothetical protein EC01304_2770 [Escherichia coli 0.1304]
gi|408460791|gb|EKJ84569.1| Rieske (2Fe-2S) iron-sulfur domain protein [Escherichia coli AD30]
gi|408551713|gb|EKK28951.1| rieske domain protein [Escherichia coli 5.2239]
gi|408552519|gb|EKK29691.1| rieske domain protein [Escherichia coli 3.4870]
gi|408553088|gb|EKK30219.1| hypothetical protein EC60172_2812 [Escherichia coli 6.0172]
gi|408569601|gb|EKK45588.1| hypothetical protein EC80566_1839 [Escherichia coli 8.0566]
gi|408570843|gb|EKK46799.1| rieske [2Fe-2S] domain protein [Escherichia coli 8.0569]
gi|408574293|gb|EKK50070.1| rieske domain protein [Escherichia coli 8.0586]
gi|408582411|gb|EKK57626.1| hypothetical protein EC100833_2732 [Escherichia coli 10.0833]
gi|408583078|gb|EKK58256.1| rieske domain protein [Escherichia coli 8.2524]
gi|408594657|gb|EKK68938.1| rieske domain protein [Escherichia coli 10.0869]
gi|408598223|gb|EKK72182.1| rieske domain protein [Escherichia coli 88.0221]
gi|408602259|gb|EKK75980.1| hypothetical protein EC80416_2260 [Escherichia coli 8.0416]
gi|408613612|gb|EKK86899.1| rieske [2Fe-2S] domain protein [Escherichia coli 10.0821]
gi|421942511|gb|EKT99838.1| hypothetical protein CFSAN001632_09542 [Escherichia coli O111:H8
str. CFSAN001632]
gi|427207650|gb|EKV77818.1| rieske domain protein [Escherichia coli 88.1042]
gi|427209311|gb|EKV79350.1| rieske domain protein [Escherichia coli 89.0511]
gi|427210585|gb|EKV80440.1| rieske domain protein [Escherichia coli 88.1467]
gi|427226406|gb|EKV94996.1| rieske domain protein [Escherichia coli 90.2281]
gi|427226617|gb|EKV95206.1| rieske domain protein [Escherichia coli 90.0091]
gi|427229531|gb|EKV97845.1| rieske domain protein [Escherichia coli 90.0039]
gi|427244781|gb|EKW12090.1| rieske domain protein [Escherichia coli 93.0056]
gi|427245435|gb|EKW12719.1| rieske domain protein [Escherichia coli 93.0055]
gi|427247638|gb|EKW14690.1| rieske domain protein [Escherichia coli 94.0618]
gi|427263458|gb|EKW29216.1| rieske domain protein [Escherichia coli 95.0943]
gi|427264474|gb|EKW30155.1| rieske domain protein [Escherichia coli 95.0183]
gi|427266442|gb|EKW31883.1| rieske domain protein [Escherichia coli 95.1288]
gi|427282503|gb|EKW46748.1| rieske domain protein [Escherichia coli 96.0427]
gi|427285083|gb|EKW49086.1| rieske domain protein [Escherichia coli 96.0939]
gi|427294320|gb|EKW57505.1| rieske domain protein [Escherichia coli 96.0932]
gi|427301514|gb|EKW64376.1| rieske domain protein [Escherichia coli 96.0107]
gi|427302219|gb|EKW65055.1| rieske domain protein [Escherichia coli 97.0003]
gi|427317774|gb|EKW79665.1| rieske domain protein [Escherichia coli 97.0007]
gi|427322380|gb|EKW84013.1| rieske domain protein [Escherichia coli 99.0672]
gi|427330113|gb|EKW91391.1| hypothetical protein EC990678_2432 [Escherichia coli 99.0678]
gi|427330510|gb|EKW91780.1| rieske domain protein [Escherichia coli 99.0713]
gi|429256961|gb|EKY41064.1| rieske domain protein [Escherichia coli 97.0010]
gi|429346236|gb|EKY83016.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02030]
gi|429348077|gb|EKY84848.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354778|gb|EKY91474.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02092]
gi|429362978|gb|EKY99622.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02093]
gi|429364877|gb|EKZ01495.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02281]
gi|429366601|gb|EKZ03203.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02318]
gi|429377065|gb|EKZ13590.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-02913]
gi|429381576|gb|EKZ18061.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-03943]
gi|429384602|gb|EKZ21059.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-03439]
gi|429393275|gb|EKZ29671.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
11-04080]
gi|429393966|gb|EKZ30352.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429407485|gb|EKZ43738.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429408342|gb|EKZ44580.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429409788|gb|EKZ46014.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429426476|gb|EKZ62565.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429426882|gb|EKZ62969.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429431446|gb|EKZ67495.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429433847|gb|EKZ69877.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429440808|gb|EKZ76785.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429444386|gb|EKZ80332.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429450015|gb|EKZ85913.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429453876|gb|EKZ89744.1| 2Fe-2S cluster-containing protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430885552|gb|ELC08423.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE10]
gi|430899242|gb|ELC21347.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE12]
gi|430940388|gb|ELC60571.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE44]
gi|430981390|gb|ELC98118.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE193]
gi|431007798|gb|ELD22609.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE210]
gi|431015954|gb|ELD29501.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE212]
gi|431054405|gb|ELD63975.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE233]
gi|431061196|gb|ELD70515.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE234]
gi|431074912|gb|ELD82449.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE236]
gi|431080623|gb|ELD87418.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE237]
gi|431094592|gb|ELE00223.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE51]
gi|431105378|gb|ELE09713.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE56]
gi|431155005|gb|ELE55766.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE75]
gi|431159699|gb|ELE60243.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE76]
gi|431164080|gb|ELE64481.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE77]
gi|431172018|gb|ELE72169.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE81]
gi|431200151|gb|ELE98877.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE111]
gi|431210955|gb|ELF08938.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE119]
gi|431215339|gb|ELF13035.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE142]
gi|431221312|gb|ELF18633.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE143]
gi|431222623|gb|ELF19899.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE156]
gi|431227215|gb|ELF24352.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE161]
gi|431243863|gb|ELF38191.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE171]
gi|431284391|gb|ELF75249.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE42]
gi|431297169|gb|ELF86827.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE29]
gi|431310917|gb|ELF99097.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE48]
gi|431315966|gb|ELG03865.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE50]
gi|431362211|gb|ELG48789.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE101]
gi|431400107|gb|ELG83489.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE144]
gi|431405677|gb|ELG88910.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE146]
gi|431411545|gb|ELG94656.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE154]
gi|431467906|gb|ELH47912.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE197]
gi|431471040|gb|ELH50933.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE203]
gi|431474776|gb|ELH54582.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE202]
gi|431553529|gb|ELI27455.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE112]
gi|431566187|gb|ELI39226.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE120]
gi|431583028|gb|ELI55038.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE125]
gi|431693555|gb|ELJ58967.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE232]
gi|441609575|emb|CCP94989.1| Rieske (2Fe-2S) domain protein [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|441653268|emb|CCQ01731.1| Rieske (2Fe-2S) domain protein [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|444539958|gb|ELV19665.1| rieske domain protein [Escherichia coli 99.0814]
gi|444542761|gb|ELV22097.1| rieske domain protein [Escherichia coli 09BKT078844]
gi|444548746|gb|ELV27102.1| rieske domain protein [Escherichia coli 99.0815]
gi|444559759|gb|ELV36960.1| rieske domain protein [Escherichia coli 99.0839]
gi|444561751|gb|ELV38854.1| rieske domain protein [Escherichia coli 99.0816]
gi|444565849|gb|ELV42692.1| rieske domain protein [Escherichia coli 99.0848]
gi|444575549|gb|ELV51785.1| rieske domain protein [Escherichia coli 99.1753]
gi|444579517|gb|ELV55503.1| rieske domain protein [Escherichia coli 99.1775]
gi|444581677|gb|ELV57515.1| rieske domain protein [Escherichia coli 99.1793]
gi|444595273|gb|ELV70377.1| rieske domain protein [Escherichia coli PA11]
gi|444595453|gb|ELV70555.1| rieske domain protein [Escherichia coli ATCC 700728]
gi|444598181|gb|ELV73117.1| rieske domain protein [Escherichia coli 99.1805]
gi|444609100|gb|ELV83559.1| rieske domain protein [Escherichia coli PA19]
gi|444609471|gb|ELV83929.1| rieske domain protein [Escherichia coli PA13]
gi|444617373|gb|ELV91489.1| rieske domain protein [Escherichia coli PA2]
gi|444626281|gb|ELW00077.1| rieske domain protein [Escherichia coli PA47]
gi|444626664|gb|ELW00456.1| rieske domain protein [Escherichia coli PA48]
gi|444631843|gb|ELW05426.1| rieske domain protein [Escherichia coli PA8]
gi|444641135|gb|ELW14374.1| rieske domain protein [Escherichia coli 7.1982]
gi|444644068|gb|ELW17192.1| rieske domain protein [Escherichia coli 99.1781]
gi|444647342|gb|ELW20316.1| rieske domain protein [Escherichia coli 99.1762]
gi|444655953|gb|ELW28489.1| rieske domain protein [Escherichia coli PA35]
gi|444662769|gb|ELW35021.1| rieske domain protein [Escherichia coli 3.4880]
gi|444667773|gb|ELW39804.1| rieske domain protein [Escherichia coli 95.0083]
gi|444670963|gb|ELW42802.1| rieske domain protein [Escherichia coli 99.0670]
gi|449318941|gb|EMD08998.1| hypothetical protein C202_08646 [Escherichia coli O08]
gi|449321699|gb|EMD11710.1| hypothetical protein C201_08130 [Escherichia coli S17]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|425422498|ref|ZP_18803678.1| hypothetical protein EC01288_1854 [Escherichia coli 0.1288]
gi|408344736|gb|EKJ59085.1| hypothetical protein EC01288_1854 [Escherichia coli 0.1288]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LELAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|425305343|ref|ZP_18695086.1| hypothetical protein ECN1_1769 [Escherichia coli N1]
gi|408229536|gb|EKI52965.1| hypothetical protein ECN1_1769 [Escherichia coli N1]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNTFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSVISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|92114573|ref|YP_574501.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91797663|gb|ABE59802.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 388
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 166/380 (43%), Gaps = 49/380 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P EKALT PS ++ DP A E R+F +W + +++ +P F I + +V R
Sbjct: 13 PAEKALTLPSRYFYDPQLFAAERDRIFMGAWHFACHVNEVTEPGAFVVRDIFDQSVIVMR 72
Query: 86 DDNGKIHAFHNVCRHHASIL--ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
D G++HAFHNVC+H + L T +K C YH W YGLDG+L A R I FN
Sbjct: 73 DRQGELHAFHNVCQHRGNRLLDETRGVQKGVIRCAYHSWCYGLDGSLRAAPRSDRIAAFN 132
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
V ++ + P+ + + V N+ +A + + + G + I ++
Sbjct: 133 VDDYHIPPVRLEVFAGCVYFNLDPDATDMQTL--------FPGAEAAIREAIPDLDAMQL 184
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYA---HKGLASGLQLDSYSTSLYEK-------- 252
+ + + NWKV DN ++ GYH + H LA+ + D Y + ++
Sbjct: 185 IQEDDVIVPANWKVIMDNSIE-GYHFQLSGPHHVDLAALIDFDGYRLTHHDNWWTYGAPP 243
Query: 253 ---------VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
V ++R +G+ +G + Y F + M T ++IPL
Sbjct: 244 NADAKQAYGVPLER-PAGNGDGFFNIGIWPHNTFYQFPFSQC--------MGTFMIIPLD 294
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLK-DSEQVQMEDIILCEGVQRGLESPAYCSGRY- 361
R + F Y+ + S++ +E++ EDI L VQ+GL S Y GRY
Sbjct: 295 AERSILRFGYYTPHDTLPE--VTRASMRWMNEELGPEDIELNISVQKGLHSLGYDQGRYM 352
Query: 362 -----APSVEQTMYHFHSLL 376
+ E + HFH L+
Sbjct: 353 IDAARSNESEHLVLHFHRLV 372
>gi|218554374|ref|YP_002387287.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli IAI1]
gi|417149932|ref|ZP_11989850.1| Rieske [2Fe-2S] domain protein [Escherichia coli 1.2264]
gi|417246240|ref|ZP_12039580.1| Rieske [2Fe-2S] domain protein [Escherichia coli 9.0111]
gi|422774298|ref|ZP_16827954.1| Rieske domain-containing protein [Escherichia coli H120]
gi|432831781|ref|ZP_20065355.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE135]
gi|218361142|emb|CAQ98725.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli IAI1]
gi|323948313|gb|EGB44301.1| Rieske domain-containing protein [Escherichia coli H120]
gi|386160944|gb|EIH22749.1| Rieske [2Fe-2S] domain protein [Escherichia coli 1.2264]
gi|386209862|gb|EII20347.1| Rieske [2Fe-2S] domain protein [Escherichia coli 9.0111]
gi|431375751|gb|ELG61074.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE135]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGGGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|422835761|ref|ZP_16883813.1| dioxygenase subunit alpha yeaW [Escherichia coli E101]
gi|371611534|gb|EHO00056.1| dioxygenase subunit alpha yeaW [Escherichia coli E101]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKILRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|432392208|ref|ZP_19635048.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE21]
gi|430920025|gb|ELC40945.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE21]
Length = 374
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|432869000|ref|ZP_20089795.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE147]
gi|431410916|gb|ELG94059.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE147]
Length = 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTLTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|260553994|ref|ZP_05826259.1| dioxygenase alpha subunit [Acinetobacter sp. RUH2624]
gi|424056655|ref|ZP_17794173.1| hypothetical protein W9I_03639 [Acinetobacter nosocomialis Ab22222]
gi|425740362|ref|ZP_18858536.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-487]
gi|260404880|gb|EEW98385.1| dioxygenase alpha subunit [Acinetobacter sp. RUH2624]
gi|407441105|gb|EKF47620.1| hypothetical protein W9I_03639 [Acinetobacter nosocomialis Ab22222]
gi|425495129|gb|EKU61319.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-487]
Length = 371
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVYEHEKESIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + + L R NWKV DNYL+ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACSVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|309794178|ref|ZP_07688602.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 145-7]
gi|308122083|gb|EFO59345.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 145-7]
Length = 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTIHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|300816313|ref|ZP_07096535.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 107-1]
gi|415873591|ref|ZP_11540811.1| putative dioxygenase subunit alpha YeaW [Escherichia coli MS 79-10]
gi|300531003|gb|EFK52065.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 107-1]
gi|342930798|gb|EGU99520.1| putative dioxygenase subunit alpha YeaW [Escherichia coli MS 79-10]
Length = 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHYGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|424060900|ref|ZP_17798391.1| hypothetical protein W9K_02014 [Acinetobacter baumannii Ab33333]
gi|404668852|gb|EKB36761.1| hypothetical protein W9K_02014 [Acinetobacter baumannii Ab33333]
Length = 371
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKESIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + + L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACSVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|218705300|ref|YP_002412819.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli UMN026]
gi|293405298|ref|ZP_06649290.1| dioxygenase subunit alpha yeaW [Escherichia coli FVEC1412]
gi|298380940|ref|ZP_06990539.1| dioxygenase subunit alpha yeaW [Escherichia coli FVEC1302]
gi|300899041|ref|ZP_07117328.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 198-1]
gi|331663290|ref|ZP_08364200.1| putative dioxygenase subunit alpha YeaW [Escherichia coli TA143]
gi|417586677|ref|ZP_12237449.1| rieske domain protein [Escherichia coli STEC_C165-02]
gi|419932354|ref|ZP_14449672.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli 576-1]
gi|432353712|ref|ZP_19596986.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE2]
gi|432402063|ref|ZP_19644816.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE26]
gi|432426236|ref|ZP_19668741.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE181]
gi|432460855|ref|ZP_19703006.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE204]
gi|432475978|ref|ZP_19717978.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE208]
gi|432489408|ref|ZP_19731289.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE213]
gi|432517865|ref|ZP_19755057.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE228]
gi|432537964|ref|ZP_19774867.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE235]
gi|432631536|ref|ZP_19867465.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE80]
gi|432641182|ref|ZP_19877019.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE83]
gi|432666168|ref|ZP_19901750.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE116]
gi|432774889|ref|ZP_20009171.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE54]
gi|432839423|ref|ZP_20072910.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE140]
gi|432886742|ref|ZP_20100831.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE158]
gi|432912839|ref|ZP_20118649.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE190]
gi|433018758|ref|ZP_20207004.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE105]
gi|433068084|ref|ZP_20254885.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE128]
gi|433158830|ref|ZP_20343678.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE177]
gi|433178444|ref|ZP_20362856.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE82]
gi|433203376|ref|ZP_20387157.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE95]
gi|218432397|emb|CAR13288.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli UMN026]
gi|291427506|gb|EFF00533.1| dioxygenase subunit alpha yeaW [Escherichia coli FVEC1412]
gi|298278382|gb|EFI19896.1| dioxygenase subunit alpha yeaW [Escherichia coli FVEC1302]
gi|300357341|gb|EFJ73211.1| rieske [2Fe-2S] domain protein [Escherichia coli MS 198-1]
gi|331059089|gb|EGI31066.1| putative dioxygenase subunit alpha YeaW [Escherichia coli TA143]
gi|345338180|gb|EGW70611.1| rieske domain protein [Escherichia coli STEC_C165-02]
gi|388417642|gb|EIL77478.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli 576-1]
gi|430875953|gb|ELB99474.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE2]
gi|430926893|gb|ELC47480.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE26]
gi|430956576|gb|ELC75250.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE181]
gi|430989568|gb|ELD06022.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE204]
gi|431005919|gb|ELD20926.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE208]
gi|431021444|gb|ELD34767.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE213]
gi|431051913|gb|ELD61575.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE228]
gi|431069878|gb|ELD78198.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE235]
gi|431171004|gb|ELE71185.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE80]
gi|431183447|gb|ELE83263.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE83]
gi|431201543|gb|ELF00240.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE116]
gi|431318604|gb|ELG06299.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE54]
gi|431389575|gb|ELG73286.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE140]
gi|431416787|gb|ELG99258.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE158]
gi|431440268|gb|ELH21597.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE190]
gi|431533696|gb|ELI10195.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE105]
gi|431585776|gb|ELI57723.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE128]
gi|431679518|gb|ELJ45430.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE177]
gi|431704808|gb|ELJ69433.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE82]
gi|431722444|gb|ELJ86410.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE95]
Length = 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|218699630|ref|YP_002407259.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli IAI39]
gi|422828891|ref|ZP_16877060.1| dioxygenase subunit alpha yeaW [Escherichia coli B093]
gi|218369616|emb|CAR17385.1| putative 2Fe-2S cluster-containing dioxygenase subunit [Escherichia
coli IAI39]
gi|371611992|gb|EHO00510.1| dioxygenase subunit alpha yeaW [Escherichia coli B093]
Length = 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLDEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|161523041|ref|YP_001585970.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189348133|ref|YP_001941329.1| ring-hydroxylating dioxygenase large subunit [Burkholderia
multivorans ATCC 17616]
gi|160346594|gb|ABX19678.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189338271|dbj|BAG47339.1| ring-hydroxylating dioxygenase large subunit [Burkholderia
multivorans ATCC 17616]
Length = 382
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 165/377 (43%), Gaps = 38/377 (10%)
Query: 23 PQIPI------EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
PQ+P E A T P ++YT +E ++F +W V + +L D + + +
Sbjct: 15 PQLPADFCSNPELAWTIPKTYYTSQEVFKVEEEKIFADTWICVAHRSELADANQYVTREV 74
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATR 135
++ R + + AF+NVC H L GSGK K+ CPYH WT+ LDG L A
Sbjct: 75 IGENVLIVRGKDKVLRAFYNVCPHRGHQLLEGSGKAKNVITCPYHAWTFKLDGALAHANN 134
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ F+ + LVP++V + FV +N+ A V + G + + +
Sbjct: 135 CDHVMAFDKENARLVPVKVEEYAGFVFINLNPNA--------GTVEEQLPGMEARLRAAC 186
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
+ L R NWK DNYL+ YH AH G + +++D Y+ +L+ ++
Sbjct: 187 PVIDDLKLAARFVSETPANWKSIVDNYLE-CYHCGPAHPGFSDSVKIDQYTHTLHGNWTL 245
Query: 256 QRCESGSTEGTDDTHRLGSKAIYA-----FIYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
Q G E ++ + +L A + +P M N P D VI P +V
Sbjct: 246 Q---FGHAESSERSFKLDPSIQDASFQGFWAWPCTMFN-VPPGADFMTVIHEFPVNAEVT 301
Query: 311 FD----YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-------CSG 359
YFL+ +L D + + + ++ + ED+ L E VQ+GL+S Y
Sbjct: 302 LQHYDIYFLNEALTDYQKNLIEWYRNV--FRPEDLRLVESVQKGLKSRGYRGQGRIMVDQ 359
Query: 360 RYAPSVEQTMYHFHSLL 376
R + E + HFH LL
Sbjct: 360 RRSGISEHGIAHFHHLL 376
>gi|397696679|ref|YP_006534562.1| rieske 2Fe-2S family protein [Pseudomonas putida DOT-T1E]
gi|397333409|gb|AFO49768.1| Rieske 2Fe-2S family protein [Pseudomonas putida DOT-T1E]
Length = 382
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 165/382 (43%), Gaps = 54/382 (14%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLK-----DPQDFFSGRIGEVE 80
PI +A + +YTD + LE V R+W +G+ L P DF +
Sbjct: 7 PIHEAHGLTNEFYTDQRYFELERDEVLGRNWACIGFASDLPTNSYVKPVDFMG-----LP 61
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G + FHNVC H L +G+ + CPYH WTY L+G L I GI
Sbjct: 62 LLMMRNREGLVQVFHNVCSHRGVKLVQQAGEVQGVIRCPYHSWTYDLNGGLKGTPHIGGI 121
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL L W V +N+ EA EE + W ++ L
Sbjct: 122 NQHKDERFACEKHGLKALRTTIWMDMVFINLSGEAPALEE-QLQPLTERW----TQFLGN 176
Query: 195 NGIDSSLSYLCRREYT-------IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+G+ L RRE + CNWK+ +NY + YH+P+ H L S +L+ +
Sbjct: 177 DGMS-----LLRREANGGAMSIEVNCNWKLAVENYCEA-YHLPWVHPSLNSYSRLEDHYN 230
Query: 248 SLYEKVSIQRCESGSTEGTDDTH----------RLGSKAIYAFIYPNFMINRYGPWMDTN 297
++E+ + Q + + TH RL + AF +PN ++
Sbjct: 231 IMFEEFAGQGSHAYNLSAVAGTHLPIFPSWPQDRLRTAEYVAF-FPNVLLGIQADHAFAM 289
Query: 298 LVIPLAP------TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGL 351
++ P+AP R V D LD + + +S + V EDI EG+Q+G
Sbjct: 290 MLEPVAPGKTIEHLRLFYVGDEALDSRYDASRKAVMESWR---VVFAEDIASVEGMQKGR 346
Query: 352 ESPAYCSGRYAPSVEQTMYHFH 373
SP Y G ++P ++ ++FH
Sbjct: 347 SSPGYSGGAFSPEMDLPTHYFH 368
>gi|432718918|ref|ZP_19953887.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE9]
gi|431262730|gb|ELF54719.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE9]
Length = 374
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P +I P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTIIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|445432700|ref|ZP_21439373.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC021]
gi|444758038|gb|ELW82540.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC021]
Length = 371
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 161/361 (44%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVYEHEKESIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + + L R NWKV DNYL+ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACSVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDGSLK---DDKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQYYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|26992049|ref|NP_747474.1| Rieske 2Fe-2S family protein [Pseudomonas putida KT2440]
gi|421523170|ref|ZP_15969801.1| Rieske 2Fe-2S family protein [Pseudomonas putida LS46]
gi|24987186|gb|AAN70938.1|AE016737_9 Rieske 2Fe-2S family protein [Pseudomonas putida KT2440]
gi|402752991|gb|EJX13494.1| Rieske 2Fe-2S family protein [Pseudomonas putida LS46]
Length = 396
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 165/382 (43%), Gaps = 54/382 (14%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLK-----DPQDFFSGRIGEVE 80
PI +A + +YTD + LE V R+W +G+ L P DF +
Sbjct: 21 PIHEAHGLTNEFYTDQRYFELERDEVLGRNWACIGFASDLPTNSYVKPVDFMG-----LP 75
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G + FHNVC H L +G+ + CPYH WTY L+G L I GI
Sbjct: 76 LLMMRNREGLVQVFHNVCSHRGVKLVQQAGEVQGVIRCPYHSWTYDLNGGLKGTPHIGGI 135
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL L W V +N+ EA EE + W ++ L
Sbjct: 136 NQHKDERFACEKHGLKALRTTIWMDMVFINLSGEAPALEE-QLQPLTERW----TQFLGN 190
Query: 195 NGIDSSLSYLCRREYT-------IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+G+ L RRE + CNWK+ +NY + YH+P+ H L S +L+ +
Sbjct: 191 DGMS-----LLRREANGGAMSIEVNCNWKLAVENYCEA-YHLPWVHPSLNSYSRLEDHYN 244
Query: 248 SLYEKVSIQRCESGSTEGTDDTH----------RLGSKAIYAFIYPNFMINRYGPWMDTN 297
++E+ + Q + + TH RL + AF +PN ++
Sbjct: 245 IMFEEFAGQGSHAYNLSAVAGTHLPIFPSWPQDRLRTAEYVAF-FPNVLLGIQADHAFAM 303
Query: 298 LVIPLAP------TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGL 351
++ P+AP R V D LD + + +S + V EDI EG+Q+G
Sbjct: 304 MLEPVAPGKTIEHLRLFYVGDEALDSRYDASRKAVMESWR---VVFAEDIASVEGMQKGR 360
Query: 352 ESPAYCSGRYAPSVEQTMYHFH 373
SP Y G ++P ++ ++FH
Sbjct: 361 SSPGYSGGAFSPEMDLPTHYFH 382
>gi|422781298|ref|ZP_16834083.1| Rieske domain-containing protein [Escherichia coli TW10509]
gi|323978016|gb|EGB73102.1| Rieske domain-containing protein [Escherichia coli TW10509]
Length = 374
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 163/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G ++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGEKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|432793005|ref|ZP_20027090.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE78]
gi|432798963|ref|ZP_20032986.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE79]
gi|431339749|gb|ELG26803.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE78]
gi|431343830|gb|ELG30786.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE79]
Length = 374
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ ++ + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSEMANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|448530139|ref|XP_003869996.1| hypothetical protein CORT_0E02780 [Candida orthopsilosis Co 90-125]
gi|380354350|emb|CCG23865.1| hypothetical protein CORT_0E02780 [Candida orthopsilosis]
Length = 465
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 173/378 (45%), Gaps = 46/378 (12%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SW+ + + LE +F+ SW + + P D++S ++ ++F + + +G +
Sbjct: 46 TLPASWWFNENIFNLEKRAIFHNSWLFCIHKSRFTKPGDYYSFQVTGIKFFIIKSRDGGL 105
Query: 92 HAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
AFHNVCRH A ++ SG + C YHGW+Y +G L A + ++ F+ E L
Sbjct: 106 KAFHNVCRHRAFPVVQKQSGTSTVLTCKYHGWSYNSNGKLSNAPQFDNVEGFDKSENSLY 165
Query: 151 PLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
P+ + T V +N ++ + ++W G + L+ D Y E
Sbjct: 166 PINMHVTPQGLVFVNFSRDPM---------PFDDWFSGLTTELNEFDFDD-YEYHMSYEL 215
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY------------STSLYEKVSIQR 257
+ NWK D Y + YH P AH GL S ++++Y +T + E+ ++
Sbjct: 216 HGDFNWKTLMDGYQEC-YHCPVAHPGLNSAFKMETYKVVPKNRYCRHYATIVREEPKEEK 274
Query: 258 ---CESGS-----TEGTDDTHRLGSK-----------AIYAFIYPNFMINRYGPWMDTNL 298
ES S +GT + SK ++ +++PN +N Y P +
Sbjct: 275 EIVKESSSWFGFGKKGTQEAVAPPSKRSSGNKGGEFDGLWVYLFPNNGVNCYSPAWYSIR 334
Query: 299 VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCS 358
V+PL+ T+ + +D + + D+A + + +QV++ED LC+ Q+ L Y S
Sbjct: 335 VLPLSATKTTLQYDIYTKKGI--DEATKTEFVDFLQQVEIEDYNLCQLTQQNLNEGIYSS 392
Query: 359 GRYAPSVEQTMYHFHSLL 376
G P E + ++ +L+
Sbjct: 393 GYLHPQKENGVLYYQNLV 410
>gi|194430025|ref|ZP_03062532.1| Rieske 2Fe-2S domain protein [Escherichia coli B171]
gi|415805203|ref|ZP_11501412.1| rieske domain protein [Escherichia coli E128010]
gi|419316826|ref|ZP_13858638.1| rieske domain protein [Escherichia coli DEC12A]
gi|419322955|ref|ZP_13864661.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC12B]
gi|419328946|ref|ZP_13870561.1| rieske domain protein [Escherichia coli DEC12C]
gi|419334494|ref|ZP_13876038.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC12D]
gi|419340061|ref|ZP_13881536.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC12E]
gi|420391482|ref|ZP_14890739.1| 2Fe-2S cluster-containing protein [Escherichia coli EPEC C342-62]
gi|194411952|gb|EDX28267.1| Rieske 2Fe-2S domain protein [Escherichia coli B171]
gi|323158717|gb|EFZ44731.1| rieske domain protein [Escherichia coli E128010]
gi|378167318|gb|EHX28231.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC12B]
gi|378170811|gb|EHX31686.1| rieske domain protein [Escherichia coli DEC12A]
gi|378172219|gb|EHX33076.1| rieske domain protein [Escherichia coli DEC12C]
gi|378186707|gb|EHX47330.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC12D]
gi|378189983|gb|EHX50569.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC12E]
gi|391313247|gb|EIQ70840.1| 2Fe-2S cluster-containing protein [Escherichia coli EPEC C342-62]
Length = 374
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDVAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|448540142|ref|ZP_21623379.1| Rieske 2Fe-2S family protein [Haloferax sp. ATCC BAA-646]
gi|448551740|ref|ZP_21629474.1| Rieske 2Fe-2S family protein [Haloferax sp. ATCC BAA-645]
gi|448554003|ref|ZP_21630793.1| Rieske 2Fe-2S family protein [Haloferax sp. ATCC BAA-644]
gi|445710016|gb|ELZ61839.1| Rieske 2Fe-2S family protein [Haloferax sp. ATCC BAA-646]
gi|445710130|gb|ELZ61952.1| Rieske 2Fe-2S family protein [Haloferax sp. ATCC BAA-645]
gi|445719188|gb|ELZ70870.1| Rieske 2Fe-2S family protein [Haloferax sp. ATCC BAA-644]
Length = 380
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 162/371 (43%), Gaps = 52/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP +E +VF R W G+ + D D+F+ IG+ + +V RD G + A
Sbjct: 26 PARYFTDPEVHEMEKEKVFGRYWVYAGHETHIPDAGDYFTRTIGDKQIIVTRDGEGDVRA 85
Query: 94 FHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T G + CPYH W Y LDG+L +
Sbjct: 86 FYNVCAHRGSKMLDDTPMTDPGSLNRITCPYHLWAYELDGSLQSTPKSFEEASLNPDLDD 145
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ + + +E GL+ + GP V +N E + + E E L +
Sbjct: 146 DAVSELDPEENGLMEVNTDAIGPLVFVNFEDEPSLSLAEQAGKMKTEL-----EDLPLGE 200
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-------DSYSTSL 249
+ + Y+ +ECNWK F NY + H H+ GL+L + Y L
Sbjct: 201 YEHARRYVSE----VECNWKTFSGNYSECD-HCQANHQDWVQGLELMESELEVNDYHWVL 255
Query: 250 YEKVSIQRCESGSTEGTDDTHRL--GSKAIYAFIYPNFMINRYGPW--MDTNLVIPLAPT 305
+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 256 HYK---------HKEDVDDEMRIHPEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEG 306
Query: 306 RCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R +++ D YF D L +++ E+ ++ S Q+Q ED L E GL S A + P+
Sbjct: 307 RFQLIADYYFRDSELSEEE---EKFVQTSRQLQEEDFELVERQYEGLTSGALGQAQLGPN 363
Query: 365 VEQTMYHFHSL 375
E T++ H L
Sbjct: 364 -EHTVHKLHRL 373
>gi|432947668|ref|ZP_20142824.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE196]
gi|433043391|ref|ZP_20230892.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE117]
gi|431457646|gb|ELH37983.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE196]
gi|431556722|gb|ELI30497.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE117]
Length = 374
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEVLTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|300721595|ref|YP_003710870.1| di(mono)oxygenase subunit alpha with ISP and Bet v1-like domains
[Xenorhabdus nematophila ATCC 19061]
gi|297628087|emb|CBJ88638.1| putative di(mono)oxygenase, alpha subunit with ISP and Bet v1-like
domains [Xenorhabdus nematophila ATCC 19061]
Length = 372
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 154/333 (46%), Gaps = 18/333 (5%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A T P+ +YT E +F +SW V + +L +P D+ + I V+ R +
Sbjct: 20 EAYTMPARFYTSQDVFDYEKEAIFAKSWICVAHGSELANPNDYVTREIIGESIVIVRGRD 79
Query: 89 GKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF NVC H L G GK K+ CPYH WT+ LDG+L A + +F+
Sbjct: 80 NILRAFFNVCPHRGHQLLKGEGKAKNVITCPYHAWTFKLDGSLAHARNCENVANFDKGLA 139
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
L P+++ + FV +NM ++++ V + G S+ +L+ L R
Sbjct: 140 QLTPVKLEEYAGFVFINM--------DMNAGTVEAQLPGLSTRVLAACPDVYDLKLAARF 191
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK DNYL+ YH AH G ++ +Q+D Y ++YEK S+Q G +D
Sbjct: 192 TTATPANWKSIVDNYLE-CYHCGPAHPGFSTSVQVDRYWHTMYEKWSLQ---FGYAIPSD 247
Query: 268 DTHRL-GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF 325
+ + G + + F ++P M N P VI P + Y+ +D
Sbjct: 248 QSFKFEGESSFHGFWLWPCTMYN-VTPVKGMMTVIYEFPVDAETTLQYYDIYFTNEDITE 306
Query: 326 IEQSLKD--SEQVQMEDIILCEGVQRGLESPAY 356
++SL + + + ED+ L E VQ+GL+S Y
Sbjct: 307 EQKSLIEWYRDVFRPEDLRLVESVQKGLKSRGY 339
>gi|421663689|ref|ZP_16103833.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC110]
gi|408713028|gb|EKL58203.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
OIFC110]
Length = 371
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++ G
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPGF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + G L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACGGIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|331683304|ref|ZP_08383905.1| putative dioxygenase subunit alpha YeaW [Escherichia coli H299]
gi|450189353|ref|ZP_21890509.1| hypothetical protein A364_09360 [Escherichia coli SEPT362]
gi|331079519|gb|EGI50716.1| putative dioxygenase subunit alpha YeaW [Escherichia coli H299]
gi|449321869|gb|EMD11876.1| hypothetical protein A364_09360 [Escherichia coli SEPT362]
Length = 374
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELIDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|260855661|ref|YP_003229552.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
11368]
gi|415791628|ref|ZP_11495400.1| rieske domain protein [Escherichia coli EPECa14]
gi|417298670|ref|ZP_12085908.1| Rieske [2Fe-2S] domain protein [Escherichia coli 900105 (10e)]
gi|419209664|ref|ZP_13752754.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8C]
gi|419215697|ref|ZP_13758704.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8D]
gi|419255014|ref|ZP_13797537.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10A]
gi|419261220|ref|ZP_13803648.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10B]
gi|419266995|ref|ZP_13809356.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10C]
gi|419272729|ref|ZP_13815031.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10D]
gi|419878076|ref|ZP_14399555.1| 2Fe-2S cluster-containing protein [Escherichia coli O111:H11 str.
CVM9534]
gi|419903115|ref|ZP_14422230.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM9942]
gi|419909222|ref|ZP_14427834.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10026]
gi|420109061|ref|ZP_14619249.1| 2Fe-2S cluster-containing protein [Escherichia coli O111:H11 str.
CVM9553]
gi|420118165|ref|ZP_14627500.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10021]
gi|420121884|ref|ZP_14630927.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10030]
gi|420129153|ref|ZP_14637693.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10224]
gi|420134074|ref|ZP_14642221.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM9952]
gi|424752062|ref|ZP_18180068.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756048|ref|ZP_18183885.1| 2Fe-2S cluster-containing protein [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425379558|ref|ZP_18763670.1| hypothetical protein ECEC1865_2630 [Escherichia coli EC1865]
gi|257754310|dbj|BAI25812.1| predicted 2Fe-2S cluster-containing protein [Escherichia coli
O26:H11 str. 11368]
gi|323152957|gb|EFZ39226.1| rieske domain protein [Escherichia coli EPECa14]
gi|378055529|gb|EHW17791.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8C]
gi|378063556|gb|EHW25724.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC8D]
gi|378102056|gb|EHW63740.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10A]
gi|378108551|gb|EHW70164.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10B]
gi|378112867|gb|EHW74440.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10C]
gi|378118105|gb|EHW79614.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10D]
gi|386257709|gb|EIJ13192.1| Rieske [2Fe-2S] domain protein [Escherichia coli 900105 (10e)]
gi|388336407|gb|EIL02951.1| 2Fe-2S cluster-containing protein [Escherichia coli O111:H11 str.
CVM9534]
gi|388372513|gb|EIL35934.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM9942]
gi|388373511|gb|EIL36780.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10026]
gi|394383652|gb|EJE61245.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10224]
gi|394401124|gb|EJE76977.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10021]
gi|394407976|gb|EJE82709.1| 2Fe-2S cluster-containing protein [Escherichia coli O111:H11 str.
CVM9553]
gi|394422968|gb|EJE96267.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM9952]
gi|394424451|gb|EJE97581.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CVM10030]
gi|408298350|gb|EKJ16293.1| hypothetical protein ECEC1865_2630 [Escherichia coli EC1865]
gi|421938351|gb|EKT95925.1| 2Fe-2S cluster-containing protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949858|gb|EKU06768.1| 2Fe-2S cluster-containing protein [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 374
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSIELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|346980160|gb|EGY23612.1| choline monooxygenase [Verticillium dahliae VdLs.17]
Length = 421
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 161/363 (44%), Gaps = 20/363 (5%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
+P+ P+ +AL P+SWYT LE +F R W + + +L +P D+ + F
Sbjct: 18 DPKAPV-RAL--PASWYTSQDMYELERRAIFSRKWLLTTHKSRLPNPGDWVKYDVAGYSF 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSW-FVCPYHGWTYGLDGTLLKATRITGIK 140
+V +D GKI+AFHNVCRH A + T + S+ F C YHGW+YGL G L KA ++
Sbjct: 75 IVVQDRKGKINAFHNVCRHRAFPVVTSTHGNSFIFSCKYHGWSYGLSGNLAKAPGYQDLE 134
Query: 141 DFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID- 198
F+ + GL P+ V F+ LN+ + + E G E +
Sbjct: 135 GFDKSQNGLFPIHVHIDKNGFIWLNLDAGETPE------IPWGEDFEGVDEQQRFEHYNF 188
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
Y E E NWK+ DNY + YH P AH + S L+SY + IQ
Sbjct: 189 EDYVYDHTWEMEGEYNWKILADNY-NECYHCPQAHPDIPSIADLNSYYVQT-KASHIQHF 246
Query: 259 ESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGS 318
+ E R+ + + +PN +N + +P PT+ + ++ F + +
Sbjct: 247 GQPTEEQIAKGFRVAA----TYFWPNASMNVSPHFFFIQRFMPSGPTKSVMKYEVFRNKN 302
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHC 378
D+ + + +++ ED LC Q+ L + + +G P +E+ F +
Sbjct: 303 SSDEDFGVINDM--YKRIMSEDKYLCLNSQKNLNAGIFVNGELHPELEKGPLFFQRTVRE 360
Query: 379 NLT 381
+T
Sbjct: 361 VMT 363
>gi|322695349|gb|EFY87159.1| Rieske [2Fe-2S] domain protein [Metarhizium acridum CQMa 102]
Length = 417
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 161/368 (43%), Gaps = 22/368 (5%)
Query: 22 NPQI-PIEKALTP----PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
NP + +E+ P P+SWYT LE +F + W + + +L D+ +
Sbjct: 15 NPTVDELEEGKNPIRALPASWYTSQDLYELERRAIFSKKWLLTTHKSRLAKQGDWLRYDV 74
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+F++ RD I+AFHNVCRH A I+ +G S C YHGW+YGL+G L KA
Sbjct: 75 AGFQFIITRDRQDSINAFHNVCRHRAFPIVTRETGHNSVLACKYHGWSYGLNGKLAKAPG 134
Query: 136 ITGIKDFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
++DF+ + GL PL V FV +NM V + + + E + +
Sbjct: 135 YQDMEDFDKSKNGLFPLHVHVDKNGFVWVNMDANEVPEVSWEQDF---EGVDEQPRFKNY 191
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
N D + E + NWK+ DNY + YH H + + L+SY +
Sbjct: 192 NFDDYVFDHTWEME--GDYNWKILADNY-NECYHCKTTHPDIPTIADLNSYYVET-KGCH 247
Query: 255 IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
IQ + E G + +PN +N + +P++P + + ++ +
Sbjct: 248 IQHFGNPKPEQI----ARGLNVASTYFFPNASMNVSPHFFFMQRFVPVSPGKAVMKYEVY 303
Query: 315 LDGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+ + D D I+ K ++ ED +LC QR + + + +G P +E+ +F
Sbjct: 304 RNKNSSDEDFKLIDDMYK---RIMSEDKVLCANAQRNINAGVFINGEMHPKMEKGPLYFQ 360
Query: 374 SLLHCNLT 381
L+ LT
Sbjct: 361 KLVRQQLT 368
>gi|432805850|ref|ZP_20039788.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE91]
gi|432934444|ref|ZP_20133953.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE184]
gi|433193770|ref|ZP_20377769.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE90]
gi|431354971|gb|ELG41685.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE91]
gi|431453425|gb|ELH33832.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE184]
gi|431717072|gb|ELJ81174.1| 2Fe-2S cluster-containing protein [Escherichia coli KTE90]
Length = 374
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNNVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|284172803|ref|YP_003406185.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haloterrigena
turkmenica DSM 5511]
gi|284017563|gb|ADB63512.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haloterrigena
turkmenica DSM 5511]
Length = 377
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 39/370 (10%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
EK+ P+ ++TDP +E +VF + W G+ + +K+ +F+ IG+ + +V R
Sbjct: 18 EKSNALPARYFTDPDVFEIEKDKVFGQYWVYAGHANCIKESGQYFTRTIGDRQLIVVRGH 77
Query: 88 NGKIHAFHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLLKATRI------ 136
+G++ AF NVC H S + T G CPYH WTY L+G L +
Sbjct: 78 DGEVKAFDNVCAHRGSKMVEDTPMTDPGDAKRIKCPYHLWTYDLEGELKSTPKSFDEAGL 137
Query: 137 ------TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE 190
+++F+ +E L + V T GP + +N+ ++ + E + V+ + E
Sbjct: 138 NPDLEDEDVQEFDAEENALNDVHVDTIGPLIFVNLSEDPMPLAE-QAGVMKDRL-----E 191
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
L + + R +ECNWKVF NY + H H+ G+ L+ +
Sbjct: 192 ALPL----GEYEHATRIVSEVECNWKVFASNYSECD-HCQANHQDWIKGISLNDSELEVN 246
Query: 251 EKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTR 306
+ + + DD R+ +A + + +PNF +N YG T ++ P+ R
Sbjct: 247 DYHWV--LHYTHAQDVDDEMRIHDEHEAQFHYFWPNFTVNMYGTADGYGTYIIDPIDTDR 304
Query: 307 CKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSV 365
+++ D YF D L +++ + ++ S Q+Q ED L E GL + A + P+
Sbjct: 305 FQLIADYYFRDSELSEEE---REFVRTSRQLQEEDFELVERQWEGLRTGALAQAQLGPN- 360
Query: 366 EQTMYHFHSL 375
E T++ FH L
Sbjct: 361 EHTVHKFHQL 370
>gi|170770108|ref|ZP_02904561.1| Rieske 2Fe-2S domain protein [Escherichia albertii TW07627]
gi|170121065|gb|EDS89996.1| Rieske 2Fe-2S domain protein [Escherichia albertii TW07627]
Length = 374
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----DAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ LVP+ + + FV +NM A V ++ G +++++
Sbjct: 133 NFDSEKAQLVPVRLEEYAGFVFINMNPNATS--------VEDQLPGLAAKVIEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L + VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVKSVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|221198954|ref|ZP_03571999.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2M]
gi|221205214|ref|ZP_03578230.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2]
gi|421469692|ref|ZP_15918133.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|221175005|gb|EEE07436.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2]
gi|221181405|gb|EEE13807.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2M]
gi|400229220|gb|EJO59079.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 382
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 164/377 (43%), Gaps = 38/377 (10%)
Query: 23 PQIPI------EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
PQ+P E A T P ++YT +E ++F +W V + +L D + + +
Sbjct: 15 PQLPADFCSNPELAWTIPKTYYTSQEVFKVEEEKIFADTWICVAHRSELADANQYVTREV 74
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATR 135
++ R + + AF+NVC H L GSGK K+ CPYH WT+ LDG L A
Sbjct: 75 IGENVLIVRGKDKVLRAFYNVCPHRGHQLLEGSGKAKNVITCPYHAWTFKLDGALAHANN 134
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ F+ + LVP++V + FV +N+ A V + G + + +
Sbjct: 135 CDHVMAFDKENASLVPVKVEEYAGFVFINLNPNA--------GTVEAQLPGMEARLRAAC 186
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
+ L R NWK DNYL+ YH AH G + +++D Y+ +L+ ++
Sbjct: 187 PVIDDLKLAARFVSETPANWKSIVDNYLE-CYHCGPAHPGFSDSVKIDQYTHTLHGNWTL 245
Query: 256 QRCESGSTEGTDDTHRLGSKAIYA-----FIYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
Q G E ++ + +L A + +P M N P D VI P +V
Sbjct: 246 Q---FGHAESSERSFKLDPSIKDASFQGFWAWPCTMFN-VPPGADFMTVIYEFPVNAEVT 301
Query: 311 FD----YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-------CSG 359
YFL+ L D + + + ++ + ED+ L E VQ+GL+S Y
Sbjct: 302 LQHYDIYFLNEELTDYQKNLIEWYRNV--FRPEDLRLVESVQKGLKSRGYRGQGRIMVDQ 359
Query: 360 RYAPSVEQTMYHFHSLL 376
R + E + HFH LL
Sbjct: 360 RRSGISEHGIAHFHHLL 376
>gi|322712260|gb|EFZ03833.1| hypothetical protein MAA_00907 [Metarhizium anisopliae ARSEF 23]
Length = 1295
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 17/351 (4%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F + W + + +L + D+ + +F++ RD I+A
Sbjct: 32 PASWYTSQDLYELERRAIFSKKWLLTTHKSRLAEQGDWLRYDVAGFQFIITRDRQDNINA 91
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A I+ +G S C YHGW+YGL+G L KA ++DF+ + GL PL
Sbjct: 92 FHNVCRHRAFPIVTKETGHNSVLACKYHGWSYGLNGKLAKAPGYQDMEDFDKSKNGLFPL 151
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
V FV +NM V + + + E + + + N D + E
Sbjct: 152 HVHVDKNGFVWVNMDANEVPEVAWEHDF---EGVDEQARFKNYNFDDYVFDHTWEMEG-- 206
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
+ NWK+ DNY + YH H + + L+SY Y + + + R
Sbjct: 207 DYNWKILADNY-NECYHCKTTHPDIPTIADLNSY----YVETKGGHIQHFGNPKPEQIAR 261
Query: 272 LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFIEQSL 330
G + +PN +N + +PL+P + + ++ + + + D D I+
Sbjct: 262 -GLNVASTYFFPNASMNVSPHFFFMQRFVPLSPGKAVMKYEVYRNKNSGDEDFKLIDDMY 320
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
K ++ ED +LC QR + + + +G P +E+ +F L+ LT
Sbjct: 321 K---RIMSEDKVLCANAQRNINTGVFINGEMHPKMEKGPLYFQKLVRQALT 368
>gi|342873533|gb|EGU75698.1| hypothetical protein FOXB_13806 [Fusarium oxysporum Fo5176]
Length = 415
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 154/346 (44%), Gaps = 35/346 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PS+WY P LE +F + W + + ++L D+ EFVV RD G ++A
Sbjct: 29 PSTWYNSPEMYELEKRAIFSKKWLLTTHQNRLPKAGDWMKFNTTGYEFVVARDRKGNLNA 88
Query: 94 FHNVCRHHASILATG--SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL-- 149
FHN+CRH A + G G S F C YHGW+YGL G L KA +++F+ + GL
Sbjct: 89 FHNICRHRAFPVVQGGQQGNSSIFACKYHGWSYGLSGNLAKAPNYDQLENFDKSKNGLFK 148
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
+ L+V +G FV +N+ E + E + + +N D Y +EY
Sbjct: 149 IHLKVDAYG-FVWVNLDS----SENPEPWTRYFEGIDQQERLEKVNWDD----YTLDKEY 199
Query: 210 TIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG------ 261
++E NWK+ DN+ + YH P H L + L +C++G
Sbjct: 200 SMEGEYNWKILADNF-NECYHCPTTHPDLPTLADLGK-----------TKCDTGLGWIKH 247
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
S+ T++ + G + + YP+ + +M +PL PT + + F + + +
Sbjct: 248 SSIQTEEQKKSGMQLASTYFYPSASVVVLPHFMMIQRFMPLGPTTSSMHYQIFRNKNSSE 307
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ L +V ED LC G Q+ L + + SG P +E
Sbjct: 308 EDFHNIADL--YARVVSEDKDLCIGAQKNLNAGIFVSGELHPRLEH 351
>gi|399076264|ref|ZP_10751917.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037597|gb|EJL30782.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 391
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 173/392 (44%), Gaps = 39/392 (9%)
Query: 2 SSSSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY 61
S S + L AAQ + P+ +A P++ Y+DP LE R+F R+W V +
Sbjct: 3 SVSQSHGTGLTAAQIAAV----RAPLSRASLLPATVYSDPEIFRLEKERIFARTWLPVCH 58
Query: 62 TDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSG--KKSWFVCPY 119
Q+++P F S ++ + R G+I NVCRH + L G G K + +CPY
Sbjct: 59 ISQIREPGSFVSRQLAGEAIMALRGREGEIRVMSNVCRHRNTTLVDGEGQCKGNRIICPY 118
Query: 120 HGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV 179
HGWTYGLDG LL A + +DF +E L W FV +N +A + + +
Sbjct: 119 HGWTYGLDGQLLAAPFMDQAEDFARREIKLPEFRHEVWHGFVFVNFDADA---QSLAEQM 175
Query: 180 VANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAH-----K 234
V E L + + R T+ NWK+ +N+ + YH P+ H K
Sbjct: 176 VEFEPLVAPYRYEDMEAFEM-------RRSTVPWNWKISLENFSE-AYHQPWVHTNTAEK 227
Query: 235 GLASGLQ--LDS---YSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINR 289
G + L LD+ YS + + ++ + D + + +YP +M
Sbjct: 228 GFPAALAEYLDANGPYSAFFLPEEKGEHIKTFTPPHADMPDAFLRRVMVFNVYP-YMHAL 286
Query: 290 YGP----WMDTNLVIPLAPTRCKVVFDYFL-DGSLKDDKAFIEQSLKDS--EQVQMEDII 342
P ++D N+ ++V+ L GS + + L S E V +EDI
Sbjct: 287 TDPATPIFLDFNIK---NENEHELVWHVLLPKGSSQKPDILDDVKLFGSFIEPVLLEDIS 343
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+C GV RG++S GR + +E+ ++ FH+
Sbjct: 344 VCTGVGRGVQSRFVTQGRLS-HMEKPLHQFHN 374
>gi|386624427|ref|YP_006144155.1| putative 2Fe-2S cluster-containing protein [Escherichia coli O7:K1
str. CE10]
gi|349738165|gb|AEQ12871.1| putative 2Fe-2S cluster-containing protein [Escherichia coli O7:K1
str. CE10]
Length = 374
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF ++W V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKNWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLDEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|254480564|ref|ZP_05093811.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
gi|214039147|gb|EEB79807.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
Length = 394
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 165/378 (43%), Gaps = 40/378 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVE 80
PI +A P+S Y D E + +W +GYT +L+D P DF +
Sbjct: 21 PIAEARGMPNSVYLDSELFEFERDEILGNTWAAIGYTSELQDTAYVKPLDFMG-----LS 75
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G ++ FHNVC H +L G + + CPYH WTY LDG L I G+
Sbjct: 76 LLIMRNKRGDLNVFHNVCSHRGMVLVEEEGSVAGSIRCPYHSWTYNLDGELRGTPHIGGV 135
Query: 140 -----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV--VANEWLGGSSEIL 192
+ F+ + GL + + W + +N+ +A E + + +A W + +
Sbjct: 136 GVHTTEGFSCENHGLKAVRSSEWMGIIFINLSGQA---ESFNDYIAPLAQRW----EQFV 188
Query: 193 SINGIDSSLSYLC--RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
+G+D C R I NWK+ +NY + YH+P+ H L LD + +
Sbjct: 189 GEDGLDKLQVAACGSRMTLDIRANWKLAVENYCEA-YHLPWVHPDLNKYSPLDQHYNIID 247
Query: 251 EKVSIQRCESGSTEGTDDTH---------RLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
+S Q + + T T + +A Y +YPN ++ ++ P
Sbjct: 248 NTMSGQGSYTYTLSETAGTMLPQFSNWPPQQIRQAEYLSLYPNVLLGLQADHAFAVILQP 307
Query: 302 LAPTRCKVVFDYFLDGSLKDDKAF--IEQSLKDSEQVQM-EDIILCEGVQRGLESPAYCS 358
LA R + G A+ ++ +S +V ED+ + EG+Q+G +SP +
Sbjct: 308 LANNRTAEQLQLYYVGEKATGDAYSGCRAAVMESWRVVFSEDVRVVEGMQKGRQSPGFQG 367
Query: 359 GRYAPSVEQTMYHFHSLL 376
G ++P ++ +HFHS L
Sbjct: 368 GVFSPIMDAPTHHFHSWL 385
>gi|419923627|ref|ZP_14441564.1| putative dioxygenase subunit alpha yeaW [Escherichia coli 541-15]
gi|388393420|gb|EIL54802.1| putative dioxygenase subunit alpha yeaW [Escherichia coli 541-15]
Length = 374
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L + GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSSEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G ++++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLAAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|238881790|gb|EEQ45428.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 432
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 50/386 (12%)
Query: 23 PQIPIEKAL----TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGE 78
PQ+ K L T P+SW+T S LE +F++SW ++ + D+++ +
Sbjct: 14 PQLDTPKMLVGEHTLPASWWTSESIFELEKRAIFHKSWMFCTHSSRFAKAGDYYAFNLAG 73
Query: 79 VEFVVCRDD-NGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRI 136
+ F V + +G++ AFHNVCRH A I+ G + C YHGW+Y DG L +A
Sbjct: 74 INFFVIKSKIDGQLKAFHNVCRHRAYPIVRKDQGSSTVLGCKYHGWSYNSDGILRRAPHF 133
Query: 137 TGIKDFNVKEFGLVPLE--VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
++ F +E L P+ V T G V +N + + ++W G + +
Sbjct: 134 DNVEGFVKEENSLFPINTHVTTQG-LVFVNFSSDPI---------PFDDWFSGLTP--EM 181
Query: 195 NGID-SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK- 252
N D S Y E + NWK D Y + H P H GL + ++++Y +
Sbjct: 182 NEFDFSDYEYHMSYELDGKFNWKTLMDGYQE---HCPTTHPGLNTAFKMETYKVVPKNRY 238
Query: 253 ----VSIQRCESGSTEGTDDTHRLGSK------------------AIYAFIYPNFMINRY 290
I R E E D + G K ++ +++P+ IN Y
Sbjct: 239 CRHFAKIVRQEK-PVEKQDSSSWFGFKKETKEVKETKPNPGGEFDGLWVYLFPSNGINCY 297
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRG 350
P + V+P+ R + +D + L D++ ++ + +QV++ED LCE QR
Sbjct: 298 SPAWYSIRVLPITAKRTILQYDIYTKKGLDDEEK--KEFVDFLQQVELEDFDLCELTQRN 355
Query: 351 LESPAYCSGRYAPSVEQTMYHFHSLL 376
L Y +G P E+ + ++ ++
Sbjct: 356 LNERIYSTGYLHPEKERGVLYYQGVV 381
>gi|448603985|ref|ZP_21657409.1| Rieske 2Fe-2S family protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445744781|gb|ELZ96253.1| Rieske 2Fe-2S family protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 385
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 167/373 (44%), Gaps = 56/373 (15%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP +E +VF + W G+ + D D+F+ IG + +V RD +G + A
Sbjct: 31 PAKYFTDPEVHEMEKEKVFGQYWVYAGHETHIPDAGDYFTRTIGGKQIIVTRDGDGDVRA 90
Query: 94 FHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTLLKATRI------------ 136
F+NVC H S + T G S CPYH W Y LDG+L +
Sbjct: 91 FYNVCAHRGSKMLDETPMTDPGSLSRITCPYHLWAYELDGSLQSTPKSFEEASLNPDLDD 150
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI--LSI 194
+ + + +E GL+ + GP V +N E+ S +A + +E+ L +
Sbjct: 151 DAVSELDPEENGLMEVHTDAIGPLVFVNF-------EDKPSLSLAEQAGSMKTELEDLPL 203
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-------DSYST 247
+ + Y+ +ECNWK F NY + H H+ GL+L + Y
Sbjct: 204 GEYEHARRYVSE----VECNWKTFSGNYSECD-HCQANHQDWVRGLELMDSELEVNDYHW 258
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGP--WMDTNLVIPLA 303
L+ K E DD R+ +A + + +PNF +N YG T ++ P+
Sbjct: 259 VLHYK---------HREDVDDEMRIHPEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPID 309
Query: 304 PTRCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
R +++ D YF D L +++ E+ ++ S Q+Q ED L E GL+S A +
Sbjct: 310 EGRFQLIADYYFRDADLSEEE---EKFVQTSRQLQEEDFELVERQYEGLKSGALGQAQLG 366
Query: 363 PSVEQTMYHFHSL 375
P+ E T++ H L
Sbjct: 367 PN-EHTVHKLHRL 378
>gi|302410235|ref|XP_003002951.1| naphthalene 1,2-dioxygenase subunit alpha [Verticillium albo-atrum
VaMs.102]
gi|261357975|gb|EEY20403.1| naphthalene 1,2-dioxygenase subunit alpha [Verticillium albo-atrum
VaMs.102]
Length = 421
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 161/363 (44%), Gaps = 20/363 (5%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
+P+ P+ +AL P+SWYT LE +F R W + + +L +P D+ + F
Sbjct: 18 DPKAPV-RAL--PASWYTSQDMYELERRAIFSRKWLLTTHKSRLPNPGDWVKYDVAGYSF 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSW-FVCPYHGWTYGLDGTLLKATRITGIK 140
+V +D GKI+AFHNVCRH A + T + S+ F C YHGW+YGL G L KA ++
Sbjct: 75 IVVQDRKGKINAFHNVCRHRAFPVVTSTHGNSFIFSCKYHGWSYGLSGNLAKAPGYQDLE 134
Query: 141 DFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID- 198
F+ + GL P+ V F+ LN+ + + E G E +
Sbjct: 135 GFDKSKNGLFPIHVHLDKNGFIWLNLDAGETPE------IPWGEDFEGVDEQQRFEHYNF 188
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
Y E E NWK+ DNY + YH P AH + S L+SY + IQ
Sbjct: 189 EDYVYDHTWEMEGEYNWKILADNY-NECYHCPQAHPDIPSIADLNSYYVQT-KASHIQHF 246
Query: 259 ESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGS 318
+ E R+ + + +PN +N + +P PT+ + ++ F + +
Sbjct: 247 GQPTEEQIAKGFRVAA----TYFWPNASMNVSPHFFFIQRFMPSGPTKSVMKYEVFRNKN 302
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHC 378
D+ + + +++ ED LC Q+ L + + +G P +E+ F +
Sbjct: 303 SSDEDFGVINDM--YKRIMSEDKYLCLNSQKNLNAGIFVNGELHPELEKGPLFFQRTVRE 360
Query: 379 NLT 381
+T
Sbjct: 361 VMT 363
>gi|238496999|ref|XP_002379735.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Aspergillus flavus NRRL3357]
gi|220694615|gb|EED50959.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Aspergillus flavus NRRL3357]
Length = 408
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 162/358 (45%), Gaps = 27/358 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P KAL PSSWY + ALE +F + W VV + + D+ + + + +
Sbjct: 20 PQTKAL--PSSWYRSEALYALERRAIFSKKWMVVTHRTRFTKTGDYVQLNVAGYGYFIIK 77
Query: 86 DDNGKIHAFHNVCRHHA--SILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
D G I AFHNVCRH A I + G SG + C YHGW+YGLDG L KA R ++ F
Sbjct: 78 DRTGTIRAFHNVCRHRAYPVIQSEGESGTANIISCKYHGWSYGLDGKLAKAPRYQDVEGF 137
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSL 201
++ GL P+ V + ++G V+ E D V+ E G + + G D S
Sbjct: 138 EKEKMGLYPIHVH------IDHLGFVWVNLEAGDRPSVSWEEDFEGVDQQPRLQGFDLS- 190
Query: 202 SYLCRREYTI--ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
Y +++ + NWK DNY + YH P H G+ + L Y + IQ
Sbjct: 191 QYHFDHTWSMMGDYNWKTLADNY-NECYHCPTGHPGVNAISDLSKYYVET-KAGHIQHFN 248
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD-YFLDGS 318
+ DT LG F +PN I + +P++ T+ ++ +D Y + +
Sbjct: 249 ADK----QDTPGLG--IFSTFYFPNASITVSPSFWYMMRCLPVSATQTRMEYDVYRHNNA 302
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+D +I++ K QV ED LC Q+ L + + +G P E+ +F ++
Sbjct: 303 SNEDFTYIDEFFK---QVLREDKDLCNAAQKNLNAGVFVNGELHPRAEKGPLYFQKMV 357
>gi|443469413|ref|ZP_21059582.1| Benzoate 1,2-dioxygenase [Pseudomonas pseudoalcaligenes KF707]
gi|443473303|ref|ZP_21063328.1| Benzoate 1,2-dioxygenase [Pseudomonas pseudoalcaligenes KF707]
gi|442898816|gb|ELS25411.1| Benzoate 1,2-dioxygenase [Pseudomonas pseudoalcaligenes KF707]
gi|442903866|gb|ELS29157.1| Benzoate 1,2-dioxygenase [Pseudomonas pseudoalcaligenes KF707]
Length = 389
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 33/370 (8%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E A T PS ++ D E R+F R+W V G+ + ++P + + + VV R+
Sbjct: 22 ETAFTLPSRYFFDEGLFKAERDRIFMRAWHVAGHKSEFREPGQYVVVDLFDQSVVVARNM 81
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFV--CPYHGWTYGLDGTLLKATRITGIKDFNVK 145
G+I AFHNVC+H + L G + V C YH W Y +DG+L A R +KDF +
Sbjct: 82 KGEIRAFHNVCQHRGNRLLDGRRGTTGGVVRCAYHSWCYEMDGSLRSAPRCERMKDFEPQ 141
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+F + L V G FV N A E+ + G E+ + + +
Sbjct: 142 QFNIPQLRVEELGGFVYFNFDPGAPSLAEL--------FPGADEEMHRVFPDLERMRLIE 193
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYA---HKGLASGLQLDSYSTSLYEK----VSIQRC 258
++ + NWKV DN ++G YH + H LA + Y + + ++
Sbjct: 194 EQDVIVPANWKVIMDNSIEG-YHFKLSGPCHIDLAKLIDFKGYRLTKRDNWWTYIAPANL 252
Query: 259 ESGSTEGTDDTHRLGSKAIYAFI--YPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
++G G + + I +PN F + ++ T ++IPL R + F Y+
Sbjct: 253 QAGEAYGVKLRNDPNPNECFFNIGMWPNNTFYTFPFSEFLGTFIMIPLDAERSLLRFGYY 312
Query: 315 LDGSLKDDKAFIEQSLKD--SEQVQMEDIILCEGVQRGLESPAYCSGRY------APSVE 366
S ++ A + ++ +EQ+ EDI L VQ+GL S Y GRY + E
Sbjct: 313 ---SSNEETAEVSKACMRWMNEQLGPEDIELNITVQKGLRSLGYDQGRYMIDAQRSNESE 369
Query: 367 QTMYHFHSLL 376
++HFH L+
Sbjct: 370 HLVHHFHRLV 379
>gi|170679804|ref|YP_001743444.1| Rieske (2Fe-2S) domain-containing protein [Escherichia coli
SMS-3-5]
gi|170517522|gb|ACB15700.1| Rieske 2Fe-2S domain protein [Escherichia coli SMS-3-5]
Length = 374
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P I P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTAIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|261202946|ref|XP_002628687.1| Rieske domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590784|gb|EEQ73365.1| Rieske domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 409
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 23/352 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY E +F + W V + ++ +P DF + F + +D G++
Sbjct: 16 TLPASWYHSARLYEAERRAIFSQKWLQVTHANRFVNPGDFARYEMAGYPFFIIKDRTGEL 75
Query: 92 HAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AFHNVCRH A ++ SGK K C YHGW+YGL+G L KA R + FN +++ L
Sbjct: 76 RAFHNVCRHRAFPVVKEKSGKCKKILSCGYHGWSYGLNGKLAKAPRFQDLAGFNAEDYSL 135
Query: 150 VP--LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
P L V G FV +N+ + V D G++++ G Y
Sbjct: 136 FPVHLHVDRCG-FVWVNLDAKEVPSVSWDEQC-------GTADVQERLGDFQMEKYSYDH 187
Query: 208 EYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
++ E NWK DNY + YH P AH G+A+ L +Y+ + +
Sbjct: 188 SWSFEAEYNWKAMVDNY-NECYHCPVAHPGIAATTDLQNYTVTTDQGFIAHFARPKPEYA 246
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK-A 324
T + S +++P+ + ++ +PL+ T ++ ++ + D++ A
Sbjct: 247 TGNN----SNVAPTYLFPSSAVTVNTVYLYLTRCVPLSATSVRMEYEVYRHAQCTDEEFA 302
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
++ +K Q++ ED +LC VQ L Y SG P E + + L+
Sbjct: 303 EVDAFMK---QIEEEDRVLCTLVQENLNVGVYRSGPLHPRDEMGVAYVKELV 351
>gi|260431239|ref|ZP_05785210.1| rieske domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415067|gb|EEX08326.1| rieske domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 374
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 151/345 (43%), Gaps = 25/345 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ ++L + +YTDP+ E + R+WQ G+ Q+++P D+F+ I R
Sbjct: 4 PLTRSLE--ARYYTDPAIFEQEKQGLLARTWQFAGHVAQVREPGDYFAFEIAGQNLFCIR 61
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G+I F+NVC+H A + TG+G VCPYH WTY L G L I + F+ +
Sbjct: 62 GRDGEIRTFYNVCQHRAHEMVTGAGNTRVVVCPYHAWTYELTGHLRAGPNIKSVPGFDRR 121
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG-SSEILSINGIDSSLSYL 204
L P+ + F+ +N+ +A ++W G +EI + L L
Sbjct: 122 AICLTPVRTELFNGFIFVNLDDDAAPM---------DDWYPGVRAEIRAFVPQIDDLEPL 172
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASG--------LQLDSYSTSLYEKVSIQ 256
E CNWKV +NY + YH P H A+G +Q D+ + +
Sbjct: 173 EWVEIPENCNWKVSIENYSE-CYHCPTNHPTFATGVVKPETYDIQPDAGGGYVLRHTTEC 231
Query: 257 RCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFL 315
+ T D + F++P F Y G ++T L C V ++
Sbjct: 232 QSLDKMTYPIDLSVTHAGDYQSWFLWPMFSFQCYPGNVLNTYHWRALDADHCTVWRGWYT 291
Query: 316 DGSLKDDKAFIEQ-SLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+G + A I Q +++D E EDI L E V RGL+S Y G
Sbjct: 292 EGG--SESAVIRQLAVQDRETTVEEDIRLVESVHRGLKSRGYRPG 334
>gi|239612503|gb|EEQ89490.1| Rieske domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350531|gb|EGE79388.1| Rieske domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 409
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 23/352 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY E +F + W V + ++ +P DF + F + +D G++
Sbjct: 16 TLPASWYHSARLYEAERRAIFSQKWLQVTHANRFVNPGDFARYEMAGYPFFIIKDRTGEL 75
Query: 92 HAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AFHNVCRH A ++ SGK K C YHGW+YGL+G L KA R + FN +++ L
Sbjct: 76 RAFHNVCRHRAFPVVKEKSGKCKKILSCGYHGWSYGLNGKLAKAPRFQDLAGFNAEDYSL 135
Query: 150 VP--LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
P L V G FV +N+ + V D G++++ G Y
Sbjct: 136 FPIHLHVDRCG-FVWVNLDAKEVPSVSWDEQC-------GTADVQERLGDFQMEKYSYDH 187
Query: 208 EYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
++ E NWK DNY + YH P AH G+A+ L +Y+ + +
Sbjct: 188 SWSFEAEYNWKAMVDNY-NECYHCPVAHPGIAATTDLQNYTVTTDQGFIAHFARPKPEYA 246
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK-A 324
T + S +++P+ + ++ +PL+ T ++ ++ + D++ A
Sbjct: 247 TGNN----SNVAPTYLFPSSAVTVNTVYLYLTRCVPLSATSVRMEYEVYRHAQCTDEEFA 302
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
++ +K Q++ ED +LC VQ L Y SG P E + + L+
Sbjct: 303 EVDAFMK---QIEEEDRVLCTLVQENLNVGVYRSGPLHPRDEMGVAYVKELV 351
>gi|416897721|ref|ZP_11927369.1| rieske domain protein [Escherichia coli STEC_7v]
gi|417114851|ref|ZP_11965987.1| Rieske [2Fe-2S] domain protein [Escherichia coli 1.2741]
gi|422799087|ref|ZP_16847586.1| Rieske domain-containing protein [Escherichia coli M863]
gi|323968569|gb|EGB63975.1| Rieske domain-containing protein [Escherichia coli M863]
gi|327252923|gb|EGE64577.1| rieske domain protein [Escherichia coli STEC_7v]
gi|386140270|gb|EIG81422.1| Rieske [2Fe-2S] domain protein [Escherichia coli 1.2741]
Length = 374
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 162/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G ++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGEKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH H G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPVHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|389864565|ref|YP_006366805.1| [2Fe-2S] dioxygenase [Modestobacter marinus]
gi|388486768|emb|CCH88320.1| Putative [2Fe-2S] dioxygenase [Modestobacter marinus]
Length = 373
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 164/374 (43%), Gaps = 24/374 (6%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P T P +YTDP+ ALE VF W + L P F ++G +V R
Sbjct: 7 PASLISTLPGQYYTDPAIFALEQSHVFEDMWFCAVRSSDLPTPGSFKKVQVGRESVLVVR 66
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
+G++ AF NVCRH A I SG K F CPYH WTY L+G L+ A +T + D +
Sbjct: 67 SRDGQLRAFLNVCRHRGAQICTEDSGAVKRAFQCPYHAWTYDLEGKLIAAPNLTKMPDID 126
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVAN--EWLGGSSEILSINGID-SS 200
E+GLVP+ + W + + + KE + +VVA+ E LG ++ SI D S
Sbjct: 127 RVEYGLVPVALREWLGYAWVCLAKEP---PSFEGDVVASVVERLG---DVDSIERYDLDS 180
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ-- 256
LS R Y + NWK+ +N+++ YH H L L D Y+ + +
Sbjct: 181 LSVGRRITYDVRANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYFVGHGAEFG 239
Query: 257 -RCESGSTEGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+ + +G+ RL + YA I P +N + + + P++ R
Sbjct: 240 DDVQGFTVDGSKGFQRLPGVDEDQDRRYYAITIRPTVFVNLVPDHVIVHRMFPVSADRTI 299
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
V D+ + + + +S++ +V +D CE Q + S AY +G E
Sbjct: 300 VECDWLYSHDVVESGRDVSRSVELFHRVNEQDFAACERTQPAMSSRAYANGGVLVPSEHH 359
Query: 369 MYHFHSLLHCNLTN 382
+ FH L L+
Sbjct: 360 ISAFHEWLTQRLSR 373
>gi|189199810|ref|XP_001936242.1| naphthalene 1,2-dioxygenase subunit alpha [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983341|gb|EDU48829.1| naphthalene 1,2-dioxygenase subunit alpha [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 451
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 22/351 (6%)
Query: 24 QIPIEKALTP--PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
++P EK P++WYT LE +F R W ++ + +L +P DF + +
Sbjct: 50 EVPPEKQAVRALPANWYTSEEMYQLERRAIFTRRWLILTHKSRLANPGDFLRYNVANYDI 109
Query: 82 VVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
VV +D G I+AFHNVCRH A ++ G F C YHGW+YGL+G L KA ++
Sbjct: 110 VVSKDRTGTINAFHNVCRHRAYPVVEKDGGNAKIFSCKYHGWSYGLNGNLAKAPGYQELE 169
Query: 141 DFNVKEFGLVPLEVAT-WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+F GL P+ FV +NM + + +S + + N D
Sbjct: 170 NFEKANNGLFPIHTRIDRNGFVWINMDSKKEPEVSWESQF---DHVDEQKRFDQFNFDDY 226
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
+ E NWK+ DN+ + YH H L +G+ +D S +Y + +
Sbjct: 227 EFDHTWNLEGPF--NWKILADNF-NECYHCKSTHPDLTTGI-IDLESYDVYCSADHIQHD 282
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
+ + D LG + + +PN F + ++ +M +P +PT + ++ + +
Sbjct: 283 PNTPQDRKD---LGQEICSTYCFPNASFTVTKHFLFMQK--FMPKSPTESVMYYEVWRNK 337
Query: 318 -SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
S ++D I + K +V ED +LCE Q+ +E+ + +G P +E+
Sbjct: 338 HSSEEDFLLISDTYK---RVMGEDKVLCERAQKNIEAGVFVNGELHPHMEK 385
>gi|398405734|ref|XP_003854333.1| hypothetical protein MYCGRDRAFT_99625 [Zymoseptoria tritici IPO323]
gi|339474216|gb|EGP89309.1| hypothetical protein MYCGRDRAFT_99625 [Zymoseptoria tritici IPO323]
Length = 425
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 150/347 (43%), Gaps = 24/347 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PS+WY P LE +F R WQ++ + ++ K P D+ I +E V+ D N KI+
Sbjct: 38 PSNWYNSPEMFDLERRAIFSRKWQLITHKNRFKQPGDWLKWTITGLEVVLSMDRNNKING 97
Query: 94 FHNVCRHHASILATG--SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
FHNVCRH A + T SG F C YHGW+YGL G L KA + DF+ + L P
Sbjct: 98 FHNVCRHRAYPVVTSGDSGNSKIFSCKYHGWSYGLSGKLAKAPGYDKLDDFSKENNSLYP 157
Query: 152 LEVAT-WGPFVLLNMGKEA---VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
+ V FV +N+ ++ V E+ V E G I +++ + S+
Sbjct: 158 IHVRIDHQGFVWINLDAKSTPEVAWEDDFEGVDTQERYG----IYNMDDYEFDHSWQMDG 213
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
+Y NWK+ DNY + YH H + + L SYS + + I + T+
Sbjct: 214 DY----NWKILADNY-NECYHCATTHPDIGALADLHSYSVATVKGQIIHDAAT-----TE 263
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFI 326
+ G + +PN N + +P + + + + F + D D +
Sbjct: 264 EQRANGLVVASTYYFPNVSTNISPHFFMIQRFVPHSADKSTMSYQVFRNKHSSDADFDLV 323
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
K ++ ED LC Q+ L + + +G P E+ HF
Sbjct: 324 SNIYK---RIMSEDKALCSAAQQNLNAGVFTNGELHPKYEKGPLHFQ 367
>gi|385674470|ref|ZP_10048398.1| ring hydroxylating dioxygenase subunit [Amycolatopsis sp. ATCC
39116]
Length = 385
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 164/376 (43%), Gaps = 20/376 (5%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
P +P T YTD + ALE ++F + W + L P +F + +IG
Sbjct: 13 QPGLPSSLIPTLGGITYTDETIFALEQEKIFEQMWFCAVRSADLPQPGNFRTVQIGRESV 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILA---TGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
+V R +G + AF N+CRH + L +G+ K++ F CPYH WTY LDG L+ A +T
Sbjct: 73 LVTRSRDGALRAFLNICRHRGARLCVEESGTVKRN-FQCPYHAWTYSLDGKLVAAPNLTS 131
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
+ D + E+GL P+ + W + L + +E EE VA G + + GID
Sbjct: 132 MPDIDRTEYGLKPVHLREWLGYAWLCLAEEPPSFEETVQADVAGRL--GQLDAIGNYGID 189
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ 256
L+ R Y ++ NWK+ +N+++ YH H L L D Y+ Y +
Sbjct: 190 -ELALGRRITYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAE 247
Query: 257 RCE--SGST-EGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTR 306
E SG T +G+ RLG + YA + P +N + + + P+A R
Sbjct: 248 FGEDVSGFTVDGSAGFDRLGGVDEHQDRRYYAITVRPQVFVNLVPDHVIIHRMFPMAVDR 307
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
V D+ + D + S++ +V +D CE Q + S AY G E
Sbjct: 308 TIVECDWLYAREVVDSGRDVSHSVELFHRVNQQDFDACERCQPAMSSRAYARGGVLVPSE 367
Query: 367 QTMYHFHSLLHCNLTN 382
+ FH + L
Sbjct: 368 HHIGEFHQWVERTLAG 383
>gi|293609045|ref|ZP_06691348.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375133737|ref|YP_004994387.1| dioxygenase, alpha subunit [Acinetobacter calcoaceticus PHEA-2]
gi|427425702|ref|ZP_18915786.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-136]
gi|292829618|gb|EFF87980.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121182|gb|ADY80705.1| dioxygenase, alpha subunit [Acinetobacter calcoaceticus PHEA-2]
gi|425697565|gb|EKU67237.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-136]
Length = 371
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + FV +NM + A V ++
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPEF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + + L R NWKV DNYL+ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACSVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SVTDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|294086106|ref|YP_003552866.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665681|gb|ADE40782.1| Rieske (2Fe-2S) region [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 377
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 170/377 (45%), Gaps = 39/377 (10%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N PIE+A P++ Y D E +F +W +G+ + P ++
Sbjct: 6 NVSAPIERANGLPNACYIDEQIYQHEQDTLFRNNWAAIGFGKDVASPGMVKPLSFLDIPM 65
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITG-- 138
++ R NG I+ F NVCRH IL + + CPYH W+Y LDG L K I G
Sbjct: 66 IMVRTQNGDINVFQNVCRHRGMILVDAPQQLRGPITCPYHAWSYDLDGNLRKTPHIGGPN 125
Query: 139 ---IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ ++ L + W V +N+G +A + + W ++ L
Sbjct: 126 VDTLDSVQHCDYPLNKVRSHVWNDIVFVNVGGDAP-AFTTQMAALIDRW-HEFNQPLYHG 183
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL---------DSYS 246
G DSSLS+ + CNWK+ +NY + YH+P+ H L S +L D+Y+
Sbjct: 184 GADSSLSF------DLACNWKLAVENYCEA-YHLPFIHPALNSYSRLEDHYNILDHDNYA 236
Query: 247 TSLYEKVSIQRCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGPWMDTNLVIPL 302
+ Q ++G+ T D +L SK A Y ++PN ++ G D I L
Sbjct: 237 GQGTTVYAPQVSDTGARFPTFD--KLSSKWDTGAEYVALFPNVLL---GVHKDHYFNILL 291
Query: 303 AP-----TRCKVVFDYFLDGSLKDDKAFIEQS-LKDSEQVQMEDIILCEGVQRGLESPAY 356
P T ++ Y +L DD A + + + + V EDI + EG+Q+G ++PAY
Sbjct: 292 TPDGTGHTHEQIELYYTDPLALSDDYAEMRATNTRMWQTVFAEDISVVEGMQKGRKAPAY 351
Query: 357 CSGRYAPSVEQTMYHFH 373
G+++ ++++ YHFH
Sbjct: 352 DGGKFSAVMDESTYHFH 368
>gi|448331530|ref|ZP_21520793.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Natrinema
versiforme JCM 10478]
gi|445609096|gb|ELY62905.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Natrinema
versiforme JCM 10478]
Length = 407
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 171/370 (46%), Gaps = 39/370 (10%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
EK+ P+ ++T+P +L +E +VF W G+ + +K+ +F+ IG + +V R
Sbjct: 18 EKSNALPAKYFTEPEYLEVENEKVFGEYWVYAGHANCIKESGQYFTRTIGGRQLIVVRGH 77
Query: 88 NGKIHAFHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLLKATRI------ 136
+G I AF NVC H S + T G CPYH WTY L+G L +
Sbjct: 78 DGDIKAFDNVCAHRGSKMVDDTPMTDPGDAKRIKCPYHLWTYDLEGELKSTPKSFDEAGL 137
Query: 137 -TGIKDFNVKEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE 190
++D V+EF L + V T GP + +N+ ++ + E + V+ + E
Sbjct: 138 NPDLEDEEVQEFDAEANALNDVHVDTIGPLIFVNLSEDPMPLAE-QAGVMKDRL-----E 191
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
L + + + + +ECNWKVF NY + H H+ G+ L+ +
Sbjct: 192 ALPLGEYEHATRIVSE----VECNWKVFASNYSECD-HCQANHQDWIKGISLNESELEVN 246
Query: 251 EKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTR 306
+ + E +D R+ +A + +++PNF +N YG T ++ P+ R
Sbjct: 247 DYHWV--LHYTHAEDVEDEMRIHDEHEAQFHYLWPNFTVNMYGTADGYGTYIIDPIDTDR 304
Query: 307 CKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSV 365
+++ D YF D L D++ + ++ S Q+Q ED L E GL++ A + P+
Sbjct: 305 FQLIADYYFRDSELSDEE---REFVRTSRQLQEEDFELVERQWEGLKTGALAQAQLGPN- 360
Query: 366 EQTMYHFHSL 375
E T++ FH L
Sbjct: 361 EHTVHKFHQL 370
>gi|37522269|ref|NP_925646.1| hypothetical protein glr2700 [Gloeobacter violaceus PCC 7421]
gi|35213269|dbj|BAC90641.1| glr2700 [Gloeobacter violaceus PCC 7421]
Length = 355
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 147/349 (42%), Gaps = 18/349 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +YTDP F EL V+ +WQ VG + L++ D+ + +GE V ++ G++ A
Sbjct: 15 PGRYYTDPDFYQRELKTVWRSTWQWVGRLEDLRNSGDYLTTILGEEPIFVVKNAEGELLA 74
Query: 94 FHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
HNVC H A +L G + CPYH WT+ L+G LL ++ D + L
Sbjct: 75 MHNVCPHRGARLLPEKQGSCKFLQCPYHAWTFDLEGKLLAVSQPKWFPDLDKSSVRLARA 134
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
VA+WG FV +N E E + E+LGG L + R Y
Sbjct: 135 RVASWGGFVFINPDPEGESLAEYLAGY--PEYLGGWPHRW------EELREVARTVYEEP 186
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL----QLDSYSTSLYEKVSIQRCESGSTEGTDD 268
NWK +NY++ YH AH G L + + T + + + +
Sbjct: 187 INWKFIVENYVE-DYHFATAHAGSLVPLFDVQNIRTTPTGRHIPILVPYTPEPPADPAFL 245
Query: 269 THRLGSKAIY-AFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
H Y FI+PN MIN V L P R ++ + + ++
Sbjct: 246 KHWEADVPSYQGFIFPNMMINTGKNGCSVWQVTALGPERSRLETVTYQTPAQYAADPYVP 305
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+S +QV ED +C +QRG+ S AY A E + HFH +L
Sbjct: 306 ESW---QQVMEEDFSVCRLLQRGIGSRAYQVRALAGEHELGVAHFHQVL 351
>gi|424745924|ref|ZP_18174183.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-141]
gi|422941743|gb|EKU36808.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-141]
Length = 371
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 162/359 (45%), Gaps = 37/359 (10%)
Query: 13 AAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD 70
A +KL +F NP + A T P +YT E +F +SW V + +L P D
Sbjct: 3 AVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQPND 58
Query: 71 FFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGT 129
+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LDG+
Sbjct: 59 YITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLDGS 118
Query: 130 LLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS 189
L A ++ F+ + +VPL+V + FV +NM + A V ++ +
Sbjct: 119 LALARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENAT--------CVEDQLPEFAE 170
Query: 190 EILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSL 249
+ + L R NWKV DNYL+ YH AH G A +Q+D Y +
Sbjct: 171 RLNQACSVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWHTT 229
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
++ ++Q G ++ + +L + P F + + W T +P V
Sbjct: 230 HQNWTLQY---GFARSSEKSFKLDP----SITDPEF--HGFWTWPCTMFNVPPGSNFMTV 280
Query: 310 VFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPAY 356
++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S Y
Sbjct: 281 IYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRGY 339
>gi|299771320|ref|YP_003733346.1| Rieske [2Fe-2S] domain-containing protein [Acinetobacter oleivorans
DR1]
gi|298701408|gb|ADI91973.1| Rieske [2Fe-2S] domain protein [Acinetobacter oleivorans DR1]
Length = 371
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + +L P
Sbjct: 1 MSAVEKLPEDFCANPDV----AWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQP 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ V+ R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + F+ +NM + A V ++
Sbjct: 117 GSLALARNCDHVESFDKENSSMVPLKVEEYAGFIFINMDENAT--------CVEDQLPEF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ + + L R NWKV DNYL+ YH AH G A +Q+D Y
Sbjct: 169 AERLNQACSVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GFARSSEKSFKLDP----SITDPEF--HGFWTWPCTMFNVPPGSNFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPVDAETTLQHYDIYFTNEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|416966027|ref|ZP_11936729.1| ring-hydroxylating dioxygenase large subunit [Burkholderia sp.
TJI49]
gi|325521471|gb|EGD00290.1| ring-hydroxylating dioxygenase large subunit [Burkholderia sp.
TJI49]
Length = 382
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 163/377 (43%), Gaps = 38/377 (10%)
Query: 23 PQIPI------EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
PQ+P E A T P ++YT E ++F +W V + +L D + + +
Sbjct: 15 PQLPADFCSNPELAWTIPKTYYTSQEVFKAEEEKIFADTWICVAHRSELADANQYVTREV 74
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATR 135
++ R + + AF+NVC H L GSGK K+ CPYH WT+ LDG L A
Sbjct: 75 IGENVLIVRGKDKVLRAFYNVCPHRGHQLLEGSGKAKNVITCPYHAWTFKLDGALAHANN 134
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ F+ + LVP++V + FV +N+ A V + G + + +
Sbjct: 135 CDHVMAFDKENSSLVPVKVEEYAGFVFINLNPNA--------GTVEAQLPGMEARLRAAC 186
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
+ L R NWK DNYL+ YH AH G + +++D Y+ +L+ ++
Sbjct: 187 PVIDDLKLAARFVSETPANWKSIVDNYLE-CYHCGPAHPGFSDSVKIDQYTHTLHGNWTL 245
Query: 256 QRCESGSTEGTDDTHRLGSKAIYA-----FIYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
Q G E ++ + +L A + +P M N P D VI P +V
Sbjct: 246 Q---FGYAESSERSFKLDPSIKDASFQGFWAWPCTMFN-VPPGADFMTVIYEFPVNAEVT 301
Query: 311 FD----YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-------CSG 359
YFL+ L D + + + ++ + ED+ L E VQ+GL+S Y
Sbjct: 302 LQHYDIYFLNEELTDYQKNLIEWYRNV--FRPEDLRLVESVQKGLKSRGYRGQGRIMVDQ 359
Query: 360 RYAPSVEQTMYHFHSLL 376
R + E + HFH LL
Sbjct: 360 RRSGVSEHGIAHFHHLL 376
>gi|402078311|gb|EJT73576.1| choline monooxygenase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 430
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 24/367 (6%)
Query: 23 PQIPIEKALTP--PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
P P EK+ P+ WYT +LE +F R W + + ++ +P D+ + +
Sbjct: 16 PPSPTEKSAVRALPAEWYTSQDMYSLERRAIFSRKWLLTTHKARIPNPGDWVRYDVAGYQ 75
Query: 81 FVVCRD-DNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
F++ RD +G IHA HNVCRH A ++ G F C YHGW+YGL G L KA
Sbjct: 76 FIIVRDRKDGTIHAMHNVCRHRAFPVVTKDEGNSYVFSCKYHGWSYGLKGNLAKAPGYQD 135
Query: 139 IKDFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI 197
+ F+ + L P+ V FV +NM + + ++ G E
Sbjct: 136 LPGFDRAKNSLFPIHVHLDRNGFVWVNMDAGETPE------IAWSDDFAGIDEQERFQHY 189
Query: 198 DSSLSYLCRREYTIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
+ Y+ ++ +E NWK+ DNY + YH P +H + S L+SY + EK +
Sbjct: 190 NFE-DYVFDHQWDMEGDWNWKILADNY-NECYHCPTSHPDIPSIADLNSYFVNT-EKAFV 246
Query: 256 QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL 315
Q + E R+ + + +PN +N + +P AP + ++ ++ +
Sbjct: 247 QHFGEPTPEQIAQGFRVAA----TYYWPNASMNVSPHFFMIQRFVPFAPNKSQMRYEVYR 302
Query: 316 DGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ + D D I + K ++ ED LC QR +++ + +G P +E+ +F
Sbjct: 303 NKNSSDEDFKTISEMYK---RIMSEDKYLCANAQRNIDAGVFVNGELHPDLEKGPLYFQK 359
Query: 375 LLHCNLT 381
++ +T
Sbjct: 360 VVREVVT 366
>gi|167033200|ref|YP_001668431.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida GB-1]
gi|166859688|gb|ABY98095.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida GB-1]
Length = 373
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 24/362 (6%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
++A T P+++YT + E +F RSW VG+ ++ D + + + +V R
Sbjct: 16 DEAFTIPANFYTKAAVFEHEKEAIFARSWICVGHRSEVADNNAYITREVIGESIIVVRGR 75
Query: 88 NGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ + AF+NVC H L +GSGK K+ CPYH WT+ LDG L A + +F+ +
Sbjct: 76 DSVLRAFYNVCPHRGHQLLSGSGKAKNVITCPYHAWTFKLDGELAHARNCDNVVNFDKEN 135
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
LV L V + F+ +NM ++D+ V ++ G + + + L R
Sbjct: 136 STLVQLRVEEYAGFIFINM--------DMDAGSVEDQLPGLQTRMREACAVIDDLHLAAR 187
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
NWK DNYL+ YH AH G + + + YS +++ ++Q + +E +
Sbjct: 188 FVSDTPANWKSIVDNYLE-CYHCAPAHPGFSDSVDVGQYSHTMHGNWTLQYGLAKPSEQS 246
Query: 267 ---DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
D+ + S A + + +P M N P + VI P + ++ L D
Sbjct: 247 FKFDENVKDPSFAGF-WAWPCTMFN-VPPGANFMTVIYEFPVDAETTLQHYDIYFLNKDI 304
Query: 324 AFIEQSLKD--SEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQT------MYHFHS 374
+Q L D E + ED+ L E VQ+GL+S Y GR E++ + HFH+
Sbjct: 305 TEEQQKLIDWYREVFRPEDLRLVESVQKGLKSRGYRGQGRIMADRERSGMSEHGIAHFHN 364
Query: 375 LL 376
L+
Sbjct: 365 LI 366
>gi|148553462|ref|YP_001261044.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148498652|gb|ABQ66906.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 432
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 163/368 (44%), Gaps = 42/368 (11%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
++V E I + P Y DP ALE R+F RSWQ+V + + + D+ S
Sbjct: 40 RVVKEVGSAIDPDANFGLPGWIYHDPEIFALEQERIFRRSWQLVCHLNDIPARGDWQSLE 99
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKAT 134
IG +V R ++G++ A N CRH AS L G+ G +CPYH WTY LDG L +
Sbjct: 100 IGHEAIIVVRGEDGEVRALSNTCRHRASRLVDGAEGCARKLICPYHAWTYELDGRL---S 156
Query: 135 RITGIKD---FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI 191
+ G +D F++ ++GL V W F+ +N+ E + VA E+
Sbjct: 157 GVPGKRDYPAFDMADYGLHSFPVEVWRGFIFVNI--------EGEGPSVAEMMAPYEEEV 208
Query: 192 LSINGID-SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS------GLQLDS 244
+ +L + R T+ NWK DNY D G H+P AH GL G++ +
Sbjct: 209 APYRFEEMKALGRVVMRPRTV--NWKNIADNYSD-GLHIPVAHPGLKRLFGPGYGIEAKA 265
Query: 245 YSTSLYEKVSIQRCESGSTEG------------TDDTHRLGSKAIYAFIYPNFMINRYGP 292
++ ++ + ++ S+E D RL IY ++PN + Y
Sbjct: 266 WADKMWGPL-LEGVPGSSSEALYRKYLPQVAHLPADRQRLW---IYFKLWPNTAFDIYPD 321
Query: 293 WMDTNLVIPLAPTRCKVV-FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGL 351
+D IP++PT + Y L ++ KA + + + V ED L VQ G+
Sbjct: 322 QIDFMQFIPVSPTETMIREIAYVLPDERREMKAARYLNWRINRMVNAEDTKLVARVQDGM 381
Query: 352 ESPAYCSG 359
+ +Y G
Sbjct: 382 ATQSYTQG 389
>gi|419249260|ref|ZP_13791849.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9E]
gi|419278177|ref|ZP_13820431.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10E]
gi|419375672|ref|ZP_13916701.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC14B]
gi|419380990|ref|ZP_13921946.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC14C]
gi|419386262|ref|ZP_13927143.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC14D]
gi|378096633|gb|EHW58403.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC9E]
gi|378129176|gb|EHW90548.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC10E]
gi|378220596|gb|EHX80848.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC14B]
gi|378228979|gb|EHX89129.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC14C]
gi|378232085|gb|EHX92187.1| 2Fe-2S cluster-containing protein [Escherichia coli DEC14D]
Length = 374
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YT + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTAQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|317156651|ref|XP_003190749.1| Rieske 2Fe-2S family protein [Aspergillus oryzae RIB40]
Length = 406
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 160/372 (43%), Gaps = 44/372 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P +AL P+SWY LE +F + W +V + +L P DF +C
Sbjct: 19 PEARAL--PASWYHSSPLYELERRAIFSKRWLLVTHRSRLTKPGDFIRYEEAGFPIFLCL 76
Query: 86 DDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D G + FHNVCRH A ++ + SG + C YHGW+YGL+G L KA R G+ F+
Sbjct: 77 DRQGNLRGFHNVCRHRAFPVVISDSGSANILACKYHGWSYGLNGKLAKAPRFDGVSGFDK 136
Query: 145 KEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE--ILSINGIDSSL 201
++ GL + V V +N+ +E + ++LG ++ + N +
Sbjct: 137 EDNGLFSIHVHVDQRGLVWVNLDA-----KETPTTPWNEDFLGADTQGRLQDFNMTEYKF 191
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
+ + NWK DNY + YH AH G+A+ L +Y
Sbjct: 192 DHAW--DMVGNYNWKTLVDNY-NECYHCGVAHPGIAAISDLTTYDV-------------- 234
Query: 262 STEGTDDTHRLGSKAIY--------AFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
T G H + K Y F +PN + + V+P + T + ++
Sbjct: 235 QTHGGQIQHYVKDKPGYDSDIKVAPTFFFPNASVTMTSHYFYIMRVVPTSATTTSMQYEV 294
Query: 314 F--LDGSLKDDKAFIEQSLKD-SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
F D S DKAF E L D +QV+ ED LC G Q+ L + Y +G P E+ +
Sbjct: 295 FRHRDAS---DKAFKE--LDDFFKQVENEDKNLCNGAQKNLNAGVYVNGELQPFNEKGVL 349
Query: 371 HFHSLLHCNLTN 382
+F L+ +L +
Sbjct: 350 YFQKLVKQSLVS 361
>gi|417308265|ref|ZP_12095118.1| dioxygenase subunit alpha yeaW [Escherichia coli PCN033]
gi|338770115|gb|EGP24882.1| dioxygenase subunit alpha yeaW [Escherichia coli PCN033]
Length = 374
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+ L+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKWLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|52842431|ref|YP_096230.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378778119|ref|YP_005186557.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|52629542|gb|AAU28283.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364508934|gb|AEW52458.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 363
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 157/368 (42%), Gaps = 29/368 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVEF 81
I KA T S +YT + + ++F ++WQ T++L P G + E
Sbjct: 12 ITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGYLEE-PL 70
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+ +D+ G I NVC H IL C YHG + G LL KD
Sbjct: 71 LFAKDELGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKD 130
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F L + PF+ ++ E WL L
Sbjct: 131 FPSNNDNLSQISTGILEPFLFASLSPVVPFHEVFAEIKERLFWLPMEKMRLDKEKC---- 186
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
++Y ++ +W ++C+NYL+ H+P+ H L + ++Y+T L+ ++Q +
Sbjct: 187 -----KDYVVKSHWALYCENYLEA-LHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS 240
Query: 262 STEGTDDTHRLGS------KAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDYF 314
E + D + A Y +I+PN M+N Y PW N+V PL+P +V F F
Sbjct: 241 PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFY-PWGCSVNVVKPLSPELTQVSFLSF 299
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ D+ F + + +QV+ ED + E VQRG++S Y GR++P+ EQ +HF
Sbjct: 300 V----LDESKFGKGAGGALDQVEQEDERVVESVQRGIKSRYYDIGRFSPTKEQGTHHFQR 355
Query: 375 LLHCNLTN 382
LL C N
Sbjct: 356 LL-CEFLN 362
>gi|398953188|ref|ZP_10675187.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM33]
gi|398154097|gb|EJM42579.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM33]
Length = 421
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 173/411 (42%), Gaps = 61/411 (14%)
Query: 5 SCYSENLVAAQKLVYEFNPQIPIEKALTP-------PSSWYTDPSFLALELHRVFYRSWQ 57
SC E + P +E L P + +YT+ + LE V R+W
Sbjct: 18 SCQQEKTIMTSTTATRLIPTHTLETVLAPIHEAHGLTNEFYTEQRYFDLERDHVLGRNWA 77
Query: 58 VVGYTDQLK-----DPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKK 112
VG+ L P DF + ++ R+ G + FHNVC H L +G+
Sbjct: 78 CVGFASDLPGNSYVKPVDFMG-----LPLLLMRNREGLVQVFHNVCSHRGVKLVQQAGEV 132
Query: 113 SWFV-CPYHGWTYGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMG 166
+ CPYH WTY L+G L + GI KD F ++ GL L A W V +N+
Sbjct: 133 QGVIRCPYHSWTYDLNGGLKGTPHVGGINQHKDERFACEKHGLKALRSAIWMDMVFINLS 192
Query: 167 KEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE-------YTIECNWKVFC 219
+A ++ + + W ++ L +G+D L RRE + CNWK+
Sbjct: 193 ADAPDLQDQLAPLT-ERW----TQFLGTDGMD-----LLRREPNSGAVSIEVNCNWKLAV 242
Query: 220 DNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH--------- 270
+NY + YH+P+ H L S +L+ + ++++ + Q + + TH
Sbjct: 243 ENYCEA-YHLPWVHPSLNSYSRLEDHYNIIFDQFAGQGSHAYNLSDVAGTHLPMFPSWPR 301
Query: 271 -RLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP------TRCKVVFDYFLDGSLKDDK 323
RL + AF +PN ++ ++ P+AP R V D LD + +
Sbjct: 302 DRLRTAEYVAF-FPNVLLGIQADHAFAMMLEPIAPGKTVEHLRLFYVGDEALDDRFEAAR 360
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ QS + V EDI EG+Q+G SP Y G ++P ++ + FH
Sbjct: 361 DAVMQSWR---VVFAEDIASVEGMQKGRHSPGYGGGAFSPEMDLPTHFFHQ 408
>gi|83769558|dbj|BAE59693.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 355
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 159/352 (45%), Gaps = 27/352 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P KAL PSSWY + ALE +F + W VV + + D+ + + + +
Sbjct: 20 PQTKAL--PSSWYRSEALYALERRAIFSKKWMVVTHRTRFTKTGDYVQLNVAGYGYFIIK 77
Query: 86 DDNGKIHAFHNVCRHHA--SILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
D G I AFHNVCRH A I + G SG + C YHGW+YGLDG L KA R ++ F
Sbjct: 78 DRTGTIRAFHNVCRHRAYPVIQSEGESGTANIISCKYHGWSYGLDGKLAKAPRYQDVEGF 137
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSL 201
++ GL P+ V + ++G V+ E D V+ E G + + G D S
Sbjct: 138 EKEKMGLYPIHVH------IDHLGFVWVNLEAGDRPSVSWEEDFEGVDQQPRLQGFDLS- 190
Query: 202 SYLCRREYTI--ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
Y +++ + NWK DNY + YH P H G+ + L Y + IQ
Sbjct: 191 QYHFDHTWSMMGDYNWKTLADNY-NECYHCPTGHPGVNAISDLSKYYVET-KAGHIQHFN 248
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD-YFLDGS 318
+ DT LG F +PN I + +P++ T+ ++ +D Y + +
Sbjct: 249 ADK----QDTPGLG--IFSTFYFPNASITVSPSFWYMMRCLPVSATQTRMEYDVYRHNNA 302
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
+D +I++ K QV ED LC Q+ L + + +G P E+ +
Sbjct: 303 SNEDFTYIDEFFK---QVLREDKDLCNAAQKNLNAGVFVNGELHPRAEKVRF 351
>gi|170019853|ref|YP_001724807.1| Rieske (2Fe-2S) domain-containing protein [Escherichia coli ATCC
8739]
gi|169754781|gb|ACA77480.1| Rieske (2Fe-2S) domain protein [Escherichia coli ATCC 8739]
Length = 374
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ C YH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCTYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 361 IAHFHNLL 368
>gi|255720591|ref|XP_002545230.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135719|gb|EER35272.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 429
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 35/367 (9%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD-NGK 90
T P+SW++ P+ L LE +F+++W + + K D+++ I + F + + +G
Sbjct: 26 TLPASWFSSPAILELEKRAIFHKTWNYCTHASRFKSAGDYYTFNITGINFFIIKSKTDGT 85
Query: 91 IHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
+ AFHNVCRH A ++ G + C YHGW Y DG L KA ++ F ++E GL
Sbjct: 86 LKAFHNVCRHRAYPVIRKDKGSSTMLGCKYHGWAYNTDGELTKARDYDQVEGFKMEENGL 145
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANE-WLGGSSEILSINGIDSSLSYLCRRE 208
+P+ ++ + + +SN + E W G +E L+ D Y E
Sbjct: 146 LPINT---------HITPQGLVFVSFNSNPIPFETWYSGLTEELNAFDFD-DYEYHMSYE 195
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST---SLYEKVSIQRCESGSTEG 265
E NWK D Y + +H AH GL + +L++Y + Y + + ++ E
Sbjct: 196 LDGEFNWKTLMDGY-NECFHCYTAHPGLKAAFKLNTYKVVPKTHYLRHFAEIVQNEEKEE 254
Query: 266 TDDTHRLGSK----------------AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ GSK ++ + PN IN Y P + V+P+ TR +
Sbjct: 255 KEKKSWFGSKKEEKPKAKSNKAGTNDGLWLQVSPNTGINCYSPAWYSIRVLPITSTRTIL 314
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
+D + L+D A ++ + +QV++ED LC Q+ L Y +G P E +
Sbjct: 315 QYDIYTKKGLED--AGKKEFVDFLQQVELEDYDLCVLTQKNLNQGIYKTGVLHPGHENGV 372
Query: 370 YHFHSLL 376
++ L+
Sbjct: 373 LYYQGLV 379
>gi|307152627|ref|YP_003888011.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306982855|gb|ADN14736.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 352
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 32/357 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y DP LE+ ++ SWQ V L D+ + GE +V NG++ A
Sbjct: 6 PGYYYYDPKIFELEMKTIWCNSWQWVARVSDLPKKGDYLTYEAGEQSIIVINQGNGQLIA 65
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HNVC H + L G G VCPYH W Y L+G L + +D + + P++
Sbjct: 66 MHNVCPHRGASLVQGKGNCHQLVCPYHAWVYNLEGQLKNIPQANLFEDLDFSTIQIQPVQ 125
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEIL-SINGIDSSLSYLCRREYTIE 212
+ TWG F+ +N+ +S+ +++L G S+ L N L + R YT
Sbjct: 126 LDTWGGFIFVNLA---------NSSESLSDYLAGFSDYLKQYNHPWEDLIEVARWSYTEA 176
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRL 272
NWK +NY++ YH H + T+ + + E D L
Sbjct: 177 INWKFIVENYVE-DYHFNTLHPKSLDLFDFKNVYTTTSGRHCLIEVPYTQEEFADLKLSL 235
Query: 273 ----GSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP--TRCKVVFDYFLDGSLKDDKAFI 326
+ + +I+PN M+N + V+P++P TR +++ + K +
Sbjct: 236 PWEPQNFSYQGYIFPNLMVNTDNHHVSLWRVVPISPISTRLEII--------IYQTKMQL 287
Query: 327 EQSLKDSE-------QVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
S + SE QV ED +C +Q+ S AY A E + HF+ +L
Sbjct: 288 SNSFRASEKWKIIFDQVLQEDFAICRNLQKNAHSMAYQVSHLARMRELGIAHFYKVL 344
>gi|99081899|ref|YP_614053.1| Rieske (2Fe-2S) protein [Ruegeria sp. TM1040]
gi|99038179|gb|ABF64791.1| Rieske (2Fe-2S) region [Ruegeria sp. TM1040]
Length = 384
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 165/372 (44%), Gaps = 39/372 (10%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ +A P++ Y DP A E V + +W VG+ + +P D V ++ RD
Sbjct: 14 VNRANGLPNAHYIDPVVFAEERAAVLFANWSGVGFGKDIPNPGDAKPVDFLGVPLLLVRD 73
Query: 87 DNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI-----K 140
+G +H + N CRH IL + + CPYH W Y L G L A + G+
Sbjct: 74 HDGGVHVYQNTCRHRGMILVEEAKNIRGTIRCPYHSWCYSLKGKLRAAPHVGGVGQNTHA 133
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
D + E LV W + +N+ +A EEV ++++ W L G +SS
Sbjct: 134 DVKMDELSLVSFRAHVWQDVIFVNIDGKAAPFEEVHADLL-QRWQE-FDRPLHHGGPESS 191
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQ--- 256
L + ++ NWK+ +NY + YH+P+ H GL S +L D Y+ K S Q
Sbjct: 192 L------KLEVKTNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYNIEKQGKYSGQGTL 244
Query: 257 --RCESGST-------EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
R G+ EG D G + Y +YPN ++ G D + I L P C
Sbjct: 245 VYRQLRGAEDEVFPDFEGLSDKWETGGE--YVALYPNVLL---GVQRDHSFAIVLEPKGC 299
Query: 308 KVVFD----YFLDGSLKDDK--AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ + Y+ S + + Q+ + + V ED+ + EG+Q+G P + GR+
Sbjct: 300 EETVEHIELYYAKSSAETPELDPLRHQNAQLWKTVFEEDVFVVEGMQKGRHGPMFDGGRF 359
Query: 362 APSVEQTMYHFH 373
+P+++ ++FH
Sbjct: 360 SPAMDGPTHNFH 371
>gi|348169572|ref|ZP_08876466.1| ring hydroxylating dioxygenase subunit [Saccharopolyspora spinosa
NRRL 18395]
Length = 373
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 158/364 (43%), Gaps = 20/364 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P +YTDP +LE R+F W L + F + ++ ++ R +G +
Sbjct: 13 TLPGHYYTDPELFSLEQDRIFGAMWFCAVRAADLAEAGQFRTVQVARESVLITRGRDGAL 72
Query: 92 HAFHNVCRHHASILA---TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF N+CRH + L TG K++ F CPYH WTYG DG L+ A +T + D + +FG
Sbjct: 73 RAFLNICRHRGARLCVEDTGQVKRA-FQCPYHAWTYGTDGKLVAAPNLTSMPDVDRTQFG 131
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L+P+ + W + + + E E+ V+ LGG +++ G+D L+ R
Sbjct: 132 LIPVALREWLGYAWVCLADEPPSFEDTVLEAVSGR-LGG-EDVIGGYGVD-GLALGRRIS 188
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ---RCESGST 263
Y + NWK+ +N+++ YH H L L D Y+ Y + E +
Sbjct: 189 YDVRANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGSDVEGFTV 247
Query: 264 EGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
+G+ RL + YA + P +N + + + PLA R V D+
Sbjct: 248 DGSGGFERLAGVGDEHDRRYYAITVRPQVFLNLVPDHVIVHRMFPLAADRTLVECDWLYA 307
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ + + +S++ +V +D CE Q + S AY G E + FH L
Sbjct: 308 PEVVEAGHDVSRSVELFHRVNQQDFDACERCQPAMSSRAYADGGVLVPSEHHIGEFHDWL 367
Query: 377 HCNL 380
L
Sbjct: 368 RSRL 371
>gi|115401112|ref|XP_001216144.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190085|gb|EAU31785.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 432
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 149/345 (43%), Gaps = 21/345 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWYT LE +F + W + + +L + D+ I F++ +D G I+A
Sbjct: 28 PASWYTSLEMFELEKRAIFSKKWLLTTHKIRLPNAGDWVRYDIAGFPFILVKDRQGNINA 87
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ G F C YHGW+YGL+G L KA ++ F+ + GL+P+
Sbjct: 88 FHNVCRHRAFPVVTEEKGTSRIFSCKYHGWSYGLNGKLAKAPGYQDLRGFDKSKNGLLPI 147
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYT 210
V F+ +NM + Q E V + GG + +D + E
Sbjct: 148 HVHVDDSGFIWVNM--DGAEQPE----VAWEDEFGGIDHLERHASVDWEQYDFDHTWEME 201
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
E NWK+ DNY + + P A + S L Y+ E IQ ES T
Sbjct: 202 GEYNWKILADNYNE---YCPTAQPDIPSIADLKGYAVETREGGDIQFAESIPEHITK--- 255
Query: 271 RLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFIEQS 329
G K + +PN + +P +PT+C + ++ + + + D D I Q
Sbjct: 256 --GLKTASTYYFPNVSMTMTPHLFFIQRAVPTSPTKCTMRYEVYRNKTSSDEDFELINQM 313
Query: 330 LKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
K ++ E+ LC+ Q L + G P +E+ +F +
Sbjct: 314 YK---RIMTEEKSLCDQTQETLNNGVSIDGELHPEMEKGSLYFQT 355
>gi|387888727|ref|YP_006319025.1| putative dioxygenase subunit alpha YeaW [Escherichia blattae DSM
4481]
gi|414592792|ref|ZP_11442441.1| putative dioxygenase alpha subunit YeaW [Escherichia blattae NBRC
105725]
gi|386923560|gb|AFJ46514.1| putative dioxygenase subunit alpha YeaW [Escherichia blattae DSM
4481]
gi|403196273|dbj|GAB80093.1| putative dioxygenase alpha subunit YeaW [Escherichia blattae NBRC
105725]
Length = 387
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 158/361 (43%), Gaps = 25/361 (6%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
A T P+ +YT E R+F RSW +G+ ++ +P + + + +V R +
Sbjct: 27 NAWTIPARFYTSAQVFEQEKARIFARSWLCIGHASEVAEPNAYITREVIGENILVVRGRD 86
Query: 89 GKIHAFHNVCRHHASILATGSG-KKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H L +G G ++ CPYH W + LDG L A + F+
Sbjct: 87 RVLRAFYNVCPHRGHQLLSGDGTARNVITCPYHAWAFKLDGELAHARNCENVAGFDKNAA 146
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
LV L+V + F+ +NM + +++ V + G S++L+ L R
Sbjct: 147 SLVALKVEEYAGFIFINM--------DPNADGVEQQLPGLQSKLLAARPNAPELKLAARF 198
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK DNYL+ YH AH G A +Q+D Y +L+ ++Q + +E +
Sbjct: 199 VTRTPANWKNIVDNYLE-CYHCGPAHPGFADSVQVDRYWHTLHGNWTLQFGYARPSEKSF 257
Query: 268 DTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLKDD 322
A + F ++P M N P D VI P YF + L ++
Sbjct: 258 KFEAREDAAFHGFWLWPCTMFN-VTPMPDMMTVIYEFPADADTTLQHYDIYFANEVLTEE 316
Query: 323 KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSV------EQTMYHFHSL 375
+ + + +D + ED+ L E VQ+GL+S Y GR E + HFH+L
Sbjct: 317 QEKLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADASGSGISEHGIAHFHNL 374
Query: 376 L 376
+
Sbjct: 375 V 375
>gi|119485278|ref|XP_001262171.1| Rieske [2Fe-2S] domain protein [Neosartorya fischeri NRRL 181]
gi|119410327|gb|EAW20274.1| Rieske [2Fe-2S] domain protein [Neosartorya fischeri NRRL 181]
Length = 415
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 151/346 (43%), Gaps = 17/346 (4%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PSSWYT LE +F R W + + +L +P D+ + +FV+ +D G I+A
Sbjct: 26 PSSWYTSQEMFELERRAIFSRKWLLTTHKLRLPNPGDWLRYEVSGFQFVIVKDREGNINA 85
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ G F C YHGW+YGL+G L KA + F+ + GL+P+
Sbjct: 86 FHNVCRHRAFPVVTEEKGTSRIFACKYHGWSYGLNGKLAKAPGYQELDGFDKSKNGLLPI 145
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
V F+ +N+ + + + + + L + ++ E
Sbjct: 146 HVHIDANGFIWVNLDAGEIPEVAWEDDFKGMDLLPRYEHVKW-----DEYTFDHTWEQEG 200
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
+ NWK+ DNY + YH H + S L +YS + I S +
Sbjct: 201 DYNWKILADNY-NECYHCATTHPDIPSIADLSAYSVETRDGGIIHDGRSKPEQVA----- 254
Query: 272 LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFIEQSL 330
G + +PN I + +PL+PTR + ++ + + + D D I Q
Sbjct: 255 AGLNPASTYFFPNASITVSPHFFFMQRFVPLSPTRSIMKYEVYRNKNSSDEDFETINQIY 314
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
K ++ ED LC+ Q+ L + + +G P +E+ +F ++
Sbjct: 315 K---RIMSEDKYLCDLTQKNLNAGVFVNGELHPEMEKGPLYFQKVV 357
>gi|433053305|ref|ZP_20240500.1| betaine/carnitine/choline transporter (BCCT) family transporter
[Escherichia coli KTE122]
gi|431571701|gb|ELI44571.1| betaine/carnitine/choline transporter (BCCT) family transporter
[Escherichia coli KTE122]
Length = 767
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 410 NPQ----EAWTIPARFYTDQNAFEHEKESVFAKSWICVAHSSELANANDYVTREIIGESI 465
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 466 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 525
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A E+ + G +++L
Sbjct: 526 NFDSDKAQLVPVRLEEYAGFVFINMDPNATSVED--------QLPGLGAKVLEACPEVHD 577
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 578 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 636
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 637 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 695
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQT 368
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 696 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG 753
Query: 369 MYHFHSLL 376
+ HFH+LL
Sbjct: 754 IAHFHNLL 761
>gi|429858930|gb|ELA33731.1| rieske 2fe-2s family protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 413
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 20/354 (5%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E + + P+SWY P LE + + W +V ++ + K D+ S + F + +D
Sbjct: 17 EPSRSLPASWYRSPELHQLERRAIISKKWILVTHSLRFKQAGDYVSFNYADFPFFLIQDR 76
Query: 88 NGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G I+ FHNVCRH A ++ +GK S C YHGW+YG G L KA R ++ F+ +
Sbjct: 77 EGNINGFHNVCRHRAYPVIENKTGKASILSCKYHGWSYGFKGNLAKAPRFDTVRGFDKNQ 136
Query: 147 FGLVPLEVAT-WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
GL+P+ V F+ +N+ + + +V + GG + + D + SY
Sbjct: 137 HGLLPIHVRIDPAGFIWVNL-------QAGEPDVKWEDEFGGVYQKPRMQNFDFAGSYNY 189
Query: 206 RR--EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST 263
E ++ NWK +NY + YH P +H +A L Y +
Sbjct: 190 DHVWEMELDANWKTVIENY-NECYHCPTSHPLIAGVSDLTKYKVEPSGGCLEHEIINKKA 248
Query: 264 EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
+ +D R ++I F +P+ + + +IP++ T+ ++ + + + D++
Sbjct: 249 QEEEDEFR---RSI-TFFFPSTSVTITSNFFYIQRMIPVSATKTRIENEVYRHHNAGDEE 304
Query: 324 -AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
A I K QV ED LC G Q L + + +G P E+ HF + L
Sbjct: 305 FAAINAFYK---QVLEEDKQLCIGAQENLSAGVFINGELHPEKEKGPIHFQNTL 355
>gi|148359759|ref|YP_001250966.1| choline monooxygenase [Legionella pneumophila str. Corby]
gi|296107804|ref|YP_003619505.1| choline monooxygenase [Legionella pneumophila 2300/99 Alcoy]
gi|148281532|gb|ABQ55620.1| choline monooxygenase [Legionella pneumophila str. Corby]
gi|295649706|gb|ADG25553.1| choline monooxygenase [Legionella pneumophila 2300/99 Alcoy]
Length = 361
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 157/368 (42%), Gaps = 29/368 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVEF 81
I KA T S +YT + + ++F ++WQ T++L P G + E
Sbjct: 10 ITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEE-PL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+ +D++G I NVC H IL C YHG + G LL KD
Sbjct: 69 LFTKDESGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKD 128
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F L + PF+ ++ E WL L
Sbjct: 129 FPSSNDNLSQISTDILEPFLFASLSPIVPFHEVFAEIKERLFWLPMEKMRLDKERC---- 184
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
++Y ++ +W ++C+NYL+ H+P+ H L + ++Y+T L+ ++Q +
Sbjct: 185 -----KDYVVKSHWALYCENYLEA-LHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAN 238
Query: 262 STEGTDDTHRLGS------KAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDYF 314
E + D + A Y +I+PN M+N Y PW N+V PL+P +V F F
Sbjct: 239 PEEASFDLPKGAQDYGKQVAAYYFWIFPNTMLNFY-PWGCSVNVVKPLSPELTQVSFLSF 297
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ D+ + + +QV+ ED + E VQRG++S Y GR++P+ EQ +HF
Sbjct: 298 V----LDESKLGKGAGGALDQVEQEDERVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQR 353
Query: 375 LLHCNLTN 382
LL C N
Sbjct: 354 LL-CEFLN 360
>gi|428781599|ref|YP_007173385.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
gi|428695878|gb|AFZ52028.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
Length = 364
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 40/363 (11%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+S YTDP+ L LE ++F R+W +G DQL D + F + ++ + I+A
Sbjct: 19 PASLYTDPNLLPLETKQIFRRTWLYMGDADQLFDRNNIFVTEVANTSILLIKTQENSINA 78
Query: 94 FHNVCRHHASILATGSGKKS-W-FVCPYHGWTYGLDGTLL-KATRITGIKDFNVKEFGLV 150
++NVC H AS+L SG+ S W VCPYH W Y L+G L+ + + F ++++ L
Sbjct: 79 YYNVCPHRASLLCPESGRHSDWKIVCPYHAWVYDLEGKLIGTPAKDRFPETFALEDYPLK 138
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREY 209
+ W FV + + A E +LG + +I G L ++ Y
Sbjct: 139 SIRCQQWEKFVFICFDETAPSLE---------AFLGEIPK--TIQGYRQPETKQLFQQNY 187
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQRCESGSTEGTD 267
+ CNWKV+ DN L YHVP HK + +Q + +Y V++ + +TE
Sbjct: 188 KVNCNWKVYHDNTL-CDYHVPIVHKYTLNKIQGSVRNYQHQFNRYVNL--LYTPTTEQWQ 244
Query: 268 DTHRL-----GSKAIYAF----IYPNFMI----NRYGPWMDTNLVIPLAPTRCKVVFDYF 314
H + KA Y F I+PN + N W+ + PL C+V + +
Sbjct: 245 KDHPILDTIVSEKARYGFFTYGIFPNLHLLALPNGVLAWIRID---PLTTDTCEVNLEIY 301
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ + E ++ E ED+++ E VQ+G ES Y +G A +E + H
Sbjct: 302 ---GIPNFSPLAETLREEFETFMKEDMVVTEMVQKGYESGGYEAG-IANQLEDRILHQQQ 357
Query: 375 LLH 377
L+
Sbjct: 358 LIR 360
>gi|284172767|ref|YP_003406149.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haloterrigena
turkmenica DSM 5511]
gi|284017527|gb|ADB63476.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haloterrigena
turkmenica DSM 5511]
Length = 377
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
EK+ P+ ++TD +E +VF + W G+ + +K+ +F+ IG+ + +V R
Sbjct: 18 EKSNALPARYFTDDDVFEMEKDKVFGQYWVYAGHANCIKESGQYFTRTIGDRQLIVVRGH 77
Query: 88 NGKIHAFHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLLKATRI------ 136
+G++ AF NVC H S + T G CPYH WTY LDG L +
Sbjct: 78 DGEVKAFDNVCAHRGSKMVEDTPMTDPGDAKRIKCPYHLWTYDLDGELKSTPKSFEEAGL 137
Query: 137 ------TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE 190
++ F+ +E L + V T GP + +N+ ++ + E + V+ + E
Sbjct: 138 NPDLEDEDVQKFDAEENALNDVHVDTIGPLIFVNLSEDPMPLAE-QAGVMKDRL-----E 191
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
L + + + + +ECNWKVF NY + H H+ G+ L+ +
Sbjct: 192 ALPLGEYEHATRIVSE----VECNWKVFASNYSECD-HCQANHQDWIKGISLNESELEVN 246
Query: 251 EKVSIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTR 306
+ + E +D R+ +A + + +PNF +N YG T ++ P+ R
Sbjct: 247 DYHWV--LHYTHAEDVEDEMRIHDEHEAQFHYFWPNFTVNMYGTADGYGTYIIDPIDTNR 304
Query: 307 CKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSV 365
+++ D YF D L +++ + ++ S Q+Q ED L E GL + A + P+
Sbjct: 305 FQLIADYYFRDSELSEEE---REFVRTSRQLQEEDFELVERQWEGLRTGALAQAQLGPN- 360
Query: 366 EQTMYHFHSL 375
E T++ FH L
Sbjct: 361 EHTVHRFHQL 370
>gi|429826570|ref|ZP_19357707.1| rieske domain protein, partial [Escherichia coli 96.0109]
gi|429255371|gb|EKY39703.1| rieske domain protein, partial [Escherichia coli 96.0109]
Length = 357
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 22/341 (6%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY 356
+ L D++ + + +D + ED+ L E VQ+GL+S Y
Sbjct: 303 NEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGY 341
>gi|358374468|dbj|GAA91060.1| rieske [2Fe-2S] domain protein [Aspergillus kawachii IFO 4308]
Length = 422
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 20/359 (5%)
Query: 23 PQIPIEKALTP-PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
P P +A+ P+SWYT LE +F R W + + +L + D+ + F
Sbjct: 15 PTTPTNEAVRALPASWYTSQEMFELERRAIFSRKWLLTTHKLRLPNTGDWLQYEVSGFNF 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ RD G I+AFHNVCRH A L T G F C YHGW+YGL+G L KA +
Sbjct: 75 VLVRDKEGNINAFHNVCRHRAFPLVTEEKGSARIFACKYHGWSYGLNGKLAKAPGYQDLD 134
Query: 141 DFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEV--DSNVVANEWLGGSSEILSINGI 197
F+ + L+P+ V F+ +N+ +A Q E+ D + + S +
Sbjct: 135 GFDKSKNSLLPIHVHLDANGFIWVNL--DAGEQPEISWDDDFKG---IDLQSRFADVKWE 189
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQR 257
D + + +E + NWK+ DNY + YH H + + L +YS + I
Sbjct: 190 DYTFDHTWEQE--GDYNWKILADNY-NECYHCATTHPDIPALADLATYSVDTKDGGIIHD 246
Query: 258 CESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
S D G + + +PN + + +PL+PTR + ++ + +
Sbjct: 247 AHSKP-----DQIAAGLRIASTYYFPNASMTVSPHFFFMQRFVPLSPTRSVMKYEVYRNK 301
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ D+ + ++ +++ ED LC+ Q+ L + + +G P +E+ +F ++
Sbjct: 302 NSSDEDFELINTM--YKRIMSEDKYLCDLTQKNLNAGVFVNGELHPKMEKGPLYFQKVV 358
>gi|237731838|ref|ZP_04562319.1| Rieske domain-containing protein [Citrobacter sp. 30_2]
gi|365107515|ref|ZP_09335842.1| putative dioxygenase subunit alpha yeaW [Citrobacter freundii
4_7_47CFAA]
gi|226907377|gb|EEH93295.1| Rieske domain-containing protein [Citrobacter sp. 30_2]
gi|363641214|gb|EHL80614.1| putative dioxygenase subunit alpha yeaW [Citrobacter freundii
4_7_47CFAA]
Length = 374
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 163/368 (44%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E +VF +SW V ++ +L P D+ + +
Sbjct: 17 NPQ----DAWTIPARFYTDHQAFEHEQEKVFAKSWICVAHSSELAKPNDYVTREVIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDNVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ L P+ + + FV +NM A EE + G + +++
Sbjct: 133 NFDSEKAHLTPVRLEEYAGFVFINMDPNAGSVEE--------QLPGLADKVIEACPDVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGVDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDAETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSV------EQT 368
+ L +++ + + ++ + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTEEQKQLIEWYRNV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADTSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|406039604|ref|ZP_11046959.1| dioxygenase, alpha subunit [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 371
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + ++
Sbjct: 1 MNAVEKLPEDFCSNPDV----AWTFPKVFYTSSQVFEREKEEIFAKSWICVAHGSEVAQA 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ +V R + + AF+NVC H L GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIIVIRGKDSVLRAFYNVCPHRGHELLNGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V +G FV +NM + A V ++
Sbjct: 117 GSLALARNCDHVESFDKQNSSMVPLKVEEYGGFVFINMDENAT--------CVEDQLPEF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ ++ + L R NWKV DNYL+ YH AH G A +Q+D Y
Sbjct: 169 AQKLNEACAVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GYARSSEKSFKLDP----SVKDPTF--SGFWTWPCTMFNVPPGANFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPMDAETTLQHYDIFFTNEELTQDQKDLIEWYRNVFRPEDLELVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|302894743|ref|XP_003046252.1| hypothetical protein NECHADRAFT_5017 [Nectria haematococca mpVI
77-13-4]
gi|256727179|gb|EEU40539.1| hypothetical protein NECHADRAFT_5017 [Nectria haematococca mpVI
77-13-4]
Length = 377
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 156/352 (44%), Gaps = 30/352 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY + LE +F R W ++ + + K D+ S F + D +G+I+A
Sbjct: 26 PASWYRSAAMYELERRAIFSRKWILLTHKLRFKKAGDYVSFTEAGFSFFLVMDRDGQINA 85
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP- 151
FHNVCRH A I+ G + C YHGW+YG G L KA R + DF+ + L+P
Sbjct: 86 FHNVCRHRAFPIVTQACGNSAILSCKYHGWSYGFKGNLAKAPRFDTVPDFDKTKHNLLPV 145
Query: 152 -LEVATWGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + G F+ +N+ GK ++ EE V + L D Y
Sbjct: 146 NLRIDAKG-FIWINLEAGKPSIAWEEDFDGVDTQDRLA---------PYDLMNDYHYDHT 195
Query: 209 YTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
+T+E NWK DNY + YH P H G+ + L +Y + IQ E T
Sbjct: 196 WTMEGDYNWKTLADNY-NECYHCPTGHPGVNAISNLAAYRVET-KGGHIQHFNQNKDE-T 252
Query: 267 DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF- 325
D T ++ S +F++PN + IP++ + + +D F + DD+ F
Sbjct: 253 DTTMQVAS----SFLFPNACFTVTPDFFYMMRCIPMSAGKTLMEYDVFRHNNT-DDENFK 307
Query: 326 -IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
I + K QV ED LC G Q+ LE + +G+ P E+ F +
Sbjct: 308 RINEFFK---QVLQEDKDLCNGTQKNLEGGIFINGQLHPEKEKGPIFFQETI 356
>gi|402759422|ref|ZP_10861678.1| Rieske [2Fe-2S] domain-containing protein [Acinetobacter sp. NCTC
7422]
Length = 371
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + ++
Sbjct: 1 MNAVEKLPEDFCSNPDV----AWTFPKVFYTSSQVFEREKEEIFAKSWICVAHGSEVAQA 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ +V R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIIVIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V +G F+ +NM + A V ++
Sbjct: 117 GSLALARNCDHVESFDKQNSSMVPLKVEEYGGFIFINMDENAT--------CVEDQLPEF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ ++ + L R NWKV DNYL+ YH AH G A +Q+D Y
Sbjct: 169 AQKLNEACAVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GYARSSEKSFKLDP----SVKDPTF--SGFWTWPCTMFNVPPGANFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPMDAETTLQHYDIFFTNEELTQDQKDLIEWYRNVFRPEDLELVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|398863046|ref|ZP_10618626.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
gi|398249335|gb|EJN34725.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
Length = 372
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 163/360 (45%), Gaps = 22/360 (6%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A T P+++YT + E ++F +SW +G+ ++ + + + + +V R +
Sbjct: 17 RAFTIPANFYTSAAVFEHEKEKIFAKSWICLGHRSEVAENNAYITREVIGESIIVIRGRD 76
Query: 89 GKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H L GSGK K+ CPYH WT+ LDG L ++ F+ +F
Sbjct: 77 SVLRAFYNVCPHRGHQLLEGSGKAKNVIACPYHAWTFKLDGELTHVRNCDQVEAFDKGDF 136
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
LV L V + F+ +NM + D+ V ++ G + + S G+ +L R
Sbjct: 137 SLVQLRVEEYAGFIFVNM--------DPDAGSVEDQLPGLEARMRSACGVIDNLQLAARF 188
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK DNY++ YH AH A + + Y +++ S+Q + S+E +
Sbjct: 189 VSDTPANWKSIVDNYME-CYHCGPAHPSFADSVDVGQYVHTMHGNWSLQYGIAKSSEQSF 247
Query: 268 DTHRLGSKAIYA--FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF 325
+ +A + +P M N P + VI P + ++ L D
Sbjct: 248 QVDESVTDPSFAGFWAWPCTMFN-VPPGANFMTVIYEFPVDAETTLQHYDIYFLNKDITE 306
Query: 326 IEQSLKD--SEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQT------MYHFHSLL 376
+Q L D E + ED+ L E VQ+GL+S Y GR E++ + HFH+L+
Sbjct: 307 EQQKLIDWYREVFRPEDLRLVESVQKGLKSRGYRGQGRIMVDKERSGISEHGIAHFHNLI 366
>gi|425743962|ref|ZP_18862026.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-323]
gi|425492250|gb|EKU58515.1| putative dioxygenase subunit alpha YeaW [Acinetobacter baumannii
WC-323]
Length = 371
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + ++
Sbjct: 1 MNAVEKLPEDFCSNPDV----AWTFPKVFYTSSQVFEREKEEIFAKSWICVAHGSEVAQN 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ +V R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIIVIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V +G FV +NM + A V ++
Sbjct: 117 GSLALARNCDHVESFDKQNSSMVPLKVEEYGGFVFINMDENAT--------CVEDQLPEF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ ++ + L R NWKV DNYL+ YH AH G A +Q+D Y
Sbjct: 169 AQKLNEACAVIKDLKLAARFVTETPANWKVIVDNYLE-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ ++ ++Q G ++ + +L + P F + + W T +P
Sbjct: 228 TTHQNWTLQY---GYARSSEKSFKLDP----SVKDPTF--SGFWTWPCTMFNVPPGANFM 278
Query: 308 KVVFDYFLDG--SLKD-DKAFIEQSLKDSEQ---------VQMEDIILCEGVQRGLESPA 355
V++++ +D +L+ D F + L ++ + ED+ L E VQRGL+S
Sbjct: 279 TVIYEFPMDAETTLQHYDIFFTNEELTQDQKDLIEWYRNVFRPEDLELVESVQRGLKSRG 338
Query: 356 Y 356
Y
Sbjct: 339 Y 339
>gi|351066229|gb|AEQ39095.1| Rieske 2Fe-2S family protein [Oceanimonas doudoroffii]
Length = 395
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 175/398 (43%), Gaps = 40/398 (10%)
Query: 5 SCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQ 64
S S+N++ Q++ NP I +A P++ Y + A E +V ++W +G+
Sbjct: 2 SNVSQNIIPVQQVDSVLNP---IVEASGMPNTAYISQEYFAFERDKVIGKTWACIGFASD 58
Query: 65 LKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWT 123
L + ++ R+ +G++ FHNVC H L +G+ + CPYH WT
Sbjct: 59 LIKNGYVMPVSFMNLPLLMMRNKDGEVQVFHNVCSHRGMQLVQEAGEVQGMIRCPYHSWT 118
Query: 124 YGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN 178
Y L+G L I GI KD F ++ GL PL A W V +N+ +A EE +
Sbjct: 119 YDLNGNLKGTPHIGGIAKHKDDRFKCEKHGLKPLRSAIWMDMVFVNLSGDAPSFEEHIAP 178
Query: 179 VVANEWLGGSSEILSINGIDSSLSYLCRR-------EYTIECNWKVFCDNYLDGGYHVPY 231
+ A W SE L +G+ L RR E + NWK+ +NY + YH+P+
Sbjct: 179 LEA-RW----SEFLGNDGLG-----LLRRANMGGHLEIEVASNWKLTVENYCE-AYHLPW 227
Query: 232 AHKGLASGLQL-DSYSTSLYEKVSIQRCESGSTEGTDDTH---------RLGSKAIYAFI 281
H L + +L D Y+ E+ + Q GT TH A Y +
Sbjct: 228 VHPALNTYSKLEDHYNIMFEERFAGQGSYKYDLSGTAGTHLPMFPSWPQDKQRHAEYIAL 287
Query: 282 YPNFMINRYGPWMDTNLVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM- 338
+PN ++ ++ P+ + ++ Y D + +D+ A + +S +V
Sbjct: 288 FPNVLLGIQADHAFAMMIDPIHAEKTIERLRLYYVGDEATRDEYAACRTATLESWRVVFG 347
Query: 339 EDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
EDI EG+Q+G SP + G ++P ++ + F L
Sbjct: 348 EDIGAVEGMQKGRHSPGFGGGVFSPEMDLPTHFFQKWL 385
>gi|403729737|ref|ZP_10948651.1| putative iron-sulfur protein [Gordonia rhizosphera NBRC 16068]
gi|403202868|dbj|GAB92982.1| putative iron-sulfur protein [Gordonia rhizosphera NBRC 16068]
Length = 377
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 161/376 (42%), Gaps = 22/376 (5%)
Query: 23 PQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFV 82
P +P T +YTDP ALE +VF W + L P F + +G +
Sbjct: 8 PSLPDSLISTLAGHYYTDPQVFALEQEKVFEAMWFCAVRSADLDKPGAFKTVEVGRENVL 67
Query: 83 VCRDDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGI 139
+ R G+I AF+NVCRH + L T G K+S F CPYH WTY LDG L+ A +T +
Sbjct: 68 ISRSRKGEIRAFYNVCRHRGARLCTEESGEVKRS-FQCPYHAWTYDLDGKLIAAPNLTKM 126
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEE-VDSNVVANEWLGGSSEILSINGID 198
D + E+GL + V W +V + + E E+ V ++VVA LG I D
Sbjct: 127 PDIDRDEYGLNKIAVREWLGYVWVCLADEPPSFEDSVMADVVAR--LGDVESIDHYTIAD 184
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ 256
SL R Y ++ NWK+ +N+++ YH H L L D Y+ Y +
Sbjct: 185 LSLGR--RIVYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAE 241
Query: 257 RCES------GSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTR 306
E +EG D +G + YA + P IN + + + P+A
Sbjct: 242 FGEDVKGFTVDGSEGLDHIPGVGEDQDRRYYAITVRPQVFINLVPDHVIIHRMFPMAADH 301
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
V D+ + + + +S++ +V +D CE Q ++S Y +G E
Sbjct: 302 TIVECDWLYMPHVVESGKDVSRSVELFHRVNSQDFEACERTQPAMDSRTYRNGGVLVPSE 361
Query: 367 QTMYHFHSLLHCNLTN 382
+ FH L L
Sbjct: 362 HHIGEFHDWLKSKLAE 377
>gi|392533661|ref|ZP_10280798.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Pseudoalteromonas
arctica A 37-1-2]
Length = 396
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 174/398 (43%), Gaps = 40/398 (10%)
Query: 5 SCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQ 64
S + ++ Q++ NP I +A P+ YT+P + E +VF +W VG+
Sbjct: 2 SNVKQKIIPIQQIDRVLNP---IHEATGMPNEAYTNPEYFKFERDQVFGSTWVCVGFASD 58
Query: 65 LKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWT 123
L ++ ++ ++ G + FHNVC H L G+ + CPYH WT
Sbjct: 59 LTKNGYVKPINFMDLPLLLMKNRQGDVQVFHNVCSHRGMKLIHEEGEVQGMIRCPYHSWT 118
Query: 124 YGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN 178
Y LDG L I GI KD F + GL L A W V +N+ +A EE +
Sbjct: 119 YDLDGNLKGTPHIGGIAKHKDERFKCENHGLKALRSAIWMDMVFVNLSGDAASFEEHIA- 177
Query: 179 VVANEWLGGSSEILSINGIDSSLSYLCRR-------EYTIECNWKVFCDNYLDGGYHVPY 231
+ W + + +G+D L RR E + NWK+ +N+ + YH+P+
Sbjct: 178 PLEKRW----EQFIGNDGLD-----LLRRVNMSGHIEIEVNSNWKLTIENFCE-AYHLPW 227
Query: 232 AHKGLASGLQL-DSYSTSLYEKVSIQRCESGSTEGTDDTHRLG---------SKAIYAFI 281
H L S +L D Y+ E S Q + + T TH +A Y +
Sbjct: 228 IHPALNSYSKLEDHYNIMFNEHFSGQGSLAYNLSDTAGTHLPKFPNWPEDKLRQAEYIAL 287
Query: 282 YPNFMINRYGPWMDTNLVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM- 338
+PN +I ++ P+ + ++ Y D ++KD+ A S +S +V
Sbjct: 288 FPNVLIGIQADHAFAMMIDPVNTDKTVERLRIFYVGDEAMKDEYAACRTSTVESWRVVFS 347
Query: 339 EDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
EDII EG+Q+G SP + G ++P +++ + F + L
Sbjct: 348 EDIIAVEGMQQGRYSPGFGGGAFSPEMDKPTHFFQTWL 385
>gi|190345511|gb|EDK37409.2| hypothetical protein PGUG_01507 [Meyerozyma guilliermondii ATCC
6260]
Length = 444
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 166/386 (43%), Gaps = 42/386 (10%)
Query: 25 IPIEKAL----TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
+P E L T P+SW+T LE +F +SW + + K D+F+ +
Sbjct: 16 VPEENLLPGEHTLPASWWTSEKIFELEQRAIFNKSWLFCIHESRFKKAGDYFAFSFTGIN 75
Query: 81 FVVCRDD-NGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
F + + +G+I AFHNVCRH A ++ SG C YHGW+Y DG L KA +
Sbjct: 76 FFLIKSKVDGRIKAFHNVCRHRAYPVVRKESGSSVVLGCKYHGWSYNSDGMLTKAPQFEN 135
Query: 139 IKDFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI 197
++ F +E L P++ T V +N A EE + G +SE+ +
Sbjct: 136 VQGFKKEENSLFPIKTHVTSHGLVFVNFS--ATDDEESGYLPFEKFYQGLNSELDEFDFS 193
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK----- 252
D Y E + NWK D Y + YH P AH GL S ++++Y +
Sbjct: 194 D--YEYHMSYELDGQFNWKTLMDGYQE-CYHCPTAHPGLNSAFKMETYKVVPKTRYCRHY 250
Query: 253 VSIQRCESGSTEGTDDTHRLGS----------------------KAIYAFIYPNFMINRY 290
I R E +T GS ++ +++P+ IN Y
Sbjct: 251 AEIVRNEEAPAP-EPETEENGSWFGFGKKKEQEPKKKTNVGGEFDGLWVYLFPSNGINCY 309
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRG 350
P + V+P++ T + +D + L D+A ++ + + V++ED LCE Q+
Sbjct: 310 SPAWYSIRVLPISATHTILQYDIYTKKGL--DEATKKEFVDFLQLVELEDFNLCENTQKN 367
Query: 351 LESPAYCSGRYAPSVEQTMYHFHSLL 376
L Y +G P+ E+ + ++ L+
Sbjct: 368 LNKRVYSTGYLHPTKERGVLYYQGLV 393
>gi|374335416|ref|YP_005092103.1| phenylpropionate dioxygenase large subunit-like protein
[Oceanimonas sp. GK1]
gi|372985103|gb|AEY01353.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Oceanimonas sp.
GK1]
Length = 395
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 177/400 (44%), Gaps = 44/400 (11%)
Query: 5 SCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQ 64
S S+ ++ Q++ NP I +A P++ YT + A E +V +W VG+
Sbjct: 2 SNVSQTIIPVQQVDSVLNP---IVEASGMPNTAYTSQEYFAFERDKVIGNTWACVGFASD 58
Query: 65 LKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWT 123
L ++ ++ R+ +G++ FHNVC H L G+ + CPYH WT
Sbjct: 59 LIKNGYVMPVSFMKMPLLMMRNKDGEVQVFHNVCSHRGMQLVHEPGEVQGMIRCPYHSWT 118
Query: 124 YGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN 178
Y L+G L I GI KD F ++ GL PL A W V +N+ +A EE +
Sbjct: 119 YDLNGNLKGTPHIGGIAKHKDERFKCEKHGLKPLRSAVWMDMVFVNLSGDAPSFEEHIAP 178
Query: 179 VVA--NEWLGGSSEILSINGIDSSLSYLCR------REYTIECNWKVFCDNYLDGGYHVP 230
+ + NE+LG + LS L R E +E NWK+ +NY + YH+P
Sbjct: 179 LESRWNEFLG-----------NDGLSLLRRVNMGGHLEIEVESNWKLTVENYCE-AYHLP 226
Query: 231 YAHKGLASGLQL-DSYSTSLYEKVSIQRCESGSTEGTDDTH----------RLGSKAIYA 279
+ H L + +L D Y+ ++ + Q GT TH +L A Y
Sbjct: 227 WVHPALNTYSKLEDHYNIMFEDRFAGQGSYKYDLSGTAGTHLPMFPSWPKDKL-RHAEYV 285
Query: 280 FIYPNFMINRYGPWMDTNLVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQ 337
++PN ++ ++ P+ + ++ Y D + +D+ A + +S +V
Sbjct: 286 ALFPNVLLGIQADHAFAMMIDPIHAEKTIERLRLFYVGDEATRDEYAACRTATLESWRVV 345
Query: 338 M-EDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
EDI EG+QRG SP + G ++P ++ + F L
Sbjct: 346 FGEDIGAVEGMQRGRHSPGFGGGVFSPEMDLPTHFFQKWL 385
>gi|380492505|emb|CCF34556.1| Rieske domain-containing protein [Colletotrichum higginsianum]
Length = 417
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 158/362 (43%), Gaps = 28/362 (7%)
Query: 26 PIEKALTP----PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
P ++ TP P+SWYT LE +F R W + + ++ +P D+ + +F
Sbjct: 18 PAQEDKTPVRALPASWYTSQEMYELERRAIFSRKWLLTTHKARIPNPGDWVRYDVAGYQF 77
Query: 82 VVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
++ +D GKI+A HN+CRH A ++ G F C YHGW+YGL G L KA +
Sbjct: 78 IIVQDRKGKINAMHNICRHRAFPVVTKEEGNSYTFSCKYHGWSYGLSGNLAKAPGYQDLA 137
Query: 141 DFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
F+ + L P+ V F+ +N+ + D + V + N D
Sbjct: 138 GFDKSKNNLFPVHVHIDRNGFIWVNLDAGEKPEIAWDDDFVG---IDEQERFQHYNFDDY 194
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
+ + E E NWK+ DNY + YH P AH + S L+SY + +K IQ
Sbjct: 195 VFDH--QWEMEGEWNWKILADNY-NECYHCPTAHPDIPSIADLNSYYVNT-DKAYIQHFG 250
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
+ E R+ + + +PN +NR+ +P P + + ++ + + +
Sbjct: 251 QPTEEQIAKGFRVAA----TYFWPNASMNRF---------VPSGPQKSSMRYEVYRNKNS 297
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCN 379
D+ + + +++ ED LC Q+ + + + +G P +E+ F +
Sbjct: 298 GDEDFNVISDM--YKRIMSEDKYLCANAQKNINAGVFVNGELHPDLEKGPLFFQKTVREV 355
Query: 380 LT 381
+T
Sbjct: 356 IT 357
>gi|448629439|ref|ZP_21672657.1| putative dioxygenase alpha subunit YeaW [Haloarcula vallismortis
ATCC 29715]
gi|445757465|gb|EMA08810.1| putative dioxygenase alpha subunit YeaW [Haloarcula vallismortis
ATCC 29715]
Length = 379
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 161/368 (43%), Gaps = 47/368 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP+ LE ++F R W G+ + + +P +F+ IG+ + ++ RD + ++ A
Sbjct: 26 PAKYFTDPNVHGLEKEKIFGRYWVYAGHANAITEPGAYFTRTIGDRQVIIVRDHDDEVRA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL---------------LKA 133
F NVC H S + T G CPYH W+Y LDG L L
Sbjct: 86 FFNVCAHRGSKMVEDTPMTDPGNMGRIRCPYHMWSYDLDGDLESTPQSFEEAGLNPDLSD 145
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
+ G+ N E L +E GPFV LN + E L E +
Sbjct: 146 DDVCGM---NASENSLSEVETDRIGPFVFLNFADDPTPLAEQAGT------LKSELEAMP 196
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ + + Y+ ++CNWK F NY + H H+ + ++L + +
Sbjct: 197 LGEYEHATRYVSE----VDCNWKTFAGNYSECD-HCHANHQDWITDIELTESELEVNDYH 251
Query: 254 SIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTRCKV 309
I E DD R+ +A + + +PNF +N YG T ++ P+ R ++
Sbjct: 252 WI--LHYTHDEDVDDEMRIHDEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEGRFQL 309
Query: 310 VFD-YFLDGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ D YF D ++ D ++ F++ S Q+Q ED L E GL+S A + P+ E
Sbjct: 310 IADYYFSDEAMTDAEREFVQT----SRQLQEEDFELVERQYEGLKSGALAQAQLGPN-EH 364
Query: 368 TMYHFHSL 375
T++ H L
Sbjct: 365 TVHRLHRL 372
>gi|152974581|ref|YP_001374098.1| Rieske (2Fe-2S) domain-containing protein [Bacillus cytotoxicus NVH
391-98]
gi|152023333|gb|ABS21103.1| Rieske (2Fe-2S) domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 360
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 162/359 (45%), Gaps = 39/359 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P YT+P + E ++F SWQ+VG+ Q+++ FF+ + +V R + + A
Sbjct: 19 PYDLYTNPEVVREEKDKIFSTSWQLVGHVSQVENAGSFFTTEVAGEPILVIRGKDEIVRA 78
Query: 94 FHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL--V 150
F+NVC H A+ L +G+K C YHGW++ LDG L +A G V L V
Sbjct: 79 FYNVCPHRATKLEKNEAGQKKILQCGYHGWSFHLDGKLNRAPNFKGDDQACVASACLRSV 138
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+E+A FV L+ D+ E G E LS S L ++
Sbjct: 139 RMEIAESLIFVNLD-----------DNAAPLMESYGDFFEKLSKFSFLSELKKTHDKKRV 187
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ------RCESGSTE 264
I+ NWK F DNYL+ H AH + L + Y E S+Q GS
Sbjct: 188 IKANWKAFIDNYLECD-HCHTAHPSFVATLDMKDYQIITCENYSVQGSMVKPNKNYGSVN 246
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRY-GPW-MDTNLVIPLA-PTRCKVVFDYFLDGSL-- 319
+ + GS + +++PN MI Y GP M T +IP+ T V YF D +L
Sbjct: 247 LNEAEMQGGS---FYWLWPNLMITIYPGPGNMATIQMIPIDHETTLGVYTYYFRDENLTQ 303
Query: 320 --KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
KD AF +EQV+ ED+ L E Q G S A+ G Y+ S EQ + FH ++
Sbjct: 304 EEKDLVAF-------AEQVRNEDVELVELEQVGFRSRAFQKGIYSSS-EQAVVQFHEMV 354
>gi|407365276|ref|ZP_11111808.1| Rieske 2Fe-2S family protein [Pseudomonas mandelii JR-1]
Length = 396
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 169/378 (44%), Gaps = 43/378 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVE 80
PI +A + +YT+ + LE +V ++W VG+ L P DF +
Sbjct: 20 PIHQATGLSNEFYTNHQYFELERDQVMGKTWACVGFASDLTKNGSVKPVDFMG-----LP 74
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G + FHNVC H L G+ + CPYH WTY L+G L + GI
Sbjct: 75 LLLMRNREGLVQVFHNVCSHRGMKLVQEEGEVQGVIRCPYHSWTYDLNGALRGTPHVGGI 134
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLG--GSSE 190
KD F ++ GL + A W V +N+ +A EE+ + + A ++LG G S+
Sbjct: 135 DKHKDERFACEKHGLKAINSAIWMDMVFINLSGDAQPLEEMLAPLTARWTQFLGEDGMSQ 194
Query: 191 ILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSL 249
+ G D++ I CNWK+ +NY + YH+P+ H L S +L D Y+
Sbjct: 195 LRRRPGHDAT-------TLDINCNWKLAVENYCEA-YHLPWVHPSLNSYSRLEDHYNILF 246
Query: 250 YEKVSIQRCESGSTEGTDDTH----------RLGSKAIYAFIYPNFMINRYGPWMDTNLV 299
E + Q + + TH RL A Y +PN ++ +
Sbjct: 247 DEHFAGQGSYAYNLSDVAGTHLPKFPSWPQDRL-RNAEYVAFFPNVLLGIQADHAFAMQL 305
Query: 300 IPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLESPAY 356
P+AP R + Y D +L D+ A ++ +S +V EDI EG+Q+G SP Y
Sbjct: 306 EPVAPGRTIEHLRLFYVGDEALGDEYAACRNAILESWKVVFAEDISSVEGMQKGRHSPGY 365
Query: 357 CSGRYAPSVEQTMYHFHS 374
G ++P ++ + FH
Sbjct: 366 KGGAFSPEMDVPTHFFHQ 383
>gi|397667877|ref|YP_006509414.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila]
gi|395131288|emb|CCD09551.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila]
Length = 361
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 157/368 (42%), Gaps = 29/368 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVEF 81
I KA T S +YT + + ++F ++WQ T++L P G + E
Sbjct: 10 ITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEE-PL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+ +D++G I NVC H IL C YHG + G L+ KD
Sbjct: 69 LFTKDESGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELIHMPEFELTKD 128
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F L + PF+ ++ E WL L
Sbjct: 129 FPSSNDNLSQISTGILEPFLFASLSPIVPFHEVFAEIKERLFWLPMEKMRLDKEKC---- 184
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
++Y ++ +W ++C+NYL+ H+P+ H L + ++Y+T L+ ++Q +
Sbjct: 185 -----KDYVVKSHWALYCENYLEA-LHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS 238
Query: 262 STEGTDDTHRLGS------KAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDYF 314
E + D + A Y +I+PN M+N Y PW N+V PL+P +V F F
Sbjct: 239 PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFY-PWGCSVNVVKPLSPELTQVSFLSF 297
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ D+ + + +QV+ ED + E VQRG++S Y GR++P+ EQ +HF
Sbjct: 298 V----LDESKLGKGAGGALDQVEQEDERVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQR 353
Query: 375 LLHCNLTN 382
LL C N
Sbjct: 354 LL-CEFLN 360
>gi|310799211|gb|EFQ34104.1| Rieske domain-containing protein [Glomerella graminicola M1.001]
Length = 423
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 158/363 (43%), Gaps = 21/363 (5%)
Query: 26 PIEKALTP----PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
P ++ TP P+SWYT LE +F R W + + ++ +P D+ + +F
Sbjct: 15 PAQEDKTPVRALPASWYTSQEMYELERRAIFSRKWLLTTHKSRIPNPGDWIRYDVAGYDF 74
Query: 82 VVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
++ D G HA HNVCRH A ++ G F C YHGW+YGL G L KA +
Sbjct: 75 IIVHDRKGNYHAMHNVCRHRAFPVVTKDEGNSYTFSCKYHGWSYGLSGNLAKAPGYQDLA 134
Query: 141 DFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
F+ + L P+ + F+ +N+ +A E+ N +++LG + +
Sbjct: 135 GFDKSQNNLFPIHMHIDRNGFIFVNL--DAAETPEIAWN---DDFLGIDEQERFQHYNFE 189
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
+ + E E NWK+ DNY + YH P AH + S L+SY + + IQ
Sbjct: 190 DYKFDHQWEMEGEWNWKILADNY-NECYHCPTAHPDIPSIADLNSYFVNT-QNAYIQHFG 247
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
+ E R+ + + +PN +N + +P P +C + ++ + + +
Sbjct: 248 QPTEEQIAKGFRVAA----TYFWPNASMNVSPHFFFIQRFVPSGPQKCVMRYEVYRNKNS 303
Query: 320 KD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHC 378
D D I K ++ ED LC Q+ + + + +G P +E+ F +
Sbjct: 304 SDADFNVISDMYK---RIMSEDKYLCANAQKNINAGIFVNGELHPEMEKGPLFFQKTVRE 360
Query: 379 NLT 381
+T
Sbjct: 361 VIT 363
>gi|86608743|ref|YP_477505.1| Rieske family iron-sulfur cluster-binding protein [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86557285|gb|ABD02242.1| iron-sulfur cluster-binding protein, Rieske family [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 395
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 157/363 (43%), Gaps = 42/363 (11%)
Query: 21 FNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
F P A T P +Y S E+ R+FYR W VG + L P DF ++
Sbjct: 23 FYPATVQPGARTLPGHYYVSSSRFEAEIERIFYRQWFCVGRSADLAQPGDFLQVQVLRES 82
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV----CPYHGWTYGLDGTLLKATRI 136
++ RD G+ HAF N CRH + L S + F CPYH W YGLDG LL A ++
Sbjct: 83 LILVRDPKGQAHAFFNHCRHRGTRLC--SELQGHFADGIPCPYHAWRYGLDGQLLAAPQM 140
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSI 194
++DF +++ L +A W FV +N+ + +EV + + EW
Sbjct: 141 HEVEDFRREDYPLHSAALAEWEGFVWVNLSRNPQPFDEVFAPLQGRFREW---------- 190
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--- 251
S+L R EY ++ NWK+ +NY + YH P H LA S L E
Sbjct: 191 --NLSALRRGHRIEYNVQANWKLLFENYSE-CYHCPLIHPELARLSPARSGRNDLMEGPF 247
Query: 252 --------------KVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTN 297
+S QR + + R +A Y + PN ++ ++ T+
Sbjct: 248 LGGYMLLNPDVTSLNMSGQRSLPLISTVRGENQR---RAYYYTLMPNLFLSLQPDYVMTH 304
Query: 298 LVIPLAPTRCKVVFDYFLDG-SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY 356
+ P R +VV D+ + +L D + ++ ++ +D LCE Q+G+ S AY
Sbjct: 305 TLWPQGSDRTRVVCDWLFEPETLALDGFDPSEVVELWDRTNRQDWHLCELTQQGVGSRAY 364
Query: 357 CSG 359
+G
Sbjct: 365 EAG 367
>gi|391867709|gb|EIT76949.1| phenylpropionate dioxygenase [Aspergillus oryzae 3.042]
Length = 355
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 158/352 (44%), Gaps = 27/352 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P KAL PSSWY + ALE +F + W VV + + D+ + + + +
Sbjct: 20 PQTKAL--PSSWYRSEALYALERRAIFSKKWMVVTHRTRFTKTGDYVQLNVAGYGYFIIK 77
Query: 86 DDNGKIHAFHNVCRHHA--SILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
D G I AFHNVCRH A I + G SG + C YHGW+YGLDG L KA R ++ F
Sbjct: 78 DRTGTIRAFHNVCRHRAYPVIQSEGESGTANIISCKYHGWSYGLDGKLAKAPRYQDVEGF 137
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSL 201
++ GL P+ V + ++G V+ E D V E G + + G D S
Sbjct: 138 EKEKMGLYPIHVH------IDHLGFVWVNLEAGDRPSVPWEEDFEGVDQQPRLLGFDLS- 190
Query: 202 SYLCRREYTI--ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
Y +++ + NWK DNY + YH P H G+ + L Y + IQ
Sbjct: 191 QYHFDHTWSMMGDYNWKTLADNY-NECYHCPTGHPGVNAISDLSKYYVET-KAGHIQHFN 248
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD-YFLDGS 318
+ DT LG F +PN I + +P++ T+ ++ +D Y + +
Sbjct: 249 ADK----QDTPGLG--IFSTFYFPNASITVSPSFWYMMRCLPVSATQTRMEYDVYRHNNA 302
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
+D +I++ K QV ED LC Q+ L + + +G P E+ +
Sbjct: 303 SNEDFTYIDEFFK---QVLREDKDLCNAAQKNLNAGVFVNGELHPRAEKVRF 351
>gi|398384201|ref|ZP_10542247.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
gi|397723221|gb|EJK83728.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
Length = 386
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 159/361 (44%), Gaps = 38/361 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS-GRIGEVEFVVCRDDNGKIH 92
P+ Y DP F A+E R+F SWQ+V + + P DF + +GE +V R D+GK+
Sbjct: 17 PAWTYGDPEFFAVETRRIFRPSWQIVAHESDVPTPGDFHTLDYLGE-SIIVIRGDDGKVR 75
Query: 93 AFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
AF NVCRH + L G SG+ VCPYH WTYGLDG L + + GL P
Sbjct: 76 AFTNVCRHRGARLVDGPSGRTRKLVCPYHAWTYGLDGCLTGLPMAGSYGNLDRSRHGLSP 135
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYT 210
++V + F+ + + E+ VA + EI + +L + R
Sbjct: 136 VDVENFHGFLFVRL-------EDDGGPSVAQMMAPYAHEIAPYRFSELRALGRVTLRPRA 188
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLAS------------------GLQLDSYSTSLYEK 252
+ NWK DNY D G H+ AH GL G LD S +L E+
Sbjct: 189 V--NWKNIGDNYSD-GLHIAVAHPGLKRLMGDGYGVESSAHVDKMWGPILDRPSANLSER 245
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV-F 311
+ Q + RL + Y ++PNF + Y +D +P++PT+ +
Sbjct: 246 -AYQHFLPAVPHLPPERQRLWT---YFKLWPNFAFDIYPDQVDFMQWLPVSPTQTLIREI 301
Query: 312 DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
Y L ++ +A + + + QV ED L VQ G+ S ++ G + E + H
Sbjct: 302 SYALPEDRREMRAARYLNWRINRQVNAEDTDLVARVQAGMASDSFTVGPLS-DQEVALRH 360
Query: 372 F 372
F
Sbjct: 361 F 361
>gi|104781263|ref|YP_607761.1| dioxygenase subunit alpha [Pseudomonas entomophila L48]
gi|95110250|emb|CAK14957.1| putative dioxygenase, alpha subunit [Pseudomonas entomophila L48]
Length = 373
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 159/362 (43%), Gaps = 24/362 (6%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+A T P+ +YT + E +F RSW VG+ ++ + + + ++ +V R
Sbjct: 16 EEAFTLPAKFYTQAAVFEHEKEAIFARSWICVGHRSEVAEKNAYITRQVIGESIIVVRGR 75
Query: 88 NGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ + AF+NVC H L GSGK K+ CPYH WT+ LDG L A + +F+
Sbjct: 76 DDVLRAFYNVCPHRGHQLLEGSGKAKNVITCPYHAWTFKLDGELAHARNCENVANFDKDN 135
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
LV L V + F+ +NM D+ V ++ G + + L R
Sbjct: 136 STLVQLRVEEYAGFIYINMDN--------DAGSVEDQLPGMQKRMREACAVIDDLHLAAR 187
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
NWK DNYL+ YH AH G + + + YS SL+ ++Q + +E +
Sbjct: 188 FVSDTPANWKSIVDNYLE-CYHCAPAHPGFSDSVDVGQYSHSLHGNWTLQYGLAKPSEQS 246
Query: 267 ---DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
D+T + S A + + +P M N P + VI P + ++ L D
Sbjct: 247 FKFDETVKDPSFAGF-WAWPCTMFN-VPPGANFMTVIYEFPVDAETTLQHYDIYFLNKDI 304
Query: 324 AFIEQSLKD--SEQVQMEDIILCEGVQRGLESPAY-------CSGRYAPSVEQTMYHFHS 374
+ L D E + ED+ L E VQ+GL+S Y + + E + HFH+
Sbjct: 305 TEEQHKLIDWYREVFRPEDLRLVESVQKGLKSRGYRGQGRIMVDSQRSGVSEHGIAHFHN 364
Query: 375 LL 376
L+
Sbjct: 365 LI 366
>gi|443469898|ref|ZP_21060038.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas
pseudoalcaligenes KF707]
gi|442899401|gb|ELS25867.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas
pseudoalcaligenes KF707]
Length = 396
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 168/380 (44%), Gaps = 48/380 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVE 80
PI +A +++YT+ + LE +V R+W +G+ L P DF +
Sbjct: 21 PIHEAHGLTNAFYTEQRYFELERDQVLGRNWACIGFASDLPKNSYVKPVDFMG-----LP 75
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G + FHNVC H L +G+ V CPYH WTY L+G L + GI
Sbjct: 76 LLLMRNREGLVQVFHNVCSHRGVKLVQEAGEVQGVVRCPYHSWTYDLNGGLKGTPHVGGI 135
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL L A W V +N+ +A EE + + W S+ L
Sbjct: 136 NQHKDERFACEKHGLKALRSAIWMDMVFINLSGDAPALEEQLAPLT-ERW----SQFLGS 190
Query: 195 NGIDSSLSYLCRREYT-------IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
G+ L RRE + CNWK+ +NY + YH+P+ H L S +L+ +
Sbjct: 191 EGMG-----LIRREANGGAMAIEVNCNWKLAVENYCEA-YHLPWVHPSLNSYSRLEDHYN 244
Query: 248 SLYEKVSIQRCESGSTEGTDDTH----------RLGSKAIYAFIYPNFMINRYGPWMDTN 297
++E+ + Q + + T RL + AF +PN ++
Sbjct: 245 IMFEQFAGQGSHAYNLSDVAGTQLPIFPSWPKDRLRTAEYVAF-FPNVLLGIQADHAFAM 303
Query: 298 LVIPLAPTRCKVVFDYFLDGSLKDDKAF--IEQSLKDSEQVQM-EDIILCEGVQRGLESP 354
++ P+AP + F G D F +++ +S +V EDI EG+Q+G SP
Sbjct: 304 MLEPVAPGKTIEHLRLFYVGDEALDVRFEPARRAVMESWRVVFAEDIASVEGMQKGRHSP 363
Query: 355 AYCSGRYAPSVEQTMYHFHS 374
Y G ++P ++ ++FH
Sbjct: 364 GYGGGAFSPEMDLPTHYFHK 383
>gi|165937574|ref|ZP_02226136.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166213773|ref|ZP_02239808.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167422336|ref|ZP_02314089.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|165914324|gb|EDR32939.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166204947|gb|EDR49427.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958842|gb|EDR55863.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
Length = 390
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 154/362 (42%), Gaps = 27/362 (7%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A T P+ +YT + E RVF SW + + ++ P D+ + I V+ R +
Sbjct: 36 EAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPNDYITREIIGENIVIVRGRD 95
Query: 89 GKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H L +G GK K+ CPYH WT+ LDG L A + +F+
Sbjct: 96 SVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDGELAHARNCENVTNFDKDRA 155
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
L P+ + + F+ +NM D+ V + G ++ L R
Sbjct: 156 TLFPVRLEEYAGFIFINMNP--------DAESVEQQLPGLQDKVFEACPDVHELKLAARF 207
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK DNY++ YH AH G A +Q+D Y +++ S+Q + +E +
Sbjct: 208 TTRTPANWKNIVDNYME-CYHCEPAHPGFADSVQIDRYWHTMHGNWSLQFGYAKPSEKSF 266
Query: 268 DTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLKDD 322
+ + F ++P M N P VI P + YF + L +D
Sbjct: 267 KFEEGEESSFHGFWLWPCSMFN-VPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTED 325
Query: 323 -KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQTMYHFHS 374
KA IE + ED+ L E VQ+GL+S Y GR E + HFH+
Sbjct: 326 QKALIEWY---RNVFRPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHN 382
Query: 375 LL 376
L+
Sbjct: 383 LV 384
>gi|54298113|ref|YP_124482.1| hypothetical protein lpp2170 [Legionella pneumophila str. Paris]
gi|397664655|ref|YP_006506193.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila]
gi|53751898|emb|CAH13322.1| hypothetical protein lpp2170 [Legionella pneumophila str. Paris]
gi|395128066|emb|CCD06271.1| choline monooxygenase [Legionella pneumophila subsp. pneumophila]
Length = 361
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 157/368 (42%), Gaps = 29/368 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVEF 81
I KA T S +YT + + ++F ++WQ T++L P G + E
Sbjct: 10 ITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEE-PL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+ +D++G I NVC H IL C YHG + G L+ KD
Sbjct: 69 LFTKDESGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELIHMPEFELTKD 128
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F L + PF+ ++ E WL L
Sbjct: 129 FPSSNDNLSQISTGILEPFLFASLSPIVPFHEVFAEIKERLFWLPMEKMRLDKEKC---- 184
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
++Y ++ +W ++C+NYL+ H+P+ H L + ++Y+T L+ ++Q +
Sbjct: 185 -----KDYVVKSHWALYCENYLEA-LHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS 238
Query: 262 STEGTDDTHRLGS------KAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDYF 314
E + D + A Y +I+PN M+N Y PW N++ PL+P +V F F
Sbjct: 239 PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFY-PWGCSVNVIKPLSPELTQVSFLSF 297
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ D+ + + +QV+ ED + E VQRG++S Y GR++P+ EQ +HF
Sbjct: 298 V----LDESKLGKGAGGALDQVEQEDERVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQR 353
Query: 375 LLHCNLTN 382
LL C N
Sbjct: 354 LL-CEFLN 360
>gi|325674822|ref|ZP_08154509.1| ring hydroxylating dioxygenase [Rhodococcus equi ATCC 33707]
gi|325554408|gb|EGD24083.1| ring hydroxylating dioxygenase [Rhodococcus equi ATCC 33707]
Length = 369
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 150/356 (42%), Gaps = 29/356 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
++ T P+ +Y P LE ++F +SWQ + + P D+ R G V +V
Sbjct: 23 LDAGETLPAPFYYAPEIHRLEQEKIFAKSWQYACHESAVAKPGDYAVTRAGSVPIIVTHG 82
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G++ F NVCRH +A +G K CPYHGWTYGLDG L A R +F+
Sbjct: 83 KDGQLRGFVNVCRHRLHAIAEENGNKPLLQCPYHGWTYGLDGQLKTAPRSQREPNFDCST 142
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L P+ V W +V +N A V + + IN + R
Sbjct: 143 ISLEPVSVERWDQWVFVNPDPAAAPLSTVTAGI--------RERAAEINTDLREYEFQVR 194
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGL--------ASGLQLDSYSTSLYEKVSIQRC 258
EY +ECNWK++ +N ++ YH P H +DS + +++ + I+
Sbjct: 195 YEYDMECNWKLWAENAVE-CYHCPTLHNTSFGKTYHTNPDDYAIDSDANTIWHQGPIKWL 253
Query: 259 ESGSTEGTDDTHRLGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
SG R +AF +P+ F ++ Y ++ + V P++P +C D +
Sbjct: 254 PSGVDPAGLKGFR------FAFTFPSSFFALDDYVGFVGS--VQPVSPEKCWAFVDMYAK 305
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
D +++ L ++ +ED + Q G S +GR E + F
Sbjct: 306 PGA--DPVVVKEWLDMWDRTLIEDKRATDIQQIGYNSGRVPAGRLLLDSESPLQSF 359
>gi|257055894|ref|YP_003133726.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora viridis DSM 43017]
gi|256585766|gb|ACU96899.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora viridis DSM 43017]
Length = 380
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 28/347 (8%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P S+YTDP E R+F R+W + L +P F + +G ++ R + K+
Sbjct: 20 TLPGSYYTDPEIFEREKSRIFQRNWFAAARSTDLPEPGSFRAVDVGGESVLIVRGRDRKL 79
Query: 92 HAFHNVCRHHASILA---TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF NVCRH + L +GS ++S CPYH WTYGLDG+L+ A ++ + D N E+G
Sbjct: 80 RAFLNVCRHRGARLCMADSGSVRRS-LQCPYHAWTYGLDGSLIAAPNLSSMNDVNRDEYG 138
Query: 149 LVPLEVATWGPFVLLNMGKE-AVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
LV + + W V + + +E + V + V A G + ++ GID L R
Sbjct: 139 LVGVALREWLGAVWVCLAEEPPSFTDTVQAAVTARL---GDAGMIEEWGID-ELVVGRRI 194
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLY-----------EKVS 254
Y ++ NWK+ +N+++ YH H L L + Y+ + E +
Sbjct: 195 TYDVKANWKLIVENFME-CYHCATIHPELTEVLPEFAEGYAAQYFVGHGAEFGEEIEGFT 253
Query: 255 IQ-RCESGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
+ R +G DD H + YA I P IN + + + P A R + D
Sbjct: 254 VDGRPGFDRIDGVDDEH---DRRYYAITINPQVFINLVPDHVIFHRMYPKAADRTVIECD 310
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ + D A + +S++ +V +D CE Q + S AY G
Sbjct: 311 WLYTKDVVDSGADLSKSVELFHRVNQQDFDACERCQPAMSSKAYVDG 357
>gi|440700521|ref|ZP_20882767.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
gi|440276914|gb|ELP65117.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
Length = 374
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 162/371 (43%), Gaps = 20/371 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTD A E R+F W V +L P F + +G +V
Sbjct: 6 LPDSLIATLPGSSYTDAGIFAQEQERIFETMWFCVARASELAKPGAFRTVDVGRESILVT 65
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + I A+ NVCRH + L T SG+ K F CPYH WTYGLDG L+ A +T + D
Sbjct: 66 RARDNSIRAYFNVCRHRGAKLCTEESGEVKRAFQCPYHAWTYGLDGKLVAAPNLTKMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSL 201
E+GLV + V W +V + + + EE V E +G ++ SI D +L
Sbjct: 126 GRTEYGLVAVAVREWLGYVWVCLAENPPSFEE----DVIGEVIGRLGDVESIEHYDIDNL 181
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ--- 256
S R Y ++ NWK+ +N+++ YH H L L D Y+ Y +
Sbjct: 182 SVGKRIVYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGG 240
Query: 257 RCESGSTEGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ + +G++ R+ A YA + P IN + + + P+A R V
Sbjct: 241 EVQGFTIDGSEGLDRIPGVAEEQDRRYYAITVRPQVFINLVPDHVIFHRMYPVAADRTIV 300
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ + + + +S++ ++V +D CE Q G+ S Y G E +
Sbjct: 301 ECDWLYLPHVVESGKDVTRSVELFDRVNRQDFEACERTQPGMSSRLYAKGGVLVPSEHHI 360
Query: 370 YHFHSLLHCNL 380
FH ++ L
Sbjct: 361 GAFHDWVNERL 371
>gi|315499470|ref|YP_004088273.1| rieske (2fe-2S) iron-sulfur domain protein [Asticcacaulis
excentricus CB 48]
gi|315417482|gb|ADU14122.1| Rieske (2Fe-2S) iron-sulfur domain protein [Asticcacaulis
excentricus CB 48]
Length = 402
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
I + A T P YT F A E +FY W VG +K+P D+F+ +I + VV
Sbjct: 19 IDLADAETLPPECYTSADFYAFEKEALFYHEWLCVGRESWVKNPGDYFTTKIADEPIVVA 78
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R +GK++A +VC H A ++A GSG F+CPYH W YGLDG L A + +FN
Sbjct: 79 RGRDGKVNAMSSVCAHRAMLVAEGSGNTRMFLCPYHHWAYGLDGKLTGAPAMERTCNFNK 138
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
+E GL P V W F+ +N EA ++V +E L + S+
Sbjct: 139 EEHGLTPFAVEIWNGFIFVNFDHEAAPLAPRLADV---------TEALKGYDLASADDLR 189
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKG 235
+ T NWKV +N D GYH H+G
Sbjct: 190 PQAPGTFPWNWKVMFENNND-GYHASKLHQG 219
>gi|126737926|ref|ZP_01753656.1| Rieske 2Fe-2S domain protein [Roseobacter sp. SK209-2-6]
gi|126721319|gb|EBA18023.1| Rieske 2Fe-2S domain protein [Roseobacter sp. SK209-2-6]
Length = 378
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 177/384 (46%), Gaps = 43/384 (11%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N ++P E A P YT P FL LEL +F W VG D+ ++ D+ + IG
Sbjct: 13 NAELPDELAEATPPQIYTSPEFLELELDEIFNHEWFCVGRIDEFENQGDYRTMTIGRDPV 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
VV RD +GK+ A N+CRH + L GSG K CPYH WTY LDG L+ A + +
Sbjct: 73 VVLRDRDGKLRAMSNICRHRMATLLEGSGNLKGRITCPYHAWTYNLDGQLIGAAHMR--E 130
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ KE L +V W +V +++ EA +A L SE L +D
Sbjct: 131 NFDKKEVCLPQFQVEVWQGWVYVSLDAEA--------KPLAPR-LTMLSEHLENYQLDKY 181
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK---------GLASGLQLDSYSTSLYE 251
+ L R E + NWK+ N+ + GYH+ AH LA+ + S SLY+
Sbjct: 182 RT-LFRAEEIWDTNWKILVQNFTE-GYHLFVAHAKTIEPAMPTKLANAMH-GSEGHSLYK 238
Query: 252 KVSI--QRCESGSTEGTDD---THRLGSKAIYAFIYPNFMINRYGP---WMDTNLVIPLA 303
+ I + E S D+ T + A+ + ++P +++ W+ P
Sbjct: 239 QGRIPGKSYERASDMQVDNPLLTEEDRNTAVLSAVFPCHVMSVVAERTFWLSLQ---PHG 295
Query: 304 PTRCKVVF--DYFLDGSLKDD---KAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYC 357
+ KV++ DYF G++ DD +A LK + + ED + G+ + + A
Sbjct: 296 TNQVKVLWGADYF-PGAVPDDPEERAAYAAELKAGFDVINDEDKPIIGGIVKNAGALAAA 354
Query: 358 SGRYAPSVEQTMYHFHSLLHCNLT 381
GR +P E+T+++F L LT
Sbjct: 355 PGRLSPK-ERTVWYFQQYLARILT 377
>gi|45442098|ref|NP_993637.1| dioxygenase subunit alpha [Yersinia pestis biovar Microtus str.
91001]
gi|45436961|gb|AAS62514.1| putative dioxygenase alpha subunit [Yersinia pestis biovar Microtus
str. 91001]
Length = 402
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 154/362 (42%), Gaps = 27/362 (7%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A T P+ +YT + E RVF SW + + ++ P D+ + I V+ R +
Sbjct: 48 EAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPNDYITREIIGENIVIVRGRD 107
Query: 89 GKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H L +G GK K+ CPYH WT+ LDG L A + +F+
Sbjct: 108 SVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDGELAHARNCENVTNFDKDRA 167
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
L P+ + + F+ +NM D+ V + G ++ L R
Sbjct: 168 TLFPVRLEEYAGFIFINMNP--------DAESVEQQLPGLQDKVFEACPDVHELKLAARF 219
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK DNY++ YH AH G A +Q+D Y +++ S+Q + +E +
Sbjct: 220 TTRTPANWKNIVDNYME-CYHCEPAHPGFADSVQIDRYWHTMHGNWSLQFGYAKPSEKSF 278
Query: 268 DTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLKDD 322
+ + F ++P M N P VI P + YF + L +D
Sbjct: 279 KFEEGEESSFHGFWLWPCSMFN-VPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTED 337
Query: 323 -KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQTMYHFHS 374
KA IE + ED+ L E VQ+GL+S Y GR E + HFH+
Sbjct: 338 QKALIEWY---RNVFRPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHN 394
Query: 375 LL 376
L+
Sbjct: 395 LV 396
>gi|51596849|ref|YP_071040.1| dioxygenase subunit alpha [Yersinia pseudotuberculosis IP 32953]
gi|108807984|ref|YP_651900.1| putative dioxygenase subunit alpha [Yersinia pestis Antiqua]
gi|145599187|ref|YP_001163263.1| dioxygenase alpha subunit [Yersinia pestis Pestoides F]
gi|149365598|ref|ZP_01887633.1| putative dioxygenase alpha subunit [Yersinia pestis CA88-4125]
gi|153949705|ref|YP_001400494.1| Rieske (2Fe-2S) domain-containing protein [Yersinia
pseudotuberculosis IP 31758]
gi|162420801|ref|YP_001606242.1| Rieske (2Fe-2S) domain-containing protein [Yersinia pestis Angola]
gi|165925516|ref|ZP_02221348.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|166008080|ref|ZP_02228978.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|167398731|ref|ZP_02304255.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167466417|ref|ZP_02331121.1| putative dioxygenase alpha subunit [Yersinia pestis FV-1]
gi|170023860|ref|YP_001720365.1| Rieske (2Fe-2S) domain-containing protein [Yersinia
pseudotuberculosis YPIII]
gi|186895929|ref|YP_001873041.1| Rieske (2Fe-2S) domain-containing protein [Yersinia
pseudotuberculosis PB1/+]
gi|218929582|ref|YP_002347457.1| dioxygenase alpha subunit [Yersinia pestis CO92]
gi|229838025|ref|ZP_04458184.1| putative dioxygenase alpha subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229895222|ref|ZP_04510396.1| putative dioxygenase alpha subunit [Yersinia pestis Pestoides A]
gi|229898586|ref|ZP_04513731.1| putative dioxygenase alpha subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|294504246|ref|YP_003568308.1| putative dioxygenase subunit alpha [Yersinia pestis Z176003]
gi|384122769|ref|YP_005505389.1| putative dioxygenase subunit alpha [Yersinia pestis D106004]
gi|384126664|ref|YP_005509278.1| putative dioxygenase subunit alpha [Yersinia pestis D182038]
gi|384139681|ref|YP_005522383.1| putative dioxygenase subunit alpha [Yersinia pestis A1122]
gi|420547436|ref|ZP_15045330.1| rieske domain protein [Yersinia pestis PY-01]
gi|420552765|ref|ZP_15050091.1| rieske domain protein [Yersinia pestis PY-02]
gi|420558330|ref|ZP_15054963.1| rieske domain protein [Yersinia pestis PY-03]
gi|420563797|ref|ZP_15059826.1| rieske domain protein [Yersinia pestis PY-04]
gi|420568835|ref|ZP_15064400.1| rieske domain protein [Yersinia pestis PY-05]
gi|420574509|ref|ZP_15069540.1| rieske domain protein [Yersinia pestis PY-06]
gi|420579821|ref|ZP_15074363.1| rieske domain protein [Yersinia pestis PY-07]
gi|420585143|ref|ZP_15079188.1| rieske domain protein [Yersinia pestis PY-08]
gi|420590277|ref|ZP_15083806.1| rieske domain protein [Yersinia pestis PY-09]
gi|420595670|ref|ZP_15088658.1| rieske domain protein [Yersinia pestis PY-10]
gi|420601313|ref|ZP_15093687.1| rieske domain protein [Yersinia pestis PY-11]
gi|420606739|ref|ZP_15098575.1| rieske domain protein [Yersinia pestis PY-12]
gi|420612141|ref|ZP_15103432.1| rieske domain protein [Yersinia pestis PY-13]
gi|420617513|ref|ZP_15108141.1| rieske domain protein [Yersinia pestis PY-14]
gi|420622820|ref|ZP_15112888.1| rieske domain protein [Yersinia pestis PY-15]
gi|420627910|ref|ZP_15117505.1| rieske domain protein [Yersinia pestis PY-16]
gi|420633016|ref|ZP_15122099.1| rieske domain protein [Yersinia pestis PY-19]
gi|420638223|ref|ZP_15126772.1| rieske domain protein [Yersinia pestis PY-25]
gi|420643739|ref|ZP_15131787.1| rieske domain protein [Yersinia pestis PY-29]
gi|420648978|ref|ZP_15136541.1| rieske domain protein [Yersinia pestis PY-32]
gi|420654625|ref|ZP_15141615.1| rieske domain protein [Yersinia pestis PY-34]
gi|420660100|ref|ZP_15146533.1| rieske domain protein [Yersinia pestis PY-36]
gi|420665439|ref|ZP_15151317.1| rieske domain protein [Yersinia pestis PY-42]
gi|420670306|ref|ZP_15155745.1| rieske domain protein [Yersinia pestis PY-45]
gi|420675652|ref|ZP_15160608.1| rieske domain protein [Yersinia pestis PY-46]
gi|420681256|ref|ZP_15165679.1| rieske domain protein [Yersinia pestis PY-47]
gi|420686557|ref|ZP_15170406.1| rieske domain protein [Yersinia pestis PY-48]
gi|420691762|ref|ZP_15174986.1| rieske domain protein [Yersinia pestis PY-52]
gi|420697546|ref|ZP_15180062.1| rieske domain protein [Yersinia pestis PY-53]
gi|420703222|ref|ZP_15184683.1| rieske domain protein [Yersinia pestis PY-54]
gi|420708797|ref|ZP_15189486.1| rieske domain protein [Yersinia pestis PY-55]
gi|420714211|ref|ZP_15194318.1| rieske domain protein [Yersinia pestis PY-56]
gi|420719695|ref|ZP_15199060.1| rieske domain protein [Yersinia pestis PY-58]
gi|420725199|ref|ZP_15203861.1| rieske domain protein [Yersinia pestis PY-59]
gi|420730807|ref|ZP_15208890.1| rieske domain protein [Yersinia pestis PY-60]
gi|420735827|ref|ZP_15213426.1| rieske domain protein [Yersinia pestis PY-61]
gi|420741300|ref|ZP_15218347.1| rieske domain protein [Yersinia pestis PY-63]
gi|420746905|ref|ZP_15223140.1| rieske domain protein [Yersinia pestis PY-64]
gi|420752456|ref|ZP_15228030.1| rieske domain protein [Yersinia pestis PY-65]
gi|420758061|ref|ZP_15232640.1| rieske domain protein [Yersinia pestis PY-66]
gi|420763498|ref|ZP_15237303.1| rieske domain protein [Yersinia pestis PY-71]
gi|420768700|ref|ZP_15241982.1| rieske domain protein [Yersinia pestis PY-72]
gi|420773699|ref|ZP_15246494.1| rieske domain protein [Yersinia pestis PY-76]
gi|420779291|ref|ZP_15251438.1| rieske domain protein [Yersinia pestis PY-88]
gi|420784871|ref|ZP_15256318.1| rieske domain protein [Yersinia pestis PY-89]
gi|420790074|ref|ZP_15260967.1| rieske domain protein [Yersinia pestis PY-90]
gi|420795575|ref|ZP_15265921.1| rieske domain protein [Yersinia pestis PY-91]
gi|420800629|ref|ZP_15270459.1| rieske domain protein [Yersinia pestis PY-92]
gi|420806020|ref|ZP_15275330.1| rieske domain protein [Yersinia pestis PY-93]
gi|420811324|ref|ZP_15280113.1| rieske domain protein [Yersinia pestis PY-94]
gi|420816887|ref|ZP_15285120.1| rieske domain protein [Yersinia pestis PY-95]
gi|420822189|ref|ZP_15289889.1| rieske domain protein [Yersinia pestis PY-96]
gi|420827270|ref|ZP_15294446.1| rieske domain protein [Yersinia pestis PY-98]
gi|420832973|ref|ZP_15299603.1| rieske domain protein [Yersinia pestis PY-99]
gi|420837838|ref|ZP_15303998.1| rieske domain protein [Yersinia pestis PY-100]
gi|420843013|ref|ZP_15308692.1| rieske domain protein [Yersinia pestis PY-101]
gi|420848671|ref|ZP_15313779.1| rieske domain protein [Yersinia pestis PY-102]
gi|420854224|ref|ZP_15318542.1| rieske domain protein [Yersinia pestis PY-103]
gi|420859531|ref|ZP_15323161.1| rieske domain protein [Yersinia pestis PY-113]
gi|421763987|ref|ZP_16200779.1| dioxygenase subunit alpha [Yersinia pestis INS]
gi|51590131|emb|CAH21768.1| putative dioxygenase alpha subunit [Yersinia pseudotuberculosis IP
32953]
gi|108779897|gb|ABG13955.1| putative dioxygenase alpha subunit [Yersinia pestis Antiqua]
gi|115348193|emb|CAL21121.1| putative dioxygenase alpha subunit [Yersinia pestis CO92]
gi|145210883|gb|ABP40290.1| dioxygenase alpha subunit [Yersinia pestis Pestoides F]
gi|149292011|gb|EDM42085.1| putative dioxygenase alpha subunit [Yersinia pestis CA88-4125]
gi|152961200|gb|ABS48661.1| rieske 2Fe-2S domain protein [Yersinia pseudotuberculosis IP 31758]
gi|162353616|gb|ABX87564.1| rieske 2Fe-2S domain protein [Yersinia pestis Angola]
gi|165922625|gb|EDR39776.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992462|gb|EDR44763.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|167051235|gb|EDR62643.1| rieske 2Fe-2S domain protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|169750394|gb|ACA67912.1| Rieske (2Fe-2S) domain protein [Yersinia pseudotuberculosis YPIII]
gi|186698955|gb|ACC89584.1| Rieske (2Fe-2S) domain protein [Yersinia pseudotuberculosis PB1/+]
gi|229688134|gb|EEO80205.1| putative dioxygenase alpha subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694391|gb|EEO84438.1| putative dioxygenase alpha subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701708|gb|EEO89733.1| putative dioxygenase alpha subunit [Yersinia pestis Pestoides A]
gi|262362365|gb|ACY59086.1| putative dioxygenase alpha subunit [Yersinia pestis D106004]
gi|262366328|gb|ACY62885.1| putative dioxygenase alpha subunit [Yersinia pestis D182038]
gi|294354705|gb|ADE65046.1| putative dioxygenase alpha subunit [Yersinia pestis Z176003]
gi|342854810|gb|AEL73363.1| putative dioxygenase alpha subunit [Yersinia pestis A1122]
gi|391425211|gb|EIQ87508.1| rieske domain protein [Yersinia pestis PY-01]
gi|391426561|gb|EIQ88733.1| rieske domain protein [Yersinia pestis PY-02]
gi|391427104|gb|EIQ89220.1| rieske domain protein [Yersinia pestis PY-03]
gi|391440384|gb|EIR00960.1| rieske domain protein [Yersinia pestis PY-04]
gi|391441882|gb|EIR02331.1| rieske domain protein [Yersinia pestis PY-05]
gi|391445359|gb|EIR05492.1| rieske domain protein [Yersinia pestis PY-06]
gi|391457396|gb|EIR16336.1| rieske domain protein [Yersinia pestis PY-07]
gi|391458371|gb|EIR17242.1| rieske domain protein [Yersinia pestis PY-08]
gi|391460545|gb|EIR19237.1| rieske domain protein [Yersinia pestis PY-09]
gi|391473467|gb|EIR30844.1| rieske domain protein [Yersinia pestis PY-10]
gi|391475115|gb|EIR32342.1| rieske domain protein [Yersinia pestis PY-11]
gi|391476081|gb|EIR33230.1| rieske domain protein [Yersinia pestis PY-12]
gi|391489479|gb|EIR45224.1| rieske domain protein [Yersinia pestis PY-13]
gi|391490723|gb|EIR46350.1| rieske domain protein [Yersinia pestis PY-15]
gi|391492428|gb|EIR47893.1| rieske domain protein [Yersinia pestis PY-14]
gi|391504944|gb|EIR58993.1| rieske domain protein [Yersinia pestis PY-16]
gi|391505920|gb|EIR59891.1| rieske domain protein [Yersinia pestis PY-19]
gi|391510478|gb|EIR64006.1| rieske domain protein [Yersinia pestis PY-25]
gi|391520890|gb|EIR73407.1| rieske domain protein [Yersinia pestis PY-29]
gi|391523178|gb|EIR75511.1| rieske domain protein [Yersinia pestis PY-34]
gi|391524277|gb|EIR76519.1| rieske domain protein [Yersinia pestis PY-32]
gi|391536268|gb|EIR87273.1| rieske domain protein [Yersinia pestis PY-36]
gi|391538811|gb|EIR89586.1| rieske domain protein [Yersinia pestis PY-42]
gi|391540957|gb|EIR91539.1| rieske domain protein [Yersinia pestis PY-45]
gi|391554090|gb|EIS03365.1| rieske domain protein [Yersinia pestis PY-46]
gi|391554558|gb|EIS03795.1| rieske domain protein [Yersinia pestis PY-47]
gi|391555678|gb|EIS04832.1| rieske domain protein [Yersinia pestis PY-48]
gi|391569130|gb|EIS16760.1| rieske domain protein [Yersinia pestis PY-52]
gi|391570119|gb|EIS17629.1| rieske domain protein [Yersinia pestis PY-53]
gi|391576522|gb|EIS23066.1| rieske domain protein [Yersinia pestis PY-54]
gi|391582868|gb|EIS28585.1| rieske domain protein [Yersinia pestis PY-55]
gi|391585626|gb|EIS31012.1| rieske domain protein [Yersinia pestis PY-56]
gi|391596760|gb|EIS40657.1| rieske domain protein [Yersinia pestis PY-58]
gi|391598978|gb|EIS42645.1| rieske domain protein [Yersinia pestis PY-60]
gi|391600583|gb|EIS44100.1| rieske domain protein [Yersinia pestis PY-59]
gi|391613400|gb|EIS55373.1| rieske domain protein [Yersinia pestis PY-61]
gi|391613990|gb|EIS55899.1| rieske domain protein [Yersinia pestis PY-63]
gi|391618365|gb|EIS59800.1| rieske domain protein [Yersinia pestis PY-64]
gi|391626052|gb|EIS66466.1| rieske domain protein [Yersinia pestis PY-65]
gi|391633272|gb|EIS72695.1| rieske domain protein [Yersinia pestis PY-66]
gi|391637014|gb|EIS75984.1| rieske domain protein [Yersinia pestis PY-71]
gi|391639449|gb|EIS78127.1| rieske domain protein [Yersinia pestis PY-72]
gi|391649109|gb|EIS86543.1| rieske domain protein [Yersinia pestis PY-76]
gi|391653307|gb|EIS90288.1| rieske domain protein [Yersinia pestis PY-88]
gi|391657779|gb|EIS94257.1| rieske domain protein [Yersinia pestis PY-89]
gi|391661979|gb|EIS97964.1| rieske domain protein [Yersinia pestis PY-90]
gi|391670135|gb|EIT05207.1| rieske domain protein [Yersinia pestis PY-91]
gi|391679298|gb|EIT13443.1| rieske domain protein [Yersinia pestis PY-93]
gi|391680544|gb|EIT14577.1| rieske domain protein [Yersinia pestis PY-92]
gi|391681355|gb|EIT15319.1| rieske domain protein [Yersinia pestis PY-94]
gi|391693288|gb|EIT26052.1| rieske domain protein [Yersinia pestis PY-95]
gi|391696341|gb|EIT28836.1| rieske domain protein [Yersinia pestis PY-96]
gi|391698070|gb|EIT30413.1| rieske domain protein [Yersinia pestis PY-98]
gi|391708849|gb|EIT40074.1| rieske domain protein [Yersinia pestis PY-99]
gi|391713623|gb|EIT44382.1| rieske domain protein [Yersinia pestis PY-100]
gi|391714403|gb|EIT45061.1| rieske domain protein [Yersinia pestis PY-101]
gi|391725534|gb|EIT54988.1| rieske domain protein [Yersinia pestis PY-102]
gi|391727507|gb|EIT56715.1| rieske domain protein [Yersinia pestis PY-103]
gi|391733986|gb|EIT62299.1| rieske domain protein [Yersinia pestis PY-113]
gi|411175301|gb|EKS45327.1| dioxygenase subunit alpha [Yersinia pestis INS]
Length = 374
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 154/362 (42%), Gaps = 27/362 (7%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A T P+ +YT + E RVF SW + + ++ P D+ + I V+ R +
Sbjct: 20 EAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPNDYITREIIGENIVIVRGRD 79
Query: 89 GKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H L +G GK K+ CPYH WT+ LDG L A + +F+
Sbjct: 80 SVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDGELAHARNCENVTNFDKDRA 139
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
L P+ + + F+ +NM D+ V + G ++ L R
Sbjct: 140 TLFPVRLEEYAGFIFINMNP--------DAESVEQQLPGLQDKVFEACPDVHELKLAARF 191
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK DNY++ YH AH G A +Q+D Y +++ S+Q + +E +
Sbjct: 192 TTRTPANWKNIVDNYME-CYHCEPAHPGFADSVQIDRYWHTMHGNWSLQFGYAKPSEKSF 250
Query: 268 DTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLKDD 322
+ + F ++P M N P VI P + YF + L +D
Sbjct: 251 KFEEGEESSFHGFWLWPCSMFN-VPPLKGMMTVIYEFPVDAETTLQNYDIYFTNEELTED 309
Query: 323 -KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQTMYHFHS 374
KA IE + ED+ L E VQ+GL+S Y GR E + HFH+
Sbjct: 310 QKALIEWY---RNVFRPEDLRLVESVQKGLKSRGYRGQGRIMADDKGSGISEHGIAHFHN 366
Query: 375 LL 376
L+
Sbjct: 367 LV 368
>gi|452839953|gb|EME41892.1| hypothetical protein DOTSEDRAFT_90615 [Dothistroma septosporum
NZE10]
Length = 413
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 155/343 (45%), Gaps = 29/343 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WYT LE +F R W + + + + DF + +FV+ +D I+A
Sbjct: 29 PAAWYTTEEMYQLERRAIFSRRWLFMTHNSRFQQAGDFLRFNVAGYDFVIIKDRQNNINA 88
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ SG+K+ C YHGW+YGL+G L KA + DF+ GL P+
Sbjct: 89 FHNVCRHRAYQVVEEPSGRKNILSCRYHGWSYGLNGKLAKAPDYDTLDDFDKSANGLFPI 148
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVA----NEWLGGSSEILSINGIDSSLSYLCRR 207
V FV +NM DSN E G E D + +Y
Sbjct: 149 HVHIDKKGFVWVNM----------DSNETPELSWEEQFSGVDEQERFAKFDFA-NYKLDH 197
Query: 208 EYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
Y +E NWK+ DN+ + YH H + + L +DS+ + IQ ++ +TE
Sbjct: 198 TYELEANYNWKIASDNF-NECYHCKTTHPDVPTFLTIDSHDCEGKDG-HIQHDQAPTTEQ 255
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG-SLKDDKA 324
+ + S + +P+ ++ +M +P+ P++ V ++ + + S ++D
Sbjct: 256 VEKGFDVNS----TYYFPHVSMSISPHFMMIQRFMPVGPSKTTVEYEVYRNTHSSEEDFT 311
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
I + +V ED LC+ QR L + + +G P E+
Sbjct: 312 AIADTYA---RVMKEDKALCDKAQRNLNAGVFVNGELHPRWEK 351
>gi|283832802|ref|ZP_06352543.1| putative dioxygenase subunit alpha YeaW [Citrobacter youngae ATCC
29220]
gi|291072489|gb|EFE10598.1| putative dioxygenase subunit alpha YeaW [Citrobacter youngae ATCC
29220]
Length = 374
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 161/368 (43%), Gaps = 29/368 (7%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ A T P+ +YTD E VF +SW V + +L P D+ + +
Sbjct: 17 NPQ----DAWTIPARFYTDQQAFEHEQEHVFAKSWICVAHGSELAKPNDYVTREVIGENI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDNVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ ++ L P+ + + FV +NM A EE + G + +++
Sbjct: 133 NFDSEKAHLTPVRLEEYAGFVFINMDPNAGSVEE--------QLPGLADKVIEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFL 315
+E + A + F ++P M+N P VI P + YF
Sbjct: 244 KPSEQSFKFEEGVDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDAETTLQNYDIYFT 302
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSV------EQT 368
+ L +++ + + ++ + ED+ L E VQ+GL+S Y GR E
Sbjct: 303 NEELTEEQKELIEWYRNV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADTSGSGISEHG 360
Query: 369 MYHFHSLL 376
+ HFH+L+
Sbjct: 361 IAHFHNLV 368
>gi|145259338|ref|XP_001402337.1| Rieske 2Fe-2S family protein [Aspergillus niger CBS 513.88]
gi|134074960|emb|CAK39040.1| unnamed protein product [Aspergillus niger]
gi|350631808|gb|EHA20178.1| hypothetical protein ASPNIDRAFT_46074 [Aspergillus niger ATCC 1015]
Length = 422
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 160/359 (44%), Gaps = 20/359 (5%)
Query: 23 PQIPIEKALTP-PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
P P +A+ P+SWYT LE +F R W + + +L + D+ + F
Sbjct: 15 PTAPTNEAVRALPASWYTSQEMFELERRAIFSRKWLLTTHKLRLPNTGDWLQYEVSGFNF 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ RD G I+AFHNVCRH A L T G F C YHGW+YGL+G L KA +
Sbjct: 75 VLVRDKEGNINAFHNVCRHRAFPLVTEEKGSARIFACKYHGWSYGLNGKLAKAPGYQDLD 134
Query: 141 DFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEV--DSNVVANEWLGGSSEILSINGI 197
F+ + L+P+ V F+ +N+ +A Q E+ D + + S +
Sbjct: 135 GFDKSKNSLLPIHVHIDANGFIWVNL--DAGEQPEISWDDDFKG---IDLQSRFADVKWE 189
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQR 257
D + + ++ + NWK+ DNY + YH H + + L +YS + I
Sbjct: 190 DYTFDHTWEQDGSY--NWKILADNY-NECYHCATTHPDIPALADLATYSVDTKDGGIIHD 246
Query: 258 CESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
S D G + + +PN + + +P++PTR + ++ + +
Sbjct: 247 AHSKP-----DQIAAGLRIASTYYFPNASMTVSPHFFFMQRFVPISPTRSVMKYEVYRNK 301
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ D+ + ++ +++ ED LC+ Q+ L + + +G P +E+ +F ++
Sbjct: 302 NSSDEDFDLINTM--YKRIMSEDKYLCDLTQKNLNAGVFVNGELHPKMEKGPLYFQKVV 358
>gi|56698500|ref|YP_168876.1| Rieske (2Fe-2S) domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680237|gb|AAV96903.1| Rieske 2Fe-2S domain protein [Ruegeria pomeroyi DSS-3]
Length = 380
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 158/379 (41%), Gaps = 39/379 (10%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N +P E+A P+ YT+ SF+ EL +F + W VG D L P D+ + +
Sbjct: 15 NTSVPFERARAMPTEVYTEQSFVDAELEYIFRKDWYCVGRADALSAPGDYVACELAGQPI 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
VV RD +G + A NVC H S L G G VCPYH WTY LDG L A +T +
Sbjct: 75 VVLRDRDGDLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTKNEG 134
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
F ++ L + W +V + + EA + V A I G D ++
Sbjct: 135 FCKDQYALPQVRCEEWLGWVFVCLDPEATPVAAQLAEVAAK-----------IEGYDMAN 183
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL-QLD-----------SYSTS 248
S E+ + NWKV +N+++ YH+P H G GL +L+ +Y T
Sbjct: 184 YSEAFYEEHVWDTNWKVLAENFME-SYHLPVCHAGTIGGLSRLEDMICPPGHAAFNYHTI 242
Query: 249 LY-EKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
L E + I + D R +YP+ MI + + P P +
Sbjct: 243 LKDESLRIAMAHPSNDRLEGDARR---TTYLLALYPSLMITLTPGYFWYLSLHPKGPGQV 299
Query: 308 KVVF------DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ F D+ D +D+ ++ L ++V +ED E V RGL S G
Sbjct: 300 HIRFGGGMSNDFAADPDAQDNFTALKTLL---DEVNVEDRGCTEKVYRGLCSEVATPGHL 356
Query: 362 APSVEQTMYHFHSLLHCNL 380
+ +E+ Y F L +
Sbjct: 357 S-HLERPNYDFAKYLMARI 374
>gi|91762981|ref|ZP_01264946.1| probable dioxygenase alpha chain [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718783|gb|EAS85433.1| probable dioxygenase alpha chain [Candidatus Pelagibacter ubique
HTCC1002]
Length = 397
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 161/385 (41%), Gaps = 41/385 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PIEKA P+ YT +L++E R+F W V+G + + D + + ++ R
Sbjct: 25 PIEKAHGLPNECYTSSDYLSIERERIFKDKWTVIGVGSSVPNVGDAQPYNLLGIPLIILR 84
Query: 86 DDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
D KI FHNVC H +L K+ CPYH W+Y DG L+ I G+
Sbjct: 85 DKEKKIRVFHNVCSHRGFKLLDEACALKNVLRCPYHSWSYDFDGKLVATPHIGGLNVHET 144
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSINGI 197
+ FN L ++ W + +N+ + +E + ++++ + L +
Sbjct: 145 EKFNKSSSNLKEVKTRIWMDIIFININSNELEFDEYIKPLEERWSKFISKEDQKLLKHSK 204
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQR 257
D L ++CNWK +NY + YH+P+ H L + + S + + R
Sbjct: 205 DHGYFSL-----DVKCNWKFAIENYCE-SYHLPWIHPELN---KFSNISDHYHIQGLPNR 255
Query: 258 CESGSTEGTDDTHR--------------LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
T D + L KA Y ++PN MI G +D V L
Sbjct: 256 FAGQGTNKYDQPVKGNQSFNNFPNWPKDLFKKAEYIALFPNVMI---GLHVDHFYVFWLE 312
Query: 304 PTRCKVVFDYFLDGSLKDDKA----FIEQSLKDSE---QVQMEDIILCEGVQRGLESPAY 356
P ++ + + DD A F E K++E +V +EDI EG+Q G SP Y
Sbjct: 313 PKSISETKEHLMMYYVGDDSANGSEFTEMRKKNAEFWKEVMIEDIKAIEGMQEGRNSPVY 372
Query: 357 CSGRYAPSVEQTMYHFHSLLHCNLT 381
G ++P ++ + FH + NL
Sbjct: 373 NGGNFSPVMDNPTHEFHKWVATNLV 397
>gi|429863560|gb|ELA37996.1| rieske domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 395
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 21/342 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY +P F LE +F +SW +V + Q +P + + F + +D G I
Sbjct: 4 TLPASWYREPGFYQLERRAIFSKSWILVSHIHQFNEPGKYARYEMAGYPFFIIKDRAGNI 63
Query: 92 HAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
+AF N+CRH A I+ GK C YHGW+Y ++G L KA R ++DF+ +E+ L
Sbjct: 64 NAFLNICRHRAFPIVHENEGKAFVLSCKYHGWSYSMNGNLAKAPRFDHVEDFDKEEYKLY 123
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSLSYLCRREY 209
+ + +G V+ + + ++ E GG + D S Y +
Sbjct: 124 KVHSH------VDRLGFFWVNLDAAEKPTLSWEEQFGGVDTQPRLENFDMS-DYEYDHTW 176
Query: 210 TIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
++E NWK +NY + YH P AH GLA + + EK + G
Sbjct: 177 SMEGKFNWKTLIENY-NECYHCPTAHPGLAPFFKGNKQMNYGLEKYWVAHL------GAK 229
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
R GS + +++PN + + ++P + T + ++ + S ++ ++
Sbjct: 230 GEERSGSVSP-TYMFPNASVTLTPVFFYMMSIVPTSATTSLMRYEVYRSKSATPEQ--VK 286
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
+ L QV+ ED L G Q L S Y +G + P VE+ +
Sbjct: 287 EKLDFFSQVESEDKWLANGSQANLNSDTYMTGPFHPDVEEAV 328
>gi|381199928|ref|ZP_09907073.1| putative dioxygenase large terminal subunit [Sphingobium yanoikuyae
XLDN2-5]
Length = 417
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 158/361 (43%), Gaps = 38/361 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS-GRIGEVEFVVCRDDNGKIH 92
P+ Y+DP F A+E R+F SWQ+V + L P DF +GE +V R D+G+
Sbjct: 17 PAWTYSDPEFFAVETRRIFRPSWQIVAHDSDLPAPGDFHVLDYLGE-SIIVIRGDDGEAR 75
Query: 93 AFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
AF NVCRH + L G SG+ VCPYH WTYGLDG L + + GL P
Sbjct: 76 AFTNVCRHRGARLVDGPSGRTRKLVCPYHAWTYGLDGCLTGLPMAGSYGNLDRSRHGLSP 135
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYT 210
+++ + F+ + + E+ VA EI + +L + R
Sbjct: 136 VDIENFHGFLFVRL-------EDDGGPSVAQMMAPYIDEIAPYRFSELRALGRVTLRPRA 188
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLAS------------------GLQLDSYSTSLYEK 252
+ NWK DNY DG H+ AH GL G LD S +L E+
Sbjct: 189 V--NWKNIGDNYSDG-LHIAVAHPGLKRLMGDGYGVEASLYADKMWGPILDRPSANLSER 245
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV-F 311
+ Q D RL + Y ++PNF + Y +D +P++PT+ +
Sbjct: 246 -AYQHFLPAVPHLPPDRQRLWT---YFKLWPNFAFDIYPDQVDFMQWLPVSPTQTLIREI 301
Query: 312 DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
Y L ++ KA + + + QV +ED L VQ G+ S ++ G + E + H
Sbjct: 302 SYALPDDRREMKAARYLNWRINRQVNVEDTELVARVQAGMASDSFTVGPLS-DQEVALRH 360
Query: 372 F 372
F
Sbjct: 361 F 361
>gi|307611058|emb|CBX00699.1| hypothetical protein LPW_24041 [Legionella pneumophila 130b]
Length = 361
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 157/369 (42%), Gaps = 31/369 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVEF 81
I KA T S +YT + ++F ++WQ T++L P G + E
Sbjct: 10 ITKASTISSEFYTSTEWFETTKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEE-PL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+ +D++G I NVC H IL C YHG + G L+ KD
Sbjct: 69 LFTKDESGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELIHMPEFELTKD 128
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F L + PF+ ++ E WL L
Sbjct: 129 FPSSNDNLSQISTGILEPFLFASLSPIVPFHEVFAEIKERLFWLPMEKMRLDKEKC---- 184
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
++Y ++ +W ++C+NYL+ H+P+ H L + ++Y+T L+ ++Q +
Sbjct: 185 -----KDYVVKSHWALYCENYLEA-LHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS 238
Query: 262 STE-------GTDDTHRLGSKAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDY 313
E G D + + A Y +I+PN M+N Y PW N+V PL+P +V F
Sbjct: 239 PDEVSFNLPKGAQDYGKQVA-AYYFWIFPNTMLNFY-PWGCSVNVVKPLSPELTQVSFLS 296
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
F+ D+ E + +QV+ ED + E VQRG++S Y GR++P+ EQ +HF
Sbjct: 297 FV----LDESKLGEGAGGALDQVEQEDERVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQ 352
Query: 374 SLLHCNLTN 382
LL C N
Sbjct: 353 RLL-CEFLN 360
>gi|393770969|ref|ZP_10359445.1| Rieske (2Fe-2S) domain protein [Novosphingobium sp. Rr 2-17]
gi|392723625|gb|EIZ81014.1| Rieske (2Fe-2S) domain protein [Novosphingobium sp. Rr 2-17]
Length = 405
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 157/362 (43%), Gaps = 38/362 (10%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+ +E+A+T P++ YT P+F E +++R WQ VG D + +P DFF+ R +V
Sbjct: 27 VELEEAVTLPAACYTTPAFYEFEKEALYFREWQCVGRADWIPNPGDFFTTRTVNEPIIVS 86
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R+ G+I A VC+H A ++A GSG F+CPYH W+Y LDG L+ A + +F+
Sbjct: 87 RNLQGEIRAMSAVCQHRAMLVAEGSGNARGFLCPYHHWSYSLDGALVAAPAMNKTCNFDR 146
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
KE GL V W F+ +N + A + V A I G D + +
Sbjct: 147 KESGLPRFAVEIWLGFIFINFDENAAPLAPRLTKVAA-----------CIEGYDLANAEG 195
Query: 205 CRREYTIEC--NWKVFCDNYLDGGYHVPYAHKG-----LASGLQ-----------LDSYS 246
R + + NWKV +N D GYH H G + SG ++
Sbjct: 196 PRPDPAAKLPWNWKVMFENNND-GYHASRLHAGPLHDFVPSGKAEFPPSEPEEAGFLRFN 254
Query: 247 TSLYEKVSI---QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+L+ S QR G D R + +A + P+ + + ++ P
Sbjct: 255 GTLHPDASFNATQRAVLPIFPGLSDEAR--HRMTFANVPPSLSLVMMSDMVIYLILRPDG 312
Query: 304 PTRCKVVFDYFLDGSLKDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
P ++ +D F ++ +++ + + +D + E VQ GL S GR
Sbjct: 313 PESLEMDTGLLFAPGAMEDPTFEHKLDMNMRATAHIIAQDFHVDELVQEGLRSRFAPRGR 372
Query: 361 YA 362
Y+
Sbjct: 373 YS 374
>gi|374702475|ref|ZP_09709345.1| Rieske 2Fe-2S family protein [Pseudomonas sp. S9]
Length = 396
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 168/380 (44%), Gaps = 47/380 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVE 80
PI +A + +YT+ + LE +V ++W +G+ L P DF +
Sbjct: 20 PIHQATGLSNEFYTEQRYFELERDQVMGKTWACIGFASDLVQKGAVKPVDFMG-----LP 74
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G + FHNVC H L G + CPYH WTY L+G L + GI
Sbjct: 75 LLLMRNREGVVQVFHNVCSHRGMKLVEEEGVVQGVIRCPYHSWTYDLNGALRGTPHVGGI 134
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL L ATW V +N+ +A EE+ + + + W S+ L
Sbjct: 135 DKHKDERFACEKHGLKALRSATWMDMVFVNLSGDAQPLEEMLAPLT-DRW----SQFLG- 188
Query: 195 NGIDSSLSYLCRR------EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYST 247
D +S L RR I CNWK+ +NY + YH+P+ H L + +L D Y+
Sbjct: 189 ---DDGMSLLRRRPGFDATTLDINCNWKLAVENYCEA-YHLPWVHPSLNTYSRLEDHYNI 244
Query: 248 SLYEKVSIQRCESGSTEGTDDTH----------RLGSKAIYAFIYPNFMINRYGPWMDTN 297
+ + Q + + TH RL A Y +PN ++
Sbjct: 245 MFGDNFAGQGSYAYNLSDVAGTHMPKFPSWPQDRL-RNAEYVAFFPNVLLGIQADHAFAM 303
Query: 298 LVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLESP 354
+ P+AP R + Y D +L D+ A S+ +S +V ED+ EG+Q+G SP
Sbjct: 304 QLEPVAPGRTLEHLRVFYVGDEALNDEYAACRNSILESWKVVFAEDVSSVEGMQKGRHSP 363
Query: 355 AYCSGRYAPSVEQTMYHFHS 374
Y G ++P ++ + FH+
Sbjct: 364 GYKGGAFSPEMDIPTHFFHT 383
>gi|320582929|gb|EFW97146.1| Rieske [2Fe-2S] domain protein, putative [Ogataea parapolymorpha
DL-1]
Length = 447
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 158/382 (41%), Gaps = 42/382 (10%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P E L P+SW+T E +F RSW V + + K D+FS F +
Sbjct: 21 LPGEHTL--PASWWTSQKVFDYEKKAIFARSWLFVTHQQRFKKAGDYFSYSFMGWNFFLI 78
Query: 85 RDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
+ G+I AFHNVCRH A ++ G C YHGW+Y DG L KA ++ F+
Sbjct: 79 KTKAGEIKAFHNVCRHRAYPVVRKQQGSSIVLGCKYHGWSYNTDGLLTKAPHFNEVEGFD 138
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
K L + T G ++ + D E+ G + ++ D Y
Sbjct: 139 PKANSLFEIRSHT------TKEGLVFINFDNTDQYTPFEEFFAGLDQEMAEYDFD-DYEY 191
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST-------SLYEKVSIQ 256
E E NWK D Y + YH P AH GL S ++++Y Y K+
Sbjct: 192 HMSYELDGEFNWKTLMDGYQE-CYHCPTAHPGLNSAFKMETYKVVPKGNYCRHYAKIVED 250
Query: 257 RCESGSTEGTD-DTHRLG---------------------SKAIYAFIYPNFMINRYGPWM 294
E E D ++ G ++ +++P +N Y P
Sbjct: 251 EIEEVEEEDPDTESSWFGFGKKKQEKKKTVKTRENPGGTFNGLWCYLFPTNGVNCYSPAF 310
Query: 295 DTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESP 354
+ V+P+AP+R + +D + L +DK ++ + +QV++ED LC Q+ L
Sbjct: 311 YSIRVLPIAPSRTILQYDIYTKKGLAEDKK--KEFVDFLQQVEIEDFNLCVQTQKNLNQG 368
Query: 355 AYCSGRYAPSVEQTMYHFHSLL 376
Y +G P E+ + H+ L+
Sbjct: 369 IYSTGYLHPLKERGVLHYQGLV 390
>gi|163795589|ref|ZP_02189555.1| Rieske (2Fe-2S) protein [alpha proteobacterium BAL199]
gi|159179188|gb|EDP63721.1| Rieske (2Fe-2S) protein [alpha proteobacterium BAL199]
Length = 386
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 155/351 (44%), Gaps = 38/351 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y D ++ LE R+ R W VG + D + ++ RD +G I A
Sbjct: 15 PNLCYVDDAYHRLEAERLLARDWLCVGVGADIPSRGDAVAIDAAGQPILLVRDRDGGIRA 74
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG-----IKDFNVKEFG 148
FHNVCRH S+L VCPYH W+Y LDG L++ + G + + G
Sbjct: 75 FHNVCRHRGSLLLEDRHSGPVLVCPYHSWSYALDGRLVRTPEVGGPGVHTCPSVDKEALG 134
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L+P+ V W FV +N+ +A + V + +A W +++ L D+
Sbjct: 135 LLPVRVGVWLDFVFVNLSGDAPPLDSVVAP-MAERWSDYATDRLVHAASDT--------- 184
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK------VSIQRCESGS 262
Y + NWK+ +NYL+ YH+P+ H GL S LD++ ++ ++ R
Sbjct: 185 YELRANWKLAIENYLE-CYHLPWVHPGLNSYSPLDAHEYRVFADRFFGPITNVYRASVAP 243
Query: 263 TE------GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL- 315
+ G + RL + Y +PN ++ + ++ PLA R + +L
Sbjct: 244 EKVLPCFPGLPEARRLVGE--YPIAFPNLLLGIQRDHLFGIIIDPLAVDRTRERLHIYLI 301
Query: 316 -DGSLKDDK--AFIEQSLKDS----EQVQMEDIILCEGVQRGLESPAYCSG 359
DG+ + + A IE + D +V EDI + E +QRG S A+ G
Sbjct: 302 DDGAARSEAETARIEAAKADLVAGWREVFTEDIGIVERMQRGRASGAFDGG 352
>gi|241953972|ref|XP_002419707.1| Rieske [2Fe-2S] domain protein, putative; choline monooxygenase,
putative; iron-sulfur cluster-binding protein, putative;
phenylpropionate dioxygenase, putative [Candida
dubliniensis CD36]
gi|223643048|emb|CAX41922.1| Rieske [2Fe-2S] domain protein, putative [Candida dubliniensis
CD36]
Length = 434
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 162/372 (43%), Gaps = 42/372 (11%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD-NGK 90
T P+SW+T S LE +F++SW ++ + D+++ + + F + + +G+
Sbjct: 27 TLPASWWTSESIFELEKRAIFHKSWMFCTHSSRFAKAGDYYAFNLTGINFFIIKSKIDGQ 86
Query: 91 IHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
+ AFHNVCRH A I+ G + C YHGW+Y DG L +A ++ F +E L
Sbjct: 87 LKAFHNVCRHRAYPIVRKDQGSSTVLGCKYHGWSYNSDGILRRAPHFDNVEGFVKEENSL 146
Query: 150 VPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRR 207
P+ T V +N + + ++W G + +N D S Y
Sbjct: 147 FPINTHVTPQGLVFVNFSSDP---------IPFDDWFSGLTS--EMNEFDFSDYEYHMSY 195
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK-----VSIQRCESGS 262
E + NWK D Y + H P H GL + ++++Y + I R E
Sbjct: 196 ELDGKFNWKTLMDGYQE-CLHCPTTHPGLNTAFKMETYKVVPKNRYCRHFAKIVRQEK-K 253
Query: 263 TEGTDDTHRLGSK------------------AIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
E D + G K ++ +++P+ IN Y P + V+P+
Sbjct: 254 VEKQDSSSWFGFKKETKEVKETKSNPGGEFDGLWVYLFPSNGINCYSPAWYSIRVLPITA 313
Query: 305 TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R + +D + L++D+ ++ + +QV++ED LCE Q+ L Y +G P
Sbjct: 314 KRTILQYDIYTKKGLEEDEK--KEFVDFLQQVELEDFDLCELTQKNLNERIYSTGYLHPE 371
Query: 365 VEQTMYHFHSLL 376
E+ + ++ ++
Sbjct: 372 KERGVLYYQGVV 383
>gi|169614297|ref|XP_001800565.1| hypothetical protein SNOG_10286 [Phaeosphaeria nodorum SN15]
gi|160707317|gb|EAT82621.2| hypothetical protein SNOG_10286 [Phaeosphaeria nodorum SN15]
Length = 425
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 162/364 (44%), Gaps = 39/364 (10%)
Query: 23 PQIPIEKALTP--PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
P P EK+ P++WYT LE +F R W ++ + + P D+ + +
Sbjct: 16 PTTPPEKSAVRALPANWYTSEEMYQLERRAIFSRRWLLLTHKSRFTTPGDYLRYSVANYD 75
Query: 81 FVVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI 139
VV +D G+IHAFHNVCRH A ++ +G F C YHGW+YGL+G L KA +
Sbjct: 76 IVVAKDRQGEIHAFHNVCRHRAYPVVEQDNGNAKIFSCKYHGWSYGLNGNLAKAPGYQDL 135
Query: 140 KDFNVKEFGLVPLEVA-TWGPFVLLNMGKEAVH----QEEVDSNVVANEWLGGSSEILSI 194
F+ E GL P+ V FV +NM + V +E+ D+ + +
Sbjct: 136 PAFDKAENGLFPIHVRLDKNGFVWINMDSKEVPEVSWEEQFDT-------VDEQERLTDF 188
Query: 195 NGIDSSLSYLCRREYTIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK 252
N D Y+ Y +E NWK+ DN+ + YH H L + L++Y +
Sbjct: 189 NFDD----YVFDHTYNMESNFNWKILADNF-NECYHCKTTHPDLPAIANLETYDVNCSAD 243
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPN--FMINR------YGPWMDTNLVIPLAP 304
IQ + TD+ G +++PN F + + +M +P AP
Sbjct: 244 -HIQH----DPKTTDEQRAAGFGICSTYMFPNVSFTVTQSTNNDISSTFMMMQKFMPKAP 298
Query: 305 TRCKVVFDYFLDGSLKDDKAFIEQSLKD-SEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
+ ++ + + + ++ AF ++ D +V ED +LCE Q + + + +G P
Sbjct: 299 GVSVMYYELWRNKNATEE-AF--HAIADLYARVMKEDKVLCERAQANINAGLFINGELHP 355
Query: 364 SVEQ 367
+E+
Sbjct: 356 HMEK 359
>gi|290955285|ref|YP_003486467.1| [2Fe-2S] protein [Streptomyces scabiei 87.22]
gi|260644811|emb|CBG67896.1| [2Fe-2S] protein [Streptomyces scabiei 87.22]
Length = 376
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 161/371 (43%), Gaps = 20/371 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTDP+F A E +F W V +L P F + +G +V
Sbjct: 6 LPDSLIATLPGSSYTDPAFFAQEQEHIFETMWFCVARASELAKPGAFRTVDVGRESILVT 65
Query: 85 RDDNGKIHAFHNVCRHHASILAT-GSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + I A+ NVCRH + L T SG+ K F CPYH WTY L+G L+ A +T + D
Sbjct: 66 RARDNSIRAYFNVCRHRGAKLCTEESGEVKRAFQCPYHAWTYDLNGKLVAAPNLTKMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKE-AVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
E+GLV + V W +V + + + +E+V VV S E I+G L
Sbjct: 126 GRTEYGLVSVAVREWLGYVWVCLAENPPSFEEDVIGEVVTRLGDVESIERYDIDG----L 181
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYE------KV 253
S R Y ++ NWK+ +N+++ YH H L L D Y+ Y
Sbjct: 182 SVGRRITYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGE 240
Query: 254 SIQRCESGSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+Q +EG D + + YA + P IN + + + P+A R V
Sbjct: 241 DVQGFTVDGSEGLDRIPGVAEDQDRRYYAITVRPQVFINLVPDHVIFHRMYPVAADRTIV 300
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ + + + +S++ ++V ++D CE Q G+ S Y G E +
Sbjct: 301 ECDWLYLPHVVESGKDVSRSVELFDRVNLQDFEACERTQPGMSSRLYAKGGVLVPSEHHI 360
Query: 370 YHFHSLLHCNL 380
FH ++ L
Sbjct: 361 GAFHDWVNERL 371
>gi|448690833|ref|ZP_21695994.1| putative dioxygenase alpha subunit YeaW [Haloarcula japonica DSM
6131]
gi|445776795|gb|EMA27772.1| putative dioxygenase alpha subunit YeaW [Haloarcula japonica DSM
6131]
Length = 368
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 39/364 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++TDP LE ++F + W G+ + + + +F+ IG+ + ++ RD + +I A
Sbjct: 15 PAKYFTDPGVHELEKEKIFGQYWVYAGHANAITEAGAYFTRTIGDKQVIIVRDHDDEIRA 74
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTLL---KATRITGIK----- 140
F NVC H S + T G CPYH W+Y LDG L K+ + G+
Sbjct: 75 FFNVCAHRGSKMVEETPMTNPGNMGRIRCPYHMWSYDLDGDLESTPKSFKEAGLNPELDD 134
Query: 141 ----DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ E GL ++ GPFV LN + + E L E + +
Sbjct: 135 DDVCGLDASENGLNEVQTDRIGPFVFLNFADDPMPLAEQAGT------LKTELEDMPLEE 188
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ 256
+ + Y+ ++CNWK F NY + H H+ + ++LD + + + I
Sbjct: 189 YEHAARYVSE----VDCNWKTFAGNYSECD-HCHANHQDWITDIELDESNLEVNDYHWI- 242
Query: 257 RCESGSTEGTDDTHRL--GSKAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTRCKVVFD 312
E DD R+ +A + + +PNF +N YG T ++ P+ R +++ D
Sbjct: 243 -LHYTHDEDVDDELRIHQEKEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEGRFQLIAD 301
Query: 313 -YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
YF D + D + ++ ++ S Q+Q ED L E GL+S A + P+ E T++
Sbjct: 302 YYFSDAEMTDAE---QEFVQTSRQLQEEDFELVERQYEGLQSGALAQAQLGPN-EHTVHK 357
Query: 372 FHSL 375
H L
Sbjct: 358 LHRL 361
>gi|170691749|ref|ZP_02882913.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170143033|gb|EDT11197.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 386
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 159/383 (41%), Gaps = 33/383 (8%)
Query: 12 VAAQKLVYEFNP--QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
+A Q LV + + P A + P YT P FLALE +F R WQ VG LK P
Sbjct: 8 IAVQALVDDLQAGCERPFGDAHSMPPGVYTSPEFLALEERAIFQREWQCVGRASSLKAPG 67
Query: 70 DFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGT 129
D+ + R+G VV RDD ++ A NVC H S+L G G VCPYH W Y LDG
Sbjct: 68 DYLTARLGAQPVVVLRDDQMQLKAMSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYSLDGA 127
Query: 130 LLKATRITGIKDFNVKEFGLVPLEVATWGP--FVLLNMGKEAVHQEEVDSNVVANEWLGG 187
L A + + F + + L + W +V L+ VH + L G
Sbjct: 128 LQGAPLMDRQQGFCKESYRLPSVRCEEWQGWLYVTLDANAPPVHTQ-----------LAG 176
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKG-LASGLQLDSYS 246
+E++ G+ + E+ + NWK+ +N+++ YH+P H+ + +LD
Sbjct: 177 LNELIGAYGMSDYIETF-HEEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLDEME 234
Query: 247 TSL------YEKVSIQRCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDT 296
Y ++ + D+T G + A+ A IYP ++ +
Sbjct: 235 CPPGSPAFNYHWITKEASLPIGNAHPDNTRLTGHWRKTTALLA-IYPTHLVTLTPGYFWY 293
Query: 297 NLVIPLAPTRCKVVFDYFLDGSLKDD---KAFIEQSLKDSEQVQMEDIILCEGVQRGLES 353
++ P R + F L D A + K ++V ED E V RG+ +
Sbjct: 294 LVLQPQGVGRVHIRFGGGLAPEFIADPEANAHMSTLKKLLDEVNAEDKRGVEAVFRGVHA 353
Query: 354 PAYCSGRYAPSVEQTMYHFHSLL 376
P G + +E+ Y F L
Sbjct: 354 PLAKPGHLS-HLERPNYDFARYL 375
>gi|448243806|ref|YP_007407859.1| putative 2Fe-2S cluster-containing protein [Serratia marcescens
WW4]
gi|445214170|gb|AGE19840.1| putative 2Fe-2S cluster-containing protein [Serratia marcescens
WW4]
Length = 374
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 157/362 (43%), Gaps = 25/362 (6%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
+A T P+ +YT + E +VF SW V + +L P D+ + I +V R
Sbjct: 19 REAYTIPARFYTHQAAFEHEKEQVFATSWICVAHRSELAQPNDYITREIIGENILVVRGR 78
Query: 88 NGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ + AF+NVC H L G G+ K+ CPYH W + LDG L A +++F+ +
Sbjct: 79 DKVLRAFYNVCPHRGHQLLAGDGRAKNVITCPYHAWAFKLDGELAHARNCENVQNFDKEN 138
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
LVP+ V + F+ +N+ +A V ++ G +++ L R
Sbjct: 139 SHLVPVRVEEYAGFIYVNLDSQA--------GTVEDQLPGLGAKVREACPQVDDLKLAAR 190
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
NWK DNYL+ YH AH G A +Q+D Y +L+ ++Q + +E +
Sbjct: 191 FVTRTPANWKNIVDNYLE-CYHCGPAHPGFADSVQVDRYWHTLHGNWTLQFGYARPSEQS 249
Query: 267 DDTHRLGSKAIYA-FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLKD 321
+ + +++P M N P VI P + YF + L D
Sbjct: 250 FKFEEGKEASFHGIWLWPCTMFN-MPPLEGMMTVIYEFPVDAETTLQHYDIYFTNADLSD 308
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-------CSGRYAPSVEQTMYHFHS 374
++ + +D + ED+ L E VQ+GL+S Y G + E + HFH+
Sbjct: 309 EQLKLIDWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADGAGSGVSEHGIAHFHN 366
Query: 375 LL 376
LL
Sbjct: 367 LL 368
>gi|154250615|ref|YP_001411439.1| Rieske (2Fe-2S) domain-containing protein [Parvibaculum
lavamentivorans DS-1]
gi|154154565|gb|ABS61782.1| Rieske (2Fe-2S) domain protein [Parvibaculum lavamentivorans DS-1]
Length = 340
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 141/349 (40%), Gaps = 29/349 (8%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+ WY +E ++ + W ++ T Q D+ S + +G +
Sbjct: 12 TLPADWYWSEDAWQIERREIWAKHWFLIARTQQFDVAGDYVSATFAGYPIFAIKGKDGLV 71
Query: 92 HAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
AFHN CRH AS L +G CPYH W Y +G L A + + + +E+GL
Sbjct: 72 RAFHNACRHRASPLVQECAGHVERLSCPYHRWLYDFEGRLRGAPTM----EIDKEEYGLF 127
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL-CRREY 209
P+ W V +++ A+ L G ++ + L + RE+
Sbjct: 128 PIRCEIWRGLVFVSLDLAAMP-------------LSGWLADIATAALRYPLEEMQLAREF 174
Query: 210 TIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
TIE NWK + DNY + +H+P H GL + + + SY + G
Sbjct: 175 TIEADVNWKTYGDNYAE-AWHIPTIHPGLNAAIDMASYKIATVGHTLQSHMADARDGGKT 233
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
D + + P N Y M+ + PL P R K+ + YF+ +A +
Sbjct: 234 D-------GFWVWRLPGLFFNMYNWGMNVAQLEPLGPRRMKLTYRYFVKDLDPTKQAERD 286
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ + V EDI +C VQR LE+ Y GR + E + F ++
Sbjct: 287 ALIDWAYMVAKEDIDICIAVQRNLETGIYERGRLSSVHENGVIQFQEMV 335
>gi|451333198|ref|ZP_21903785.1| Phenylpropionate dioxygenase [Amycolatopsis azurea DSM 43854]
gi|449424561|gb|EMD29860.1| Phenylpropionate dioxygenase [Amycolatopsis azurea DSM 43854]
Length = 375
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 159/363 (43%), Gaps = 20/363 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+YTDP+ A E ++F R W + L D+ + +IG +V R +G + AF
Sbjct: 16 GGYYTDPAIFAAEQEKIFERQWFCAVRSADLPSAGDYRTVQIGRESVLVGRGRDGGLRAF 75
Query: 95 HNVCRHHASILA---TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
NVCRH + L TG+ K++ F CPYH WTYGLDG L+ A + + + E+GL
Sbjct: 76 LNVCRHRGARLCTEETGTVKRA-FQCPYHAWTYGLDGKLIAAPNLANLPGIDRAEYGLHT 134
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ + W + + + + E+ D E L G E + G+D LS R Y +
Sbjct: 135 VHLREWLGYAWVCLAADPPSFED-DVEGAVRERL-GDLESIGHYGLD-ELSVGRRITYDV 191
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLY--------EKVSIQRCESG 261
+ NWK+ +N+++ YH H L L D Y+ Y E V + G
Sbjct: 192 KANWKLIVENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGEDVEGFTIDGG 250
Query: 262 ST-EGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
S E D + YA I P +N + + + PLAP R V D+ +
Sbjct: 251 SGFERLDGVANEQDRRYYAITIRPQVFVNLVPDHVIFHRMYPLAPDRTVVECDWLYSADV 310
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCN 379
+ +S++ +V +D CE Q + S AY +G E + FH+ L +
Sbjct: 311 VATGRDVSRSVELFHRVNEQDFDACERCQPAMASRAYRAGGVLMPSEHHIGEFHAWLRTH 370
Query: 380 LTN 382
L +
Sbjct: 371 LED 373
>gi|403051338|ref|ZP_10905822.1| Dioxygenase alpha subunit [Acinetobacter bereziniae LMG 1003]
Length = 371
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 25/355 (7%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A +KL +F NP + A T P +YT E +F +SW V + ++
Sbjct: 1 MNAVEKLPEDFCSNPDV----AWTFPKVFYTSSQVFEREKEEIFAKSWICVAHGSEVAQA 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ +V R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIIVIRGKDNILRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + F+ +NM + A V ++
Sbjct: 117 GSLALARNCDHVESFDKQNSSMVPLKVEEYAGFIFINMDENAT--------CVEDQLPEF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ ++ + L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AQKLNESCAVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYA--FIYPNFMINRYGPWMDTNLVIPLAPT 305
+ ++ ++Q + S+E + ++ + +P M N P + VI P
Sbjct: 228 TTHQNWTLQYGYARSSEKSFKLDPSVQDPTFSGFWTWPCTMFN-VPPGSNFMTVIYEFPV 286
Query: 306 RCKVVFD----YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY 356
+ YF + L D+ + + ++ + ED+ L E VQRGL+S Y
Sbjct: 287 DAETTLQHYDIYFTNEELTQDQKDLIEWYRNV--FRPEDLNLVESVQRGLKSRGY 339
>gi|54295063|ref|YP_127478.1| hypothetical protein lpl2143 [Legionella pneumophila str. Lens]
gi|53754895|emb|CAH16383.1| hypothetical protein lpl2143 [Legionella pneumophila str. Lens]
Length = 361
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 157/369 (42%), Gaps = 31/369 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD-----PQDFFSGRIGEVEF 81
I KA T S +YT + ++F ++WQ T++L P G + E
Sbjct: 10 ITKASTISSEFYTSTEWFETTKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEE-PL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+ +D++G I NVC H IL C YHG + G L+ KD
Sbjct: 69 LFTKDESGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELIHMPEFELTKD 128
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F L + PF+ ++ E WL L
Sbjct: 129 FPSSNDNLSQISTGILEPFLFASLSPIVPFHEVFAEIKERLFWLPMEKMRLDKEKC---- 184
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
++Y ++ +W ++C+NYL+ H+P+ H L + ++Y+T L+ ++Q +
Sbjct: 185 -----KDYVVKSHWALYCENYLEA-LHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS 238
Query: 262 STE-------GTDDTHRLGSKAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVFDY 313
E G D + + A Y +I+PN M+N Y PW N+V PL+P +V F
Sbjct: 239 PDEVSFNLPKGAQDYGKQVA-AYYFWIFPNTMLNFY-PWGCSVNVVKPLSPELTQVSFLS 296
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
F+ D+ + + +QV+ ED + E VQRG++S Y GR++P+ EQ +HF
Sbjct: 297 FV----LDESKLGKGAGGALDQVEQEDERVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQ 352
Query: 374 SLLHCNLTN 382
LL C N
Sbjct: 353 RLL-CEFLN 360
>gi|427408186|ref|ZP_18898388.1| hypothetical protein HMPREF9718_00862 [Sphingobium yanoikuyae ATCC
51230]
gi|425713525|gb|EKU76538.1| hypothetical protein HMPREF9718_00862 [Sphingobium yanoikuyae ATCC
51230]
Length = 417
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 156/361 (43%), Gaps = 38/361 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS-GRIGEVEFVVCRDDNGKIH 92
P+ Y+DP F A+E R+F SWQ+V + L P DF +GE +V R D+G+
Sbjct: 17 PAWTYSDPEFFAVETRRIFRPSWQIVAHDSDLPAPGDFHVLDYLGE-SIIVIRGDDGEAR 75
Query: 93 AFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
AF NVCRH + L G SG+ VCPYH WTYGLDG L + GL
Sbjct: 76 AFTNVCRHRGARLVDGPSGRTRKLVCPYHAWTYGLDGCLTGLPMAGSYGSLDRSRHGLAA 135
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYT 210
+E+ + F+ + + E+ VA EI + +L + R
Sbjct: 136 IEIENFHGFLFVRL-------EDDGGPSVAQMMAPYVDEIAPYRFSELRALGRVTLRPRA 188
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLAS------------------GLQLDSYSTSLYEK 252
+ NWK DNY DG H+ AH GL G LD S +L E+
Sbjct: 189 V--NWKNIGDNYSDG-LHIAVAHPGLKRLMGDGYGVEASPYADKMWGPILDRPSANLSER 245
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV-F 311
+ Q + D RL + Y ++PNF + Y +D +P++PT+ +
Sbjct: 246 -AYQHFLPAVPHLSPDRQRLWT---YFKLWPNFAFDIYPDQVDFMQWLPVSPTQTLIREI 301
Query: 312 DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
Y L ++ KA + + + QV ED L VQ G+ S ++ G + E + H
Sbjct: 302 SYALPDDRREMKAARYLNWRINRQVNAEDTELVARVQAGMASDSFTVGPLS-DQEVALRH 360
Query: 372 F 372
F
Sbjct: 361 F 361
>gi|452979647|gb|EME79409.1| hypothetical protein MYCFIDRAFT_34621 [Pseudocercospora fijiensis
CIRAD86]
Length = 411
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 16/329 (4%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WYT LE +F R W + + +L+ P DF +I +FV+ D N +I+A
Sbjct: 28 PAAWYTSQEMYELERRAIFQRRWLFITHKSRLQQPGDFLRYKIAGYDFVLVVDRNNQINA 87
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ SG+K+ C YHGW+YGL+G L KA I+ FN + L+P+
Sbjct: 88 FHNVCRHRAYKVVEEESGRKNILACRYHGWSYGLNGKLAKAPDYQQIEGFNKDDNSLLPI 147
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
FV +NM +A + E+ E S N + L ++ E
Sbjct: 148 HTHVDDNGFVWINM--DAGEKPEISFEQDVGEQNVKQSRFEKFNFDNYELDHVY--ELNG 203
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
+ NWK+ DN+ + YH H + + L +DS++ + +Q ++ + E +
Sbjct: 204 DYNWKIASDNF-NECYHCKTTHPDVPTFLTIDSHNCEG-DNGHLQHDQAPTKEQIEKGFD 261
Query: 272 LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLK 331
S + +P+ + ++ +P P++ + ++ + + S D+ ++
Sbjct: 262 CNS----TYYFPHASMTVSPHFLMIQKFLPGGPSKSVMHYEIYRNKSSSDEDF---HAIA 314
Query: 332 DS-EQVQMEDIILCEGVQRGLESPAYCSG 359
D+ +V ED +LCE Q L + + +G
Sbjct: 315 DTYSRVMGEDKVLCERAQSNLNAGVFVNG 343
>gi|445425116|ref|ZP_21437195.1| putative dioxygenase subunit alpha YeaW [Acinetobacter sp. WC-743]
gi|444753769|gb|ELW78407.1| putative dioxygenase subunit alpha YeaW [Acinetobacter sp. WC-743]
Length = 371
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 25/355 (7%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+ A KL +F NP + A T P +YT E +F +SW V + ++
Sbjct: 1 MNAVDKLPEDFCSNPDV----AWTFPKVFYTSSQVFEREKEEIFAKSWICVAHGSEVAQA 56
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLD 127
D+ + ++ +V R + + AF+NVC H L +GSGK K+ CPYH WT+ LD
Sbjct: 57 NDYITRKVIGENIIVIRGKDNILRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLD 116
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
G+L A ++ F+ + +VPL+V + F+ +NM + A V ++
Sbjct: 117 GSLALARNCDHVESFDKQNSSMVPLKVEEYAGFIFINMDENAT--------CVEDQLPEF 168
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ ++ + L R NWKV DNY++ YH AH G A +Q+D Y
Sbjct: 169 AQKLNESCAVIKDLKLAARFVTETPANWKVIVDNYME-CYHCGPAHPGFADSVQVDKYWH 227
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYA--FIYPNFMINRYGPWMDTNLVIPLAPT 305
+ ++ ++Q + S+E + ++ + +P M N P + VI P
Sbjct: 228 TTHQNWTLQYGYARSSEKSFKLDPSVQDPTFSGFWTWPCTMFN-VPPGSNFMTVIYEFPV 286
Query: 306 RCKVVFD----YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY 356
+ YF + +L D+ + + ++ + ED+ L E VQRGL+S Y
Sbjct: 287 DAETTLQHYDIYFTNEALTQDQKDLIEWYRNV--FRPEDLNLVESVQRGLKSRGY 339
>gi|89092324|ref|ZP_01165278.1| hypothetical protein MED92_05913 [Neptuniibacter caesariensis]
gi|89083412|gb|EAR62630.1| hypothetical protein MED92_05913 [Oceanospirillum sp. MED92]
Length = 378
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 164/390 (42%), Gaps = 61/390 (15%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P YT ++ E ++F ++WQ G+T L + +F + ++G + +V + + KI A
Sbjct: 5 PKDAYTSTTWFEKEQEKIFEQNWQFAGFTSDLNEAGEFLTVQVGRINLIVVKGPDLKIRA 64
Query: 94 FHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKA-TRITGIKDFNVKEFGLVP 151
FHN CRH + L GK CPYH W+Y L+G LL + D + K GL
Sbjct: 65 FHNQCRHRGTQLLRTCGKAGKALTCPYHDWSYSLEGDLLSVPQQREEFPDLDKKMLGLHR 124
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL-CRREYT 210
V+ W + VH E + +WLG ++ + ++ + E+
Sbjct: 125 ASVSIWKEMIW-------VHPEPAPEPLT--DWLGDIKGLVGPHRVEELIEDPDSATEHE 175
Query: 211 IECNWKVFCDNYLDGGYHVP---------YAHKGLASGL----------QLDSYSTSLYE 251
I+ NWK+ +NY+D GYH+ YAH+ G D Y+ +L E
Sbjct: 176 IKANWKIVAENYID-GYHLAHLHSATLNMYAHQQQECGFVGKHFAFYEPLTDKYADNLKE 234
Query: 252 KVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP------T 305
+ + + E LG A I+PN I +IPLAP T
Sbjct: 235 MSPLPPIDHFTEE-----QPLG--AYVPLIFPNLGIGASESSWSIFHIIPLAPNLTRVIT 287
Query: 306 RCKVV----FDYFLDGSLKDDKAFIEQSLKDSE-----------QVQMEDIILCEGVQRG 350
R KV+ + YF S + + AF S K +E EDI CE Q+
Sbjct: 288 RTKVMPASGWAYFRQ-SQRSNNAFASMSGKYAEGTSPDDPMQSGDFMAEDIFACEQQQKA 346
Query: 351 LESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
L SP + G A + E ++ F S+++ +
Sbjct: 347 LNSPYFSVGPTAQNQEASVRDFQSIINLEM 376
>gi|339501810|ref|YP_004689230.1| hypothetical protein RLO149_c002360 [Roseobacter litoralis Och 149]
gi|338755803|gb|AEI92267.1| hypothetical protein RLO149_c002360 [Roseobacter litoralis Och 149]
Length = 381
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 158/379 (41%), Gaps = 38/379 (10%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N +P E+A P+ YT +F+ EL +F + W VG +D L P D+ S +
Sbjct: 15 NTSVPFERARAMPTEVYTSQAFVDAELEHIFRKDWYCVGRSDSLVAPGDYISCELAGQPI 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
VV RD G + + NVC H S L G G VCPYH WTY LDG L A +T +
Sbjct: 75 VVLRDREGDLRSMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTRNEG 134
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
F ++ L + W +V + + A E S+V L I G D ++
Sbjct: 135 FCRDQYKLPQVRCEEWLGWVFVCLDPNAAPVAEQLSDVA-----------LMIAGYDMTN 183
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL-QLD-----------SYSTS 248
S E+ + NWKV +N+++ YH+P H G GL +L+ +Y T
Sbjct: 184 YSEAFYEEHVWDTNWKVLAENFME-SYHLPVCHAGTIGGLSRLEDMICPPGGAAFNYHTI 242
Query: 249 LYEKVSIQRCESGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRC 307
L K R D + Y +YP+ MI + + P P +
Sbjct: 243 L--KDESLRIAMAHPTKNDRLEGDARRMTYLLALYPSLMITLTPGYFWYLSLHPKGPGQV 300
Query: 308 KVVF------DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ F D+ D +++ A ++ L D V +ED E V RGL S A G
Sbjct: 301 HIRFGGGMSNDFADDPDTEENFAALKALLDD---VNVEDRGCTEKVYRGLCSDAATPGHL 357
Query: 362 APSVEQTMYHFHSLLHCNL 380
+ +E+ Y F L +
Sbjct: 358 S-HLERPNYDFAQYLMAKI 375
>gi|146419752|ref|XP_001485836.1| hypothetical protein PGUG_01507 [Meyerozyma guilliermondii ATCC
6260]
Length = 444
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 164/386 (42%), Gaps = 42/386 (10%)
Query: 25 IPIEKAL----TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
+P E L T P+SW+T LE +F +SW + + K D+F+ +
Sbjct: 16 VPEENLLPGEHTLPASWWTSEKIFELEQRAIFNKSWLFCIHESRFKKAGDYFAFSFTGIN 75
Query: 81 FVVCRDD-NGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
F + + +G+I AFHNVCRH A ++ G C YHGW+Y DG L KA +
Sbjct: 76 FFLIKSKVDGRIKAFHNVCRHRAYPVVRKELGSSVVLGCKYHGWSYNSDGMLTKAPQFEN 135
Query: 139 IKDFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI 197
++ F +E L P++ T V +N A EE + G +SE+ +
Sbjct: 136 VQGFKKEENSLFPIKTHVTSHGLVFVNFS--ATDDEESGYLPFEKFYQGLNSELDEFDFS 193
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK----- 252
D Y E + NWK D Y + YH P AH GL S ++++Y +
Sbjct: 194 D--YEYHMSYELDGQFNWKTLMDGYQE-CYHCPTAHPGLNSAFKMETYKVVPKTRYCRHY 250
Query: 253 VSIQRCESGSTEGTDDTHRLGS----------------------KAIYAFIYPNFMINRY 290
I R E +T GS ++ +++P+ IN Y
Sbjct: 251 AEIVRNEEAPAP-EPETEENGSWFGFGKKKEQEPKKKTNVGGEFDGLWVYLFPSNGINCY 309
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRG 350
P + V+P+ T + +D + L D+A ++ + + V++ED LCE Q+
Sbjct: 310 SPAWYSIRVLPILATHTILQYDIYTKKGL--DEATKKEFVDFLQLVELEDFNLCENTQKN 367
Query: 351 LESPAYCSGRYAPSVEQTMYHFHSLL 376
L Y +G P+ E+ + ++ L+
Sbjct: 368 LNKRVYSTGYLHPTKERGVLYYQGLV 393
>gi|373252073|ref|ZP_09540191.1| ring hydroxylating dioxygenase subunit [Nesterenkonia sp. F]
Length = 399
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 158/364 (43%), Gaps = 27/364 (7%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
TPP YTDP A E +F R W V D L + + IG E ++ R I
Sbjct: 18 TPPGEAYTDPEIFAREQEHIFERQWNCVLRADSLPSAGQWKTATIGREEIILVRTRRSGI 77
Query: 92 HAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
A+ NVCRH + + G+ C YH WTYGLDG L+ A +T + D + +E+GL
Sbjct: 78 AAYFNVCRHRGMRVCTSDEGRNKTLQCGYHAWTYGLDGELVAAPNLTSMPDVDRQEYGLK 137
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN--GIDSSLSYLCRRE 208
P+ V W +V + + ++ E + V E E+ SI+ GI+ L+ +
Sbjct: 138 PVHVREWLGYVWVCLAEDPPSFE----DTVLGEVRTSFGEVESIDNYGIE-DLACGETKT 192
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLDSYSTSLYEKVSIQRCESG 261
Y ++ NWK+ +N+++ YH H L A GL ++ E
Sbjct: 193 YDVQANWKLIIENFME-CYHCATIHPELTEVIPEFADGLASQRAGGQVHGASFGGEVEGF 251
Query: 262 STEGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY- 313
+ +G+ L + A YA + P IN + + + P++ +R VV D+
Sbjct: 252 TVDGSSGVSELPAVAPDQERKYYAITVRPQVFINTVPDHVIIHRMFPISESRTTVVCDWL 311
Query: 314 FLDGSLKDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
FL ++ A + +S++ +V +D CE Q + S AY G E +
Sbjct: 312 FLPEVVEQIDAGTLDVSKSVELFHRVNQQDFNACELTQPSMSSTAYRGGGALVPSEHHIA 371
Query: 371 HFHS 374
FH+
Sbjct: 372 EFHA 375
>gi|254467504|ref|ZP_05080914.1| rieske (2Fe-2S) domain protein [Rhodobacterales bacterium Y4I]
gi|206684505|gb|EDZ44988.1| rieske (2Fe-2S) domain protein [Rhodobacterales bacterium Y4I]
Length = 384
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 45/384 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ-----DFFSGRIGEVE 80
P+ A P++ Y DP+ A E V +++W +G+ + +P DF +
Sbjct: 13 PVNVANGLPNAHYIDPAVFAEEKRSVLFKNWSGIGFGKDVPEPGYAKPVDFLG-----MP 67
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI 139
++ RD +G++ F N CRH IL GK + C YH W YGLDG L+ + G
Sbjct: 68 LLIVRDKDGEVGVFQNTCRHRGMILVEKPGKIRGAIRCAYHSWCYGLDGRLVSTPHVGGP 127
Query: 140 -----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+D + E GLV + W V +N+ A EE ++++ W + +
Sbjct: 128 GNNKHEDIKLDELGLVRIRSYVWRDVVFVNVDGTAPEFEEAHADLL-ERWKEFETPVHH- 185
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKV 253
G DS + ++ NWK+ +NY + YH+P+ H GL S +L D Y+ + K
Sbjct: 186 GGADSGF------KLEVKTNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYNIEVPGKY 238
Query: 254 SIQ------RCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGPWMDTNLVIPLA 303
S Q + + + E D L SK Y +YPN ++ G D I L
Sbjct: 239 SGQGTLVYRQLKGENGEVFPDFEGLSSKWDEGGEYTAVYPNVLL---GVQRDHAFAIILE 295
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM------EDIILCEGVQRGLESPAYC 357
P + ++ K + E +E ++ ED+ + EG+Q+G +
Sbjct: 296 PVDTENTVEHIELYYAKTPEETPELDNLRTENAKLWKTVFEEDVFVVEGMQKGRHGELFD 355
Query: 358 SGRYAPSVEQTMYHFHSLLHCNLT 381
GR++P+++ ++FH+ + +T
Sbjct: 356 GGRFSPAMDGPTHNFHAWVADQVT 379
>gi|344230421|gb|EGV62306.1| ISP domain-containing protein [Candida tenuis ATCC 10573]
Length = 454
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 160/382 (41%), Gaps = 50/382 (13%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD-NGK 90
T P+SW+T LE +F +SW ++ + D+F + F V + + +
Sbjct: 31 TLPASWWTSEKVFELEKRSIFNKSWLFCIHSSRFNKAGDYFRFTFAGINFFVIKSKVDNQ 90
Query: 91 IHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
I AFHNVCRH A ++ G + C YHGW+Y DG LLKA ++ F +E L
Sbjct: 91 IKAFHNVCRHRAYPVVRKDKGSSTVLGCKYHGWSYNSDGKLLKAPHFNDVEGFVKEENSL 150
Query: 150 VPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRR 207
P+ T V +N + +S + ++W G + +N D S Y
Sbjct: 151 FPVNTHVTEQGLVFVNFNNDP------ESVIPFDKWFEGLNS--ELNEFDFSDYEYHMSY 202
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK--------------- 252
E + NWK D Y + YH P AH GL+S ++++Y +
Sbjct: 203 ELDGQFNWKTLMDGYQE-CYHCPTAHPGLSSAFKMETYKVVPKNRYCRHYAQIVREEQPE 261
Query: 253 --------------VSIQRCESGSTEGTDDTHRLGSK--AIYAFIYPNFMINRYGPWMDT 296
+ Q S + G + ++ +++P IN Y P +
Sbjct: 262 SEPEPEPEQSSWFGMRKQAQPQPSPQKKPKKANPGGEFNGLWVYLFPTNGINCYSPAWYS 321
Query: 297 NLVIPLAPTRCKVVFDYFLDGSLKDD--KAFIEQSLKDSEQVQMEDIILCEGVQRGLESP 354
V+P++PT + +D F L +D K F++ + V++ED LC+ Q+ L
Sbjct: 322 IRVLPVSPTHTILQYDIFTKKGLDEDTKKEFVD----FLQLVELEDFNLCQLTQKNLNEG 377
Query: 355 AYCSGRYAPSVEQTMYHFHSLL 376
Y SG P E+ + + +L+
Sbjct: 378 VYSSGYLHPLKERGVLFYQNLV 399
>gi|429199419|ref|ZP_19191174.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
gi|428664883|gb|EKX64151.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
Length = 376
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 161/372 (43%), Gaps = 22/372 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTDP A E R+F W V + L P F + +G +V
Sbjct: 6 LPDSLIATLPGSSYTDPGIFAQEQERIFETMWFCVARSSDLAKPGAFRTVDVGRESILVT 65
Query: 85 RDDNGKIHAFHNVCRHHASILAT-GSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + + A+ NVCRH + L T SG+ K F CPYH WTYGLDG L+ A +T + D
Sbjct: 66 RARDHSVRAYFNVCRHRGAKLCTEESGEVKRAFQCPYHAWTYGLDGKLVAAPNLTKMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKE-AVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
E+GL + W +V + + + +E+V VV E LG ++ SI D +
Sbjct: 126 GRTEYGLAAVATREWLGYVWVCLAENPPSFEEDVIGAVV--ERLG---DVESIERYDIDN 180
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYE------K 252
LS R Y ++ NWK+ +N+++ YH H L L D Y+ Y
Sbjct: 181 LSVGKRIVYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFG 239
Query: 253 VSIQRCESGSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+Q +EG D + + YA + P IN + + + P+A R
Sbjct: 240 DDVQGFTVDGSEGLDRIPGVAEDQDRRYYAITVKPQVFINLVPDHVIFHRMYPMAVDRTI 299
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
V D+ + D + +S++ +V +D CE Q G+ S Y G E
Sbjct: 300 VECDWLYLPHVVDSGKDVSRSVELFHRVNQQDFDACERTQPGMSSRMYAKGGVLVPSEHH 359
Query: 369 MYHFHSLLHCNL 380
+ FH ++ L
Sbjct: 360 IGAFHDWVNERL 371
>gi|453065309|gb|EMF06271.1| dioxygenase subunit alpha yeaW [Serratia marcescens VGH107]
Length = 374
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 157/362 (43%), Gaps = 25/362 (6%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
+A T P+ +YT + E +VF SW V + +L P D+ + I +V R
Sbjct: 19 REAYTIPARFYTHQAAFEHEKEQVFATSWICVAHRSELAQPNDYITREIIGENILVVRGR 78
Query: 88 NGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ + AF+NVC H L G G+ K+ CPYH W + LDG L A +++F+ +
Sbjct: 79 DKVLRAFYNVCPHRGHQLLAGDGRAKNVITCPYHAWAFKLDGELAHARNCENVQNFDKEN 138
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L+P+ V + F+ +N+ +A V ++ G +++ L R
Sbjct: 139 SHLMPVRVEEYAGFIYVNLDSQA--------GTVEDQLPGLGAKVREACPQVDDLKLAAR 190
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
NWK DNYL+ YH AH G A +Q+D Y +L+ ++Q + +E +
Sbjct: 191 FVTRTPANWKNIVDNYLE-CYHCGPAHPGFADSVQVDRYWHTLHGNWTLQFGYARPSEQS 249
Query: 267 DDTHRLGSKAIYA-FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YFLDGSLKD 321
+ + +++P M N P VI P + YF + L D
Sbjct: 250 FKFEEGKEASFHGIWLWPCTMFN-MPPLEGMMTVIYEFPVDAETTLQHYDIYFTNADLSD 308
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-------CSGRYAPSVEQTMYHFHS 374
++ + +D + ED+ L E VQ+GL+S Y G + E + HFH+
Sbjct: 309 EQLKLIDWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADGAGSGVSEHGIAHFHN 366
Query: 375 LL 376
LL
Sbjct: 367 LL 368
>gi|453084011|gb|EMF12056.1| ISP domain-containing protein [Mycosphaerella populorum SO2202]
Length = 424
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 145/337 (43%), Gaps = 17/337 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY LE +F R WQ++ + ++ DF I ++ +D GKI+
Sbjct: 36 PASWYQSKEMYELERRAIFSRKWQLLTHQNRFVSAGDFLRFPIAGFNILLVKDRQGKING 95
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ SG F C YHGW+YGL+G L KA + F + GL+P+
Sbjct: 96 FHNVCRHRAFPVVTKDSGTARIFSCKYHGWSYGLNGKLAKAPGYQDLDGFQKENNGLLPI 155
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
V FV +N+ + + + + E + N D + E
Sbjct: 156 HVHIDRTGFVWVNLDAKETPEVAWEDDF---EGVDTQERYQQFNFEDYVFDHFW--EMEG 210
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
+ NWK+ DNY + YH P H + + L SYS + + I + TD+ R
Sbjct: 211 DYNWKILADNY-NECYHCPTTHPDIGALADLSSYSVNTTKGQIIHDAAT-----TDEQRR 264
Query: 272 LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG-SLKDDKAFIEQSL 330
G ++ +PN N + +P + + + + F + S D + +
Sbjct: 265 AGLIVAASYYFPNVSTNISPHFFMIQRFVPSSASTSSMQYQVFRNKHSSTADFTLVSEIY 324
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
K ++ ED LC+ Q+ L + + +G P +E+
Sbjct: 325 K---RIMSEDKDLCDLAQKNLNAGVFINGEMHPKMEK 358
>gi|357026709|ref|ZP_09088802.1| dioxygenase [Mesorhizobium amorphae CCNWGS0123]
gi|355541351|gb|EHH10534.1| dioxygenase [Mesorhizobium amorphae CCNWGS0123]
Length = 393
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 159/371 (42%), Gaps = 40/371 (10%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T PS Y D +L ++Y+SW +V L P F + R+G E VV RDD G++
Sbjct: 20 TLPSPAYWDADAYQRDLDAIWYKSWLLVCREADLGQPLAFRTFRVGTQEIVVLRDDTGEL 79
Query: 92 HAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AFHN CRH S L + G K CPYH W+Y L G L++ + + F+ +
Sbjct: 80 RAFHNTCRHRGSQLCQESEGRLKARLITCPYHAWSYSLRGDLVRVPSKSLPEGFDKADHP 139
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + ++ W FV +N+ ++A E + + E L+ ++ R+
Sbjct: 140 LYRVALSVWRGFVFVNLAEDAGGSAETSFDPASGNLANWPLETLASG-------HVLRK- 191
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL---------DSYSTSLYEKVSIQRCE 259
+ CNWK+F +N+ + H P HK L+ + + D +L+
Sbjct: 192 -VMNCNWKIFWENF-NECLHCPGVHKDLSRLVPIYGRGLMGRHDDPEWALHADNDAPEFS 249
Query: 260 SGSTEGTDDTHRLG----------------SKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
G G + R G + YA P+ I + ++ T ++PL
Sbjct: 250 GGLRAGAETWSRDGQAHGPVFAGLTSAERAAGQTYATSLPSMFIVGHVDYVRTVRLVPLG 309
Query: 304 PTRCKVVFDYFLDG-SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
P + ++ ++ +L +A I+ + QV ED +CE Q+GL S + +G
Sbjct: 310 PEQTELTAEWLFPAEALAAPQADIDNIVAFGRQVLEEDAAICEVNQKGLRSLRHEAGVLM 369
Query: 363 PSVEQTMYHFH 373
P E ++ FH
Sbjct: 370 PE-EYDLHRFH 379
>gi|91781023|ref|YP_556230.1| putative Rieske-type ring dioxygenase [Burkholderia xenovorans
LB400]
gi|91693683|gb|ABE36880.1| Putative Rieske-type ring dioxygenase [Burkholderia xenovorans
LB400]
Length = 387
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P +A P YT ALE R+F +W G +++ +P D+ + I FV+
Sbjct: 20 RLPRSRAQQMPGKMYTSSEVAALEKKRIFMDTWLCAGREEEIANPGDYMTREIASEPFVL 79
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
RD GK+HAF N+C H +A GSG F CPYH W Y L GTLL A + + N
Sbjct: 80 SRDKEGKVHAFLNMCLHRGVPVAEGSGNARGFSCPYHAWYYDLQGTLLAAP-LMEQSEAN 138
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+K L P+ +A W ++ ++ +A+ E + N W S E LS
Sbjct: 139 LKNCRLKPMRLALWRGWIFVSFNPDAMPFETFIAPFEENLWWFKSDEC--------RLSE 190
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
R I+CNWK+ +N +D YHVP HK G
Sbjct: 191 --RVVLQIDCNWKLLVENLID-IYHVPVLHKASFGGF 224
>gi|145237048|ref|XP_001391171.1| Rieske 2Fe-2S family protein [Aspergillus niger CBS 513.88]
gi|134075636|emb|CAK39302.1| unnamed protein product [Aspergillus niger]
gi|350635345|gb|EHA23706.1| hypothetical protein ASPNIDRAFT_40235 [Aspergillus niger ATCC 1015]
Length = 410
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 145/358 (40%), Gaps = 33/358 (9%)
Query: 28 EKALTP---PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
EK+ P P SWY + LE +F + W ++ ++ +L P DF S I F +
Sbjct: 13 EKSSPPRSLPGSWYRSDAMYQLERRAIFSKRWMLLTHSSRLTKPGDFLSFTISNFSFFLT 72
Query: 85 RDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
RD G I+ FHN+CRH A ++ SG S C YHGW+YGL G L KA R + +F+
Sbjct: 73 RDREGSINGFHNICRHRAYPVVQARSGATSILSCKYHGWSYGLKGNLSKAPRFETVSNFD 132
Query: 144 VKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ GL+P+ V FV +N+ E D V + E + D
Sbjct: 133 KSQHGLLPIHVHIDKAGFVWVNL-------EAGDPEVKWEDDFQKIDEQPRMQDFDFDGE 185
Query: 203 YLCRR--EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
Y E +E NWK+ +NY + YH +H + L Y K
Sbjct: 186 YTFDHYWEMDVEANWKLLIENY-NECYHCATSHPLINGVSDLPRYRVE--PKARYMEHHI 242
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLK 320
+ + D R + YP + + +IP++ T K+ + +
Sbjct: 243 FNKDNIDAQFRRS----ITYFYPTTSVTVTDKFFYIQRMIPVSATMSKIENEVYRHRDAT 298
Query: 321 DDK-----AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
D++ AF Q L ED LC G Q L + + +G P E+ HF
Sbjct: 299 DEEFANINAFYRQVLD-------EDRDLCVGAQENLSAGVFINGELHPDKEKGPIHFQ 349
>gi|398993427|ref|ZP_10696377.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398134797|gb|EJM23933.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 389
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 31/369 (8%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+A T PS ++ D + E +F +W V G+ + +P + + + VV ++
Sbjct: 22 EEAFTLPSRYFYDETLFKAERDNIFMHAWHVAGHVSEFAEPGQYVVTDLFDQSVVVAKNR 81
Query: 88 NGKIHAFHNVCRHHAS-ILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVK 145
G+IHAFHNVC+H + +L G V C YH W Y +DGTL A R +K+F ++
Sbjct: 82 QGQIHAFHNVCQHRGNRLLEDRRGTTGGVVRCAYHSWCYEMDGTLRSAPRCEKMKNFELQ 141
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+F + + G F+ N+ A ++ + G E+ + +++ +
Sbjct: 142 QFNIPQIRTEEMGGFIYFNLDPAAPSLRDL--------FPGADEEMHRVFPDLANMRLIE 193
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYA---HKGLASGLQLDSYSTSLYEK--VSIQRCES 260
++ + NWKV DN ++ GYH + H LA + Y + + I
Sbjct: 194 EQDVIVPANWKVIMDNSIE-GYHFKLSGPCHIDLARLIDFKGYQLTKRDNWWTYIAPANL 252
Query: 261 GSTEGTDDTHRLGSKAIYAF----IYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
TE + F ++PN F + ++ + ++IPL R + F Y+
Sbjct: 253 SVTEAYGVPLKPDVNPDECFFNIGMWPNNTFYTFPFSEFLGSFIMIPLDAERSLLRFGYY 312
Query: 315 LDGSLKDDKAFIEQSLK-DSEQVQMEDIILCEGVQRGLESPAYCSGRY------APSVEQ 367
+ + + A E +K +E + EDI L VQ+GL S Y GRY + E
Sbjct: 313 TNNA--ETAAVSESCMKWMNEDLGPEDIALNISVQKGLRSLGYDQGRYMIDAQRSNESEH 370
Query: 368 TMYHFHSLL 376
++HFH L+
Sbjct: 371 LVHHFHRLV 379
>gi|374723525|gb|EHR75605.1| choline monooxygenase [uncultured marine group II euryarchaeote]
Length = 362
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 161/363 (44%), Gaps = 37/363 (10%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD----PQDFFSGRIGEVEFV 82
I A T PS+WYT+ L F + WQ + + P D + GE V
Sbjct: 16 IRIARTLPSAWYTELDHFN-RLQSAF-KGWQFAAHQSEFGTNNVLPVDHYEAITGE-SVV 72
Query: 83 VCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
+ + ++ H+ NVC H +A + C YHG T+ LDGTL T F
Sbjct: 73 LIKGESIACHS--NVCTHRGMRVALEACTAKTLQCRYHGRTFNLDGTLRHMPEFTEAIGF 130
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ L + W MG Q + W + +N +
Sbjct: 131 PSQGDDLAAFPLKEW-------MGM----QFTALDGLAELPWEALEDRLGFLNVEAYTHD 179
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK--VSIQRCES 260
R++TI+ NW ++ DNYL+ G+H+PY H L L +Y+T ++ + I +
Sbjct: 180 PARDRDHTIQANWMLYVDNYLE-GFHIPYVHPELNQALDYGAYTTETFDGGVLQIGKAME 238
Query: 261 GST-----EGTDDTHRLGSKAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTRCKVVF-DY 313
G EG D A Y +++PN M N Y PW + N+V+P++PT +V++ Y
Sbjct: 239 GDVKFDLPEGHPDAGE-DIAAYYLWLFPNMMFNFY-PWGLSLNIVVPVSPTETRVLYRGY 296
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+ L A +L D+ V+ +D + E VQRG+ S Y GRY+P+ EQ ++HFH
Sbjct: 297 VANPELASQGA---GALLDT--VEDQDQWVIELVQRGMASSVYDRGRYSPTREQGVHHFH 351
Query: 374 SLL 376
+L
Sbjct: 352 RML 354
>gi|408533601|emb|CCK31775.1| [2Fe-2S] protein [Streptomyces davawensis JCM 4913]
Length = 376
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 159/370 (42%), Gaps = 18/370 (4%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTDP A E R+F W V +L P F + +G +V
Sbjct: 6 LPDSLIATLPGSAYTDPGIFAQEQERIFETMWFCVARASELAKPGAFRTVDVGRESILVT 65
Query: 85 RDDNGKIHAFHNVCRHH-ASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + I A+ NVCRH A + SG+ K F CPYH WTY L+G L+ A +T + D
Sbjct: 66 RARDNSIRAYFNVCRHRGARVCTEESGEVKRAFQCPYHAWTYDLNGKLVAAPNLTKMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
E+GLV + V W +V + + ++ EE V + G E + GI+ +LS
Sbjct: 126 GRTEYGLVSVAVREWLGYVWVCLAEDPPSFEEGVMGEVVDRL--GDVESIEHYGIE-NLS 182
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSI---QR 257
R Y + NWK+ +N+++ YH H L L D Y+ Y +
Sbjct: 183 VGRRIVYDVRANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGEE 241
Query: 258 CESGSTEGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
+ + +G+ R+ A YA + P IN + + + P+A R V
Sbjct: 242 VQGFTVDGSQGLDRIPGVAEDQDRRYYAITVRPQVFINLVPDHVIFHRMYPVAVDRTVVE 301
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
D+ + + + +S++ +V +D CE Q G+ S Y G E +
Sbjct: 302 CDWLYLPHVVEGGKDVSRSVELFHRVNQQDFDACERTQPGMSSRMYAKGGVLVPSEHHIG 361
Query: 371 HFHSLLHCNL 380
FHS ++ L
Sbjct: 362 AFHSWVNERL 371
>gi|398921651|ref|ZP_10659969.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM49]
gi|398165038|gb|EJM53161.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM49]
Length = 389
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 33/370 (8%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+A T PS ++ D + E +F +W V G+ + +P + + + VV ++
Sbjct: 22 EEAFTLPSRYFYDETLFKAERDNIFMHAWHVAGHVSEFAEPGQYVVTDLFDQSVVVAKNR 81
Query: 88 NGKIHAFHNVCRHHAS-ILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVK 145
G+IHAFHNVC+H + +L G S V C YH W Y +DG+L A R +K+F ++
Sbjct: 82 QGQIHAFHNVCQHRGNRLLEERRGTTSGVVRCAYHSWCYEMDGSLRSAPRCEKMKNFELQ 141
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+F + + G F+ N+ A ++ + G E+ + + + +
Sbjct: 142 QFNIPQIRTEELGGFIYFNLDPAAPSLRDL--------FPGADEEMRRVFPDLADMRLIE 193
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYA---HKGLASGLQLDSYSTSLYEK--VSIQRCES 260
++ + NWKV DN ++G YH + H LA + Y S + I
Sbjct: 194 EQDVIVPANWKVIMDNSIEG-YHFKLSGPCHIDLAKLIDFKGYQLSKRDNWWTYIAPANL 252
Query: 261 GSTEGTDDTHRLGSKAIYAF----IYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
TE R F ++PN F + ++ + ++IPL R + F Y+
Sbjct: 253 SVTEAYGVPLRKDLNPDECFFNIGMWPNNTFYTFPFSEFLGSFIMIPLDAERSLLRFGYY 312
Query: 315 LDGSLKDDKAFIEQSLKD--SEQVQMEDIILCEGVQRGLESPAYCSGRY------APSVE 366
S + A + S +E + EDI L VQ+GL S Y GRY + E
Sbjct: 313 ---SSNAETAAVSTSCMKWMNEDLGPEDIALNISVQKGLHSLGYDQGRYMIDAQRSNESE 369
Query: 367 QTMYHFHSLL 376
++HFH L+
Sbjct: 370 HLVHHFHRLV 379
>gi|339323380|ref|YP_004682274.1| nodulation protein NodV [Cupriavidus necator N-1]
gi|338169988|gb|AEI81042.1| phenylpropionate dioxygenase or related ring-hydroxylating
dioxygenase, large terminal subunit [Cupriavidus necator
N-1]
Length = 373
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 152/345 (44%), Gaps = 32/345 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
A T P+ +YT E +F RSW V + Q+ + + + ++ V R +G
Sbjct: 16 AYTLPADYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATVKVAGENVFVVRGRDG 75
Query: 90 KIHAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H A + A G+GK K+ CPYH W++GLDG L+ + F
Sbjct: 76 VLRAFYNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIHVRNAENVPGFCKDNA 135
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GL P+ V + V +N+ ++D+ +A + G + EI + L +
Sbjct: 136 GLTPVRVEEFCGLVFVNL--------DMDAKPLAEQAAGLNDEIRARCPDVDKLVPAHKL 187
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
Y ++ NWKV DNYL+ H AH L +++++Y +E + + G T
Sbjct: 188 SYEMKANWKVVVDNYLE-CLHCQTAHPALVESIRMETYK---HEVRGLYTSQVGQTRSGS 243
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG--SLKDDKAF 325
D S A PN Y W + L + V + + +D +++ + +
Sbjct: 244 DAFTYDSDA------PNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFY 297
Query: 326 IEQSLKDSEQVQM----------EDIILCEGVQRGLESPAYCSGR 360
S +EQ Q+ ED+ + E VQRGL+S Y +G+
Sbjct: 298 FRDSTPTAEQEQLIEYYKNVLKPEDLSIVESVQRGLKSRGYRNGQ 342
>gi|254456658|ref|ZP_05070087.1| rieske 2Fe-2S family protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083660|gb|EDZ61086.1| rieske 2Fe-2S family protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 378
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 156/356 (43%), Gaps = 30/356 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y D +F E V W VG+ +LK+ D I ++ R++N +I A
Sbjct: 23 PAKSYIDENFWKKECETVLSNDWLFVGFAHELKNTGDVIPLFIANKPILLVRNNNNEIKA 82
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-----KDFNVKEF 147
FHNVC H ++ CPYH W+Y LDG L A + G K FN +
Sbjct: 83 FHNVCSHRCLKLIDEKKNVGKMIRCPYHAWSYDLDGNLKAAPHVGGTDQHKPKGFNFFDH 142
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCR 206
GL P+++ W ++ +N +A E+ +++ N ID + L Y
Sbjct: 143 GLKPIKIHIWHDWIFINFNGKAKKFEQYAKPLIS-----------KFNDIDFTKLRYAAT 191
Query: 207 REY-TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
+ I NWK +N+++ YHV + HK + D Y ++ + V E
Sbjct: 192 LNFGNINTNWKFLIENFIE-PYHVQFVHKTTTNQPLKDHY--TVVDGVCYGSGVDVYEED 248
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGP-WMDTNLVIPLAP--TRCKVVFDYFLDGSLKD- 321
T ++ L + Y ++PNF+I Y P + L +P++P T K + Y DG KD
Sbjct: 249 TKNSTALSVTSRYLSLFPNFIIGTYFPNQIGVYLNVPISPGLTSQKRII-YTTDG--KDM 305
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPA-YCSGRYAPSVEQTMYHFHSLL 376
K I+ V ED +CE +Q G SPA Y G +P E+ + F L+
Sbjct: 306 SKEEIKMVKNIWWSVHKEDHEMCERLQEGRHSPASYEGGLLSPVWEKGVQAFQKLI 361
>gi|392555717|ref|ZP_10302854.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Pseudoalteromonas
undina NCIMB 2128]
Length = 421
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 49/383 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY-TDQLKD----PQDFFSGRIGEVE 80
PI +A P+ YT+P + E VF +W VG+ +D +K+ P DF ++
Sbjct: 46 PIHEATGMPNEAYTNPEYFNFERDHVFSNTWVCVGFASDLIKNGYVMPIDFM-----DLP 100
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ + G++ FHNVC H L +G+ + CPYH WTY L+G+L + GI
Sbjct: 101 LLMMKSRQGEVQVFHNVCSHRGMKLVHEAGEVQGMIRCPYHSWTYDLNGSLKGTPHLGGI 160
Query: 140 KDFNVKEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEIL 192
N + F GL + A W V +N+ EA +E + + E+LG
Sbjct: 161 GKHNDERFACEKHGLKAIRSAIWMDMVFINLSGEASSFDEHIAPLTQRWQEFLG------ 214
Query: 193 SINGIDSSLSYLCRR------EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSY 245
D LS L R E ++ NWK+ +N+ + YH+P+ H L + +L D Y
Sbjct: 215 -----DDGLSLLRRANMGGHLEIEVKSNWKLTIENFCE-AYHLPWVHPALNTYSKLEDHY 268
Query: 246 STSLYEKVSIQRCESGSTEGTDDTH---------RLGSKAIYAFIYPNFMINRYGPWMDT 296
+ E+ S Q + T TH A Y ++PN +I
Sbjct: 269 NIMFDERFSGQGSYKYNLSDTAGTHLPKFPSWPEEKLRHAEYVALFPNVLIGIQADHAFA 328
Query: 297 NLVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLES 353
++ P++ + ++ Y D + KD+ A + +S +V EDI EG+Q+G S
Sbjct: 329 MMIDPISTDKTIERLRIFYISDEATKDEYAACRTATLESWRVVFGEDIGAVEGMQQGRYS 388
Query: 354 PAYCSGRYAPSVEQTMYHFHSLL 376
P + G ++P ++ + F L
Sbjct: 389 PGFGGGAFSPEMDTPTHFFQIWL 411
>gi|84619211|emb|CAJ42335.1| putative oxygenase [Streptomyces steffisburgensis]
Length = 387
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 157/360 (43%), Gaps = 29/360 (8%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
A++ P +T P E R+F RSW +V + DQL P D+ + I V+ R D+G
Sbjct: 36 AISLPPRLFTSPDVYESERARIFGRSWMMVAHRDQLAQPGDYLALEIAGEPVVITRGDDG 95
Query: 90 KIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
+H VCRH ++ GSG F CPYH W Y LDGTLL AT + G DF+ +
Sbjct: 96 MLHGMSPVCRHRMMPLVEPGSGNTQDFTCPYHLWRYRLDGTLLAATHMRGNADFDPGQCR 155
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEE----VDSNVVANEWLGGSSEILSINGIDSSLSYL 204
L V W FV +N+ +A E+ VD + +AN L +I S+ + +
Sbjct: 156 LPAFAVEEWRGFVFVNLQADASTLEDHLTGVDGD-LANYRLDDMVQI-------STWTEV 207
Query: 205 CRREYTIECNWKVFC----DNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
R CNWKV +NY G+H + G+ ++ ++ S + R
Sbjct: 208 WR------CNWKVAVENSYENYHAIGFHPNTVKPLMTGGIDMEVHADSPLVTRLLTRTGE 261
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
+ +Y+F ++P + +G + +IPL+ R +V + +
Sbjct: 262 PMEPSVLPLTEEEKRVLYSFRMFPCSSLATFGESIAWISLIPLSIDRTEVRGGTLMPAAA 321
Query: 320 KDDKAFIEQSLKDSEQ----VQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
+ A +E K +EQ + ED + E VQR L S G +P + + +L
Sbjct: 322 L-EGADVEAIRKQTEQFTGVINTEDRLGLEAVQRTLGSRFIERGHLSPKEPGVLAFYRNL 380
>gi|269966572|ref|ZP_06180654.1| hypothetical protein VMC_20840 [Vibrio alginolyticus 40B]
gi|269828835|gb|EEZ83087.1| hypothetical protein VMC_20840 [Vibrio alginolyticus 40B]
Length = 395
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 171/382 (44%), Gaps = 47/382 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY-TDQLKD----PQDFFSGRIGEVE 80
PI +A P+ YT + E +VF +W +G+ +D LK+ P DF + +
Sbjct: 20 PISEATGMPNQAYTSEEYFTFERDQVFGNTWVCIGFASDLLKNGYVMPLDFMN-----LP 74
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G++ FHNVC H L +G+ + CPYH WTY LDG L I GI
Sbjct: 75 LLMMRNRQGEVQVFHNVCSHRGMKLVHEAGEVQGMIRCPYHSWTYDLDGNLKGTPHIGGI 134
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL PL A W V +N+ A EE + + W + L
Sbjct: 135 AKHKDDRFKCEKHGLKPLRSAVWMDMVFVNLSGNAESFEEHIAP-LEQRW----QQFLGE 189
Query: 195 NGIDSSLSYLCRR-------EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYS 246
+G+ L RR E ++ NWK+ +NY + YH+P+ H L S +L D Y+
Sbjct: 190 DGLG-----LLRRVNMGGNLEIEVKSNWKLAVENYCE-AYHLPWVHPSLNSYSRLEDHYN 243
Query: 247 TSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPNFMINRYGPWMDTN 297
E+ + Q + + T TH + S A Y ++PN ++
Sbjct: 244 IMFAERFAGQGSLAYNLSDTAGTHLPKFPSWPEDKLRHAEYVALFPNVLLGIQADHAFAM 303
Query: 298 LVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLESP 354
++ P+ + + Y D + KD+ A + +S +V EDI EG+Q G SP
Sbjct: 304 MIEPITANKSVEHLRVFYVGDEATKDEFAACRTATVESWRVVFGEDIGAVEGMQEGRYSP 363
Query: 355 AYCSGRYAPSVEQTMYHFHSLL 376
+ G ++P ++ + F + L
Sbjct: 364 GFGGGVFSPEMDVPTHFFQTWL 385
>gi|379736925|ref|YP_005330431.1| putative ring-hydroxylating dioxygenase [Blastococcus saxobsidens
DD2]
gi|378784732|emb|CCG04401.1| putative ring-hydroxylating dioxygenase [Blastococcus saxobsidens
DD2]
Length = 376
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 151/364 (41%), Gaps = 20/364 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P +YTDP A E RVF W V TD++ P F ++G +V R +G +
Sbjct: 15 TLPGRYYTDPELFAREQERVFEAMWCCVARTDEVAAPGSFRRVQVGRESVLVVRGRDGVL 74
Query: 92 HAFHNVCRHHASILATGSGKK--SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AF NVCRH + L T + CPYH W++GLDG L+ A + + D + GL
Sbjct: 75 RAFLNVCRHRGAQLCTEESGQVHRTLRCPYHAWSFGLDGALVAAPNLARMPDVDRVANGL 134
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR-E 208
VP+ + W + + + +A E D E LG + +I G D L RR
Sbjct: 135 VPVHLREWLGYAWVCLA-DAPPSFEGDVVGAVTERLGDPA---AIEGYDVGRLALGRRIR 190
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
Y + NWK+ +N+++ YH H L L S + V + S EG
Sbjct: 191 YDVAANWKLVVENFME-CYHCATIHPELTDVLPEFSRGYAAQSYVGHGAEFAVSAEGFTV 249
Query: 269 THRLGSKAI-----------YAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
G A+ YA + P +N + + PLA R V D+
Sbjct: 250 DGGAGFPALPGIDPDQDRRYYAVTVKPAVFLNLVPDHVILLRMTPLAVDRTGVECDWLYA 309
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ + +S++ +V +D CE Q G+ S AY +G VE + FH +
Sbjct: 310 PEVVAAGLDVSRSVELFHRVNQQDFAACERTQPGMSSRAYAAGGVLVPVEHHLALFHDWV 369
Query: 377 HCNL 380
L
Sbjct: 370 RGRL 373
>gi|221632156|ref|YP_002521377.1| rieske 2Fe-2S domain-containing protein [Thermomicrobium roseum DSM
5159]
gi|221155472|gb|ACM04599.1| rieske 2Fe-2S domain protein [Thermomicrobium roseum DSM 5159]
Length = 378
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 157/367 (42%), Gaps = 22/367 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P +Y DP+ A E R+F R W +G L +P + + ++ +V R +G++
Sbjct: 11 TLPGRYYVDPAIYAREQERIFGRLWTCIGLAQSLAEPGQYLTTQLAGEPLLVIRGHDGEL 70
Query: 92 HAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF NVCRH + L T G + CPYH W+Y LDG L+ A + + +F+ + +G
Sbjct: 71 RAFLNVCRHRGARLCTESRGCLESRVIQCPYHAWSYALDGRLIGAPNMRDVPEFSPERYG 130
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVAN--EWLGGSSEILSINGIDSSLSYLCR 206
LVP+ +A W + +N+ + V+S +V E LG + I G+ L
Sbjct: 131 LVPVPLAVWEGMIWVNLSNDP---PPVESQIVPRIIERLGDRA-IFDRYGV-GQLRIGAT 185
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--------LDSYSTSLYEKVSIQRC 258
Y ++ NWK+ +N+++ YH H L+ + + + E V
Sbjct: 186 LTYDVQANWKLIVENFME-CYHCAVVHPELSRLVPSFRAGYAYQEGVGATFAEGVETLTL 244
Query: 259 ESGSTEGTDDTHRLGSKAIY--AFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
T R Y + PN +N + ++ + + PL R V D+ D
Sbjct: 245 TGKRTRPLLPGLRPEDDRTYYGMVLVPNIFVNLHPDYVLIHRLEPLDVGRTLVHCDWLFD 304
Query: 317 GSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
++ F +++ + V +D +CE Q G+ S Y G +E + F+
Sbjct: 305 PAIVATPDFDPSDAVELWDLVNRQDWAMCERCQLGVGSRVYAEGGVFAPIEAHIRRFNDW 364
Query: 376 LHCNLTN 382
+ L +
Sbjct: 365 VLTQLGD 371
>gi|390575211|ref|ZP_10255318.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|389933013|gb|EIM95034.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
Length = 382
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 158/374 (42%), Gaps = 37/374 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P +A + P YT P FLALE +F R WQ VG LK+ D+ + RIG+ VV R
Sbjct: 24 PFSEARSMPPGVYTSPEFLALEERDIFSREWQCVGRASALKNAGDYLTARIGDQPIVVLR 83
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D+ ++ A NVC H S+L G G VCPYH W Y LDGTL A + + F +
Sbjct: 84 DEQMQLKAMSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYSLDGTLKGAPLMDRQEGFCKE 143
Query: 146 EFGLVPLEVATWGP--FVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ L + W +V L+ + VH + N E++ G+ +
Sbjct: 144 SYRLPAVRCEEWQGWIYVTLDENAQPVHARLAELN-----------ELIGAYGMSDYIET 192
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQLDSYSTSL----YEKVSIQ 256
E+ + NWK+ +N+++ YH+P H+ G S L+ L Y ++ +
Sbjct: 193 FY-EEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMECPPGLPAFNYHWITKE 250
Query: 257 RCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF- 311
D+T G + A+ A IYP ++ + ++ P R + F
Sbjct: 251 ASLPIGNAHPDNTRLTGHWRKTTALLA-IYPTHLVTLTPGYFWYLVLQPEGVGRVHIRFG 309
Query: 312 -----DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
++ D A ++Q L D V ED E V RG+ +P G + +E
Sbjct: 310 GGLAPEFVADPQAHAYMATLKQLLDD---VNAEDRRGVEAVFRGVHAPLAKPGHLS-HLE 365
Query: 367 QTMYHFHSLLHCNL 380
+ Y F L +
Sbjct: 366 RPNYDFARYLAAKI 379
>gi|372278842|ref|ZP_09514878.1| Rieske (2Fe-2S) domain-containing protein [Oceanicola sp. S124]
Length = 374
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P E+A P S YT P F ALE VF SW G D LK P D+ + I +V
Sbjct: 16 VPFERAHAMPVSVYTSPDFAALEQEHVFATSWLCAGRVDALKAPGDYLTLEIAGEPVLVL 75
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
RD G + A NVCRH S+L G G CPYH WTY LDG+L A + + F
Sbjct: 76 RDREGTLRAMSNVCRHRMSVLLEGRGNARVITCPYHAWTYSLDGSLRGAPAMEMNQGFCK 135
Query: 145 KEFGLVPLEVATWGPFVLLNMGKE----AVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
++ L P+ W ++++ + + A EVD ++V + E+
Sbjct: 136 EQNALPPIRCVDWNGWIMVTLNPDLPEPATQLSEVD-DLVGYLDMAQYVEVF-------- 186
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASG 239
R E+ NWK+ +N+++ YH+P H G G
Sbjct: 187 -----REEHRWNTNWKILAENFME-SYHLPMCHGGTIGG 219
>gi|397733845|ref|ZP_10500558.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396930365|gb|EJI97561.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 400
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 154/356 (43%), Gaps = 30/356 (8%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q + A T P+ Y P L E + +W VG + + P D + R+G ++
Sbjct: 20 QEQLSDARTLPADAYLSPEVLDWERKHLLEAAWVCVGRSSDVGKPGDQRAVRVGTQGILL 79
Query: 84 CRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKD 141
RD G +HAF+N CRH +LA S V CPYH W Y LDG L AT+ TG D
Sbjct: 80 TRDGAGTLHAFYNACRHRGHELLAVDSCTNKRVVHCPYHAWVYELDGELRSATQFTGTDD 139
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI-NGIDSS 200
F+ +E+ LV L W ++ +N +A E EW+G +++++ + D
Sbjct: 140 FSKEEWPLVGLRAVEWFGWIFVNASDDAPDFE---------EWVGNLTDVVAPWDPTDMV 190
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL------ASGLQLDSYSTSLYEKVS 254
+ YT++ NWK+ +NYL+ YH P H L + + L L +
Sbjct: 191 VGE--SHSYTLQTNWKLVIENYLE-CYHCPSIHPELCRVSPPETAMGLRHTGMWLGGPLE 247
Query: 255 I-QRCESGSTEGTDDTHRLGS-------KAIYAFIYPNFMINRYGPWMDTNLVIPLAPTR 306
+ + E+ S +G R+ + IY + PN ++ ++ T+ ++PL+P
Sbjct: 248 LRENAETMSLDGRSGGERIAGISDEQARRTIYFMLAPNLLLTLQPDYVMTHRLVPLSPGE 307
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDSEQV-QMEDIILCEGVQRGLESPAYCSGRY 361
V + + + F + +D CE V +GL S Y G +
Sbjct: 308 TFVECSWLFPRHVAERPGFDPSYAAGFWDITNRQDFAACESVYQGLLSNGYRPGPF 363
>gi|254229138|ref|ZP_04922558.1| rieske 2Fe-2S family protein [Vibrio sp. Ex25]
gi|262396587|ref|YP_003288440.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Vibrio sp. Ex25]
gi|451971213|ref|ZP_21924434.1| rieske 2Fe-2S family protein [Vibrio alginolyticus E0666]
gi|151938429|gb|EDN57267.1| rieske 2Fe-2S family protein [Vibrio sp. Ex25]
gi|262340181|gb|ACY53975.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Vibrio sp. Ex25]
gi|451932786|gb|EMD80459.1| rieske 2Fe-2S family protein [Vibrio alginolyticus E0666]
Length = 395
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 51/384 (13%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY-TDQLKD----PQDFFSGRIGEVE 80
PI +A P+ YT + E +VF +W +G+ +D LK+ P DF + +
Sbjct: 20 PISEATGMPNQAYTSEEYFTFERDQVFGNTWVCIGFASDLLKNGYVMPLDFMN-----LP 74
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G++ FHNVC H L +G+ + CPYH WTY LDG L I GI
Sbjct: 75 LLMMRNRQGEVQVFHNVCSHRGMKLVHEAGEVQGMIRCPYHSWTYDLDGNLKGTPHIGGI 134
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANE--WLGGSSEIL 192
KD F ++ GL PL A W V +N+ A E + ++ E W + L
Sbjct: 135 AKHKDDRFKCEKHGLKPLRSAVWMDMVFVNLSGNA---ESFEDHIAPLEQRW----QQFL 187
Query: 193 SINGIDSSLSYLCRR-------EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DS 244
+G+ L RR E ++ NWK+ +NY + YH+P+ H L S +L D
Sbjct: 188 GEDGLG-----LLRRVNMGGNLEIEVKSNWKLAVENYCE-AYHLPWVHPSLNSYSRLEDH 241
Query: 245 YSTSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPNFMINRYGPWMD 295
Y+ E+ + Q + + T TH + S A Y ++PN ++
Sbjct: 242 YNIMFAERFAGQGSLAYNLSDTAGTHLPKFPSWPEDKLRHAEYVALFPNVLLGIQADHAF 301
Query: 296 TNLVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLE 352
++ P+ + + Y D + KD+ A + +S +V EDI EG+Q G
Sbjct: 302 AMMIEPITANKSVEHLRVFYVGDEATKDEFAACRTATVESWRVVFGEDIGAVEGMQEGRY 361
Query: 353 SPAYCSGRYAPSVEQTMYHFHSLL 376
SP + G ++P ++ + F + L
Sbjct: 362 SPGFSGGVFSPEMDVPTHFFQTWL 385
>gi|71083951|ref|YP_266671.1| dioxygenase subunit alpha [Candidatus Pelagibacter ubique HTCC1062]
gi|71063064|gb|AAZ22067.1| probable dioxygenase alpha chain [Candidatus Pelagibacter ubique
HTCC1062]
Length = 397
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 161/385 (41%), Gaps = 41/385 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PIEKA P+ YT +L++E R+F W V+G + + D + + ++ R
Sbjct: 25 PIEKAHGLPNECYTSSDYLSIERERIFKDKWTVIGVGSSVPNVGDAQPYNLLGIPLIILR 84
Query: 86 DDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D KI FHNVC H +L K+ CPYH W+Y DG L+ I G+
Sbjct: 85 DKEKKIRVFHNVCSHRGFKLLDEPCALKNVLRCPYHSWSYDFDGKLVATPHIGGLNVHET 144
Query: 145 KEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSINGI 197
++F L ++ W + +N+ + +E + ++++ + L +
Sbjct: 145 EKFDKSSSNLKEVKTKIWMDIIFININSNELEFDEYIKPLEERWSKFISKEDQKLLKHSK 204
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQR 257
D L ++CNWK +NY + YH+P+ H L ++ + S + + R
Sbjct: 205 DHGYFSL-----DVKCNWKFAIENYCE-SYHLPWIHPELN---KVSNISDHYHIQGLPNR 255
Query: 258 CESGSTEGTDDTHR--------------LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
T D + L KA Y ++PN MI G +D V L
Sbjct: 256 FAGQGTNKYDQPVKGNQSFNNFPNWPKDLFKKAEYIALFPNVMI---GLHVDHFYVFWLE 312
Query: 304 PTRCKVVFDYFLDGSLKDDKA----FIEQSLKDSE---QVQMEDIILCEGVQRGLESPAY 356
P ++ + DD A F E K++E +V +EDI EG+Q G SP Y
Sbjct: 313 PKSFSETKEHLTMYYVGDDSANGSEFTEMRKKNAEFWKEVMIEDIKAIEGMQEGRNSPVY 372
Query: 357 CSGRYAPSVEQTMYHFHSLLHCNLT 381
G ++P ++ + FH + NL
Sbjct: 373 NGGNFSPIMDNPTHEFHKWVATNLV 397
>gi|375263797|ref|YP_005026027.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Vibrio sp. EJY3]
gi|369844224|gb|AEX25052.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Vibrio sp. EJY3]
Length = 395
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 47/382 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY-TDQLKD----PQDFFSGRIGEVE 80
PI +A P+ Y + + E +VF +W +G+ +D LKD P DF + +
Sbjct: 20 PISEATGMPNDAYINEDYFTFERDQVFGNTWVCIGFASDLLKDGYVMPIDFMN-----LP 74
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G++ FHNVC H L +G+ + CPYH WTY LDG L I GI
Sbjct: 75 LLMMRNRQGEVQVFHNVCSHRGMKLVHEAGEVQGMIRCPYHSWTYDLDGNLKGTPHIGGI 134
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL PL A W V +N+ +A EE + + W L
Sbjct: 135 AQHKDDRFKCEKHGLKPLRSAIWMDMVFVNLSGDAPSFEEHIAP-LEERW----KPFLGE 189
Query: 195 NGIDSSLSYLCRR-------EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYS 246
+G+ L RR E + NWK+ +NY + YH+P+ H L S +L D Y+
Sbjct: 190 DGMG-----LLRRVNMGGNLEIEVNSNWKLAVENYCE-AYHLPWVHPSLNSYSRLEDHYN 243
Query: 247 TSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPNFMINRYGPWMDTN 297
E+ + Q + + T TH + S A Y ++PN ++
Sbjct: 244 IMFEERFAGQGSLAYNLSDTAGTHLPKFPSWPEDKLRHAEYVALFPNVLLGIQADHAFAM 303
Query: 298 LVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLESP 354
++ P++ + + Y D + KD+ A + +S +V EDI EG+Q+G SP
Sbjct: 304 MIEPISAGKSIEHLRVFYVGDEATKDEFAACRTATVESWRVVFGEDIGAVEGMQQGRHSP 363
Query: 355 AYCSGRYAPSVEQTMYHFHSLL 376
+ G ++P ++ + F + L
Sbjct: 364 GFGGGVFSPEMDVPTHFFQTWL 385
>gi|149236956|ref|XP_001524355.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451890|gb|EDK46146.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 483
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 166/393 (42%), Gaps = 58/393 (14%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD-NGK 90
T P+SW+ S LE +F++SW + + P D++S + + F + + +G+
Sbjct: 42 TLPASWWHLESVYELEKRAIFHKSWLYCTHASRFTKPGDYYSFNVTGISFFLIKSKTDGQ 101
Query: 91 IHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
I AFHNVCRH A ++ SG + C YHGW+Y DG L KA ++ F +E L
Sbjct: 102 IKAFHNVCRHRAYPVVRKESGTSTVLGCKYHGWSYNADGKLNKAPHFDNVEGFKKEENSL 161
Query: 150 VPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSLSYLCRR 207
P+ T V +N E D++V+ ++W G + ++ D Y
Sbjct: 162 FPIRTHVTPQGLVFVNFSNED------DASVIPFDDWFKGLTNEMNEFDFD-DYEYHMSY 214
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK-----VSIQRCESGS 262
E + NWK D Y + YH P AH GL S ++++Y + +I+R E
Sbjct: 215 ELHGDFNWKTLMDGYQE-CYHCPTAHPGLNSAFKMETYKVVPKNRYCRHYAAIKRNEEPE 273
Query: 263 TE-----------GTDDTHRLGSK----------------------------AIYAFIYP 283
+ G G K ++ +++P
Sbjct: 274 AKEVEDVEEETTEGKSSWFGFGKKTQAPPQQQQQQKQKQEKKKASNPGGEFDGLWVYLFP 333
Query: 284 NFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIIL 343
+ IN Y P + V+PL+ + + +D + + + A ++ + + V++ED L
Sbjct: 334 SNGINCYSPAWYSIRVLPLSAKKTTLQYDIYTKKGIDQETA--KEFVDFLQLVEIEDFNL 391
Query: 344 CEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
C+ Q+ L Y SG P E+ + ++ L+
Sbjct: 392 CQLTQKNLNQGIYSSGYLHPEKERGVLYYQGLV 424
>gi|359407349|ref|ZP_09199826.1| ring-hydroxylating dioxygenase, large terminal subunit [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677388|gb|EHI49732.1| ring-hydroxylating dioxygenase, large terminal subunit [SAR116
cluster alpha proteobacterium HIMB100]
Length = 376
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 159/380 (41%), Gaps = 39/380 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PIE A P++ YTDP+ E R+F W +G+ P + + V+ R
Sbjct: 10 PIETAQGLPNACYTDPAMFTHESDRLFISDWAAIGFGFDAPQPGCVYPVTFLGIPLVMVR 69
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF-- 142
D +G+I F NVCRH IL + CPYH W Y DG L+AT G D
Sbjct: 70 DRSGEIKVFENVCRHRGMILVNEPKRLNGPITCPYHAWAYDFDGR-LRATPHVGGPDIHE 128
Query: 143 ----NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
+ L + A W V +N+ A + + + W S++ G D
Sbjct: 129 HGSVDCSALSLNEVRSAVWRDVVYVNLSGTAA-AFAEKAAALKHRWAEFESKV-HFGGAD 186
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL---------DSYSTSL 249
S E + CNWK+ +NY + YH+P+ H L S +L DSY+
Sbjct: 187 SYF------ELEVACNWKLAVENYCE-AYHLPFVHPDLNSYSRLEDHYNILDDDSYAGQG 239
Query: 250 YEKVSIQRCESGSTEGTDD--THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ Q G D + + A Y +PN + YG D I L PT
Sbjct: 240 SHVYAPQISADGQQFPAFDGLSEKWDKAAEYCAFFPNVL---YGVHKDHAFAIVLVPTGQ 296
Query: 308 KVVFD----YFLDGSLKDDKAFIEQSLKDS---EQVQMEDIILCEGVQRGLESPAYCSGR 360
K + Y+ D + + + E K++ +QV +EDI + EG+Q G +P+Y G+
Sbjct: 297 KTTRERIALYYADETAQ-GAHYAEMRAKNAAMWKQVFVEDIGVVEGMQAGRMAPSYDGGK 355
Query: 361 YAPSVEQTMYHFHSLLHCNL 380
++ ++ +HFH + L
Sbjct: 356 FSAIMDHPTHHFHQWVASRL 375
>gi|330916152|ref|XP_003297311.1| hypothetical protein PTT_07670 [Pyrenophora teres f. teres 0-1]
gi|311330079|gb|EFQ94588.1| hypothetical protein PTT_07670 [Pyrenophora teres f. teres 0-1]
Length = 381
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 22/328 (6%)
Query: 46 LELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHA-SI 104
LE +F R W ++ + +L +P DF + + VV +D GKI+AFHNVCRH A +
Sbjct: 4 LERRAIFTRRWLILTHKSRLANPGDFLRYNVANYDIVVSKDRTGKINAFHNVCRHRAYPV 63
Query: 105 LATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT-WGPFVLL 163
+ G F C YHGW+YGL+G L KA +++F GL P+ FV +
Sbjct: 64 VEKDGGNAKIFSCKYHGWSYGLNGNLAKAPGYQELENFEKANNGLFPIHTRIDRNGFVWI 123
Query: 164 NMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYL 223
NM +A + EV + + N D + E NWK+ DN+
Sbjct: 124 NM--DAKKEPEVSWESQFDH-VDEQKRFDQFNFDDYEFDHTWNLEGPF--NWKILADNF- 177
Query: 224 DGGYHVPYAHKGLASGL-QLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIY 282
+ YH H L +GL LDSY +Y + + + + D LG + + +
Sbjct: 178 NECYHCKSTHPDLTTGLIDLDSY--DVYCSADHIQHDPNTPQDRKD---LGQEICSTYCF 232
Query: 283 PN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG-SLKDDKAFIEQSLKDSEQVQME 339
PN F + ++ +M +P +PT + ++ + + S ++D I + K +V E
Sbjct: 233 PNASFTVTQHFLFMQK--FMPKSPTESVMYYEVWRNKHSSEEDFLLISDTYK---RVMGE 287
Query: 340 DIILCEGVQRGLESPAYCSGRYAPSVEQ 367
D +LCE Q+ +E+ + +G P +E+
Sbjct: 288 DKVLCERAQKNIEAGVFVNGELHPHMEK 315
>gi|194292559|ref|YP_002008466.1| choline monooxygenase; ring hydroxylating dioxygenase alpha subunit
motif [Cupriavidus taiwanensis LMG 19424]
gi|193226463|emb|CAQ72414.1| Choline monooxygenase; ring hydroxylating dioxygenase alpha subunit
motif [Cupriavidus taiwanensis LMG 19424]
Length = 373
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 32/345 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
A T P+ +YT E +F RSW V + Q+ + + + ++ V R +G
Sbjct: 16 AYTLPAHYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATAQVAGENIFVVRGRDG 75
Query: 90 KIHAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H A + A G+GK K+ CPYH W++GLDG L+ + F
Sbjct: 76 VLRAFYNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIHVRNAENVPGFCKDNA 135
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GL P+ V + V +N+ ++D+ +A G + EI + L +
Sbjct: 136 GLTPVRVEEFCGLVFVNL--------DMDAKPLAELAAGLNDEIRARCPDVDKLVPAHKL 187
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
Y ++ NWKV DNYL+ H AH L +++++Y +E + + G T
Sbjct: 188 TYEMKANWKVVVDNYLE-CLHCQTAHPALVESIKMETYK---HEVRGLYTSQVGQTRSGS 243
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG--SLKDDKAF 325
D S A PN Y W + L + V + + +D +++ + +
Sbjct: 244 DAFTYDSDA------PNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFY 297
Query: 326 IEQSLKDSEQVQM----------EDIILCEGVQRGLESPAYCSGR 360
S +EQ Q+ ED+ + E VQRGL+S Y +G+
Sbjct: 298 FRDSTPTAEQEQLIEYYKNVLKPEDLSIVESVQRGLKSRGYRNGQ 342
>gi|114764485|ref|ZP_01443710.1| Rieske 2Fe-2S domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543052|gb|EAU46071.1| Rieske 2Fe-2S domain protein [Roseovarius sp. HTCC2601]
Length = 374
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 147/373 (39%), Gaps = 43/373 (11%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N P E A P S YT FLALE VF +SW G D LK P D+ + I
Sbjct: 13 NVATPFEAAQAMPVSVYTSEEFLALEQEHVFAKSWLCAGRADALKAPGDYLTMEIAGEPV 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+V RD G + A NVCRH SIL G G CPYH WTY LDG+L A + +
Sbjct: 73 IVLRDREGTLRAMSNVCRHRMSILLEGRGNVRTITCPYHAWTYSLDGSLRGAPAMEMNRS 132
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F + L + W +++L + + +E ++ +D +
Sbjct: 133 FCKSQTSLPAVRCVDWKGWIMLTLDPDLPEPQE------------------TLREMDDLV 174
Query: 202 SYLC--------RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ-------LDSYS 246
YL R E+ NWK+ +N+++ YH+P H G G + Y
Sbjct: 175 GYLPMQDYVEVFREEHRWNTNWKILAENFME-SYHLPMCHGGTIGGAVDLKKMTCPEGYP 233
Query: 247 TSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAF---IYPNFMINRYGPWMDTNLVIPLA 303
+ + + S D+T G + +YP+ MI + + P
Sbjct: 234 GFNFHHILKDDSIALSIAHKDNTALAGEDRYRTWLISVYPSLMITLTPGYFWYLSLTPDG 293
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKD----SEQVQMEDIILCEGVQRGLESPAYCSG 359
P K+++ L D A EQ + + V ED E V +G++S G
Sbjct: 294 PGHVKIIYGGGLHPDFAAD-AEAEQHFETLKGLLDHVNDEDKGCTERVWKGMQSRHAVPG 352
Query: 360 RYAPSVEQTMYHF 372
+ +E+ Y F
Sbjct: 353 ALS-HLERPNYEF 364
>gi|342871729|gb|EGU74203.1| hypothetical protein FOXB_15293 [Fusarium oxysporum Fo5176]
Length = 408
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 146/353 (41%), Gaps = 33/353 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY +P+ LE VF + W +V + + D+ + F +CRD G ++
Sbjct: 22 PASWYREPAMYELERRAVFSKRWLLVTHKSRFNKTGDYVRYQEAGFSFFLCRDREGNLNG 81
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN+CRH A ++ G C YHGW+YGL G L KA R + F+ GL +
Sbjct: 82 FHNICRHRAYPVITKDEGNAKILACQYHGWSYGLSGKLAKAPRFENMDTFDTDSNGLFKV 141
Query: 153 EV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEW---LGGSSEILSINGID-SSLSYLCRR 207
V FV +N D N W G+ + ++ + S+
Sbjct: 142 HVYVDHRGFVWINF----------DGNETPVPWDADFKGADKQPRLDNFNMDDYSFDHAW 191
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ---RCESGSTE 264
+ NWK DNY + YH AH G+A+ L +Y + IQ + + G
Sbjct: 192 DMNGNYNWKTLVDNY-NECYHCSVAHPGIAATSDLKTYKVET-KGGQIQHYVQDKPGKES 249
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK- 323
G D F +PN + + V+P + T + ++ + D++
Sbjct: 250 GLD--------VAPTFFFPNASVTMTTKYFYLMRVVPTSATTTSMQYEVYRHKDATDEEF 301
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
I+Q K QV+ ED LC Q+ L + Y +G E+ + +F LL
Sbjct: 302 REIDQFFK---QVESEDKDLCNAAQKNLNAGVYITGDLNSFNEKGVLYFQRLL 351
>gi|260427015|ref|ZP_05780994.1| rieske 2Fe-2S domain protein [Citreicella sp. SE45]
gi|260421507|gb|EEX14758.1| rieske 2Fe-2S domain protein [Citreicella sp. SE45]
Length = 374
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 100/226 (44%), Gaps = 27/226 (11%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N P E+A P S YT FLALE +F RSW G D LK+P D+ + I
Sbjct: 13 NVATPFERAHAMPVSVYTSEDFLALEQEHIFARSWLCAGRADALKEPGDYLTMEISGEPV 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+V RD +G + A NVCRH SIL G G CPYH WTY LDG+L A +
Sbjct: 73 IVLRDRDGALRAMSNVCRHRMSILLEGRGHVRAITCPYHAWTYNLDGSLRGAPAMDMNTS 132
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F + GL + W ++++ + + E ++ +D +
Sbjct: 133 FCKEASGLPAVRCVDWKGWIMVTLDPDLPEPHE------------------TLKEMDDLV 174
Query: 202 SYLC--------RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASG 239
YL R E+ NWK+ +N+++ YH+P H G G
Sbjct: 175 GYLPMEDYVEVFREEHRWNTNWKILAENFME-SYHLPMCHGGTIGG 219
>gi|342888920|gb|EGU88132.1| hypothetical protein FOXB_01348 [Fusarium oxysporum Fo5176]
Length = 394
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 158/354 (44%), Gaps = 31/354 (8%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY +P F LE +F +SW ++ ++ Q + + + F V RD G I
Sbjct: 4 TLPASWYREPGFYQLERRAIFSKSWILISHSCQFNETGKYVRYEMAGYPFFVIRDRAGNI 63
Query: 92 HAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL- 149
+AF N+CRH A I+ SG+ S C YHGW+Y ++G L KA R + +F+ + L
Sbjct: 64 NAFLNICRHRAFPIVHKDSGQASVLSCKYHGWSYKMNGDLAKAPRFDSVPEFDKDSYKLY 123
Query: 150 -VPLEVATWGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
V + G FV +N+ + H E E GG +E + D + +Y
Sbjct: 124 KVHTHIDKLG-FVWVNLDAAETPTHSWE--------EQFGGVTEQPRLANYDLN-NYKFD 173
Query: 207 REYTIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTE 264
+++E NWK +NY + YH P AH GLA + +K I+ E
Sbjct: 174 HTWSMEGKFNWKTLIENY-NECYHCPTAHPGLAPFFKGIRQMVYGCQKHWIEHLGGKGEE 232
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD--D 322
+ S F +PN I ++P + T + ++ + KD D
Sbjct: 233 RS-------SSVSPTFAFPNASITLTPTLFYMMSIVPTSATTSLMRYEVY---RAKDATD 282
Query: 323 KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
KAF E+ L QV+ ED L G Q L S Y +G + P VE+ + SL+
Sbjct: 283 KAFREK-LDFFAQVEGEDKWLANGAQGNLNSDTYTTGPFHPEVEEGVTFVTSLI 335
>gi|334145231|ref|YP_004538441.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp.
PP1Y]
gi|333937115|emb|CCA90474.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp.
PP1Y]
Length = 408
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 165/384 (42%), Gaps = 40/384 (10%)
Query: 16 KLVYEFNPQIPIE---KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFF 72
++ YE + + P E K P S YTD FL LE ++ R+W G+ DQL +P +F
Sbjct: 16 RMEYERDRKAPPEGFPKLPDIPGSRYTDAEFLQLEKEMMWDRAWLYAGHVDQLPNPGSWF 75
Query: 73 SGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLL 131
R +V R+ G+I AF+N C+H + L T SG+ FVC YHGW+Y LDG L
Sbjct: 76 LSRNSGAPIIVARNLAGEIKAFYNTCQHRGAPLVTEESGEGRGFVCGYHGWSYTLDGKLT 135
Query: 132 KATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI 191
D + LVP+ G + +N +A Q + E +G +
Sbjct: 136 AVRDKRDFVDLDFSCRSLVPVRCELLGSLIFINKDPDA--QPLI-------EHIGPMAAQ 186
Query: 192 LSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVP----------YAHKGLASGLQ 241
L +D L + R Y ++CN KV D +L+ YH+ H+ + L
Sbjct: 187 LEQYQLDK-LRLVDSRSYEVDCNVKVLLDAFLEV-YHLKSIHIDTVDRFLDHRAMIVSLW 244
Query: 242 LDSYSTSLYEKVSIQRCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTN 297
+ +S + G T G + +G + IYPNF++ P T
Sbjct: 245 PNGHSRMATPNRRPDWVDPG-TVGMPEIPTIGEFPAKNNVSYQIYPNFVM----PPAPTG 299
Query: 298 LVI----PLAPTRCKVVFDYFL-DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLE 352
+ I PL P R +VV + D ++ L + E++ ED+ +Q LE
Sbjct: 300 IPILQFWPLGPKRSRVVSSWLAPDHDPENPHPLWTTRLNNWERILYEDLQYAPQIQESLE 359
Query: 353 SPAYCSGRYAPSVEQTMYHFHSLL 376
SP + G E+ +YH+H L
Sbjct: 360 SPGF-RGMPLNYQERRIYHWHEEL 382
>gi|110678374|ref|YP_681381.1| Rieske (2Fe-2S) domain-containing protein [Roseobacter
denitrificans OCh 114]
gi|109454490|gb|ABG30695.1| Rieske 2Fe-2S domain protein [Roseobacter denitrificans OCh 114]
Length = 381
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 159/377 (42%), Gaps = 34/377 (9%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N +P E+A P+ YT +F+ EL +F + W VG D L P D+ S +
Sbjct: 15 NTSVPFERARAMPTEVYTSQAFVDAELEHIFRKDWYCVGRADSLVAPGDYISCELAGQPI 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
VV RD ++ A NVC H S L G G VCPYH WTY LDG L A +T +
Sbjct: 75 VVLRDREEQLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPAMTQNEG 134
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
F ++ L + W +V + + +A E S+V I G D ++
Sbjct: 135 FCKDQYELPQVRCEEWLGWVFVCLDPDAAPVAEQLSDVAQ-----------MIAGYDMTN 183
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL-QLDSY----STSLYEKVSI 255
S E+ + NWKV +N+++ YH+P H G GL +L+ + + +I
Sbjct: 184 YSEAFYEEHVWDTNWKVLAENFME-SYHLPVCHAGTIGGLSRLEDMICPPGGAAFNYHTI 242
Query: 256 QRCESGSTEGTDDTHRL-----GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ ES T + + Y +YP+ MI + + P P + +
Sbjct: 243 LKDESLRIAMAHPTRNVRLEGDARRTTYLLALYPSLMITLTPGYFWYLSLHPKGPGQVHI 302
Query: 310 VF------DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
F D+ D +++ A ++ L D V +ED E V RGL S A G +
Sbjct: 303 RFGGGMSNDFADDPDTEENFAALKTLLDD---VNIEDRGCTEKVYRGLCSDAATPGHLS- 358
Query: 364 SVEQTMYHFHSLLHCNL 380
+E+ Y F L +
Sbjct: 359 HLERPNYDFAQYLMAKI 375
>gi|413960728|ref|ZP_11399957.1| (Fe-S)-binding protein [Burkholderia sp. SJ98]
gi|413931442|gb|EKS70728.1| (Fe-S)-binding protein [Burkholderia sp. SJ98]
Length = 376
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 11 LVAAQKLVYEF--NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
++A L+ + N + P A P YT P FL+LE +F WQ VG LK+P
Sbjct: 1 MIAVDTLIDQLRSNCERPFSDAHAMPPGVYTSPDFLSLEEREIFAHEWQCVGRASALKEP 60
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG 128
D+ + +IG VV RD+ ++ A NVC H S+L G G K VCPYH W+YGLDG
Sbjct: 61 GDYLTAQIGAQPIVVLRDEQMQLKAMSNVCLHRMSVLLEGRGNKRRIVCPYHAWSYGLDG 120
Query: 129 TLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGS 188
L A + + F + + L + W ++ + + + A VA + L
Sbjct: 121 ELKGAPLMDRQEGFCKESYRLPAVRCEEWQGWIYVTLDESA--------PPVATQ-LAEL 171
Query: 189 SEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKG 235
SE++ G+ + E+ + NWK+ +N+++ YH+P H+
Sbjct: 172 SELIGAYGMTDYIETFY-EEHVWDTNWKILAENFME-SYHLPMLHRA 216
>gi|148555168|ref|YP_001262750.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148500358|gb|ABQ68612.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 406
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 157/362 (43%), Gaps = 35/362 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP FLALE R++ R+W G+ DQL DP +F R +V RD G + A
Sbjct: 36 PGRRYVDPDFLALEKERMWKRAWLYAGHVDQLPDPGSWFLTRNTGSPVIVVRDLQGDLRA 95
Query: 94 FHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F N C+H + L T +G+ FVC YHGW+Y LDG L D + LVP+
Sbjct: 96 FFNTCQHRGAPLVTAEAGEARGFVCGYHGWSYTLDGKLTAVRDKRDFVDLDFSCRSLVPV 155
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
T G + +N EA Q +D +G ++ L +D L + R Y +
Sbjct: 156 RCETLGNLIFVNEDAEA--QPLIDH-------IGPMAKELDQYQLD-RLRLVDSRSYEVG 205
Query: 213 CNWKVFCDNYLDGGYHVP----------YAHKGLASGLQLDSYSTSLYEKVSIQRCESGS 262
CN KV D +L+ YH+ H+G+ L + +S + + G+
Sbjct: 206 CNVKVLLDAFLE-VYHIKSIHQHTVDRFLDHRGMIVTLWPNGHSRMVTPNSRPDWKDPGT 264
Query: 263 --TEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVI----PLAPTRCKVVFDYF- 314
D L + ++ IYPNF++ P D+ + + P P +VV +
Sbjct: 265 IGMPKIDTVTDLPANNNVSYQIYPNFVM----PPSDSGIPLLQFWPTGPRSSRVVSSWIG 320
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
D ++ + + + E++ ED+ +Q LES + G E+ +YH+H
Sbjct: 321 PDHDPENPHPMWAKRIANWERILYEDLQFAPQIQESLESDGF-RGMPLNYQERRIYHWHE 379
Query: 375 LL 376
L
Sbjct: 380 EL 381
>gi|325002226|ref|ZP_08123338.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Pseudonocardia sp. P1]
Length = 381
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 157/361 (43%), Gaps = 24/361 (6%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP E +F+ W + L P F + +IG +V R +G + AF N
Sbjct: 27 YYTDPDIFRAEQDSIFHTGWFCSVLSADLDRPGRFETVQIGRESVIVTRGRDGAVRAFLN 86
Query: 97 VCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
VCRH + L T G K+S F CPYH WTYGLDG L+ +T + D + E+GL +
Sbjct: 87 VCRHRGARLCTEESGEVKRS-FQCPYHAWTYGLDGKLVAGPNLTAMPDVDKVEYGLHTVH 145
Query: 154 VATWGPFVLLNMGKEAVHQEE-VDSNVVANEWLGGSSEILSINGIDSSLSYLCRR-EYTI 211
V W + L + ++ EE V +V A LG I+ G D L RR Y +
Sbjct: 146 VREWLGYAWLCLAEDPPPFEETVIGDVTAR--LGSPDAIV---GYDVENLKLGRRISYDV 200
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLDSYSTSLYE-KVSIQRCESGST 263
+ NWK +N+++ YH H L A GL + E +Q +
Sbjct: 201 KANWKQIVENFME-CYHCATIHPELTEVLPEFADGLAAQYFVGHGAEFGAEVQGFTVDGS 259
Query: 264 EGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
G +G+ + YA + P IN + + + PL R VV D+ +
Sbjct: 260 AGLAPIPGVGADQDRRYYAITVRPQVFINLVPDHVVFHRMFPLTAERTMVVCDWLYLPEV 319
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCN 379
D A I++S++ +V ++D CE Q ++S +Y G E + FH +
Sbjct: 320 VDSGADIDRSVELFHRVNLQDFEACERCQVAMDSRSYRDGGVLVPSEHHIGEFHDWVRER 379
Query: 380 L 380
L
Sbjct: 380 L 380
>gi|398925406|ref|ZP_10661842.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM48]
gi|398172047|gb|EJM59929.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM48]
Length = 389
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 160/370 (43%), Gaps = 33/370 (8%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+A T PS ++ D + E +F +W V G+ + +P + + + VV ++
Sbjct: 22 EEAFTLPSRYFYDETLFKAERDNIFMHAWHVAGHVSEFAEPGQYVVTDLFDQSVVVAKNR 81
Query: 88 NGKIHAFHNVCRHHAS-ILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVK 145
G+IHAFHNVC+H + +L G V C YH W Y +DG+L A R +K+F ++
Sbjct: 82 QGQIHAFHNVCQHRGNRLLEERRGTTGGVVRCAYHSWCYEMDGSLRSAPRCEKMKNFELQ 141
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+F + + G F+ N+ A ++ + G E+ + + + +
Sbjct: 142 QFNIPQIRTEEMGGFIYFNLDPAAPSLRDL--------FPGADEEMRRVFPDLADMRLIE 193
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYA---HKGLASGLQLDSYSTSLYEK--VSIQRCES 260
++ + NWKV DN ++G YH + H LA + Y S + I
Sbjct: 194 EQDVIVPANWKVIMDNSIEG-YHFKLSGPCHIDLARLIDFKGYQLSKRDNWWTYIAPANL 252
Query: 261 GSTEGTDDTHRLGSKAIYAF----IYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
TE R F ++PN F + ++ + ++IPL R + F Y+
Sbjct: 253 SVTEAYGVPLRKDLNPDECFFNIGMWPNNTFYTFPFSEFLGSFIMIPLDAERSLLRFGYY 312
Query: 315 LDGSLKDDKAFIEQSLKD--SEQVQMEDIILCEGVQRGLESPAYCSGRY------APSVE 366
S + A + S +E + EDI L VQ+GL S Y GRY + E
Sbjct: 313 ---SSNAETAAVSTSCMKWMNEDLGPEDIALNISVQKGLHSLGYDQGRYMIDAQRSNESE 369
Query: 367 QTMYHFHSLL 376
++HFH L+
Sbjct: 370 HLVHHFHRLV 379
>gi|254477824|ref|ZP_05091209.1| hypothetical protein RR11_1 [Ruegeria sp. R11]
gi|214028409|gb|EEB69245.1| hypothetical protein RR11_1 [Ruegeria sp. R11]
Length = 384
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 161/371 (43%), Gaps = 35/371 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P+ Y DP+ A E V + +W +G+ + + D + ++ R
Sbjct: 13 PVSVANGLPNEHYVDPAVFAEERESVLFANWSGIGFGKDIPEAGDAKPVDFLGMPLLLVR 72
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
D NG I F N CRH IL K + CPYH W YGL+G L + G
Sbjct: 73 DRNGDIGVFQNTCRHRGMILVDKPQKIRGAIRCPYHSWCYGLNGELRTTPHVGGPGQNTH 132
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+D + + GLV + W + +N+ A EEV ++++ E + + G S
Sbjct: 133 EDVQMDKLGLVRVRSHVWRDVIYVNVDGNAPAFEEVHADLL--ERWAEFEKPIHHGGEAS 190
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQ-- 256
S + + NWK+ +NY + YH+P+ H GL S +L D Y+ + K S Q
Sbjct: 191 SF------KLEVATNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYNIEVLGKYSGQGT 243
Query: 257 ------RCESGSTEGTDD--THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+ E G+T D + + A Y +YPN ++ G D I L P C+
Sbjct: 244 LVYRQLKDEDGTTMADFDGLSDKWDEGAEYVAVYPNVLL---GVQRDHCFAIVLEPKDCE 300
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQM------EDIILCEGVQRGLESPAYCSGRYA 362
++ + ++ E + Q+ ED+ + EG+Q+G + GR++
Sbjct: 301 NTVEHIELYYARSERETPEFDGLRASNAQLWKTVFEEDVFVVEGMQKGRHGVLFDGGRFS 360
Query: 363 PSVEQTMYHFH 373
P+++ ++FH
Sbjct: 361 PAMDGPTHNFH 371
>gi|452958627|gb|EME63980.1| ring hydroxylating dioxygenase subunit [Amycolatopsis decaplanina
DSM 44594]
Length = 370
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 151/357 (42%), Gaps = 20/357 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+YTDP+ A E ++F R W L DF + RIG +V R +G + AF
Sbjct: 13 GGYYTDPAIFAAEQEKIFERRWFCAVRAADLPSAGDFRTVRIGRESVLVSRGRDGGLRAF 72
Query: 95 HNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
NVCRH + L T G+ K++ F CPYH WTYGLDG L+ A + + + E+GL
Sbjct: 73 LNVCRHRGARLCTEESGTVKRA-FQCPYHAWTYGLDGKLIAAPNLANLPGIDRSEYGLHA 131
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ + W + + + E D E L G E + G+ LS R Y +
Sbjct: 132 VHLREWLGYAWACLATDPP-SFEADVEGAVQERL-GDLESIERYGL-GKLSVGRRITYDV 188
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSI---QRCESGSTEGT 266
+ NWK+ +N+++ YH H L L D Y+ Y Q + + +G
Sbjct: 189 KANWKLIVENFME-CYHCATIHPELTEVLPEFTDGYAAQYYVGHGAEFGQDVDGFTIDGG 247
Query: 267 DDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
RL A YA I P +N + + + PLAP R V D+ +
Sbjct: 248 PGFDRLDGVANEQDRRYYAITIRPQVFVNLVPDHVIFHRMYPLAPDRTVVECDWLYSEEV 307
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ +S++ +V +D CE Q + S AY G E + FHS L
Sbjct: 308 VASGRDVSRSVELFHRVNEQDFDACERCQPAMASRAYRGGGVLMPSEHHIGEFHSWL 364
>gi|254487530|ref|ZP_05100735.1| rieske (2Fe-2S) protein [Roseobacter sp. GAI101]
gi|214044399|gb|EEB85037.1| rieske (2Fe-2S) protein [Roseobacter sp. GAI101]
Length = 382
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 164/377 (43%), Gaps = 33/377 (8%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PI +A P++ YTDP+ A E V + +W + + + D + ++ R
Sbjct: 14 PIAQANGLPNAHYTDPAVFAEERQAVLFNNWPGLAVASDVPEIGDAVPLDFLGMPLLIVR 73
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI----- 139
D G++ F N CRH IL K + CPYH W Y DG L+ + G
Sbjct: 74 DRQGQVRVFQNTCRHRGMILVDAPRKIDGAIRCPYHSWCYSTDGRLVSTPHVGGPGQNTH 133
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+ + GLV + W + +N+ A+ E+ +++++A W + L G DS
Sbjct: 134 EGIDRALLGLVEIRSHVWMDVIWINISGTALPFEQANADLLA-RW-AEFDKPLHHGGADS 191
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQ-R 257
R + ++ CNWK+ +NY + YH+P+ H GL S +L D Y K S Q
Sbjct: 192 ------RFQLSVNCNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYHIENTGKFSGQGT 244
Query: 258 CESGSTEGTDD---------THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+G DD + + + A Y YPN ++ + +++P P +
Sbjct: 245 LVYRQLKGEDDKSFPDFDGLSDKWDTAAEYVTAYPNVLLGVHRDHSFAIILVPEGPEKTT 304
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQM---EDIILCEGVQRGLESPAYCSGRYAPSV 365
+ D E ++++Q ++ EDI + EG+QRG + + GR++P++
Sbjct: 305 ENIHIYYAAPNTDP----ELRARNTDQWKLVFEEDIFVVEGMQRGRHAVQFDGGRFSPAM 360
Query: 366 EQTMYHFHSLLHCNLTN 382
+ + FH + L +
Sbjct: 361 DGPTHMFHDWVASQLQD 377
>gi|91780455|ref|YP_555662.1| putative Rieske-type ring dioxygenase [Burkholderia xenovorans
LB400]
gi|91693115|gb|ABE36312.1| Putative Rieske-type ring dioxygenase [Burkholderia xenovorans
LB400]
Length = 387
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 153/360 (42%), Gaps = 24/360 (6%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q P+ +A P Y DP L E R+F + W + + D+L +P DF + + + ++
Sbjct: 25 QRPLNEASHAPGYIYGDPDVLRREKERIFMKDWLCIAHVDELPNPGDFVTHTVIDEPVLI 84
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
R+ +G + AF+N CRH +A G G F CPYH W+Y LDG L+ + + F+
Sbjct: 85 VRNRSGVLQAFYNQCRHRGVEVAEGRGNAKIFKCPYHAWSYDLDGKLIGVPFMKEAQGFD 144
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
K L P+ + TWG F+ ++ +A E + S + E G L
Sbjct: 145 QKNCSLKPVRLDTWGGFIHISFDPDA---EPLSSYMAEYEQEFGMLR-------QGELRL 194
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS---YSTSLYEKVSIQ-RCE 259
R E +CNWK +N +D YHV H Q S Y + SI R +
Sbjct: 195 GLRWETDFDCNWKFVYENLMD-IYHVGVTHADTIGRYQDQSSYRYLQLPRGRASIHYRAK 253
Query: 260 SGSTEGTDDTHRL-----GSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+ S G+ RL S A ++ PN + ++ P A R V +
Sbjct: 254 TMSETGSSLFGRLPWIDDDSFARIGYLPPNLTMLARCDYVRPVTHWPTAVNRTHSVAYFL 313
Query: 315 LDGSLKDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
D F I+ +K EQV ED + +QR + + + GR + +E ++H
Sbjct: 314 FPEDKIADPQFQEKIQTYVKFVEQVLDEDRGMILSLQRAMNTRGFEPGRMS-FMENAIHH 372
>gi|91223316|ref|ZP_01258582.1| Rieske 2Fe-2S family protein [Vibrio alginolyticus 12G01]
gi|91192129|gb|EAS78392.1| Rieske 2Fe-2S family protein [Vibrio alginolyticus 12G01]
Length = 395
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 170/382 (44%), Gaps = 47/382 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGY-TDQLKD----PQDFFSGRIGEVE 80
PI +A P+ YT + E +VF +W +G+ +D L++ P DF + +
Sbjct: 20 PISEATGMPNQAYTSEEYFTFERDQVFGNTWVCIGFASDLLRNGYVMPLDFMN-----LP 74
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
++ R+ G++ FHNVC H L +G+ + CPYH WTY LDG L I GI
Sbjct: 75 LLMMRNRQGEVQVFHNVCSHRGMKLVHEAGEVQGMIRCPYHSWTYDLDGNLKGTPHIGGI 134
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL PL A W V +N+ A EE + + W + L
Sbjct: 135 AKHKDDRFKCEKHGLKPLRSAVWMDMVFVNLSGNAESFEEHIAP-LEQRW----QQFLGE 189
Query: 195 NGIDSSLSYLCRR-------EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYS 246
G+ L RR E ++ NWK+ +NY + YH+P+ H L S +L D Y+
Sbjct: 190 EGLG-----LLRRVNMGGNLEIEVKSNWKLAVENYCE-AYHLPWVHPSLNSYSRLEDHYN 243
Query: 247 TSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPNFMINRYGPWMDTN 297
E+ + Q + + T TH + S A Y ++PN ++
Sbjct: 244 IMFAERFAGQGSLAYNLSDTAGTHLPKFPSWPEDKLRHAEYVALFPNVLLGIQADHAFAM 303
Query: 298 LVIPLAPTRC--KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLESP 354
++ P+ + + Y D + KD+ A + +S +V EDI EG+Q G SP
Sbjct: 304 MIEPITANKSVEHLRVFYVGDEATKDEFAACRTATVESWRVVFGEDIGAVEGMQEGRYSP 363
Query: 355 AYCSGRYAPSVEQTMYHFHSLL 376
+ G ++P ++ + F + L
Sbjct: 364 GFGGGVFSPEMDVPTHFFQTWL 385
>gi|433648429|ref|YP_007293431.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
gi|433298206|gb|AGB24026.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
Length = 373
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 162/373 (43%), Gaps = 34/373 (9%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P S+YTDP+ A+E ++F W + L F + ++G ++ R G++
Sbjct: 13 TLPGSYYTDPTIFAMEQTQIFESMWFCAVRSADLDKAGAFKTVQVGNESVLITRSRTGQV 72
Query: 92 HAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF NVCRH + L T G K++ F CPYH WTY LDG L+ A +T + D + E+G
Sbjct: 73 RAFFNVCRHRGAQLCTEESGETKRA-FQCPYHAWTYDLDGKLIAAPNLTKMPDIDRVEYG 131
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS-LSYLCRR 207
L + + W +V + + ++ ++ V++ LG E+ I+ D+ LS R
Sbjct: 132 LRRIAIKEWLGYVWVCLAEDPPSFDDTVRKDVSDR-LG---EVALIDHYDAEHLSVGRRI 187
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
Y ++ NWK+ +N+++ YH H L L + +++Q E D
Sbjct: 188 RYDVKANWKLIIENFME-CYHCATIHPELTEVL------PEFADGLAVQYHVGHGAEFAD 240
Query: 268 DTHRL---GSKAI--------------YAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
D GS+ + YA I P +N + + + P+A R V
Sbjct: 241 DVRGFTIDGSQGLDQIPGVTAEQDRRYYAITIKPQVFVNLVPDHVIVHRMFPMAADRTVV 300
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ + + + +S++ +V +D CE Q + S Y G E +
Sbjct: 301 ECDWLYLPHVVESGKDVSRSVELFHRVNEQDFAACERCQPAMSSRTYRDGGVLVPSEHHI 360
Query: 370 YHFHSLLHCNLTN 382
FH+ L LT
Sbjct: 361 GEFHNWLQAKLTR 373
>gi|429847887|gb|ELA23435.1| iron-sulfur cluster-binding rieske family domain protein
[Colletotrichum gloeosporioides Nara gc5]
Length = 405
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 20/356 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY +P+F E VF + W ++ + +L + F + +F + +D G IHA
Sbjct: 13 PASWYREPAFFDFEKRAVFSKQWLMITHRSRLPEAGSFLRFEMAGFDFFLIKDRQGGIHA 72
Query: 94 FHNVCRHHASILATGS----GKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
FHNVCRH A + GKK C YHGW+YGL G L KA + + DF +++ L
Sbjct: 73 FHNVCRHRAYPILVDKDGREGKKLILSCGYHGWSYGLSGKLAKAPKFDEVDDFRKEDYSL 132
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
+ + +G V+ + D+ + E G+ E + Y+ R +
Sbjct: 133 FSIHTH------IDKLGLIWVNFDASDNPIPWKELNEGTDEQERFQDFNLD-DYVYERTW 185
Query: 210 TI--ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS--TSLYEKVSIQRCESGSTEG 265
T + NWK+ +NY + YH +H G+ LD YS T K ++ +
Sbjct: 186 TTNGDYNWKLVGENY-NECYHCQASHPGITKITNLDRYSVETKGPNKGRMEHFPPNRDDI 244
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGP-WMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA 324
D + + F YPN +N P W L+ + T V +Y + + +
Sbjct: 245 KPDDVQFFGNGAFTFNYPNTSLNLSTPYWF---LMRVVPKTPTTVTTEYEVYRNKNSPRE 301
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
+++ + E +++ED L GVQ+ L + + +G E F LL +L
Sbjct: 302 HFDRAGEFFEGIEIEDFHLMNGVQKNLVTNVFVNGPLHSKRESGTMAFKRLLKKDL 357
>gi|393220881|gb|EJD06366.1| Rieske [2Fe-2S] domain protein [Fomitiporia mediterranea MF3/22]
Length = 413
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 147/355 (41%), Gaps = 28/355 (7%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P+ W D S LE +F + W + +T P D+ SG ++ +
Sbjct: 29 LPASDHSTLPAQWMRDESIFELEKRAIFSKVWLLTSHTSHFSKPGDYISGN-NVFDYFII 87
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFN 143
RD + AFHNVCRH A + + S S + C YHGW+Y G L+KA + + F+
Sbjct: 88 RDKDDNYQAFHNVCRHRAYPVVSKSEGSSLVIGCKYHGWSYNAKGDLVKAPKFDTVPGFD 147
Query: 144 VKEFGLVPL--EVATWGPFVLLNMGKEAVHQEEVDSNVVANE--WLGGSSEILSINGIDS 199
K GL + V T G F+ LN + N V E + +E +
Sbjct: 148 KKANGLFKIHTHVTTQG-FIFLNF--------DASPNPVPFEDHFAQLPAEWKDTDFTQY 198
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
Y R+ NWK D Y + YH AH G + L L Y +++
Sbjct: 199 EPYYY--RQVVGNFNWKTMSDGYQE-CYHCTIAHPGFSQSLDLTGY--------TVEPLS 247
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSL 319
+ + K + FI+P + +PL+ T+ ++ FD F +
Sbjct: 248 NSARHTVPLKSNPEEKQSFVFIFPTHGVTVAPEVWYILRSVPLSATKTRMEFDVFRRKGV 307
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
++ + ++ K QVQ ED LCE QRGL + Y G P E+ + ++ S
Sbjct: 308 PEE--VLLENRKFYTQVQQEDFDLCENAQRGLNAGIYHKGVLHPEEEKGVLYYQS 360
>gi|126740741|ref|ZP_01756427.1| Rieske 2Fe-2S domain protein [Roseobacter sp. SK209-2-6]
gi|126718256|gb|EBA14972.1| Rieske 2Fe-2S domain protein [Roseobacter sp. SK209-2-6]
Length = 394
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 164/378 (43%), Gaps = 35/378 (9%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N P E+A P YT FL EL +F + W VG D L +P + + +
Sbjct: 24 NTAQPFEQARAMPPEVYTSQEFLDQELAHIFAKDWFCVGRADALAEPGSYTTCDLAGQPI 83
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+V RD +G++ NVC H S L G GK VCPYH WTY LDG+L A +T +
Sbjct: 84 LVMRDRDGELRGLSNVCLHRMSTLLHGRGKTRAIVCPYHAWTYNLDGSLRGAPAMTLNEG 143
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
F ++ L + W +V + + + D++ VA E L +E+++ G D ++
Sbjct: 144 FCKDQYQLPKVRCEEWLGWVFVTLNQ--------DASPVA-EQLSQVAEMVA--GYDMTN 192
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL-QLD-----------SYSTS 248
+ E+ + NWKV +N+++ YH+P H G GL +L+ +Y T
Sbjct: 193 YTEAFYEEHVWDTNWKVLAENFME-SYHLPVCHAGTIGGLSKLEDMVCPPGLPAFNYHTI 251
Query: 249 LYEK-VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
L E+ + I +T D R +YP+ +I + + P P +
Sbjct: 252 LKEESLKIAMAHEKNTRLKGDERR---TTYLLALYPSLLITLTPGYFWYLSLHPNGPGQV 308
Query: 308 KVVFDYFLDGSLKDDKAFIEQSLKD----SEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
+ F + DD +EQ+ +D + V +ED E V RGL S G +
Sbjct: 309 HIRFGGGMSNDFADDPE-VEQNFQDLKALLDDVNIEDRGCTEKVFRGLSSGMAEPGHLS- 366
Query: 364 SVEQTMYHFHSLLHCNLT 381
+E+ Y F L +
Sbjct: 367 HLERPNYDFAQYLMAKIV 384
>gi|374332516|ref|YP_005082700.1| Rieske 2Fe-2S domain protein [Pseudovibrio sp. FO-BEG1]
gi|359345304|gb|AEV38678.1| Rieske 2Fe-2S domain protein [Pseudovibrio sp. FO-BEG1]
Length = 394
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 158/365 (43%), Gaps = 39/365 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y DP+ A E V + +W +G+ + + D + ++ RD G+I
Sbjct: 31 PNEHYIDPAIFAEEKRSVLFANWSGIGFGKDIPEAGDAKPINFLGMPLLMVRDRTGEIGV 90
Query: 94 FHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI-----KDFNVKEF 147
F N CRH IL K + CPYH W YGL+G L I G +D ++KE
Sbjct: 91 FQNTCRHRGMILVEEPTKIRGAIRCPYHSWCYGLNGELRTTPHIGGPGQNTHEDVDLKEL 150
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GL + W V +N+ + A EE ++++ W I G +S
Sbjct: 151 GLTRIRSHIWRDVVFVNIDETAPEFEEAHADLI-ERWKEFEQPIFH-GGETASF------ 202
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQ--------RC 258
+ + CNWK+ +NY + YH+P+ H GL S +L D Y+ K S Q +
Sbjct: 203 KLNVNCNWKLAVENYCE-SYHLPWVHPGLNSYSRLEDHYNIEKEGKYSGQGSLVYRQLKS 261
Query: 259 ESGST----EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY- 313
E G G D GS+ Y +YPN ++ G D I L P + ++
Sbjct: 262 EDGRVLPDFNGLSDKWDEGSE--YVAVYPNVLL---GVQRDHVFAIILEPVDLENTVEHI 316
Query: 314 --FLDGSLKDDKAFIEQSLKDS---EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
+ +D + ++++ + V EDI + EG+Q+G + GR++P+++
Sbjct: 317 ELYYSKPPQDAPELDDLRVENAGLWKTVFKEDIFVVEGMQKGRHGELFDGGRFSPAMDGP 376
Query: 369 MYHFH 373
+ FH
Sbjct: 377 THAFH 381
>gi|420249643|ref|ZP_14752882.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398063529|gb|EJL55255.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 382
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 157/374 (41%), Gaps = 37/374 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P +A + P YT P FLALE +F R WQ VG LK+ D+ + RIG+ VV R
Sbjct: 24 PFSEARSMPPGVYTSPEFLALEERDIFSREWQCVGRASALKNAGDYLTARIGDQPIVVLR 83
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D+ ++ A NVC H S+L G G VCPYH W Y LDG L A + + F +
Sbjct: 84 DEQMQLKAMSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYSLDGALKGAPLMDRQEGFCKE 143
Query: 146 EFGLVPLEVATWGPFVLLNMGKEA--VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ L + W ++ + + A +H D N E++ G+ +
Sbjct: 144 SYRLPAVRCEEWQGWIYVTRDENALPIHARLADLN-----------ELIGAYGMSDYIET 192
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQLDSYSTSL----YEKVSIQ 256
E+ + NWK+ +N+++ YH+P H+ G S L+ L Y ++ +
Sbjct: 193 FY-EEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMECPPGLPAFNYHWITKE 250
Query: 257 RCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF- 311
D+T G + A+ A IYP ++ + ++ P R + F
Sbjct: 251 ASLPIGNAHPDNTRLTGHWRKTTALLA-IYPTHLVTLTPGYFWYLVLQPEGVGRVHIRFG 309
Query: 312 -----DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
++ D A ++Q L D V ED E V RG+ +P G + +E
Sbjct: 310 GGLAPEFVADPQAHAYMATLKQLLDD---VNAEDRRGVEAVFRGVHAPLAKPGHLS-HLE 365
Query: 367 QTMYHFHSLLHCNL 380
+ Y F L +
Sbjct: 366 RPNYDFARYLAAKI 379
>gi|284045455|ref|YP_003395795.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Conexibacter
woesei DSM 14684]
gi|283949676|gb|ADB52420.1| Rieske (2Fe-2S) iron-sulphur domain protein [Conexibacter woesei
DSM 14684]
Length = 383
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 161/374 (43%), Gaps = 47/374 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ +A P YTDP E ++F R W V + +++P D+ + F++ R
Sbjct: 22 PVSEARGMPPRVYTDPEIFEAEKDKIFNREWMAVLHESTVRNPGDYRVVELLGQSFLIVR 81
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G++ FHN+CRH + +A G G S F CPYH WTY L G+L+ A + + V+
Sbjct: 82 GTDGELRGFHNICRHRGAKVAVGEGNCSKFRCPYHTWTYDLRGSLIGAPTMAHV----VR 137
Query: 146 E-FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV-----VANEWLGGSSEILSINGIDS 199
E GLV L + TW FV +N+ +A E + S V V WL D
Sbjct: 138 EGIGLVDLRIDTWLGFVFINIDGQA---EPLASKVSRLDDVLAPWL------------DV 182
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAH----KGLASG-LQLDSYSTSLYEKVS 254
L + Y NWK+ +N ++ GYHV H + +A G L S S +E +
Sbjct: 183 DLEVVYELPYPGNWNWKLTYENTIE-GYHVIGTHLDSAQPIAPGELTFTSTSDDDFETFT 241
Query: 255 ----------IQRCESGSTEGTDDTHR-LGSKAIYAFIYPNFMINRYGPWMDTNLVIP-L 302
R E+G + D + +A + ++PNF+ + + +V+P
Sbjct: 242 DFRMPYAAGMTMRDETGGSVPLDGVPSWVDEEARFYVVWPNFLFSLAPENLTGYIVLPGK 301
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKD---SEQVQMEDIILCEGVQRGLESPAYCSG 359
P V+ F E S VQ ED CE + + S ++ G
Sbjct: 302 GPGEVTFVWCNVARPETLQMPNFAEYKAAQELWSTTVQTEDQYPCETMWENMHSDSFIPG 361
Query: 360 RYAPSVEQTMYHFH 373
YA E+ +YHF+
Sbjct: 362 PYAEG-ERAVYHFN 374
>gi|383648854|ref|ZP_09959260.1| [2Fe-2S] protein [Streptomyces chartreusis NRRL 12338]
Length = 380
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 158/372 (42%), Gaps = 22/372 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P YTDP LE +F W +L P F + +G +V
Sbjct: 6 LPESLIATLPGDHYTDPEIFRLEQEHIFESMWFCAARASELAKPGAFRTVDVGRESILVT 65
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R +G + AF NVCRH + L T SG+ K F CPYH WTY L G L+ A +T + D
Sbjct: 66 RSRDGSVRAFFNVCRHRGAKLCTQESGEVKRAFQCPYHAWTYDLSGKLVAAPNLTRMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKE-AVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
EFGL + V W +V + + + + V ++VVA LG ++ SI D S
Sbjct: 126 GRTEFGLASVAVREWLGYVWVCLAENPPSFERSVIADVVAR--LG---DVESIERYDVES 180
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ-- 256
L R Y ++ NWK+ +N+++ YH H L L D Y+ Y +
Sbjct: 181 LEVGRRIVYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFG 239
Query: 257 -RCESGSTEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+ + +G+ R+ + + YA + P IN + + + P+A R
Sbjct: 240 SEVQGFTVDGSQGLDRIPTVSEEQDRRYYAITVRPQVFINLVPDHVIFHRMFPVAVDRTI 299
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
V D+ + + +S++ ++V +D CE Q + S Y G E
Sbjct: 300 VECDWLYLKDVVAGGRDVSRSVELFDRVNRQDFDACERCQPAMSSRLYAKGGVLVPSEHH 359
Query: 369 MYHFHSLLHCNL 380
+ FH +H L
Sbjct: 360 IGEFHDWIHDRL 371
>gi|188026520|ref|ZP_02962415.2| hypothetical protein PROSTU_04534 [Providencia stuartii ATCC 25827]
gi|188019251|gb|EDU57291.1| hypothetical protein PROSTU_04534 [Providencia stuartii ATCC 25827]
Length = 376
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 165/380 (43%), Gaps = 24/380 (6%)
Query: 11 LVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD 70
+++ K V N + I+ A T P+ +YT E +F SW V ++ ++K+
Sbjct: 1 MMSNAKKVISINDHLDIDNAWTIPARYYTSDDVFEFEKENIFANSWVCVAHSSEVKEKNA 60
Query: 71 FFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDG 128
+ + ++ V+ R + + F+NVC H L +G SGK K+ CPYH W + LDG
Sbjct: 61 YITRQLIGESLVIVRGRDDVLRGFYNVCPHRGHQLISGESGKMKNVITCPYHAWAFKLDG 120
Query: 129 TLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGS 188
L AT + +F L V F+ +N+ E + + + G +
Sbjct: 121 QLAHATNCENVNNFEADAMSLSSFHVIEHAGFIYINLT-------EGEPQPIEEQLPGLA 173
Query: 189 SEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTS 248
+++ + L R NWK DNY++ YH P H AS + ++ Y
Sbjct: 174 AKMEEACSVIRDLKLAARFVSHTPANWKTIVDNYIE-CYHCPTNHVSFASSVDVNVYEHQ 232
Query: 249 LYEKVSIQRCESGSTEGTD--DTHRLGSKAIYAFIYPNFMINRY--GPWMDTNLVIPLAP 304
L E ++Q ++ +E + D + + +I+P+ M N G +M P++
Sbjct: 233 LNENWTVQIGQAKPSESSYQFDESVVNPRFFGFWIWPSTMFNMPPGGDFMTVIYEFPVSA 292
Query: 305 TRCKVVFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYA 362
+D YFL+ L + + + + + + ED+ L E VQ+GL S Y GR
Sbjct: 293 GETLQHYDIYFLNEELTEYQKNLVEWYRTV--FRPEDLRLVESVQKGLRSRGYRGQGRIM 350
Query: 363 PSVEQT------MYHFHSLL 376
+++ + HFH L+
Sbjct: 351 ADRQRSGISEHGVAHFHKLI 370
>gi|254501539|ref|ZP_05113690.1| Rieske (2Fe-2S) domain protein [Labrenzia alexandrii DFL-11]
gi|222437610|gb|EEE44289.1| Rieske (2Fe-2S) domain protein [Labrenzia alexandrii DFL-11]
Length = 365
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 139/333 (41%), Gaps = 19/333 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDPS E + R+WQ G+T L+ P D+F+ I V +D G + A+
Sbjct: 18 ARYYTDPSHFEREKDGLLARTWQFAGHTSLLQKPGDYFTIDIAGESIVCLKDREGVLRAY 77
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
NVC+H A L G G VCPYH WTY L G L + + F+ + L +++
Sbjct: 78 FNVCQHRAHQLVQGEGNTKLLVCPYHSWTYELTGGLRSGPNVKSVPGFDRNQICLSTVQI 137
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECN 214
+ F+ +N+ A + NV E+ S L L E CN
Sbjct: 138 EDFCGFLFVNLDPNAKPMDAWFPNV--------REELRSFVPHIDRLQPLEWVEIEENCN 189
Query: 215 WKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTS-----LYEKVSIQRCESGSTEGTDD 268
WKV +NY + YH P H A+G ++ ++Y L Q E + E D
Sbjct: 190 WKVSVENYSE-CYHCPINHPTFATGVIKPETYDIQPQGYCLRHTTECQNLERMTYEIDLD 248
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD--YFLDGSLKDDKAFI 326
++ F++P F Y + VV+ Y +DG D +
Sbjct: 249 SNEHAGDYSSWFLWPLFSFQVYPGNILNTYHWRAVDVDHVVVWRGWYTIDGV--DSEVVR 306
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+++D EDI L E VQRGL+S Y G
Sbjct: 307 RLAVQDRSTTVEEDIYLVESVQRGLKSRGYKPG 339
>gi|425783201|gb|EKV21060.1| Naphthalene 1,2-dioxygenase subunit alpha [Penicillium digitatum
Pd1]
Length = 377
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 40/351 (11%)
Query: 46 LELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHA--S 103
LE +F + W + ++ +LK D+ + +F++ RD GKI+AFHNVCRH A
Sbjct: 4 LERRAIFSKRWLFITHSMRLKKTGDWLRYELAGFDFIITRDREGKINAFHNVCRHRAYPV 63
Query: 104 ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL--VPLEVATWGPFV 161
+ GSG C YHGW+YGL+G L KA + + +F+ ++ GL + L+V G F+
Sbjct: 64 VEKEGSGNSQILACRYHGWSYGLNGKLAKAAKYQELSNFDKEQNGLYKIHLKVDVNG-FI 122
Query: 162 LLNMGKEAVHQ---EEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVF 218
+NM V + EE +V E + + D +Y + +Y NWK+
Sbjct: 123 WINMDANEVPEVSWEEHFRDVDKQE----RYKAYNFEDYDLDHTYALQGDY----NWKIL 174
Query: 219 CDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIY 278
DN+ + YH P H + L L+S+ + L + CES + L + + Y
Sbjct: 175 ADNF-NECYHCPTTHADIPEFLNLESFDSDLKDGHIQHHCESTPEQIQKG---LYTASTY 230
Query: 279 AF------IYPNF-MINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFIEQSL 330
F + P+F MI ++ +P + ++ ++ + + + D D I +
Sbjct: 231 YFPMSAMVVSPHFIMIQKF---------LPSSAKSSQMAYEVYRNRNSSDADFKLISEMY 281
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
+V ED ILC Q+ L+ + SG P E+ F S + +T
Sbjct: 282 A---RVMGEDKILCNNAQKNLDRNVFTSGELHPRWEKAPLFFQSTVRDVIT 329
>gi|393719305|ref|ZP_10339232.1| Rieske (2Fe-2S) protein [Sphingomonas echinoides ATCC 14820]
Length = 416
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 155/351 (44%), Gaps = 44/351 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS-GRIGEVEFVVCRDDNGKIH 92
P YTDP + A+E+ RV SWQ+V + + L +P F + +GE + R D+G I
Sbjct: 16 PGWLYTDPEYYAVEMARVIRPSWQIVCHQNDLAEPGAFHTLDYLGE-SIIAVRGDDGVIR 74
Query: 93 AFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
AF NVCRH A L G SG VCPYH WTY DG L ++ E GL
Sbjct: 75 AFANVCRHRAMRLVEGPSGCAKKLVCPYHAWTYETDGRLTGVPMRRDYPALDLAENGLAR 134
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYT 210
+++ W FV + + E D VA ++I + +LS + R+
Sbjct: 135 VDLEIWRGFVFVRL--------EGDGPSVAEMMAPYDAQIAPYRFEEMQTLSPVRLRDRA 186
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLA------------------SGLQLDSYSTSLYEK 252
+ NWK DNY D H+P AH GL SG +D S +++E+
Sbjct: 187 V--NWKNVGDNYSD-NLHIPVAHDGLTRLFGKSYAIEAEPWVDKMSGRLVDRASDNVWER 243
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
Q + RL +Y ++PN + Y +D +P +PT C +
Sbjct: 244 F-YQTHLPPVAHLPEANQRLW---LYFKLWPNMAFDLYADQIDFMQWLPTSPTTCVLREM 299
Query: 313 YFLDGSLKDDKAFIE----QSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
F +L DD+ ++ + + + V ED L E VQ+G+ S +Y +G
Sbjct: 300 AF---ALPDDRREMKLVRYANWRINRVVNAEDTWLIERVQQGMASHSYTAG 347
>gi|116696065|ref|YP_841641.1| phenylpropionate dioxygenase or related ring-hydroxylating
dioxygenase, large terminal subunit [Ralstonia eutropha
H16]
gi|113530564|emb|CAJ96911.1| phenylpropionate dioxygenase or related ring-hydroxylating
dioxygenase, large terminal subunit [Ralstonia eutropha
H16]
Length = 373
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 32/345 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
A T P+ +YT E +F RSW V + Q+ + + + ++ V R +G
Sbjct: 16 AYTLPAHYYTSQEVFEQEKKTIFARSWVCVMHKSQVAENNQYATVKVAGENVFVVRGRDG 75
Query: 90 KIHAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF+NVC H A + A G+GK K+ CPYH W++GLDG L+ + F
Sbjct: 76 VLRAFYNVCPHRAHELFADGAGKAKNVITCPYHAWSFGLDGKLIHVRNAENVPGFCKDNA 135
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GL P+ V + V +N+ ++D+ +A G + EI + L +
Sbjct: 136 GLTPVRVEEFCGLVFVNL--------DMDAKPLAELAGGLNDEIRARCPDVDKLVPAHKL 187
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
Y ++ NWKV DNYL+ H AH L +++++Y +E + + G T
Sbjct: 188 TYEMKANWKVVVDNYLE-CLHCQTAHPALVESIRMETYK---HEVRGLYTSQVGQTRSGS 243
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG--SLKDDKAF 325
D S A PN Y W + L + V + + +D +++ + +
Sbjct: 244 DAFTYDSDA------PNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQHFEFY 297
Query: 326 IEQSLKDSEQVQM----------EDIILCEGVQRGLESPAYCSGR 360
S +EQ Q+ ED+ + E VQRGL+S Y +G+
Sbjct: 298 FRDSTPTAEQEQLIEYYKNVLKPEDLSIVESVQRGLKSRGYRNGQ 342
>gi|91782363|ref|YP_557569.1| (Fe-S)-binding protein [Burkholderia xenovorans LB400]
gi|91686317|gb|ABE29517.1| Putative iron-sulphur rieske protein [Burkholderia xenovorans
LB400]
Length = 387
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 159/383 (41%), Gaps = 33/383 (8%)
Query: 12 VAAQKLVYEFNP--QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
+A Q LV E + P A P YT P FL LE +F R WQ VG LK P
Sbjct: 8 IAVQALVDELQTGCERPFSDAHAMPPGVYTSPEFLTLEERAIFEREWQCVGRASALKVPG 67
Query: 70 DFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGT 129
D+ + RIG V+ RD+ ++ A NVC H S+L G G VCPYH W Y LDG
Sbjct: 68 DYLTTRIGTQPIVILRDEQMQLKAMSNVCLHRMSVLLEGRGNVRRVVCPYHAWNYSLDGA 127
Query: 130 LLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEA--VHQEEVDSNVVANEWLGG 187
L A + + F + + L + W ++ + + + A VH + L
Sbjct: 128 LQGAPLMDRQEGFCKEAYKLPAVRCEEWQGWLYVTLDETAPPVHLQ-----------LAR 176
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ--- 241
SE++ G+ + E+ + NWK+ +N+++ YH+P H+ G S L+
Sbjct: 177 LSELVGAYGMSDYIETF-HEEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEME 234
Query: 242 -LDSYSTSLYEKVSIQRCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDT 296
Y Y ++ + D+T G + A+ A IYP ++ +
Sbjct: 235 CPPGYPAFNYHWITKEASLPIGNAHPDNTRLTGHWRKTTALLA-IYPTHLVTLTPGYFWY 293
Query: 297 NLVIPLAPTRCKVVFDYFLDGSLKDD---KAFIEQSLKDSEQVQMEDIILCEGVQRGLES 353
++ P R + F L D A + K ++V ED E V RG+ +
Sbjct: 294 LVLQPQGVGRVHIRFGGGLAPEFIADPEANAHMTTLKKLLDEVNAEDKRGVEAVFRGVHA 353
Query: 354 PAYCSGRYAPSVEQTMYHFHSLL 376
P G + +E+ Y F L
Sbjct: 354 PLARPGHLS-HLERPNYDFARYL 375
>gi|56696474|ref|YP_166831.1| Rieske (2Fe-2S) domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56678211|gb|AAV94877.1| Rieske 2Fe-2S domain protein [Ruegeria pomeroyi DSS-3]
Length = 363
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 150/349 (42%), Gaps = 16/349 (4%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDP+ A E +F R+WQ + QL++P D+ + +G+ + +G I F
Sbjct: 10 ARYYTDPAIFAAEQAGLFARTWQFACHASQLENPGDYLAFDLGDESLFCIKGRDGVIRTF 69
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
+NVC+H A L +G+G VCPYH WTY L G L A + F+ + L +
Sbjct: 70 YNVCQHRAHQLVSGAGSTRVVVCPYHAWTYELTGHLRAAPNAKSVPGFDAAQICLSEIRT 129
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECN 214
+ FV +N+ EA + NV A E+ + S L L E +CN
Sbjct: 130 EVFLGFVFVNLDPEAQPMDHWFPNVRA--------ELEAFVPNWSDLKPLEWVEIPEDCN 181
Query: 215 WKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTSL--YEKVSIQRCESGSTEGTDDTHR 271
WKV +NY + YH H ++G ++ ++Y Y C D
Sbjct: 182 WKVSVENYSEC-YHCSLNHPTFSTGVIRPETYDIQPQGYCLRHTTECNDLGQMSYDIDSG 240
Query: 272 LGSKAIYA--FIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
+ Y+ F++P F Y G ++T + R V ++ G +++
Sbjct: 241 FPNNDRYSSWFLWPMFSFQVYPGNLLNTYHWRAVDAGRVVVWRGWYSVGG-AENETVRRM 299
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
+++D EDI L E VQRGL S Y G + HS+LH
Sbjct: 300 AVQDRATTVEEDIRLVESVQRGLRSRGYVPGPLVVDPGCGVNSEHSILH 348
>gi|374620881|ref|ZP_09693415.1| ring-hydroxylating dioxygenase, large terminal subunit [gamma
proteobacterium HIMB55]
gi|374304108|gb|EHQ58292.1| ring-hydroxylating dioxygenase, large terminal subunit [gamma
proteobacterium HIMB55]
Length = 364
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 151/348 (43%), Gaps = 47/348 (13%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +Y DP+ A+E + +WQ G+ Q+K+P D+F+ I RD G ++ F
Sbjct: 10 ARYYVDPAIFAIEKQHLLATTWQFAGHESQVKNPGDYFTFSIAGENLFCIRDREGNLNCF 69
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
+NVC+H A L G G +CPYH WTY L G L + F+ + L + +
Sbjct: 70 YNVCQHRAHELVEGDGNARLLICPYHTWTYELSGELRMGPNVLSTPGFDRSKICLTSVRL 129
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGID-SSLSYLCRREYT 210
+ F+ +N+ +A + EW G+ E L+ N +D + + Y+ E T
Sbjct: 130 ENFHGFLFVNLDDDAKPMD---------EWFPGAREELASYVPNILDLTPVEYVEVFEKT 180
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
NWKV +NY + YH H A+G+ S Y+ C +TE DD
Sbjct: 181 ---NWKVSVENYSE-CYHCSRNHPTFANGV----IKPSTYDIQPQGYCLRHTTECQDDLS 232
Query: 271 RL--------GSKA----------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVF 311
+ KA +++F +YP ++N Y W ++ V + R F
Sbjct: 233 DMTYEIDLESNDKAGKYSSWFLWPMFSFQVYPGNVLNTYH-WRVSDAVDEVVMYRGWYAF 291
Query: 312 DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
D K + + +++D + EDI L E +QRG+ S Y G
Sbjct: 292 DE------KSEAIARQLAVQDRDTTVAEDIRLVESIQRGMNSRGYKPG 333
>gi|448089424|ref|XP_004196804.1| Piso0_004030 [Millerozyma farinosa CBS 7064]
gi|448093703|ref|XP_004197835.1| Piso0_004030 [Millerozyma farinosa CBS 7064]
gi|359378226|emb|CCE84485.1| Piso0_004030 [Millerozyma farinosa CBS 7064]
gi|359379257|emb|CCE83454.1| Piso0_004030 [Millerozyma farinosa CBS 7064]
Length = 439
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 157/371 (42%), Gaps = 37/371 (9%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD-NGK 90
T P+ W+ S E +F +SW ++ + + P D++ + F + + +G+
Sbjct: 25 TLPARWWVSDSVFEFEKRAIFNKSWLFCTHSSRFEKPGDYYRFSFTGISFFIIKSKVDGQ 84
Query: 91 IHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
I AFHNVCRH A ++ G C YHGW+Y DG L KA ++ F ++ L
Sbjct: 85 IKAFHNVCRHRAFPVIRKDKGSSVVLGCKYHGWSYNSDGKLTKAPHFDQVEGFEKEQNSL 144
Query: 150 VPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
P+ T V +N E D + G SE+ + + D Y E
Sbjct: 145 FPIRTHVTRHGLVFVNFSNEK------DVTPFEEWYEGLESEMDAFDFSD--YEYHMSYE 196
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK-----VSIQRCESGST 263
+ NWK D Y + YH P AH GL S ++++Y + I R + T
Sbjct: 197 LDGQFNWKTLIDGYQEC-YHCPTAHPGLNSAFRMETYDVVPKTRYCRHYAEIVRNDQDET 255
Query: 264 EGTDDT----------HRLGSKA--------IYAFIYPNFMINRYGPWMDTNLVIPLAPT 305
+ + ++ KA ++ +++P +N Y P + V+P + T
Sbjct: 256 VEEESSWMGFRKQKSRKKISQKANPGGDFDGLWVYLFPTNGVNCYSPAWYSIRVLPQSAT 315
Query: 306 RCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSV 365
+ +D + L D+ + + ++V++ED LC+ QR L Y +G P+
Sbjct: 316 HTILQYDIYTKKGL--DETTKTEFVDFLQKVELEDFDLCQFTQRNLNQGIYTAGYLHPTK 373
Query: 366 EQTMYHFHSLL 376
E+ + ++ L+
Sbjct: 374 ERGVLYYQKLV 384
>gi|386742877|ref|YP_006216056.1| dioxygenase subunit alpha [Providencia stuartii MRSN 2154]
gi|384479570|gb|AFH93365.1| dioxygenase subunit alpha [Providencia stuartii MRSN 2154]
Length = 375
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 162/375 (43%), Gaps = 24/375 (6%)
Query: 16 KLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
K V N + I+ A T P+ +YT E +F SW V ++ ++K+ + + +
Sbjct: 5 KKVISINDHLDIDNAWTIPARYYTSDDVFEFEKENIFANSWVCVAHSSEVKEKNAYITRQ 64
Query: 76 IGEVEFVVCRDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKA 133
+ V+ R + + F+NVC H L +G SGK K+ CPYH W + LDG L A
Sbjct: 65 LIGESLVIVRGRDDVLRGFYNVCPHRGHQLISGESGKMKNVITCPYHAWAFKLDGQLAHA 124
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
T + +F L V F+ +N+ E + + + G ++++
Sbjct: 125 TNCENVNNFEADAMSLSSFHVIEHAGFIYINLT-------EGEPQPIEEQLPGLAAKMEE 177
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ L R NWK DNY++ YH P H AS + ++ Y L E
Sbjct: 178 ACSVIRDLKLAARFVSHTPANWKTIVDNYIE-CYHCPTNHVSFASSVDVNVYEHQLNENW 236
Query: 254 SIQRCESGSTEGTD--DTHRLGSKAIYAFIYPNFMINRY--GPWMDTNLVIPLAPTRCKV 309
++Q ++ +E + D + + +I+P+ M N G +M P++
Sbjct: 237 TVQIGQAKPSESSYQFDESVVNPRFFGFWIWPSTMFNMPPGGDFMTVIYEFPVSAGETLQ 296
Query: 310 VFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQ 367
+D YFL+ L + + + + + + ED+ L E VQ+GL S Y GR ++
Sbjct: 297 HYDIYFLNEELTEYQKNLVEWYRTV--FRPEDLRLVESVQKGLRSRGYRGQGRIMADRQR 354
Query: 368 T------MYHFHSLL 376
+ + HFH L+
Sbjct: 355 SGISEHGVAHFHKLI 369
>gi|255939332|ref|XP_002560435.1| Pc16g00100 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585058|emb|CAP92680.1| Pc16g00100 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 411
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 154/376 (40%), Gaps = 44/376 (11%)
Query: 23 PQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFV 82
P+ P E P+SWY P LE +F + W ++ + + + P DF+ + FV
Sbjct: 19 PKAPAEPVKALPASWYRSPEIYELERRAIFSKKWILITHKLRFEKPGDFYRFEMTGFSFV 78
Query: 83 VCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+C + G + FHN+CRH A +++ G C YHGW+YGLDG L KA + +
Sbjct: 79 LCLNRQGNLSGFHNICRHRAFPLVSQDQGNSPVVSCKYHGWSYGLDGKLTKAPKDDDVPG 138
Query: 142 FNVKEFGLVPLEVATWG-PFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
F +E L P+ + FV +N+ DS+ W G+D+
Sbjct: 139 FKKEEQSLFPVHIHVDALGFVWVNL----------DSSRTPIPWED------DFQGVDTQ 182
Query: 201 LSYLCRREYTI-------------ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ RE+ NWK DNY + YH AH +A L SY
Sbjct: 183 ERF---REFDFGRYMFDHTWHMNGNYNWKTLADNY-NECYHCSVAHPDVAKLADL-SYYY 237
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
++ + IQ + D + S + +PN + + +P + C
Sbjct: 238 TVSKAGHIQHFSRPKQDKVKDDIKNAS----TYYFPNACMTVSPHFFYLMRCVPTSVGTC 293
Query: 308 KVVFDYFLDGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
+ ++ + + D D +I+ K +V ED LC Q+ L++ + +G+ P +E
Sbjct: 294 SMEYEVYRNKEASDEDFEYIDSFFK---RVLNEDKHLCNAAQKNLDAGVFVNGQLHPDLE 350
Query: 367 QTMYHFHSLLHCNLTN 382
F + + L N
Sbjct: 351 SAPLFFQNTVRGLLRN 366
>gi|441170538|ref|ZP_20969302.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces rimosus
subsp. rimosus ATCC 10970]
gi|440615315|gb|ELQ78515.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces rimosus
subsp. rimosus ATCC 10970]
Length = 413
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 154/359 (42%), Gaps = 24/359 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P ++YTDP E +F W L P F + ++G +V R+ G
Sbjct: 19 TLPGAFYTDPETFRREQRHIFESRWFCAVRAADLPRPGAFRTVQVGRESVLVVRNRRGGF 78
Query: 92 HAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
A+ NVCRH + L T SG+ + CPYH WTY LDG L+ A + + D + E GL
Sbjct: 79 GAYLNVCRHRGARLCTEESGEVRRNLQCPYHAWTYDLDGRLVAAPNLQRMPDVDRSERGL 138
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI--LSINGIDSSLSYLCRR 207
+P+ + W +V + + E EE + V E LGG I + G+D L RR
Sbjct: 139 LPVGLREWLGYVWVCLADEPPSFEETVTGAV-GERLGGVEAIERYGMAGLD-----LGRR 192
Query: 208 -EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLY---EKVSIQRCESG 261
Y + NWK+ +N+++ YH H L + D Y+ Y + E
Sbjct: 193 VTYDVRANWKLIVENFME-CYHCATIHPELTDMIPEFADGYAAQYYVGHGAAFAEEAEGF 251
Query: 262 STEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+ +G+ R+ + YA I P +N + + + PLA R V D+
Sbjct: 252 TVDGSGGFARIAGIEESQDRRYYAITIRPQVFLNLVPDHVIVHRMFPLAADRTVVECDWL 311
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+ A + +S++ +V +D CE Q ++S AY +G E + FH
Sbjct: 312 YAPEVVASGADLSRSVELFHRVNTQDFAACERTQPAMDSRAYRAGGVLVPSEHHIAGFH 370
>gi|169782179|ref|XP_001825552.1| Rieske 2Fe-2S family protein [Aspergillus oryzae RIB40]
gi|238500620|ref|XP_002381544.1| iron-sulfur domain containing protein, putative [Aspergillus flavus
NRRL3357]
gi|83774295|dbj|BAE64419.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691781|gb|EED48128.1| iron-sulfur domain containing protein, putative [Aspergillus flavus
NRRL3357]
gi|391866996|gb|EIT76261.1| phenylpropionate dioxygenase [Aspergillus oryzae 3.042]
Length = 413
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 40/337 (11%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N + PI+ AL P++WYT P LE +F R W ++ + +L D+ I F
Sbjct: 23 NDKTPIQ-AL--PANWYTSPEMWELERRAIFSRKWMLITHKLRLPSTGDYLVYSIAGYPF 79
Query: 82 VVCRDDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
++ RD +G +AFHNVCRH A +AT GK F C YHGW+YGL+G L KA ++
Sbjct: 80 ILVRDKDGNFNAFHNVCRHRAFPVATEEKGKARIFACKYHGWSYGLNGKLAKAPGYQDLE 139
Query: 141 DFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI---LSING 196
F+ + GL + V F+ +N+ +A Q E+ W S++ NG
Sbjct: 140 GFDKNKNGLFQIHVHVDNNGFIWVNL--DAKEQPEI-------AWEDDLSKVDLQERFNG 190
Query: 197 ID-SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
I+ ++ E + NWK+ D+Y + YH + G + + Y+ S E+++
Sbjct: 191 INWDEYNFDHTWEMEGDFNWKILADHY-NECYHPDTSDNGATTDSSIVDYTNSTPEQIA- 248
Query: 256 QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL 315
G + + +PN + + + ++P + T+C ++ +
Sbjct: 249 ----------------RGLRITSTYYFPNASMTIFPHFFFLQRIVPTSATKCMTRYEVYR 292
Query: 316 DGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGL 351
+ D D I Q+ K ++ ED LC Q+ L
Sbjct: 293 NKDSSDEDFELISQTYK---RIMSEDKDLCTDAQKNL 326
>gi|296394862|ref|YP_003659746.1| Rieske (2Fe-2S) domain-containing protein [Segniliparus rotundus
DSM 44985]
gi|296182009|gb|ADG98915.1| Rieske (2Fe-2S) iron-sulfur domain protein [Segniliparus rotundus
DSM 44985]
Length = 413
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 160/370 (43%), Gaps = 29/370 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ T +Y P A E R+F W TD+L P F + +G ++ R
Sbjct: 42 PMTLLPTLSGEYYHSPDVFAAEQARIFESMWFCAARTDELAAPGAFSAVTVGHESILLVR 101
Query: 86 DDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD- 141
+ ++ AF NVCRH ++L G K++ CPYH WTYGLDG L+ A ++ + D
Sbjct: 102 GRDEQLRAFLNVCRHRGAMLCVEPHGQAKRT-LRCPYHAWTYGLDGKLVAAPNLSSLCDD 160
Query: 142 ----FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI 197
+ E+GLVP+ + W + + + K+ E D A E LG + I + +
Sbjct: 161 TGRSIDRTEYGLVPVPLREWLGYAWVCLAKDPP-SFETDVVGAATERLGDPAAIERYH-L 218
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI-- 255
D L R EY + NWK+ +N+++ YH H L L ++ L + +
Sbjct: 219 D-RLKVGKRIEYDVAANWKLIIENFME-CYHCASIHPELVK--VLPEFAGGLAAQYFVGH 274
Query: 256 -----QRCESGSTEGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLA 303
+ E + +G+ +L + YA I P +N + + PLA
Sbjct: 275 GAQFGEHVEGFTVDGSPGVAQLPDLGPDQDRRYYAVTIKPTVFVNLTPDHAIVHRMFPLA 334
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
P R +VV D+ + + + +S++ +V +D CE Q + S AY +G
Sbjct: 335 PDRTRVVCDWLYLPEVVERGDDVSRSVELFHRVNTQDFQACERTQPAMRSRAYHAGGVLV 394
Query: 364 SVEQTMYHFH 373
E + FH
Sbjct: 395 PAEHHIGLFH 404
>gi|154284884|ref|XP_001543237.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406878|gb|EDN02419.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 381
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 150/350 (42%), Gaps = 45/350 (12%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY E +F + W + + ++ DP DF S + F + +D +G++
Sbjct: 17 TLPASWYHSTQLYEAERRAIFSQKWLQITHANRFTDPGDFASYEMAGYPFFIIKDRSGEL 76
Query: 92 HAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AFHNVCRH A ++ SGK + C YHGW+YGL+G L KA R + DFN + + L
Sbjct: 77 RAFHNVCRHRAFPVVKEKSGKGRKILSCGYHGWSYGLNGKLAKAPRFQNLPDFNAENYSL 136
Query: 150 VP--LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
P L + G FV +N+ + V D A + + E L + ++ SY
Sbjct: 137 FPIHLHIDRCG-FVWVNLDAQNVPSVSWDEQCGAVD----AQERLGVFEME-KYSYHHSW 190
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
E+ E NWK DNY +G I E
Sbjct: 191 EFEAEYNWKTMVDNYNEG----------------------------FIAHFARPKPEYAA 222
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK-AFI 326
D + S +++P+ I ++ +PL+ T ++ ++ + D++ A +
Sbjct: 223 DNN---SNVAPTYVFPSSAITINSVYLYLTRCVPLSATSVRMEYEVYRHAGCADEEFAAM 279
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ +K Q++ ED +LC VQ L Y SG P E + + L+
Sbjct: 280 DTFMK---QIEEEDRVLCSLVQANLNVGVYRSGPLHPREEMGVAYVKGLV 326
>gi|167034016|ref|YP_001669247.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida GB-1]
gi|166860504|gb|ABY98911.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida GB-1]
Length = 387
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 33/370 (8%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E A T PS ++ D A E R+F +W + G+ ++ +P F + + VV +
Sbjct: 22 EHAFTLPSRYFFDEQIFAAERDRIFMSAWHLAGHRNEFAEPGQFVVCDMFDQSVVVACGN 81
Query: 88 NGKIHAFHNVCRHHAS-ILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+GKI+AFHNVC+H + +L G + C YH W Y +DG+L A R + F+ +
Sbjct: 82 DGKINAFHNVCQHRGNRLLDVRRGNDIRVLRCAYHSWCYEMDGSLRSAPRSERLIAFDKQ 141
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+F + + V G FV N + D+ +A + G E+ ++ + +
Sbjct: 142 QFNIPKVRVEELGGFVYFNF--------DADAPSLAELFPGADEEMRAVFPDLGKMRLIE 193
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYA---HKGLASGLQLDSYSTS------LYEKVSIQ 256
++ + NWKV DN ++G YH + H LA + Y + Y + Q
Sbjct: 194 EQDVIVPANWKVIMDNSIEG-YHFKLSGPCHIDLAKLIDFKGYRLTKRDNWWTYIAPANQ 252
Query: 257 RCESGSTEGTDDTHRLGSKAIYAFIYPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+ E + ++PN F + ++ T ++IPL R + F Y+
Sbjct: 253 QAEEAYGVKLSGPRNPDERFFNIGLWPNNTFYTFPFSAFLGTFIMIPLDAERSLLRFGYY 312
Query: 315 LDGSLKDDKAFIEQSLKD--SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT---- 368
S + + + +E + EDI L VQ+GL S Y GRY E++
Sbjct: 313 ---SPHEQVPEVSHACMKWMNEDLGPEDIELNISVQKGLRSLGYDQGRYMIDAERSNESE 369
Query: 369 --MYHFHSLL 376
++HFH L+
Sbjct: 370 HLVHHFHKLV 379
>gi|372271705|ref|ZP_09507753.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Marinobacterium
stanieri S30]
Length = 394
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 163/378 (43%), Gaps = 43/378 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQL-----KDPQDFFSGRIGEVE 80
P+ +A P++ Y D + E V ++W +G+T L P DF +
Sbjct: 19 PLAEAAGMPNAVYIDDALFEQERDEVLGKTWAALGFTSDLPTNGFAKPVDFMG-----LP 73
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
+ R+ +G+ FHNVC H IL T + V CPYH WTY L+G L I G+
Sbjct: 74 LAIMRNRDGEYKVFHNVCSHRGMILLTEETEVEGMVRCPYHSWTYDLNGNLKGTPHIGGV 133
Query: 140 -----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ F ++ GL + W V +N+ +A EE ++ W SE
Sbjct: 134 GVHKAEGFVCEKHGLREVRSYVWAGMVFINLSGDAKPFEEHIEPLI-QRW----SEFCGK 188
Query: 195 NGIDS--SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS-YSTSLYE 251
+G D + + + CNWK+ +NY + YH+P+ H L + LD Y+ + +
Sbjct: 189 DGWDDLHIAPTGSQMQLEVNCNWKLAIENYCEA-YHLPWVHPSLNTYSPLDQHYNLIIND 247
Query: 252 KVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPNFMINRYGPWMDTNLVIPL 302
+S Q + + T R S +A Y +YPN M+ G D I L
Sbjct: 248 DMSGQGSYTYNLSDVAGTRLPRFPSWPEDRLRQAEYVSLYPNVML---GMQADHFFAIIL 304
Query: 303 APTRCKVVFD-----YFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRGLESPAY 356
P + V + Y + + D+ A S ++ +V ED+ EG+Q G +SP +
Sbjct: 305 EPRKKDVTLENLRLFYVGEDACGDEYAACRHSQLEAWKVVFGEDVFAVEGMQAGRQSPGF 364
Query: 357 CSGRYAPSVEQTMYHFHS 374
G ++P ++ +HFH
Sbjct: 365 TGGVFSPVLDGPTHHFHG 382
>gi|402824096|ref|ZP_10873481.1| Rieske (2Fe-2S) protein [Sphingomonas sp. LH128]
gi|402262364|gb|EJU12342.1| Rieske (2Fe-2S) protein [Sphingomonas sp. LH128]
Length = 389
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 146/347 (42%), Gaps = 35/347 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS-GRIGEVEFVVCRDDNGKIH 92
P+ Y+D F E RVF SWQ+V + + +P D+ + IGE VV R + +
Sbjct: 20 PAWTYSDAEFFEAEKERVFAPSWQIVCHESDIPNPGDWHTLDYIGE-SVVVVRGRDDALR 78
Query: 93 AFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
AF NVCRH S + GS G VCPYH WTY LDG L G + E GL P
Sbjct: 79 AFTNVCRHRGSRIVDGSNGCAKKLVCPYHAWTYDLDGRLTGVPDSAGYPALDRAEHGLAP 138
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+E+ W FV + + + V + E + + +L + R +
Sbjct: 139 VEIEVWSGFVFVRLVNDG--GPSVARMMAPYEQMVAPYRFRELK----ALGRVTLRHRDV 192
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLAS------------------GLQLDSYSTSLYEKV 253
NWK DNY D G H+P AH GL G +D S + E++
Sbjct: 193 --NWKNIGDNYSD-GLHIPVAHPGLTRLFGRSYGIEAEANVDRMWGDLMDMPSANWSERM 249
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVV-FD 312
QR + R +Y ++PN + Y +D +P++PT +
Sbjct: 250 -YQRLLPPVPHLPPERQR---HWLYFKLWPNVAFDVYPDQVDFMQWLPVSPTTSIIREIS 305
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
Y LD ++ KA + + + +V ED L VQ G+ S ++ G
Sbjct: 306 YVLDDHRREMKAARYLNWRINREVNAEDTALITRVQAGMASRSFSIG 352
>gi|302887218|ref|XP_003042497.1| hypothetical protein NECHADRAFT_42368 [Nectria haematococca mpVI
77-13-4]
gi|256723409|gb|EEU36784.1| hypothetical protein NECHADRAFT_42368 [Nectria haematococca mpVI
77-13-4]
Length = 392
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 158/349 (45%), Gaps = 21/349 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+SWY +P F LE +F +SW ++ ++ Q +P + + F + RD G +
Sbjct: 4 TLPASWYREPGFYELERRAIFSKSWILISHSCQFNEPGKYARYEMAGYPFFIIRDRAGSV 63
Query: 92 HAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
+AF NVCRH A I+ +GK C YHGW+Y ++G L KA R ++ F ++ L
Sbjct: 64 NAFLNVCRHRAFPIVHEDAGKVMVLSCKYHGWSYSMNGNLAKAPRFDQVEGFQKDDYKLY 123
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSLSYLCRREY 209
+ + ++G V+ + + ++ E GG + ++ D S +Y +
Sbjct: 124 KVHTH------IDDLGFLWVNLDAAEKPTLSWEEQFGGVDKQPRLSNFDMS-NYEYDHTW 176
Query: 210 TIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
++E NWK +NY + YH P AH GLA + + K ++ E +
Sbjct: 177 SMEGKFNWKTLIENY-NECYHCPTAHPGLAPFFRNNRQMVYGCHKYWVEHLGGKGEERS- 234
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
S +++PN + + ++P + T + ++ + + ++ ++
Sbjct: 235 ------SSVSPTYMFPNASVTLTPVFFYMMSIVPTSATTSLMRYEVYRAKNATKEQ--LQ 286
Query: 328 QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ L QV+ ED L G Q L + Y +G + P VEQ + + L+
Sbjct: 287 EKLDFFAQVEGEDKWLANGSQANLNNDTYTTGPFHPDVEQGVTYVTGLV 335
>gi|148553251|ref|YP_001260833.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148498441|gb|ABQ66695.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 442
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 18/207 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y P ++ LE R++ R WQ+ +++ +P DF++ I + V R +G I A
Sbjct: 20 PADAYVSPDYVRLEKERLWPRVWQIACREEEIPNPGDFYTYDIADESIAVVRKTDGAIAA 79
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV----KEFGL 149
+HNVC H L G G+ F C YHGW + LDG K T + KD+ E L
Sbjct: 80 YHNVCPHRGRRLTAGCGRMGKFHCKYHGWQWNLDG---KPTEVVDRKDWGELLQDSEITL 136
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
P++ A+WG +V +NM ++ EE LG + +L +D + Y+ R+
Sbjct: 137 HPVKSASWGGWVFINMDPDSESLEEH---------LGEAKTLLDPFEMD-RMRYVWRKRI 186
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGL 236
T+ CNWK + +++ GYHV H+ L
Sbjct: 187 TMPCNWKTAQEAFME-GYHVQTTHRQL 212
>gi|291302678|ref|YP_003513956.1| Rieske (2Fe-2S) domain-containing protein [Stackebrandtia
nassauensis DSM 44728]
gi|290571898|gb|ADD44863.1| Rieske (2Fe-2S) domain protein [Stackebrandtia nassauensis DSM
44728]
Length = 390
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 158/343 (46%), Gaps = 28/343 (8%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q ++ T P S YTD + L EL F R + +T L++P + + + +VV
Sbjct: 23 QEMFDEVKTIPVSKYTDTALLDQELASAFTRYPLIASHTAALREPGSYVASDWDQFPYVV 82
Query: 84 CRDDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R ++GK+ F+N CRH A +L+ SG F+CP+HGW YGL+G L TR
Sbjct: 83 VRGEDGKVRGFYNQCRHRGARLLSERSGAIKNFICPFHGWVYGLNGELKGITRSQDFPCV 142
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ ++GLV L V G FV ++ +A+ S++ A ++G + L + + +
Sbjct: 143 DKSDYGLVELPVTESGGFVWISRTPDAI------SDIPA--FMGRFHDDLESFEVANLVR 194
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKG-LASGLQLDSYSTSLYEKVSIQ-RCES 260
Y + + NWK+ YL+ GYHVPY H+ LA+ + + Y+K R +
Sbjct: 195 Y-KKTKVVKNANWKLLIKTYLE-GYHVPYLHRDTLATAFKRGQLA---YDKDGPHIRMMA 249
Query: 261 GSTEGTDDTHR-------LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
G T TD T + L +IY ++PN + ++ N P AP R +
Sbjct: 250 GRTNLTDITAKPEAEWRILDHVSIYYTLFPNTFFILHPDYVSVNTFWPQAPDRTIWTHEM 309
Query: 314 FL---DGSLKDDKAFIEQSLKDSEQV--QMEDIILCEGVQRGL 351
D + ++ +E+ + + ED + E VQR L
Sbjct: 310 LYRAEDFNGSSGQSALEKRFRFTNDTVFDQEDFAIAEEVQRNL 352
>gi|94971036|ref|YP_593084.1| Rieske (2Fe-2S) protein [Candidatus Koribacter versatilis Ellin345]
gi|94553086|gb|ABF43010.1| Rieske (2Fe-2S) protein [Candidatus Koribacter versatilis Ellin345]
Length = 376
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 153/365 (41%), Gaps = 40/365 (10%)
Query: 21 FNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
P + +A+T P +YTDP+ E+ + + W G T+Q+ + D+F+ R+
Sbjct: 8 IRPALDASEAMTLPQQYYTDPAHFQREMEAIHFDMWLCAGRTNQIPNAGDYFTRRVANAS 67
Query: 81 FVVCRDDNGKIHAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRIT 137
++ RD+ G I AFHNVCRH + L +GS S C YH WTY LDG LL+A +
Sbjct: 68 VIIVRDEQGGIRAFHNVCRHRGTQLCKQESGSFSGS-IQCGYHAWTYKLDGGLLRAPHME 126
Query: 138 GIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI 197
++ F ++ L + W + +N+ + +E L G + +
Sbjct: 127 KVEGFCEADYPLNHVAAEVWDGHIFINLSAHP---------IPFSEHLAGLDQKFRPWRM 177
Query: 198 DSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLA------SGLQLDSYSTSLYE 251
+ L + RR Y ++ NWK+ NY + H P H L SG T L
Sbjct: 178 E-ELQMVERRVYHLKANWKLVIQNYSE-CLHCPIVHPLLQKQSHYMSGDNEPPQPTYLGG 235
Query: 252 KVSIQ-------------RCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNL 298
++ ++ RC D+ H Y + PNF +N + +M T
Sbjct: 236 RMDLRDGVKSLTMDGNSIRCALPGLSSADERH-----VYYYCLLPNFFLNLHPDYMLTFT 290
Query: 299 VIPLAPTRCKVVFDYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYC 357
+ P A + ++V ++ F +++ + +D L + Q G+ S Y
Sbjct: 291 MWPKAADQTEIVCEWHFHPDEIAKPGFNPNDAIEFWDITNKQDWELSDLAQAGISSKGYQ 350
Query: 358 SGRYA 362
G Y+
Sbjct: 351 PGPYS 355
>gi|268592179|ref|ZP_06126400.1| putative dioxygenase subunit alpha YeaW [Providencia rettgeri DSM
1131]
gi|291312580|gb|EFE53033.1| putative dioxygenase subunit alpha YeaW [Providencia rettgeri DSM
1131]
Length = 375
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 162/375 (43%), Gaps = 28/375 (7%)
Query: 18 VYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG 77
V N + I+ A T P+ +YT E ++F SW V + ++K+ + + +
Sbjct: 7 VISINDHLDIDNAWTIPARYYTSNDIFEYEKEKIFANSWVCVAHVSEVKEKNSYITRELI 66
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATR 135
V+ R + + F+NVC H L +G SGK K+ CPYH W + LDG L AT
Sbjct: 67 GESLVIVRGRDDVLRGFYNVCPHRGHQLISGESGKVKNVITCPYHAWAFKLDGQLAHATN 126
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEILS 193
+ +F L V F+ +NM G+ +E++ G + ++
Sbjct: 127 CENVNNFEADAMSLSSFHVIEHAGFIYVNMTVGEPQPIEEQLP---------GLAEKMQE 177
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
G+ S L R NWK DNY++ YH P H AS + ++ Y L +
Sbjct: 178 ACGVISDLKLAARFVSHTPANWKTIVDNYIE-CYHCPTNHVSFASSVDVNVYEHQLLDNW 236
Query: 254 SIQRCESGSTEGTD--DTHRLGSKAIYAFIYPNFMINRY--GPWMDTNLVIPLAPTRCKV 309
++Q ++ +E + D L + +I+P+ M N G +M P+
Sbjct: 237 TVQIGKAKPSESSYQFDESVLDPRFFGFWIWPSTMFNMPPGGDFMTVIYEFPVNAGETLQ 296
Query: 310 VFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQ 367
+D YFL+ L + + + + + + ED+ L E VQ+GL S Y GR ++
Sbjct: 297 HYDIYFLNEELTEYQKNLVEWYRTV--FRPEDLRLVESVQKGLRSRGYRGQGRIMADRQR 354
Query: 368 T------MYHFHSLL 376
+ + HFH ++
Sbjct: 355 SGISEHGVAHFHKIV 369
>gi|295680813|ref|YP_003609387.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295440708|gb|ADG19876.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 383
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 33/372 (8%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N + P E A P + YT +FLALE VF W VG L D+ S ++ +
Sbjct: 21 NCERPFEDAHAMPPAVYTSEAFLALEQRDVFRNEWLCVGRASALAQTGDYLSAQLDDQPV 80
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
V RD +G + AF NVC H S+L G G VCPYH W Y LDG+L A +
Sbjct: 81 FVVRDASGALRAFSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYTLDGSLAGAPLMDQQPG 140
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F ++ L + TW ++ + + H V+S+ L G +++++ G+ + +
Sbjct: 141 FCKDQYRLPAVRCETWQGWIYVTLN---AHAPSVESH------LSGLTQLIAPYGMGNYV 191
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS------------GLQLDSYSTSL 249
E+ + NWK+ +N+++ YH+P H+ GL +Y +
Sbjct: 192 ETF-HEEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSKLEEMECPPGLPAFNYHW-I 248
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
++ S+ + H + A+ A IYP +I + ++ P R +
Sbjct: 249 TKEASLPIGNAHPANTRLQGHWRRTTALLA-IYPTHLITLTPGYFWYLILQPRGVGRVHI 307
Query: 310 VF-----DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
F F+D D ++L D +V ED E V RG+ +P G +P
Sbjct: 308 RFGGGLAPEFVDDPRAADYMATLKTLLD--EVNAEDRRGVEAVFRGVHAPLAKPGHLSP- 364
Query: 365 VEQTMYHFHSLL 376
+E+ Y F L
Sbjct: 365 LERPNYDFARYL 376
>gi|385203513|ref|ZP_10030383.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385183404|gb|EIF32678.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 387
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 159/383 (41%), Gaps = 33/383 (8%)
Query: 12 VAAQKLVYEFNP--QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
+A Q LV E + P A P YT P FL LE +F R WQ VG LK P
Sbjct: 8 IAVQALVDELQTGCERPFSDAHAMPPGVYTSPEFLTLEERAIFEREWQCVGRASALKVPG 67
Query: 70 DFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGT 129
D+ + RIG V+ RD+ ++ A NVC H S+L G G VCPYH W Y LDG
Sbjct: 68 DYLTTRIGTQPIVILRDEQMQLKAMSNVCLHRMSVLLEGRGNVRRVVCPYHAWNYSLDGA 127
Query: 130 LLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEA--VHQEEVDSNVVANEWLGG 187
L A + + F + + L + W ++ + + + A VH + L
Sbjct: 128 LQGAPLMDRQEGFCKEAYKLPAVRCEEWQGWLYVTLDETAPPVHLQ-----------LAR 176
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ--- 241
SE++ G+ + E+ + NWK+ +N+++ YH+P H+ G S L+
Sbjct: 177 LSELIGAYGMSDYIETF-HEEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEME 234
Query: 242 -LDSYSTSLYEKVSIQRCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDT 296
+ Y ++ + D+T G + A+ A IYP ++ +
Sbjct: 235 CPPGHPAFNYHWITKEASLPIGNAHPDNTRLTGHWRKTTALLA-IYPTHLVTLTPGYFWY 293
Query: 297 NLVIPLAPTRCKVVFDYFLDGSLKDD---KAFIEQSLKDSEQVQMEDIILCEGVQRGLES 353
++ P R + F L D A + K ++V ED E V RG+ +
Sbjct: 294 LVLQPQGVGRVHIRFGGGLAPEFIADPEANAHMTTLKKLLDEVNAEDKRGVEAVFRGVHA 353
Query: 354 PAYCSGRYAPSVEQTMYHFHSLL 376
P G + +E+ Y F L
Sbjct: 354 PLARPGHLS-HLERPNYDFARYL 375
>gi|184158930|ref|YP_001847269.1| phenylpropionate dioxygenase [Acinetobacter baumannii ACICU]
gi|332874711|ref|ZP_08442583.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|384144050|ref|YP_005526760.1| phenylpropionate dioxygenase [Acinetobacter baumannii MDR-ZJ06]
gi|385238400|ref|YP_005799739.1| phenylpropionate dioxygenase [Acinetobacter baumannii TCDC-AB0715]
gi|387123137|ref|YP_006289019.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|407933553|ref|YP_006849196.1| phenylpropionate dioxygenase [Acinetobacter baumannii TYTH-1]
gi|416144945|ref|ZP_11600062.1| phenylpropionate dioxygenase [Acinetobacter baumannii AB210]
gi|417569342|ref|ZP_12220200.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC189]
gi|417575898|ref|ZP_12226746.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|417870246|ref|ZP_12515213.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH1]
gi|417874283|ref|ZP_12519136.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH2]
gi|417877719|ref|ZP_12522402.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH3]
gi|417884404|ref|ZP_12528604.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH4]
gi|421204290|ref|ZP_15661418.1| phenylpropionate dioxygenase [Acinetobacter baumannii AC12]
gi|421536270|ref|ZP_15982519.1| phenylpropionate dioxygenase [Acinetobacter baumannii AC30]
gi|421631399|ref|ZP_16072074.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii OIFC180]
gi|421689617|ref|ZP_16129297.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-143]
gi|421704274|ref|ZP_16143719.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii ZWS1122]
gi|421708052|ref|ZP_16147431.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii ZWS1219]
gi|421794056|ref|ZP_16230165.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Naval-2]
gi|424051564|ref|ZP_17789096.1| hypothetical protein W9G_00253 [Acinetobacter baumannii Ab11111]
gi|424062605|ref|ZP_17800091.1| hypothetical protein W9M_03427 [Acinetobacter baumannii Ab44444]
gi|425755100|ref|ZP_18872927.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Naval-113]
gi|445473598|ref|ZP_21452865.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii OIFC338]
gi|445480183|ref|ZP_21455441.1| Rieske [2Fe-2S] domain / ring hydroxylating alpha subunit,
catalytic domain multi-domain protein [Acinetobacter
baumannii Naval-78]
gi|183210524|gb|ACC57922.1| Phenylpropionate dioxygenase [Acinetobacter baumannii ACICU]
gi|323518901|gb|ADX93282.1| phenylpropionate dioxygenase [Acinetobacter baumannii TCDC-AB0715]
gi|332737086|gb|EGJ68041.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|333367061|gb|EGK49075.1| phenylpropionate dioxygenase [Acinetobacter baumannii AB210]
gi|342228204|gb|EGT93103.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH1]
gi|342229005|gb|EGT93875.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH2]
gi|342234370|gb|EGT99031.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH4]
gi|342235055|gb|EGT99680.1| phenylpropionate dioxygenase [Acinetobacter baumannii ABNIH3]
gi|347594543|gb|AEP07264.1| phenylpropionate dioxygenase [Acinetobacter baumannii MDR-ZJ06]
gi|385877629|gb|AFI94724.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|395553565|gb|EJG19571.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC189]
gi|395571387|gb|EJG32046.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|398326209|gb|EJN42359.1| phenylpropionate dioxygenase [Acinetobacter baumannii AC12]
gi|404557783|gb|EKA63078.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-143]
gi|404665120|gb|EKB33083.1| hypothetical protein W9G_00253 [Acinetobacter baumannii Ab11111]
gi|404671286|gb|EKB39141.1| hypothetical protein W9M_03427 [Acinetobacter baumannii Ab44444]
gi|407190108|gb|EKE61327.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii ZWS1122]
gi|407190665|gb|EKE61880.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii ZWS1219]
gi|407902134|gb|AFU38965.1| phenylpropionate dioxygenase [Acinetobacter baumannii TYTH-1]
gi|408693862|gb|EKL39458.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii OIFC180]
gi|409985817|gb|EKO42021.1| phenylpropionate dioxygenase [Acinetobacter baumannii AC30]
gi|410395392|gb|EKP47693.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Naval-2]
gi|425495550|gb|EKU61730.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Naval-113]
gi|444769023|gb|ELW93222.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii OIFC338]
gi|444772127|gb|ELW96250.1| Rieske [2Fe-2S] domain / ring hydroxylating alpha subunit,
catalytic domain multi-domain protein [Acinetobacter
baumannii Naval-78]
Length = 396
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 174/395 (44%), Gaps = 32/395 (8%)
Query: 4 SSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTD 63
+S S+ L+ Q++ NP I ++ P+ YT + E + ++W VG+
Sbjct: 2 NSRVSQQLITVQQVDNVLNP---ITESNGMPNLAYTSNEYFNFERDNILSKTWVCVGFAS 58
Query: 64 QLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGW 122
L + V+ R+ G++H FHNVC H IL G + C YH W
Sbjct: 59 DLPKKSYVKPVNFMGMPLVMMRNKEGELHVFHNVCSHRGMILVQQEGTIEGVIRCQYHSW 118
Query: 123 TYGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDS 177
+Y L+G L + GI KD F ++ GL L A W V +N+ +A EE +
Sbjct: 119 SYDLNGNLKGTPHVGGINQHKDERFKCEKHGLKALRSAVWMDMVFVNISGDAPTFEEHIA 178
Query: 178 NVVA--NEWLGGSS-EILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+V +LG + E++ + + S+ E ++ NWK+ +NY + YH+P+ H
Sbjct: 179 PLVERWKPFLGENGLELIRSSKVGSTF------ELPVKSNWKLTVENYCE-AYHLPWVHP 231
Query: 235 GLASGLQL-DSYSTSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPN 284
L + +L D Y+ ++ + Q + T TH + S A Y ++PN
Sbjct: 232 ALNTYSKLEDHYNIMFEDRFAGQGSYKYNLSATAGTHLPKFPSWPEDQLRHAEYVAVFPN 291
Query: 285 FMINRYGPWMDTNLVIPLAPTRC--KVVFDYFLDGSLKDD-KAFIEQSLKDSEQVQMEDI 341
++ ++ P+AP + K+ Y D SL A E +L+ + V ED+
Sbjct: 292 VLLGIQADHAFAMMIDPIAPEQTIEKLRLYYVGDESLDPKYDACREATLESWKVVFAEDV 351
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
E +Q+G SP + G ++P ++ + F L
Sbjct: 352 FAVETMQKGRHSPGFGGGVFSPEMDLPTHFFQKWL 386
>gi|398836168|ref|ZP_10593515.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. YR522]
gi|398213726|gb|EJN00318.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. YR522]
Length = 428
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 21 FNPQIP-------IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS 73
F+P+ P ++ A+ PS YTDP+ E+ ++FY++W VG+ ++++P DF +
Sbjct: 7 FHPRTPDSSYADLVQDAVVDPS-LYTDPAIFEAEMDKIFYKTWVWVGHESEIRNPGDFKT 65
Query: 74 GRIGEVEFVVCRDDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLK 132
+IG +V RD +GKI+ N CRH A++ G + F CPYH W+YGLDG L
Sbjct: 66 AQIGRQPVIVVRDKSGKINVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRG 125
Query: 133 ATRITGIKDFNVK-EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI 191
G +D K + L L V +G + + ++ E+ + A +W+ ++
Sbjct: 126 LPYPEGYEDVVEKADLPLQNLRVGAYGGMIFASFNQDIEPLEDFLGH--AKQWI----DL 179
Query: 192 LSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
G + +++ + NWK+ +N D GYH P HK S + ++
Sbjct: 180 FMKQGAGFPIKVQGEHKFSFKGNWKIQLENTTD-GYHFPVVHKTFLSSVDAET 231
>gi|398787353|ref|ZP_10549800.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Streptomyces auratus AGR0001]
gi|396993002|gb|EJJ04088.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Streptomyces auratus AGR0001]
Length = 388
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 148/350 (42%), Gaps = 18/350 (5%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP E ++F R W + L P F + R+G ++ R+ +G + AF N+
Sbjct: 31 YTDPEIFRQEQEKIFERLWFCAVRSADLDKPGAFRTVRVGRESVLITRNRSGALRAFLNI 90
Query: 98 CRHHASILAT-GSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH + L T SG+ + CPYH WTY LDG L+ A + + D + E GLV + +
Sbjct: 91 CRHRGARLCTEESGEVRRNLQCPYHAWTYDLDGRLVAAPNLQKMPDVDRTERGLVTVPLR 150
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
W + + + E E+ A E LG ++ + L+ R Y + NW
Sbjct: 151 EWLGYAWVCLADEPPSFEDTVIG-AAIERLGDTASLDRYR--TEGLALGKRLTYDVHANW 207
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQRCESGSTEGTDDTHRLG 273
K+ +N+++ YH H L L D ++ Y E+ + D T G
Sbjct: 208 KLIIENFME-CYHCATIHPELTEVLPEFADGFAAQYYVGHGAAFAEAATGFTVDGTEGFG 266
Query: 274 ---------SKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
+ YA + P +N + + + P+AP R V D+ + D
Sbjct: 267 RLPGIEDTQDRRYYAITVRPQVFVNLVPDHVIVHRMFPMAPDRTVVECDWLYLPEVVDSG 326
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
A + +S++ +V +D CE Q + S AY +G E + FH
Sbjct: 327 ADVSKSVELFHRVNAQDFDACERTQPAMSSRAYRAGGVLVPSEHHIGAFH 376
>gi|393220882|gb|EJD06367.1| ISP domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 329
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 145/347 (41%), Gaps = 28/347 (8%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
I + + T P+ W D LE +F +SW + +T + P D+ SG ++ +
Sbjct: 5 IDLHRPKTLPARWMRDEGIFQLEKRAIFSKSWLLASHTSRFTKPGDYISGSY-VFDYFII 63
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFN 143
D +G AFHNVCRH A + T + V C YHGW+Y G L+KA + + F+
Sbjct: 64 LDRDGNFQAFHNVCRHRAFPVVTKPLGSTLVVGCRYHGWSYNARGDLVKAPKFDTVPGFD 123
Query: 144 VKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
K GL + T F+ +N + N VA + G N ++ +
Sbjct: 124 KKANGLFKVHTHVTQQGFIFINF--------DASPNPVAFDDYFGRLPYEWRNFDKNNYT 175
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGS 262
Y + + NWK F D Y + YH H G A L L+ Y + + +
Sbjct: 176 YAYSWKIEGDYNWKTFMDGYQE-CYHCTVGHPGFAQTLDLNQYRVTPLQNAARHEVPIAK 234
Query: 263 TEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDD 322
T + T P + T +P++ T+ ++ +D + ++ +
Sbjct: 235 TRTDNST-------------PPVRVTVTDTMWYTMRTVPISATKTRMEYDVYRRKNVSYE 281
Query: 323 KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG-RYAPSVEQT 368
+ + + +K EQV+ ED LC QRGL + Y G R PSV +
Sbjct: 282 E--LREFMKFYEQVEKEDYDLCVATQRGLNAGIYSHGFRELPSVHSS 326
>gi|443670813|ref|ZP_21135939.1| putative ring hydroxylating dioxygenase subunit [Rhodococcus sp.
AW25M09]
gi|443416555|emb|CCQ14276.1| putative ring hydroxylating dioxygenase subunit [Rhodococcus sp.
AW25M09]
Length = 383
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 163/381 (42%), Gaps = 25/381 (6%)
Query: 21 FNPQIPIEKALTPP--SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGE 78
P++ E L P Y DP++ E ++F + W +D + DP +F + ++G
Sbjct: 4 LEPELAPEPTLLPTLGGETYIDPAYFVREQAQIFEQMWFCAIRSDDIPDPGNFRTVQVGR 63
Query: 79 VEFVVCRDDNGKIHAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATR 135
+V R+ G + AF N+CRH + L A+G+ +++ F CPYH WTY LDG L+ A
Sbjct: 64 ESVLVSRNRKGGVTAFFNICRHRGATLCTEASGTVRRN-FQCPYHAWTYDLDGKLIAAPN 122
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ + + E+GL + V W +V + + A EE V E LGG I S +
Sbjct: 123 LIDMPMIDRVEYGLRKVHVREWLGYVWVCVADTAPSFEETVQGDV-RERLGGLGAIDSYS 181
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLDSYSTS 248
SL+ R Y ++ NWK+ +N+++ YH H L A GL SY
Sbjct: 182 M--DSLALGRRIVYDVKANWKLIVENFME-CYHCATIHPELTEVLPEFADGLAAQSYVGH 238
Query: 249 LYEKVS-IQRCESGSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLA 303
E S I + G D +G + YA + P +N + + + P+A
Sbjct: 239 GAEFGSDIAGFTVDGSHGFDALDGIGEDRDRRYYALTVRPTVFVNLVPDHVIIHRMFPMA 298
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSE---QVQMEDIILCEGVQRGLESPAYCSGR 360
R V D+ ++ D + E K E +V +D CE Q + S Y G
Sbjct: 299 VDRTVVECDWLYVPAVVADPSNAETMNKSVELFHRVNEQDFEACERCQPAMSSRMYRDGG 358
Query: 361 YAPSVEQTMYHFHSLLHCNLT 381
E + FH + L
Sbjct: 359 VLVPAEHHIGEFHDWVASRLA 379
>gi|348170300|ref|ZP_08877194.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharopolyspora spinosa NRRL 18395]
Length = 380
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 24/345 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P S YTD + +E R+F R+W ++ + F S +G ++ R +G +
Sbjct: 20 TLPGSHYTDTAVFEIEQSRIFQRNWFAAARSNDMATLGSFRSVDVGGESVLIVRARDGAL 79
Query: 92 HAFHNVCRHHASILA---TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF NVCRH + L +GS ++S CPYH WTYGLDG+L+ A + + D N E+G
Sbjct: 80 RAFLNVCRHRGARLCLEESGSVRRS-LQCPYHAWTYGLDGSLIAAPNLNSMNDVNRDEYG 138
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L+ + + W V + + E + VA G +++ I+ L R
Sbjct: 139 LIGVALQEWLGTVWVCLADEPPSFADTVQAAVAARL--GDPDVIDGWRIE-DLVVGRRIT 195
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLY--------EKVS--IQ 256
Y ++ NWK+ +N+++ YH H L L D Y+ + E+++
Sbjct: 196 YDVKANWKLIVENFME-CYHCATIHPELTEVLPEFADGYAAQYFVGHGAEFGEEITGFTV 254
Query: 257 RCESG--STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+SG + G D+ H AI I P IN + + + P+A R V D+
Sbjct: 255 DGQSGFETLSGVDEDHDRRYYAIT--INPQAFINLVPDHVIFHRMYPVAVDRTIVECDWL 312
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ D A + +S++ +V +D CE Q + S AY SG
Sbjct: 313 YTQEVIDTGADLSRSVELFHRVNQQDFDACERCQPAMSSRAYASG 357
>gi|398977641|ref|ZP_10687275.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM25]
gi|398137799|gb|EJM26839.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM25]
Length = 389
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 160/369 (43%), Gaps = 31/369 (8%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+A T PS ++ D S E +F ++W V G+ + +P F + + VV ++
Sbjct: 22 EQAFTLPSRYFYDDSLFRAERDNIFMKAWHVAGHVSEFAEPGQFVVTDLFDQSVVVAKNR 81
Query: 88 NGKIHAFHNVCRHHAS-ILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVK 145
G+IH FHNVC+H + +L G V C YH W Y +DG+L A R +K+F +
Sbjct: 82 QGQIHGFHNVCQHRGNRLLEERRGTTGGVVRCAYHSWCYEMDGSLRGAPRCERMKNFELA 141
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+F + + G F+ N+ A ++ + G + E+ + + + +
Sbjct: 142 QFNIPQVRTEELGGFIYFNLDPNAPSLRDL--------FPGANEEMRRVFPDLADMRLIE 193
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYA---HKGLASGLQLDSYS----TSLYEKVSIQRC 258
++ + NWKV DN ++G YH + H LA + Y + + +
Sbjct: 194 EQDVIVPANWKVIMDNSIEG-YHFKLSGPCHIDLAKLIDFKGYQLIKRDNWWTYAAPANL 252
Query: 259 ESGSTEGTDDTHRLGSKAIYAFI--YPN--FMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+ G + + I +PN F + ++ + ++IPL R + F Y+
Sbjct: 253 SATEAYGVPLKSEPNPQECFFNIGMWPNNTFYTFPFSEFLGSFIMIPLDAERSLLRFGYY 312
Query: 315 LDGSLKDDKAFIEQSLK-DSEQVQMEDIILCEGVQRGLESPAYCSGRY------APSVEQ 367
S + A +K +E + EDI L VQ+GL S Y GRY + E
Sbjct: 313 --SSNPETAAVSTACMKWMNEDLGPEDIALNISVQKGLRSLGYDQGRYMIDAQRSNESEH 370
Query: 368 TMYHFHSLL 376
++HFH L+
Sbjct: 371 LVHHFHRLV 379
>gi|421649626|ref|ZP_16090017.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii OIFC0162]
gi|425749742|ref|ZP_18867709.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii WC-348]
gi|408513630|gb|EKK15248.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii OIFC0162]
gi|425487144|gb|EKU53502.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii WC-348]
Length = 396
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 174/395 (44%), Gaps = 32/395 (8%)
Query: 4 SSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTD 63
+S S+ L+ Q++ NP I ++ P+ YT + E + ++W VG+
Sbjct: 2 NSRVSQQLITVQQVDNVLNP---ITESNGMPNLAYTSNEYFNFERDNILSKTWVCVGFAS 58
Query: 64 QLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGW 122
L + V+ R+ G++H FHNVC H IL G + C YH W
Sbjct: 59 DLPKKSYVKPVNFMGMPLVMMRNREGELHVFHNVCSHRGMILVQEEGTIEGVIRCQYHSW 118
Query: 123 TYGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDS 177
+Y L+G L + GI KD F ++ GL L A W V +N+ +A EE +
Sbjct: 119 SYDLNGNLKGTPHVGGINQHKDERFKCEKHGLKALRSAIWMDMVFVNISGDAPTFEEHIA 178
Query: 178 NVVA--NEWLGGSS-EILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+V +LG + E++ + + S+ E ++ NWK+ +NY + YH+P+ H
Sbjct: 179 PLVERWKPFLGENGLELIRSSKVGSTF------ELPVKSNWKLTVENYCE-AYHLPWVHP 231
Query: 235 GLASGLQL-DSYSTSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPN 284
L + +L D Y+ ++ + Q + T TH + S A Y ++PN
Sbjct: 232 ALNTYSKLEDHYNIMFEDRFAGQGSYKYNLSATAGTHLPKFPSWPEDQLRHAEYVAVFPN 291
Query: 285 FMINRYGPWMDTNLVIPLAPTRC--KVVFDYFLDGSLKDD-KAFIEQSLKDSEQVQMEDI 341
++ ++ P+AP + K+ Y D SL A E +L+ + V ED+
Sbjct: 292 VLLGIQADHAFAMMIDPIAPEQTIEKLRLYYVGDESLDPKYDACREATLESWKVVFAEDV 351
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
E +Q+G SP + G ++P ++ + F L
Sbjct: 352 FAVETMQKGRHSPGFGGGVFSPEMDLPTHFFQKWL 386
>gi|383648839|ref|ZP_09959245.1| [2Fe-2S] protein [Streptomyces chartreusis NRRL 12338]
Length = 376
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 158/370 (42%), Gaps = 19/370 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTDP A E +F W + L P F + +G ++
Sbjct: 6 LPESLIATLPGSSYTDPEIFAQEQEHIFEAMWFCAVRSADLAAPGAFRTVEVGRESILIT 65
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + + AF NVCRH + L T +G+ K F CPYH WTY L G L+ A +T + D
Sbjct: 66 RARDNSVRAFLNVCRHRGAKLCTAETGEVKRAFQCPYHAWTYDLTGKLVAAPNLTKMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ E+GL + W +V + + + +EV +VVA G +E + ID +L
Sbjct: 126 SRTEYGLAAVATREWLGYVWVCLAADPPPFDEVVGDVVARL---GDTESIEHYDID-NLE 181
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ---R 257
R Y ++ NWK+ +N+++ YH H L L D Y+ Y +
Sbjct: 182 VGARIVYDVKANWKLIVENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGSE 240
Query: 258 CESGSTEGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
+ + +G++ R+ + YA + P IN + + + P+A R V
Sbjct: 241 IKGFTVDGSEGLDRIPGVTEDQDRRYYAITVRPQVFINLVPDHVIFHRMYPVAADRTIVE 300
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
D+ + + + +S++ ++V +D CE Q + S Y G E +
Sbjct: 301 CDWLYLKHVVESGKDVSRSVELFDRVNRQDFDACERCQPAMSSRLYAKGGVLVPSEHHIG 360
Query: 371 HFHSLLHCNL 380
FH+ + L
Sbjct: 361 EFHAFVQERL 370
>gi|163847903|ref|YP_001635947.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222525779|ref|YP_002570250.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163669192|gb|ABY35558.1| Rieske (2Fe-2S) domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222449658|gb|ACM53924.1| Rieske (2Fe-2S) domain protein [Chloroflexus sp. Y-400-fl]
Length = 371
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 156/362 (43%), Gaps = 35/362 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
A T P W+T P A E R+F W VG + + + + + ++ R+ +G
Sbjct: 13 AYTLPRVWFTSPDVFAREQERIFATQWMCVGRSADIPEAGSYCLIEVAGESLILLRNHDG 72
Query: 90 KIHAFHNVCRHHASILATGSGKK--SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+I+A +NVCRH + L T + +CPYH WTY LDGTL A + F ++
Sbjct: 73 QIYAHYNVCRHRGARLCTEMQGRFHETIMCPYHAWTYRLDGTLAAARYMQDAPGFRRDDW 132
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
L+ VA W F+ +++ + E + ++ G + + + L R
Sbjct: 133 PLLSAAVAEWDGFIFVSLADQPQPFTEAFAPLI------GKFQAWEM----ARLRRGARI 182
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAH-------------KGLASGLQLDSYSTSLYEKVS 254
Y + NWK+ NY + YH P H L SG L Y +E ++
Sbjct: 183 TYEVAANWKLIVANYSE-CYHCPLIHPELVAISPWQSGRNDLTSGPFLGGYMELTHESMT 241
Query: 255 IQ---RCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF 311
+ R +D R+ Y I+PN +++ + +M + +IP P ++
Sbjct: 242 LNGQTRRPPLPNLPVEDHKRV----YYYSIFPNLLLSLHPDYMMAHRLIPRRPDATTIIC 297
Query: 312 DYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
+++ D + F +++ ++ +D +CE Q+G+ S AY G YA S E ++
Sbjct: 298 EWYFDPDVMAASDFDPSDAVEFWDRTNRQDWHVCELSQQGISSRAYRPGPYAQS-EGLLW 356
Query: 371 HF 372
F
Sbjct: 357 QF 358
>gi|422319304|ref|ZP_16400380.1| ring-hydroxylating dioxygenase [Achromobacter xylosoxidans C54]
gi|317406013|gb|EFV86289.1| ring-hydroxylating dioxygenase [Achromobacter xylosoxidans C54]
Length = 381
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 152/334 (45%), Gaps = 20/334 (5%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+ + P+S Y D + L EL F VVG + Q+++P + + FVV RD
Sbjct: 28 RVVQVPASVYMDNAVLERELETAFRDYPLVVGASTQVREPGSYLLSPWDRLPFVVVRDKG 87
Query: 89 GKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G + AF NVCRH + L +G+ K+ +F CP+HGW YGLDG L T+ D + +
Sbjct: 88 GALRAFLNVCRHRGARLVSGNEKELKFFTCPFHGWVYGLDGELKGVTKPYNFPDLDCGKH 147
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
LV L V V L+ A ++D+++ A+ SE ++ +D LS R+
Sbjct: 148 KLVELAVTERSGLVWLHPTPGAT--IDLDASLGAD-----MSEEIAGFKLD-ELSLHSRK 199
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL----QLDSYSTSLYEKVSIQRCESGST 263
T+ NWK+ YL+ YHVP HK + + + L+ +++ +
Sbjct: 200 VSTLNANWKLLLKTYLE-RYHVPILHKNTIGPVFEKGVIAHFEHGLHIRIAAAKTNLMDA 258
Query: 264 EGTDDT--HRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF---LDGS 318
D L +++ ++PN + + + N P+AP + D D +
Sbjct: 259 AAADPQSWRILDYASVFYTLFPNTFLINHANIVSLNSFYPIAPDKTIWTHDMLYREADYA 318
Query: 319 LKDDKAFIEQSLKDSEQV-QMEDIILCEGVQRGL 351
++ +A + Q + + V ED + EGVQ GL
Sbjct: 319 GEEGQATLAQRFGNIDAVFHREDFGIVEGVQAGL 352
>gi|269836190|ref|YP_003318418.1| Rieske (2Fe-2S) domain-containing protein [Sphaerobacter
thermophilus DSM 20745]
gi|269785453|gb|ACZ37596.1| Rieske (2Fe-2S) domain protein [Sphaerobacter thermophilus DSM
20745]
Length = 373
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 24/366 (6%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
A T P +Y DP E R+F R W VG D + P D+ + + +V R +G
Sbjct: 12 ATTLPGRYYHDPDIYRQEQERLFGRLWVCVGRADAIPQPGDYLTVDLAGESVLVVRGRDG 71
Query: 90 KIHAFHNVCRHHASILATGS-GKKSWFV-CPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ AF NVCRH + L T G + + C YH W+YGLDG LL A + + F+
Sbjct: 72 VVRAFLNVCRHRGARLCTEPCGHVAGAIQCRYHAWSYGLDGRLLGAPNLRDVDAFDRDAH 131
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCR 206
GL+P+ WG + L++ ++ E + + E+ ++ ++L+
Sbjct: 132 GLLPVACDQWGGLLWLSLAEDPPPLAEQLEPAILRRF----GELDTVGRYRLATLAVGHS 187
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLA-------SGLQLDSYSTSLYEKVSIQRCE 259
Y + CNWK+ +N+++ YH H L+ +GL + + + +
Sbjct: 188 ITYELACNWKLVVENFME-CYHCAVTHPELSRAVPSFKAGLAYQQGVGARFAEGVVALTL 246
Query: 260 SGSTEGTD----DTHRLGSKAIYAFI-YPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
SG T LG+ Y F+ PN +N + + + PL PT+ +VV D+
Sbjct: 247 SGQTTRPPLPGLAEQDLGT--YYGFVLLPNVFVNLTPDHVVVHRLEPLGPTQTRVVCDWL 304
Query: 315 LDGSLKDDKAFIEQ-SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
D ++ + F ++ + V +D +CE Q+ + S AY +G +E + F+
Sbjct: 305 FDPAVMAEPGFDPMDAVAFFDLVNRQDWEMCELCQQNMASRAYRAGGLYVPLEAHIRAFN 364
Query: 374 S-LLHC 378
+L C
Sbjct: 365 DFVLEC 370
>gi|395773877|ref|ZP_10454392.1| [2Fe-2S] protein [Streptomyces acidiscabies 84-104]
Length = 375
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 151/364 (41%), Gaps = 20/364 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTDP A E R+F W L P F + +G +V
Sbjct: 6 LPDSLIATLPGSSYTDPGIFAQEQERIFETMWFCAVRAADLPKPGAFRTVDVGRESILVT 65
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGK--KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + + A+ NVCRH + L T K F CPYH WTY L G L+ A +T + D
Sbjct: 66 RARDNSVRAYFNVCRHRGAKLCTEEAGEVKRAFQCPYHAWTYDLTGKLVAAPNLTKMPDV 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSL 201
E+GLV + V W +V + + + E+ D E LG + SI+ D ++L
Sbjct: 126 GRTEYGLVSVHVREWLGYVWVCLAENPPSFED-DVMGAVVERLGDTE---SIDHYDMANL 181
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYE------KV 253
S R Y ++ NWK+ +N+++ YH H L L D Y+ Y
Sbjct: 182 SLGKRIVYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGD 240
Query: 254 SIQRCESGSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+Q +EG D + + YA + P IN + + + P+A R V
Sbjct: 241 DVQGFTVDGSEGLDRIPGVAEDQDRRYYAITVKPQVFINLVPDHVILHRMYPMAADRTVV 300
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ + + + +S++ +V +D CE Q G+ S Y G E +
Sbjct: 301 ECDWLYLPHVVESGKDVSRSVELFHRVNQQDFDACERTQPGMHSRMYAKGGVLVPSEHHI 360
Query: 370 YHFH 373
FH
Sbjct: 361 GEFH 364
>gi|302540708|ref|ZP_07293050.1| Rieske family iron-sulfur cluster-binding protein [Streptomyces
hygroscopicus ATCC 53653]
gi|302458326|gb|EFL21419.1| Rieske family iron-sulfur cluster-binding protein [Streptomyces
himastatinicus ATCC 53653]
Length = 385
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 152/357 (42%), Gaps = 20/357 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P WYT PS E +F W + L P F + ++G ++ R+ G++
Sbjct: 18 TLPGHWYTSPSVFRQEQEHLFEAMWFCAVRSADLDRPGAFRTVQVGRESVLITRNRAGEL 77
Query: 92 HAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF N+CRH + L T G+ ++S CPYH WTY LDG L A + + D + E G
Sbjct: 78 RAFLNICRHRGARLCTEESGTVRRS-LQCPYHAWTYDLDGRLTAAPNLQSMPDVDRTERG 136
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L+P+ + W + + + E EE VA G +E + G+ + LS R +
Sbjct: 137 LLPVRLREWLGYAWVCLADEPPSFEETVVGAVAERL--GDAEAVERYGV-AGLSLGRRID 193
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQRCESG---ST 263
Y I+ NWK+ +N+++ YH H L L D + + + E +
Sbjct: 194 YDIKANWKLIVENFME-CYHCATIHPELTEVLPEFADGLAAQYFVGHGAEFAEEAQGFTV 252
Query: 264 EGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
+G+ R+ A YA + P IN + + + PLA R V D+
Sbjct: 253 DGSAGFDRITGIADEQDRRYYAITVQPQVFINLVPDHVIFHRMFPLAADRTLVSCDWLYV 312
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+ + + +S++ +V +D CE Q + S AY G E + FH
Sbjct: 313 PDVVASERDLSKSVELFHRVNTQDFDACERTQPAMHSRAYRRGGVLVPSEHHIGAFH 369
>gi|398866799|ref|ZP_10622274.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
gi|398239051|gb|EJN24769.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
Length = 411
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 168/383 (43%), Gaps = 54/383 (14%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFV--- 82
PI +A + +YT+ + LE +V ++W VG+ L +G + V+F+
Sbjct: 34 PIHEATGLSNEFYTEQRYFELERDQVLGKTWACVGFASDLGK-----AGSVKPVDFMGLP 88
Query: 83 --VCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI 139
+ R+ G + FHNVC H L +G+ + CPYH WTY L+G L + GI
Sbjct: 89 LLLMRNREGLVQVFHNVCSHRGMKLVEEAGEVQGVIRCPYHSWTYDLNGGLRGTPHVGGI 148
Query: 140 ---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
KD F ++ GL + A W V +N+ +A E++ + + W ++ L
Sbjct: 149 DQHKDERFACEKHGLKAIRSAIWMDMVFINLSGDAQSLEDMLAPLT-TRW----TQFLGE 203
Query: 195 NGIDSSLSYLCRR------EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYST 247
+G +S L RR I CNWK+ +NY + YH+P+ H L S +L D Y+
Sbjct: 204 DG----MSLLRRRPGHDATTLDINCNWKLAVENYCEA-YHLPWVHPSLNSYSRLEDHYNI 258
Query: 248 SLYEKVSIQRCESGSTEGTDDTH----------RLGSKAIYAFIYPNFMINRYGPWMDTN 297
+ + Q + + TH RL + AF +PN ++ G D
Sbjct: 259 IFDQHFAGQGSYAYNLSDVAGTHLPKFPAWPLDRLRNAEYVAF-FPNVLL---GIQADHA 314
Query: 298 LVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ-------SLKDSEQVQMEDIILCEGVQRG 350
+ L P ++ + DD A E+ L+ + V EDI EG+Q+G
Sbjct: 315 FAMQLEPVSPGRTIEHLRLFYVGDDAATSEEFSACREAILESWKVVFAEDISSVEGMQKG 374
Query: 351 LESPAYCSGRYAPSVEQTMYHFH 373
SP Y G ++P ++ + FH
Sbjct: 375 RHSPGYKGGAFSPEMDIPTHFFH 397
>gi|169795208|ref|YP_001713001.1| oxygenase; choline monooxygenase [Acinetobacter baumannii AYE]
gi|213158129|ref|YP_002320180.1| rieske 2Fe-2S family protein [Acinetobacter baumannii AB0057]
gi|301346095|ref|ZP_07226836.1| rieske 2Fe-2S family protein [Acinetobacter baumannii AB056]
gi|301512185|ref|ZP_07237422.1| rieske 2Fe-2S family protein [Acinetobacter baumannii AB058]
gi|301596251|ref|ZP_07241259.1| rieske 2Fe-2S family protein [Acinetobacter baumannii AB059]
gi|417573852|ref|ZP_12224706.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Canada BC-5]
gi|421643376|ref|ZP_16083871.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-235]
gi|421647438|ref|ZP_16087855.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-251]
gi|421660928|ref|ZP_16101110.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Naval-83]
gi|421700747|ref|ZP_16140260.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-58]
gi|421802033|ref|ZP_16237987.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Canada BC1]
gi|169148135|emb|CAM85998.1| putative oxygenase; putative choline monooxygenase [Acinetobacter
baumannii AYE]
gi|213057289|gb|ACJ42191.1| rieske 2Fe-2S family protein [Acinetobacter baumannii AB0057]
gi|400209420|gb|EJO40390.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Canada BC-5]
gi|404569398|gb|EKA74485.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-58]
gi|408508517|gb|EKK10200.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-235]
gi|408516543|gb|EKK18116.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii IS-251]
gi|408703537|gb|EKL48932.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Naval-83]
gi|410404421|gb|EKP56488.1| ring hydroxylating alpha subunit, catalytic domain protein
[Acinetobacter baumannii Canada BC1]
Length = 396
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 174/395 (44%), Gaps = 32/395 (8%)
Query: 4 SSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTD 63
+S S+ L+ Q++ NP I ++ P+ YT + E + ++W +G+
Sbjct: 2 NSRVSQQLITVQQVDNVLNP---ITESNGMPNLAYTSNEYFNFERDNILSKTWVCIGFAS 58
Query: 64 QLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGW 122
L + V+ R+ G++H FHNVC H IL G + C YH W
Sbjct: 59 DLPKKSYVKPVNFMGMPLVMMRNREGELHVFHNVCSHRGMILVQEEGTIEGVIRCQYHSW 118
Query: 123 TYGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDS 177
+Y L+G L + GI KD F ++ GL L A W V +N+ +A EE +
Sbjct: 119 SYDLNGNLKGTPHVGGINQHKDERFKCEKHGLKALRSAIWMDMVFVNISGDAPTFEEHIA 178
Query: 178 NVVA--NEWLGGSS-EILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+V +LG + E++ + + S+ E ++ NWK+ +NY + YH+P+ H
Sbjct: 179 PLVERWKPFLGENGLELIRSSKVGSTF------ELPVKSNWKLTVENYCE-AYHLPWVHP 231
Query: 235 GLASGLQL-DSYSTSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPN 284
L + +L D Y+ ++ + Q + T TH + S A Y ++PN
Sbjct: 232 ALNTYSKLEDHYNIMFEDRFAGQGSYKYNLSATAGTHLPKFPSWPEDQLRHAEYVAVFPN 291
Query: 285 FMINRYGPWMDTNLVIPLAPTRC--KVVFDYFLDGSLKDD-KAFIEQSLKDSEQVQMEDI 341
++ ++ P+AP + K+ Y D SL A E +L+ + V ED+
Sbjct: 292 VLLGIQADHAFAMMIDPIAPEQTIEKLRLYYVGDESLDPKYDACREATLESWKVVFAEDV 351
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
E +Q+G SP + G ++P ++ + F L
Sbjct: 352 FAVETMQKGRHSPGFGGGVFSPEMDLPTHFFQKWL 386
>gi|402826563|ref|ZP_10875744.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas sp. LH128]
gi|402259900|gb|EJU10082.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas sp. LH128]
Length = 408
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 157/364 (43%), Gaps = 39/364 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P S YTDP FL LE ++ ++W G+TDQ+ +P +F R V +V R+ G++ A
Sbjct: 37 PGSRYTDPEFLQLEKEMMWDKAWLYAGHTDQVPNPGSWFLTRNSGVPIIVARNLQGEVKA 96
Query: 94 FHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F+N C+H + L T SG+ FVC YHGW+Y LDG L DF++ LV +
Sbjct: 97 FYNTCQHRGAPLVTEESGEGRGFVCGYHGWSYTLDGKLTAVRDKRDFVDFDMSCRSLVQV 156
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
G + +N +A E +G +E L ++ L + R Y ++
Sbjct: 157 RCELLGSLIFINRDPDA---------QPLMEHIGPMAEQLEQFELE-KLRLVDSRSYEVD 206
Query: 213 CNWKVFCDNYLDGGYHVP----------YAHKGLASGLQLDSYSTSLYEKVSIQRCESGS 262
CN KV D +L+ YH+ H+ + L + +S + G+
Sbjct: 207 CNVKVLLDAFLE-VYHIKSIHVNTVDRFLDHRAMIITLWPNGHSRMATPNRRPDWVDPGT 265
Query: 263 T---EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVI----PLAPTRCKVVFDYFL 315
E T + IYPNF++ P T + I P+ R +VV +
Sbjct: 266 VGMPEIASITEFPAKNNVSYQIYPNFIM----PPAPTGIPILQFWPIGTKRTRVVSSWLA 321
Query: 316 -DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP--SVEQTMYHF 372
+ ++ L + E++ ED+ +Q LESP + R P E+ +YH+
Sbjct: 322 PNHDPENPHPLWPTRLSNWERILYEDLQYAPQIQESLESPGF---RAMPLNYQERRIYHW 378
Query: 373 HSLL 376
H L
Sbjct: 379 HEEL 382
>gi|345013159|ref|YP_004815513.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces
violaceusniger Tu 4113]
gi|344039508|gb|AEM85233.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Streptomyces
violaceusniger Tu 4113]
Length = 385
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 20/357 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P WYT P E +F W + P F + ++G ++ R+ G++
Sbjct: 18 TLPGHWYTAPGIFRREQEHLFEAMWFCAVRGADVDRPGAFRTVQVGRESVLITRNRQGEL 77
Query: 92 HAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF N+CRH + L T G+ ++S CPYH WTY LDG L A + + D + E G
Sbjct: 78 RAFLNICRHRGARLCTEESGTVRRS-LQCPYHAWTYDLDGRLTAAPNLQKMPDIDRVERG 136
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
LVP+ + W +V + + ++ EE VA+ LG ++ + G+ + L+ R
Sbjct: 137 LVPVRLREWLGYVWVCLAEDPPSFEETVVGAVADR-LGDAASVERY-GV-AGLALGRRIS 193
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQRCESG---ST 263
Y + NWK+ +N+++ YH H L L D + + + E +
Sbjct: 194 YDVRANWKLIVENFME-CYHCATIHPELTEVLPEFADGLAAQYFVGHGAEFAEEAQGFTV 252
Query: 264 EGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
+G++ R+ A YA + P +N + + + PLAP R V D+
Sbjct: 253 DGSEGFRRIAGIAEEQDRRYYAITVRPQVFLNLVPDHVIMHRMFPLAPDRTLVECDWLYA 312
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+ + + +S++ +V +D CE Q ++S AY G E + FH
Sbjct: 313 PEVVASERDLSKSVELFHRVNAQDFDACERTQPAMDSRAYRDGGVLVPSEHHIGAFH 369
>gi|254456028|ref|ZP_05069457.1| rieske 2Fe-2S family protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083030|gb|EDZ60456.1| rieske 2Fe-2S family protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 397
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 164/385 (42%), Gaps = 43/385 (11%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
I +A P+ Y + +E +VF+ +W VVG + + + D + + ++ RD
Sbjct: 25 INEANGLPNECYLSDEYFKIEREKVFFNNWIVVGVSSSVPEVGDAKPFNLMGIPLLILRD 84
Query: 87 DNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
N KI FHNVC H IL K K+ CPYH W+Y +G L+ + G+ +
Sbjct: 85 KNNKIRVFHNVCSHRGMILVKEECKIKNTIRCPYHSWSYNFNGELIATPHVGGMNIHETE 144
Query: 146 EF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
F L + W + +N+ K E+ + + +W S+ +S D
Sbjct: 145 GFIKSKSNLKEISTHVWMDLIFINVNKNKKDFEQ-SIDPLEKQW----SKFISRE--DQK 197
Query: 201 LSYLCRR----EYTIECNWKVFCDNYLDGGYHVPYAHKGL--ASGLQLDSYSTSLYEKVS 254
L R ++ NWK+ +NY + YH+P+ H L S L+ + L E S
Sbjct: 198 LIRHARDFGYFNMEVKSNWKLAIENYCE-SYHLPWVHPELNRVSNLKDHYHIEDLAETFS 256
Query: 255 IQRCESGSTEGTDDT---------HRLGSKAIYAFIYPNFMI-----NRYGPWMDTNLVI 300
Q S + + + L + Y ++PN M+ + Y W++
Sbjct: 257 GQGSNKYSQQFDGNKKLSIFPNWPNDLYQNSEYVSLFPNVMLGIHVDHFYAFWLE----- 311
Query: 301 PLAPTRCKVVFD--YFLDGSLKDD--KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY 356
PL+ + F+ Y D S D K +++ ++V ED+ EG+Q+G SPAY
Sbjct: 312 PLSNNNTREHFEMYYVGDESASSDEYKEIRKKNFAFWQEVMSEDVAAIEGMQKGRSSPAY 371
Query: 357 CSGRYAPSVEQTMYHFHSLLHCNLT 381
G ++P ++ FH + NLT
Sbjct: 372 NGGNFSPVMDTPTLMFHKWVATNLT 396
>gi|338999173|ref|ZP_08637824.1| Rieske (2Fe-2S) domain protein [Halomonas sp. TD01]
gi|338763910|gb|EGP18891.1| Rieske (2Fe-2S) domain protein [Halomonas sp. TD01]
Length = 428
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 168/417 (40%), Gaps = 74/417 (17%)
Query: 2 SSSSCYSENLVAAQKLVYEFNPQIPIEKALT--PPSSWYTDPSFLALELHRVFYRSWQVV 59
S S+ + L AA+ E Q+ E+A T P +Y D AL++ VF + W
Sbjct: 4 SVSNRMDDPLAAAR----ESTAQMLQERARTFSLPQPFYNDARLFALDMQEVFEKEWLFA 59
Query: 60 GYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASIL-ATGSGKKSWFVCP 118
G T ++ +F + IG+ V+ R G IHAFHNVCRH S L GK + VCP
Sbjct: 60 GMTCEIPTKGNFITLDIGDNPIVIVRGSEGVIHAFHNVCRHRGSRLCVKDKGKVAKLVCP 119
Query: 119 YHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSN 178
YH WTY LDG LL A G DF++ +FGL P+ V T G F+ +N+ D
Sbjct: 120 YHQWTYELDGRLLFAGSDMGT-DFDLNQFGLKPVNVQTAGGFIFINLS---------DEP 169
Query: 179 VVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS 238
+++L L +D ++ + NWK+ +N + YH AH L +
Sbjct: 170 PAIDDFLATLEHYLEPYQMD-NVKVATESSIVEQANWKLVIENNRE-CYHCNGAHPELLN 227
Query: 239 GLQL-----DSYSTSLY-------------EKVSIQRCESGSTEGTDDTHRL-------- 272
LQ D +T Y E+V Q G T L
Sbjct: 228 SLQEFDDTDDPRATPAYKALVARKQADWDAEQVPYQLKRFGKRNRLTRTPLLDGIVSMTM 287
Query: 273 ----GSKAIYAFI------------YPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
GSK + + PN + G V+P+ P + V + +
Sbjct: 288 DGKPGSKKLMGRLSSPDMGSLRILHLPNSWNHFMGDHAVVFRVLPIGPQQTVVTTKWLV- 346
Query: 317 GSLKDDKAFIEQSLKDSEQVQM-------EDIILCEGVQRGLESPAYCSGRYAPSVE 366
K +E D EQ++ +D L E QRG+ S AY G Y+ + E
Sbjct: 347 -----HKDAVEGVDYDPEQLRRVWDATNDQDRQLAEENQRGINSKAYQPGPYSETYE 398
>gi|89054380|ref|YP_509831.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863929|gb|ABD54806.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
Length = 420
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 38/405 (9%)
Query: 1 CSSSSCYSENLVAAQKLVYEFNPQI-----PIEKALTPPSSWYTDPSFLALELHRVFYRS 55
C S SC A + + + PI++A P+S YTDP +A E V +
Sbjct: 24 CPSYSCPRRQTAGAPDMPDDHTRSLADVMAPIDRARGLPNSHYTDPDTIAAENAAVLHAG 83
Query: 56 WQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSW 114
W + + +P D ++ RDD+G + F N+CRH IL K +
Sbjct: 84 WAALAVGADVPEPGDAKPFEFLGQPLLLLRDDDGAVRVFFNICRHRGMILVDAPRKIEGA 143
Query: 115 FVCPYHGWTYGLDGTLLKATRITGIKD-----FNVKEFGLVPLEVATWGPFVLLNMGKEA 169
CPYH W Y G L+ + G + GL + W V +N+ EA
Sbjct: 144 IRCPYHSWCYAKSGKLVATPHVGGPGQNAHPGIDRTTLGLAEVRSHIWRDVVFINLSGEA 203
Query: 170 VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHV 229
E+V ++++ W + + G DS+ + + NWK+ +NY + YH+
Sbjct: 204 APFEDVHADLL-QRW-AEFDQPMHHGGPDSTFTL------DLATNWKLAVENYCES-YHL 254
Query: 230 PYAHKGLASGLQLDSY------------STSLYEKVSIQRCESGSTEGTDD--THRLGSK 275
P+ H L + +L+ + T +Y +++ E G+T D + +
Sbjct: 255 PWVHPSLNTYSRLEDHYHIEAPGQFSGQGTYVYRQLT---GEDGATFPDFDGLSAHWDAG 311
Query: 276 AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQ 335
A Y ++PN ++ + ++ P+A R + + S D ++ + +
Sbjct: 312 AEYISVFPNVLMGVHRDHAYAIVLEPVAHNRTREHVHIYYP-SADTDAGLRAKNARQWKD 370
Query: 336 VQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
V EDI + EG+Q+G + + GR++P+++ + FH+ + L
Sbjct: 371 VFEEDIFVVEGMQKGRAADGFDGGRFSPAMDGPTHLFHAWVAAKL 415
>gi|256396549|ref|YP_003118113.1| Rieske (2Fe-2S) domain-containing protein [Catenulispora acidiphila
DSM 44928]
gi|256362775|gb|ACU76272.1| Rieske (2Fe-2S) domain protein [Catenulispora acidiphila DSM 44928]
Length = 398
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 144/349 (41%), Gaps = 31/349 (8%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDP+ EL VF ++WQ+V + L +P + E +V RD G + AF
Sbjct: 26 ARYYTDPALAEAELRAVFAKTWQLVCHESDLPNPGSRLAAWAAGREVLVVRDAEGGLAAF 85
Query: 95 HNVCRHHASILATGSGKK----SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
NVCRH + L + CPYHGWTY LDG+L+ A I + + GL
Sbjct: 86 LNVCRHRGTRLVDAPEPEPKAAEAIRCPYHGWTYKLDGSLVGAPEGRQIPCLDKPKLGLF 145
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ V ++ FV +N+ A + + + +E++ + + L + E
Sbjct: 146 TVAVESFLGFVFVNVDGTAAPLAQTCAGLAEQVGRYAGAELVPVG--RDRIHDLDKAEVQ 203
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY------------STSLYEKVS---- 254
NWKV DNYL+ GYHVP AH GL L +Y T L +K S
Sbjct: 204 -SANWKVAVDNYLE-GYHVPVAHPGLMRLLDYQNYRITEAAEDYVLFQTPLRDKPSSNWR 261
Query: 255 ---IQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF 311
QR S + R+ YA IYPN +++ Y + IP R V
Sbjct: 262 ERLYQRLTSTMPGLRAEDQRMWR---YAVIYPNTLLDFYPDHVLAWTAIPAGQERVAVPG 318
Query: 312 DYFLDGSLKDDKAFIEQ-SLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
++ + ++ ED L VQ G+ +P + G
Sbjct: 319 GFYTRRGSSRRTRLARRLNIAIGWITSDEDAELLRRVQHGIRTPGFEPG 367
>gi|433774862|ref|YP_007305329.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mesorhizobium australicum WSM2073]
gi|433666877|gb|AGB45953.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mesorhizobium australicum WSM2073]
Length = 391
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 168/374 (44%), Gaps = 46/374 (12%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T PSS Y D +L ++YR+W +V L P F + R+G E ++ RDD G++
Sbjct: 20 TLPSSAYWDQDNYQRDLDAIWYRNWLLVCREADLAQPLAFRTFRVGTQEILLLRDDTGEL 79
Query: 92 HAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
HAFHN CRH S L + G K CPYH W+Y L G L++ + F+ +
Sbjct: 80 HAFHNTCRHRGSQLCQESQGRLKARLITCPYHAWSYSLRGDLVRVPSKSLPDGFDKADHP 139
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + + W FV +N+ ++A + + + ++ E+L ++G ++ R+
Sbjct: 140 LYRVAHSVWRGFVFVNLAEDAASSAQSSFDPASGDFGNWPLEML-VSG------HVLRK- 191
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS----IQRCESGSTE 264
+ CNWK+F +N+ + H P HK L+ + + Y L + ++ ++ + E
Sbjct: 192 -VMNCNWKIFWENF-NECLHCPGVHKDLSRLVPI--YGRGLMSRHDDPEWLRHADNDAPE 247
Query: 265 -------GTDDTHRLG----------------SKAIYAFIYPNFMINRYGPWMDTNLVIP 301
G + R G + YA P+ I + ++ T + P
Sbjct: 248 FSGGLRAGAETWSRDGQTHGPIFPSLTPAERSAGQTYATSLPSMFIVGHVDYVRTVRLTP 307
Query: 302 LAPTRCKVVFDY-FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
L P + ++ ++ F +L + I+ + QV ED +CE Q+GL S + +G
Sbjct: 308 LGPEQTELTAEWLFAPEALAETD--IDNIVAFGTQVLEEDAAICEVNQKGLRSMRHTAGV 365
Query: 361 YAPSVEQTMYHFHS 374
P E ++ FH+
Sbjct: 366 LMPE-EYDLHRFHN 378
>gi|83951703|ref|ZP_00960435.1| Rieske 2Fe-2S domain protein [Roseovarius nubinhibens ISM]
gi|83836709|gb|EAP76006.1| Rieske 2Fe-2S domain protein [Roseovarius nubinhibens ISM]
Length = 362
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 143/334 (42%), Gaps = 20/334 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDP+ E + RSWQ G+ Q+ + D+F+ + R + + AF
Sbjct: 11 AHYYTDPAIFESERKGLLARSWQYAGHASQVPNVGDYFAFELAGENLFCIRGRDEVVRAF 70
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
+NVC+H A L +G VCPYH WTY L G L I + F+ + L ++
Sbjct: 71 YNVCQHRAHELLRETGNARVVVCPYHAWTYELTGELRAGPNIKSVPGFDRSKVCLTEVKC 130
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG-SSEILSINGIDSSLSYLCRREYTIEC 213
+ F+ +N+ +A +EW G EI + ++L L E C
Sbjct: 131 EDFNGFLFVNLDPDAAPM---------DEWYPGVREEIRAYVPHVAALEPLEWVEIPEAC 181
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRL 272
NWKV +NY + YH P HK A G ++ ++Y E + R + T+ +
Sbjct: 182 NWKVSVENYSE-CYHCPINHKTFAEGVVKPETYDIQPLETGYVLRHTTECQNLEKMTYPI 240
Query: 273 GSKAIYA------FIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF 325
+A F++P F Y G ++T A RC V ++ G + D
Sbjct: 241 DMSVEHAGEYRSWFLWPMFSFQCYPGNILNTYHWRAGAVDRCTVWRGWYTPGGAESD-VI 299
Query: 326 IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ +D E EDI L E V RGL+S Y G
Sbjct: 300 RGLAKQDRETTVEEDIHLVESVFRGLKSRGYTPG 333
>gi|302555898|ref|ZP_07308240.1| dioxygenase [Streptomyces viridochromogenes DSM 40736]
gi|302473516|gb|EFL36609.1| dioxygenase [Streptomyces viridochromogenes DSM 40736]
Length = 380
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 20/364 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P YT P LE +F W + +L P F + +G ++
Sbjct: 6 LPESLIATLPGDHYTAPEIFRLEQEHIFESMWFCAARSSELARPGAFRTVDVGRESVLLT 65
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R +G + AF NVCRH + L T SG+ K F CPYH WTY L G L+ A +T + D
Sbjct: 66 RSRDGSVRAFFNVCRHRGAKLCTQESGEVKRAFQCPYHAWTYDLSGKLVAAPNLTKMPDI 125
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKE-AVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
E+GL + V W +V + + + +E V ++VVA G E + G++ SL
Sbjct: 126 GRTEYGLATVAVREWLGYVWVCLAENPPSFEESVIADVVARL---GDVESIERYGVE-SL 181
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ--- 256
R Y ++ NWK+ +N+++ YH H L L D Y+ Y Q
Sbjct: 182 EVGRRIVYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAQFGS 240
Query: 257 RCESGSTEGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ + +G++ R+ + A YA + P IN + + + P+ R V
Sbjct: 241 EVQGFTVDGSEGLDRIPTVAEEQDRRYYAITVRPQVFINLVPDHVIFHRMFPVGVDRTIV 300
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ + + + +S++ ++V +D CE Q + S Y G E +
Sbjct: 301 ECDWLYLKGVVESGRDVSRSVELFDRVNRQDFDACERCQPAMSSRLYAKGGVLVPSEHHI 360
Query: 370 YHFH 373
FH
Sbjct: 361 GEFH 364
>gi|187924350|ref|YP_001895992.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187715544|gb|ACD16768.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 387
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 155/377 (41%), Gaps = 29/377 (7%)
Query: 12 VAAQKLVYEFNP--QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
+A Q LV E + P A P YT P FL LE +F R WQ VG LK P
Sbjct: 8 IAVQALVDELQAGCERPFGDAHAMPPGVYTSPEFLTLEERGIFEREWQCVGRASALKVPG 67
Query: 70 DFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGT 129
D+ + RIG VV RD+ ++ A NVC H S+L G G VCPYH W Y LDG
Sbjct: 68 DYMTARIGAQPVVVLRDEQMQLKAMSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYSLDGA 127
Query: 130 LLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS 189
L A + + F + + L + W ++ + + + H V + L S
Sbjct: 128 LQGAPLMDRQESFCKESYRLPNVRCEEWQGWIYVTLDE---HAPPVRTQ------LAELS 178
Query: 190 EILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ----L 242
++ G+ + E+ NWK+ +N+++ YH+P H+ G S L+
Sbjct: 179 ALIGAYGMSDYVETF-HEEHVWNTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMECP 236
Query: 243 DSYSTSLYEKVSIQRCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNL 298
Y Y ++ + ++T G + A+ A IYP ++ + +
Sbjct: 237 PGYPAFNYHWITKEASLPIGNAHPENTRLAGHWRKTTALLA-IYPTHLVTLTPGYFWYLV 295
Query: 299 VIPLAPTRCKVVFDYFLDGSLKDD---KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPA 355
+ P + F L D A + K ++V ED E V RG+ +P
Sbjct: 296 LQPQGVEHVHIRFGGGLAPEFIADPEANAHMTTLKKLLDEVNAEDKRGVEAVFRGVHAPL 355
Query: 356 YCSGRYAPSVEQTMYHF 372
G +P +E+ Y F
Sbjct: 356 AKPGHLSP-LERPNYDF 371
>gi|317149779|ref|XP_003190357.1| Rieske 2Fe-2S family protein [Aspergillus oryzae RIB40]
Length = 408
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 152/354 (42%), Gaps = 40/354 (11%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY + LE +F + W ++ ++ + + DF S + F + RD + I+
Sbjct: 21 PASWYRSEAMYQLERRAIFSKRWMLLTHSSRFTEQGDFLSFTVANFSFFLIRDRDSNING 80
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ T SG S C YHGW+YGL G L KA R + +F+ + GL+P+
Sbjct: 81 FHNVCRHRAFPVVQTRSGSTSILSCKYHGWSYGLKGNLAKAPRFETVPEFDKSQHGLLPV 140
Query: 153 EV-ATWGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR-- 207
V F+ +N+ G V E+ + E + D + Y
Sbjct: 141 HVHIDKAGFIWVNLQAGSPDVRWEDDFQRI---------DEQPRMQDFDFAGEYTFDHYW 191
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS---TSLYEKVSIQRCESGSTE 264
E ++ NWK +NY + YH +H ++ L Y T+ Y + I + E
Sbjct: 192 EMDLDANWKGVIENY-NECYHCATSHPLISGVSDLPRYRVEPTAGYMEHHI-----FNKE 245
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF-----LDGSL 319
TD + +AI + +P + + +IP++ T+ K+ + + D
Sbjct: 246 QTDAQFK---RAI-TYFFPTTSVTVTDKFFYIQRMIPVSATKSKIENEVYRHRDATDKEF 301
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
D AF Q L ED LC G Q L + + +G P E+ HF
Sbjct: 302 DDINAFYRQVLD-------EDKELCVGAQGNLGTGVFVNGELHPDKEKGPIHFQ 348
>gi|319785387|ref|YP_004144863.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|337270739|ref|YP_004614794.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|433776980|ref|YP_007307447.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mesorhizobium australicum WSM2073]
gi|317171275|gb|ADV14813.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|336031049|gb|AEH90700.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mesorhizobium
opportunistum WSM2075]
gi|433668995|gb|AGB48071.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mesorhizobium australicum WSM2073]
Length = 367
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 148/348 (42%), Gaps = 25/348 (7%)
Query: 25 IPIEKALTPPSS----WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
IP + P S +YTD A E + RSWQ G+ ++ P D+F+ I
Sbjct: 3 IPAMPPIVPLRSLEAHYYTDLEIFAKEQAGLLARSWQFAGHVSLVEKPGDYFTFEIAGQN 62
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
RD +G++ +F+NVC+H A L G+G VCPYH WTY + G L I +
Sbjct: 63 LFCIRDRDGEVRSFYNVCQHRAHELVHGTGNSKLTVCPYHAWTYEISGQLRSGPNIKAVP 122
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-S 199
F+ + L + + FV +N+ +A H +EW E L+ D
Sbjct: 123 GFDRHDVCLPSVRTEVFLGFVFVNLDPDA-HP--------MDEWFSRVREELTEYVPDIE 173
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTS-----LYEKV 253
L L E CNWKV +NY + YH + HK ++G ++ ++Y L
Sbjct: 174 RLKPLEWVEIPERCNWKVSVENYSE-CYHCQFNHKTFSTGVIKPETYDIQPQGYCLRHTT 232
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFD 312
Q E S + K F++P F Y G ++T P V
Sbjct: 233 ECQNLERMSYPIDLAANPRARKYSSWFLWPTFSFQVYPGNVLNTYHWRPKGVDEVVVWRG 292
Query: 313 YF-LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
++ ++G+ D + +++D EDI + E VQRGL+S Y G
Sbjct: 293 WYTINGA--DSDMIRKLAIQDRATTVEEDIHIVESVQRGLKSRGYRPG 338
>gi|86136098|ref|ZP_01054677.1| Rieske 2Fe-2S domain protein [Roseobacter sp. MED193]
gi|85826972|gb|EAQ47168.1| Rieske 2Fe-2S domain protein [Roseobacter sp. MED193]
Length = 362
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 152/359 (42%), Gaps = 36/359 (10%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDP+ A E V R+WQ G+ QL++ D+F+ I + + +G I F
Sbjct: 13 ARYYTDPTVFAAEKAGVLARTWQFAGHASQLENAGDYFAFDIADESLFCIKGRDGVIRTF 72
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
+NVC+H A L +G G VCPYH WTY L G L A + F+ + L +
Sbjct: 73 YNVCQHRAHQLVSGEGSTRVVVCPYHAWTYELTGGLRAAPNTKSVDGFDKSKICLTEVRT 132
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWL-GGSSEILSINGIDSSLSYLCRREYTIEC 213
+ F+ +N+ A + +W G +E+ S + L L + C
Sbjct: 133 EEFLGFIFVNLDAGAKPMD---------DWFPGARAELESFLPHWAELKPLEWVDIPENC 183
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTSLYEKVSIQRCESGSTE-------- 264
NWKV +NY + YH H ++G ++ ++Y ESG +
Sbjct: 184 NWKVSVENYSE-CYHCSLNHPTFSTGVIKPETYDIQPQGYCLRHTTESGPLDQMSYDINS 242
Query: 265 GTDDTHRLGSKAIYAF----IYPNFMINRYGPW--MDTNLVIPLAPTRCKVVFDYFLDGS 318
G ++ + S I+ +YP ++N Y W +D + V VV+ +
Sbjct: 243 GFENNDKYSSWFIWPMFSFQVYPGNLLNTYH-WRAIDADHV---------VVWRGWYSIG 292
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
DD+ + +D EDI L E VQRGL+S Y G + HS++H
Sbjct: 293 GYDDETVRRMAQQDRATTVEEDIHLVESVQRGLKSRGYVPGPLVVDPNCGVNSEHSVMH 351
>gi|422010170|ref|ZP_16357152.1| dioxygenase subunit alpha [Providencia rettgeri Dmel1]
gi|414092343|gb|EKT54022.1| dioxygenase subunit alpha [Providencia rettgeri Dmel1]
Length = 375
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 161/375 (42%), Gaps = 28/375 (7%)
Query: 18 VYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG 77
V N + I+ A T P+ +YT E ++F SW V + ++K+ + + +
Sbjct: 7 VISINDHLDIDNAWTIPARYYTSNDVFEYEKEKIFANSWVCVAHVSEVKEKNSYITRELI 66
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATR 135
V+ R + + F+NVC H L +G SGK K+ CPYH W + LDG L AT
Sbjct: 67 GESLVIVRGRDDVLRGFYNVCPHRGHQLISGESGKVKNVITCPYHAWAFKLDGQLAHATN 126
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEILS 193
+ +F L V F+ +NM G+ +E++ G + ++
Sbjct: 127 CENVNNFEADAMSLSSFHVIEHAGFIYVNMTVGEPQPIEEQLP---------GLAEKMQE 177
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ S L R NWK DNY++ YH P H AS + ++ Y L +
Sbjct: 178 ACAVISDLKLAARFVSHTPANWKTIVDNYIE-CYHCPTNHVSFASSVDVNVYEHQLLDNW 236
Query: 254 SIQRCESGSTEGTD--DTHRLGSKAIYAFIYPNFMINRY--GPWMDTNLVIPLAPTRCKV 309
++Q ++ +E + D L + +I+P+ M N G +M P+
Sbjct: 237 TVQIGKAKPSESSYQFDESVLDPRFFGFWIWPSTMFNMPPGGDFMTVIYEFPVNAGETLQ 296
Query: 310 VFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQ 367
+D YFL+ L + + + + + + ED+ L E VQ+GL S Y GR ++
Sbjct: 297 HYDIYFLNEELTEYQKNLVEWYRTV--FRPEDLRLVESVQKGLRSRGYRGQGRIMADRQR 354
Query: 368 T------MYHFHSLL 376
+ + HFH ++
Sbjct: 355 SGISEHGVAHFHKIV 369
>gi|406706484|ref|YP_006756837.1| Rieske-type iron-sulfur protein [alpha proteobacterium HIMB5]
gi|406652260|gb|AFS47660.1| Rieske-type iron-sulfur protein [alpha proteobacterium HIMB5]
Length = 397
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 33/384 (8%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N +PIE A P+ YT+ +L E ++F W V+G + +P D + +
Sbjct: 21 NVDMPIENANGLPNECYTNADYLYYEREKIFCNKWIVIGVASSIPNPGDARPYNLLGIPL 80
Query: 82 VVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
++ RD + I FHNVC H ++ K+ CPYH W+Y G L+ I G+
Sbjct: 81 ILVRDKDMDIKVFHNVCSHRGFKLVDNPCTLKNVIRCPYHSWSYDFKGNLIATPHIGGLN 140
Query: 141 DFNVKEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILS 193
+ ++F L ++ W + +N+ + ++ + A + ++ + L
Sbjct: 141 NHQSEKFDKNKSNLKEVKSKVWMDIIFVNINSNEIEFDDYIKPLEARWSSFINKDDQKLI 200
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY-------- 245
++ D L + CNWK +NY + YH+P H L ++ +
Sbjct: 201 VHSNDYGYFNL-----DVNCNWKFAIENYCE-SYHLPTIHPELNKVSNINDHYHIQGLPN 254
Query: 246 -----STSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVI 300
+ YE+ + + D T S+ Y ++PN MI + +
Sbjct: 255 RFAGQGSKKYEQPVKGNKKFDTFPNWDKTKLKNSE--YIALFPNVMIGLHIDHFYVYWLE 312
Query: 301 PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQ----VQMEDIILCEGVQRGLESPAY 356
PLA + + + G+ + +++ K++ + V +EDI EG+Q G SP Y
Sbjct: 313 PLAMNKTREHMQMYYVGNESANGEELKELRKENSRFWKDVMIEDIKAIEGMQEGRNSPVY 372
Query: 357 CSGRYAPSVEQTMYHFHSLLHCNL 380
G ++P ++Q + FH + NL
Sbjct: 373 NGGNFSPVMDQPTHQFHKWVATNL 396
>gi|291434912|ref|ZP_06574302.1| Rieske 2Fe-2S family protein [Streptomyces ghanaensis ATCC 14672]
gi|291337807|gb|EFE64763.1| Rieske 2Fe-2S family protein [Streptomyces ghanaensis ATCC 14672]
Length = 381
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 153/374 (40%), Gaps = 33/374 (8%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P+E+ T P YT P E+ R+F R W V T+++ P ++ + V+
Sbjct: 14 LPLERGQTLPPPAYTSPELYEREVERIFRREWLCVARTEEIPQPGNYLRLDVLGTPLVIT 73
Query: 85 RDDNGKIHAFHNVCRHHASIL-----ATGSGKKSWFVCPYHGWTYGLDGTL---LKATRI 136
RD+ G++HA VCRH L A G CPYH WTY L+G L +
Sbjct: 74 RDEQGELHALSRVCRHRFMDLLPPETAPEHGCLKRLTCPYHAWTYRLNGQYAGQLAGAPL 133
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
DF+ L V W FV+LN+ A VA E L G LS +G
Sbjct: 134 MQRVDFDRAGCRLPAHRVEVWNGFVMLNLDPGAA--------PVAPE-LHGLDLRLSSHG 184
Query: 197 IDSSLSYLCRREYTIECNWKVF----CDNYLDGGYHVPYAHKGL-ASGLQLDSYSTSLYE 251
I +S + + NWKV C+NY G H L A ++D +
Sbjct: 185 IADWVSVHTQTWEGVPANWKVAVENGCENYHHMGTHAATLEPVLSARDTEVDECDGRWFT 244
Query: 252 KVS-IQRCESGSTEGTDDTHRLGSKA----IYAFIYPNFMINRYGPWMDTNLVIPLAPTR 306
+ + R E G T G R G + A I+P F++ +P P
Sbjct: 245 MFTPLSRPERGGT-GLGRQARTGRGPQPGMLIAGIFPQFVLAVLPDSAVGIRWLPTGPAT 303
Query: 307 CKVVFDYFLDGSLKDDKAFIEQS---LKDSEQVQMEDIILCEGVQRGLES-PAYCSGRYA 362
+ + D +E+S ++Q ED++ GVQRGL S PA +GR++
Sbjct: 304 HDTRITVMVPPEVADTPGSVERSDGLRARIARIQEEDLVAVRGVQRGLASHPAPSNGRFS 363
Query: 363 PSVEQTMYHFHSLL 376
+E+ ++ F L
Sbjct: 364 -HLERPLWQFQRYL 376
>gi|418050043|ref|ZP_12688130.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mycobacterium rhodesiae
JS60]
gi|353190948|gb|EHB56458.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mycobacterium rhodesiae
JS60]
Length = 382
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 155/369 (42%), Gaps = 40/369 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P ++ P Y DP+ E H +F W VG+ L + G ++ R
Sbjct: 20 PFGQSRMLPREAYVDPAVFEWEKHNIF-SGWHCVGHASDLDGAGAQKAVGSGADGILLVR 78
Query: 86 DDNGKIHAFHNVCRH--HASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
++ K+ AF NVCRH H + + K+ VCPYH W+Y LDG L +A + F+
Sbjct: 79 GEDNKVRAFANVCRHRGHEMLACGATAKRRGIVCPYHSWSYKLDGQLRRAPTFDTAEGFD 138
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+FGL L + W ++ ++ + + D +V G +++S + L+
Sbjct: 139 AGQFGLAELRLVDWHGYLFVD---PSGRDSDFDLHVA------GMEDVISPYRPE-DLTV 188
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLA------SGLQLDSYSTSLYEKVS-IQ 256
+ R Y +E NWKV +NY + YH H L+ SG LD + + I
Sbjct: 189 VARHSYELETNWKVIVENYQE-CYHCSTIHPELSKISPPTSGENLDLPGDWIGGWMGMID 247
Query: 257 RCESGSTEGTDDTHRLGSKAI------------YAFIYPNFMINRYGPWMDTNLVIPLAP 304
E+ S G R G AI Y +PN +++ + ++ T++++PLA
Sbjct: 248 EAETMSLSG-----RSGGVAIKGLSEQELRTVMYLVGFPNLLVSLHPDYVMTHMMMPLAV 302
Query: 305 TRCKVVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
R V + D F D + +D CE VQRGL SP G AP
Sbjct: 303 DRTHVECAWAFPKEALDKPDFDPSYAVDFWDLTNRQDWAACESVQRGLSSPHARPGPLAP 362
Query: 364 SVEQTMYHF 372
E +Y F
Sbjct: 363 D-EDGVYQF 370
>gi|307726989|ref|YP_003910202.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307587514|gb|ADN60911.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 378
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 159/376 (42%), Gaps = 37/376 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P A P YT P FLALE +F WQ VG LK P D+ + +IG VV R
Sbjct: 20 PFSDAHAMPPGVYTSPEFLALEQRDIFDHEWQCVGRASALKAPGDYLTAQIGAQPVVVLR 79
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D+ ++ A NVC H S+L G G VCPYH W Y LDG L A + + F +
Sbjct: 80 DEQMQLKAMSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYSLDGALKGAPLMERQEGFCKE 139
Query: 146 EFGLVPLEVATWGP--FVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
++ L + W +V L+ + VH++ L S ++ G+ +
Sbjct: 140 KYELPAVRCEQWQGWIYVTLDRNAQPVHEQ-----------LAELSTLIDAYGMQDYIET 188
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGL-QLD---SYSTSLYEKVSIQ 256
E+ + NWK+ +N+++ YH+P H+ G S L ++D + Y ++ +
Sbjct: 189 FY-EEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMDCPPGRAAFNYHWITKE 246
Query: 257 RCESGSTEGTDDT----HRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF- 311
D+T H + A+ A +YP +I + ++ P R + F
Sbjct: 247 ASLPIGNAHPDNTRLSGHWRKTTALLA-VYPTHLITLTPGYFWYLVLQPQGVGRVHIRFG 305
Query: 312 -----DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
++ D A +++ L ++V ED E V RG+ +P G + +E
Sbjct: 306 GGLAPEFIADPQANAHMATLKKLL---DEVNAEDRRGVEAVFRGVHAPLAKPGHLS-HLE 361
Query: 367 QTMYHFHSLLHCNLTN 382
+ Y F L L +
Sbjct: 362 RPNYDFARYLASKLKS 377
>gi|254453648|ref|ZP_05067085.1| putative dioxygenase subunit alpha YeaW [Octadecabacter arcticus
238]
gi|198268054|gb|EDY92324.1| putative dioxygenase subunit alpha YeaW [Octadecabacter arcticus
238]
Length = 340
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 160/351 (45%), Gaps = 52/351 (14%)
Query: 56 WQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWF 115
W +VG+ ++ K+P F I E VV + +G IHA+HNVCRH + L K
Sbjct: 4 WHLVGHVNEFKEPGSFIVQDIFEQSVVVTNEKDGNIHAWHNVCRHRGNRLMNERRGKVGG 63
Query: 116 V--CPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQE 173
V CPYH W Y LDG L A R + +F+ +++ L + + + +V + + +
Sbjct: 64 VLRCPYHSWCYNLDGGLRAAPRTEHLDNFSKEDYSLRKVRMEIFAGWVFITLDE------ 117
Query: 174 EVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYA 232
D+ VA E G+ EI+ D + + + + NWKV +N ++ GYH +
Sbjct: 118 --DAQPVA-EMAAGAEEIMRKYMPDMDDVELVEETDVIVYANWKVIQENAVE-GYHFDLS 173
Query: 233 ---HKGLASGLQLDSYSTSLYEK----VSIQRCE---------SGSTEGTDDTHRLG--- 273
HK LA+ + Y+ + Y+K + E G+T TD +G
Sbjct: 174 GPVHKDLAALIDFKGYTLTAYDKYWTYIGPPNKEVTHAYGLPLEGATWQTDSFFNIGLWP 233
Query: 274 SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD---DKAFIEQSL 330
+ + Y+F Y + M+ + ++IPL P + + F Y+ + KA IE
Sbjct: 234 NTSFYSFPYTD-MVGVF-------IMIPLTPEKSLLRFSYYAPKGREMPEVTKAAIEWMN 285
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRY------APSVEQTMYHFHSL 375
KD + EDI+L E Q+GL S + SGRY E +++FH L
Sbjct: 286 KD---LGPEDIVLNETNQKGLHSIGFGSGRYLIDDSIPNQSEHLVFNFHKL 333
>gi|92113132|ref|YP_573060.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91796222|gb|ABE58361.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 445
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 15/239 (6%)
Query: 3 SSSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYT 62
++S + L AA+ + Q + +L P +Y DP ALE+ +F W VG T
Sbjct: 22 ATSALDDPLAAARDATADMLRQRQGDHSL--PQPFYNDPRVFALEMREIFEHEWLFVGMT 79
Query: 63 DQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHG 121
++ ++ + +IG+ +V R D G IHAFHNVCRH S L T GK + VCPYH
Sbjct: 80 CEIPAKGNYLTVQIGDNPIIVVRGDQGTIHAFHNVCRHRGSRLCTQAKGKVAKLVCPYHQ 139
Query: 122 WTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA 181
WTY LDG LL A + G +DF++ GL P+ V G F+ +++ D
Sbjct: 140 WTYELDGRLLFAGQDMG-EDFDLGAHGLKPVAVTHAGGFLFVSLA---------DQPPAI 189
Query: 182 NEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+++L + L+ +D ++ + NWK+ +N + YH AH L + L
Sbjct: 190 DDFLATLDDYLAPYEMD-NVKVAAESNIVEQANWKLVIENNRE-CYHCNGAHPELLNSL 246
>gi|307546042|ref|YP_003898521.1| Rieske (2Fe-2S) domain-containing protein [Halomonas elongata DSM
2581]
gi|307218066|emb|CBV43336.1| Rieske (2Fe-2S) domain protein [Halomonas elongata DSM 2581]
Length = 427
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 168/406 (41%), Gaps = 58/406 (14%)
Query: 11 LVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQD 70
L AA+ E Q + + P +Y D L++ +F + W G T +L +
Sbjct: 13 LAAARDATAEMLTQR--RRHFSLPQPFYNDERLFQLDIQEIFSKEWLFAGLTCELPSKGN 70
Query: 71 FFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGT 129
F + IG+ V+ R +NG+IHAFHNVCRH S L SGK + VCPYH WTY LDG
Sbjct: 71 FITLEIGDNPVVIVRGNNGEIHAFHNVCRHRGSRLCVKESGKVAKLVCPYHQWTYELDGR 130
Query: 130 LLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS 189
LL A G DF++ +GL P+ V T G ++ +++ ++ +E L
Sbjct: 131 LLFAGTDMG-SDFDLSAYGLKPVHVRTAGGYIFISLAEQP---------PAIDELLETME 180
Query: 190 EILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ-----LDS 244
L + +D ++ + NWK+ +N + YH AH L + LQ D
Sbjct: 181 NYLDLYDMD-NVKVAVESSIVEQANWKLVIENNRE-CYHCNGAHPELLNSLQEFDDSEDP 238
Query: 245 YSTSLYEKVSIQR--------------------------CESGSTEGTDDTHRLGSKAIY 278
+T Y+++ ++ G+ T D + K +
Sbjct: 239 RATPAYKELVARKQGEWQAMGVPWELKRLGRRNRLTRTPLLDGTVSMTMDGKQACKKLMG 298
Query: 279 AFIYPNFMI-------NRYGPWMDTNLVI----PLAPTRCKVVFDYFLDGSLKDDKAFIE 327
P+ + N + +M + V+ PL P + V + + + +
Sbjct: 299 RLPSPDLGVLRILHLPNSWNHFMGDHAVVFRVLPLGPQKTVVTTKWLVHKDAVEGVDYDP 358
Query: 328 QSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ ++ + +D L E QRG+ S AY G Y+ + E + F
Sbjct: 359 ERMRRVWDATNDQDRRLAEENQRGINSSAYEPGPYSETFEFGVIDF 404
>gi|425288675|ref|ZP_18679543.1| hypothetical protein EC3006_2152 [Escherichia coli 3006]
gi|408214843|gb|EKI39251.1| hypothetical protein EC3006_2152 [Escherichia coli 3006]
Length = 294
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A E+ + G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATSVED--------QLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q +
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFA 243
Query: 261 GSTEGTDDTHRLGSKAIYAF-IYPNFMIN 288
+E + A + F ++P M+N
Sbjct: 244 KPSEQSFKFEEGTDAAFHGFWLWPCTMLN 272
>gi|320592431|gb|EFX04861.1| rieske family domain containing protein [Grosmannia clavigera
kw1407]
Length = 411
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 151/352 (42%), Gaps = 26/352 (7%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
SSWY P+ LE VF + W ++ +T + D+ S + F + D G+I+ F
Sbjct: 24 SSWYRSPAMYELERRAVFSQRWLLMTHTLRFTKAGDYESFTVAGFSFFLVLDRTGRINGF 83
Query: 95 HNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HN+CRH A I+ G + C YHGW+Y G L KA R + F+ + GL+P+
Sbjct: 84 HNICRHRAYPIVEKACGNAAVLSCKYHGWSYSYQGGLAKAPRFDTVDGFDRAQHGLLPVH 143
Query: 154 V-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V FV +N+ + S ++++ G S + G S + R + ++
Sbjct: 144 VHVDRAGFVWVNL------EAGTPSVPWSDDFAGVDSTMADTYGF-SGYHFDHRWDIDLD 196
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS----TSLYEKVSIQRCESGSTEGTDD 268
NWK +NY + YH P +H +A L Y+ ++ + + ES D
Sbjct: 197 ANWKGVVENY-NECYHCPTSHPLIAGVSDLTKYTVEPKAGAFQHTIVNKAES------DG 249
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
R ++I ++YP I + ++P + T ++ D F D A +
Sbjct: 250 NFR---RSI-VYLYPLTSITVTDNFFYIQRMVPTSATTTRIENDVFRHEKATD--AEFQA 303
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
L QV ED LC+ Q + + Y +G + P E+ +F + +
Sbjct: 304 ILDFYHQVLGEDKTLCDNAQANINAGVYVNGEFHPQKEKGPLYFQDTVRTQV 355
>gi|404419983|ref|ZP_11001732.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium fortuitum
subsp. fortuitum DSM 46621]
gi|403660550|gb|EJZ15113.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium fortuitum
subsp. fortuitum DSM 46621]
Length = 443
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P + P+ Y P+F LE+ R++ R+WQ D + +P D+F R G ++ R
Sbjct: 18 PPARPTLVPADRYISPAFAQLEMERMWPRAWQQACTVDHVAEPGDYFEYRCGPYSVLIVR 77
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D+G++ AF N CRH + L TG+G C YHGWT+ L GTL + G ++
Sbjct: 78 GDDGQLRAFQNACRHRGNALCTGAGSSLRELKCGYHGWTWDLAGTLKRIPNRKGFGTVHM 137
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVAN-EWLG-GSSEILSINGIDSSLS 202
EF L P+ V TW V +N+ +A+ + V A+ W G G + ID
Sbjct: 138 SEFPLAPVLVDTWERLVFVNLDPDAMPLADYLEAVPADIAWCGLGDFRCYATMTID---- 193
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+E NWK D Y + YHV H L
Sbjct: 194 --------VEANWKTIADGYSE-TYHVQTLHPEL 218
>gi|377807620|ref|YP_004978812.1| [2Fe-2S] protein [Burkholderia sp. YI23]
gi|357938817|gb|AET92374.1| [2Fe-2S] protein [Burkholderia sp. YI23]
Length = 383
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 150/349 (42%), Gaps = 29/349 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ +A + P S+YT E +F + W G D+L P + + ++ RD
Sbjct: 19 LGQARSMPGSFYTSRDVFEAEREHIFLKHWFFAGRADELSKPGSYRAIDTAGGPVLLTRD 78
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+NG++HAF N CRH + L G G K VCPYH W+Y LDG+LL+A + F+
Sbjct: 79 ENGELHAFANTCRHRGAQLLEGCGAKRSIVCPYHAWSYRLDGSLLRAPGTQDVPGFDAAA 138
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
GL+P+ ++ W + LN EA +++ ++ LG E+ + + ++ + + R
Sbjct: 139 EGLIPVRMSDWKGNLFLNFDNEA---DDLATH------LGTYPELFASHRVE-DMRCVFR 188
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAH-KGLASGLQLDSYSTSLYEKVSIQRCESGST-- 263
+ CNWK+ +N ++ YH H + + + + L + + +Q S +
Sbjct: 189 VDLPAACNWKMLLENAME-TYHTGLVHARTVGAQISLTFPGGPNWHAIQVQSDVSTAVLD 247
Query: 264 ----------EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
EG D R G+ + I P + M V P+A R +
Sbjct: 248 KSAPPPFPQIEGLSDIARKGT--FFTLIEPLTQLVFAQDCMWWLAVHPVAADRSVLSVGG 305
Query: 314 FLDGS---LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ + D A + E V ED+ + E QRG+ S Y G
Sbjct: 306 CFPRAYTEMPDFDARARPYFERWEAVAREDVAILERQQRGVSSVLYRPG 354
>gi|55376914|ref|YP_134765.1| putative dioxygenase alpha subunit YeaW [Haloarcula marismortui
ATCC 43049]
gi|55229639|gb|AAV45059.1| putative dioxygenase alpha subunit YeaW [Haloarcula marismortui
ATCC 43049]
Length = 379
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 45/367 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++T LE ++F R W G+ + + +P +F+ IG+ + ++ R + +I A
Sbjct: 26 PAKYFTSSEIHELEKEKIFGRYWVYAGHANAITEPGAYFTRTIGDRQVIIVRGHDDEIRA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL---------------LKA 133
F NVC H S + T CPYH W+Y LDG L L
Sbjct: 86 FFNVCAHRGSKMVEDTPMTDPENMGRIRCPYHMWSYDLDGDLESTPQSFEEAGLNPDLSD 145
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
+ G+ + E L +E GPFV LN ++ + E L E +
Sbjct: 146 DEVCGM---DASENSLSEVETDRIGPFVFLNFAQDPMPLAEQAGT------LKSELEAMP 196
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ + + Y+ +ECNWK F NY + H H+ + ++L + +
Sbjct: 197 LGEYEHAARYVSE----VECNWKTFAGNYSECD-HCHANHQDWITDIELAESELEVNDYH 251
Query: 254 SIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTRCKV 309
I E +D R+ +A + + +PNF +N YG T ++ P+ R ++
Sbjct: 252 WI--LHYTHDEDVEDEMRIHDEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEGRFQL 309
Query: 310 VFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
+ D YF D + D + ++ ++ S Q+Q ED L E GL+S A + P+ E T
Sbjct: 310 IADYYFSDEEMTDAE---QEFVQTSRQLQEEDFELVERQYEGLKSGALAQAQLGPN-EHT 365
Query: 369 MYHFHSL 375
++ H L
Sbjct: 366 VHRLHRL 372
>gi|302555884|ref|ZP_07308226.1| dioxygenase [Streptomyces viridochromogenes DSM 40736]
gi|302473502|gb|EFL36595.1| dioxygenase [Streptomyces viridochromogenes DSM 40736]
Length = 388
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 153/371 (41%), Gaps = 21/371 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P S YTDP A E +F W + L F + ++G +V
Sbjct: 18 LPESLITTLPGSSYTDPEIFAQEQEHIFEAMWFCAVRSADLARSGVFRTVQVGRESILVT 77
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGK--KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + + AF NVCRH + L T K F CPYH WTY L G L+ A +T + D
Sbjct: 78 RARDNSVRAFFNVCRHRGAKLCTAEAGEVKRAFQCPYHAWTYDLTGKLVAAPNLTKMPDV 137
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
E+GL + W +V + + + +EV +VVA S E I +D
Sbjct: 138 GRTEYGLAAVATHEWLGYVWVCLAENPPPFDEVVRDVVARLGDTKSIERYGIEDLD---- 193
Query: 203 YLCRR-EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ--- 256
L RR Y ++ NWK+ +N+++ YH H L L D Y+ Y +
Sbjct: 194 -LGRRIVYDVKANWKLIVENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGS 251
Query: 257 RCESGSTEGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ + +G++ R+ + YA + P +N + + + P+A R V
Sbjct: 252 EVKGFTVDGSEGLDRIPGVTEDQDRRYYAITVRPQVFVNLVPDHVVFHRMYPVAADRTIV 311
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ + + + +S++ ++V +D CE Q + S Y G E +
Sbjct: 312 ECDWLFHKHVVESGKDVSRSVELFDRVNRQDFDACERCQPAMSSRLYAKGGVLVPSEHHI 371
Query: 370 YHFHSLLHCNL 380
FH+ + L
Sbjct: 372 GAFHAFVQERL 382
>gi|119386177|ref|YP_917232.1| Rieske (2Fe-2S) domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119376772|gb|ABL71536.1| Rieske (2Fe-2S) domain protein [Paracoccus denitrificans PD1222]
Length = 384
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E A P YT+P FL+ E+ +F + W VG + +L D+ + + VV R
Sbjct: 17 PLEDARAMPPGVYTNPEFLSHEIETIFSKEWICVGRSSRLAKTGDYLTYDLAGQPVVVLR 76
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G++ AF NVC H S L G G K VCPYH WTY LDG L A +T F +
Sbjct: 77 GKDGQLRAFSNVCLHRMSTLVEGCGNKRVLVCPYHAWTYDLDGRLRGAPFMTQTTGFCKE 136
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ L P+ W ++ + + K D VA LG ++++ +++ + C
Sbjct: 137 NYALPPIRCEEWLGWIYITLDK--------DRPGVAAA-LGPLEKLIAPYEMENYVE--C 185
Query: 206 RREYTI-ECNWKVFCDNYLDGGYHVPYAHKGLASG 239
RE + + NWKV +N+++ YH+P H G
Sbjct: 186 FRETHVWDTNWKVLAENFME-SYHLPVCHAATVGG 219
>gi|402220671|gb|EJU00742.1| ISP domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 452
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 148/348 (42%), Gaps = 33/348 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
+ T P+SWY LE ++ SW + +T P D+ + + +G
Sbjct: 64 STTLPASWYRSDKLCELEKRAIYSNSWFMTTHTAAFTKPGDYRVFDLAGQSIFLVMGHDG 123
Query: 90 KIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
+I FHNVCRH A L T +G S C YH WT+ L+G L++A + + +FN +
Sbjct: 124 EIRGFHNVCRHRAYPLRTQPAGCSSVISCGYHAWTWNLEGGLIRAPQFKDVPNFNKSDQS 183
Query: 149 LVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWL-----GGSSEILSINGIDSSLS 202
L + V T G + +N+ V E L ++L + + S LS
Sbjct: 184 LWSVHVHITRGGCIFVNLEASEVPSMSFQQFFPGLEELLDDVDFARFKLLVLYPLRSPLS 243
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS----TSLYEKVSIQRC 258
R + EC YH AH LA +++YS + + V+I
Sbjct: 244 LTTRIDGFQEC-------------YHCQVAHPSLAKSFDINNYSLMNHPTYTQHVAIPSS 290
Query: 259 ESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGS 318
+ G S A++ ++YP+ IN + T+ P+ C+V +Y++D S
Sbjct: 291 NAKDAYG-------NSNALFLYLYPSSAINCFETGWQTSFTSPIDARTCRVSMEYWVDKS 343
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
L + + E +K QV ED LCE VQ+ +++ Y G P+ E
Sbjct: 344 LSEQEK--EDFVKSFYQVFKEDCDLCEKVQKNVDAGVYSKGVLHPTHE 389
>gi|448642650|ref|ZP_21678609.1| putative dioxygenase alpha subunit YeaW [Haloarcula sinaiiensis
ATCC 33800]
gi|445759450|gb|EMA10728.1| putative dioxygenase alpha subunit YeaW [Haloarcula sinaiiensis
ATCC 33800]
Length = 379
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 45/367 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++T LE ++F R W G+ + + +P +F+ IG+ + ++ R + +I A
Sbjct: 26 PAKYFTSSEIHELEKEKIFGRYWVYAGHANAITEPGAYFTRTIGDRQVIIVRGHDDEIRA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL---------------LKA 133
F NVC H S + T CPYH W+Y LDG L L
Sbjct: 86 FFNVCAHRGSKMVEDTPMTDPENMGRIRCPYHMWSYDLDGDLESTPQSFEEAGLNPDLSD 145
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
+ G+ + E L +E GPFV LN ++ + E L E +
Sbjct: 146 DEVCGM---DASENSLSEVETDRIGPFVFLNFAQDPMPLAEQAGT------LKSELEAMP 196
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ + + Y+ +ECNWK F NY + H H+ + ++L + +
Sbjct: 197 LGEYEHAARYVSE----VECNWKTFAGNYSECD-HCHANHQDWITDIELAESELEVNDYH 251
Query: 254 SIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTRCKV 309
I E +D R+ +A + + +PNF +N YG T ++ P+ R ++
Sbjct: 252 WI--LHYTHDEDVEDEMRIHDEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEGRFQL 309
Query: 310 VFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
+ D YF D + D + ++ ++ S Q+Q ED L E GL+S A + P+ E T
Sbjct: 310 IADYYFSDEEMTDAE---QEFVQTSRQLQEEDFELVERQYEGLKSGALAQAQLGPN-EHT 365
Query: 369 MYHFHSL 375
++ H L
Sbjct: 366 VHRLHRL 372
>gi|399154205|ref|ZP_10754272.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [gamma
proteobacterium SCGC AAA007-O20]
Length = 370
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 162/359 (45%), Gaps = 38/359 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y D F +E VF ++W VG+ +LK P D + + ++ ++ G+I+A
Sbjct: 23 PAVAYNDFEFWEIESETVFTQNWVFVGFVHELKKPGDVVTCSVAGQPLILIKNKLGEINA 82
Query: 94 FHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG----IKDFNVKE 146
FHN CRH L A G K CPYH WTY LDG L + G ++ F +
Sbjct: 83 FHNACRHRCLKLVDKAKNVGTK--LRCPYHSWTYNLDGELCETPFFAGEEHHVEGFEFSK 140
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
GL P+ +A W ++ +N+ +A+ EE + ++ ++ + +D
Sbjct: 141 HGLKPVRLAIWHDWIFVNLSADALAFEEYSAPLMKYFEDINFEQVEPVATLDFG------ 194
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
I NWK +N+++ YHV + H+ + D ++ + C + E
Sbjct: 195 ---EISTNWKFLMENFIE-PYHVQFVHRTTTNQPLKDHHT------IVDDVCLGSAVELD 244
Query: 267 DDTHRLGSKAI---YAFIYPNFMINRYGP-WMDTNLVIPL--APTRCKVVFDYFLDGSL- 319
+ GS ++ Y ++PNF+I RY P + L +P+ T K V Y +G
Sbjct: 245 EKDKVKGSLSVSSRYLTLFPNFIIGRYFPDQIGVYLNVPVDSGLTHQKRVI-YTTEGQTL 303
Query: 320 -KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESP-AYCSGRYAPSVEQTMYHFHSLL 376
KD+ +++ D V ED +CE +Q G SP A G +P E ++ F +++
Sbjct: 304 SKDEVDAVKKLWWD---VHKEDHAICERMQLGRASPVAKEGGLLSPYWEDSVRAFQTMI 359
>gi|126735920|ref|ZP_01751664.1| Rieske (2Fe-2S) protein [Roseobacter sp. CCS2]
gi|126714477|gb|EBA11344.1| Rieske (2Fe-2S) protein [Roseobacter sp. CCS2]
Length = 387
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 162/379 (42%), Gaps = 37/379 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PIE A P++ Y P A+E V +W + + +P D + ++ R
Sbjct: 19 PIETANGLPNAHYISPDVFAVEKQAVLCANWAGLAVAADVPEPGDAKPIEFLGMPLLLVR 78
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
D G++ F N+CRH IL + K + CPYH W Y DG L+ + G
Sbjct: 79 DRQGRVRVFQNICRHRGMILVSEPKKIEGAIRCPYHSWCYSTDGKLVSTPHVGGPGHNTH 138
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+ GL+ + W V +N+ A EEV ++++A W + + G DS
Sbjct: 139 DAIDKSLLGLIEVRSHIWFDTVFINIDGNADPFEEVHADLIA-RW-SDFDQPMYHGGADS 196
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQ-- 256
+ ++ NWK+ +NY + YH+P+ H GL S +L D Y+ K S Q
Sbjct: 197 TFVL------PVKTNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYNIDEKGKFSGQGT 249
Query: 257 ------RCESGST--EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP---- 304
+ + G+ + D + Y +YPN ++ G D VI L P
Sbjct: 250 YVYRQLKGDDGAVFPDFADLDDKWAEGGEYITVYPNVLV---GVQRDHAFVIVLEPVSFE 306
Query: 305 -TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
TR + Y + + D A ++ + ED+ + EG+Q+G +P + GR++P
Sbjct: 307 ETREHIHLYY---ATPQTDDALRAKNTVQWRGIFEEDLFVVEGMQKGRYAPGFDGGRFSP 363
Query: 364 SVEQTMYHFHSLLHCNLTN 382
+++ + FH + + +
Sbjct: 364 AMDGPTHCFHDWVAGKIAD 382
>gi|297198001|ref|ZP_06915398.1| dioxyenase [Streptomyces sviceus ATCC 29083]
gi|197714996|gb|EDY59030.1| dioxyenase [Streptomyces sviceus ATCC 29083]
Length = 389
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 153/370 (41%), Gaps = 19/370 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P + YTDP A E +F W +L P F + ++G ++
Sbjct: 20 LPDSLIATLPGASYTDPGIFAQEQEHIFEAMWFCAVRASELPKPGAFRTVQVGRESILIT 79
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R + + A+ NVCRH + L T SG+ K F CPYH WTY L G L+ A +T + D
Sbjct: 80 RARDNSVRAYFNVCRHRGARLCTQESGEVKRAFQCPYHAWTYDLTGKLVAAPNLTKMPDV 139
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
E+GL + V W +V + + + +EV VV G +E + ID +L
Sbjct: 140 GRTEYGLASVAVREWLGYVWVCLAENPPPFDEVVQEVVTRL---GDTESIEHYDID-NLQ 195
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYE------KVS 254
R Y ++ NWK+ +N+++ YH H L L D Y+ Y
Sbjct: 196 VGRRITYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGED 254
Query: 255 IQRCESGSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
IQ +EG D + + YA + P +N + + + P+A R V
Sbjct: 255 IQGFTVDGSEGLDRIPGVSEDQDRRYYAITVRPQVFVNLVPDHVIFHRMYPVAADRTVVE 314
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
D+ + + +S++ ++V +D CE Q + S Y G E +
Sbjct: 315 CDWLYLPDVVQSGKDVSRSVELFDRVNRQDFDACERTQPAMSSRLYAKGGVLVPSEHHIG 374
Query: 371 HFHSLLHCNL 380
FH + L
Sbjct: 375 AFHDWVQARL 384
>gi|154252400|ref|YP_001413224.1| Rieske (2Fe-2S) domain-containing protein [Parvibaculum
lavamentivorans DS-1]
gi|154156350|gb|ABS63567.1| Rieske (2Fe-2S) domain protein [Parvibaculum lavamentivorans DS-1]
Length = 376
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 151/380 (39%), Gaps = 45/380 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A PS +YT E R+F R+W VG+ ++ P D F + ++ R
Sbjct: 18 PLADARLLPSRFYTSTEIFEAEKERIFRRNWVSVGHVAEIPKPGDRFRIDVAGEPLLIVR 77
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G + A VCRH A +LA G+G CPYH WTY LDG L+ A + G +
Sbjct: 78 GRDGVVRALSAVCRHRAMLLAEGAGNAGTISCPYHKWTYALDGALMAAPLMEGASPLDEA 137
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
L W F+ +N+ A + E L+ +D L +
Sbjct: 138 ACALPSFACEVWNGFIFVNLDGRAAPLAAALAP---------LGEELAPWKMD-ELEIVG 187
Query: 206 RREYTIECNWKVFCDNYLDGGYHV-----------PYAH------KGLASGLQLDSYSTS 248
R + NWKV DN+++ +H P A +G + L++
Sbjct: 188 RVVFDQRYNWKVLADNFMEAYHHFAIHPETFEPNYPAAMSQADEARGPFAALRMPHKGNE 247
Query: 249 LYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDT----NLVIPLAP 304
L E + D R G IYP+ ++ + +DT + I A
Sbjct: 248 LSEPL------FPPLPDIPDEARRGFSVFN--IYPSMLLAVF---VDTVTWYRMEIESAG 296
Query: 305 TRCKVVFDYFLDGSL--KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
+ ++ + SL D +A E + + V +EDI CEGVQ+GLES GR +
Sbjct: 297 SFRLTIYLFAHPRSLDVPDAEALKEFLREAATAVHIEDIAACEGVQKGLESRMAVPGRLS 356
Query: 363 PSVEQTMYHFHSLLHCNLTN 382
P +E ++ L L
Sbjct: 357 P-LEAAIHQHQQWLMGELVK 375
>gi|167041466|gb|ABZ06217.1| putative Rieske [2Fe-2S] domain protein [uncultured marine
microorganism HF4000_007D16]
Length = 370
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 152/358 (42%), Gaps = 35/358 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ +YTD F +E + V W +G+ + D I ++ +++ KI A
Sbjct: 12 PAKYYTDQQFWEIECNTVLADGWLFIGFVHEFLKSGDVIPISIAGRPILLIKNNKNKITA 71
Query: 94 FHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI-----KDFNVKEF 147
FHNVC H L + CPYH W+Y LDG L + G K FN +
Sbjct: 72 FHNVCSHRCLKLVNEKKNVGKIIRCPYHSWSYDLDGKLKASPHFGGTNQHSPKGFNHSDH 131
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GL P+ + W ++ +N+ +A EE ++ +I ++ +D
Sbjct: 132 GLKPIRIHIWYDWIFINLNGKAKKFEEYAKPLIKKFKGVNLKKIKNVATLDFG------- 184
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTS----LYEKVSIQRCESGST 263
I NWK +N+++ YHV + H D Y+ L V ++
Sbjct: 185 --KINSNWKFLIENFIE-PYHVQFVHSATTKQPLKDHYTIVDGICLGSGVDVK------- 234
Query: 264 EGTDDTHRLGSKAIYAFIYPNFMINRYGP-WMDTNLVIPLAP---TRCKVVFDYFLDGSL 319
E D++ L + Y ++PNF+I Y P + L +P+ P T+ +++ Y +G
Sbjct: 235 EENKDSNTLSVSSRYLSLFPNFIIGSYFPNQIGVYLNVPINPGLTTQKRII--YITEGKT 292
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPSVEQTMYHFHSLL 376
K I+ K V ED +CE +Q G SPA G +P E+++ FH L+
Sbjct: 293 M-SKQEIDLQKKIWWSVHKEDHEICERLQEGRSSPASDKGGLLSPYWEKSVQAFHKLV 349
>gi|400603117|gb|EJP70715.1| iron-sulfur cluster-binding protein [Beauveria bassiana ARSEF 2860]
Length = 367
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 150/344 (43%), Gaps = 31/344 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WY P+ LE +F + W +V + + D + F + RD G I A
Sbjct: 26 PAAWYRSPAMYELERRAIFSKKWLLVTHKLRFPDTGSYVQITEAGYTFFLIRDRQGNIRA 85
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL--V 150
HN+CRH A ++ SGK S C YHGW+YG DG L KA + + F ++ GL +
Sbjct: 86 HHNICRHRAYPMVDKESGKVSVLACKYHGWSYGFDGHLAKAPKYQEVAGFKKEDNGLYRI 145
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW---LGGSSEILSINGID-SSLSYLCR 206
+ V G FV +N+ V A W E + D + +Y
Sbjct: 146 HVHVDALG-FVYVNLDA---------GEVPAVSWGQDFATVDEQPRLRKFDMTRYTYDHS 195
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT 266
E T + NWKV DNY + YH P H L + L Y + + + + + + T
Sbjct: 196 WEMTGDYNWKVLADNY-NECYHCPTGHPALPALTDLAKY----WVETAGAHIQHYAVDKT 250
Query: 267 D-DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF--LDGSLKDDK 323
D + LG+ + F YPN + +P++ T+ + ++ + +D + +
Sbjct: 251 DPEVKSLGN--VSTFYYPNASSTVTPHFFFIQRCVPVSATQTHMEYEVYRSIDAT---ES 305
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
F+E S + + MED LC G QR L + + +G P E+
Sbjct: 306 EFVEIS-DFFKNIMMEDKELCNGAQRNLNAGIFLNGELHPRAEK 348
>gi|312195151|ref|YP_004015212.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311226487|gb|ADP79342.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 377
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 148/357 (41%), Gaps = 20/357 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P + YT A E R+F R W + L +P F + +G ++ R +G +
Sbjct: 18 TLPGAAYTSAEVFAREQERIFERVWTCAVHGSDLAEPGQFRTVPVGRESVLITRALDGAV 77
Query: 92 HAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
HAF NVCRH + L A G +++ CPYH WTY LDG+L+ A + D + +G
Sbjct: 78 HAFLNVCRHRGARLCVEAAGRTRRT-LRCPYHAWTYSLDGSLVAAPNLADAPDVDRSAYG 136
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + V W +V + EE A E LG + I + L R
Sbjct: 137 LHRVHVREWLGYVWVCPAASPPSFEETVIG-AATERLGDPAAIERYQ--VAGLRVGRRVS 193
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQ---RCESGST 263
Y + NWK+ +N+L+ YH P H L L Y+ Y + +
Sbjct: 194 YDVAANWKLLVENFLE-CYHCPAIHPELVRVLPEFARGYAAQYYVGHGAEFGPDVAGFTV 252
Query: 264 EGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
+G+ RL A YA I P +N + + + P+A R V D+
Sbjct: 253 DGSPGVERLPGLAPAQERRYYAITIRPQVFVNLVPDHVILHRMFPVAADRTLVECDWLYL 312
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
++ + +++S++ ++V +D CE Q + S AY G E + FH
Sbjct: 313 PAVVEAGTDLDRSVELFDRVNRQDFAACERCQPAMASRAYARGGVLVPSEHHLGAFH 369
>gi|402826405|ref|ZP_10875604.1| rieske (2fe-2S) iron-sulfur domain protein [Sphingomonas sp. LH128]
gi|402260040|gb|EJU10204.1| rieske (2fe-2S) iron-sulfur domain protein [Sphingomonas sp. LH128]
Length = 397
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 152/358 (42%), Gaps = 34/358 (9%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+E A+T P S YT F E ++Y WQ VG D + P D+F+ R +V R
Sbjct: 21 LEDAVTLPPSCYTSQDFYEFEKDALYYAEWQCVGREDWIPKPGDYFTTRTINEPIIVSRT 80
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G++ A VC+H A ++A GSG F+CPYH W+Y LDGTL+ A + +F+ K
Sbjct: 81 LEGQVRAMSAVCQHRAMLVAEGSGNARGFLCPYHHWSYSLDGTLVAAPAMNKTCNFDRKA 140
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L V W FV +N + A L G +E ++ + S+
Sbjct: 141 NSLPRFAVEIWNGFVFINFDENAAPLAPR---------LIGVAEAIAGYDLASAEGPKPD 191
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKG-----LASGLQ-----------LDSYSTSLY 250
+ NWKV +N D GYH H G + SG ++ +L+
Sbjct: 192 EGARLPWNWKVMFENNND-GYHASRLHAGPLHDFVPSGKAEFPHSEPEDAGFLRFNGTLH 250
Query: 251 EKVSI---QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
S QR G D R ++ +A + P+ + + ++ P P
Sbjct: 251 PDASFNATQRAVLPIFPGLSDEMR--NRMTFANVPPSLSLIMMSDMVIYLILRPDGPESL 308
Query: 308 KVVFD-YFLDGSLKDD--KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
++ F G++KD ++ +++ + + +D + E VQ+GL S GRY+
Sbjct: 309 EMDTGLLFAPGAMKDPTFDHKLDMNMRATAHIIAQDFHVDELVQKGLRSRFAPRGRYS 366
>gi|333918637|ref|YP_004492218.1| Dioxygenase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480858|gb|AEF39418.1| Dioxygenase [Amycolicicoccus subflavus DQS3-9A1]
Length = 390
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 24/360 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P S Y+D A E +F + W + + P F + ++G +V R G+
Sbjct: 28 TLPGSAYSDSEMFAREQALIFEQLWFCAVRSADIARPGAFKTVQVGRESILVTRSRKGEA 87
Query: 92 HAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF N+CRH + L T G K+S F CPYH WTY +G L+ A +T + D + E+G
Sbjct: 88 RAFFNICRHRGAKLCTAESGEAKRS-FQCPYHAWTYDFEGKLIAAPNLTSMPDIDRTEYG 146
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + V W ++ + + EA ++ N V G +E L G++ +L R
Sbjct: 147 LRKVHVREWLGYIWVCLAAEAPSFDDTVINDVRTRL--GDAESLEHYGVE-NLELGKRIT 203
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI-------QRCESG 261
Y ++ NWK+ +N+++ YH H L L ++ L + + + +
Sbjct: 204 YDVKANWKLIIENFME-CYHCATIHPELTE--VLPEFADGLAAQFFVGHGALFGEEVKGF 260
Query: 262 STEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+ +G++ R+ + + YA + P IN + + + PLAP V D+
Sbjct: 261 TVDGSEGLDRIPNVTEEQDRRYYAVTVRPQVFINLVPDHVIIHRMFPLAPDHTIVECDWL 320
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ + + +S++ +V +D CE Q +S Y G E + FH+
Sbjct: 321 YLPEVVESGKDLTKSVELFHRVNQQDFEACERCQAATDSRVYADGGVLVPSEHHIAEFHN 380
>gi|83951931|ref|ZP_00960663.1| Rieske 2Fe-2S family protein [Roseovarius nubinhibens ISM]
gi|83836937|gb|EAP76234.1| Rieske 2Fe-2S family protein [Roseovarius nubinhibens ISM]
Length = 385
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 33/373 (8%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N + + +A P++ Y DP+ E V + +W + + +P D +
Sbjct: 9 NVRTDVARANGLPNAHYIDPAVYEEEKQSVLFATWSGLAVAADVPEPGDAVPMEFMGMPL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI- 139
++ RD +G++ F N+CRH IL K + CPYH W Y G L+ + G
Sbjct: 69 LLLRDRDGQVRVFQNICRHRGMILVEEPRKIEGAIRCPYHSWCYSTKGKLVSTPHVGGPG 128
Query: 140 ----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ + GL + W V +N+ +A E+ ++V+ E L
Sbjct: 129 HNTHQAIDRDTLGLNEVRSHIWRDVVWINVSGDAPAFEDAMAHVI--ERWKEFDLPLYHG 186
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL---------DSYS 246
G DS + I+ NWK+ +NY + YH+P+ H GL S +L D YS
Sbjct: 187 GADSRFT------LEIKTNWKLAVENYCE-SYHLPWVHPGLNSYSRLEDHYNIEEPDQYS 239
Query: 247 ---TSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
T +Y +++ +R + + D + +A Y +YPN ++ G D I L
Sbjct: 240 GQGTLVYRQLTNERGQK-FPDFADVGAKWNEQAEYIAVYPNVLL---GVHRDHAFAIVLE 295
Query: 304 PTRCKVVFD--YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
P + + + + + D+ Q+ K +QV EDI + EG+Q+G Y GR+
Sbjct: 296 PKGPEATVEHIHLYYATPETDEELRAQNTKLWKQVFEEDIFVVEGMQKGRHVQGYDGGRF 355
Query: 362 APSVEQTMYHFHS 374
+P ++ + FH+
Sbjct: 356 SPVMDSPTHMFHA 368
>gi|358458411|ref|ZP_09168621.1| Choline monooxygenase [Frankia sp. CN3]
gi|357078341|gb|EHI87790.1| Choline monooxygenase [Frankia sp. CN3]
Length = 371
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 148/364 (40%), Gaps = 20/364 (5%)
Query: 26 PIEKALTP--PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
P +L P P + YT A E R+F R W + ++ +P F + IG ++
Sbjct: 4 PAGPSLLPTLPGAAYTSAEVFAQEQERIFERLWNCAVHGSEIAEPGQFRTVPIGRESVLI 63
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSW--FVCPYHGWTYGLDGTLLKATRITGIKD 141
R +G +HAF NVCRH + L T ++ CPYH WTY LDG+L+ + + D
Sbjct: 64 TRALDGSVHAFLNVCRHRGARLCTEPAGRTRRTLRCPYHAWTYALDGSLVAVPHLKDLSD 123
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
+ GL L+V W +V + + E+ A E LG + I + L
Sbjct: 124 VDRSAHGLHRLQVREWLGYVWVCLDASPPSFEDTVVG-AATERLGDPAAIERYH--VEGL 180
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLY--------- 250
R Y + NWK+ +N+L+ YH H L L Y+ Y
Sbjct: 181 RVGRRISYDVRANWKLLVENFLE-CYHCAAIHPELVQVLPEFALGYAAQYYVGHGAEFGP 239
Query: 251 EKVSIQRCESGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
E S E + + YA + P +N + + + P+A R V
Sbjct: 240 EVTGFTVDGSAGVERLPGLEQAQDRRYYAITVRPQVFVNLVPDHVILHRMFPVAADRTLV 299
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ ++ D I++S++ ++V +D CE Q + S AY +G E +
Sbjct: 300 ECDWLYLPAVVDGGTDIDRSVELFDRVNRQDFDACERCQPAMASRAYAAGGVLVPSEHHI 359
Query: 370 YHFH 373
FH
Sbjct: 360 REFH 363
>gi|357025291|ref|ZP_09087420.1| putative dioxygenase [Mesorhizobium amorphae CCNWGS0123]
gi|355542844|gb|EHH11991.1| putative dioxygenase [Mesorhizobium amorphae CCNWGS0123]
Length = 270
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 116 VCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEV 175
+CPYH WTY LDG L++A +++F+ KE L ++V + F+ +N+ A +
Sbjct: 1 MCPYHAWTYRLDGQLVRAPHTETLENFSTKEICLDQVQVEEFCGFIYVNLDPSAPSLKSQ 60
Query: 176 DSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKG 235
++ +EI L++ R Y I+ NWK DN+L+ YH P AHK
Sbjct: 61 TGDL--------ETEIRHWAPDIDKLTFAHRLTYDIKSNWKNIVDNFLEC-YHCPTAHKD 111
Query: 236 LASGLQLDSYSTSLYEKVSIQRCESGSTEGT--DDTHRLGSKAIYAFIYPNFMINRYGPW 293
S + +D+Y + + S ++G + T D ++ +++PN + RY P
Sbjct: 112 FCSLVDMDTYKVTTHGIYSSHMADAGKSANTAYDVSNATVRTHAVWWLWPNTCLMRY-PG 170
Query: 294 MDTNLV---IPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQV-QMEDIILCEGVQR 349
+ +V IP P R +D+FL+ K+ A Q+++ ++V Q EDI L E VQ+
Sbjct: 171 RSSMIVLSIIPAGPDRTFETYDFFLES--KEPDATELQTIRYLDEVLQTEDIGLVESVQK 228
Query: 350 GLESPAYCSGRY------APSVEQTMYHFHSLL 376
G+ +PA+ GR + E ++HFH L+
Sbjct: 229 GMNTPAFTQGRIVNDPNGSGQSEHALHHFHGLV 261
>gi|377807886|ref|YP_004979078.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. YI23]
gi|357939083|gb|AET92640.1| Rieske 2Fe-2S domain protein [Burkholderia sp. YI23]
Length = 383
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 33/358 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P ++Y+ F LE RVF R+W VG+ ++ D+F+ + ++ RD G++H
Sbjct: 38 PGAFYSSAHFAELERRRVFRRTWVCVGHVGEIPGNGDYFTTELTGEPLLIQRDAQGEVHV 97
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
NVCRH +++A G G VC YH W+Y LDG L +A + KD + L +
Sbjct: 98 LANVCRHRGNLVALGRGNARVHVCAYHAWSYELDGKLKRAPLMQECKDLDTSRCALPKIH 157
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
W F+ +N+ A E + A+ I + + + L + +E
Sbjct: 158 STIWQNFIFVNIDGNAAPLGEALRPLEAH--------IRNYHNEERELYHF--QEEVWHT 207
Query: 214 NWKVFCDNYLDGGYHVPYAHKGL---ASGLQLDSYS---------TSLYEKVSIQRCESG 261
NWK +N+++ GYH+ H + +L Y + Y S QR
Sbjct: 208 NWKCLAENFME-GYHLNATHPRTLRPVTPTELCEYVPGNGHFSAYRAHYTPDSPQR---- 262
Query: 262 STEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLK 320
T +D + ++ + F ++PN ++ Y P L + A T +V + L G +
Sbjct: 263 -TPFHEDLTQSERRSSFLFSVFPNLVVT-YMPHQTIYLCLRPAATD-QVAIKWGLAGHER 319
Query: 321 -DDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY-APSVEQTMYHFHSLL 376
DK IE+ + + ED E +Q+G+ S Y G A ++E T+ F+S +
Sbjct: 320 APDKESIERYVAFANAFNAEDRTKLETLQKGVSSTFYSPGPLSAENLEGTLRDFYSFM 377
>gi|334145325|ref|YP_004538535.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp.
PP1Y]
gi|333937209|emb|CCA90568.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp.
PP1Y]
Length = 411
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 162/365 (44%), Gaps = 44/365 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDF-FSGRIGEVEFVVCRDDNGKIH 92
P YT P F LE V +SW G + L+ P D+ R+G V ++ R + K+
Sbjct: 33 PGGRYTSPDFHELERKHVLSKSWVCAGRDEDLRKPGDYRLWDRLG-VPLLLIRGQDEKLR 91
Query: 93 AFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
AF+N CRH A ++ SG C YH W+YGLDG L N E GL+
Sbjct: 92 AFYNTCRHRGAPVVRDDSGNTRLLRCQYHSWSYGLDGRLKGVPDERDFACLNKAERGLIE 151
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
TWG +V +N+ ++A E + VV+ L G++ L + ++Y I
Sbjct: 152 ASCDTWGGWVFVNLDRDAQPLLEYLAPVVSE---------LDCVGME-KLRTVHVQDYPI 201
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSL------YEKVSIQRCESGSTEG 265
CNWKV D +L+ YH+ H A G+ LDS + ++ + +++ ++ EG
Sbjct: 202 ACNWKVAMDAFLE-VYHINTIHPTNA-GIMLDSKAAAMGLMEGGHSRMATRK---RMNEG 256
Query: 266 TDDTHRLGSKAIYAFIYPNF-MINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG------- 317
+ G+ I + P+F +N M NL+ P+ PT V+ ++ DG
Sbjct: 257 LNFVEFEGAPDIPSM--PDFYRLNNVAYMMFPNLITPVEPTGFPVLL-FWPDGVGHCTMQ 313
Query: 318 --------SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
+ AF ++ L V ED++ +QR LES + +G E+ +
Sbjct: 314 AIYVAPDWGEGERPAFWDRFLPIFHDVLQEDMMNLGPIQRSLESGGF-TGMMINYQERRI 372
Query: 370 YHFHS 374
Y FH
Sbjct: 373 YWFHE 377
>gi|262278301|ref|ZP_06056086.1| phenylpropionate dioxygenase [Acinetobacter calcoaceticus RUH2202]
gi|262258652|gb|EEY77385.1| phenylpropionate dioxygenase [Acinetobacter calcoaceticus RUH2202]
Length = 396
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 171/395 (43%), Gaps = 32/395 (8%)
Query: 4 SSCYSENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTD 63
+S S+ L+ Q++ NP I ++ P+ YT + E + ++W VG+
Sbjct: 2 NSRVSQQLITVQQVDNVLNP---ITESNGMPNLAYTSSEYFNFERDNILSKTWVCVGFAS 58
Query: 64 QLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFV-CPYHGW 122
L + V+ R+ G+I FHNVC H IL G + C YH W
Sbjct: 59 DLPKKSYVKPVNFMGMPLVMMRNREGEIQVFHNVCSHRGMILVQQEGTIEGVIRCQYHSW 118
Query: 123 TYGLDGTLLKATRITGI---KD--FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDS 177
+Y L+G L I GI KD F ++ GL L W V +N+ +A EE +
Sbjct: 119 SYDLNGNLKGTPHIGGINQHKDERFKCEKHGLKALRSEIWMDMVFVNISGDAPTFEEHIA 178
Query: 178 NVVA--NEWLGGSS-EILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+V +LG + E++ + + S+ E + NWK+ +NY + YH+P+ H
Sbjct: 179 PLVERWKPFLGENGLELIRNSKVGSTF------ELPVNSNWKLTVENYCE-AYHLPWVHP 231
Query: 235 GLASGLQL-DSYSTSLYEKVSIQRCESGSTEGTDDTH--RLGS-------KAIYAFIYPN 284
L + +L D Y+ ++ + Q + T TH + S A Y ++PN
Sbjct: 232 ALNTYSKLEDHYNIMFEDRFAGQGSYKYNLSATAGTHLPKFPSWPEDQLRHAEYVAVFPN 291
Query: 285 FMINRYGPWMDTNLVIPLAPTRC--KVVFDYFLDGSLKDD-KAFIEQSLKDSEQVQMEDI 341
++ ++ P+AP + K+ Y D SL A E +L+ + V ED+
Sbjct: 292 VLLGIQADHAFAMMIDPIAPEQTIEKLRLYYVGDESLDAKYDACREATLESWKVVFAEDV 351
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
E +Q+G SP + G ++P ++ + F L
Sbjct: 352 FAVETMQKGRHSPGFGGGVFSPEMDLPTHFFQKWL 386
>gi|73539656|ref|YP_300023.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72122993|gb|AAZ65179.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 373
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 149/349 (42%), Gaps = 32/349 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E T P+ +YT E +F R+W V + Q+ + + + + V R
Sbjct: 12 PGELGYTLPAHYYTSQDIFEHEKKTIFARNWICVMHRSQVAEANQYATVSVAGENVFVVR 71
Query: 86 DDNGKIHAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
+G + AF+NVC H A + G+GK K+ CPYH W++GLDG L+ + F
Sbjct: 72 GRDGVLRAFYNVCPHRAHELFPEGAGKAKNVITCPYHAWSFGLDGKLIHVRNAENVPGFC 131
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
GL P+ V + + +N+ A E+ +++ + EI + L
Sbjct: 132 KDNAGLTPVRVEEFCGLIFVNLDMNARPLAELAASL--------NDEIRARCPDVDKLVP 183
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST 263
+ Y ++ NWKV DNYL+ H AH L +++++Y +E I + G T
Sbjct: 184 ARKLTYEMKANWKVVVDNYLE-CLHCQTAHPALVESIRMETYK---HEVRGIYTSQVGQT 239
Query: 264 EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG--SLKD 321
D S A PN Y W + L + V + + +D +++
Sbjct: 240 RSGSDAFTYDSDA------PNTDFAAYWLWPNVTLNVLPGDGNYGVFYMFPVDADTTIQH 293
Query: 322 DKAFIEQSLKDSEQVQM----------EDIILCEGVQRGLESPAYCSGR 360
+ + + +EQ Q+ ED+ + E VQRGL+S Y +G+
Sbjct: 294 FEFYFRDATPTAEQEQLIDYYKNVLKPEDLSIVESVQRGLKSRGYRNGQ 342
>gi|254474464|ref|ZP_05087850.1| rieske 2Fe-2S domain protein [Ruegeria sp. R11]
gi|214028707|gb|EEB69542.1| rieske 2Fe-2S domain protein [Ruegeria sp. R11]
Length = 362
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 146/359 (40%), Gaps = 19/359 (5%)
Query: 29 KALTPP-----SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
K TPP + +YTD +E + R+WQ + QL++P D+ + +G+
Sbjct: 2 KDETPPIRSLDARYYTDQQVFEVEKSGLLARTWQFACHASQLENPGDYVAFDLGDESLFC 61
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
+ +G+I F+NVC+H A L +G+G VCPYH WTY L G L A + F+
Sbjct: 62 IKGRDGEIRTFYNVCQHRAHQLVSGAGSTRVIVCPYHAWTYELTGRLRAAPNAKSVPGFD 121
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ L + + FV +N+ +A ++ N E + N D L
Sbjct: 122 ASKICLTEVRTEVFLGFVFVNLDPDAAPMDDWFPNARTQ------LEEFAPNWAD--LKP 173
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYSTSL--YEKVSIQRCES 260
L E CNWKV +NY + YH H A+G ++ ++Y Y C
Sbjct: 174 LEWVEIPENCNWKVSVENYSE-CYHCTLNHPTFATGVIRPETYDIQPQGYCLRHTTECND 232
Query: 261 GSTEGTDDTHRLGSKAIYA--FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGS 318
S D + Y+ F++P F Y + VV+
Sbjct: 233 LSQMTYDIDSGFANHDKYSSWFLWPMFSFQVYPGNLLNTYHWRAVDADHVVVWRGRYSAG 292
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
+DD+ + +D EDI L E VQRGL+S Y G + HS++H
Sbjct: 293 EQDDETVRRMAQQDRATTVEEDIHLVESVQRGLKSRGYVPGPLVVDPACGVNSEHSVMH 351
>gi|419153915|ref|ZP_13698485.1| rieske domain protein [Escherichia coli DEC6C]
gi|377998825|gb|EHV61913.1| rieske domain protein [Escherichia coli DEC6C]
Length = 263
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 14/236 (5%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
NPQ +A T P+ +YTD + E VF +SW V ++ +L + D+ + I
Sbjct: 17 NPQ----EAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 73 VLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA 132
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 133 NFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVHD 184
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ 256
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q
Sbjct: 185 LKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQ 239
>gi|254819427|ref|ZP_05224428.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
gi|379749830|ref|YP_005340651.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
gi|379764652|ref|YP_005351049.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-64]
gi|387878504|ref|YP_006308808.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp.
MOTT36Y]
gi|443308284|ref|ZP_21038070.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. H4Y]
gi|378802194|gb|AFC46330.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
gi|378812594|gb|AFC56728.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-64]
gi|386791962|gb|AFJ38081.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp.
MOTT36Y]
gi|442763400|gb|ELR81399.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. H4Y]
Length = 447
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E P+ Y P+F ALE+ R++ R WQ+ D + P D+F R G ++ R
Sbjct: 23 PPENPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHIAAPGDYFEYRCGPYGVLIVR 82
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
DD+G+I AF NVCRH + L TGSG C YHGWT+ L G L + G +
Sbjct: 83 DDDGEIRAFQNVCRHRGNSLCTGSGSGLRELKCGYHGWTWDLAGALKRVPNRKGFGSLRM 142
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
+F L+P V TW V +N+ +A+ I + + +++
Sbjct: 143 SDFPLIPARVETWAGLVFVNLDLDAM------------------PLIEYLEAVPDDIAW- 183
Query: 205 CRRE---------YTIECNWKVFCDNYLDGGYHVPYAHKGL 236
CR E ++ NWK D Y + YH+ H L
Sbjct: 184 CRLEDFRCYATLTVDVDANWKTIADGYSE-TYHIQTLHPEL 223
>gi|429214246|ref|ZP_19205410.1| Rieske 2Fe-2S family protein [Pseudomonas sp. M1]
gi|428155841|gb|EKX02390.1| Rieske 2Fe-2S family protein [Pseudomonas sp. M1]
Length = 374
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 142/348 (40%), Gaps = 19/348 (5%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YT F E +VF +SW VG+ + +P + ++ +D G+I FHN+
Sbjct: 31 YTSEEFYRTEQDKVFAKSWVFVGFVHEFVEPGTCAPIEVAGQPLLIVSNDEGEIGVFHNI 90
Query: 98 CRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-----FNVKEFGLVP 151
CRH L T +S CPYH W+Y LDG L A G + F+ E GL
Sbjct: 91 CRHRGLKLVTDRCNVQSSISCPYHAWSYSLDGELEAAPHFGGFRKQDVPGFSRAEHGLKR 150
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ W ++ +N+ +A E+ + + + I ID +
Sbjct: 151 VRHVEWNDWIFVNLSGDAEAFEDYSRSFAEQIKILDVKLLKPIGKIDLG---------EV 201
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE-SGSTEGTDDTH 270
+CNWK +N+++ YHVP H ASG L + T + + + E T +
Sbjct: 202 KCNWKFLMENFIE-PYHVPIVHDQTASGQPLKDHYTIIDGRCLGSAIDLEAEKETTAKSS 260
Query: 271 RLGSKAIYAFIYPNFMINRYGP-WMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQS 329
L A Y ++PNF++ Y P +L IPL+ R + + G A E
Sbjct: 261 ALDMSARYLTLFPNFVLGIYLPDQAGVHLNIPLSADRTRQFRVLYSVGEQHYTDADKENL 320
Query: 330 LKDSEQVQMEDIILCEGVQRGLESPAYCSGR-YAPSVEQTMYHFHSLL 376
V ED + E +Q G SP G +P E + F +L+
Sbjct: 321 CNLWYSVHKEDHGIAELLQEGRRSPVMKDGGVMSPHWEDSANQFQNLV 368
>gi|159044331|ref|YP_001533125.1| putative ring-hydroxylating dioxygenase subunit alpha
[Dinoroseobacter shibae DFL 12]
gi|157912091|gb|ABV93524.1| putative ring-hydroxylating dioxygenase subunit alpha
[Dinoroseobacter shibae DFL 12]
Length = 383
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 151/380 (39%), Gaps = 28/380 (7%)
Query: 20 EFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEV 79
E P+ P A P++ YTDP E H + W + + P D
Sbjct: 7 ETMPEPPAAPARGLPNAHYTDPDMHRAEQHALLAAQWAGLAVASDVPAPGDALPLTFCGE 66
Query: 80 EFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITG 138
++ RD G++ F+NVCRH IL + + CPYH W Y DG L+ + G
Sbjct: 67 PLLLLRDRAGQVRVFYNVCRHRGMILVDAPRRIEGAIRCPYHSWCYATDGRLVTTPHVGG 126
Query: 139 I-----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
+ GL+ + W V +N+ A E +++++A W + L
Sbjct: 127 PGRNTHARIDRATLGLIEVPSHVWRDVVFVNLSGTAPPFAEANADLIA-RW-AALDQPLH 184
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY-------- 245
G DS + T+ CNWK+ +NY + YH+P+ H GL +L+ +
Sbjct: 185 HGGADSRFT------LTVRCNWKLAVENYCE-SYHLPWVHPGLNEISRLEDHYNIETPGA 237
Query: 246 ----STSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
T +Y++ + T + A Y +YPN ++ + L+ P
Sbjct: 238 FSGQGTEVYQRPRRPDGTPAFPDFTGLPAMWDTGAEYVALYPNVLLGAHRDHAFAILLHP 297
Query: 302 LAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
PTR + + + D A + + V ED+ + EG+Q G + + G +
Sbjct: 298 DGPTRTREHVHLYY-AAPDTDPAARAANAAQWKTVFEEDVFVVEGMQSGRAARGFDGGTF 356
Query: 362 APSVEQTMYHFHSLLHCNLT 381
+P ++ FH+ L+
Sbjct: 357 SPVMDGPTRCFHAWAAAALS 376
>gi|115374335|ref|ZP_01461619.1| rieske [2Fe-2S] domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310818962|ref|YP_003951320.1| rieske [2fe-2S] domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115368645|gb|EAU67596.1| rieske [2Fe-2S] domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309392034|gb|ADO69493.1| Rieske [2Fe-2S] domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 386
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 160/367 (43%), Gaps = 40/367 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y LALE VF R +VG++ Q+++P F + V +V RD +G + A
Sbjct: 34 PMDHYRSRERLALERRHVFERFPLIVGFSAQVREPGSFLTHDPSGVPILVTRDASGTLRA 93
Query: 94 FHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
F NVCRH + LA GSG +S C YHGW Y LDGTL + G D +E GLV
Sbjct: 94 FLNVCRHRGAKLAGEPCGSG-RSILACRYHGWRYALDGTLRAVPGLKGFPDLKREERGLV 152
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L V+ V + + + +LG E L G + + T
Sbjct: 153 SLPVSERHGLVFVRVTP--------GPELELERFLGPVFEELETFGFPRRVVFESSVR-T 203
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK---GLA---SGLQLDSYSTS----LYEKVSIQRCES 260
+ CNWK+ D L+ YH+ H+ GLA + + D+ + + + R E
Sbjct: 204 VACNWKLMIDTVLE-AYHISVLHRKTGGLAFEENQVLFDASTPPNGRFVLPLRGLTRPEG 262
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF-LDGSL 319
EG+ L + +++PN +I G + V P+ RC V L+G L
Sbjct: 263 EVAEGS----LLHYASPLYWMFPNSVILFSGSFAHMLSVFPVDEGRCTVQGSSLRLEGPL 318
Query: 320 KDDKAFIEQSLKDSEQ---VQMEDIILCEGVQRGLESPA---YCSGRYAPSVEQTMYHFH 373
D+A E K+ EQ EDI + E +Q G+ S A + G + SV T HFH
Sbjct: 319 --DEAAQEGLQKEYEQYWATIREDISVTETIQEGMASGANQEFLFGGFE-SVADT--HFH 373
Query: 374 SLLHCNL 380
S L L
Sbjct: 374 SALEAAL 380
>gi|13471363|ref|NP_102929.1| dioxygenase [Mesorhizobium loti MAFF303099]
gi|14022105|dbj|BAB48715.1| probable dioxygenase [Mesorhizobium loti MAFF303099]
Length = 391
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 42/372 (11%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T PSS Y D +L ++Y++W +V L P F RIG + VV RDD G +
Sbjct: 20 TLPSSAYWDGESYQRDLDAIWYKNWLLVCREADLAQPLAFRRFRIGTQDIVVLRDDTGAL 79
Query: 92 HAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AFHN CRH S L + G K CPYH W+Y L G L++ + F+ +
Sbjct: 80 RAFHNTCRHRGSQLCQESEGRLKARLITCPYHAWSYSLRGDLVRVPSKSLPDGFDKADHP 139
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + ++ W FV +N+ ++A + + + LG ++G ++ R+
Sbjct: 140 LYRVALSVWRGFVFINLQEDAAGSAQASFDPASGN-LGNWPLETLLSG------HVLRK- 191
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL---------DSYSTSLYEKVSIQRCE 259
+ CNWK+F +N+ + H P HK L+ + + D + +
Sbjct: 192 -VMHCNWKIFWENF-NECLHCPGVHKDLSRLVPIYGRGLMSRHDDPEWTHHADNDAPEFS 249
Query: 260 SGSTEGTDDTHRLG----------------SKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
G G + R G + YA P+ I + ++ T ++PL
Sbjct: 250 GGLRAGAETWSRDGQAHGPVFSGLTPAERAAGQTYATSLPSMFIVGHVDYVRTVRLVPLG 309
Query: 304 PTRCKVVFDY-FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
P ++V ++ F +L I+ + QV ED +CE QRGL S + +G
Sbjct: 310 PEETELVAEWLFAPEALAATD--IDNIVAFGTQVLEEDAAICEVNQRGLRSMRHQAGVLM 367
Query: 363 PSVEQTMYHFHS 374
P E ++ FH+
Sbjct: 368 PE-EYELHRFHN 378
>gi|400533473|ref|ZP_10797012.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
colombiense CECT 3035]
gi|400333817|gb|EJO91311.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
colombiense CECT 3035]
Length = 449
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P + P+ Y P+F ALE R++ R WQ+ D + +P D+F R G ++ R
Sbjct: 23 PPDNPTLVPAERYYSPAFAALETQRMWPRVWQLACMVDHVAEPGDYFEYRCGPYGVLIVR 82
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
DD+G + AF NVCRH + L TGSG C YHGWT+ L G L + G +
Sbjct: 83 DDDGALRAFQNVCRHRGNSLCTGSGSGLRELKCGYHGWTWDLAGALKRVPNRKGFGSLRM 142
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
+F L+P V TW V +N+ AV E+L + ++ ++ +
Sbjct: 143 SDFPLIPARVDTWAGLVFVNLDPGAVSLA---------EYLEAVPDDIAWCHLE---DFR 190
Query: 205 CRREYTIE--CNWKVFCDNYLDGGYHVPYAHKGL 236
C T+E NWK D Y + YH+ H L
Sbjct: 191 CYATLTVEVDANWKTIADGYSE-TYHIQTLHPEL 223
>gi|374620885|ref|ZP_09693419.1| ring-hydroxylating dioxygenase, large terminal subunit [gamma
proteobacterium HIMB55]
gi|374304112|gb|EHQ58296.1| ring-hydroxylating dioxygenase, large terminal subunit [gamma
proteobacterium HIMB55]
Length = 397
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 156/368 (42%), Gaps = 40/368 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++ YTD E RV ++W +G+ +++ + + ++ RD G
Sbjct: 30 PNTHYTDAVTWQEERDRVVAKTWAGLGFGADIQEAGCVYPVNFMGLPLLMVRDTEGVARV 89
Query: 94 FHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITG-----IKDFNVKEF 147
FHNVC H L G + CPYH W YGL G L I G I+ F+ E
Sbjct: 90 FHNVCSHRGMTLVAEKGSAGMVIRCPYHRWGYGLSGELKATPNIGGMGVHSIEGFDCSEH 149
Query: 148 GLVPLEVATWGPFVLLNMGKEA-VHQEEVDSNVVANEWLGG---SSEILSINGIDSSLSY 203
GL + V +N+ EA E +D + L G + ++S G S+
Sbjct: 150 GLKEVRSEELMGIVFINLSGEAPALSEHLDPILTRWGALAGKDFTGRLVSDMGPYGSM-- 207
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST 263
E ++E N+K+ +NY + YH+P+ H L + LD + + + +S SG
Sbjct: 208 ----ELSVESNYKLAIENYCE-SYHLPFVHPDLNTYSPLDEHYNVIVDPIS-----SGQG 257
Query: 264 EGTDDTHRLGSKAIYAF---------------IYPNFMINRYGPWMDTNLVIPLAP--TR 306
D R S + F +YPN ++ L++P +P T
Sbjct: 258 THVYDLTRGASTPLPVFANWDESRVKTAEYLSLYPNVLLGIQADHFFAILLMPESPETTT 317
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSV 365
++ F Y + +L D A QSL ++ V ED+ + EG+QRG SP + G +P +
Sbjct: 318 ERLQFLYSSEEALTDAYAERRQSLHEAWNLVFSEDVSVVEGMQRGRASPGFTGGVLSPLM 377
Query: 366 EQTMYHFH 373
+ HFH
Sbjct: 378 DIPTAHFH 385
>gi|342872519|gb|EGU74879.1| hypothetical protein FOXB_14614 [Fusarium oxysporum Fo5176]
Length = 438
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 18/342 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY P LE +F + W ++ + + +P + +F + R+ G+I+
Sbjct: 55 PASWYRSPEVYELERRAIFAKKWILITHKLRFTEPGSWVKFEQAGFQFFLVRNKQGQING 114
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN+CRH A I+ GK S C YHGW+YGL+G L KA +K F+ + GL+P+
Sbjct: 115 FHNICRHRAFPIMTEDKGKSSILSCKYHGWSYGLNGQLAKAPGYDDMKGFDKTKNGLLPI 174
Query: 153 EVATWGP-FVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
V F+ +N+ +A E S N E + ++ +Y
Sbjct: 175 HVHVDAKGFIWVNL--DASKTPEDFSTEFKNIDQMARHEGFNFEDYHFDHTWGMSGDY-- 230
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
NWK DNY + YH AH A L Y + +I+ + E + R
Sbjct: 231 --NWKTLADNY-NECYHCKTAHPDAADIADLSVYRVDT-KGGNIEHFVNTKPEMEEQGFR 286
Query: 272 LGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK-AFIEQSL 330
+ + + +PN + + +P +P C + ++ + + D+ I+
Sbjct: 287 I----VTNYYFPNACMTVSPNFFYMMRCVPTSPGHCSMEYEVYRHKNATDEGFQTIDAMF 342
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
K ++ ED LC Q+ L + + +G P +EQ +F
Sbjct: 343 K---RILAEDKWLCNNAQKNLNAGVFVNGEMHPKMEQGPLYF 381
>gi|375265421|ref|YP_005022864.1| dioxygenase subunit alpha [Vibrio sp. EJY3]
gi|369840742|gb|AEX21886.1| dioxygenase subunit alpha [Vibrio sp. EJY3]
Length = 375
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 18/337 (5%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
I+ A T P+ +YT E +F SW V ++ ++++ F + V+ R
Sbjct: 15 IDNAWTIPARYYTSEEVFETEKEVIFANSWICVAHSSEVREKNAFIKREMIGESLVIVRG 74
Query: 87 DNGKIHAFHNVCRHHA-SILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
+ + F+NVC H +++ SGK K+ CPYH W + LDG L+ AT + +F+
Sbjct: 75 RDDILRGFYNVCPHRGHQLISEESGKAKNVITCPYHAWAFKLDGELVHATNCENVNNFDK 134
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
LVP V + F+ +N+ D ++ + G ++ L
Sbjct: 135 DLASLVPFHVTEYAGFIFVNLSN--------DPKPISEQLPGLEEQVFKACPSVKELKRA 186
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTE 264
R NWK DNY++ YH P H A + + Y S+Q ++ ++
Sbjct: 187 ARFVSQTPANWKSIVDNYIE-CYHCPTNHVSFADSVDVGQYEHEFKTNWSVQVGKAKPSD 245
Query: 265 GT--DDTHRLGSKAIYAFIYPNFMINRY--GPWMDTNLVIPLAPTRCKVVFD-YFLDGSL 319
+ D + K +++P M N G +M P++ +D YFL+ L
Sbjct: 246 SSYQFDESLMDPKFFGFWLWPCTMFNMPPGGDFMTVIYEFPVSAGETLQFYDIYFLNDVL 305
Query: 320 KDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY 356
DD+ + ++ + ED+ L E VQ+GL S Y
Sbjct: 306 TDDQKRLVDWYENV--FRPEDLRLVESVQKGLTSRGY 340
>gi|146276039|ref|YP_001166199.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium
aromaticivorans DSM 12444]
gi|145322730|gb|ABP64673.1| Rieske (2Fe-2S) domain protein [Novosphingobium aromaticivorans DSM
12444]
Length = 430
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP+ E+ R+F ++W V + +L P F + +G +V RD G++H N
Sbjct: 26 YRDPALFEAEMDRIFEQTWVWVAHASELPSPNTFKTAHVGTNPVIVTRDKKGEVHVLLNR 85
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFNVKEFGLVPLEVA 155
CRH AS+ GK+S FVCPYHGW+Y DGTL K G DF+ +F LV L V
Sbjct: 86 CRHRAASVCEKKRGKQSVFVCPYHGWSYDPDGTLRKVPHRWGYGDDFDPTQFPLVSLRVE 145
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
+ + ++A EE A +W+ ++ G + L + + NW
Sbjct: 146 QYAGMIFATFNRDAPPLEE--HLGAARKWM----DLFMKQGAGFGVRALGQHSFRFPGNW 199
Query: 216 KVFCDNYLDGGYHVPYAHK 234
K+ +N D YH P HK
Sbjct: 200 KIQLENTTD-AYHFPIVHK 217
>gi|448660347|ref|ZP_21683407.1| putative dioxygenase alpha subunit YeaW [Haloarcula californiae
ATCC 33799]
gi|445759136|gb|EMA10422.1| putative dioxygenase alpha subunit YeaW [Haloarcula californiae
ATCC 33799]
Length = 379
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 157/367 (42%), Gaps = 45/367 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ ++T LE ++F R W G+ + + +P +F+ IG+ + ++ R + +I A
Sbjct: 26 PAKYFTSSEIHELEKEKIFGRYWVYAGHANAITEPGAYFTRTIGDRQVIIVRGHDDEIRA 85
Query: 94 FHNVCRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL---------------LKA 133
F NVC H S + T CPYH W+Y LDG L L
Sbjct: 86 FFNVCAHRGSKMVEDTPMTDPENMGRIRCPYHMWSYDLDGDLESTPQSFEEAGLNPDLSD 145
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS 193
+ G+ + E L ++ GPFV LN ++ + E L E +
Sbjct: 146 DEVCGM---DASENSLSEVKTDRIGPFVFLNFAQDPMPLAEQAGT------LKSELEAMP 196
Query: 194 INGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV 253
+ + + Y+ +ECNWK F NY + H H+ + ++L + +
Sbjct: 197 LGEYEHAARYVSE----VECNWKTFAGNYSECD-HCHANHQDWITDIELAESELEVNDYH 251
Query: 254 SIQRCESGSTEGTDDTHRLGS--KAIYAFIYPNFMINRYGPW--MDTNLVIPLAPTRCKV 309
I E +D R+ +A + + +PNF +N YG T ++ P+ R ++
Sbjct: 252 WI--LHYTHDEDVEDEMRIHDEHEAKFYYFWPNFTVNMYGTADGYGTYIIDPIDEGRFQL 309
Query: 310 VFD-YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
+ D YF D + D + ++ ++ S Q+Q ED L E GL+S A + P+ E T
Sbjct: 310 IADYYFSDEEMTDAE---QEFVQTSRQLQEEDFELVERQYEGLKSGALAQAQLGPN-EHT 365
Query: 369 MYHFHSL 375
++ H L
Sbjct: 366 VHRLHRL 372
>gi|254481244|ref|ZP_05094489.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
gi|214038407|gb|EEB79069.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
Length = 379
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 149/362 (41%), Gaps = 42/362 (11%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T PS WY + +E +F R W VG +Q+ +P + ++ R+ +G++
Sbjct: 5 TLPSFWYLNNDVFQIEREHIFMREWLCVGRKEQIPNPGSHRVLDLYGESVLLLRNSDGQL 64
Query: 92 HAFHNVCRH---------------HASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRI 136
AF+NVCRH H L+ G + CPYH WTY LDG LL+A +
Sbjct: 65 RAFYNVCRHRGARLCPDAHDALGSHGVTLSGGVMESCSIRCPYHAWTYSLDGDLLRAPHL 124
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
+ ++ L P+ VA+WG FV +++ + ++ L+ G
Sbjct: 125 KAETEIDLANLSLHPVSVASWGGFVFVHLTPDEAPDFPAQIATTDTQF---QRYPLAELG 181
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS---------GLQLDSYST 247
I S+S Y + NWKV C+NY + YH H L G +LD
Sbjct: 182 IGHSIS------YEVAANWKVICENY-NECYHCGPVHPELCEVVPVFKQRGGAELDWDRG 234
Query: 248 SLYEKVSIQRCESGSTE-----GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL 302
+ + ++ SG+TE G + R+ K +YPN ++ + ++
Sbjct: 235 VPHREGAVTFTASGTTERRMFPGLNADERIRHKG--DLVYPNLFLSASSDHVAVFVLQAK 292
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ + + + F D +V +D +CE VQ+G+ S + +G +
Sbjct: 293 SANLTTIDCHFLFESHEMSKPGFDPSDAVDFWHKVNCQDWAICERVQQGMNSRVHRAGIF 352
Query: 362 AP 363
+P
Sbjct: 353 SP 354
>gi|346993646|ref|ZP_08861718.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Ruegeria sp.
TW15]
Length = 365
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 135/335 (40%), Gaps = 21/335 (6%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDP A E+ + R+WQ G+ QL + D+F+ I R + I F
Sbjct: 10 ARYYTDPDIYAQEMSGLLARTWQFAGHVSQLPNVGDYFTFEIAGQSLFSIRGRDEVIRTF 69
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
+NVC+H A + TG+G VCPYH WTY L G L I + F+ E L +
Sbjct: 70 YNVCQHRAHEMVTGTGNTRVVVCPYHAWTYELTGHLRAGPNIKSVPGFDRSEICLTEVRT 129
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG-SSEILSINGIDSSLSYLCRREYTIEC 213
+ F+ +N+ +A ++W G EI L+ L E C
Sbjct: 130 EDFHGFLFVNLDDDA---------APMDDWFPGVREEIAEFVPNVVRLAPLEWVEVPENC 180
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASG--------LQLDSYSTSLYEKVSIQRCESGSTEG 265
NWKV +NY + YH P H A G +Q D+ + + + T
Sbjct: 181 NWKVSVENYSE-CYHCPINHATFAEGVIKPETYDIQPDADGGYVLRHTTECQPMKKMTYP 239
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA 324
D + F++P F Y G ++T C V +F + +
Sbjct: 240 VDMSVPHAGDYQSWFLWPMFSFQCYPGNVLNTYHWRAHGHENCTVWRGWFTPEG-AESEV 298
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ +D E EDI L E VQRGL+S Y G
Sbjct: 299 IRGLAAQDRETTVKEDIHLVESVQRGLKSRGYRPG 333
>gi|453328779|dbj|GAC88965.1| Rieske (2Fe-2S) domain-containing protein [Gluconobacter
thailandicus NBRC 3255]
Length = 396
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P E+A + P YTD F E +F + W +G +P D+F+ I + +V
Sbjct: 19 LPTEEAESLPPLCYTDAGFYEFEKKAIFSKEWLCMGRESWAANPGDYFTSFIADEPLIVA 78
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R +G + A +VC+H A ++A GSGK FVCPYH WTY LDG+L A + F+
Sbjct: 79 RGRDGVLRAMSSVCQHRAMLVAEGSGKARAFVCPYHHWTYALDGSLAAAPAMERSCKFHK 138
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSLSY 203
++F L + W FV +N D+NV L SE+L + ++
Sbjct: 139 EDFNLPVFALEIWEGFVFINF----------DTNVAPLAPRLAKVSEVLRGYDLPNAQGD 188
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKG 235
E NWKV +N D GYH H+G
Sbjct: 189 KPAEEQRYPWNWKVMFENNND-GYHASKLHQG 219
>gi|379757129|ref|YP_005345801.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-02]
gi|378807345|gb|AFC51480.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-02]
Length = 447
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 8 SENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD 67
+ N + V E P E P+ Y P+F ALE+ R++ R WQ+ D +
Sbjct: 5 ARNPTRTRSHVQEDAIGTPPENPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHIAA 64
Query: 68 PQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGL 126
P D+F R G ++ RDD G+I AF NVCRH + L TGSG C YHGWT+ L
Sbjct: 65 PGDYFEYRCGPYGVLIVRDDEGEIRAFQNVCRHRGNSLCTGSGSGLRELKCGYHGWTWDL 124
Query: 127 DGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG 186
G L + G + +F L+P V TW V +N+ +A+
Sbjct: 125 AGALKRVPNRKGFGSLRMSDFPLIPARVETWAGLVFVNLDLDAM---------------- 168
Query: 187 GSSEILSINGIDSSLSYLCRRE---------YTIECNWKVFCDNYLDGGYHVPYAHKGL 236
I + + +++ CR E ++ NWK D Y + YH+ H L
Sbjct: 169 --PLIEYLEAVPDDIAW-CRLEDFRCYATLTVDVDANWKTIADGYSE-TYHIQTLHPEL 223
>gi|149203769|ref|ZP_01880738.1| Rieske (2Fe-2S) protein [Roseovarius sp. TM1035]
gi|149142886|gb|EDM30928.1| Rieske (2Fe-2S) protein [Roseovarius sp. TM1035]
Length = 385
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 165/382 (43%), Gaps = 53/382 (13%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N + P+E+A P++ Y DP+ E H + + W + + +P D +
Sbjct: 9 NVRTPVEQANGLPNAHYIDPAVFEEEKHALLFSQWAGLAVGADVPEPGDAKPLEFLGMPL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI- 139
++ RD +G++ F N+CRH IL K + CPYH W Y G L+ + G
Sbjct: 69 LLLRDKDGEVRVFQNICRHRGMILVEEPRKIEGAIRCPYHSWCYSTKGALVSTPHVGGPG 128
Query: 140 ----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
E GL + W V +N+ +A + ++++A W G ++ +
Sbjct: 129 HNTHASIKRDELGLTEIRSHIWRDVVWINVSGDAPAFDVAMADLIAR-W--GEFDLPVYH 185
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY---------- 245
G S R ++ NWK+ +NY + YH+P+ H GL S +L+ +
Sbjct: 186 GGADS-----RFTLEVQTNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYHIEKPGAYS 239
Query: 246 --STSLYEKVSIQRCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGPWMDTNLV 299
T +Y +++ E+G T D +G+K A Y YPN ++ G D V
Sbjct: 240 GQGTMVYRQLT---NETGQT--FPDFAEVGAKWNEQAEYVAAYPNVLL---GVHRDHAFV 291
Query: 300 IPLAPTRCKVVFDYF--------LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGL 351
I L P + ++ DG L+ + +++ + EDI + EG+QRG
Sbjct: 292 IILEPKGPERTVEHIHLYYSVPNADGGLRLRNTQLWKTVFE------EDIFVVEGMQRGR 345
Query: 352 ESPAYCSGRYAPSVEQTMYHFH 373
+P + GR++P ++ + FH
Sbjct: 346 HAPYFDGGRFSPVMDSPTHCFH 367
>gi|406033399|ref|YP_006732291.1| benzene 1,2-dioxygenase subunit alpha [Mycobacterium indicus pranii
MTCC 9506]
gi|405131944|gb|AFS17199.1| Benzene 1,2-dioxygenase subunit alpha [Mycobacterium indicus pranii
MTCC 9506]
Length = 447
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 104/239 (43%), Gaps = 30/239 (12%)
Query: 8 SENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKD 67
+ N + V E P E P+ Y P+F ALE+ R++ R WQ+ D +
Sbjct: 5 ARNPTRTRSHVQEDAIGTPPENPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHIAA 64
Query: 68 PQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGL 126
P D+F R G ++ RDD+G+I AF NVCRH + L TGSG C YHGWT+ L
Sbjct: 65 PGDYFEYRCGPYGVLIVRDDDGEIRAFQNVCRHRGNSLCTGSGSGLRELKCGYHGWTWDL 124
Query: 127 DGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG 186
G L + G + +F L+P V TW V +N+ +A+
Sbjct: 125 AGALKRVPNRKGFGSLRMSDFPLLPARVETWAGLVFVNLDLDAM---------------- 168
Query: 187 GSSEILSINGIDSSLSYLCRRE---------YTIECNWKVFCDNYLDGGYHVPYAHKGL 236
I + + +++ CR E ++ NWK D Y + YH+ H L
Sbjct: 169 --PLIEYLEAVPDDIAW-CRLEDFRCYATLTVDVDANWKTIADGYSE-TYHIQTLHPEL 223
>gi|410624093|ref|ZP_11334901.1| hypothetical protein GPAL_3427 [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410156433|dbj|GAC30275.1| hypothetical protein GPAL_3427 [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 380
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 154/365 (42%), Gaps = 37/365 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++ + D LE ++F W +G Q+ P D +I + R+ NG+I
Sbjct: 18 PAAAFKDKDTYQLECEKLFTNGWASIGCGQQISKPGDILPVKIAGHSLIAIRNKNGEIGV 77
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG-----IKDFNVKEFG 148
FHN+CRH + L K VCPYH WTY +DG LL A G + + +
Sbjct: 78 FHNICRHKGAPLVDEPCNKRSLVCPYHKWTYKIDGNLLSAPSYFGNENKVMSAEDKADKS 137
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L+ + A W + +N+ +A E + + L S I I ++ +
Sbjct: 138 LISVRFAIWWDIIFVNIDGQA---EPFGDFIQPLDELLASYPQHDIRKISTT-------D 187
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
Y+ E NWK+ DN+LD GYHVP+ H L S L+ D L E + R +G++
Sbjct: 188 YSGEVNWKLAVDNFLD-GYHVPFVHSQACSLESVLEQDDL--LLSENIVGLRLANGASAK 244
Query: 266 TDDT------------HRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
T + G++ + I+PN + W+ T ++ P+ T
Sbjct: 245 QAKTAKQLPHFTGLPQEKRGTQQWFG-IFPNTLFFVDPCWVQTIVIKPMGETTTAESLSI 303
Query: 314 FL--DGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
++ D + D+ A + +L + +V +DI L + +Q + G + +Q
Sbjct: 304 YVVNDEAASDEYAAEQTTLHEILNEVNQQDIELLDKLQVTRSNEIANQGHLNAAWDQVNM 363
Query: 371 HFHSL 375
FH +
Sbjct: 364 TFHQM 368
>gi|399018161|ref|ZP_10720346.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398101947|gb|EJL92144.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 428
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 10/210 (4%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
++ A+ PS YTDP +E+ ++FY++W V + +L++P DF + +IG +V RD
Sbjct: 20 VQGAVVDPS-LYTDPQIFEVEMDKIFYKTWVWVAHESELRNPGDFKTAQIGRQPVIVVRD 78
Query: 87 DNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
GK++ N CRH A++ G + F CPYH W+YGLDG L G +D K
Sbjct: 79 RGGKVNVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRGLPYPEGYEDVIEK 138
Query: 146 -EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
+ L L V +G + + + E+ N A W+ ++ G +
Sbjct: 139 ADLPLQSLRVGIYGGMIFASFNADIEPLEDFLGN--ARHWI----DLFMKQGAGFPIKTQ 192
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+++ + NWK+ +N D GYH P HK
Sbjct: 193 GEHKFSFKGNWKIQLENTTD-GYHFPVVHK 221
>gi|114769528|ref|ZP_01447154.1| probable dioxygenase alpha chain [Rhodobacterales bacterium
HTCC2255]
gi|114550445|gb|EAU53326.1| probable dioxygenase alpha chain [Rhodobacterales bacterium
HTCC2255]
Length = 381
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 157/374 (41%), Gaps = 42/374 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P+ Y D E V + +W +G+ D + +V R
Sbjct: 10 PLNTAKGLPNEHYIDDKIFQEEKESVLFSNWSAIGFAKDTPKVGDVNPITFLGMPLLVVR 69
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
D++ K+ + N CRH +L + + CPYH W YGLDG L + G
Sbjct: 70 DNDKKVRVYQNTCRHRGMVLISERRNIRGTIRCPYHSWCYGLDGQLRSTPHVGGPGQNTH 129
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
D E GLV + + V +N+ A EEV S+++ N+W + + DS
Sbjct: 130 PDIKRNELGLVEIRSHVFMDVVFVNISNNAASFEEVHSDII-NQWQEFDKPLY--HNEDS 186
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQRC 258
S E T++ NWK+ +NY + YH+P+ H GL +L D Y K S Q
Sbjct: 187 SF------ELTVKSNWKLAVENYCE-SYHLPWVHPGLNLVSRLEDHYHIENTLKYSGQGS 239
Query: 259 ESGST-EGTDD---------THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP---- 304
S +G D+ + + + Y +YPN + +G D I L P
Sbjct: 240 YVYSQLKGKDNEVFPDFDGLKKKWNTASEYISLYPNVL---FGVHRDHTYAIILEPISTN 296
Query: 305 -TRCKVVFDYFLDGSLKDDKA-FIEQSLKDS---EQVQMEDIILCEGVQRGLESPAYCSG 359
TR V Y S + KA F + +K+ E V EDI + EG+Q G + G
Sbjct: 297 KTREHVAIYY---ASAEATKARFKDLRIKNKFFWEDVFKEDIFVVEGMQEGRNGKFFDGG 353
Query: 360 RYAPSVEQTMYHFH 373
+++P+++ + FH
Sbjct: 354 KFSPAMDGPTHLFH 367
>gi|404402901|ref|ZP_10994485.1| putative iron/sulfur binding protein [Pseudomonas fuscovaginae
UPB0736]
Length = 431
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYSDDRLFDIDMQEIFHKEWLIAGMTSEIPTKGNYLTLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L TG GK + VCPYH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTGEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|302888615|ref|XP_003043194.1| hypothetical protein NECHADRAFT_51619 [Nectria haematococca mpVI
77-13-4]
gi|256724109|gb|EEU37481.1| hypothetical protein NECHADRAFT_51619 [Nectria haematococca mpVI
77-13-4]
Length = 438
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 164/368 (44%), Gaps = 24/368 (6%)
Query: 12 VAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDF 71
V+AQK N +AL P+SWY+ LE +F + W +V T +L+ P+
Sbjct: 35 VSAQKSAAGRNSFTTTTRAL--PASWYSSQEIYELERRAIFSKKWILV--THKLRFPESG 90
Query: 72 FSGRIGEV--EFVVCRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDG 128
R E +F + ++ +GKI+ FHN+CRH A I+ G+ S C YHGW+YGL+G
Sbjct: 91 SWIRYEEAGFQFFLVKNKDGKINGFHNICRHRAFPIVTKEQGQSSVLSCKYHGWSYGLNG 150
Query: 129 TLLKATRITGIKDFNVKEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
L KA +K F+ GL P+ V F+ +N+ +A + E S +
Sbjct: 151 QLAKAPGYLDMKGFDKTNNGLFPIHVYEDAKGFIWVNL--DASKKPEAWSQDFHK--IDQ 206
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
S S N D + E + + NWK DNY + YH AH S L +Y
Sbjct: 207 MSRHESFNFEDYHFDHTW--EMSGDYNWKTLADNY-NECYHCKTAHPDAGSVADLSAYKV 263
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ +I+ + + + ++ G K + + +PN + + +P + C
Sbjct: 264 DP-KGGNIEHFANTTAKQEEE----GLKIVSNYYFPNACMTVSPHFFYMMRCVPTSANHC 318
Query: 308 KVVFDYFLDGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
+ ++ + + D D I++ K ++ ED LC Q+ L + + +G P +E
Sbjct: 319 SMEYEVYRHKNASDEDFTKIDEMFK---RILSEDKWLCNNAQKNLNAGVFINGEMHPKME 375
Query: 367 QTMYHFHS 374
Q +F S
Sbjct: 376 QGPLYFQS 383
>gi|118473905|ref|YP_885066.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium smegmatis
str. MC2 155]
gi|118175192|gb|ABK76088.1| Rieske 2Fe-2S domain protein [Mycobacterium smegmatis str. MC2 155]
Length = 394
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 153/357 (42%), Gaps = 32/357 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP+ A E +F W VG+ L+ P + G ++ R ++ ++ A
Sbjct: 41 PREAYVDPAVFAWEQQAIF-SGWTCVGHAADLETPGAQRAVGSGANGVLLVRGEDNRVRA 99
Query: 94 FHNVCRH--HASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
F N CRH H + S K+ VCPYH W+Y LDG++ A + F+ FGLV
Sbjct: 100 FANACRHRGHELLSCGASAKRRSIVCPYHAWSYRLDGSVRNAPGFKDVDGFDPGGFGLVE 159
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
L + W ++ ++ + D++ + + G E++S + L+ + R Y +
Sbjct: 160 LRLVDWHGWLFVDPSGQ-------DADFATH--VAGLEEVVSPYRPE-DLTIVARHSYEL 209
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLA------SGLQLDSYSTSLYEKVS-IQRCESGSTE 264
NWK+ +NY + YH H L+ SG L+ + +S I E+ S +
Sbjct: 210 AANWKIIAENYQE-CYHCSSIHPELSRISPPTSGENLELPGAWMGGWMSIIDGAETMSLD 268
Query: 265 GTD--------DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
G H L +Y YPN +++ + ++ T+L+ PLA R V +
Sbjct: 269 GRSGGVAIAGLSEHEL-RTVMYLVGYPNLLVSLHPDYVMTHLMTPLAVDRTHVECAWAFP 327
Query: 317 GSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ F D + +D CE VQRGL SP G AP E +Y F
Sbjct: 328 REAAERPGFDPAYAVDFWDLTNRQDWAACESVQRGLSSPHARPGPLAPD-EDGVYQF 383
>gi|108812250|ref|YP_648017.1| dioxygenase subunit alpha, partial [Yersinia pestis Nepal516]
gi|229902585|ref|ZP_04517702.1| Benzoate 1,2-dioxygenase [Yersinia pestis Nepal516]
gi|270490239|ref|ZP_06207313.1| Rieske (2Fe-2S) domain protein [Yersinia pestis KIM D27]
gi|108775898|gb|ABG18417.1| dioxygenase alpha subunit [Yersinia pestis Nepal516]
gi|229680032|gb|EEO76131.1| Benzoate 1,2-dioxygenase [Yersinia pestis Nepal516]
gi|270338743|gb|EFA49520.1| Rieske (2Fe-2S) domain protein [Yersinia pestis KIM D27]
Length = 252
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 10/230 (4%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
+A T P+ +YT + E RVF SW + + ++ P D+ + I V+ R
Sbjct: 19 REAYTIPAYFYTQQAAFEHEKERVFTNSWICMAHGSEVAQPNDYITREIIGENIVIVRGR 78
Query: 88 NGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ + AF+NVC H L +G GK K+ CPYH WT+ LDG L A + +F+
Sbjct: 79 DSVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWTFKLDGELAHARNCENVTNFDKDR 138
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L P+ + + F+ +NM D+ V + G ++ L R
Sbjct: 139 ATLFPVRLEEYAGFIFINMNP--------DAESVEQQLPGLQDKVFEACPDVHELKLAAR 190
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ 256
NWK DNY++ YH AH G A +Q+D Y +++ S+Q
Sbjct: 191 FTTRTPANWKNIVDNYME-CYHCEPAHPGFADSVQIDRYWHTMHGNWSLQ 239
>gi|254460322|ref|ZP_05073738.1| rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2083]
gi|206676911|gb|EDZ41398.1| rieske (2Fe-2S) protein [Rhodobacteraceae bacterium HTCC2083]
Length = 386
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 163/383 (42%), Gaps = 45/383 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ +A P+ Y D E H V + SW + + + D + +V R
Sbjct: 14 PVSEAQGLPNPHYIDSQVYNEEKHAVLFSSWSGLAVAADVPEIGDAVPLTFVGMPLLVIR 73
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
D + + F N CRH IL K + CPYH W Y +G L+ + G
Sbjct: 74 DKSNTVRVFQNTCRHRGMILVEEPRKIEGAIRCPYHSWCYSTEGRLVSTPHVGGPGQNTH 133
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+ + GL+ + W + +N+ A+ E+ +++++A W + L G DS
Sbjct: 134 ESIDRDLLGLIEVPSHIWRDVIWINIDGTALPFEDANADLIA-RW-AEFDKPLYHGGADS 191
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
+ + +ECNWK+ +NY + YH+P+ H GL +SYS L + I++ +
Sbjct: 192 AF------QLEVECNWKLAVENYCES-YHLPWVHPGL------NSYS-RLEDHYHIEKQD 237
Query: 260 SGSTEGT--------------DDTHRLGSK----AIYAFIYPNFMINRYGPWMDTNLVIP 301
S S +GT D +G K A Y +YPN ++ G D I
Sbjct: 238 SYSGQGTLVYRQLKAADGQVFADFEDVGEKWNEAAEYITVYPNVLL---GVHRDHAFAIV 294
Query: 302 LAPTRCKVVFD--YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
L P + + + + K + A + + + V EDI + EG+Q+G SP + G
Sbjct: 295 LVPKSTERTVENIHLYYATPKTNDAMRAANTEQWKLVFEEDIFVVEGMQKGRHSPNFDGG 354
Query: 360 RYAPSVEQTMYHFHSLLHCNLTN 382
R++ ++ + FH+ + + N
Sbjct: 355 RFSAVMDSPTHCFHAWIAGKIEN 377
>gi|399985068|ref|YP_006565416.1| rieske (2Fe-2S) protein [Mycobacterium smegmatis str. MC2 155]
gi|399229628|gb|AFP37121.1| Rieske (2Fe-2S) region [Mycobacterium smegmatis str. MC2 155]
Length = 382
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 153/357 (42%), Gaps = 32/357 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP+ A E +F W VG+ L+ P + G ++ R ++ ++ A
Sbjct: 29 PREAYVDPAVFAWEQQAIF-SGWTCVGHAADLETPGAQRAVGSGANGVLLVRGEDNRVRA 87
Query: 94 FHNVCRH--HASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
F N CRH H + S K+ VCPYH W+Y LDG++ A + F+ FGLV
Sbjct: 88 FANACRHRGHELLSCGASAKRRSIVCPYHAWSYRLDGSVRNAPGFKDVDGFDPGGFGLVE 147
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
L + W ++ ++ + D++ + + G E++S + L+ + R Y +
Sbjct: 148 LRLVDWHGWLFVDPSGQ-------DADFATH--VAGLEEVVSPYRPE-DLTIVARHSYEL 197
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLA------SGLQLDSYSTSLYEKVS-IQRCESGSTE 264
NWK+ +NY + YH H L+ SG L+ + +S I E+ S +
Sbjct: 198 AANWKIIAENYQE-CYHCSSIHPELSRISPPTSGENLELPGAWMGGWMSIIDGAETMSLD 256
Query: 265 GTD--------DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
G H L +Y YPN +++ + ++ T+L+ PLA R V +
Sbjct: 257 GRSGGVAIAGLSEHEL-RTVMYLVGYPNLLVSLHPDYVMTHLMTPLAVDRTHVECAWAFP 315
Query: 317 GSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ F D + +D CE VQRGL SP G AP E +Y F
Sbjct: 316 REAAERPGFDPAYAVDFWDLTNRQDWAACESVQRGLSSPHARPGPLAPD-EDGVYQF 371
>gi|399059498|ref|ZP_10745144.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
gi|398039437|gb|EJL32573.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
Length = 397
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 157/360 (43%), Gaps = 34/360 (9%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+ + +A+T P YT F E +++ WQ VG + +P +F++ R +V
Sbjct: 19 VDLAEAVTLPPECYTGTDFYEFEKDALYFNEWQCVGRESWIAEPGEFYTTRTVNEPIIVA 78
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R+ +G+I+A VC+H A ++A G+GK F+CPYH W+Y LDGTL+ A + +F+
Sbjct: 79 RNLSGEINAMSAVCQHRAMLVAEGAGKARGFLCPYHHWSYSLDGTLVAAPAMNKTCNFDR 138
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
KE L V W F+ +N ++A L +E +S + S+
Sbjct: 139 KENSLPRFAVEIWNGFIFINFDQDA---------APLGPRLAKVAEAISGYDLASAEGPR 189
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKG-----LASGLQ-----------LDSYSTS 248
+ NWKV +N D GYH H G + SG ++ +
Sbjct: 190 PDPAAKLPWNWKVMFENNND-GYHASRLHAGPLHDFVPSGRAEFPHSEPEDAGFLRFNGT 248
Query: 249 LYEKVSI---QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPT 305
L+ S QR G D R + +A + P+ + + ++ P P
Sbjct: 249 LHPDASFNATQRAVLPVFPGLKDEAR--QRMTFANVPPSLSLVMMSDMVIYLILRPDGPE 306
Query: 306 RCKVVFDY-FLDGSLKDD--KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
++ + F G++ + + ++ +L S ++ +D+ + E VQ GL S GRY+
Sbjct: 307 SHELETGFLFAPGAMAEPNFENLLDMNLSASGKIIAQDMHVDELVQEGLRSRFAPRGRYS 366
>gi|374631619|ref|ZP_09703993.1| ring-hydroxylating dioxygenase, large terminal subunit
[Metallosphaera yellowstonensis MK1]
gi|373525449|gb|EHP70229.1| ring-hydroxylating dioxygenase, large terminal subunit
[Metallosphaera yellowstonensis MK1]
Length = 433
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP LE+ ++FY W +G+ QLK+P D+ + IG V ++ R + G+I N
Sbjct: 27 YTDPKIFELEMEKIFYGGWVFLGHESQLKEPNDYVTTHIGSVPVILVRTEEGEIVGLVNR 86
Query: 98 CRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFNVKEFGLVPLEVA 155
CRH S++ T G +F CPYHGWTY DG L+ G K F+V++ L + +A
Sbjct: 87 CRHRGSVVCLTRMGNSKFFRCPYHGWTYSNDGRLVGIPDREGYPKTFDVEDLNLTRIRIA 146
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI------NGIDSSLSYLCRREY 209
F+ ++ ++ EE LG + L + GI Y+ +
Sbjct: 147 NKYGFIFGSLAEDPPSIEEH---------LGSAESFLRVLGNKYPKGIRLLEGYMSAK-- 195
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
I NWK+ + +D YHVP+AH+ L+
Sbjct: 196 -IRANWKILLEGSVD-HYHVPFAHESTTEALK 225
>gi|333918681|ref|YP_004492262.1| putative dioxygenase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480902|gb|AEF39462.1| putative dioxygenase [Amycolicicoccus subflavus DQS3-9A1]
Length = 387
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 161/381 (42%), Gaps = 36/381 (9%)
Query: 23 PQIP-IEKALTPP--SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEV 79
P+IP I+ AL P +YTDP E ++F W + L P F +G
Sbjct: 7 PEIPDIDSALMPTLGGRYYTDPGIFVSEQEQIFESMWFCAARSSDLAAPGAFKKVTVGRE 66
Query: 80 EFVVCRDDNGKIHAFHNVCRHHASILAT-GSGK-KSWFVCPYHGWTYGLDGTLLKATRIT 137
++ R +G + AF N+CRH ++L T SG+ + F CPYH WTYGLDG L+ A +
Sbjct: 67 SVLIVRGRDGGLRAFLNICRHRGAMLCTEDSGQVRRNFQCPYHAWTYGLDGRLVAAPNMA 126
Query: 138 GIK-----DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEIL 192
+K D + +E+GLV + + W + + + E NE +G +E L
Sbjct: 127 ALKDAAGRDLDRQEYGLVSVALREWLGYAWVCLADTPPSFE--------NEVVGAVTERL 178
Query: 193 S-INGID----SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL-------ASGL 240
+ ID SL R Y + NWK+ +N+++ YH H L A GL
Sbjct: 179 GDASVIDRYEIGSLEVGRRITYDVAANWKLIIENFME-CYHCATIHPELTEVLPEFADGL 237
Query: 241 QLD---SYSTSLYEKVSIQRCESGST-EGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMD 295
+ + + V + G+ + + YA + P IN +
Sbjct: 238 AAQYFVGHGAAFGDDVDGFTVDGGAGFDALPGVTEAEDRKYYAITVRPQIFINLVPDHVI 297
Query: 296 TNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPA 355
+ + PL+ R V D+ ++ + + +S++ +V +D CE Q + S A
Sbjct: 298 FHRMYPLSADRTIVECDWLYSRNVTESGRDVSRSVELFHRVNQQDFDACERTQPTMSSKA 357
Query: 356 YCSGRYAPSVEQTMYHFHSLL 376
Y +G E + FH L
Sbjct: 358 YRNGGVLVPSEHHIGEFHGWL 378
>gi|118463382|ref|YP_884390.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium 104]
gi|118164669|gb|ABK65566.1| Rieske [2Fe-2S] domain protein [Mycobacterium avium 104]
Length = 448
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y P+F ALE+ R++ R WQ+ D + P D+F R G ++ RDD+G + A
Sbjct: 28 PAERYYSPAFAALEVERMWPRVWQLACMVDHVATPGDYFEYRCGPYGVLIVRDDDGALRA 87
Query: 94 FHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F NVCRH + L +GSG C YHGWT+ L G L + G + ++ L+P
Sbjct: 88 FQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGSLRLSDYPLIPA 147
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V TW V +N+ +A+ E+L E ++ +D + C T+E
Sbjct: 148 RVDTWAGLVFVNLDPDAMPLP---------EYLEAIPEDIAWCRLD---EFRCYATLTVE 195
Query: 213 --CNWKVFCDNYLDGGYHVPYAHKGL 236
NWK D Y + YH+ H L
Sbjct: 196 VDANWKTIADGYSE-TYHIQTLHPEL 220
>gi|423012813|ref|ZP_17003534.1| Rieske (2Fe-2S) domain-containing protein [Achromobacter
xylosoxidans AXX-A]
gi|338784202|gb|EGP48543.1| Rieske (2Fe-2S) domain-containing protein [Achromobacter
xylosoxidans AXX-A]
Length = 369
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 20/338 (5%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+ + P+S Y D L EL F VVG + Q+++P + + FVV RD
Sbjct: 16 RVVQVPASVYMDNGVLERELDTAFRDYPLVVGASSQVREPGSYLLSPWDRLPFVVVRDKG 75
Query: 89 GKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G + AF NVCRH + L +G+ K+ +F CP+HGW YGLDG L T+ + + +
Sbjct: 76 GALRAFLNVCRHRGARLVSGNEKELKFFTCPFHGWVYGLDGELKGVTKPYNFPELDCGKH 135
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
LV L V V L+ A ++D+++ A+ S EI +D LS R+
Sbjct: 136 KLVELTVTERSGLVWLHPTPGA--SIDLDASLGADM----SDEIAGFK-LD-ELSLHSRK 187
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL----QLDSYSTSLYEKVSIQRCESGST 263
T+ NWK+ YL+ YHVP HK + + L+ +++ +
Sbjct: 188 VSTLNANWKLLLKTYLE-RYHVPILHKNTIGPVFEKGVIAHVEHGLHIRIAAAKTNLMDA 246
Query: 264 EGTDDT--HRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF---LDGS 318
D L +++ ++PN + + + N P+AP + D D +
Sbjct: 247 ASADPQSWRILDYASVFYTLFPNTFLINHANIVSLNSFYPIAPDKTIWTHDMLYREADYA 306
Query: 319 LKDDKAFIEQSLKDSEQV-QMEDIILCEGVQRGLESPA 355
++ +A + Q + + V ED + EGVQ GL A
Sbjct: 307 GEEGQATLAQRFGNIDAVFHREDFGIVEGVQAGLRCGA 344
>gi|119473755|ref|XP_001258753.1| Rieske [2Fe-2S] domain protein [Neosartorya fischeri NRRL 181]
gi|119406906|gb|EAW16856.1| Rieske [2Fe-2S] domain protein [Neosartorya fischeri NRRL 181]
Length = 412
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 145/356 (40%), Gaps = 18/356 (5%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P E P+SWY P LE +F + W +V + + P DF FV+
Sbjct: 20 KLPDEPPKALPASWYYSPEIYQLERRAIFSKKWILVTHKLRFTKPGDFLRFEEAGFSFVL 79
Query: 84 CRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
C D G ++ FHN+CRH A +++ G C YHGW+Y L+G L KA + + F
Sbjct: 80 CLDREGNLNGFHNICRHRAYPLISEHEGNVKILSCKYHGWSYSLNGKLAKAPKFDVVPGF 139
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSL 201
+ L P+ V T +G V+ + + V E G D +
Sbjct: 140 QKENQSLFPVHVHTDA------LGFIWVNLDSSPNPVPWEEDFDGVDRQERFQRFDFTQY 193
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
+ + + NWK DNY + YH AH +A L SY ++ IQ
Sbjct: 194 KFDHTWQMAGDYNWKTLADNY-NECYHCTVAHPDVAKLADL-SYYYTVSTPGHIQHFSRP 251
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
+ D+ + S + +PN + + +P + T C + ++ + D
Sbjct: 252 KPDKVDEDIQNAS----TYYFPNACMTVSPHFFYMMRCVPTSATSCSMEYEVYRHIEASD 307
Query: 322 -DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
D +I+ K +V ED LC QR L + + +G+ P +E F + +
Sbjct: 308 EDFEYIDSFFK---RVLDEDKHLCNAAQRNLNAGVFVNGQLHPDLESAPLFFQNTV 360
>gi|384917401|ref|ZP_10017525.1| Rieske (2Fe-2S) domain-containing protein [Citreicella sp. 357]
gi|384468727|gb|EIE53148.1| Rieske (2Fe-2S) domain-containing protein [Citreicella sp. 357]
Length = 374
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 150/383 (39%), Gaps = 47/383 (12%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N P E A P S YT FL LE VF SW G + LK+ D+ + I
Sbjct: 13 NVATPFEAAQAMPVSVYTSKDFLDLEQQHVFGASWLCAGRAESLKESGDYMTMEIAGEPI 72
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+V RD G + A NVCRH S L G G VCPYH WTY LDG L A + +
Sbjct: 73 MVLRDRAGDLRAMSNVCRHRMSTLLEGRGHVRSIVCPYHAWTYNLDGALRGAPAMDLNQS 132
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F + GL + W ++++ + + E ++ +D +
Sbjct: 133 FCKEATGLPQVRCVNWKGWIMVTLDPDLPEPAE------------------TLKEMDDLV 174
Query: 202 SYL--------CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ-------LDSYS 246
YL R E+ + NWK+ +N+++ YH+P H G G +S
Sbjct: 175 GYLPMENYVETFREEHRWDTNWKILAENFME-SYHLPVCHGGTIGGAVDLRRMTCPQGFS 233
Query: 247 TSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAF---IYPNFMINRYGPWMDTNLVIPLA 303
+ + + S D+T G + IYP+ MI + ++P
Sbjct: 234 GFNFHHILKDDSIALSIAHRDNTALQGEDRYRTWLLAIYPSLMITLTPGYFWYLSLMPDG 293
Query: 304 PTRCKVVF------DYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYC 357
P K+++ D+ D + ++ L D V ED E V +G++S
Sbjct: 294 PGGVKILYGGGLSPDFIADADAEQHFTALKGLLDD---VNDEDRGCTERVWKGMQSRHAV 350
Query: 358 SGRYAPSVEQTMYHFHSLLHCNL 380
G + +E+ Y F + + L
Sbjct: 351 PGALS-HLERPNYEFATWIASRL 372
>gi|126726592|ref|ZP_01742432.1| Rieske 2Fe-2S domain protein [Rhodobacterales bacterium HTCC2150]
gi|126703921|gb|EBA03014.1| Rieske 2Fe-2S domain protein [Rhodobacterales bacterium HTCC2150]
Length = 377
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 13/216 (6%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E+A P + YT P FLA E+ VF + W VG L + D+ + + +V R
Sbjct: 14 PFEQARAMPPAVYTSPDFLAREISDVFAQDWFCVGRASALPNAGDYVTHELAGQPIMVIR 73
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
++G +HA NVC H S L G G VCPYH WTY LDGTL A +T ++F
Sbjct: 74 RNDGTLHAQSNVCLHRMSTLLQGRGTTRSIVCPYHAWTYNLDGTLRGAPAMTLNENFCKD 133
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYL 204
+ L ++ W +V +++ +A + + +V E L I+G D S +
Sbjct: 134 AYKLPKVKCQEWLGWVFVSLNADAPNVADQLKDV---EGL--------IDGYDMESYTET 182
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ + NWKV +N+++ YH+P H G GL
Sbjct: 183 FFETHVWDTNWKVLAENFME-SYHLPVCHAGTIGGL 217
>gi|399076286|ref|ZP_10751939.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037619|gb|EJL30804.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 394
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 158/371 (42%), Gaps = 39/371 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E A P YTDP F E+ +V R W G DQ+ +P D+F+ R + ++ R
Sbjct: 35 PFEIARVLPPRCYTDPDFHRFEVEKVLTREWIYAGRVDQVANPGDYFTLRRFDETVIIMR 94
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK--KSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
D G I AF CRH +A+G+G K FVCPYHGW Y DGTL A + + ++
Sbjct: 95 DHKGGIKAFSAACRHRGYPVASGAGNCGKKGFVCPYHGWRYRTDGTLAAAPYMQ--EGYS 152
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ L V W FV N ++A E + L +L G+ +S+
Sbjct: 153 PEGESLPEFAVDVWQGFVFFNFDRDA---EPLSPR------LKTLDAVLEPFGL-ASMKC 202
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS-------IQ 256
RE NWK DN+ + YH PY H + +YE V +
Sbjct: 203 STMREKAWPGNWKATLDNFTE-AYHQPYVHPTTFEPMA--PARKGIYEDVDGPYNLFWLP 259
Query: 257 RCESGSTEG-TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL-----APTRCKVV 310
+ GS + D L + AFI N + + +D V+ L + R
Sbjct: 260 APDGGSIDTFFDPVPGLPERHANAFIVVN-VFPMFHMLIDPCSVVILDMDVHSVDRLTAR 318
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQM-----EDIILCEGVQRGLESPAYCSGRYAPSV 365
+D + + D F +++D+ + ED + CE V++G S G Y+ +
Sbjct: 319 WDILVTEASYDRPDF--AAVRDAYTAALVPTWDEDELACETVRQGQSSRFAEQGNYS-WM 375
Query: 366 EQTMYHFHSLL 376
E++++ FH+ L
Sbjct: 376 EKSVHQFHTWL 386
>gi|242810316|ref|XP_002485557.1| monoxygenase, putative [Talaromyces stipitatus ATCC 10500]
gi|218716182|gb|EED15604.1| monoxygenase, putative [Talaromyces stipitatus ATCC 10500]
Length = 845
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 32/351 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY + LE +F + W ++ ++ + DF S + F + +D +G I+
Sbjct: 458 PASWYRSEAMYHLERRAIFSKHWILLTHSSRFTKQGDFLSFTVANYSFFLIKDRDGSING 517
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN+CRH A I+ T SG S C YHGW+YGL G L KA R + +F+ + L+P+
Sbjct: 518 FHNICRHRAFPIVQTRSGSTSILSCKYHGWSYGLKGNLSKAPRFETVPEFDKSQHELLPI 577
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR--EYT 210
V + N G V+ + + +V + E + D + Y +
Sbjct: 578 HVH------IDNAGFIWVNLQAGEPDVKWEDEFQRIDEQPRMQDFDFAGDYTYDHYWDME 631
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
+E NWK +NY + YH +H ++ L Y T G + H
Sbjct: 632 LEANWKGVIENY-NECYHCATSHPLISQVSDLPRYRVE-------------PTAGYMEHH 677
Query: 271 RLGSKAIYA-------FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
+ I A + +P + G + +IP++ T+ K+ + + + DK
Sbjct: 678 IFNKEQIDAQFKRAITYFFPTTSVTVTGKFFYIQRMIPVSATKSKIENEVYRHKN-ATDK 736
Query: 324 AFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
F E + QV ED LC G Q L + +G P+ E+ +F +
Sbjct: 737 EFDEINTF-YRQVLEEDKELCVGAQSNLGGGVFVNGELHPNKEKGPIYFQN 786
>gi|323528117|ref|YP_004230269.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323385119|gb|ADX57209.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 378
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 152/373 (40%), Gaps = 31/373 (8%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P A P YT FL E +F R WQ VG LK D+ + RIG VV R
Sbjct: 20 PFSDARAMPPGVYTSAEFLKREERDIFQREWQCVGRASALKAAGDYLTARIGTQPVVVLR 79
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D+ + A NVC H S+L G G VCPYH W Y LDG L A + + F +
Sbjct: 80 DEQMHLRAMSNVCLHRMSMLLEGRGNVRRIVCPYHAWNYSLDGALKGAPLMDRQEGFCKE 139
Query: 146 EFGLVPLEVATWGPFVLLNMGKEA--VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ L + W ++ + + ++A VHQ+ L S ++ G+ +
Sbjct: 140 RYKLPAVRCEEWQGWIYVTLDQDAQPVHQQ-----------LAELSPLIDAYGMTGYIET 188
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ----LDSYSTSLYEKVSIQ 256
E+ + NWK+ +N+++ YH+P H+ G S L+ ++ Y ++ +
Sbjct: 189 FY-EEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMECPPGHAAFNYHWITKE 246
Query: 257 RCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
D+T G + A+ A IYP +I + ++ P R + F
Sbjct: 247 ASLPIGNAHPDNTRLTGHWRKTTALLA-IYPTHLITLTPGYFWYLVLQPQGVGRVHIRFG 305
Query: 313 YFLDGSLKDD---KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
L D A + K ++V ED E V RG+ +P G + +E+
Sbjct: 306 GGLSPEFIADPKANAHMATLKKLLDEVNAEDRRGVEAVFRGVHAPLAKPGHLS-HLERPN 364
Query: 370 YHFHSLLHCNLTN 382
Y F L L +
Sbjct: 365 YDFARYLASKLNS 377
>gi|209515307|ref|ZP_03264174.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
gi|209504288|gb|EEA04277.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
Length = 383
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 153/373 (41%), Gaps = 35/373 (9%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N + P A P YT +FLALE VF W VG L D+ + +IG+
Sbjct: 21 NCERPFGDARAMPPGVYTSEAFLALEQRDVFRNEWLCVGRASALAQTGDYLTAQIGDQPV 80
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
VV R+ +G + AF NVC H S+L G G VCPYH W Y LDG+L A +
Sbjct: 81 VVLRESSGTLRAFSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYALDGSLAGAPLMDRQPG 140
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F ++ L + TW ++ + + H V + L + ++ G+ +
Sbjct: 141 FRKDQYALPAVRCETWQGWIYVTLND---HAPAVSTQ------LAELASLIEPYGMTDYV 191
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ----------LDSYSTS 248
E+ NWK+ +N+++ YH+P H+ G S L+ + + +
Sbjct: 192 ETF-HEEHLWNTNWKILAENFME-SYHLPMLHRATVGPHSKLEEMECPPGRPAFNYHWIT 249
Query: 249 LYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+ I +T + H + A+ A IYP ++ + ++ P +R
Sbjct: 250 KEATLPIGNAHPANTR--LEGHWRRTTALLA-IYPTHLVTLTPGYFWYLILQPQGVSRVH 306
Query: 309 VVFDYFLDGSLKDDKAFIE-----QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
+ F L DD E ++L D V ED E V RG+ +P G +P
Sbjct: 307 IHFGGGLAPEFIDDPKAAEYMGTLKALLDD--VNAEDRRGVEAVFRGVHAPLAKPGHLSP 364
Query: 364 SVEQTMYHFHSLL 376
+E+ Y F L
Sbjct: 365 -LERPNYDFARYL 376
>gi|448317879|ref|ZP_21507423.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Natronococcus jeotgali DSM 18795]
gi|445601716|gb|ELY55701.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Natronococcus jeotgali DSM 18795]
Length = 363
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 149/337 (44%), Gaps = 46/337 (13%)
Query: 39 TDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVC 98
T P L E VF R W VG+ D + +P FF+ +G+ + +V R + ++ AF NVC
Sbjct: 29 TGPGSLEREKEAVFGRYWVYVGHADSIPEPGQFFTRNVGDRQLIVVRGHDDEVKAFDNVC 88
Query: 99 RHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL-----------LKATRITG-IKD 141
H S + T G CPYH WTY LDG L L +G +++
Sbjct: 89 AHRGSKMVEDTPMTDPGGGGRIQCPYHLWTYDLDGDLRSTPKSFEDASLNPDLDSGEVQE 148
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F+ + GL + V T GP V N+G D E +G +++ L ++
Sbjct: 149 FDCEANGLNDVRVDTVGPLVFANLG---------DDPPSLAEQVGAAADRLESLPLE-EY 198
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
+ R +ECNWK+F + DG + L +D + +++R G
Sbjct: 199 EHGRRIVSEVECNWKLFAAVHFDGS-----EERDADGTLAVDDHG------WTVERAADG 247
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYG--PWMDTNLVIPLAPTRCKVVFD-YFLDGS 318
+G++D G +A + + +PN I+ Y T + P+ P R +++ D YF DG
Sbjct: 248 --DGSEDRRPDGLEAQFHYCWPNVAIDVYEDVDGYATVALDPVGPDRVQLIADYYFRDGD 305
Query: 319 LKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPA 355
L + + + ++ + Q + ED E + GLE A
Sbjct: 306 LSEAEREL---VRTTRQRRAEDAERAERRRTGLEGGA 339
>gi|159128427|gb|EDP53542.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Aspergillus fumigatus A1163]
Length = 674
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 147/360 (40%), Gaps = 18/360 (5%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P E P+SWY P LE +F + W +V + + P DF FV+
Sbjct: 40 ELPDEPPKALPASWYYSPEIYQLERRAIFSKRWILVTHKLRFTKPGDFLRFEEAGFSFVL 99
Query: 84 CRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
C D G ++ FHN+CRH A +++ G C YHGW+Y L+G L KA + + F
Sbjct: 100 CLDREGNLNGFHNICRHRAYPLVSEDEGNVKILSCKYHGWSYSLNGKLAKAPKFEVVPGF 159
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSL 201
+ L P+ V T +G V+ + + V E G D +
Sbjct: 160 QKENQSLFPVHVHTDA------LGFIWVNLDSSPNPVPWEEDFDGVDRQERFQRFDFTQY 213
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
+ + T + NWK DNY + YH AH +A L SY ++ IQ
Sbjct: 214 KFDHTWQMTGDYNWKTLADNY-NECYHCTIAHPDVARLADL-SYYYTVSTPGHIQHFSRP 271
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
+ D+ + S + +PN + + +P + T C + ++ + D
Sbjct: 272 KPDKVDEDIQNAS----TYYFPNACMTVSPHFFYMMRCVPTSATSCSMEYEVYRHIEASD 327
Query: 322 -DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
D +I+ K +V ED LC Q+ L + + +G+ P +E F + + L
Sbjct: 328 EDFEYIDSFFK---RVLDEDKHLCNAAQKNLNAGVFVNGQLHPDLESAPLFFQNTVRSLL 384
>gi|407708960|ref|YP_006792824.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
gi|407237643|gb|AFT87841.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 378
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 152/373 (40%), Gaps = 31/373 (8%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P A P YT FL E +F R WQ VG LK D+ + RIG VV R
Sbjct: 20 PFSDARAMPPGVYTSAEFLKREERDIFQREWQCVGRASALKAAGDYLTARIGTQPVVVLR 79
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D+ + A NVC H S+L G G VCPYH W Y LDG L A + + F +
Sbjct: 80 DEQMHLRAMSNVCLHRMSMLLEGRGNVRHIVCPYHAWNYSLDGALKGAPLMDRQEGFCKE 139
Query: 146 EFGLVPLEVATWGPFVLLNMGKEA--VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ L + W ++ + + ++A VHQ+ L S ++ G+ +
Sbjct: 140 RYRLPAVRCEEWQGWIYVTLDQDAQPVHQQ-----------LAELSPLIDAYGMTGYIET 188
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ----LDSYSTSLYEKVSIQ 256
E+ + NWK+ +N+++ YH+P H+ G S L+ ++ Y ++ +
Sbjct: 189 FY-EEHVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMECPPGHAAFNYHWITKE 246
Query: 257 RCESGSTEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
D+T G + A+ A IYP +I + ++ P R + F
Sbjct: 247 ASLPIGNAHPDNTRLTGHWRKTTALLA-IYPTHLITLTPGYFWYLVLQPQGVGRVHIRFG 305
Query: 313 YFLDGSLKDD---KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
L D A + K ++V ED E V RG+ +P G + +E+
Sbjct: 306 GGLSPEFIADPKANAHMATLKKLLDEVNAEDRRGVEAVFRGVHAPLAKPGHLS-HLERPN 364
Query: 370 YHFHSLLHCNLTN 382
Y F L L +
Sbjct: 365 YDFARYLASKLNS 377
>gi|154251440|ref|YP_001412264.1| Rieske (2Fe-2S) domain-containing protein [Parvibaculum
lavamentivorans DS-1]
gi|154155390|gb|ABS62607.1| Rieske (2Fe-2S) domain protein [Parvibaculum lavamentivorans DS-1]
Length = 394
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG-RIGEVEFVVCR 85
+ +A T P + YTD F E +F R W VG D +K+P D+F+ IGE +V R
Sbjct: 21 VTEAETLPPACYTDEEFFEFEKEALFNREWLCVGRVDWVKNPGDYFTATHIGE-PLIVSR 79
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
G++ A VC+H A ++A G G FVCPYH WTYGLDG L+ A ++ DF+
Sbjct: 80 TREGELKAMSAVCQHRAMLVAEGRGNTKAFVCPYHHWTYGLDGRLVGAPAMSKTCDFDRN 139
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ GL ++ W FV +N ++A L SE L+ + ++ +
Sbjct: 140 DVGLPEIKTEVWEGFVFVNFDEDA---------PPLTPRLKTVSEALANYDLPNAEGAVP 190
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKG 235
+ NWKV +N D GYH HKG
Sbjct: 191 DEPQSYPWNWKVMMENNND-GYHATRLHKG 219
>gi|70985863|ref|XP_748437.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Aspergillus fumigatus Af293]
gi|66846066|gb|EAL86399.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Aspergillus fumigatus Af293]
Length = 674
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 147/360 (40%), Gaps = 18/360 (5%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P E P+SWY P LE +F + W +V + + P DF FV+
Sbjct: 40 ELPDEPPKALPASWYYSPEIYQLERRAIFSKRWILVTHKLRFTKPGDFLRFEEAGFSFVL 99
Query: 84 CRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
C D G ++ FHN+CRH A +++ G C YHGW+Y L+G L KA + + F
Sbjct: 100 CLDREGNLNGFHNICRHRAYPLVSEDEGNVKILSCKYHGWSYSLNGKLAKAPKFEVVPGF 159
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSL 201
+ L P+ V T +G V+ + + V E G D +
Sbjct: 160 QKENQSLFPVHVHTDA------LGFIWVNLDSSPNPVPWEEDFDGVDRQERFQRFDFTQY 213
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
+ + T + NWK DNY + YH AH +A L SY ++ IQ
Sbjct: 214 KFDHTWQMTGDYNWKTLADNY-NECYHCTIAHPDVARLADL-SYYYTVSTPGHIQHFSRP 271
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
+ D+ + S + +PN + + +P + T C + ++ + D
Sbjct: 272 KPDKVDEDIQNAS----TYYFPNACMTVSPHFFYMMRCVPTSATSCSMEYEVYRHIEASD 327
Query: 322 -DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
D +I+ K +V ED LC Q+ L + + +G+ P +E F + + L
Sbjct: 328 EDFEYIDSFFK---RVLDEDKHLCNAAQKNLNAGVFVNGQLHPDLESAPLFFQNTVRSLL 384
>gi|399907979|ref|ZP_10776531.1| Rieske (2Fe-2S) domain-containing protein [Halomonas sp. KM-1]
Length = 428
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 160/383 (41%), Gaps = 56/383 (14%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P ++Y D AL++ +F + W G T ++ ++ + ++G+ ++ R D
Sbjct: 28 ERNFSLPQAFYNDARLFALDMQEIFGKEWLFAGMTCEIPAKGNYMTLQVGDNPVILVRGD 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G IHAFHNVCRH S L + GK + VCPYH WTY LDG LL A G ++F++
Sbjct: 88 GGSIHAFHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGSDMG-ENFDLSA 146
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
+GL P+ V T G F+ +++ ++ +D ++ E E+ +L
Sbjct: 147 YGLKPIHVRTGGGFIFISLAEQP---PALDDFLLTLEHYLEPYEM-------GNLKVAVE 196
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-----DSYSTSLYEKVSIQRCE-- 259
+ NWK+ +N + YH +H L + LQ D +T Y+ + Q+
Sbjct: 197 SNIVEQANWKLVLENNRE-CYHCNGSHPELLNSLQEFDDTDDPRATPAYKALVAQKQSDW 255
Query: 260 ------------------------SGSTEGTDDTHRLGSKAIYAFIYPNF-------MIN 288
G T D SK + P+ + N
Sbjct: 256 DEQQIPWQLKRFGKRNRLTRTPLLDGVVSMTMDGKPACSKLMGRLTSPDMGSLRILHLPN 315
Query: 289 RYGPWMDTNL----VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIIL 343
+ +M + V+PL P V + + + + + ++ + +D L
Sbjct: 316 SWNHFMGDHAIVFRVLPLGPQETLVTTKWLVHKDAVEGVDYKPEEMRRVWDATNAQDKRL 375
Query: 344 CEGVQRGLESPAYCSGRYAPSVE 366
E QRG+ S AY G Y+ + E
Sbjct: 376 AEENQRGINSKAYQPGPYSETYE 398
>gi|326388409|ref|ZP_08210005.1| Rieske 2Fe-2S domain protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326207141|gb|EGD57962.1| Rieske 2Fe-2S domain protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 382
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P ++YT P FLALE R+F W +G D+ D D+ + + + ++ RD G I
Sbjct: 30 PGAFYTSPQFLALEEDRLFRDGWLCLGRVDETPDAGDYRTMTVLDEPLLIVRDGEGTIRV 89
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
NVCRH A+++A GSG F CPYH WTY DG+L+ A + + F+ L
Sbjct: 90 LSNVCRHRAALVAQGSGNAPAFSCPYHAWTYRHDGSLIGAPMMRQVAGFDRAACALPEFR 149
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
W F+ +N+ EA +A + L G IL N ++ + E
Sbjct: 150 SEIWAGFLFVNLSGEA--------GPLAPD-LAGLDPILR-NYHPEAMRHAAVVEERWGT 199
Query: 214 NWKVFCDNYLDGGYHVPYAHK 234
NWK +N+++ GYH+ H+
Sbjct: 200 NWKSLFENFME-GYHLSVVHE 219
>gi|300711408|ref|YP_003737222.1| putative dioxygenase subunit alpha YeaW [Halalkalicoccus jeotgali
B3]
gi|299125091|gb|ADJ15430.1| putative dioxygenase alpha subunit YeaW [Halalkalicoccus jeotgali
B3]
Length = 330
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 151/341 (44%), Gaps = 44/341 (12%)
Query: 59 VGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILA-----TGSGKKS 113
G+ +++P D+F+ IG + V+ RD + +I AF+NVC H S + T G +
Sbjct: 3 AGHATTIEEPGDYFTRTIGGKQIVIVRDKDREIRAFYNVCAHRGSKMVEDTPMTDPGNTN 62
Query: 114 WFVCPYHGWTYGLDGTLLK-------ATRITGIKDFNVKEF-----GLVPLEVATWGPFV 161
CPYH WTY LDG L A ++D +V E GL+ + + + GP V
Sbjct: 63 GIRCPYHLWTYDLDGRLRSTPQSFETAGMNRDLEDEDVPELDPKRNGLMEVHLDSIGPLV 122
Query: 162 LLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT--IECNWKVFC 219
+N D E G E L ++ Y R Y +ECNWK F
Sbjct: 123 FVNF---------ADDPAPLAEQAGTLKEELESFPLE---EYELARRYVSEVECNWKTFS 170
Query: 220 DNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD-DTHRLGSKAIY 278
NY + H H+ G+ L + + + EG + D + +A +
Sbjct: 171 GNYSECD-HCQANHQDWIKGISLAESELVVDDHYWV--LHYTHDEGVEADEALVEGEARF 227
Query: 279 AFIYPNFMINRYG--PWMDTNLVIPLAPTRCKVVFD-YFLDGSLKDDKA-FIEQSLKDSE 334
+ +PNF +N YG T ++ P+ R +++ D YF D L D++A F++ S K
Sbjct: 228 YYFWPNFTLNMYGNADGYGTYIIDPIDEGRFQLIADYYFRDEELSDEEAEFVQLSRK--- 284
Query: 335 QVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
+Q ED L E GL+S A G+ P+ E T++ H L
Sbjct: 285 -LQEEDFELVERQYEGLKSGALAQGQLGPN-EHTVHRLHRL 323
>gi|271965316|ref|YP_003339512.1| Rieske (2Fe-2S) protein [Streptosporangium roseum DSM 43021]
gi|270508491|gb|ACZ86769.1| Rieske (2Fe-2S) protein [Streptosporangium roseum DSM 43021]
Length = 374
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 156/365 (42%), Gaps = 20/365 (5%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P +Y D ALE +F W +L P F + ++G ++
Sbjct: 4 LPPSLISTLPGGYYADEGVFALEQAEIFESMWFCAVRAAELDRPGAFRTVQVGRESVLLT 63
Query: 85 RDDNGKIHAFHNVCRHHASILAT-GSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R +G I AF NVCRH S L T SG+ K+ F CPYH WTY L+G L+ A +T +
Sbjct: 64 RSRDGSIRAFLNVCRHRGSRLRTEESGQVKNAFSCPYHAWTYDLEGRLIAAPNLTRMPGL 123
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQE-EVDSNVVANEWLGGSSEILSINGIDSSL 201
+ +GLV + V W + + + + E +V VV G+ E + GID L
Sbjct: 124 DRSGYGLVNVHVREWLGYAWVCLADDPPSFEADVVGEVVTRL---GAEEPIRNYGID-EL 179
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSIQRCE 259
+ R Y ++ NWK+ +N+++ YH H L L D Y+ + + E
Sbjct: 180 AVGRRIVYDVKANWKLVVENFME-CYHCATIHPELTEVLPEFADGYAAQSFVGHGAEFGE 238
Query: 260 SG---STEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ +G++ R+ + YA + P IN + + + PLA R V
Sbjct: 239 EVRGFTVDGSEGVDRIPGVSEDQDRRYYAITVKPQVFINLVPDHVIIHRMFPLAAGRTIV 298
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
D+ + + S++ +V ++D CE Q + S AY G E +
Sbjct: 299 ECDWLFREDVVGRGTDLGPSVELFHRVNLQDFDACERCQPAMGSRAYARGGVLVPSEHHI 358
Query: 370 YHFHS 374
FH+
Sbjct: 359 GEFHA 363
>gi|334140627|ref|YP_004533829.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp.
PP1Y]
gi|333938653|emb|CCA92011.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp.
PP1Y]
Length = 404
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 149/359 (41%), Gaps = 40/359 (11%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A T P + YT F E+ +F W VG + L +P DFF+ + +V + +
Sbjct: 21 EADTLPPACYTSEEFFHFEMDAIFQHEWLCVGREEWLGEPGDFFTVTRADEPIIVSKTRD 80
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
G I A VC+H A ++A G G FVCPYH WTY LDGTL+ A ++ +F+ K
Sbjct: 81 GSIKALSAVCQHRAMLVAEGQGNARAFVCPYHHWTYDLDGTLVGAPAMSRTCNFDKKAAA 140
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + TW F+ +N+ EA E + + A E + + + S+ G
Sbjct: 141 LPEIRHETWHGFIFINLDPEA---EPLTPRLAALEPVVANYDFASLRGPRPE------EP 191
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
NWKV +N D GYH H G D + L + +G
Sbjct: 192 TVFPWNWKVMLENNND-GYHASRLHAGPLH----DFIPSGLASFPEVPENSAGYYRLNGT 246
Query: 269 THRLGS-----KAIYAFIYPNFMINRYGPWMDTNL-----VIPLAPTRCKVVFDYFLDGS 318
HR + ++++ ++P + NL ++ L T ++ D GS
Sbjct: 247 LHRNAAFNATQRSVFP-VFPKLTEEEQNRLLFVNLPPSLSLVVLNDTVLYLIMDPRSAGS 305
Query: 319 ------------LKDDKAF-IEQSLKDS--EQVQMEDIILCEGVQRGLESPAYCSGRYA 362
DD F ++ + D E++ +D + E VQ+GL S GRY+
Sbjct: 306 HALTIGTLMVPEAMDDPLFDLKMKMNDQAVEEIVAQDFHVDELVQQGLRSKHAPRGRYS 364
>gi|167042029|gb|ABZ06765.1| putative Rieske [2Fe-2S] domain protein [uncultured marine
microorganism HF4000_141F21]
Length = 398
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 167/390 (42%), Gaps = 49/390 (12%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
+PI KA P+ Y + + +E ++F W V+G + +P D + + + ++
Sbjct: 24 NLPISKAHGLPNECYNNIEYSIIERKKLFEDKWVVIGVASSVPNPGDAKTFDLLGIPLII 83
Query: 84 CRDDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R+ +I +HNVC H IL K+ CPYH W+Y LDGTL+ + G+
Sbjct: 84 LRNKKKQIKVYHNVCSHRGYKILQKSCKIKNVLRCPYHSWSYDLDGTLVSTPHLGGMNKH 143
Query: 143 NVKEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSIN 195
+ F GL + W +++N+ V E+ + N++ + L +
Sbjct: 144 EAEGFDKSSSGLKEVRSYVWLDMIVVNISNNEVPFEQYIKPLSDRWNKFWPEKDQKLIKH 203
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
D L Y + +CNWK +NY + YH+P+ H +L+ YS + + I
Sbjct: 204 PKD--LGYF---QLKAKCNWKFAIENYCE-SYHLPWVHP------ELNKYS-KINDHYHI 250
Query: 256 QRCESG-STEGT-----------------DDTHRLGSKAIYAFIYPNFMINRYGPWMDTN 297
Q + + +GT + + + A Y ++PN M+ G D
Sbjct: 251 QGLPNRFAGQGTVVYKPKFKGKKKFPCFPNWSKDKVNVAEYVALFPNVML---GIHKDHY 307
Query: 298 LVIPLAPTRCKVVFD----YFLDGSLKDDKAFI---EQSLKDSEQVQMEDIILCEGVQRG 350
L P + Y++ + F +Q+LK +VQ +D+ + EG+Q G
Sbjct: 308 YAYWLEPVNHSYTIEHMEIYYVGNEAANSNKFKPLRKQNLKLWSRVQSQDVSIIEGMQEG 367
Query: 351 LESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
SPAY G ++P ++ +HFH + NL
Sbjct: 368 RNSPAYNGGNFSPIMDNPTHHFHKWVVTNL 397
>gi|186686515|ref|YP_001869711.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186468967|gb|ACC84768.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 367
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 147/356 (41%), Gaps = 31/356 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y A E ++ +WQ VG L +P D+ + ++G+ V RD+NG +
Sbjct: 24 PGGYYFSEQIFAYEQQTIWRNTWQFVGRESDLPNPGDYLTCQVGDQPMFVIRDNNGILRG 83
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HNVC H + + G G CPYHGW + +G L R + + L
Sbjct: 84 MHNVCPHRGAQMLQGQGHCQRVRCPYHGWNFNYEGNLKGLPRAECFPNLDKSAVYLAKGR 143
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEIL-SINGIDSSLSYLCRREYTIE 212
V TWG F+ VH E ++V+ +L G S L L + Y
Sbjct: 144 VETWGGFIF-------VHSEAEGESLVS--YLAGFSAYLEQYQHRWQELQQVDHWFYEEP 194
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD---- 268
NWK +NYL+ YH+ H A L+ +Y R TDD
Sbjct: 195 ANWKFPIENYLE-CYHLSVVH---AQSLKCFDPKNIIYTPTG--RHYQIFVPFTDDEFVK 248
Query: 269 -----THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK 323
+ ++ FI+PN MIN + + PL+PT+ K F+ F+ + +
Sbjct: 249 DHPAFSGEPRGQSYQGFIFPNMMINTARDKVSVFRLTPLSPTKTK--FEVFIYQTKAQIE 306
Query: 324 AFI---EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
AF ++ + E+V ED + +Q + S AY + A +E + HFH +L
Sbjct: 307 AFPYKQDEFRPEFERVLNEDFGVVRSLQASVHSKAYGVLQLA-DIEYGISHFHQVL 361
>gi|325003689|ref|ZP_08124801.1| Rieske (2Fe-2S) region [Pseudonocardia sp. P1]
Length = 440
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 163/387 (42%), Gaps = 45/387 (11%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P+E A T YT P+F ALE +VF W VG+ ++ + VV
Sbjct: 39 RLPVELASTLLPDAYTSPAFFALEQEKVFASGWVAVGFVADVETAGACVVVDVAGRSVVV 98
Query: 84 CRDDNGKIHAFHNVCRHHASIL----ATGSGKKSWFVCPYHGWTYGLDGTLLKAT----- 134
R+ +G++ FHNVCRH A+ L A G++ CPYH WTY DGT L
Sbjct: 99 TRNRHGELRGFHNVCRHRATKLLDAGAREVGRRGRIRCPYHNWTYDTDGTCLGTPLFEGS 158
Query: 135 ----------RITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW 184
+G K F+ ++GL+P+ V WG + +N+ + +
Sbjct: 159 DVPPGQEAVFDTSGAKGFDRADYGLLPVSVEAWGFLLFVNLAPDPAP---------LRDH 209
Query: 185 LGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-D 243
LG + + + + R Y + N+K+ +N+++ YH+P+ H L Q+ D
Sbjct: 210 LGDLPRRFADHRL-QDWTPQRRSSYDVAANYKLVGENFME-YYHLPWVHPELNQVSQVSD 267
Query: 244 SYS-------TSLYEKVSIQRCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGP 292
Y T + + E+G +G LG + + +++P+ +
Sbjct: 268 HYRWQGPGRYTGMCTTPVSRNTEAGGWDGLAPLSTLGPQDREAGRFVWLFPSCALVVLPN 327
Query: 293 WMDTNLVIPLAPTR---CKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQR 349
L P+A R V+ + + ++Q K + V +D+ + E VQ
Sbjct: 328 HAFVLLNRPVAADRTIETAVLLTHPESTGSPGLQEGLDQLEKFWDLVNRQDVEIVERVQE 387
Query: 350 GLESPAYCSGRYAPSVEQTMYHFHSLL 376
G+ PAY GR E+ ++ F +++
Sbjct: 388 GMADPAYRGGRMCFRFEEPLHRFQNMV 414
>gi|29833491|ref|NP_828125.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Streptomyces avermitilis MA-4680]
gi|29610614|dbj|BAC74660.1| putative ring-hydroxylating dioxygenase [Streptomyces avermitilis
MA-4680]
Length = 382
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 18/366 (4%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P T P +YTDP E +F W L P F + ++G ++
Sbjct: 12 LPPSLLATLPGHYYTDPEIFRQEQADLFESMWFCAVRGADLGRPGAFRTVQVGRENVLIT 71
Query: 85 RDDNGKIHAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R G++ AF N+CRH + L T SG+ + CPYH WTY LDG L+ A + + D
Sbjct: 72 RSRTGELRAFLNICRHRGARLCTEESGEVRRNLQCPYHAWTYDLDGKLVAAPNLVRMPDV 131
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ E+GLV + + W + + + E EE A E LG ++ I +L+
Sbjct: 132 DRVEYGLVKVALREWLGYAWVCLADEPPSFEETVMG-AAVERLGDAAAIEHYG--TENLA 188
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSI---QR 257
R Y + NWK+ +N+++ YH H L L + Y+ Y Q
Sbjct: 189 LGKRITYDVRANWKLIVENFME-CYHCATIHPELTDVLPEFAEGYAAQYYVGHGAEFGQD 247
Query: 258 CESGSTEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
+ + +G++ +L + + YA + P IN + + + PLA R V
Sbjct: 248 VKGFTVDGSEGFAKLPAVDDDQDRRYYAITVKPTVFINLVPDHVILHRMFPLAEDRTIVE 307
Query: 311 FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
D+ + + A + +S++ +V ++D CE Q + S AY G E +
Sbjct: 308 CDWLYAPEVVESGADVSKSVELFHRVNVQDFDACERTQPAMASRAYRKGGVLVPTEHHIG 367
Query: 371 HFHSLL 376
FH L
Sbjct: 368 IFHEWL 373
>gi|254463131|ref|ZP_05076547.1| rieske 2Fe-2S domain protein [Rhodobacterales bacterium HTCC2083]
gi|206679720|gb|EDZ44207.1| rieske 2Fe-2S domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 379
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 153/374 (40%), Gaps = 44/374 (11%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N P E A P YT F LEL +F + W VG D L + D+ + +
Sbjct: 15 NAAQPFESARAMPPEVYTTQEFADLELESIFAKDWFCVGRADGLANAGDYTTCELAGQPV 74
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD 141
+V RD G + NVC H S L G G VCPYH WTY LDG+L A ++ +
Sbjct: 75 LVMRDGQGTLRGLSNVCLHRMSTLLHGRGNARSIVCPYHAWTYNLDGSLRGAPAMSLNEG 134
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SS 200
F ++ L + W +V + + + D VA E LG E+ I G D ++
Sbjct: 135 FCKDQYKLPKVRCEEWLGWVFITLNE--------DVPAVA-EQLGEVEEM--IAGYDMTN 183
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL-QLD-----------SYSTS 248
+ + E+ + NWKV +N+++ YH+P H G GL +L+ +Y T
Sbjct: 184 YTEVFYEEHVWDTNWKVLAENFME-SYHLPVCHAGTIGGLSKLEDMVCPPGLTAFNYHTI 242
Query: 249 LY-EKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
L E + I +T D R IYP+ +I + + P P +
Sbjct: 243 LKDETLRIAMAHDTNTRLRGDERR---TTFLLAIYPSLLITLTPGYFWYLSLHPKGPGQV 299
Query: 308 KVVFDYFLDGSLKDD---KAFIEQSLKD----SEQVQMEDIILCE----GVQRGLESPAY 356
+ F G + DD A Q+ D + V +ED E G+ GL P +
Sbjct: 300 HIRF----GGGMSDDYSEDADASQNFTDLKALLDDVNIEDRGCTEKVFNGLSSGLAKPGH 355
Query: 357 CSGRYAPSVEQTMY 370
S P+ + Y
Sbjct: 356 LSHLERPNYDFAQY 369
>gi|294812675|ref|ZP_06771318.1| Putative ring-hydroxylating dioxygenase [Streptomyces clavuligerus
ATCC 27064]
gi|326441171|ref|ZP_08215905.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Streptomyces clavuligerus ATCC 27064]
gi|294325274|gb|EFG06917.1| Putative ring-hydroxylating dioxygenase [Streptomyces clavuligerus
ATCC 27064]
Length = 393
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 148/357 (41%), Gaps = 18/357 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P + Y+ P A E VF W V + +L P DF + +G +V R+ G++
Sbjct: 34 TLPGAAYSSPEIFAREQEAVFENLWCCVLRSAELAAPGDFRTVTVGRESVLVLRNTAGEL 93
Query: 92 HAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AF NVC H + L G SG + C YH W+Y LDGTL+ A + + D + +GL
Sbjct: 94 RAFLNVCSHRGTRLCAGESGTVRRTLRCSYHAWSYDLDGTLVAAPNLARMPDLDRTAYGL 153
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
P+ + W + L + +E +E A E LG + I + L + R Y
Sbjct: 154 RPVALREWLGYTWLCLAEEPPSFDE-HVRGAATERLGDPAAIDRYDAEGLMLGHRVR--Y 210
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST-----E 264
+ NWK+ +N+++ YH H L + L + KV +G+ +
Sbjct: 211 DVRANWKLLVENFME-CYHCSTIHPELVAVLPEFGGGYAAQTKVGQGASFAGAARGFTVD 269
Query: 265 GTDDTHRLGSKA-------IYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
G RL A + P IN + + + P A R V D+
Sbjct: 270 GGPGFERLPGLAEEQDRRYFAITVRPQVFINLVPDHVILHRMFPHAHDRTVVECDWLYAP 329
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ A + S++ +V +D +CE Q G+ S AY +G E + FH+
Sbjct: 330 DVVASGADLSHSVELFHRVNEQDFAVCERTQPGMASRAYRAGGVLVPAEHHIGEFHA 386
>gi|351066270|gb|AEQ39134.1| Rieske 2Fe-2S family protein [Oceanimonas doudoroffii]
Length = 364
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 146/355 (41%), Gaps = 20/355 (5%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL P +Y DP+ E + +WQ G+ Q+ + D+F I RD G
Sbjct: 10 ALEP--KYYNDPAIYEKEKQTLLATTWQFAGHISQIPNKGDYFRLEIAGESLFCVRDRKG 67
Query: 90 KIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
I F+NVC+H I+ SG VCPYH W Y L G L + ++ + +
Sbjct: 68 DIRTFYNVCQHRGHEIVQNESGNTRMLVCPYHTWGYDLTGQLRNGPNLDSVRGLDKGKIC 127
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + + F+ +N+ A +EV + G E+ L L E
Sbjct: 128 LPQVSTEIFCGFIFVNLDPNAKPMDEV--------FPGVRDELREYVPHIDELKPLEFVE 179
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASG-LQLDSYST-----SLYEKVSIQRCESGS 262
CNWKV +NY + YH HK G ++ ++Y+ +L Q E +
Sbjct: 180 IFENCNWKVSVENYSE-CYHCGANHKTFVDGVIKPETYNVKHVGHTLQHTTECQNLERMT 238
Query: 263 TEGTDDTHRLGSKAIYAFIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
++ ++ F++P F Y G ++T P+A + V ++ G +
Sbjct: 239 YPVDPTSNAYATRYKSWFLWPGFSFQVYPGNVLNTYHWRPVAVDKVLVYRGWYTIGGEES 298
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
D + + +D + ED++L E VQRGL S Y G E+ + HSL+
Sbjct: 299 D-VIRQLAKQDHDTTVAEDLVLVESVQRGLNSRGYRGGPLVVDPEEGVMSEHSLV 352
>gi|386838920|ref|YP_006243978.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374099221|gb|AEY88105.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451792212|gb|AGF62261.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 381
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 152/360 (42%), Gaps = 20/360 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P +YTDP E +VF W L P F + ++G V+ R G++
Sbjct: 18 TLPGHYYTDPEVFRQEQEKVFESLWFCAVRGADLDKPGAFRTVQVGRENVVITRTRAGEL 77
Query: 92 HAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF NVCRH + L T G ++S CPYH WTY LDG L+ A + + D + E+G
Sbjct: 78 RAFLNVCRHRGARLCTEESGEVRRS-LQCPYHAWTYDLDGRLIAAPNLIKMPDVDRVEYG 136
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L+ + + W + + + E E+ + A E LG ++ I L+ R
Sbjct: 137 LIKVALREWLGYAWVCLADEPPSFEDTVVH-AAVERLGDAAAIEHYG--TERLTLGRRVT 193
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYEKVSI---QRCESGST 263
Y + NWK+ +N+++ YH H L L D Y+ Y + + +
Sbjct: 194 YDVRANWKLIVENFME-CYHCATIHPELTEVLPEFADGYAAQYYVGHGAEFGEEIKGFTV 252
Query: 264 EGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD 316
+G+ +L + YA + P +N + + + PLA R V D+
Sbjct: 253 DGSAGFAKLPEVTADQDRRYYAITVKPTVFVNLVPDHVILHRMFPLAEDRTVVECDWLYA 312
Query: 317 GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ A + +S++ +V ++D CE Q + S AY G E + FH+ L
Sbjct: 313 PEVVASGADVSKSVELFHRVNVQDFEACERTQPAMSSRAYRRGGVLVPNEHHIGIFHTWL 372
>gi|302904521|ref|XP_003049081.1| hypothetical protein NECHADRAFT_94939 [Nectria haematococca mpVI
77-13-4]
gi|256730016|gb|EEU43368.1| hypothetical protein NECHADRAFT_94939 [Nectria haematococca mpVI
77-13-4]
Length = 393
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 149/357 (41%), Gaps = 24/357 (6%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P + P+SWY +P+ LE ++ + W +V + + DF F +C
Sbjct: 11 PADVPRALPASWYREPAMYELERRAIYSKRWLLVTHRSRFSKSGDFVQYNEAGFSFFLCL 70
Query: 86 DDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D G ++ FHN+CRH A ++ G S C YHGW+YGL G L KA R ++ F+
Sbjct: 71 DREGNLNGFHNICRHRAYPVVTKDEGNVSILSCKYHGWSYGLSGKLAKAPRFEKMETFDK 130
Query: 145 KEFGLVPLEV-ATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
L + V FV +N+ K +V + LG I +++
Sbjct: 131 DANSLFKVHVHIDKRGFVWVNLDGGDKPSVPWKSDFDGADTQPRLG----IFNMDDYTFD 186
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
++ +Y NWK DNY + YH AH G+A+ L +Y KV + +
Sbjct: 187 HAWDMDGDY----NWKTLVDNY-NECYHCSVAHPGIAATSNLTTY------KVETKGGQI 235
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLK 320
G + F +PN + + V+P + T + ++ +
Sbjct: 236 QHFVEDKKGKESGLEPAPTFFFPNASVTMTTKYFYLMRVVPTSATTTSMQYEVYRHKDAT 295
Query: 321 DDKAFIEQSLKD-SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
D++ +++ D +QV+ ED LC Q+ L + Y SG E+ + +F +L
Sbjct: 296 DEEF---KAVDDFFKQVESEDKGLCNAAQKNLNAGVYVSGDLNSFNEKGVLYFQKIL 349
>gi|377807880|ref|YP_004979072.1| putative iron-sulfur Rieske protein [Burkholderia sp. YI23]
gi|357939077|gb|AET92634.1| putative iron-sulfur Rieske protein [Burkholderia sp. YI23]
Length = 382
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 150/367 (40%), Gaps = 37/367 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P YT FL+LE +F + WQ VG L P D+ + I VV RD+ + A
Sbjct: 32 PPGVYTSAEFLSLEEREIFSKEWQCVGRASSLGKPGDYLTASIANQPIVVLRDEQMGLRA 91
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
NVC H S+L G G +CPYH W YGLDG L A + F + + L +
Sbjct: 92 MSNVCLHRMSVLLEGRGNIRRIICPYHAWNYGLDGGLKGAPLMEQQSGFCKESYKLPAVR 151
Query: 154 VATWGPFVLLNMGKEA--VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
W ++ + + ++A VHQ+ L SE++ G+ + E+
Sbjct: 152 CEEWQGWIYVTLDQKAQPVHQQ-----------LAQLSELIDAYGMTDYIETF-HEEHVW 199
Query: 212 ECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ----LDSYSTSLYEKVSIQRCESGSTE 264
+ NWK+ +N+++ YH+P H+ G S L+ Y Y ++ +
Sbjct: 200 DTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMECPPGYPAFNYHWITKEASLPIGNA 258
Query: 265 GTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF------DYF 314
D+ G + A+ A IYP +I + ++ P R + F ++
Sbjct: 259 HPDNNRLTGHWRKTTALLA-IYPTHLITLTPGYFWYLVLQPRGVGRVHIRFGGGLAPEFI 317
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
D A ++ L ++V ED E V RG+ +P G + +E+ Y F
Sbjct: 318 ADPEANAHMATLKTLL---DEVNAEDKRGVEAVFRGVNAPLAKPGHLS-HLERPNYDFAR 373
Query: 375 LLHCNLT 381
L L
Sbjct: 374 YLASKLA 380
>gi|254440554|ref|ZP_05054048.1| Rieske (2Fe-2S) domain protein [Octadecabacter antarcticus 307]
gi|198256000|gb|EDY80314.1| Rieske (2Fe-2S) domain protein [Octadecabacter antarcticus 307]
Length = 402
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 161/379 (42%), Gaps = 35/379 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P++ YTDP E V + SW + + + D + ++ R
Sbjct: 29 PVSTANGLPNAHYTDPDVFKSESRAVLHASWAGLAVGADVPENGDAKPLEFLGIPLLLLR 88
Query: 86 DDNGKIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITG----IK 140
D +G + F N+CRH IL T + CPYH W Y GTL+ + G
Sbjct: 89 DKDGDVRVFQNICRHRGMILVDTPRRIEGAIRCPYHSWCYSTKGTLVSTPHVGGPGHNTH 148
Query: 141 DFNVKE-FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
D VKE GL+ + W V +N+ A E V+++++A W ++ I G DS
Sbjct: 149 DAIVKEDLGLIEVRSHIWRDLVFINLDGTADGFEVVNADLIA-RWHEHTAPIYH-GGADS 206
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
+ + + CNWK+ +NY + YH+P+ H GL S +L+ + + + +S
Sbjct: 207 TFA------LDVACNWKLAVENYAE-SYHLPWIHPGLNSYSRLEDH-YHIEQPISSSGTG 258
Query: 260 SGSTEGT--------DD----------THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
+ S +GT DD + + A Y +YPN ++ L+ P
Sbjct: 259 AFSGQGTLVYRQLTGDDGAIFPDFAGLSDKWDEGAEYICLYPNVLLAAQREHAYAILLEP 318
Query: 302 LAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
A T + + S D A + + + EDI + EG+Q+G + + GR+
Sbjct: 319 TA-TNHTIEHVHIYYASPDTDAALRATNTAQWKDIFKEDIGVVEGMQKGRAAIGFDGGRF 377
Query: 362 APSVEQTMYHFHSLLHCNL 380
+P ++ + FH + +
Sbjct: 378 SPVMDSPTHCFHDWVAAKM 396
>gi|295689198|ref|YP_003592891.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter segnis ATCC
21756]
gi|295431101|gb|ADG10273.1| Rieske (2Fe-2S) iron-sulfur domain protein [Caulobacter segnis ATCC
21756]
Length = 407
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 151/361 (41%), Gaps = 40/361 (11%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+E A T P + Y D F E +F W VG D +K+P DFF+ RI +V R+
Sbjct: 23 VETAETLPPACYVDADFYEFEKEALFNHEWLCVGRVDWVKEPGDFFTTRIIGEPIIVTRN 82
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ +I A VC+H A ++A G G FVCPYH W Y L+G L+ A + +F+ K
Sbjct: 83 RDNQIKAMSAVCQHRAMLVAEGRGNTRGFVCPYHHWVYSLNGDLVNAPAMERTCEFDKKA 142
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L +V W F+ +N EA + + E + ++ + +G+ ++
Sbjct: 143 IKLPTFKVEVWLGFIFINFDAEA---PPLAPRLTTVEAAVANYDLSNADGLSPPMT---- 195
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKG------------LASGLQLDS----YSTSLY 250
NWKV +N D GYH H+G + D+ Y+ +L+
Sbjct: 196 --GQFAWNWKVMFENNND-GYHASKLHRGPLHDFIPSELCSFPEAGEGDAGFLRYNGTLH 252
Query: 251 EKVSIQRCESGSTEGTDD-THRLGSKAIYAFIYPNFMINRYGPWMDTNLVI-----PLAP 304
S + + T ++A +A I P + M +++VI P P
Sbjct: 253 RDASFNPTQKAVLPVFPNLTDEDRNRATFANIPPTLSLV-----MTSDMVIYLILRPTGP 307
Query: 305 TRCKVVFDYFLDGSLKDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ + + F +E + + ++ +D+ + E VQ+GL S GRY
Sbjct: 308 ETMEQDTGILVAPGATESPGFEERLEMIMTSAGKIIAQDMHVDELVQQGLRSRFAIRGRY 367
Query: 362 A 362
+
Sbjct: 368 S 368
>gi|126740740|ref|ZP_01756426.1| Rieske 2Fe-2S domain protein [Roseobacter sp. SK209-2-6]
gi|126718255|gb|EBA14971.1| Rieske 2Fe-2S domain protein [Roseobacter sp. SK209-2-6]
Length = 376
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 151/370 (40%), Gaps = 40/370 (10%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P ++ + P ++YT E V W +G D++ +P D+F+ ++ + +V
Sbjct: 14 LPADRPMGMPGAYYTSQEQFEWEKSTVLRHGWHALGRCDEIPEPGDYFTVQLLDEPLIVV 73
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R D+G+I NVCRH LA G G FVC YH W YG DG LL+A R+ F+
Sbjct: 74 RGDDGQIRVLANVCRHRGMPLAEGRGNAKRFVCSYHAWMYGRDGALLRAARMDNAA-FDS 132
Query: 145 KEFGLVPLEVATWGPFVLLNM-GKEAVHQEE---VDSNVVANEWLGGSSEILSINGIDSS 200
K L + W F+ N+ G A EE +D + E S
Sbjct: 133 KNCRLHGHNIQIWNGFIYCNLDGDAAPFGEESAPLDQMLAPYE--------------PES 178
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAH---------KGLA----SGLQLDSYST 247
+ E NWK +N+++ GYH+ H GLA SG SY
Sbjct: 179 FRLVHVAEENWHTNWKCLVENFME-GYHLSVVHPRTLHGYTPTGLARKSVSGPGFTSYCA 237
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
+ + + G D R S F P + ++ + + + P++
Sbjct: 238 NYPDDIP---SRGDGAPGLSDAERQRSSLFARF--PTQVTSQAASLLVSICIFPISADLI 292
Query: 308 KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP-SVE 366
+V + + G D+ IE +K E+V ED E +Q L+S +G AP E
Sbjct: 293 RVKWTMSVYGDDLSDET-IEARIKLWEEVNKEDREKLERMQIALKSQHAHAGPLAPDDYE 351
Query: 367 QTMYHFHSLL 376
T+ F + L
Sbjct: 352 GTIRDFQTWL 361
>gi|415909389|ref|ZP_11553127.1| Large subunit of ring-hydroxylating dioxygenase [Herbaspirillum
frisingense GSF30]
gi|407762599|gb|EKF71418.1| Large subunit of ring-hydroxylating dioxygenase [Herbaspirillum
frisingense GSF30]
Length = 428
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
++ A+ P+ YTDP+ E+ ++FY++W VG+ ++K+P DF + +IG +V RD
Sbjct: 20 VQDAMVDPA-LYTDPAIFEAEMDKIFYKTWIWVGHESEIKNPGDFKTAQIGRQPVIVVRD 78
Query: 87 DNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
GKI+ N CRH A++ G + F CPYH W+Y LDG L G +D K
Sbjct: 79 KTGKINVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYALDGKLRGLPYPEGYEDVIEK 138
Query: 146 -EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVV--ANEWLGGSSEILSINGIDSSLS 202
+ L L V ++ + + +E E S+ + A +W+ ++ G +
Sbjct: 139 ADLPLQSLRVDSYNGMIFASFNQEV----EPLSDFLGHAKKWI----DLFMKQGAGFPIK 190
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+++ + NWK+ +N D GYH P HK S +
Sbjct: 191 VQGEHKFSFKGNWKIQLENTTD-GYHFPVVHKTFLSSV 227
>gi|389746484|gb|EIM87664.1| Rieske domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 412
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 153/366 (41%), Gaps = 33/366 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PSSWY + LE +F + W + +T++ ++ +D G+I+A
Sbjct: 15 PSSWYRSDAIYQLERRAIFSKKWLFLCHTNRFTKTGEYIKFAFAGYNIFAIKDREGQINA 74
Query: 94 FHNVCRHHASILA---------------TGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
FHNVCRH A + T SG+ + C +HGW+Y + G L KA
Sbjct: 75 FHNVCRHRAFPVVGTNAKRIKENLPDPLTESGQVAVLHCKFHGWSYTMKGDLAKAPGFDE 134
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
+++F+ K+ L + + +G V+ + + + E G + G D
Sbjct: 135 VENFDPKKNSLFGIRTH------IDQLGYLYVNLDTSEDYIKWEEQFGDVDSQPRVQGFD 188
Query: 199 SSLSYLCRREYTIEC---NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI 255
+S Y ++ E NWK DNY + YH AH G+AS + L +Y +K +
Sbjct: 189 TS-KYKYAFSWSFENCQYNWKTLVDNY-NECYHCKVAHPGIASTVDLKTYYVQG-QKGYV 245
Query: 256 QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD-YF 314
E + + + F++P I + T V+P+ R ++ +D Y
Sbjct: 246 AHFSPPKPENKEK--EVDGSIVATFLFPFASITLMPAYAYTMRVVPIDAHRTEMQYDVYR 303
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+G+ +D Q QV+ ED LC Q+ +E+ Y +G E + HF S
Sbjct: 304 PEGASDEDFDSTHQFFL---QVEEEDKFLCTNAQKNMEAGIYQTGSLHTRQEHGVLHFQS 360
Query: 375 LLHCNL 380
L+ +L
Sbjct: 361 LVKESL 366
>gi|441202700|ref|ZP_20971554.1| rieske 2Fe-2S domain protein [Mycobacterium smegmatis MKD8]
gi|440630262|gb|ELQ92036.1| rieske 2Fe-2S domain protein [Mycobacterium smegmatis MKD8]
Length = 382
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 157/360 (43%), Gaps = 38/360 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP+ A E +F W G+ L+ P + G ++ R ++ ++ A
Sbjct: 29 PREAYVDPAVFAWEQQAIF-SGWTCAGHAADLEAPGAQRAVGSGANGVLLVRGEDNRMRA 87
Query: 94 FHNVCRH--HASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
F N CRH H + S K+ VCPYH W+Y LDG++ A ++ F+ FGLV
Sbjct: 88 FANACRHRNHELLSCGASAKRRSIVCPYHAWSYRLDGSVRNAPGFKDVEGFDPDAFGLVE 147
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
L + W ++ ++ + D++ + + G +++S + L+ + R Y +
Sbjct: 148 LRLVDWHGWLFVDPSGQ-------DADFTTH--VAGLEDVVSPYHPE-DLTIVARHSYEL 197
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLA------SGLQLDSYSTSLYEKVSI-QRCESGSTE 264
NWK+ +NY + YH H L+ SG L+ + + +SI E+ S +
Sbjct: 198 AANWKIIAENYQE-CYHCSSIHPELSRISPPTSGENLELPGSWMGGWMSIVDGAETMSLD 256
Query: 265 GTD--------DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTR----CKVVFD 312
G H L +Y YPN +++ + ++ T+L+ PLA R C F
Sbjct: 257 GRSGGVAIAGLSEHEL-RTVMYLVGYPNLLVSLHPDYVMTHLMTPLAVDRTHVECAWAFP 315
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
G D A+ ++ + +D CE VQRGL SP G AP E +Y F
Sbjct: 316 REAVGRPGFDPAY---AVDFWDLTNRQDWAACESVQRGLSSPHARPGPLAPD-EDGVYQF 371
>gi|126726393|ref|ZP_01742234.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2150]
gi|126704256|gb|EBA03348.1| Rieske (2Fe-2S) protein [Rhodobacteraceae bacterium HTCC2150]
Length = 382
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 160/384 (41%), Gaps = 47/384 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+++A P++ Y DP E H +F+ +W + + + D + + ++ R
Sbjct: 11 PLDQANGLPNAHYIDPQVHEEEKHALFFANWAALDVASAVPENGDAKPIELLGIPLLLLR 70
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D G + F N+CRH IL K + CPYH W Y G L+ + G + NV
Sbjct: 71 DREGVVRVFQNICRHRGMILVQEPSKIEGAIRCPYHSWCYSTQGKLVSTPHVGGPGN-NV 129
Query: 145 ------KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVAN-------EWLGGSSEI 191
E GL+ + W V +N+ A E V+++++ + GG S
Sbjct: 130 HPAIVRSELGLLEVRSHIWRDIVFVNIDGAADPFEMVNADLIQRWAEFDQPHYHGGGSSG 189
Query: 192 LSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLY 250
+++ + CNWK+ +NY + YH+P+ H GL S +L D Y
Sbjct: 190 FTLD---------------VNCNWKLAVENYCE-SYHLPWIHPGLNSYSRLEDHYHIEKQ 233
Query: 251 EKVSIQ------RCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGPWMDTNLVI 300
+ S Q + E E D L K A Y ++PN ++ D I
Sbjct: 234 GEYSGQGTLVYRQLEGDQGEKFPDFSNLSDKWNEGAEYVSLFPNVLL---AAQRDHGYAI 290
Query: 301 PLAPTRCKVVFD--YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCS 358
L PT + + S D+ E + + V EDI + EG+Q+G +P +
Sbjct: 291 ILEPTSQGTTVEHVHLYYSSTDTDQKLRETNADLWKGVFEEDIFVVEGMQKGRHTPGFDG 350
Query: 359 GRYAPSVEQTMYHFHSLLHCNLTN 382
GR++P+++ + FH + + N
Sbjct: 351 GRFSPAMDGPTHIFHDWVAGKIEN 374
>gi|429334572|ref|ZP_19215226.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida CSV86]
gi|428760643|gb|EKX82903.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida CSV86]
Length = 428
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ +F + IG+ +V R
Sbjct: 27 ERTFSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNFLTLEIGKNPIMVVRGA 86
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G++HAFHNVCRH S L T GK + VCPYH WTY LDG LL A G DF++K+
Sbjct: 87 EGQVHAFHNVCRHRGSRLCTSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKQ 145
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 146 YGLKPVHVKVAGGYIFISLAE 166
>gi|399994905|ref|YP_006575137.1| dioxygenase [Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
gi|398659453|gb|AFO93418.1| putative dioxygenase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 384
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 156/371 (42%), Gaps = 35/371 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P+ Y DP E V + +W +G+ + +P D + ++ R
Sbjct: 13 PVNTANGLPNEHYVDPRVFDEEKKSVLFANWSGIGFGKDIPEPGDAKPVDFLGMPLLLVR 72
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
D G+I F N CRH IL K + CPYH W YGL+G L + G
Sbjct: 73 DRTGEIGVFQNTCRHRGMILVDKPQKIRGAIRCPYHSWCYGLNGALRTTPHVGGPGQNTH 132
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+D ++ + GL+ + W + +N+ +A + ++ W + I G S
Sbjct: 133 EDVDMDKLGLIRIRSHIWRDVIFVNVDGQAPDFATAHAGLL-ERWQEFETPIHH-GGEGS 190
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVS---- 254
SL + + NWK+ +NY + YH+P+ H GL S +L D Y+ + S
Sbjct: 191 SL------KLEVATNWKLAVENYCE-SYHLPWVHPGLNSYSRLEDHYNIEERGQYSGQGT 243
Query: 255 ---IQRCESGSTEGTDDTHRLGS---KAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
Q + G ++ D G A Y +YPN ++ G D + I L P C
Sbjct: 244 LVYRQLTDEGGSKLPDFAGLSGQWDEGAEYIAVYPNVLL---GVQRDHSFAIVLEPKACG 300
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQM------EDIILCEGVQRGLESPAYCSGRYA 362
++ + ++ E + Q+ ED+ + EG+Q+G + GR++
Sbjct: 301 HTVEHIELYYAQSERDTPELDGLRASNAQLWKTVFEEDVFVVEGMQKGRHGILFDGGRFS 360
Query: 363 PSVEQTMYHFH 373
P+++ ++FH
Sbjct: 361 PAMDGPTHNFH 371
>gi|254777625|ref|ZP_05219141.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 448
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y P+F ALE+ R++ R WQ+ D + P D+F R G ++ R D+G + A
Sbjct: 28 PAERYYSPAFAALEVERMWPRVWQLACMVDHVAAPSDYFEYRCGPYGVLIVRGDDGALRA 87
Query: 94 FHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F NVCRH + L +GSG C YHGWT+ L G L + G + ++ L+P
Sbjct: 88 FQNVCRHRGNSLCSGSGSGLRELKCRYHGWTWDLAGALKRVPDRKGFGSLRLSDYPLIPA 147
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V TW V +N+ +A+ E+L E ++ +D + C T+E
Sbjct: 148 RVDTWAGLVFVNLDPDAMPLP---------EYLEAIPEDIAWCRLD---EFRCYATLTVE 195
Query: 213 --CNWKVFCDNYLDGGYHVPYAHKGL 236
NWK D Y + YH+ H L
Sbjct: 196 VDANWKTIADGYSE-TYHIQTLHPEL 220
>gi|320102042|ref|YP_004177633.1| Rieske (2Fe-2S) domain-containing protein [Isosphaera pallida ATCC
43644]
gi|319749324|gb|ADV61084.1| Rieske (2Fe-2S) iron-sulfur domain protein [Isosphaera pallida ATCC
43644]
Length = 373
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 155/375 (41%), Gaps = 30/375 (8%)
Query: 18 VYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG 77
+YE P P A+ P+ YT+ S+ E F + W VG T L +P D+ I
Sbjct: 3 IYERPPMPP--DAVGLPARCYTELSWFLREREVFFGKGWVCVGRTHDLAEPGDYRLVEIA 60
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHAS-ILATGSGK-KSWFVCPYHGWTYGLDGTLLKATR 135
+V RD +G I AF NVCRH + +L G+ + CPYH WTY LDG+L A
Sbjct: 61 GESLIVLRDRDGLIRAFFNVCRHRGTRLLNEAEGRLGNTIQCPYHSWTYRLDGSLRAAPH 120
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ F + GL+ V W + +++ + E +V L E+
Sbjct: 121 MESSAAFQPENLGLIAAAVDEWDGHLFVSLEENPPPLAERLEGLVE---LARPYEM---- 173
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLA------SGLQLDSYSTSL 249
L R Y ++ NWK+ NY + H P H L SG + L
Sbjct: 174 ---GRLKRGARVVYEVKANWKLIIQNYSE-CLHCPANHPALKKVTHYLSGDNGPARPGFL 229
Query: 250 YEKVS-IQRCESGSTEGTDDT------HRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL 302
+ + E+ S G T RL +K + + PN ++ M T+L+ P
Sbjct: 230 GGSMDLLDGVETMSATGKRRTLHPNLPERLHTKCQFYAVLPNLLLTLQPDSMMTHLLWPR 289
Query: 303 APTRCKVVFDYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
P +V D+ D S + F ++ +Q ED L E Q G+ S AY G Y
Sbjct: 290 DPGHTTIVCDWHYDPSDLNQPDFDPSPEVELWDQTNREDWRLSELTQLGMASRAYRPGPY 349
Query: 362 APSVEQTMYHFHSLL 376
+ + E +Y F L+
Sbjct: 350 S-NREDLLYAFDRLV 363
>gi|339503160|ref|YP_004690580.1| aromatic-ring-hydroxylating dioxygenase [Roseobacter litoralis Och
149]
gi|338757153|gb|AEI93617.1| putative aromatic-ring-hydroxylating dioxygenase [Roseobacter
litoralis Och 149]
Length = 386
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 165/371 (44%), Gaps = 37/371 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PI +A P++ YTDP+ +E H + + W + + + D E+ ++ R
Sbjct: 14 PIAQANGLPNAHYTDPAVFNVEKHALLFEGWSGLAVAADVPETGDAVPLDFLEMPLLLIR 73
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKD--- 141
D K+ F N+CRH IL K + CPYH W Y +G L+ + G
Sbjct: 74 DRQNKVRVFQNICRHRGMILVDAPRKIEGAIRCPYHSWCYSTEGALVSTPHVGGPGQNTH 133
Query: 142 --FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+ GL+ + W V +N+ A + ++ ++A W + L G +S
Sbjct: 134 DGIDRALLGLIEVRSHIWMGVVWINVSGTAEDFDVANAKMMA-RWQ-EFDKPLHHGGTES 191
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL---------DSYS---T 247
+ + CNWK+ +NY + YH+P+ H GL S +L D++S T
Sbjct: 192 RFT------LEVNCNWKLAVENYCE-SYHLPWVHPGLNSYSRLEDHYHIEEDDAFSGQGT 244
Query: 248 SLYEKVSIQRCESGSTEGTDD-THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTR 306
+Y + I+ E G+ D + + + A Y +PN ++ G D I L P
Sbjct: 245 LVYRQ--IRDAEGGTFPDFDALSDKWDTAAEYITGFPNVLL---GVHRDHTFAIILQPVG 299
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDSEQ---VQMEDIILCEGVQRGLESPAYCSGRYAP 363
+ ++ + D + + ++++EQ V ED+ + EG+QRG + ++ GR++P
Sbjct: 300 PEKTLEHVHLFYARPDTSDTLR-IRNAEQWKTVFAEDVFVVEGMQRGRHAVSFDGGRFSP 358
Query: 364 SVEQTMYHFHS 374
+++ + FH+
Sbjct: 359 AMDGPTHLFHA 369
>gi|359400042|ref|ZP_09193035.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium
pentaromativorans US6-1]
gi|357598648|gb|EHJ60373.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium
pentaromativorans US6-1]
Length = 404
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 149/359 (41%), Gaps = 40/359 (11%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A T P + YT F E+ +F W VG + L +P DFF+ + +V + +
Sbjct: 21 EADTLPPACYTSEEFFHFEMDAIFQHEWLCVGREEWLGEPGDFFTVTRADEPIIVSKTRD 80
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
G + A VC+H A ++A G G FVCPYH WTY LDGTL+ A ++ +F+ K
Sbjct: 81 GSVKALSAVCQHRAMLVAEGQGNARAFVCPYHHWTYDLDGTLVGAPAMSRTCNFDKKAAA 140
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + TW F+ +N+ EA E + + A E + + + S+ G
Sbjct: 141 LPEIRHETWHGFIFVNLDPEA---EPLTPRLAALEPVVANYDFASLRGPRPE------EP 191
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
NWKV +N D GYH H G D + L + +G
Sbjct: 192 TVFPWNWKVMLENNND-GYHASRLHAGPLH----DFIPSGLASFPEVPENSAGYYRLNGT 246
Query: 269 THRLGS-----KAIYAFIYPNFMINRYGPWMDTNL-----VIPLAPTRCKVVFDYFLDGS 318
HR + ++++ ++P + NL ++ L T ++ D GS
Sbjct: 247 LHRNAAFNATQRSVFP-VFPKLTEEEQNRLLFVNLPPSLSLVVLNDTVLYLIMDPRSAGS 305
Query: 319 ------------LKDDKAF-IEQSLKDS--EQVQMEDIILCEGVQRGLESPAYCSGRYA 362
DD F ++ + D E++ +D + E VQ+GL S GRY+
Sbjct: 306 HALTIGTLLVPEAMDDPLFDLKMKMNDQAVEEIVAQDFHVDELVQQGLRSKHAPRGRYS 364
>gi|186470830|ref|YP_001862148.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184197139|gb|ACC75102.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 382
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 150/366 (40%), Gaps = 27/366 (7%)
Query: 29 KALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
+A + P YT FLA+E +F W VG L +P D+ + RI VV RD+
Sbjct: 27 EARSMPPGVYTSAEFLAMEERNIFAHEWLCVGRASALSEPGDYLTARIATQPIVVLRDEQ 86
Query: 89 GKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++ A NVC H S+L G G VCPYH W Y LDG L A + DF + +
Sbjct: 87 RQLKAMSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYSLDGALKGAPLMDRQADFCKESYR 146
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L + W ++ + + DS + L +E++ G+ + E
Sbjct: 147 LPAVRCEEWQGWIYVTLD---------DSAPPVHAQLAELNELIGAYGMSGYIETFY-EE 196
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQLDSYSTSL----YEKVSIQRCESG 261
+ + NWK+ +N+++ YH+P H+ G S L+ L Y ++ +
Sbjct: 197 HVWDTNWKILAENFME-SYHLPMLHRATVGPHSRLEEMECPPGLPAFNYHWITKEASLPI 255
Query: 262 STEGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
D+T G + A+ A IYP ++ + ++ P R + F L
Sbjct: 256 GNAHPDNTRLTGHWRKTTALLA-IYPTHLVTLTPGYFWYLVLQPEGVGRVHIRFGGGLAP 314
Query: 318 SLKDD---KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
D +A ++ K + V ED E V RG+ +P G + +E+ Y F
Sbjct: 315 EFIADPQAQAHMDTLKKLLDDVNAEDRRGVEAVFRGVHAPLAKPGHLS-HLERPNYDFAR 373
Query: 375 LLHCNL 380
L L
Sbjct: 374 YLAAKL 379
>gi|400760137|ref|YP_006589740.1| putative dioxygenase [Phaeobacter gallaeciensis 2.10]
gi|398655609|gb|AFO89578.1| putative dioxygenase [Phaeobacter gallaeciensis 2.10]
Length = 384
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 155/371 (41%), Gaps = 35/371 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P+ Y DP E V + +W +G+ + +P D + ++ R
Sbjct: 13 PVNTANGLPNEHYVDPRVFDEEKKSVLFANWSGIGFGKDIPEPGDAKPVDFLGMPLLLVR 72
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
D G+I F N CRH IL K + CPYH W YGL+G L + G
Sbjct: 73 DRTGEIGVFQNTCRHRGMILVDKPQKIRGAIRCPYHSWCYGLNGALRTTPHVGGPGQNTH 132
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+D ++ + GL+ + W + +N+ +A + ++ W + I G S
Sbjct: 133 EDVDMDKLGLIRIRSHIWRDVIFVNVDGQAPDFATAHAGLL-KRWQEFETPIHH-GGEGS 190
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVS---- 254
SL + + NWK+ +NY + YH+P+ H GL S +L D Y+ + S
Sbjct: 191 SL------KLEVATNWKLAVENYCE-SYHLPWVHPGLNSYSRLEDHYNIEERGQYSGQGT 243
Query: 255 ---IQRCESGSTEGTDDTHRLGS---KAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
Q + G + D G A Y +YPN ++ G D + I L P C
Sbjct: 244 LVYRQLTDEGGAKLPDFAGLSGQWDEGAEYIAVYPNVLL---GVQRDHSFAIVLEPKACG 300
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQM------EDIILCEGVQRGLESPAYCSGRYA 362
++ + ++ E + Q+ ED+ + EG+Q+G + GR++
Sbjct: 301 HTVEHIELYYAQSERDTPELDGLRASNAQLWKTVFEEDVFVVEGMQKGRHGILFDGGRFS 360
Query: 363 PSVEQTMYHFH 373
P+++ ++FH
Sbjct: 361 PAMDGPTHNFH 371
>gi|431800361|ref|YP_007227264.1| Rieske family iron-sulfur cluster-binding protein [Pseudomonas
putida HB3267]
gi|430791126|gb|AGA71321.1| Rieske family iron-sulfur cluster-binding protein [Pseudomonas
putida HB3267]
Length = 430
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G ++ +F + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGLVSEIPTKGNFLTLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L T GK + VCPYH WTY LDG LL A G DF++ +
Sbjct: 88 EGKVHAFHNVCRHRGSRLCTSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|85705253|ref|ZP_01036352.1| probable dioxygenase alpha chain [Roseovarius sp. 217]
gi|85670126|gb|EAQ24988.1| probable dioxygenase alpha chain [Roseovarius sp. 217]
Length = 385
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 158/373 (42%), Gaps = 33/373 (8%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N + P+E+A P++ Y DP+ A E H + + W + + +P D +
Sbjct: 9 NVRRPVEQANGLPNAHYIDPAVFAEEKHALLFSQWAGLAVGADVPEPGDAKPLEFLGMPL 68
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI- 139
++ RD +G++ F N+CRH IL K + CPYH W Y G L+ + G
Sbjct: 69 LLIRDKDGEVRVFQNICRHRGMILVEEPRKIEGAIRCPYHSWCYSTKGALVSTPHVGGPG 128
Query: 140 ----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ GL + W V +N+ +A E ++++A W +
Sbjct: 129 HNTHESIKRDALGLTEIRSHIWRDVVWINVSGDAPAFEVAMADLIAR-WREFDLPVYH-G 186
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY---------- 245
G DS + ++ NWK+ +NY + YH+P+ H GL S +L+ +
Sbjct: 187 GPDSRFTL------EVQTNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYHIEKPGEYS 239
Query: 246 --STSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
T +Y +++ + E+ + D + +A Y YPN ++ G D I L
Sbjct: 240 GQGTMVYRQITNENGET-FPDFADVGAKWNEQAEYIAAYPNVLL---GVHRDHAFAIILE 295
Query: 304 P--TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
P T V + D ++ + + V EDI + +G+QRG + + GR+
Sbjct: 296 PKGTERTVEHIHLYYAVPNADDGLRMRNTQLWKTVFEEDIFVVQGMQRGRHATYFDGGRF 355
Query: 362 APSVEQTMYHFHS 374
+P ++ + FH+
Sbjct: 356 SPVMDSPTHCFHA 368
>gi|167041579|gb|ABZ06327.1| putative Rieske [2Fe-2S] domain protein [uncultured marine
microorganism HF4000_008G09]
Length = 399
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 49/389 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PI +A P+ Y + +E ++F W V+G + +P D + + ++ R
Sbjct: 27 PIAEAHGLPNECYNSKEYTKIERKKLFEDKWAVIGVASSVPNPGDAKPFDLLGIPLIILR 86
Query: 86 DDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
+ KI +HNVC H IL K+ CPYH W+Y LDG L+ + G+
Sbjct: 87 NRKRKIKVYHNVCSHRGYKILQKKCSIKNVLRCPYHSWSYNLDGKLVATPNLGGMDKHEA 146
Query: 145 KEF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVD---SNVVANEWLGGSSEILSING 196
+ F GL + W V++N+ V ++ S+ + W +++ +
Sbjct: 147 EGFDKSSSGLKEVRSYVWLDMVVVNISNNEVSFDKYIKPLSDRWSKFWPKEDQKLIQHS- 205
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS--TSLYEKVS 254
L Y + +CNWK +NY + YH+P+ H +L++YS + Y
Sbjct: 206 --KDLGYF---KLKAKCNWKFAIENYCE-SYHLPWVHP------RLNTYSKISDHYHIQG 253
Query: 255 IQRCESGSTEGTDDTHRLGSK---------------AIYAFIYPNFMINRYGPWMDTNLV 299
+ +G + G K A Y ++PN M+ G D
Sbjct: 254 LPNRFAGQGTIVYNAQFKGKKKFPCFPNWSKDKKNIAEYVALFPNVML---GVHKDHYYA 310
Query: 300 IPLAPTRCKVVFD----YFLDGSLKDDKAFI---EQSLKDSEQVQMEDIILCEGVQRGLE 352
L P + Y++ + K F +Q+L VQ ED+ + EG+Q G
Sbjct: 311 YWLEPVNHAYTLEHMEIYYVGEEAANSKKFKLLRKQNLNLWRGVQSEDVHIIEGMQEGRN 370
Query: 353 SPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
SP+Y G ++P ++ +HFH + N+
Sbjct: 371 SPSYNGGNFSPVMDNPTHHFHKWVATNIV 399
>gi|56698497|ref|YP_168873.1| Rieske (2Fe-2S) domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680234|gb|AAV96900.1| Rieske 2Fe-2S domain protein [Ruegeria pomeroyi DSS-3]
Length = 369
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 154/370 (41%), Gaps = 42/370 (11%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P+++ + P ++YT E V W +G D++ +P DFF+ ++ +V
Sbjct: 14 LPVDRPMGMPGAFYTSQEQFEHEARTVLRTGWHCLGRVDEIPEPGDFFTAQLLNEPLLVV 73
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R D+ + NVCRH LA G G FVC YH W YG DG LL+A R+ F+
Sbjct: 74 RGDDQSVRVMANVCRHRGMPLAEGRGNTKRFVCSYHAWAYGRDGALLRAPRMEN-AGFDA 132
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQE--EVDSNVVANEWLGGSSEILSINGIDSSLS 202
K L V W F+ +N+ +A+ E E+D+ + E D L
Sbjct: 133 KSCKLPEHAVQLWNGFIYVNLTPDALPFEHPELDAMLAPYE------------TEDFHLV 180
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAH-------------KGLASGLQLDSYSTSL 249
++ ++ + NWK +N+++ GYH+ H + L SG SY+ +
Sbjct: 181 HVAEEDW--QTNWKCLVENFME-GYHLSVVHPQTLHGYTPSGLSRKLVSGDGFTSYAANY 237
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPT--RC 307
+ ++ R E G + R S F P + ++ + + + P+ + R
Sbjct: 238 PDNIT-PRGEGAL--GLSEPERKRSSLFAKF--PTQVASQAASLLVSLCIFPVNASLIRV 292
Query: 308 KVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP-SVE 366
K + D D I+Q + E+V ED E +Q L S G A E
Sbjct: 293 KWTMSVYRDNL---DHDTIQQRISLWEEVNREDREKLERMQVALRSAHAVEGPLAEDDFE 349
Query: 367 QTMYHFHSLL 376
T+ F + L
Sbjct: 350 GTIRDFQTWL 359
>gi|103488640|ref|YP_618201.1| Rieske (2Fe-2S) protein [Sphingopyxis alaskensis RB2256]
gi|98978717|gb|ABF54868.1| Rieske (2Fe-2S) region [Sphingopyxis alaskensis RB2256]
Length = 393
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 146/350 (41%), Gaps = 36/350 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y+DP F A+E+ R+F SWQVV + + +P D+ S ++ R + + A
Sbjct: 20 PAWTYSDPDFYAVEMARIFRPSWQVVCHDSDIANPGDWHSIDYCGESIILVRGTDRIVRA 79
Query: 94 FHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
F NVCRH S L A G KK VCPYH WTY LDG L + GLV
Sbjct: 80 FTNVCRHRGSRLVDGAAGCAKK--LVCPYHAWTYELDGRLTGVPDSASYPTLDKGRAGLV 137
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+E W F + + + V + E + E + +L + R
Sbjct: 138 GVEAEQWRGFWFVRLDDDG--GPSVADMMAPYE---TTVEPYRFEEL-GALGRVTLRPRA 191
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
+ NWK DNY D G H+P AH GL + L SY E+V + + +
Sbjct: 192 V--NWKNVGDNYSD-GLHIPVAHPGL-TRLFGKSYGVEARERVDRMWGDLVDRPSANWSE 247
Query: 271 RLGSKA---------------IYAFIYPNFMINRYGPWMDTNLVIPLAPTRC------KV 309
RL + +Y ++PN + Y +D +P PT C V
Sbjct: 248 RLYQRLLPPIPHLPADRQRHWLYFKLWPNVAFDIYPDQVDFMQWLPTGPTSCLIREISYV 307
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ D + + +A + + + QV ED L VQ+G++S ++ G
Sbjct: 308 LPDAYTGEWRHEMRAARYLNWRINRQVNAEDTALITRVQQGMQSQSFSMG 357
>gi|219849905|ref|YP_002464338.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus aggregans
DSM 9485]
gi|219544164|gb|ACL25902.1| Rieske (2Fe-2S) domain protein [Chloroflexus aggregans DSM 9485]
Length = 369
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 154/362 (42%), Gaps = 35/362 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
A T P +++ E R+F R+W VG ++ + + + ++ RD G
Sbjct: 13 AYTLPGYYFSATDIFIREQDRIFARTWVCVGRSEDVATAGAYCLIEVAGESLILLRDQTG 72
Query: 90 KIHAFHNVCRHHASILATG-SGKKS-WFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
++HA +NVCRH + L T G+ S VCPYH WTY LDGTL A + F +++
Sbjct: 73 QLHAHYNVCRHRGARLCTELQGQLSETIVCPYHAWTYRLDGTLATARYMQDAPGFRCEDW 132
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSINGIDSSLSYLC 205
L+ VA W FV +++ ++ V E + ++ W G L
Sbjct: 133 PLLSAAVAEWDGFVFVSLAEQPVAFERAFAPLIGKFQAWDPG------------RLRCGA 180
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAH-------------KGLASGLQLDSYSTSLYEK 252
+ Y + NWK+ NY + YH P H L SG L Y +E
Sbjct: 181 QIVYEVAANWKLIIANYSE-CYHCPLIHPELVAVSPWQSGRNDLTSGPFLGGYMDLKHES 239
Query: 253 VSIQ-RCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF 311
+++ G + R + Y I+PN +++ + ++ + +IP P +V
Sbjct: 240 MTLDGHTRRSPLPGLNAEDR--RRVYYYAIFPNLLLSLHPDYVMAHRLIPRRPDATTIVC 297
Query: 312 DYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
++ + F +++ + +D +CE Q+G+ S AY G YA S E ++
Sbjct: 298 SWYFAPEVMALPDFDPSDAVEFWDHTNRQDWRVCELSQQGVSSRAYRPGPYAQS-EGLLW 356
Query: 371 HF 372
F
Sbjct: 357 QF 358
>gi|417747106|ref|ZP_12395584.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium avium subsp. paratuberculosis S397]
gi|336461392|gb|EGO40263.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium avium subsp. paratuberculosis S397]
Length = 389
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 127/304 (41%), Gaps = 18/304 (5%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ L P +Y DP +E ++ R + + QL + D+ + +V RD
Sbjct: 32 ERELRVPLHYYRDPKITEIEEAQILRRVPLAIVPSAQLPNTNDYVVRSVLGDSLLVTRDR 91
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+G H N CRH ++ A GSG + FVCPYH WTY G L G N K++
Sbjct: 92 SGASHVLLNYCRHRGAMPACGSGNTARFVCPYHAWTYKNTGELFSVPGKAGFDSMNTKDY 151
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GLV L F+ + D+ + + LG L++ SS Y +R
Sbjct: 152 GLVELPSEERHGFICAVL--------TADATIDLDAHLGDFGAELALWNY-SSYGYHTQR 202
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAH-------KGLASGLQLDSYSTSLYEKVSIQRCES 260
E+T E +WK + + + GYH PY H LA+ + D + +
Sbjct: 203 EFTSEVSWKGALEAFAE-GYHFPYVHGQSLIGQNTLANTMVYDEFGKHHRIGFPFTWITN 261
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL-APTRCKVVFDYFLDGSL 319
+T+ L + + ++YPN ++ ++ ++P APTRC V +
Sbjct: 262 AATDPAASLEPLANMGVIYWVYPNLILANSPVGLEIIDMLPAGAPTRCTVRHSWMARVPA 321
Query: 320 KDDK 323
DD+
Sbjct: 322 ADDE 325
>gi|83951397|ref|ZP_00960129.1| Rieske 2Fe-2S domain protein [Roseovarius nubinhibens ISM]
gi|83836403|gb|EAP75700.1| Rieske 2Fe-2S domain protein [Roseovarius nubinhibens ISM]
Length = 350
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 148/355 (41%), Gaps = 34/355 (9%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++YT P A E V R W +G D++ +P DFF+ ++ +V R D+G+I A
Sbjct: 4 AFYTSPEQFAHEAATVLRRGWHCLGREDEIPEPGDFFTVQLLNEPLIVVRGDDGEIRALA 63
Query: 96 NVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
NVCRH LA G G F+C YH W YG DG LL+A R+ F+ K L +
Sbjct: 64 NVCRHRGMPLAEGRGNVKRFICSYHAWAYGRDGALLRAARMEN-AGFDAKSCRLHGHNLQ 122
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
W F+ +++ +A E + + + + ++ + E CNW
Sbjct: 123 LWNGFIYVSLDAKAAPFEHPELDALIAPYEPKKFRLVHVA------------EEDWHCNW 170
Query: 216 KVFCDNYLDGGYHVPYAH-------------KGLASGLQLDSYSTSLYEKVSIQRCESGS 262
K +N+++ GYH+ H + L +G SY+ + + + R
Sbjct: 171 KCLVENFME-GYHLSVVHPQTLHGYTPTGLARKLIAGEGYTSYAANYPDGIP-PRGMGAP 228
Query: 263 TEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDD 322
D+ R ++A +P + ++ + + + PL +V + G DD
Sbjct: 229 GLSRDEMMR---STLFA-KFPTQVASQAASLLVSLSIFPLDAGTIRVKWTMSTYGEDLDD 284
Query: 323 KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA-PSVEQTMYHFHSLL 376
A I +K E+V ED E +Q L S G A E T+ F S L
Sbjct: 285 -AVIAARIKLWEEVNAEDRAKLERMQVALASDHAGEGPLAGEDYEGTVRDFQSWL 338
>gi|433456510|ref|ZP_20414551.1| ring hydroxylating dioxygenase subunit [Arthrobacter
crystallopoietes BAB-32]
gi|432196183|gb|ELK52661.1| ring hydroxylating dioxygenase subunit [Arthrobacter
crystallopoietes BAB-32]
Length = 400
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 156/362 (43%), Gaps = 22/362 (6%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P YTD + E R+F + W + L + + +IG ++ R G+I
Sbjct: 13 TLPGHTYTDSAIFRAEQERIFEQMWFCAIRSSDLDKAGAWKTVQIGRESVLISRTRKGEI 72
Query: 92 HAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AF+N+CRH L +G +S F CPYH WTY +G L+ A +T + D + E+G
Sbjct: 73 RAFYNICRHRGVKLCMEESGEAARS-FQCPYHAWTYDFEGKLIAAPNLTKMPDIDRNEYG 131
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR- 207
L + + + +V + + +E E D E LG ++ +I+G D + + RR
Sbjct: 132 LAKVHIREYLGYVWVCLAEEP-PSFEADVMGAIEERLG---DLEAIDGYDVANLKVGRRI 187
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLDSYSTSLYE-KVSIQRCE 259
+Y ++ NWK+ +N+++ YH H L A GL + E I+
Sbjct: 188 KYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGLAAQYFVGHGAEFGDDIKGFT 246
Query: 260 SGSTEGTDDTHRLG---SKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL 315
+EG D +G + YA I P +N + + + PLA V D+
Sbjct: 247 IDGSEGLDVIPGVGDDQDRRYYAITIKPTVFVNLVPDHVIIHRMFPLAADHTIVECDWLY 306
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
++ + + S++ +V M+D CE Q + S Y G E + FH
Sbjct: 307 LPNVVESGKDVTASVELFHRVNMQDFDACERCQPAMASKVYSKGGVLVPSEHHISAFHEW 366
Query: 376 LH 377
+H
Sbjct: 367 VH 368
>gi|379754796|ref|YP_005343468.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-02]
gi|378805012|gb|AFC49147.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-02]
Length = 450
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE ++ R WQ+ +++ P DF I + +V R DN + A
Sbjct: 17 PKQRYYDPEFYALEAEMLWPRMWQMACRLEEIPKPGDFVEYEILDQSVIVARVDNHTVRA 76
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH L G+G + FVCP+HGW +GLDG T + ++ + + LVP
Sbjct: 77 YHNACRHRGVKLVEGNGNRRTFVCPFHGWCWGLDGHNTFVLRPEAFAEENLSADDLRLVP 136
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ WG +N+ +A +W+ + + +DS R E+
Sbjct: 137 VRCELWGGCAWINLDDDA---------PALRDWMEPFASVYDAWQVDS-----LRVEWWQ 182
Query: 212 EC----NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
C NWK+ +++ GYHVP H L Q + +++ V+
Sbjct: 183 SCRLPVNWKLAAAAFME-GYHVPQTHPQLLPSAQPGEVAATVHPVVA 228
>gi|399065297|ref|ZP_10747863.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
gi|398029754|gb|EJL23202.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
Length = 389
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 147/356 (41%), Gaps = 53/356 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFS-GRIGEVEFVVCRDDNGKIH 92
P+ Y+D F E RVF SWQ+V + L D+ + IGE +V R + +
Sbjct: 20 PAWTYSDADFFEAEKERVFAPSWQIVCHESDLPGRGDWHTLDYIGE-SVIVVRGADSILR 78
Query: 93 AFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD------FNVK 145
AF NVCRH S + G SG VCPYH WTY LDG R+TG+ D F+
Sbjct: 79 AFTNVCRHRGSRIVDGASGCAKKLVCPYHAWTYDLDG------RLTGVPDSASYPAFDRA 132
Query: 146 EFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
GL P+++ W FV + + G +V Q + + E L +
Sbjct: 133 GHGLAPVQIEVWRGFVFVRLVDDGGPSVAQMMAPYEAMVEPYRFEELEALGRVTLRPR-- 190
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS------------------GLQLDS 244
E NWK DNY D G H+P AH GL G +D+
Sbjct: 191 ---------EVNWKNIGDNYSD-GLHIPVAHPGLTRLFGRSYGVEAKANVDRMWGDLMDT 240
Query: 245 YSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
S + E++ QR D R +Y ++PN + Y +D +P++P
Sbjct: 241 PSHNWSERM-YQRLLPPVPHLPADLQR---HWLYFKLWPNVAFDIYPDQVDFMQWLPVSP 296
Query: 305 TRCKVV-FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
T + Y L ++ KA + + + QV ED L VQ G+ S ++ G
Sbjct: 297 TTSLIREISYVLPDDRREMKAARYLNWRINRQVNTEDTELIARVQAGMASRSFSVG 352
>gi|119503690|ref|ZP_01625773.1| Rieske 2Fe-2S family protein [marine gamma proteobacterium
HTCC2080]
gi|119460752|gb|EAW41844.1| Rieske 2Fe-2S family protein [marine gamma proteobacterium
HTCC2080]
Length = 393
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 156/361 (43%), Gaps = 26/361 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ YTD F E V R+W + ++ ++ ++ + RD G +
Sbjct: 30 PNVAYTDHDFWLFERDHVLGRTWAALSFSSEVCGSGVTVPITFMDLPLFMVRDAEGCVRV 89
Query: 94 FHNVCRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITGI-----KDFNVKEF 147
FHNVC H L + + + + CPYH W Y L G L I G+ F+ +E
Sbjct: 90 FHNVCSHRGMQLVSETSQAGLMIRCPYHRWGYDLSGQLKATPNIGGMGIHDTAGFDCREH 149
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVAN-EWLGGSSEILSINGIDSSLSYLCR 206
L + A + + +N+ EA E + + + A + L G+ + L
Sbjct: 150 ALKEVRSAEYLGMIFINLSGEACPIETLLAPITARWQALAGTDFSQHLANDPGDFGTL-- 207
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQRCESGSTEG 265
E T+ CN+K+ +NY + YH+P H L S L Y+ + E S Q + E
Sbjct: 208 -ELTVNCNYKLAVENYCES-YHLPSIHPDLNSYSPLAQHYNLIVDEVASGQGTHTYDLER 265
Query: 266 TD----------DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP--TRCKVVFDY 313
++ D RL + Y +YPN ++ ++ +AP TR ++ F Y
Sbjct: 266 SEGPPLPIFPNWDGERLKTGE-YLSLYPNVLLGLQADHFFAIILTSVAPDETRERLQFFY 324
Query: 314 FLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+L D+ +SL + QV EDI + EG+QRG S A+ G ++P ++ +HF
Sbjct: 325 AGANALDDETLQRRRSLHGAWSQVFSEDISVVEGMQRGRGSSAFNGGIFSPVMDGPTHHF 384
Query: 373 H 373
H
Sbjct: 385 H 385
>gi|443305803|ref|ZP_21035591.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. H4Y]
gi|442767367|gb|ELR85361.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. H4Y]
Length = 450
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE ++ R WQ+ +++ P DF I + +V R DN + A
Sbjct: 17 PKQRYYDPEFYALEAEMLWPRVWQMACRLEEIPKPGDFVEYEILDQSVIVARVDNHTVRA 76
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH L G+G + FVCP+HGW +GLDG T + ++ + + LVP
Sbjct: 77 YHNACRHRGVKLVEGNGNRRTFVCPFHGWCWGLDGHNTFVLRPEAFAEENLSADDLRLVP 136
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ WG +N+ +A +W+ + + +DS R E+
Sbjct: 137 VRCELWGGCAWINLDDDA---------PALRDWMEPFASVYDAWQVDS-----LRVEWWQ 182
Query: 212 EC----NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
C NWK+ +++ GYHVP H L Q + +++ V+
Sbjct: 183 SCRLPVNWKLAAAAFME-GYHVPQTHPQLLPSAQPGEVAATVHPVVA 228
>gi|294083824|ref|YP_003550581.1| Rieske (2Fe-2S) domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663396|gb|ADE38497.1| Rieske (2Fe-2S) domain protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 378
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 154/352 (43%), Gaps = 27/352 (7%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q P+ +A P Y L EL +F W G D++ + D+ + +G+ ++
Sbjct: 13 QKPLSEAKALPRDVYISADILHHELEHIFGHDWICAGRNDEIPNVGDYLTFDLGDQPLLL 72
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
R + IHA NVC H LA GSG F CPYH WTY +DG L+ A + F+
Sbjct: 73 VRGTDNNIHARANVCLHRMMRLADGSGHTKKFTCPYHAWTYDIDGRLVAAAYMDRSSCFD 132
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ L + + ++ ++M K+AV SN++A+ +++ +D ++
Sbjct: 133 RRHMHLPEIRCEIFHGWIYVSMNKDAVPI----SNLLAD-----LDPLVAPYQMDKYVT- 182
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQ---------LDSYSTSLYE 251
+ R+ + NWK +N+++ GYH+P AHK G GL D ++ +
Sbjct: 183 IFRQHNVWQTNWKHLTENFME-GYHLPVAHKNTVGAYFGLMDTCFDDRGSFDHFTYQTFT 241
Query: 252 KVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVF 311
K S S + T + +I ++P M + + PL + K+++
Sbjct: 242 KSSNAPVGSAHPDNKTLTGTARNTSIMPTVFPTHMYVLAPDHLWYLSLQPLGVDQVKILY 301
Query: 312 DYFLD----GSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ + K+ +I ++ + VQ ED + E + +G ++P SG
Sbjct: 302 GAAIAPEVLAAQKNVDDYIAKTRAFLDDVQEEDRFVVENIFKGAQAPLSTSG 353
>gi|440776522|ref|ZP_20955365.1| hypothetical protein D522_06600 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436723407|gb|ELP47229.1| hypothetical protein D522_06600 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 389
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 127/304 (41%), Gaps = 18/304 (5%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ L P +Y DP +E ++ R + + QL + D+ + +V RD
Sbjct: 32 ERELRVPLHYYRDPKITEIEEAQILRRVPLAIVPSAQLPNTNDYVVRSVLGDSLLVTRDR 91
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+G H N CRH ++ A GSG + FVCPYH WTY G L G N K++
Sbjct: 92 SGASHVLLNYCRHRGAMPACGSGNTARFVCPYHAWTYKNTGELFSVPGKAGFDSMNTKDY 151
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GLV L F+ + D+ + + LG L++ SS Y +R
Sbjct: 152 GLVELPSEERHGFIWAVL--------TADATIDLDAHLGDFGAELALWNY-SSYGYHTQR 202
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAH-------KGLASGLQLDSYSTSLYEKVSIQRCES 260
E+T E +WK + + + GYH PY H LA+ + D + +
Sbjct: 203 EFTSEVSWKGALEAFAE-GYHFPYVHGQSLIGQNTLANTMVYDEFGKHHRIGFPFTWITN 261
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL-APTRCKVVFDYFLDGSL 319
+T+ L + + ++YPN ++ ++ ++P APTRC V +
Sbjct: 262 AATDPAASLEPLANMGVIYWVYPNLILANSPVGLEIIDMLPAGAPTRCTVRHSWMARVPA 321
Query: 320 KDDK 323
DD+
Sbjct: 322 ADDE 325
>gi|359775116|ref|ZP_09278459.1| putative iron-sulfur protein [Arthrobacter globiformis NBRC 12137]
gi|359307571|dbj|GAB12288.1| putative iron-sulfur protein [Arthrobacter globiformis NBRC 12137]
Length = 406
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 154/352 (43%), Gaps = 22/352 (6%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ E R+F + W + L P + + ++G ++ R G+I AF+NV
Sbjct: 19 YTDPAIFRAEQERIFEQMWFCAIRSADLDKPGAWQTVQVGRESVLISRTRKGEIRAFYNV 78
Query: 98 CRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
CRH L G ++ F CPYH WTY +G L+ A +T + D + E+GL + +
Sbjct: 79 CRHRGVKLCMEEKGEAARN-FQCPYHAWTYDFEGKLIAAPNLTKMPDIDRDEYGLSKVHI 137
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYTIEC 213
+ +V + + +E EE + E LG + +I+G D ++LS R Y ++
Sbjct: 138 REYLGYVWVCLAEEPPSFEEEVMGAI-EERLGN---VHAIDGYDVANLSVGRRIRYDVKA 193
Query: 214 NWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLDSYSTSLYE-KVSIQRCESGSTEG 265
NWK+ +N+++ YH H L A GL + E I+ +EG
Sbjct: 194 NWKLIIENFME-CYHCATIHPELTEVLPEFADGLAAQYFVGHGAEFGEDIKGFTVDGSEG 252
Query: 266 TDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
D + + YA I P +N + + + P++ V D+ S+ +
Sbjct: 253 LDVIPGVAEDQDRRYYAITIKPTVFVNLVPDHVIIHRMFPMSADHTIVECDWLYLPSVVE 312
Query: 322 DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+ S++ +V M+D CE Q G+ S +Y G E + FH
Sbjct: 313 SGKDVSASVELFHRVNMQDFDACERCQPGMASKSYAKGGVLVPSEHHIGAFH 364
>gi|83952575|ref|ZP_00961306.1| Rieske 2Fe-2S domain protein [Roseovarius nubinhibens ISM]
gi|83836248|gb|EAP75546.1| Rieske 2Fe-2S domain protein [Roseovarius nubinhibens ISM]
Length = 379
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E+A P S YT FLA E+ VF + W V D L +P D+ + + +V R
Sbjct: 21 PFERARAMPKSVYTSEEFLAAEIENVFKQDWFCVTRADALPNPGDYTTLELAGQPIMVIR 80
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D G++ A NVC H S L GSG VCPYH WTY LDG L A +T + F
Sbjct: 81 DREGQLRAQSNVCLHRMSTLLEGSGNTRAIVCPYHAWTYNLDGRLRGAPAMTLNEAFCKD 140
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
L + W +V++ + +A +E L G ++++ +++
Sbjct: 141 GQALPQVRCEEWLGWVMITLNPDA---------PPVSETLAGVADLVGDYEMENYQQTFF 191
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ + NWKV +N+++ YH+P H G GL
Sbjct: 192 -ETHRWDTNWKVLAENFME-SYHLPVCHAGTIGGL 224
>gi|322692296|gb|EFY84221.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Metarhizium acridum CQMa 102]
Length = 323
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 54/344 (15%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WYT P+ LE +F + W +V + + D F F + +D G+I A
Sbjct: 24 PAAWYTSPAMYELERRAIFSKKWLLVTHVLRFPDIGHFVRITEAGYTFFLIKDRQGQIRA 83
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
HNVCRH A I+ SGK S C YHGW+YG DG L KA + I F ++ GL +
Sbjct: 84 HHNVCRHRAYPIIEKDSGKASVLACKYHGWSYGFDGHLAKAPKYQEISSFKREDNGLYRV 143
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR----- 207
V + N+G V+ + D+ V E + ++ L + ++
Sbjct: 144 HVH------VDNLGFVWVNLDANDTPSVPWE-----QDFARVDFQPRLLEFDMKKYHFDH 192
Query: 208 --EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
E T + NWKV DNY + YH P H L + L Y + + S + + +
Sbjct: 193 EWEMTGDYNWKVLADNY-NECYHCPTGHPALPAVTDLTKY----WVETSGGHIQHYAVDR 247
Query: 266 TD-DTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA 324
D + LG+ + Y +YPN + V D D +
Sbjct: 248 EDPEAQSLGNVSTY--LYPNASMT--------------------VTHDDATDAEFTEISD 285
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
F + ++ ED LC G Q+ L S + +G P VE+
Sbjct: 286 FFKNIMR-------EDKELCNGAQKNLNSGIFLNGELHPRVEKA 322
>gi|41407031|ref|NP_959867.1| hypothetical protein MAP0933 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395382|gb|AAS03250.1| hypothetical protein MAP_0933 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 409
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 127/304 (41%), Gaps = 18/304 (5%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ L P +Y DP +E ++ R + + QL + D+ + +V RD
Sbjct: 52 ERELRVPLHYYRDPKITEIEEAQILRRVPLAIVPSAQLPNTNDYVVRSVLGDSLLVTRDR 111
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+G H N CRH ++ A GSG + FVCPYH WTY G L G N K++
Sbjct: 112 SGASHVLLNYCRHRGAMPACGSGNTARFVCPYHAWTYKNTGELFSVPGKAGFDSMNTKDY 171
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GLV L F+ + D+ + + LG L++ SS Y +R
Sbjct: 172 GLVELPSEERHGFIWAVL--------TADATIDLDAHLGDFGAELALWNY-SSYGYHTQR 222
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAH-------KGLASGLQLDSYSTSLYEKVSIQRCES 260
E+T E +WK + + + GYH PY H LA+ + D + +
Sbjct: 223 EFTSEVSWKGALEAFAE-GYHFPYVHGQSLIGQNTLANTMVYDEFGKHHRIGFPFTWITN 281
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL-APTRCKVVFDYFLDGSL 319
+T+ L + + ++YPN ++ ++ ++P APTRC V +
Sbjct: 282 AATDPAASLEPLANMGVIYWVYPNLILANSPVGLEIIDMLPAGAPTRCTVRHSWMARVPA 341
Query: 320 KDDK 323
DD+
Sbjct: 342 ADDE 345
>gi|405381228|ref|ZP_11035058.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF142]
gi|397322300|gb|EJJ26708.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF142]
Length = 409
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P A P+ YT E +F+R W V+ D+ K+P D+ + + +F++
Sbjct: 35 RLPRPDATHLPAELYTSEEVFEREKELLFFRDWIVMAREDEFKEPGDYRTFEMAGEKFII 94
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
R +G++ AF N CRH + +A G G FVCPYH WTY L G L+ R + +F+
Sbjct: 95 ARGRDGELRAFINSCRHRGTPIAYGEGNVKAFVCPYHAWTYDLTGKLINPLRSKQLGNFD 154
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEE-VDSNVVANEWLGGSSEILSINGIDSSLS 202
L L++ T+G FV +N A EE +DS G E LS + L+
Sbjct: 155 TTTCRLPELKIGTFGGFVFVNFDPNARSLEEFLDSE--------GFREELSFLRCE-DLA 205
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+ + ++ NWKV + D YHV HK
Sbjct: 206 TIDNYTFDMDANWKVVMEVGAD-VYHVEVVHK 236
>gi|390166297|ref|ZP_10218560.1| putative dioxygenase large terminal subunit [Sphingobium indicum
B90A]
gi|389590694|gb|EIM68679.1| putative dioxygenase large terminal subunit [Sphingobium indicum
B90A]
Length = 385
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDF-FSGRIGEVEFVVCRD 86
+ A + P+ Y DP F LE R+F SWQ+V + + P DF IGE ++ R
Sbjct: 11 DAAWSLPAWTYRDPEFFDLERRRIFRPSWQIVAHESDIPAPGDFRLLDYIGE-SVILMRG 69
Query: 87 DNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----- 140
+G + AF NVCRH A I+ +G CPYHGWTY G R++G+
Sbjct: 70 GDGLVRAFANVCRHRGARIVDAAAGCARTLTCPYHGWTYDDRG------RLSGVPLEESY 123
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN-GIDS 199
+ GL +EV + F+ + + E+ VA + EI + G
Sbjct: 124 GLDRARHGLHAVEVENFHGFLFVRL-------EDDGGPSVAEMMVPYVQEIAAHRFGELR 176
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLA----------SGLQLDSYSTSL 249
++ + R + NWK+ DNY D HV AH GL + D S +
Sbjct: 177 AMGRVTLRPRAV--NWKIVGDNYAD-ALHVAVAHPGLRRLMGAGYRVEAAAHADRMSAPI 233
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKA----IYAFIYPNFMINRYGPWMDTNLVIPLAPT 305
+ S + E LG + Y ++PN + Y +D +PL+PT
Sbjct: 234 LRRPSAKLSERAYQHFLPRIPHLGDERQRLWTYFRLWPNIAFDIYPDQVDFMQWLPLSPT 293
Query: 306 RCKVV-FDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R + Y + ++ KA + + + +V ED L E VQ GL S ++ G + +
Sbjct: 294 RSLIREVAYAIPDERREMKAARYLNWRINRRVNAEDRALLERVQAGLSSDSFTVGPLS-T 352
Query: 365 VEQTMYHF 372
E + HF
Sbjct: 353 QEVALRHF 360
>gi|410630485|ref|ZP_11341174.1| rieske (2Fe-2S) domain protein [Glaciecola arctica BSs20135]
gi|410149927|dbj|GAC18041.1| rieske (2Fe-2S) domain protein [Glaciecola arctica BSs20135]
Length = 376
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 36/331 (10%)
Query: 65 LKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTY 124
L DF + + V +V R + KI AF N CRH + L +GSG K FVCPYHGW Y
Sbjct: 63 LAKAGDFITQNVAGVPLIVVRGQDKKIRAFKNACRHRGTQLVSGSGCKKAFVCPYHGWVY 122
Query: 125 GLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW 184
LDG L G F E GL ++V V + G N
Sbjct: 123 RLDGRLQGIPHEQGFPGFEKSEHGLSEVKVFEKCGLVFVQQG----------GNSKTENL 172
Query: 185 LGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
L G +L + + + E TIE NWKV+ +++++ GYH+ +AH D+
Sbjct: 173 LEGLPVLL-----QQHHTIISKNEATIEANWKVYLESFIE-GYHIKFAHPETFYPFGYDN 226
Query: 245 YST----SLYEKVS--IQRCESGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTN 297
+ + +V+ +R ES T+ T + + Y + ++PN ++ +
Sbjct: 227 LNIIEFCGPHARVTFPFRRMES-LTDVTPSQRDVSGRLTYVYHLFPNVVVTLLSHHTNVI 285
Query: 298 LVIPLAPTRCKVVFDYFLDGSLK-DDKAFIEQSLKD----SEQVQMEDIILCEGVQRGLE 352
++ P+ + + ++ D + +E + +D ++ +ED+ L G+Q+ +
Sbjct: 286 ILEPVDINTTRTTLYQLTNQTIDGDQQVALEAAKRDMSFVAQTGALEDLALVRGIQKSIN 345
Query: 353 S---PAYCSGRYAPSVEQTMYHFHSLLHCNL 380
S A+ G + P++ HFH L L
Sbjct: 346 SGANDAFTFGYFEPAI----VHFHQHLGAQL 372
>gi|428776525|ref|YP_007168312.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428690804|gb|AFZ44098.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 363
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 160/359 (44%), Gaps = 36/359 (10%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YT+P ++ E ++F ++W VG DQL + + F I + ++ + + I A+
Sbjct: 18 ADFYTNPKLVSQEKEKIFRQTWVYVGDIDQLFNDNNVFVTEIADTSILLIKTEEYSIRAY 77
Query: 95 HNVCRHHASILATGSGKKSW--FVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVP 151
+N+C H AS+L + SG++S VCPYH W Y L+G L+ + F ++++ L
Sbjct: 78 YNLCPHRASLLCSESGQQSLKQLVCPYHAWVYSLEGKLMGTPSQERFPETFKLEDYPLKS 137
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVV-ANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ W F+ ++ + NV +LG + + + + L ++
Sbjct: 138 VRCEIWEGFLFVSF----------NPNVPDLKTFLGSIPQTIQGYRLPET-KQLVQQTDE 186
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQ---------LDSYSTSLYEKVSIQRCESG 261
+ CNWKV+ DN L YHVP H+ + +Q D+Y LY + Q +
Sbjct: 187 VACNWKVYHDNTL-CDYHVPIVHRNTLNKVQGAVRYYEHYFDTYVNLLYTPTTAQWRKDH 245
Query: 262 STEGTDDTHRLGSKAIYAFIYPNF----MINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
T + + + I+PN + N W+ + PL C+V + +
Sbjct: 246 PILDTIPSEKARNGFFTYGIFPNLHFLALPNGVLAWIRID---PLTVHSCQVHLEIY--- 299
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ + E+ ++ ED+ + E VQ+G ES Y +G A +E + H +L+
Sbjct: 300 GIPNFSPPAEELSQEFAAFMKEDMAVTEMVQKGYESGGYEAG-IANQLEHRILHQQALI 357
>gi|118466447|ref|YP_880368.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium 104]
gi|254773992|ref|ZP_05215508.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium
subsp. avium ATCC 25291]
gi|118167734|gb|ABK68631.1| Rieske [2Fe-2S] domain protein [Mycobacterium avium 104]
Length = 389
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 127/304 (41%), Gaps = 18/304 (5%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ L P +Y DP +E ++ R + + QL + D+ + +V RD
Sbjct: 32 ERELRVPLHYYRDPKITEIEEGQILRRVPLAIVPSAQLPNTNDYMVRSVLGDSLLVTRDR 91
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+G H N CRH ++ A GSG + FVCPYH WTY G L G N K++
Sbjct: 92 SGASHVLLNYCRHRGAMPACGSGNAARFVCPYHAWTYKNTGELFSVPGKAGFDSMNTKDY 151
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GLV L F+ + D+ + + LG L++ SS Y +R
Sbjct: 152 GLVELPSEERHGFIWAVL--------TADATIDLDAHLGDFGAELALWNY-SSYGYHTQR 202
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAH-------KGLASGLQLDSYSTSLYEKVSIQRCES 260
E+T E +WK + + + GYH PY H LA+ + D + +
Sbjct: 203 EFTSEVSWKGALEAFAE-GYHFPYVHGQSLIGQNTLANTMVYDEFGKHHRIGFPFTWITN 261
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL-APTRCKVVFDYFLDGSL 319
+T+ L + + ++YPN ++ ++ ++P APTRC V +
Sbjct: 262 AATDPAASLEPLANMGVIYWVYPNLILANSPVGVEIIDMLPAGAPTRCTVRHSWMARVPA 321
Query: 320 KDDK 323
DD+
Sbjct: 322 ADDE 325
>gi|119503953|ref|ZP_01626035.1| hypothetical protein MGP2080_02481 [marine gamma proteobacterium
HTCC2080]
gi|119460461|gb|EAW41554.1| hypothetical protein MGP2080_02481 [marine gamma proteobacterium
HTCC2080]
Length = 385
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 147/359 (40%), Gaps = 40/359 (11%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+EK L P +Y D + E +F+ W +G + L P D+ + R GE VV R
Sbjct: 9 LEKTL--PREYYLDDALYQREFAAIFHCDWVCIGRAEALSQPGDYKAVRFGEQSIVVLRG 66
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKS-------WFVCPYHGWTYGLDGTLLKATRITGI 139
+ ++ AF+NVCRH + L ++ CPYH W+Y LDGTL R T
Sbjct: 67 EAFELRAFYNVCRHRGAELVPMPDSQTRRGHFDRRITCPYHAWSYRLDGTL----RGTPH 122
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
L P+ VA WG F+ + + E LG +++ L N S
Sbjct: 123 LAIEPGATTLHPVSVAEWGGFIFIRLDDR--------RGESLTEALGAATQRLK-NYPLS 173
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL---------ASGLQLDSYSTSLY 250
L EY ++ NWKV +NY + YH H L G LD +
Sbjct: 174 DLRLGHSLEYQVDANWKVILENY-NECYHCGPVHPELCKIVPAFRQGGGHDLDWDIGVPH 232
Query: 251 EKVSIQRCESGSTE-----GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPT 305
S SGST G DT + K YPN M++ + V P +
Sbjct: 233 RDGSDTFTASGSTHRAPFPGLSDTEKTHHKG--ELFYPNLMLSLAMDHVAAFYVWPKSAG 290
Query: 306 RCKVVFDYFLDGSLKDDKAFIE-QSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
++ D+ S + F +++ + V +D +CE VQRG+++ + G YAP
Sbjct: 291 VTQIRCDFLFHPSELEKPNFDPMDAVEFWDLVNKQDWKICESVQRGMQNAVFKHGYYAP 349
>gi|425773254|gb|EKV11621.1| monooxygenase, putative [Penicillium digitatum Pd1]
gi|425778763|gb|EKV16868.1| monooxygenase, putative [Penicillium digitatum PHI26]
Length = 321
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 30/333 (9%)
Query: 46 LELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHA-SI 104
LE +F + W ++ ++ + D+ S + F + +D +G I++FHN+CRH A +
Sbjct: 4 LERRAIFSKRWMLLTHSSRFTKAGDYLSFTVANFSFFLIQDRDGTINSFHNICRHRAFPV 63
Query: 105 LATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV-ATWGPFVLL 163
+ + SG C YHGW+YGL G L KA R + +F+ + L P+ V FV +
Sbjct: 64 VQSPSGTAPILSCKYHGWSYGLKGNLAKAPRFETVPNFDKTQHSLYPIHVHVDKAGFVWV 123
Query: 164 NMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR--EYTIECNWKVFCDN 221
N+ + +++V + G E + D + Y E ++ NWK DN
Sbjct: 124 NL-------QAGETDVKWEDDYGKVDEEPRMQDFDFAAEYKFDHYWEMELDANWKSIIDN 176
Query: 222 YLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFI 281
Y + YH +H + L Y K + EG+D R +AI +
Sbjct: 177 Y-NECYHCATSHPLIKRISDLPKYRVE--PKARYMEHHIFNKEGSDSQFR---RAI-TYF 229
Query: 282 YPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF-----LDGSLKDDKAFIEQSLKDSEQV 336
YP + + ++P++ T ++ + + DG ++ AF Q L
Sbjct: 230 YPTTSVTVTDKFFYIQRMVPVSATSSRIENEIYRHRDATDGEFENINAFYRQVLD----- 284
Query: 337 QMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
ED LC G Q L + + +G P E+ +
Sbjct: 285 --EDKELCVGTQENLGAKVFTNGELHPDKEKVV 315
>gi|254454412|ref|ZP_05067849.1| rieske (2Fe-2S) protein [Octadecabacter arcticus 238]
gi|198268818|gb|EDY93088.1| rieske (2Fe-2S) protein [Octadecabacter arcticus 238]
Length = 411
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 162/391 (41%), Gaps = 47/391 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P++ YTDP E V + SW + + D + ++ R
Sbjct: 26 PVATANGLPNAHYTDPDVFKSESRAVLHASWAGFAVAADVPENGDAKPLEFLGIPLLLLR 85
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITG----IK 140
D NG + F N+CRH IL + K + CPYH W Y G L+ + G
Sbjct: 86 DKNGDVRVFQNICRHRGMILVDSARKIEGAIRCPYHSWCYSTKGALVSTPHVGGPGHNTH 145
Query: 141 DFNVKE-FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
D VK+ GL+ + W V +N+ +A E V+++++A W ++ + G DS
Sbjct: 146 DAIVKDDLGLIEVRSHIWRDVVFINLDGDADAFEVVNADLIA-RWHEHTAPMYH-GGADS 203
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
+ + + CNWK+ +NY + YH+P+ H GL S +L+ + + + +S
Sbjct: 204 TFAL------DVTCNWKLAVENYAES-YHLPWIHPGLNSYSRLEDH-YHIEQPISSSGAR 255
Query: 260 SGSTEGT--------------------------DDTHRLGSK----AIYAFIYPNFMINR 289
S S G+ D L K A Y +YPN ++
Sbjct: 256 SASKTGSAIGTGAFSGQGTLVYRQLTGDEGATFPDFAGLSDKWDEGAEYVCLYPNVLLAA 315
Query: 290 YGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQR 349
L+ P+ T + + S D A ++ ++V EDI + EG+Q+
Sbjct: 316 QREHAYAILLEPI-DTNHTIEHVHIYYASPDTDAALRTRNTAQWKEVFEEDIGVVEGMQK 374
Query: 350 GLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
G + + GR++P+++ + FH + +
Sbjct: 375 GRAAIGFDGGRFSPAMDSPTHCFHDWVAAKM 405
>gi|358460436|ref|ZP_09170619.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357076249|gb|EHI85725.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 434
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 147/374 (39%), Gaps = 36/374 (9%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P +A T P++ YTD F A E VF + W +G + +P DF + I +
Sbjct: 17 LPTSQASTLPATCYTDEEFFAFEKEAVFGQEWLCLGRESDVPNPGDFVNVEIIGERLTLV 76
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R +G + VC+H +++ G G F C YH WTYGLDG L+ A + +DF+
Sbjct: 77 RGQDGAVRVLSPVCQHRGMLVSEGRGNCRAFKCAYHHWTYGLDGGLVGAREMDRTEDFDR 136
Query: 145 KEFGLVPLEVATWGPFVL--LNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+GL L V W FV L E + L E+ + + +S
Sbjct: 137 SRWGLPSLPVEVWQGFVFTSLRAAPEPLAPR-----------LAKLDELFAHYELGRCVS 185
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY--EKVSIQRCES 260
++ NWK+ +N+ D GYH H G+ + S Y + +I R
Sbjct: 186 RKSFESPSMPWNWKIMFENFND-GYHASRLHAGVHDFCPSNRSSFLPYGPDDAAIARTNG 244
Query: 261 -----GSTEGTDD---------THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTR 306
G T S+A +A + P + L+ P
Sbjct: 245 FLFPDGGFNALQKALLPIFPGLTQEERSRAAFALVPPTLCLGVAPDQAFYFLIRPKDAGH 304
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDSEQ----VQMEDIILCEGVQRGLESPAYCSGRYA 362
+V Y D+ F E+ + SE + +D++ GVQRGL S GRY+
Sbjct: 305 IEVEVHYLFHPEALRDRLF-EERFQLSEAGVNGIVAQDVLATTGVQRGLTSRFAPRGRYS 363
Query: 363 PSVEQTMYHFHSLL 376
+E+ F+ L
Sbjct: 364 -YLEEAQQQFNQWL 376
>gi|254461321|ref|ZP_05074737.1| rieske 2Fe-2S domain protein [Rhodobacterales bacterium HTCC2083]
gi|206677910|gb|EDZ42397.1| rieske 2Fe-2S domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 363
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 147/353 (41%), Gaps = 35/353 (9%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P + + P +YT E V + W +G D++ + DFF+ ++ E ++
Sbjct: 7 LPADSPMGLPGIFYTSAERFDWEKKTVLQKGWHCLGRQDEVPEAGDFFTVQLLEEPLIIV 66
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R D+G + NVCRH LA G G FVC YH W YG DG LL+ATR+ K F+
Sbjct: 67 RGDDGVVRVLANVCRHRGMPLAEGRGNVKRFVCSYHAWMYGRDGALLRATRMEN-KGFDA 125
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAV--HQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
L + W F+ ++ EA E + + + + ++ +
Sbjct: 126 SSCRLHSYNIQLWNGFIYCSLDAEAAPFSNEAETLDALLEPYKSDTFRLVHVA------- 178
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAH-------------KGLASGLQLDSYSTSL 249
E NWK +N+++ GYH+ H K ASG SY +
Sbjct: 179 -----EEVWHTNWKCLVENFME-GYHLSVVHPQTLHDYTPTGLAKKSASGPGFTSYMAN- 231
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
Y + + +R + + G D R S F P + ++ + + + P++ + +V
Sbjct: 232 YPETAARRGKGAA--GLSDAERHRSTLFARF--PTQVASQAASLLVSLSIFPISAEKIRV 287
Query: 310 VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
+ + G D A I++ ++ E+V ED E +Q L S SG A
Sbjct: 288 KWTMSVYGD-DLDAATIQERIQLWEEVNTEDREKLEKMQIALRSQHAQSGPLA 339
>gi|116053558|ref|YP_793885.1| ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|421177675|ref|ZP_15635321.1| GbcA [Pseudomonas aeruginosa CI27]
gi|115588779|gb|ABJ14794.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|404528865|gb|EKA38923.1| GbcA [Pseudomonas aeruginosa CI27]
Length = 429
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 2/135 (1%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D +++ +F++ W + G T ++ +F + +IG+ +V R G++HA
Sbjct: 34 PQPFYCDQRLFEIDMQEIFHKEWLIAGMTCEIPAKGNFLTLQIGKNPVLVIRGAEGQVHA 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++KE+GL P+
Sbjct: 94 FHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKEYGLKPI 152
Query: 153 EVATWGPFVLLNMGK 167
+V T G ++ +++ +
Sbjct: 153 QVKTAGGYIFISLAE 167
>gi|152989271|ref|YP_001351508.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa PA7]
gi|150964429|gb|ABR86454.1| probable ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa PA7]
Length = 429
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 2/135 (1%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D +++ +F++ W + G T ++ +F + +IG+ +V R G++HA
Sbjct: 34 PQPFYCDQRLFEIDMQEIFHKEWLIAGMTCEIPAKGNFLTLQIGKNPVLVIRGAEGQVHA 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++KE+GL P+
Sbjct: 94 FHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKEYGLKPI 152
Query: 153 EVATWGPFVLLNMGK 167
+V T G ++ +++ +
Sbjct: 153 QVKTAGGYIFISLAE 167
>gi|254250643|ref|ZP_04943962.1| 2,4-D oxygenase large subunit [Burkholderia cenocepacia PC184]
gi|124879777|gb|EAY67133.1| 2,4-D oxygenase large subunit [Burkholderia cenocepacia PC184]
Length = 382
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 146/357 (40%), Gaps = 27/357 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P YT P FL E +F W +G L +P D+ + I +V R D+G + A
Sbjct: 33 PPGVYTSPEFLEREQQTLFRNEWLCMGRASALPNPGDYLTAEIAGQPIIVIRRDDGTLRA 92
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
NVC H S L G G VCPYH W Y LDG L A + F + L +
Sbjct: 93 MSNVCLHRMSTLLEGRGNVRRIVCPYHAWNYSLDGDLRAAPMMDRQDGFCKDSYKLPQVR 152
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
W +V + + +EA S V A L E++ +N +S E+ +
Sbjct: 153 CEIWQGWVYVTLNEEA-------SPVAAR--LKELDELI-VNYDMASYVETFHEEHVWDT 202
Query: 214 NWKVFCDNYLDGGYHVPYAHKG-LASGLQLDSYSTSL------YEKVSIQRCESGSTEGT 266
NWK+ +N+++ YH+P H+ + +LD Y ++ +
Sbjct: 203 NWKILAENFME-SYHLPMLHRATVGPHSRLDEMECPPGLPAFNYHWITKEASLPIGNAHP 261
Query: 267 DDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDD 322
D+T G + A+ A IYP ++ + ++ PL R + F L DD
Sbjct: 262 DNTRLQGQWRKTTALLA-IYPTHLVTLTPGYFWYLVLQPLGVDRVHIRFGGGLSPEFIDD 320
Query: 323 KAFIE--QSLKD-SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
E +LK ++V +ED E V RG+ +P G + +E+ Y F L
Sbjct: 321 PKAAEYMATLKKLLDEVNLEDRRGVEAVFRGVHAPLAKPGHLS-HLERPNYDFARYL 376
>gi|15600603|ref|NP_254097.1| protein GbcA [Pseudomonas aeruginosa PAO1]
gi|107104512|ref|ZP_01368430.1| hypothetical protein PaerPA_01005590 [Pseudomonas aeruginosa PACS2]
gi|218894514|ref|YP_002443384.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa LESB58]
gi|254237904|ref|ZP_04931227.1| hypothetical protein PACG_04007 [Pseudomonas aeruginosa C3719]
gi|254242962|ref|ZP_04936284.1| hypothetical protein PA2G_03749 [Pseudomonas aeruginosa 2192]
gi|313111659|ref|ZP_07797454.1| GbcA [Pseudomonas aeruginosa 39016]
gi|355650707|ref|ZP_09056209.1| hypothetical protein HMPREF1030_05295 [Pseudomonas sp. 2_1_26]
gi|386061587|ref|YP_005978109.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa M18]
gi|386069068|ref|YP_005984372.1| putative ring hydroxylating dioxygenase alpha-subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|392987134|ref|YP_006485721.1| ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa DK2]
gi|416863430|ref|ZP_11915287.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa 138244]
gi|418587503|ref|ZP_13151533.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591760|ref|ZP_13155650.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|419754114|ref|ZP_14280508.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|420138260|ref|ZP_14646194.1| GbcA [Pseudomonas aeruginosa CIG1]
gi|421153292|ref|ZP_15612844.1| GbcA [Pseudomonas aeruginosa ATCC 14886]
gi|421159149|ref|ZP_15618317.1| GbcA [Pseudomonas aeruginosa ATCC 25324]
gi|421171368|ref|ZP_15629236.1| GbcA [Pseudomonas aeruginosa ATCC 700888]
gi|421183514|ref|ZP_15640971.1| GbcA [Pseudomonas aeruginosa E2]
gi|421519982|ref|ZP_15966653.1| putative ring hydroxylating dioxygenase alpha-subunit [Pseudomonas
aeruginosa PAO579]
gi|424943786|ref|ZP_18359549.1| probable ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa NCMG1179]
gi|451983962|ref|ZP_21932225.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas aeruginosa
18A]
gi|9951736|gb|AAG08795.1|AE004953_9 GbcA [Pseudomonas aeruginosa PAO1]
gi|126169835|gb|EAZ55346.1| hypothetical protein PACG_04007 [Pseudomonas aeruginosa C3719]
gi|126196340|gb|EAZ60403.1| hypothetical protein PA2G_03749 [Pseudomonas aeruginosa 2192]
gi|218774743|emb|CAW30560.1| probable ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa LESB58]
gi|310883956|gb|EFQ42550.1| GbcA [Pseudomonas aeruginosa 39016]
gi|334835406|gb|EGM14283.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa 138244]
gi|346060232|dbj|GAA20115.1| probable ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa NCMG1179]
gi|347307893|gb|AEO78007.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa M18]
gi|348037627|dbj|BAK92987.1| putative ring hydroxylating dioxygenase alpha-subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|354826687|gb|EHF10897.1| hypothetical protein HMPREF1030_05295 [Pseudomonas sp. 2_1_26]
gi|375041862|gb|EHS34538.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049421|gb|EHS41918.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|384399605|gb|EIE45974.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|392322639|gb|AFM68019.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa DK2]
gi|403248979|gb|EJY62501.1| GbcA [Pseudomonas aeruginosa CIG1]
gi|404345901|gb|EJZ72253.1| putative ring hydroxylating dioxygenase alpha-subunit [Pseudomonas
aeruginosa PAO579]
gi|404520307|gb|EKA30984.1| GbcA [Pseudomonas aeruginosa ATCC 700888]
gi|404523915|gb|EKA34298.1| GbcA [Pseudomonas aeruginosa ATCC 14886]
gi|404540095|gb|EKA49520.1| GbcA [Pseudomonas aeruginosa E2]
gi|404548251|gb|EKA57212.1| GbcA [Pseudomonas aeruginosa ATCC 25324]
gi|451758366|emb|CCQ84748.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas aeruginosa
18A]
gi|453042487|gb|EME90230.1| ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa PA21_ST175]
Length = 429
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 2/135 (1%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D +++ +F++ W + G T ++ +F + +IG+ +V R G++HA
Sbjct: 34 PQPFYCDQRLFEIDMQEIFHKEWLIAGMTCEIPAKGNFLTLQIGKNPVLVIRGAEGQVHA 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++KE+GL P+
Sbjct: 94 FHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKEYGLKPI 152
Query: 153 EVATWGPFVLLNMGK 167
+V T G ++ +++ +
Sbjct: 153 QVKTAGGYIFISLAE 167
>gi|322705135|gb|EFY96723.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Metarhizium anisopliae ARSEF 23]
Length = 424
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 154/368 (41%), Gaps = 54/368 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++WYT P+ LE +F + W +V + + D F F + RD G+I A
Sbjct: 24 PAAWYTSPAMYELERRAIFSKKWLLVTHVLRFPDIGHFVRITEAGYTFFLIRDRQGQIRA 83
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
HN+CRH A I+ SGK S C YHGW+YG DG L KA + I F ++ GL +
Sbjct: 84 HHNICRHRAYPIVEKDSGKASVLACKYHGWSYGFDGHLAKAPKYQEISSFKKEDNGLYRV 143
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR----- 207
V + N+G V+ + D+ V E + +++ L + +
Sbjct: 144 HVH------VDNLGFVWVNLDANDTPSVPWE-----QDFATVDFQPRLLEFDMNKYHFDH 192
Query: 208 --EYTIECNWKVFCDNY--------------LDG--------GYHVPYAHKGLASGLQLD 243
E T + NWKV DNY DG YH P H L + L
Sbjct: 193 EWEMTGDYNWKVLADNYNEVRGRSGTAKECKEDGYKLTCTKKCYHCPTGHPALPAVTDLA 252
Query: 244 SY----STSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLV 299
Y S + + ++ R + +++ LG+ + Y + + + + + +
Sbjct: 253 KYWVETSGAHIQHYAVDRQD-------EESKSLGNVSTYLYPNASMTVTYVIDFGEQHRC 305
Query: 300 IPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+P++ T+ + ++ + D + F E S + + ED LC G Q+ L S + G
Sbjct: 306 VPMSATQTHMEYEVYRHDDATDAE-FTEVS-DFFKTIMREDKNLCNGAQKNLNSGIFLHG 363
Query: 360 RYAPSVEQ 367
P VE+
Sbjct: 364 ELHPRVEK 371
>gi|300310673|ref|YP_003774765.1| phenylpropionate dioxygenase large terminal subunit [Herbaspirillum
seropedicae SmR1]
gi|300073458|gb|ADJ62857.1| phenylpropionate dioxygenase large terminal subunit protein
[Herbaspirillum seropedicae SmR1]
Length = 428
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
++ A+ PS YTDP+ E+ ++FY++W V + ++K+P DF + +IG +V RD
Sbjct: 20 VQDAVVDPS-LYTDPALFEAEMDKIFYKTWIWVAHESEIKNPGDFKTAQIGRQPVIVVRD 78
Query: 87 DNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
GKI+ N CRH A++ G + F CPYH W+YGLDG L G +D K
Sbjct: 79 KTGKINVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRGLPYPEGYEDVIEK 138
Query: 146 -EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVV--ANEWLGGSSEILSINGIDSSLS 202
+ L L ++ + + +E E S+ + A +W+ ++ G +
Sbjct: 139 ADLPLQSLRCESYHGMIFASFNQEI----EPLSDFLGHAKKWI----DLFMKQGAGFPIK 190
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+++ + NWK+ +N D GYH P HK S +
Sbjct: 191 VQGEHKFSFKGNWKIQLENTTD-GYHFPVVHKTFLSSV 227
>gi|374705053|ref|ZP_09711923.1| phenylpropionate dioxygenase large terminal subunit [Pseudomonas
sp. S9]
Length = 428
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP EL ++FYR+W VG+ ++++P DF + IG +V RD G I+
Sbjct: 27 SLYHDPQLYEQELEKIFYRTWVWVGHESEVRNPGDFRTTTIGRRPVIVVRDKKGAINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLE 153
N CRH A++ G + F CPYH W+Y LDG L G +D + E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYALDGKLRALPYPDGYEDILDKSELPLNSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ + A +EV+ ++LGG+ + + G + ++T
Sbjct: 147 VDSYAGMIF------ASFNDEVEP---LTDFLGGAKHWMDLFMKQGAGYPIKTQGEHKFT 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N D GYH P HK S +
Sbjct: 198 FNGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|424913518|ref|ZP_18336882.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|424916853|ref|ZP_18340217.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392849694|gb|EJB02215.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392853029|gb|EJB05550.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 411
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 157/373 (42%), Gaps = 61/373 (16%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y DP +L RVF R W + + + P DF R+ + ++ R +G IHA N
Sbjct: 34 FYMDPDIYERDLERVFRRHWHCLAHESVVPKPNDFEVFRMASEQVILTRHADGTIHALLN 93
Query: 97 VCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
VCRH A I G FVCPYH WTYG DG+ LKA R+ KDF +++GL L V
Sbjct: 94 VCRHRGAEICNRDKGNARVFVCPYHAWTYGNDGS-LKAARLMP-KDFKREDYGLKTLHVR 151
Query: 156 TWGPFVLLNMGKEAVHQEEVDS--NVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
+ ++ E + EV++ + ++ G +++ R+ Y ++
Sbjct: 152 VVEGLIFISFADEPLDFSEVENLLHATCGQYGWGQAKVAH------------RQTYPVDA 199
Query: 214 NWKVFCDNYLD----GGYHVPYA--HKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK+ +NY++ G H Y+ H +++ + S+ E+ E GS +
Sbjct: 200 NWKLAVENYVECYHCGPAHPEYSQTHALEQPAHMIEALNASMEERTRALGIEVGSGDRWQ 259
Query: 268 DTHRLGSKAIYAFIYP---------------NFMINRYGP------------------WM 294
+ + +AI+AF Y + ++ R+ +
Sbjct: 260 TSAK-NREAIHAFRYALYDGVKTGSQDGSPLSMLMGRFTEFDGGVTSVHLGGTSFLVCYP 318
Query: 295 DTNLV---IPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-EDIILCEGVQRG 350
D ++ IP P C++ + +DG ++ + + L V ED + E RG
Sbjct: 319 DYGMIYRFIPKGPRACEMELIWLVDGEAEEGRDYDLAKLVWLWTVTTDEDKAIIEHTSRG 378
Query: 351 LESPAYCSGRYAP 363
+ S + G AP
Sbjct: 379 VASHYFLPGPIAP 391
>gi|429215381|ref|ZP_19206543.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M1]
gi|428154608|gb|EKX01159.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M1]
Length = 427
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++P DF + IG +V RD G+++
Sbjct: 27 SLYHDPALFEAELEKIFYRTWVWVAHDSEVRNPGDFKTTMIGRRPVIVVRDKKGQVNVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G +D + E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEDILDKAELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ + A + +++ ++LGG+ + + G + ++T
Sbjct: 147 VESYAGMIF------ASYDADIEP---LEDFLGGARHWMDLFMKQGAGFPIKVQGEHKFT 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSWMSSV 226
>gi|339485245|ref|YP_004699773.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida S16]
gi|338836088|gb|AEJ10893.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida S16]
Length = 430
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++ +
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|41410413|ref|NP_963249.1| hypothetical protein MAP4315 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41399247|gb|AAS06865.1| hypothetical protein MAP_4315 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 448
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y P+F ALE+ R++ R WQ+ D + P D+F R G ++ R D+G + A
Sbjct: 28 PAERYYSPAFAALEVERMWPRVWQLACMVDHVAAPGDYFEYRCGPYGVLIVRGDDGALRA 87
Query: 94 FHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F NVCRH + L +GSG C YHGWT+ L G L + G + ++ L+P
Sbjct: 88 FQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGTLRLSDYPLIPA 147
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V TW V +N+ +A+ E+L E + +D + C T+E
Sbjct: 148 RVDTWAGLVFVNLDPDAMPLP---------EYLEAIPEDTAWCRLD---EFRCYATLTVE 195
Query: 213 --CNWKVFCDNYLDGGYHVPYAHKGL 236
NWK D Y + YH+ H L
Sbjct: 196 VDANWKTVADGYSE-TYHIQTLHPEL 220
>gi|418296477|ref|ZP_12908320.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538652|gb|EHH07894.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 414
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 159/373 (42%), Gaps = 42/373 (11%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W VG+ +++ +F+ ++G V+ R +G+I AFHN
Sbjct: 24 FYTDPDYFKLDMETIWYRDWLFVGHDCEVQKSGSYFTVQVGAYSVVIVRGRDGQIRAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G+ + VCPYH WTY LDG LL A + ++F+ +FGL P+
Sbjct: 84 SCRHRGSRVCTTQKGQSARLVCPYHQWTYDLDGKLLFARHMG--EEFDKGDFGLKPVACE 141
Query: 156 TWGPFVLLNMGKEAVH----QEEVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE- 208
T +V + + + ++EV+S + + W + E I + L + RE
Sbjct: 142 TVAGYVFICLADQPADFEPMRKEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNREC 201
Query: 209 YTIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYEK 252
Y N C Y DGG P GL S ++D +
Sbjct: 202 YHCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVAR 261
Query: 253 VS-IQRCESGSTEGTDDTHRLGSK--------AIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+ I ES + G R S+ A+ F YP + G + V+PL+
Sbjct: 262 MPLIGEAESYTMSGKRAVRRPLSEDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPLS 321
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
T V + + KD ++ L+D V E D + E G+ SPAY G
Sbjct: 322 ATETMVTTKWLVH---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYEPG 378
Query: 360 RYAPSVEQTMYHF 372
Y+ E + F
Sbjct: 379 PYSMEDEGGVMQF 391
>gi|325273172|ref|ZP_08139464.1| Rieske (2Fe-2S) domain protein [Pseudomonas sp. TJI-51]
gi|324101696|gb|EGB99250.1| Rieske (2Fe-2S) domain protein [Pseudomonas sp. TJI-51]
Length = 430
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++ +
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAQ 167
>gi|417748657|ref|ZP_12397092.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium
subsp. paratuberculosis S397]
gi|336459781|gb|EGO38695.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium
subsp. paratuberculosis S397]
Length = 448
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y P+F ALE+ R++ R WQ+ D + P D+F R G ++ R D+G + A
Sbjct: 28 PAERYYSPAFAALEVERMWPRVWQLACMVDHVAAPGDYFEYRCGPYGVLIVRGDDGALRA 87
Query: 94 FHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F NVCRH + L +GSG C YHGWT+ L G L + G + ++ L+P
Sbjct: 88 FQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGTLRLSDYPLIPA 147
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V TW V +N+ +A+ E+L E + +D + C T+E
Sbjct: 148 RVDTWAGLVFVNLDPDAMPLP---------EYLEAIPEDTAWCRLD---EFRCYATLTVE 195
Query: 213 --CNWKVFCDNYLDGGYHVPYAHKGL 236
NWK D Y + YH+ H L
Sbjct: 196 VDANWKTVADGYSE-TYHIQTLHPEL 220
>gi|254509992|ref|ZP_05122059.1| hypothetical protein RKLH11_524 [Rhodobacteraceae bacterium KLH11]
gi|221533703|gb|EEE36691.1| hypothetical protein RKLH11_524 [Rhodobacteraceae bacterium KLH11]
Length = 394
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 158/385 (41%), Gaps = 62/385 (16%)
Query: 23 PQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFV 82
P +P + P Y S+ E + +F W G T +P DF + G +
Sbjct: 5 PALPDQPRQRLPRDAYVSDSWFETEQNTLFSNCWTFAGVTMDFAEPGDFRVIKAGVCSLI 64
Query: 83 VCRDDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTL--LKATRITGI 139
V R++ G++ AFHN CRH + L G G VCPYH W YGLDG L + A R
Sbjct: 65 VIRNNTGELRAFHNQCRHRGTELLEGCGNAGKTIVCPYHNWVYGLDGALRGVPAQRAC-F 123
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
D + K L V + V ++ E D N ++WLG ++ + + S
Sbjct: 124 ADLDKKTTALFGASVGIFRNLVFVH--------PEPDQNF--DDWLGDLHQVPWPHDLAS 173
Query: 200 SLSYLCRREYTIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQR 257
+ + T E CNWKVF +N +D GYH+ Y HK G ++ +L+E V Q
Sbjct: 174 ADMQENPDDVTYEMNCNWKVFYENAVD-GYHLAYLHKDTLGG---PTHDKNLWE-VFGQN 228
Query: 258 CESGSTEGTDDTHRL-----------GSKAIYA----------FIYPNFMI--NRYGPWM 294
STE HR+ G K + A ++P ++ N +G +
Sbjct: 229 MVWWSTEREGVKHRIPQFVENAARGSGLKTVQAADIPGYGGVYMLFPTTILTPNPWGFSI 288
Query: 295 DTNLVIPLAPTRCKV-----------------VFDYFLDGSLKDDKAFIEQSLKDSEQVQ 337
T + TR +V + Y + L + + L+ + Q
Sbjct: 289 STMEPVNAGTTRLRVRNWSPKGWLTYTHRAADIPGYDKETGLIKSSHWTQHPLETGD-FQ 347
Query: 338 MEDIILCEGVQRGLESPAYCSGRYA 362
EDI +CE +QR L+SP + G A
Sbjct: 348 TEDIWVCEKMQRALQSPRFKVGPLA 372
>gi|386009973|ref|YP_005928250.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
BIRD-1]
gi|397696304|ref|YP_006534187.1| hypothetical protein T1E_3557 [Pseudomonas putida DOT-T1E]
gi|313496679|gb|ADR58045.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida BIRD-1]
gi|397333034|gb|AFO49393.1| Rieske [Pseudomonas putida DOT-T1E]
Length = 430
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++ +
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|317146827|ref|XP_001821695.2| Rieske 2Fe-2S family protein [Aspergillus oryzae RIB40]
Length = 382
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 147/356 (41%), Gaps = 49/356 (13%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P KAL PSSWY + ALE +F + W VV + + D+ + + + +
Sbjct: 20 PQTKAL--PSSWYRSEALYALERRAIFSKKWMVVTHRTRFTKTGDYVQLNVAGYGYFIIK 77
Query: 86 DDNGKIHAFHNVCRHHA--SILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
D G I AFHNVCRH A I + G SG + C YHGW+YGLDG L KA R ++ F
Sbjct: 78 DRTGTIRAFHNVCRHRAYPVIQSEGESGTANIISCKYHGWSYGLDGKLAKAPRYQDVEGF 137
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSL 201
++ GL P+ V + ++G V+ E D V+ E G + + G D S
Sbjct: 138 EKEKMGLYPIHVH------IDHLGFVWVNLEAGDRPSVSWEEDFEGVDQQPRLQGFDLS- 190
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
+Y + W V + L Y A G D
Sbjct: 191 ------QYHFDHTWSVNAISDLSKYYVETKA--GHIQHFNADK----------------- 225
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD-YFLDGSLK 320
DT LG F +PN I + +P++ T+ ++ +D Y + +
Sbjct: 226 -----QDTPGLG--IFSTFYFPNASITVSPSFWYMMRCLPVSATQTRMEYDVYRHNNASN 278
Query: 321 DDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+D +I++ K QV ED LC Q+ L + + +G P E+ +F +
Sbjct: 279 EDFTYIDEFFK---QVLREDKDLCNAAQKNLNAGVFVNGELHPRAEKGPLYFQKTV 331
>gi|26987057|ref|NP_742482.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
KT2440]
gi|24981679|gb|AAN65946.1|AE016222_8 Rieske 2Fe-2S family protein [Pseudomonas putida KT2440]
Length = 430
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++ +
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|209550888|ref|YP_002282805.1| Rieske (2Fe-2S) domain-containing protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209536644|gb|ACI56579.1| Rieske (2Fe-2S) domain protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 408
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 24/255 (9%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y DP +L RVF R W + + + P DF R+ + ++ R +G IHA N
Sbjct: 31 FYMDPDIYERDLERVFRRHWHCLAHESVVPKPNDFEVFRMASEQVILTRHADGTIHALLN 90
Query: 97 VCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
VCRH A + G FVCPYH WTYG DG+ LKA R+ KDF +++GL L V
Sbjct: 91 VCRHRGAEVCTRDKGNARVFVCPYHAWTYGNDGS-LKAARLMP-KDFKREDYGLKTLHVR 148
Query: 156 TWGPFVLLNMGKEAVHQEEVDS--NVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
+ ++ E + EV++ + ++ G +++ R+ Y ++
Sbjct: 149 VVEGLIFISFADEPLDFSEVENLLHATCGQYGWGQAKVAH------------RQTYPVDA 196
Query: 214 NWKVFCDNYLD----GGYHVPYA--HKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK+ +NY++ G H Y+ H +++ + S+ E+ E GS +
Sbjct: 197 NWKLAVENYVECYHCGPAHPEYSQTHALEQPAHMIEALNASMEERTRALGIEVGSGDRWQ 256
Query: 268 DTHRLGSKAIYAFIY 282
+ + +AI+AF Y
Sbjct: 257 TSAK-SREAIHAFRY 270
>gi|296392270|ref|ZP_06881745.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa PAb1]
gi|416881799|ref|ZP_11921706.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa 152504]
gi|334835573|gb|EGM14439.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
aeruginosa 152504]
Length = 429
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 2/135 (1%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D ++ +F++ W + G T ++ +F + +IG+ +V R G++HA
Sbjct: 34 PQPFYCDQRLFETDMQEIFHKEWLIAGMTCEIPAKGNFLTLQIGKNPVLVIRGAEGQVHA 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++KE+GL P+
Sbjct: 94 FHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKEYGLKPI 152
Query: 153 EVATWGPFVLLNMGK 167
+V T G ++ +++ +
Sbjct: 153 QVKTAGGYIFISLAE 167
>gi|170724049|ref|YP_001751737.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida W619]
gi|169762052|gb|ACA75368.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida W619]
Length = 430
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVVRGS 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VC YH WTY LDG LL A G DF++KE
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKE 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|315505148|ref|YP_004084035.1| rieske (2fe-2S) iron-sulfur domain-containing protein
[Micromonospora sp. L5]
gi|315411767|gb|ADU09884.1| Rieske (2Fe-2S) iron-sulfur domain protein [Micromonospora sp. L5]
Length = 401
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +T P LEL R+F RSW +V DQL P D+ + I ++ RD G ++A
Sbjct: 32 PPRAFTSPELYELELDRIFRRSWIMVARVDQLAGPGDYLALTIAGEPLLLTRDRTGTLNA 91
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
+CRH ++A G+G+ F CPYH W YGLDG L+ AT + G F+ L
Sbjct: 92 MSPICRHRMMPVVAAGAGRAEHFTCPYHLWRYGLDGQLIAATHMRGNPAFDPGSCRLPGF 151
Query: 153 EVATWGPFVLLNMGKEA----VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
V W FV +N+ A H + ++ G+ E+ ++ + S +
Sbjct: 152 AVEQWQGFVFVNLDSGAPPLRTHLSRIGEDL-------GNYELGAMTQVGSFVE------ 198
Query: 209 YTIECNWKVFCDNYLDGGYHV 229
CNWKV +N + YHV
Sbjct: 199 -DWHCNWKVAVENVHE-NYHV 217
>gi|359781194|ref|ZP_09284419.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
psychrotolerans L19]
gi|359371254|gb|EHK71820.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
psychrotolerans L19]
Length = 432
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F + W + G T ++ +F + ++G+ +V R
Sbjct: 27 ERTYSLPQPFYNDERLFQIDMQEIFGKEWLIAGMTCEIPTKGNFITLQLGDNPILVVRGA 86
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VCPYH WTY LDG LL A G DFN+ +
Sbjct: 87 EGKVHAFHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFNMAD 145
Query: 147 FGLVPLEVATWGPFVLLNMGKE 168
F L P+ V T G ++ +++ E
Sbjct: 146 FNLKPIHVKTAGGYIFISLADE 167
>gi|302868476|ref|YP_003837113.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Micromonospora aurantiaca ATCC 27029]
gi|302571335|gb|ADL47537.1| Rieske (2Fe-2S) iron-sulphur domain [Micromonospora aurantiaca ATCC
27029]
Length = 401
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +T P LEL R+F RSW +V DQL P D+ + I ++ RD G ++A
Sbjct: 32 PPRAFTSPELYELELDRIFRRSWIMVARADQLAGPGDYLALTIAGEPLLLTRDRTGALNA 91
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
+CRH ++A G+G+ F CPYH W YGLDG L+ AT + G F+ L
Sbjct: 92 MSPICRHRMMPVVAAGAGRAEHFTCPYHLWRYGLDGQLIAATHMRGNPAFDPGTCRLPGF 151
Query: 153 EVATWGPFVLLNMGKEA----VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
V W FV +N+ A H + ++ G+ E+ ++ + S +
Sbjct: 152 AVEQWQGFVFVNLDSGAPPLRTHLSRIGEDL-------GNYELGAMTQVGSFVE------ 198
Query: 209 YTIECNWKVFCDNYLDGGYHV 229
CNWKV +N + YHV
Sbjct: 199 -DWHCNWKVAVENVHE-NYHV 217
>gi|162451572|ref|YP_001613939.1| hypothetical protein sce3300 [Sorangium cellulosum So ce56]
gi|161162154|emb|CAN93459.1| hypothetical protein sce3300 [Sorangium cellulosum So ce56]
Length = 380
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 142/369 (38%), Gaps = 36/369 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P+ Y D A E +F RSW VG D++ P ++ + VV R
Sbjct: 17 PLPSARPLPARAYWDEDVFAFEQAEIFGRSWLCVGREDEIARPGEWLLAPLTPAGVVVLR 76
Query: 86 DDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
+ +I AFHNVCRH A+ L G G+ + CPYHGWTY L G L A F+
Sbjct: 77 GADLEIRAFHNVCRHRAATLLDGPCGRLAHLECPYHGWTYELSGALRAAPHAP--PGFDR 134
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
GL+P F+ + + A E A WL G
Sbjct: 135 GAHGLLPARAGALFGFLFVTLDPGAPPLESAIGE--APPWLSRPGLRSLRRGRRV----- 187
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST---------------SL 249
EY + NWK+ +N+ + +H P H L D +
Sbjct: 188 ---EYEVAANWKLCVENFQE-SHHFPRVHPALERLTPCDDAVSWGRGGPWLGGVMDLAPG 243
Query: 250 YEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ VS + R + A ++P + + ++ T + P AP R V
Sbjct: 244 ADTVSTSAAPGARPLIVPEAER--RRVRDAMLFPGLLTSLQPDYLLTYRLAPRAPDRTLV 301
Query: 310 VFD-YFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+ D YF + K F + + V ED +CE QRG+ +P Y YA VE
Sbjct: 302 IADTYFHPAAFT--KGFDPGDVFTFWDAVNREDRAICERQQRGIRAPGYTPSTYA-MVED 358
Query: 368 TMYHFHSLL 376
++ F ++
Sbjct: 359 GVHAFDCIV 367
>gi|429210876|ref|ZP_19202042.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
sp. M1]
gi|428158290|gb|EKX04837.1| putative ring hydroxylating dioxygenase, alpha-subunit [Pseudomonas
sp. M1]
Length = 429
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D L++ +F + W + G T ++ +F + +IG+ +V R GKIHA
Sbjct: 34 PQPFYNDERLFKLDMQEIFQKEWLIAGMTCEIPAKGNFLTLQIGDNPVIVLRGAEGKIHA 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++K++ L P+
Sbjct: 94 FHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKDYSLKPV 152
Query: 153 EVATWGPFVLLNMGK 167
V T G ++ +++ +
Sbjct: 153 NVKTAGGYIFISLAE 167
>gi|393772605|ref|ZP_10361027.1| Rieske (2Fe-2S) domain-containing protein, partial [Novosphingobium
sp. Rr 2-17]
gi|392721952|gb|EIZ79395.1| Rieske (2Fe-2S) domain-containing protein, partial [Novosphingobium
sp. Rr 2-17]
Length = 376
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P+ +A+ P S YTDP F E +F + W VG + + +P D+F+ V+
Sbjct: 18 LPVNEAVMLPPSVYTDPDFFEFEKDAIFAKEWLCVGRKEWIPNPGDYFTSMHMGEPIVIV 77
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R + I + VC+H A ++A G G F+CPYH W Y L G L+ A + DF+
Sbjct: 78 RGRDNVIRSMSTVCQHRAMLVAEGHGNTRAFLCPYHHWAYSLTGDLIGAPAMERACDFDK 137
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
+ L +V W F+ +N ++D+ +A L +E+L+ + ++ + +
Sbjct: 138 TKIKLPQFQVEEWLGFLFINF--------DLDAPPLAPR-LEKVTEVLAPYDLGNADTSM 188
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKG 235
E T NWKV +N D GYH H G
Sbjct: 189 DLDEQTFPWNWKVMFENNND-GYHANRLHAG 218
>gi|421525034|ref|ZP_15971655.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
gi|402751497|gb|EJX12010.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
Length = 430
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VC YH WTY LDG LL A G DF++KE
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKE 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|346322195|gb|EGX91794.1| iron-sulfur cluster-binding protein, rieske family domain protein
[Cordyceps militaris CM01]
Length = 386
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 149/354 (42%), Gaps = 38/354 (10%)
Query: 46 LELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHA-SI 104
LE +F + W +V + + D + F + RD G I A HN+CRH A I
Sbjct: 4 LERRAIFSKKWLLVTHKLRFPDTGSYVKITETGYTFFLVRDRQGAIRAHHNICRHRAYPI 63
Query: 105 LATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV---ATWGPFV 161
+ SGK S C YHGW+YG DG L KA + + FN +E GL + V A +V
Sbjct: 64 VEKESGKASILACKYHGWSYGFDGHLAKAPKYQEVPAFNKEENGLYRIHVHVDALGFVYV 123
Query: 162 LLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDN 221
L+ G+ E D V + +L + + +Y E T + NWKV DN
Sbjct: 124 NLDAGETPAVSWEQDFATVDEQ-----PRLLKFDM--TKYTYDHSWEMTGDYNWKVLADN 176
Query: 222 YLDGG--YHVPYAHKGLASGLQLDSY----STSLYEKVSIQRCESGSTEGTDDTHRLGSK 275
Y + YH P H L + L Y + + + ++ R ++ + LG+
Sbjct: 177 YNEASVCYHCPTGHPALPAVTDLSKYWVETAGTHIQHYAVDRADAAAKS-------LGNV 229
Query: 276 AIYAFIYPNFMINRYGPWMDTNLV-----IPLAPTRCKVVFDYFLDGSLKDDKAFIEQS- 329
+ Y YPN G + +P++ T+ + ++ + + AF E S
Sbjct: 230 STY--YYPNASSTVTGTKKRPHFFFIQRCVPISATQTHMEYEVYRNAE-SSAAAFTEISD 286
Query: 330 -LKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLTN 382
KD + ED LC G Q+ L + + +G P E+ F +L NL N
Sbjct: 287 FFKD---IMREDKELCNGAQKNLNAGIFLNGELHPRAEKGPL-FFQMLTRNLVN 336
>gi|254282621|ref|ZP_04957589.1| hypothetical protein NOR51B_1118 [gamma proteobacterium NOR51-B]
gi|219678824|gb|EED35173.1| hypothetical protein NOR51B_1118 [gamma proteobacterium NOR51-B]
Length = 372
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 133/328 (40%), Gaps = 22/328 (6%)
Query: 33 PPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIH 92
PP ++Y DP+ E +F SWQ DQL D +G +G VV R +G++H
Sbjct: 29 PPHTYY-DPNVYEFEAKAIFSNSWQYFAPLDQLSTEGDVVAGLVGNSSVVVTRAKDGELH 87
Query: 93 AFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
F N+CRH ++ + C YH W+Y L G L+ A F+ + L P
Sbjct: 88 GFLNICRHRGYPVVEKEQSRCRVLRCAYHSWSYDLTGNLVGAPDTESETHFDKSDSSLFP 147
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSSEILSINGIDSSLSYLCRRE 208
+ V TWG V +N A ++ VA E L SS+ +Y E
Sbjct: 148 VAVDTWGSLVFVNPDPNAAPLRVTHPHMTQWVAEEGLDDSSD---------RYTYRVGLE 198
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHK---GLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
NWK++ DN + YH H A + YS ++++I + E
Sbjct: 199 VNQGSNWKLWQDNNYE-CYHCLTLHSESLSKAFATKDGDYSLRYTDRMTISHYKGFEPEN 257
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF 325
+DD G + +P I + M VIP P C V YF+D + +D+
Sbjct: 258 SDDLS--GGDQLVLHFFPGCSIVQQNDLMLVLQVIPTGPESCCVRQHYFIDKGVPEDR-- 313
Query: 326 IEQSLKDSEQVQMEDIILCEGVQRGLES 353
+ + +Q ED E QR L +
Sbjct: 314 FNRWVDLYKQTFNEDGEAAEKQQRNLRT 341
>gi|395650657|ref|ZP_10438507.1| putative iron/sulfur-binding protein [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 431
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYTDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPVIVLRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L A+ GK + VCPYH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCASEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLL 163
+GL P+ V T G ++ +
Sbjct: 147 YGLKPVNVKTSGGYIFI 163
>gi|148545591|ref|YP_001265693.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida F1]
gi|148509649|gb|ABQ76509.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida F1]
Length = 430
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VC YH WTY LDG LL A G DF++KE
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKE 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|406707555|ref|YP_006757907.1| Rieske-type iron-sulfur protein [alpha proteobacterium HIMB59]
gi|406653331|gb|AFS48730.1| Rieske-type iron-sulfur protein [alpha proteobacterium HIMB59]
Length = 397
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 167/381 (43%), Gaps = 37/381 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ-----DFFSGRIGEVE 80
PI +A P+ +Y P +E +F + W VG+ L P ++F+ +
Sbjct: 28 PIHQAHGVPNEYYIRPECFEMEGEHLFNKGWFAVGFVKDLPQPGSAIPVNYFNNPL---- 83
Query: 81 FVVCRDDNGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI 139
+V + KI F NVCRH IL + K CPYH W Y G ++ I G
Sbjct: 84 LIVKSKQDEKIRVFQNVCRHRGMILIEEPTVLKGAIRCPYHSWCYKQTGEVVATPHIGGP 143
Query: 140 -----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ E L+ + W + +N A EEV ++ + W + S
Sbjct: 144 GYNYHSGIDKSELSLLEVRSHIWRDVIFVNPDGMAPPFEEVHRPLL-DRWSVFEQPMYS- 201
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY---- 250
+ DS+ + + NWK+ +NYL+ YH+P+ H GL S +L+ + +
Sbjct: 202 DMSDSAF------KLEVNGNWKLAVENYLES-YHLPWVHPGLNSYSKLEDHENIVKYGHY 254
Query: 251 -EKVSIQRCESGST-EGTDDTHRLG----SKAIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
++S + +T + DD LG +K Y ++PN ++ + ++ PLAP
Sbjct: 255 SGQISYKYIPQYTTGKQFDDFKNLGPEWDTKGEYIVLFPNLVLGVQKDHIFNLIIEPLAP 314
Query: 305 TRCKVVFD-YFLDGSLKDD--KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ + + Y+ D ++ D K +++ K + V EDI + EG+Q+G + + GR+
Sbjct: 315 NKIREHIELYYSDPAMLADEYKETRQENAKLWKTVFEEDIFVVEGMQKGRYAKGFDGGRF 374
Query: 362 APSVEQTMYHFHSLLHCNLTN 382
+P +++ + FH + N
Sbjct: 375 SPVMDEPTHVFHDWYARKILN 395
>gi|395446686|ref|YP_006386939.1| Rieske domain-containing protein [Pseudomonas putida ND6]
gi|388560683|gb|AFK69824.1| Rieske domain-containing protein [Pseudomonas putida ND6]
Length = 459
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 57 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVIRGA 116
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VC YH WTY LDG LL A G DF++KE
Sbjct: 117 EGKVHAFHNVCRHRGSRLCVSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKE 175
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 176 YGLKPVNVKVAGGYIFISLAE 196
>gi|296167174|ref|ZP_06849581.1| Rieske (2Fe-2S) domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897496|gb|EFG77095.1| Rieske (2Fe-2S) domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 451
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P ++ P+ Y P+F ALE+ R++ + WQ+ D + +P D+F R G ++ R
Sbjct: 23 PPDRPTLVPAERYYSPAFAALEVKRMWPKVWQLACMVDHVAEPGDYFEYRCGPYGVLIVR 82
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D+G + AF N CRH + + GSG C YHGWT+ L GTL + G +
Sbjct: 83 GDDGVLRAFQNACRHRGNSVCVGSGSGLRELKCGYHGWTWDLAGTLKRVPNRKGFGSLQL 142
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
+F LVP+ V +W V +N+ EA+ E + + +++
Sbjct: 143 SDFPLVPVRVDSWEGLVFVNLDPEAMPLLEY------------------LEAVPDDIAWC 184
Query: 205 CRREYT--------IECNWKVFCDNYLDGGYHVPYAHKGL 236
R++ +E NWK D Y + YH+ H L
Sbjct: 185 RLRDFRCYATLTVEVEANWKTIADGYSE-TYHIQTLHPEL 223
>gi|422682453|ref|ZP_16740719.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|331011793|gb|EGH91849.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 432
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++G+
Sbjct: 147 FGLKPVHVKTAGGYIFISLGE 167
>gi|440777736|ref|ZP_20956528.1| hypothetical protein D522_13268 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436721973|gb|ELP46014.1| hypothetical protein D522_13268 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 448
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y P+F ALE+ R++ R WQ D + P D+F R G ++ R D+G + A
Sbjct: 28 PAERYYSPAFAALEVERMWPRVWQPACMVDHVAAPGDYFEYRCGPYGVLIVRGDDGALRA 87
Query: 94 FHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F NVCRH + L +GSG C YHGWT+ L G L + G + ++ L+P
Sbjct: 88 FQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGTLRLSDYPLIPA 147
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V TW V +N+ +A+ E+L E + +D + C T+E
Sbjct: 148 RVDTWAGLVFVNLDPDAMPLP---------EYLEAIPEDTAWCRLD---EFRCYATLTVE 195
Query: 213 --CNWKVFCDNYLDGGYHVPYAHKGL 236
NWK D Y + YH+ H L
Sbjct: 196 VDANWKTVADGYSE-TYHIQTLHPEL 220
>gi|346992892|ref|ZP_08860964.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases large terminal subunit [Ruegeria sp. TW15]
Length = 363
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 147/358 (41%), Gaps = 33/358 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y F E V ++W VG+ Q+ +P D + + R G I FHNV
Sbjct: 23 YRSEEFWQRECQTVLAKNWVFVGFAHQMSNPGDAQPITCAGLPLLAVRGRGGDIQVFHNV 82
Query: 98 CRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITG-----IKDFNVKEFGLVP 151
C H L + CPYH W Y LDG L A G F++KE L P
Sbjct: 83 CLHRCMTLVDRPKNVGKLIRCPYHAWAYDLDGRLRAAPHFAGTGKQEFDGFDIKEHRLKP 142
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREY- 209
+ W ++ +N+ A E+ + ++ ++G+D S L + E+
Sbjct: 143 VRTHVWHDWIFVNLDGNAPEFEDYAAPLIDQ-----------LSGMDYSKLEPIGLLEFG 191
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS----TSLYEKVSIQRCESGSTEG 265
I+ NWK+ +N+++ YHV + H D Y+ T + V ++ E T G
Sbjct: 192 EIDTNWKLIMENFIE-PYHVQFVHSSTTDQPLEDHYTIIDGTCIGSAVDLE--EELGTSG 248
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYGP-WMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKA 324
+ LG + Y +YPNF++ RY P + L +P+ P + + + K
Sbjct: 249 S-----LGVSSRYLTLYPNFILGRYFPDQLGVYLNVPIGPGKMRQYRALYTTEGQKLSAE 303
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESP-AYCSGRYAPSVEQTMYHFHSLLHCNLT 381
IE V ED + E + G +SP A G +P+ E ++ F L+ ++
Sbjct: 304 EIEALRNLWWDVHKEDHEMVERMFEGRKSPVAEDGGLLSPAWEDSVRAFQDLIERDVA 361
>gi|374609311|ref|ZP_09682107.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mycobacterium tusciae
JS617]
gi|373552280|gb|EHP78890.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mycobacterium tusciae
JS617]
Length = 385
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 151/365 (41%), Gaps = 32/365 (8%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P ++ P Y DP+ A E +F W VG+ L + ++ R
Sbjct: 21 PFGQSRMLPREAYVDPTVFAWEQRHIF-SGWSCVGHASDLAGVGAQKAVGTAPNTTLLVR 79
Query: 86 DDNGKIHAFHNVCRH--HASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
++ I AF N CRH H + K VCPYH W+Y LDG L A ++ F+
Sbjct: 80 AEDDVIRAFANTCRHRGHELLACNTVTKGRGVVCPYHSWSYRLDGRLRNAPGFGDVEGFD 139
Query: 144 VKEFGLVPLEVATWGPFVLLN-MGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
EFGL L + W ++ ++ G++A + V G E++ + L+
Sbjct: 140 RDEFGLAELRLVNWHGWLFVDPSGQDAEFADHV----------AGLDEVVGPYH-PADLT 188
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLA------SGLQLDSYSTSLYEKVSI- 255
+ R Y + NWKV +NY + YH H L+ SG L+ T + +SI
Sbjct: 189 IVARHSYELATNWKVIAENYQE-CYHCSTIHPELSRISPPTSGENLELKGTWMGGWMSIV 247
Query: 256 QRCESGSTEGTDD---THRLGSK----AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+ E+ S G LG + +Y YPN +++ + ++ T+L+ PLA R
Sbjct: 248 EGAETMSLSGKSGGVAIAGLGERELRSVMYLVGYPNLLVSLHPDYVMTHLMTPLAADRTH 307
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
V + + F D + +D CE VQRGL SP G AP E
Sbjct: 308 VECAWAFPKDVAATPGFDPSYAVDFWDLTNRQDWAACESVQRGLTSPHARPGPLAPD-ED 366
Query: 368 TMYHF 372
+Y F
Sbjct: 367 GVYQF 371
>gi|291300261|ref|YP_003511539.1| Rieske (2Fe-2S) domain-containing protein [Stackebrandtia
nassauensis DSM 44728]
gi|290569481|gb|ADD42446.1| Rieske (2Fe-2S) domain protein [Stackebrandtia nassauensis DSM
44728]
Length = 398
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 163/403 (40%), Gaps = 69/403 (17%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P ++Y+ + E +F +WQ G D P F S + G VV RD G + A
Sbjct: 11 PETYYSR-EWFDREQAELFGDTWQFAGMADDYGPPGAFQSVQAGRHPLVVLRDGEGVLRA 69
Query: 94 FHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF-NVKEFGLVP 151
FHN+CRH A++L K VCPYH WTYGLDG LL + + + GL P
Sbjct: 70 FHNLCRHRGAAVLPQSGVVKRAIVCPYHNWTYGLDGCLLATPQRKELDPAPDRSTLGLHP 129
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG-SSEILSINGIDSSLSYLCRRE-Y 209
+A W G VH + + +EWL + ++ ++ L+ E +
Sbjct: 130 AGLAQW-------QGMLFVHPDPAAQPL--DEWLADLPQRVAPVDPLE--LTEPGEPEVH 178
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHK-GLA-------SGLQLDSYSTSLYEK------VSI 255
++CNWK+F +N LD YH+ Y H+ LA Q + S YE +
Sbjct: 179 HLKCNWKIFMENALD-NYHLGYVHRDNLAEYDHKRQEQHQCGQWHWSFYEPPKKPGHMPP 237
Query: 256 QRCESGSTEGTDDTHRLGSKAIYAFIYPN-FMINRYGPWMDTNLVIPLAPT---RCKVVF 311
+G D GS + I+PN F++ W+ ++ A T R +
Sbjct: 238 SEVRAGLRPIHIDPRWYGSS--FGMIFPNTFVLTGPTFWVSVEVIPTGAETTTVRLRARV 295
Query: 312 DYFLDGSLKDD------------------------------KAFIEQSLKDSEQ--VQME 339
+G+L +A I ++ +D + V E
Sbjct: 296 AAGQNGALARGLVTEAAARVFRPIRSLAGGMVSAIRTRSSVRAAIRKASQDQRRYTVVEE 355
Query: 340 DIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLTN 382
D+ CE +QRG+ SP + G AP +E+ + F + LT
Sbjct: 356 DVFCCEALQRGIRSPRFSIGPVAPRLERGVLTFQQNVRDYLTG 398
>gi|453328699|dbj|GAC89050.1| ring hydroxylating dioxygenase subunit alpha [Gluconobacter
thailandicus NBRC 3255]
Length = 421
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
S Y+DP +E+ R+F +W V + L +P DF + +G +V RD G +H
Sbjct: 18 GSIYSDPDLYDMEMDRIFMHNWIWVAHKSDLPEPGDFITTFVGSHPVIVSRDRKGAVHVM 77
Query: 95 HNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG-IKDFNVKEFGLVPL 152
N CRH A++ GK + FVCPYHGW YGLDG L G + + LV L
Sbjct: 78 LNRCRHRAATVCELKHGKTASFVCPYHGWAYGLDGALRGVPHQDGYTGQLDKSKLPLVAL 137
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREY 209
V + + KE + + WLG + ++ G + + ++
Sbjct: 138 RVEEYNGLIFATFDKEIMS---------LDAWLGRAKPWIDLFMKQGAGWPVKTMGEHKF 188
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
T NWK+ +N D YH P HK + ++ +T
Sbjct: 189 TFPGNWKIQLENTTD-AYHFPIVHKSFLDSVDQETQNT 225
>gi|374619261|ref|ZP_09691795.1| ring-hydroxylating dioxygenase, large terminal subunit [gamma
proteobacterium HIMB55]
gi|374302488|gb|EHQ56672.1| ring-hydroxylating dioxygenase, large terminal subunit [gamma
proteobacterium HIMB55]
Length = 420
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 47 ELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHH-ASIL 105
EL + ++SW ++ ++ D+ IGE +V R D+G+I A HN+CRH A +
Sbjct: 44 ELDHLVFKSWLYALHSSEIPAKGDYQLVEIGEDSIIVVRGDDGEIRAMHNICRHRGAQVC 103
Query: 106 ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNM 165
+G K FVCPYHGW Y LDG+L A I DF+ GL P+ + V +N
Sbjct: 104 EAAAGNKRTFVCPYHGWVYNLDGSLKAARETHVISDFDTAAHGLKPVRCVEYMGLVFIN- 162
Query: 166 GKEAVHQEEVDSNVVANEWLGGSSEILS-INGIDSSLSYLCRRE-YTIECNWKVFCDNYL 223
D N A ++LG I + D + + + R+ Y I+ NWK+ +NYL
Sbjct: 163 ---------CDPN--AADFLGPLENIREPLGAYDLANAKVAHRQTYKIDANWKLVLENYL 211
Query: 224 DGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ YH +H+ A +L ++ L+EKV+
Sbjct: 212 E-CYHCATSHRAYA---KLHTFK-DLHEKVA 237
>gi|255262858|ref|ZP_05342200.1| rieske domain protein [Thalassiobium sp. R2A62]
gi|255105193|gb|EET47867.1| rieske domain protein [Thalassiobium sp. R2A62]
Length = 384
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 37/370 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E A P++ Y D + E H + + SW + + + +D V ++ R
Sbjct: 16 PLETANGLPNAHYIDDAVFQEEKHAILFDSWTGLAVASDVPEARDAKPIEFLGVPLLLIR 75
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
G++ F N+CRH IL K + CPYH W Y G L+ + G
Sbjct: 76 SREGEVRVFQNICRHRGMILVDAPRKIEGAIRCPYHSWCYSTAGKLVSTPHVGGPGHNTH 135
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+ + GL + W V +N+ A E V+++++ + W + G DS
Sbjct: 136 EAIKKDDLGLTEIASYIWRDIVFVNISGTAEPFEVVNADLM-DRW-KEFDQPHHHGGEDS 193
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQRC 258
R + ++ NWK+ +NY + YH+P+ H GL S +L D Y K S Q
Sbjct: 194 ------RFDLDVQTNWKLAVENYSES-YHLPWVHPGLNSYSRLEDHYHIDEKGKFSGQGT 246
Query: 259 --------ESGST--EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
++G T + T+ + A Y ++PN ++ G D I L P +
Sbjct: 247 LVYRQLTDDAGQTLPDFTELSEFWNEGAEYITVFPNVLM---GAQRDHAFAIILEPKSTQ 303
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDS-----EQVQMEDIILCEGVQRGLESPAYCSGRYAP 363
++ L A I+Q L+ ++V EDI + EG+Q+G +P + GR++P
Sbjct: 304 QTIEHV---HLYYASATIDQGLRIKNATLWKEVFEEDIFVVEGMQKGRHAPHFNGGRFSP 360
Query: 364 SVEQTMYHFH 373
+++ + FH
Sbjct: 361 AMDGPTHCFH 370
>gi|409405103|ref|ZP_11253576.1| phenylpropionate dioxygenase large terminal subunit [Herbaspirillum
sp. GW103]
gi|386435870|gb|EIJ48694.1| phenylpropionate dioxygenase large terminal subunit [Herbaspirillum
sp. GW103]
Length = 428
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
++ A+ PS YTDP+ E+ ++FY++W V + ++++P DF + +IG +V RD
Sbjct: 20 VQDAVVDPS-LYTDPAIFEAEMDKIFYKTWIWVAHESEIRNPGDFKTAQIGRQPVIVVRD 78
Query: 87 DNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
GK++ N CRH A++ G + F CPYH W+YGLDG L G ++ K
Sbjct: 79 KTGKVNVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRGLPYPEGYEEVIEK 138
Query: 146 -EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVV--ANEWLGGSSEILSINGIDSSLS 202
+ L L ++ + + +E E S+ + A +W+ ++ G +
Sbjct: 139 ADLPLQSLRAESYNGMIFASFNQEI----EPLSDFLGHAKKWI----DLFMKQGAGFPIK 190
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+++ + NWK+ +N D GYH P HK S +
Sbjct: 191 VQGEHKFSFKGNWKIQLENTTD-GYHFPVVHKTFLSSV 227
>gi|398350473|ref|YP_006395937.1| anthranilate 1,2-dioxygenase large subunit [Sinorhizobium fredii
USDA 257]
gi|390125799|gb|AFL49180.1| anthranilate 1,2-dioxygenase large subunit [Sinorhizobium fredii
USDA 257]
Length = 416
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 159/374 (42%), Gaps = 42/374 (11%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP + +L ++Y+ W VG+ ++ P ++F+ ++G+ V+ RD G + A H
Sbjct: 25 AFYIDPDYYRQDLEHIWYKDWLFVGHDCEIPRPGNYFTLQVGDYPIVIVRDRQGAVRALH 84
Query: 96 NVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + T G + VCPYH WTY LDG LL A ++ +DF+ + L P+
Sbjct: 85 NSCRHRGSRVCTQHKGSSAKLVCPYHQWTYELDGRLLFARQMP--EDFDPAQHSLKPVHC 142
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSS---EILSINGIDSSLSYLCRRE 208
T G ++ +++ ++ + + V +A LG + E + + L + RE
Sbjct: 143 ETVGGYIFVSLAEQPMDFQPFRDTVASYLAPHRLGETKVAYESTIVEKGNWKLVWENNRE 202
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVPY--AH------KGLASGLQLDSYSTSLYE 251
Y N C Y + G P AH GL S ++
Sbjct: 203 CYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWERCEAAGLPSAFRIGPTGQFRMT 262
Query: 252 KVS-IQRCESGSTEGTDDTHRLGSKAIYA--------FIYPNFMINRYGPWMDTNLVIPL 302
++ I R ES + G + S + A F YP + G T V+PL
Sbjct: 263 RMPLINRAESYTMSGEKAVRKELSAGVSAKGIGTLLLFHYPTTWNHILGDHAITFRVLPL 322
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCS 358
P +V + ++ KD ++ +L+D V E D + E G+ SPAY
Sbjct: 323 GPELTQVTTKWLVN---KDAVEGVDYTLEDLTHVWTETNDQDRQIVEENAFGIRSPAYEP 379
Query: 359 GRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 380 GPYSAEHEGGVMQF 393
>gi|407644855|ref|YP_006808614.1| dioxyenase [Nocardia brasiliensis ATCC 700358]
gi|407307739|gb|AFU01640.1| dioxyenase [Nocardia brasiliensis ATCC 700358]
Length = 383
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 162/390 (41%), Gaps = 41/390 (10%)
Query: 22 NPQIPIEKALTPP--SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEV 79
+P AL P WY D + A E ++F R W + L F ++G
Sbjct: 4 DPPPVTTPALIPTLGGKWYVDDAVFAAEQEQLFERMWFCAIRSADLAQAGRFKRVQVGRE 63
Query: 80 EFVVCRDDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRI 136
++ R +G + AF N+CRH ++L T G +++ CPYH WTYGLDG L+ A +
Sbjct: 64 SVLIVRGRDGALRAFLNICRHRGAMLCTEDEGQVRRN-LQCPYHAWTYGLDGRLVAAPNM 122
Query: 137 TGIK-----DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI 191
+K D + +GL+P+ + W + + + D V ++ +G +E
Sbjct: 123 AALKDATGADIDRVAYGLIPVALREWLGYAWVCLAD--------DPPVFEHDVVGAVTER 174
Query: 192 LS-INGIDS----SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS 246
L ID+ +L+ R Y + NWK+ +N+++ YH H L L ++
Sbjct: 175 LGDPAAIDAYEIETLAVGRRVVYDVAANWKLIVENFME-CYHCATIHPELTE--VLPEFA 231
Query: 247 TSLYEKVSI-QRCESG------STEGTDDTHRL------GSKAIYAF-IYPNFMINRYGP 292
L +V + E G + +G+ RL + +A I P +N
Sbjct: 232 QGLAAQVFVGHGAEFGAEIAGFTVDGSPGFDRLPGVTPEQDRRYFAITIRPTVFVNLVPD 291
Query: 293 WMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLE 352
+ + + P++ R V D+ + + +S++ +V +D CE Q +
Sbjct: 292 HIIFHRMFPMSADRTIVECDWLYTKDVVAAGRDVSRSVELFHRVNEQDFAACERTQPTMS 351
Query: 353 SPAYCSGRYAPSVEQTMYHFHSLLHCNLTN 382
S AY G E + FH L C + +
Sbjct: 352 SRAYRKGGVLVPAEHHIAEFHEWLSCRIGD 381
>gi|422648532|ref|ZP_16711654.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330962068|gb|EGH62328.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 432
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNFLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAQ 167
>gi|339487240|ref|YP_004701768.1| iron-sulfur cluster-binding protein, rieske family [Pseudomonas
putida S16]
gi|338838083|gb|AEJ12888.1| iron-sulfur cluster-binding protein, rieske family [Pseudomonas
putida S16]
Length = 410
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 164/396 (41%), Gaps = 40/396 (10%)
Query: 9 ENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
+N A L+ + PQ + P + Y DP+ +L ++Y+ W G+T +L+ P
Sbjct: 2 KNYTDALDLIKQRKPQHGL------PGTAYNDPALYQQDLEHIWYKEWIFAGHTFELEKP 55
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLD 127
++ + +IGE VV R +G + AFHN CRH S + T GK + VCPYH WT+ LD
Sbjct: 56 GEYLTLQIGEYPVVVVRGKDGGVRAFHNACRHRGSKVCTEAKGKVAKLVCPYHKWTFELD 115
Query: 128 GTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV---VANEW 184
G LL A + +FN + L P+ ++ + + + A E+ S V + +
Sbjct: 116 GKLLYAGNMG--PEFNPADHSLTPVHCEVVHSYIYVCVAQTAPDFEKFRSAVSPFIGPHY 173
Query: 185 LGGSSEILSINGIDS---SLSYLCRRE--------YTIECNWKVFCDNYLDGGYHVPY-- 231
L N ++ L + RE + C++ GG P
Sbjct: 174 LEDCKVAFESNLVEKGNWKLVFENNRECYHCDGTHPELLCSYTELLSVQGLGGAEDPVFA 233
Query: 232 ------AHKGLASGLQLDSYSTSLYEKVSIQRCESGST-EGTDDTHRLGSK-------AI 277
GLAS + +D ++ + S T +G R + A+
Sbjct: 234 EHCDTCEAAGLASRMVMDPNGQFRMTRIPLNPGASSYTMDGKPAVARRLDRSGVENIGAL 293
Query: 278 YAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF-IEQSLKDSEQV 336
F YP+ + G + V+P+ P V + + ++ + I++ K
Sbjct: 294 LYFNYPSTWNHFLGDHALSFRVLPVGPGETVVTTKWLVPKDAQEGVDYDIDRLTKVWIAT 353
Query: 337 QMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+D L EG Q G+ SPAY G Y+ ++E + F
Sbjct: 354 NDQDRRLVEGTQIGVTSPAYIPGPYSTTIENGVCQF 389
>gi|379762077|ref|YP_005348474.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-64]
gi|387876085|ref|YP_006306389.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp.
MOTT36Y]
gi|378810019|gb|AFC54153.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare MOTT-64]
gi|386789543|gb|AFJ35662.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium sp.
MOTT36Y]
Length = 450
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE ++ R WQ+ +++ P DF I + +V R DN + A
Sbjct: 17 PKQRYYDPEFYALEAEMLWPRMWQMACRLEEIPKPGDFVEYEILDQSVIVARVDNHTVRA 76
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH L G+G + FVCP+HGW +GLDG T + ++ + + LV
Sbjct: 77 YHNACRHRGVKLVEGNGNRRTFVCPFHGWCWGLDGHNTFVLRPEAFAEENLSADDLRLVA 136
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ WG +N+ +A +W+ + + +DS R E+
Sbjct: 137 VRCELWGGCAWINLDDDA---------PALRDWMEPFASVYDAWQVDS-----LRVEWWQ 182
Query: 212 EC----NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
C NWK+ +++ GYHVP H L Q + +++ V+
Sbjct: 183 SCRLPVNWKLAAAAFME-GYHVPQTHPQLLPSAQPGEVAATVHPVVA 228
>gi|13474255|ref|NP_105823.1| aromatic-ring hydroxylating dioxygenase alpha-subunit
[Mesorhizobium loti MAFF303099]
gi|14025007|dbj|BAB51609.1| probable aromatic-ring hydroxylating dioxygenase alpha-subunit
[Mesorhizobium loti MAFF303099]
Length = 415
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP F L++ ++YR W VG+ +L P F + +IG+ V+ RD G+I+AFHN
Sbjct: 24 FYTDPDFFKLDMELIWYRDWLFVGHDCELPKPGSFITVQIGDYPVVLVRDQQGRINAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G + VCPYH WTY LDG LL A ++ F+ +FGL P+
Sbjct: 84 SCRHRGSRVCNTDKGTAAKLVCPYHQWTYELDGRLLFARQMA--DGFDKSQFGLKPVACE 141
Query: 156 TWGPFVLLNMGKE 168
+ ++ + + KE
Sbjct: 142 SVAGYIFICLAKE 154
>gi|443471436|ref|ZP_21061503.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas
pseudoalcaligenes KF707]
gi|442901466|gb|ELS27332.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas
pseudoalcaligenes KF707]
Length = 429
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D +++ +F + W + G T ++ ++ + ++G+ +V R G+IHA
Sbjct: 34 PQPFYNDERLFQIDMQEIFLKEWLIAGMTCEIPAKGNYLTLQVGDNPIIVIRGAEGQIHA 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++K++GL P+
Sbjct: 94 FHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMKQYGLKPV 152
Query: 153 EVATWGPFVLLNMGK 167
V + G ++ +N+ +
Sbjct: 153 HVKSAGGYIFVNLSE 167
>gi|254390746|ref|ZP_05005959.1| rieske domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|197704446|gb|EDY50258.1| rieske domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 394
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 141/339 (41%), Gaps = 18/339 (5%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P + Y+ P A E VF W V + +L P DF + +G +V R+ G++
Sbjct: 34 TLPGAAYSSPEIFAREQEAVFENLWCCVLRSAELAAPGDFRTVTVGRESVLVLRNTAGEL 93
Query: 92 HAFHNVCRHHASILATG-SGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
AF NVC H + L G SG + C YH W+Y LDGTL+ A + + D + +GL
Sbjct: 94 RAFLNVCSHRGTRLCAGESGTVRRTLRCSYHAWSYDLDGTLVAAPNLARMPDLDRTAYGL 153
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
P+ + W + L + +E +E A E LG + I + L + R Y
Sbjct: 154 RPVALREWLGYTWLCLAEEPPSFDE-HVRGAATERLGDPAAIDRYDAEGLMLGHRVR--Y 210
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGST-----E 264
+ NWK+ +N+++ YH H L + L + KV +G+ +
Sbjct: 211 DVRANWKLLVENFME-CYHCSTIHPELVAVLPEFGGGYAAQTKVGQGASFAGAARGFTVD 269
Query: 265 GTDDTHRLGSKA-------IYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
G RL A + P IN + + + P A R V D+
Sbjct: 270 GGPGFERLPGLAEEQDRRYFAITVRPQVFINLVPDHVILHRMFPHAHDRTVVECDWLYAP 329
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY 356
+ A + S++ +V +D +CE Q G+ S AY
Sbjct: 330 DVVASGADLSHSVELFHRVNEQDFAVCERTQPGMASRAY 368
>gi|379747490|ref|YP_005338311.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
gi|378799854|gb|AFC43990.1| rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
Length = 450
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE ++ R WQ+ +++ P DF I + +V R DN + A
Sbjct: 17 PKQRYYDPEFYALEAEMLWPRMWQMACRLEEIPKPGDFVEYEILDQSVIVARVDNHTVRA 76
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH L G+G + FVCP+HGW +GLDG T + ++ + + LV
Sbjct: 77 YHNACRHRGVKLVEGNGNRRTFVCPFHGWCWGLDGHNTFVLRPEAFAEENLSADDLRLVA 136
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ WG +N+ +A +W+ + + +DS R E+
Sbjct: 137 VRCELWGGCAWINLDDDA---------PALRDWMEPFASVYDAWQVDS-----LRVEWWQ 182
Query: 212 EC----NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
C NWK+ +++ GYHVP H L Q + +++ V+
Sbjct: 183 SCRLPVNWKLAAAAFME-GYHVPQTHPQLLPSAQPGEVAATVHPVVA 228
>gi|213967826|ref|ZP_03395973.1| iron-sulfur cluster-binding protein, Rieske family protein
[Pseudomonas syringae pv. tomato T1]
gi|301382463|ref|ZP_07230881.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. tomato Max13]
gi|302061145|ref|ZP_07252686.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. tomato K40]
gi|302132062|ref|ZP_07258052.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213927602|gb|EEB61150.1| iron-sulfur cluster-binding protein, Rieske family protein
[Pseudomonas syringae pv. tomato T1]
Length = 432
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNFLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|398878709|ref|ZP_10633820.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM67]
gi|398198892|gb|EJM85843.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM67]
Length = 427
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD G I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKGNINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGAKHWMDLFMKQGAGFPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|424909614|ref|ZP_18332991.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845645|gb|EJA98167.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 414
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 157/373 (42%), Gaps = 42/373 (11%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W VG+ +++ +F+ +IG V+ R +G+I AFHN
Sbjct: 24 FYTDPDYFKLDMETIWYRDWLFVGHDCEVQKSGSYFTVQIGAYSVVIVRGRDGQIRAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G+ + VCPYH WTY LDG LL A + ++F+ +FGL P+
Sbjct: 84 SCRHRGSRVCTTQKGQSARLVCPYHQWTYDLDGKLLFARHMG--EEFDKGDFGLKPVACE 141
Query: 156 TWGPFVLLNMGKEAVHQE----EVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE- 208
T +V + + + E EV+S + + W + E I + L + RE
Sbjct: 142 TVAGYVFICLADQPADFEPMRAEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNREC 201
Query: 209 YTIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYEK 252
Y N C Y DGG P GL S ++D +
Sbjct: 202 YHCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVAR 261
Query: 253 VS-IQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+ I ES + G +DD A+ F YP + G + V+PL+
Sbjct: 262 MPLIGEAESYTMSGKRAVRRPLSDDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPLS 321
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
V + + KD ++ L+D V E D + E G+ SPAY G
Sbjct: 322 ANETMVTTKWLVH---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYEPG 378
Query: 360 RYAPSVEQTMYHF 372
Y+ E + F
Sbjct: 379 PYSMEDEGGVMQF 391
>gi|284991336|ref|YP_003409890.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Geodermatophilus obscurus DSM 43160]
gi|284064581|gb|ADB75519.1| Rieske (2Fe-2S) iron-sulphur domain protein [Geodermatophilus
obscurus DSM 43160]
Length = 403
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 20/372 (5%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q+P T P YTDP E ++F W V D+++ P + + +G V+
Sbjct: 6 QLPPSLIATLPGHSYTDPEIFQQEQAKIFETHWFAVARADEIEGPGSYRTVDVGRENVVL 65
Query: 84 CRDDNGKIHAFHNVCRHHAS---ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
R + + AF NVCRH + + +G+G + C YH WTY LDG L+ A + ++
Sbjct: 66 VRGRDKTLRAFLNVCRHRGARVCMEESGTGLRR-LRCGYHAWTYSLDGALVGAPNLAQME 124
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
D + ++GL+P+ + W + + + E+ VA GS E++ GID
Sbjct: 125 DVDRSQYGLIPVHLREWLGYAWVCIADVPPSFEDTVIGAVAGRL--GSPEVIDDWGID-K 181
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSYSTSLYE------K 252
L+ R Y ++ NWK+ +N+++ YH H L L D Y+ +
Sbjct: 182 LTVGRRITYDVKANWKLIIENFME-CYHCATIHPELTEVLPEFADGYAAQYFVGHGAEFG 240
Query: 253 VSIQRCESGSTEGTDDTHRLGS---KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCK 308
++Q +EG D + + YA + P IN + + + P+A R
Sbjct: 241 ENVQGFTVDGSEGLDHIPGVDGEHDRKYYAVTVNPQVFINLVPDHVIFHRMFPVAADRTV 300
Query: 309 VVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQT 368
V D+ + + + +S++ +V +D Q S Y G E
Sbjct: 301 VECDWLYMPHVVESGKDVSRSVELFHRVNEQDFDAAVRCQLASNSKGYAKGGVLVPSEHH 360
Query: 369 MYHFHSLLHCNL 380
+ FH + L
Sbjct: 361 IALFHEWVKLQL 372
>gi|28867631|ref|NP_790250.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae pv. tomato str. DC3000]
gi|28850866|gb|AAO53945.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 410
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 6 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNFLTLQIGKNPILVVRGP 65
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 66 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 124
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 125 FGLKPVHVKTAGGYIFISLAE 145
>gi|398843827|ref|ZP_10600947.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM84]
gi|398255187|gb|EJN40224.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM84]
Length = 430
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPILVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VC YH WTY LDG LL A G DF++KE
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKE 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|422656431|ref|ZP_16718877.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331014938|gb|EGH94994.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 432
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNFLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|357020222|ref|ZP_09082457.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
thermoresistibile ATCC 19527]
gi|356480258|gb|EHI13391.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
thermoresistibile ATCC 19527]
Length = 460
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P S Y DP FL LEL R+F + WQ +++ DP ++ IG +V R + I A
Sbjct: 21 PKSRYIDPEFLQLELDRLFTQVWQPACREEEIPDPGSYYEYCIGRQSIMVVRQKDRSIKA 80
Query: 94 FHNVCRHHASILATGSG--KKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK---EFG 148
FHN C H + G+G + C +HGW Y LDG +++ + G ++F + ++G
Sbjct: 81 FHNTCAHRGMKIVCGTGVEAEGELRCRFHGWRYSLDG---RSSFVPGREEFANRPREQWG 137
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
L P+ V TWG +V ++M E EWL L+ + + + R+
Sbjct: 138 LRPVHVGTWGGWVFISMADEPPE---------LLEWLDPLPTALAPFRL-QDMRFRWRKR 187
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTS 248
T+ N+K D +++ GYH P H Q ST
Sbjct: 188 TTLPANYKTVIDAFIE-GYHTPGTHPQTLRTAQSPHPSTE 226
>gi|334343484|ref|YP_004556088.1| Rieske (2Fe-2S) domain-containing protein [Sphingobium
chlorophenolicum L-1]
gi|334104159|gb|AEG51582.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sphingobium
chlorophenolicum L-1]
Length = 420
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE-----FVVCRDDN 88
P Y P ALE RVF R+W +G +Q+ P DF + EVE ++ R +
Sbjct: 31 PLESYRSPELFALERERVFRRAWLFMGRVEQVAKPGDFL---VREVEICNASILIIRGKD 87
Query: 89 GKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G++ AFHNVC H A+++ T G VC YHGW++ DG+L + + +
Sbjct: 88 GQVRAFHNVCPHRANLVETRREGNAPALVCRYHGWSFNNDGSLRGVPDQEMFLELDKSKC 147
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS-INGIDSSLSYLCR 206
GL P+ + W ++ +N+ ++ V +E+LG + + I+ S +
Sbjct: 148 GLPPVALEIWNGWIFINLAEK--------PEVSLDEFLGSFKDYYDGVEAINLDCSVVI- 198
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHK 234
E ++CNWKV D +++ YH+P H+
Sbjct: 199 -ETRLKCNWKVVADAFVE-AYHIPSIHR 224
>gi|422296411|ref|ZP_16384081.1| (Fe-S)-binding protein [Pseudomonas avellanae BPIC 631]
gi|407992432|gb|EKG34067.1| (Fe-S)-binding protein [Pseudomonas avellanae BPIC 631]
Length = 432
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNFLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|422654255|ref|ZP_16717002.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330967285|gb|EGH67545.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 432
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNFLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|398886528|ref|ZP_10641402.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM60]
gi|398189438|gb|EJM76713.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM60]
Length = 427
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD G I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKGNINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGAKHWMDLFMKQGAGFPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|304391275|ref|ZP_07373219.1| rieske domain protein [Ahrensia sp. R2A130]
gi|303296631|gb|EFL90987.1| rieske domain protein [Ahrensia sp. R2A130]
Length = 383
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 154/379 (40%), Gaps = 36/379 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ A P+ +YT+ S E VF+ +W +G+ + + D + ++ R
Sbjct: 14 PVGSARGLPNDFYTEQSTYDAEREAVFFANWAAIGFGMDVPEEADAKPVEFLGLPLLLVR 73
Query: 86 DDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI----- 139
+G++ F N CRH IL K + CPYH W Y L G L + G
Sbjct: 74 GRDGQVRVFQNTCRHRGMILIDEPKKVRGVIRCPYHSWCYDLTGKLKTTPHVGGPGQNTH 133
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
D + + GL+ + W + +N+ +A EE S V+ E G +S
Sbjct: 134 DDIDRDDLGLIEIRSHVWQDIIFINVSGQAPPFEEAASGVL--ERWKEFERPAHFGGAES 191
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL-DSYSTSLYEKVSIQRC 258
+ E + NWK+ +NY + YH+P+ H GL + +L D Y + S Q
Sbjct: 192 AF------ELEVNSNWKLAVENYCE-SYHLPWIHPGLNAYSKLEDHYHIMKAGEFSGQGT 244
Query: 259 ---------ESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ T D + + +A Y ++PN ++ G D I L P
Sbjct: 245 RVYNPDLSKDQAFTNYPDLSKKWAKQAEYISLFPNVLL---GVHRDHRFAIVLVPQGMDR 301
Query: 310 VFD----YFLDGSLKDDKAFIEQSLKDSEQ---VQMEDIILCEGVQRGLESPAYCSGRYA 362
+ Y+ D + F + K + Q V EDI + EG+Q G + G+++
Sbjct: 302 TVERISLYYADEKMTGPD-FADLRAKHAAQWKEVFEEDIFVVEGMQAGRHGRFFDGGKFS 360
Query: 363 PSVEQTMYHFHSLLHCNLT 381
P++++ + FH + +
Sbjct: 361 PAMDEPTWMFHHWIASQMV 379
>gi|406030825|ref|YP_006729716.1| dioxygenase subunit alpha yeaW [Mycobacterium indicus pranii MTCC
9506]
gi|405129372|gb|AFS14627.1| Putative dioxygenase subunit alpha yeaW [Mycobacterium indicus
pranii MTCC 9506]
Length = 445
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE ++ R+WQ+ +++ P D+ I + +V R D+ + A
Sbjct: 12 PKQRYYDPEFYALEAEMLWPRTWQMACRLEEIPRPGDYVEYEILDESVIVVRVDSRTVRA 71
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK--EFGLVP 151
+HN CRH L G+G + FVCP+HGW +GLDG R D N+ + LVP
Sbjct: 72 YHNACRHRGVKLVEGNGNRRTFVCPFHGWCWGLDGHNTFVLRPEAFADENLAADDLRLVP 131
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ WG +N+ D +W+ + + +D SL + +
Sbjct: 132 VRCELWGGCAWINLD---------DGAPALRDWMEPFASVYDAWQVD-SLRVEWWKSCRL 181
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
NWK+ +++ GYHVP H L Q
Sbjct: 182 PVNWKLAAAAFME-GYHVPQTHPQLLPSAQ 210
>gi|429055585|ref|ZP_19119980.1| rieske domain protein, partial [Escherichia coli 97.1742]
gi|427315748|gb|EKW77732.1| rieske domain protein, partial [Escherichia coli 97.1742]
Length = 323
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 135/309 (43%), Gaps = 25/309 (8%)
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI 139
V+ R + + AF+NVC H L +G GK K+ CPYH W + LDG L A +
Sbjct: 21 IVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENV 80
Query: 140 KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS 199
+F+ + LVP+ + + FV +NM A V ++ G +++L
Sbjct: 81 ANFDSDKAQLVPVRLEEYAGFVFINMDPNATS--------VEDQLPGLGAKVLEACPEVH 132
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
L R NWK DNYL+ YH AH G + +Q+D Y +++ ++Q
Sbjct: 133 DLKLAARFTTRTPANWKNIVDNYLE-CYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGF 191
Query: 260 SGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD----YF 314
+ +E + A + F ++P M+N P VI P + YF
Sbjct: 192 AKPSEQSFKFEEGTDAAFHGFWLWPCTMLN-VTPIKGMMTVIYEFPVDSETTLQNYDIYF 250
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAY-CSGRYAPS------VEQ 367
+ L D++ + + +D + ED+ L E VQ+GL+S Y GR E
Sbjct: 251 TNEELTDEQKSLIEWYRDV--FRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEH 308
Query: 368 TMYHFHSLL 376
+ HFH+LL
Sbjct: 309 GIAHFHNLL 317
>gi|435848586|ref|YP_007310836.1| ring-hydroxylating dioxygenase, large terminal subunit
[Natronococcus occultus SP4]
gi|433674854|gb|AGB39046.1| ring-hydroxylating dioxygenase, large terminal subunit
[Natronococcus occultus SP4]
Length = 364
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 144/339 (42%), Gaps = 47/339 (13%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
+T P E VF R W VG+ D + +P +F+ IG+ + +V R +G++ AF NV
Sbjct: 28 FTGPEAFEREKETVFGRDWVYVGHADSIAEPGQYFTRNIGDRQLIVVRGHDGEVKAFDNV 87
Query: 98 CRHHASILA-----TGSGKKSWFVCPYHGWTYGLDGTL------LKATRIT-GIKDFNVK 145
C H S + T G CPYH WTY LDG L + R+ ++D V+
Sbjct: 88 CAHRGSKMVEDTPMTDPGGGGRIQCPYHLWTYDLDGDLRSTPKSFEDARLNPDLEDDEVQ 147
Query: 146 EF-----GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
EF GL + V T GP V + + D+ +E G +E L ++
Sbjct: 148 EFDCETNGLNDVRVDTVGPLVFVTLAD--------DAPTAPSEGADGVAERLGSLPLE-E 198
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
+ R + CNWK+F + DG + D T + +
Sbjct: 199 YEHARRIVSEVACNWKLFAAVHFDGSE-------------ERDGDGTLAIAEDGWTVESA 245
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVI--PLAPTRCKVVFD-YFLDG 317
+G++D G +A + + +PN ++ Y V+ P+ P R +++ D YF DG
Sbjct: 246 SDDDGSEDRRPDGIEAQFHYRWPNVAVDVYDAVDGYGTVVLDPVGPDRVQLIADYYFRDG 305
Query: 318 SLKDDKAFIEQSL-KDSEQVQMEDIILCEGVQRGLESPA 355
D++ E+ L + + + + ED E LES A
Sbjct: 306 ----DRSEQERELVRRTRERRAEDADRAEQQWAALESGA 340
>gi|429848316|gb|ELA23819.1| iron-sulfur cluster-binding rieske family domain protein
[Colletotrichum gloeosporioides Nara gc5]
Length = 406
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 145/350 (41%), Gaps = 34/350 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY P LE +F + W +V + + + DF F + +D G+I
Sbjct: 27 PASWYRSPGMYELERRAIFSKRWLLVSHKARFVEAGDFVQITEAGFNFFLVKDRKGEIRG 86
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL--V 150
HNVCRH A ++ T SG S C YH W+YG DG L KA + + F+ + L V
Sbjct: 87 HHNVCRHRAYPLVETDSGHMSVLACKYHAWSYGFDGKLAKAPKYQELPSFDKTQNSLFKV 146
Query: 151 PLEVATWGPFVLLNMG---KEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
+ V G FV +N+ K V EE + V + + D +
Sbjct: 147 HVHVDQLG-FVWVNLDASEKPGVSWEEFFAQV------DEQPRLQNFKMDDYVFDHAW-- 197
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
E + NWK DNY + H +AS L Y IQ
Sbjct: 198 EMLGDYNWKTLADNYNE------VWHPAVASTTDLTKYWVETRGNW-IQHWNVDKP---- 246
Query: 268 DTHRLGSKAIYA-FIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLD-GSLKDDKAF 325
D LG IY+ F YPN + +M +P++ T+ K+ ++ + + S +++
Sbjct: 247 DVQGLG---IYSTFYYPNASMTVTPDFMYIMRCVPVSATQTKMEYEVYRNKNSTEEEFTS 303
Query: 326 IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
I + K QV ED LC G QR L + + +G P VE+ F +
Sbjct: 304 ISEFFK---QVLREDKDLCNGAQRNLNAGIFVNGELHPRVEKGPLFFQQI 350
>gi|337264915|ref|YP_004608970.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|336025225|gb|AEH84876.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mesorhizobium
opportunistum WSM2075]
Length = 415
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W +G+ +L P F + +IG+ V+ RD GKI+AFHN
Sbjct: 24 FYTDPDYFKLDMELIWYRDWLFIGHDCELPRPGSFITVQIGDYPVVLVRDQQGKINAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G + VCPYH WTY LDG LL A ++ + F+ +FGL P+
Sbjct: 84 SCRHRGSRVCNTDKGMAAKLVCPYHQWTYELDGRLLFARQMA--EGFDKSQFGLKPVACE 141
Query: 156 TWGPFVLLNMGKE 168
+ ++ + + KE
Sbjct: 142 SVAGYIFICLAKE 154
>gi|422588362|ref|ZP_16663030.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330874660|gb|EGH08809.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 432
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNFLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGHLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|330505370|ref|YP_004382239.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas mendocina
NK-01]
gi|328919656|gb|AEB60487.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas mendocina
NK-01]
Length = 430
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D +++ +F++ W + G T ++ +F + +IG+ +V R G+IHA
Sbjct: 34 PQPFYNDERLFQVDMQEIFHKEWLIAGMTCEIPAKGNFLTVQIGDNPILVIRGAEGQIHA 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++K++ L P+
Sbjct: 94 FHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDLKDYSLKPV 152
Query: 153 EVATWGPFVLLNMGK 167
+ T G F+ +++ +
Sbjct: 153 QCKTAGGFIFISLAE 167
>gi|163787257|ref|ZP_02181704.1| hypothetical protein FBALC1_01922 [Flavobacteriales bacterium
ALC-1]
gi|159877145|gb|EDP71202.1| hypothetical protein FBALC1_01922 [Flavobacteriales bacterium
ALC-1]
Length = 183
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 23/190 (12%)
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ 256
+D+S+S ++Y + NW ++CDNYL+G +H+P+ H+ L S L SY T +YE ++Q
Sbjct: 1 MDTSIS----KDYLVHANWALYCDNYLEG-FHIPFVHEDLNSILDYGSYKTEVYEYCNLQ 55
Query: 257 RCESGSTEGTDDTHRL---------GSKAIYAFIYPNFMINRYGPW-MDTNLVIPLAPTR 306
G T+ + L A Y +++PN M N Y PW + N+V PL R
Sbjct: 56 ---IGYTDEATEVFNLPEDHIDYGKNVSAYYYWVFPNMMFNFY-PWGLSINVVKPLDINR 111
Query: 307 CKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
KV F ++ D E + E+V+ ED + E VQ+G+ S Y +GR++P+ E
Sbjct: 112 TKVSFISYV----YDPSKLNEGAGSALEKVEREDEFVVENVQKGVRSSFYKAGRFSPTRE 167
Query: 367 QTMYHFHSLL 376
Q ++HFH+L+
Sbjct: 168 QGVHHFHTLI 177
>gi|408788461|ref|ZP_11200180.1| ring hydroxylating dioxygenase, alpha-subunit [Rhizobium lupini
HPC(L)]
gi|408485703|gb|EKJ94038.1| ring hydroxylating dioxygenase, alpha-subunit [Rhizobium lupini
HPC(L)]
Length = 414
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 157/373 (42%), Gaps = 42/373 (11%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W VG+ +++ +F+ ++G V+ R +G+I AFHN
Sbjct: 24 FYTDPDYFKLDMETIWYRDWLFVGHDCEVQKSGSYFTVQVGAYSVVIVRGRDGQIRAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G+ + VCPYH WTY LDG LL A + ++F+ +FGL P+
Sbjct: 84 SCRHRGSRVCTTQKGQSARLVCPYHQWTYDLDGKLLFARHMG--EEFDKGDFGLKPVACE 141
Query: 156 TWGPFVLLNMGKEAVHQE----EVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE- 208
T +V + + + E EV+S + + W + E I + L + RE
Sbjct: 142 TVAGYVFICLADQPADFEPMRAEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNREC 201
Query: 209 YTIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYEK 252
Y N C Y DGG P GL S ++D +
Sbjct: 202 YHCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVAR 261
Query: 253 VS-IQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+ I ES + G +DD A+ F YP + G + V+PL+
Sbjct: 262 MPLIGEAESYTMSGKRAVRRPLSDDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPLS 321
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
V + + KD ++ L+D V E D + E G+ SPAY G
Sbjct: 322 ANETMVTTKWLVH---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYEPG 378
Query: 360 RYAPSVEQTMYHF 372
Y+ E + F
Sbjct: 379 PYSMEDEGGVMQF 391
>gi|330819462|ref|YP_004348324.1| 2,4-D oxygenase large subunit [Burkholderia gladioli BSR3]
gi|327371457|gb|AEA62812.1| 2,4-D oxygenase large subunit [Burkholderia gladioli BSR3]
Length = 382
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 145/371 (39%), Gaps = 55/371 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P + YT P+FL E +F W VG L +P D+ + +G V R ++G + A
Sbjct: 33 PPAVYTSPAFLEREQQTIFRDEWLCVGRAGALANPGDYLTADLGGQPVAVLRAEDGTLRA 92
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
F NVC H S+L G G VCPYH W Y LDG L A + F + L +
Sbjct: 93 FSNVCLHRMSVLLEGRGNVRRIVCPYHAWNYSLDGRLQGAPMMDRQAGFCKDSYALPAVR 152
Query: 154 VATWGPFVLLNMGKE----AVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
W ++ L + A E+D+ ++ +G E E+
Sbjct: 153 CEVWQGWIYLTLNPAAPPVATRLAELDA-LIDRYGMGDYVETF-------------HEEH 198
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG-------- 261
NWK+ +N+++ YH+P H+ + + K+ C G
Sbjct: 199 VWNTNWKLLAENFME-SYHLPMLHRA----------TVGPHSKLDEMECPPGLPAFNYHW 247
Query: 262 -STEGT-------DDTHRL-----GSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK 308
+ E T D RL + A+ A IYPN ++ + ++ PL R
Sbjct: 248 ITKEATLPIGNAHPDNRRLEGHWRRTTALLA-IYPNHLVTLTPGYFWYLVLQPLGVDRVA 306
Query: 309 VVFDYFLDGSLKD--DKAFIEQSLKD-SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSV 365
+ F L D D A +LK ++V ED E V RG+ +P G + +
Sbjct: 307 IRFGGGLSPEFIDDADAAGHMATLKALLDEVNAEDRRGVEAVFRGVHAPLAAPGHLS-HL 365
Query: 366 EQTMYHFHSLL 376
E+ Y F L
Sbjct: 366 ERPNYDFARYL 376
>gi|399059488|ref|ZP_10745134.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
gi|398039427|gb|EJL32563.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
Length = 388
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 133/324 (41%), Gaps = 38/324 (11%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
I +AL P ++Y+ F ALE R+F W V + + D + ++ R
Sbjct: 21 IGEALALPGAFYSA-EFFALERERLFPSGWCAVTVASLIPEKGDVMPIDVAGWPVLLTRS 79
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK-----D 141
+ G+I AFHN+CRH L T K CP+H WTY LDG LL I G K
Sbjct: 80 NEGEIKAFHNICRHRGVKLVTECTHKRRLTCPWHAWTYSLDGELLSTPEIGGAKINQADG 139
Query: 142 FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
F+ + GL P+ V W V +N+G EA E +W+ +L+ D L
Sbjct: 140 FDRSKLGLKPIRVGRWLDLVFVNIGGEAPPFE---------DWIAPLEALLA----DYDL 186
Query: 202 SYLCRREYTIE---CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS-------TSLYE 251
+ L E ++ NWK+ + ++ YH+P+ H L + L ++ Y
Sbjct: 187 TNLVHGERLVDSYGANWKIAMEAGIE-DYHLPFGHPQLEAHLFRNTSPCVHKPVYAGGYV 245
Query: 252 KVSIQRCESGSTEG-----TDDTHRLGS--KAIYAF-IYPNFMINRYGPWMDTNLVIPLA 303
VS E T D R G +Y+ ++P+ + + ++P
Sbjct: 246 DVSAAHEEGSETRAWTARLPDLKTREGKPLPLLYSLMLFPSATVLITADHVMLGTLLPDG 305
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIE 327
PTR + + DG D A E
Sbjct: 306 PTRTIMDISLYYDGEAATDPALAE 329
>gi|158315107|ref|YP_001507615.1| Rieske (2Fe-2S) domain-containing protein [Frankia sp. EAN1pec]
gi|158110512|gb|ABW12709.1| Rieske (2Fe-2S) domain protein [Frankia sp. EAN1pec]
Length = 423
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 117/284 (41%), Gaps = 38/284 (13%)
Query: 41 PSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI--GEVEFVVCRDDNGKIHAFHNVC 98
P F ALE +F R+W VG +QL +F+ I VV RD++G++ AFHN+C
Sbjct: 32 PDFYALERDAIFRRAWLNVGRVEQLPRSGSYFTKEIEAARASIVVVRDNDGQVRAFHNIC 91
Query: 99 RHHASILA-------TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
RH + L +G F C YHGW YGLDG + + + K+FGLVP
Sbjct: 92 RHRGNKLVWNDFPREETAGSCRQFTCKYHGWRYGLDGAATFVQQEGEFFNLDKKDFGLVP 151
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ W F+ +N+ KE E+LG L D+ R +
Sbjct: 152 VHCDVWSGFIFVNLAKEPEQS--------LPEFLGPMVTALGGYPFDTMTERFYYRA-EV 202
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHR 271
NWK+F D + + YH P H + S + + Q D HR
Sbjct: 203 GANWKLFMDAFQE-FYHAPILHA---------RQTPSKFSTAAQQAGFEAPHYRIDGPHR 252
Query: 272 LGSKA-IYAF------IYPNFMINR---YGPWMDTNLVIPLAPT 305
L S A I A+ P I R +GPW + +L + P
Sbjct: 253 LVSTAGIKAWELDPEMRKPMEDITRSGLFGPWDEPDLGVEKMPA 296
>gi|417859077|ref|ZP_12504134.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium
tumefaciens F2]
gi|338825081|gb|EGP59048.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium
tumefaciens F2]
Length = 439
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 156/372 (41%), Gaps = 42/372 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP + L++ ++YR W VG+ ++ +F+ ++G V+ R +G+I AFHN
Sbjct: 50 YTDPDYFKLDMETIWYRDWLFVGHDCEVAKSGSYFTVQVGAYSVVIVRGRDGQIRAFHNS 109
Query: 98 CRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
CRH S + T G+ + VCPYH WTY LDG LL A + ++F+ +FGL P+ T
Sbjct: 110 CRHRGSRVCTTQKGQSARLVCPYHQWTYDLDGKLLFARHMG--EEFDKGDFGLKPVACET 167
Query: 157 WGPFVLLNMGKE----AVHQEEVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE-Y 209
+V + + + A + EV+S + + W + E I + L + RE Y
Sbjct: 168 VAGYVFICLADQPADFAPMRAEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNRECY 227
Query: 210 TIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYEKV 253
N C Y DGG P GL S ++D ++
Sbjct: 228 HCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVARM 287
Query: 254 S-IQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
I ES + G +DD A+ F YP + G + V+PL+
Sbjct: 288 PLIGEAESYTMSGKRAVRRPLSDDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPLSA 347
Query: 305 TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSGR 360
V + + KD ++ L+D V E D + E G+ SPAY G
Sbjct: 348 NETMVTTKWLVH---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYEPGP 404
Query: 361 YAPSVEQTMYHF 372
Y+ E + F
Sbjct: 405 YSMEDEGGVMQF 416
>gi|409418195|ref|ZP_11258201.1| putative iron/sulfur-binding protein [Pseudomonas sp. HYS]
Length = 430
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F + W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYCDERLFQIDMEEIFQKEWLIAGMTCEIPTKGNFITLQIGKNPILVVRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G++HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGQVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|260433405|ref|ZP_05787376.1| rieske domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417233|gb|EEX10492.1| rieske domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 385
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 37/369 (10%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
IE A P++ YTDP+ A E + W + T + +P D + ++ RD
Sbjct: 15 IETARGLPNAHYTDPAVHAEESQALLLDGWSGLAVTADVPEPGDAVPIEFLGIPLLLLRD 74
Query: 87 DNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKD---- 141
+G++ F N+CRH IL K + CPYH W Y +G L+ + G
Sbjct: 75 RSGQVRVFQNICRHRGMILVAEPRKIEGAIRCPYHSWCYSTEGRLVATPHVGGPGQNAHD 134
Query: 142 -FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
N E GLV + W V +N+ A E+ ++ ++ W + G DS+
Sbjct: 135 AVNRSELGLVEVRSHIWREVVWINVSGTAPAFEDANARLI-ERWAEFDVPMFH-GGPDSA 192
Query: 201 LSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY------------STS 248
+ CNWK+ +NY + YH+P+ H GL S +L+ + T
Sbjct: 193 F------RLDVNCNWKLAVENYCE-SYHLPWVHPGLNSYSRLEDHYHIQEPGLFSGQGTL 245
Query: 249 LYEKVSIQRCESGSTEGTDDTHRLGSK----AIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
+Y +++ E G T D LG+K A Y +PN ++ + ++ P A
Sbjct: 246 VYRQLT---GEDGRT--FPDFPGLGAKWDTAAEYIAAFPNVLLGVHRDHAFAIILRPEAQ 300
Query: 305 TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
R F + + D ++ + + V ED+ + EG+QRG +P + G ++P+
Sbjct: 301 DRTSEHIHLFY-ATPEIDADLRTRNAEQWKVVFEEDVFVVEGMQRGRAAPGFDGGHFSPA 359
Query: 365 VEQTMYHFH 373
++ + FH
Sbjct: 360 MDGPTHLFH 368
>gi|319780145|ref|YP_004139621.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166033|gb|ADV09571.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 415
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W +G+ +L P + + ++G+ V+ RD +GKI+AFHN
Sbjct: 24 FYTDPDYFKLDMELIWYRDWLFIGHDCELPKPGSYITVQVGDYPVVLVRDQHGKINAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G + VCPYH WTY LDG LL A ++ F+ +FGL P+
Sbjct: 84 SCRHRGSRVCNTEKGTAAKLVCPYHQWTYELDGRLLFARQMA--DGFDKSDFGLKPVACE 141
Query: 156 TWGPFVLLNMGKE 168
+ G ++ + + KE
Sbjct: 142 SVGGYIFICLAKE 154
>gi|237802323|ref|ZP_04590784.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025180|gb|EGI05236.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|385210375|ref|ZP_10037243.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385182713|gb|EIF31989.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 378
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 153/383 (39%), Gaps = 32/383 (8%)
Query: 11 LVAAQKLVYEFNPQI-PIEKALTP----PSSWYTDPSFLALELHRVFYRSWQVVGYTDQL 65
+ +A + + P+ +ALT P + Y+ ALE R+F W VG +++
Sbjct: 1 MSSANEKIIRLQPEFDKTRQALTTARHLPGAVYSAADIYALEKERIFMTHWLSVGRVEEI 60
Query: 66 KDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYG 125
+ D+ + + V+ R +I + N C H +A+G G F CPYH W YG
Sbjct: 61 ANVGDYMTFNVMGESIVIARPSADEIVVYMNQCLHRGVEIASGCGNSEEFSCPYHAWLYG 120
Query: 126 LDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWL 185
+DGTL+ A + + ++ + L + W +V +N + EE N W
Sbjct: 121 IDGTLISAPGMKAC-EVDLSQASLRRVTSHVWRGWVFVNFADDPAPFEEFIEPYERNLWW 179
Query: 186 GGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK----GLASGLQ 241
+ E + R E ++CNWK +N +D YHV HK G G Q
Sbjct: 180 FRTDECKLAD----------RVEIDVKCNWKFLIENLID-IYHVGVIHKNTFGGFVKGEQ 228
Query: 242 LD-------SYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWM 294
L + TS + + E + A A IYPN ++ +
Sbjct: 229 LKFHLEKDGGWHTSYEARPHSKSGEQVFPALPGVADKPSGIACKAGIYPNLNLSMRSDSI 288
Query: 295 DTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSE---QVQMEDIILCEGVQRGL 351
V P+ P +++ + + E+ + E Q+ ED ++ E +QR
Sbjct: 289 RAWHVWPVTPDTTRIICYLMFSSEAPEIPNYEEELARYREFVRQIIAEDTVMVESLQRSA 348
Query: 352 ESPAYCSGRYAPSVEQTMYHFHS 374
S + G +P +E+ +YH +
Sbjct: 349 GSKFFQPGPMSP-LEEALYHMEN 370
>gi|440723837|ref|ZP_20904191.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440727623|ref|ZP_20907850.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
gi|440358871|gb|ELP96205.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440363474|gb|ELQ00641.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
Length = 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|422675206|ref|ZP_16734552.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
gi|330972926|gb|EGH72992.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
Length = 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|289672486|ref|ZP_06493376.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae FF5]
gi|422667828|ref|ZP_16727689.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|424068344|ref|ZP_17805800.1| (Fe-S)-binding protein [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424074452|ref|ZP_17811861.1| (Fe-S)-binding protein [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|330980041|gb|EGH78301.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|407994218|gb|EKG34809.1| (Fe-S)-binding protein [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407997991|gb|EKG38418.1| (Fe-S)-binding protein [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|398897015|ref|ZP_10647902.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM55]
gi|398177448|gb|EJM65128.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM55]
Length = 427
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKNNINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G S F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNASGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|66048000|ref|YP_237841.1| Rieske (2Fe-2S) protein [Pseudomonas syringae pv. syringae B728a]
gi|63258707|gb|AAY39803.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae B728a]
Length = 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|255941418|ref|XP_002561478.1| Pc16g11770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586101|emb|CAP93847.1| Pc16g11770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 420
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 148/353 (41%), Gaps = 37/353 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY+ E +F R W + + + D+ I F++ +D G ++A
Sbjct: 29 PASWYSSQDIHEFERRAIFSRKWLLTTHKLRFAKTGDWLRYNIAGYAFILVKDREGNVNA 88
Query: 94 FHNVCRHHASILATGSGKKSW-FVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A + T G S F C YHGW+YGL+G L KA ++ F+ + GL+P+
Sbjct: 89 FHNVCRHRAFPVVTEEGGTSRIFSCQYHGWSYGLNGKLAKAPGYQEVEGFDKSKNGLLPI 148
Query: 153 EV-ATWGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEILSINGID-SSLSYLCRRE 208
V F+ LN+ G+E E D G G D ++ E
Sbjct: 149 HVHIDANGFIWLNLDAGEEPEISWEDD--------FKGIDLQPRFEGFDFEDYNFDSAWE 200
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
T E NWK+ D Y AH + SG L SY+ + T +
Sbjct: 201 ITGEYNWKIMADKY-------NTAHSDVPSGSNLSSYAV--------------DGKSTSE 239
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
G K ++ +PN + + ++P PT C V + + + + D++ E
Sbjct: 240 VIASGLKTATSYYFPNAAMTVSPHFFFMQRLVPTGPTTCSVRCEVYRNKNSSDEE--FES 297
Query: 329 SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
+ +++ E LC Q+ + + + + + S + + HF +++ +T
Sbjct: 298 INEIYKRIISEHKDLCVETQKNINTGEFANEQLH-STGEGLIHFQAVVRDLIT 349
>gi|416013928|ref|ZP_11561860.1| Rieske [2Fe-2S] domain-containing protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|416022048|ref|ZP_11567288.1| Rieske [2Fe-2S] domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422402951|ref|ZP_16480010.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. glycinea str. race
4]
gi|320326346|gb|EFW82399.1| Rieske [2Fe-2S] domain-containing protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331663|gb|EFW87601.1| Rieske [2Fe-2S] domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330872385|gb|EGH06534.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. glycinea str. race
4]
Length = 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|404447123|ref|ZP_11012207.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium vaccae ATCC 25954]
gi|403649395|gb|EJZ04778.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium vaccae ATCC 25954]
Length = 378
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 147/364 (40%), Gaps = 24/364 (6%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YT A E +F W + L DP F ++G ++ R +G + AF N
Sbjct: 17 YYTSAEVFAAEQEHIFEAMWFCAARSADLADPGRFKKVQVGRESVLLVRGRDGVLRAFLN 76
Query: 97 VCRHH-ASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKD-----FNVKEFGL 149
VCRH A + G G+ K CPYH WTY LDG L+ A I + D + +GL
Sbjct: 77 VCRHRGAQLCVEGEGEVKRTLRCPYHSWTYALDGRLVAAPNIGTLTDDEGAPIDRYRYGL 136
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREY 209
VP+ + W + + + E+V + G E + GI +L R Y
Sbjct: 137 VPVALTEWLGYAWVCLADTPPPFEDVMAETARTL---GDPEAVDRYGI-GALDVGHRVVY 192
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI-QRCESG----STE 264
+ NWK+ +N+++ YH H L L + + + + + SG + +
Sbjct: 193 DVAANWKLIVENFME-CYHCSTIHPELVGVLPEFARGVAAQANIGLGAQFGSGVAGFTVD 251
Query: 265 GTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG 317
G RL + YA + P +N + + + P+AP R V D+ G
Sbjct: 252 GGAGFDRLPGISEEQDRRYYAITVKPTVFLNLVPDHVIFHRMYPVAPDRTVVECDWLYTG 311
Query: 318 SLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLH 377
+ + S++ +V ++D CE Q + S AY G E + FHS +
Sbjct: 312 DVVGSARDVSNSVELFHRVNLQDFEACERTQPAMSSRAYRDGGVLVPAEHHLAEFHSWVV 371
Query: 378 CNLT 381
L
Sbjct: 372 SRLA 375
>gi|418406267|ref|ZP_12979586.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium
tumefaciens 5A]
gi|358006760|gb|EHJ99083.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium
tumefaciens 5A]
Length = 414
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 157/374 (41%), Gaps = 42/374 (11%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S+YTDP + L++ ++YR W VG+ ++ ++ + ++G V+ R +G+I A H
Sbjct: 23 SFYTDPDYFNLDMETIWYRDWLFVGHDCEVPKAGNYITVQVGAYSVVIIRGRDGQIRALH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + ++ G+ + VCPYH WTY LDG LL A + DF+ EFGL P+
Sbjct: 83 NSCRHRGSRVCSSHKGQSARLVCPYHQWTYDLDGKLLFARHMG--DDFDKAEFGLKPVHC 140
Query: 155 ATWGPFVLLNMGKE----AVHQEEVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE 208
T +V + + + A + EV+S + + W + E I + L + RE
Sbjct: 141 ETVAGYVFICLADQPADFAPMRAEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNRE 200
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYE 251
Y N C Y DGG P GL S ++D
Sbjct: 201 CYHCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVA 260
Query: 252 KVS-IQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL 302
++ I ES + G +DD A+ F YP + G + V+PL
Sbjct: 261 RMPLIGEAESYTMSGKRAVRRPLSDDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPL 320
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCS 358
V + ++ KD ++ L+D V E D + E G+ SPAY
Sbjct: 321 NANETMVTTKWLVN---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYQP 377
Query: 359 GRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 378 GPYSMEDEGGVMQF 391
>gi|254818848|ref|ZP_05223849.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
intracellulare ATCC 13950]
Length = 450
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE ++ R WQ+ +++ P DF I + +V R DN + A
Sbjct: 17 PKQRYYDPEFYALEAEMLWPRMWQMACRLEEIPKPGDFVEYEILDQSVIVARVDNHTVRA 76
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH L G+G + +VCP+HGW +GLDG T + ++ + + LV
Sbjct: 77 YHNACRHRGVKLVEGNGNRRTYVCPFHGWCWGLDGHNTFVLRPEAFAEENLSADDLRLVA 136
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ WG +N+ +A +W+ + + +DS R E+
Sbjct: 137 VRCELWGGCAWINLDDDA---------PALRDWMEPFASVYDAWQVDS-----LRVEWWQ 182
Query: 212 EC----NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
C NWK+ +++ GYHVP H L Q + +++ V+
Sbjct: 183 SCRLPVNWKLAAAAFME-GYHVPQTHPQLLPSAQPGEVAATVHPVVA 228
>gi|257482964|ref|ZP_05637005.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422595630|ref|ZP_16669917.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|298160223|gb|EFI01251.1| predicted dioxygenase, large terminal subunit [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330985934|gb|EGH84037.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 432
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|402701047|ref|ZP_10849026.1| Rieske [2Fe-2S] domain-containing protein [Pseudomonas fragi A22]
Length = 430
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F + W + G T ++ ++ + ++G +V R
Sbjct: 28 ERTFSLPQPFYNDERLFEIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGNNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G++HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGQVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|289624225|ref|ZP_06457179.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289648469|ref|ZP_06479812.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aesculi str. 2250]
gi|422585771|ref|ZP_16660828.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330871109|gb|EGH05818.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 432
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|71734122|ref|YP_276905.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71554675|gb|AAZ33886.1| Rieske 2Fe-2S domain protein [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 410
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 6 ERTYSLPQPFYSDDRLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 65
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 66 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 124
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 125 FGLKPVHVKTAGGYIFISLAE 145
>gi|288919874|ref|ZP_06414197.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
gi|288348706|gb|EFC82960.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
Length = 428
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 146/372 (39%), Gaps = 34/372 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P +A+ P + YTD F A E VF + W +G + +P DF + I +
Sbjct: 18 PTAQAVMLPRAVYTDAEFFAFEKEAVFGQEWLCLGRASDVPNPGDFVNVDIIGERLTMVH 77
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G+I VC+H +++ GSG F C YH WTYGLDG L+ A + + F+
Sbjct: 78 GQDGRIRVLSPVCQHRGMLVSEGSGNCRAFKCAYHHWTYGLDGRLVGAREMGRTEGFDRS 137
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
GL L V W FV ++ D +A L +L+ ++ ++
Sbjct: 138 RHGLPSLPVEQWQGFVFTSL--------RADPLPLAPR-LAKLDALLANFELERCVTRNS 188
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK------------- 252
++ NWKV +N+ D GYH H G+ D Y+
Sbjct: 189 FSSPSMPWNWKVMFENFND-GYHASRLHAGVHDFCPSDRSEFLPYDDDDAAIARTNGFLH 247
Query: 253 -----VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
++QR G + R S+A +A + P I L+ P+
Sbjct: 248 LDGGFNALQRALLPVFPGITEEER--SRAAFALVPPTLCIGVAPDQAFYFLIRPVDAGHI 305
Query: 308 KVVFDYFLDGSLKDDKAFIEQ---SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
V +Y D+ F E+ S + +D+ GVQ+GL S GRY+
Sbjct: 306 AVDVNYLFHPDALRDRLFEEKYELSNAGVNGIVAQDVEATTGVQQGLTSRFAPRGRYS-Y 364
Query: 365 VEQTMYHFHSLL 376
+E+ F+ L
Sbjct: 365 LEEAQAQFNRWL 376
>gi|326385470|ref|ZP_08207109.1| Rieske (2Fe-2S) domain protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326210009|gb|EGD60787.1| Rieske (2Fe-2S) domain protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 390
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 152/363 (41%), Gaps = 44/363 (12%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
I A T P YT F E ++ + W VG + + D+F+ RI + VV R
Sbjct: 20 IGSAETLPPPCYTSGEFYEFEKRALYEKEWLCVGRVHWIPENGDYFTTRIIDEPVVVARG 79
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G+I A +VC+H A ++A G G F+CPYH W Y L+G L+ + +F+ K
Sbjct: 80 LDGEIRAMSSVCQHRAMLVAEGHGNARGFLCPYHHWAYNLEGELVGVPAMNRTCNFDRKA 139
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
+ L V W F+ +N ++A + V E + G ++ I G +
Sbjct: 140 YSLPRFAVEVWNGFIFINFDRDAAPLAPRLAQVA--EAVAG-YDLAHITGPRPDPA---- 192
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKG---------LASGLQLDS-------YSTSLY 250
T+ NWKV +N D GYH H G LA + D ++ +L+
Sbjct: 193 --PTMPWNWKVMFENNND-GYHASKLHHGPLHDFIPSNLAEFPESDPADAGFLRFNGTLH 249
Query: 251 EKVSI---QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVI-----PL 302
+ QR G DDT R ++ +A + P + M ++LVI P
Sbjct: 250 PDAAFNATQRAVFPIFPGLDDTMR--NRVTFANVPPTLSLV-----MTSDLVIYMILRPN 302
Query: 303 APTRCKVVFDYFLDGSLKDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
P ++ D AF ++ +++ + + +D + VQ+GL S G
Sbjct: 303 GPESLEMDTGVLFAPGATQDPAFEHKLDMTMRATSHIIAQDFHVDALVQQGLRSRFAPRG 362
Query: 360 RYA 362
RY+
Sbjct: 363 RYS 365
>gi|104784082|ref|YP_610580.1| Rieske family iron-sulfur cluster-binding protein [Pseudomonas
entomophila L48]
gi|95113069|emb|CAK17797.1| putative iron-sulfur cluster-binding protein, Rieske family
[Pseudomonas entomophila L48]
Length = 430
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFQIDMQEIFHKEWLIAGLVCEIPAKGNYITLQIGKNPIIVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VCPYH WTY LDG LL A G DF++ +
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|167575104|ref|ZP_02367978.1| benzoate 1,2-dioxygenase, alpha subunit [Burkholderia oklahomensis
C6786]
Length = 427
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+E PS +Y DP EL R+FYR+W V + +L +P DF + IG +V RD
Sbjct: 18 VESDRIAPSMYY-DPELFEAELERIFYRTWIWVAHDSELPNPGDFVTTTIGRQPVIVVRD 76
Query: 87 DNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLK---ATRITGIKDF 142
NG ++ N CRH A++ G F CPYH W+Y LDGTL G+ D
Sbjct: 77 RNGDVNVLQNRCRHRGATVCEAHRGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDK 136
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILSINGIDSSL 201
N + LV L V T+ V + ++ E +D + A W+ ++ G +
Sbjct: 137 N--DLPLVKLRVGTYQGLVFASFNQDV---EPLDDFLGAAKPWI----DLFMKQGAGYPI 187
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
++ + NWK+ +N D YH P HK
Sbjct: 188 KSNGEHKFKFKGNWKIQLENTTD-LYHFPVVHK 219
>gi|37520526|ref|NP_923903.1| dioxygenase [Gloeobacter violaceus PCC 7421]
gi|35211520|dbj|BAC88898.1| gll0957 [Gloeobacter violaceus PCC 7421]
Length = 357
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 147/367 (40%), Gaps = 25/367 (6%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q P + P ++YTD EL ++ +WQ VG + L +P D+ + +GE V
Sbjct: 5 QPPRPRTYELPGNYYTDLDVYRRELQTIWRSTWQWVGRLEDLTNPGDYLATVLGEEPIFV 64
Query: 84 CRDDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
R +G++ A HNVC H A +L G + CPYH WT+ L G LL + +
Sbjct: 65 VRGGDGELLAMHNVCPHRGARLLPQKQGSCKFLQCPYHAWTFDLSGKLLAVAQPGWFPEL 124
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID---- 198
+ L +V +WG FV +N E E+L G + L+ G
Sbjct: 125 DKSAVRLAGAQVDSWGGFVFVNPDPEGE---------CLAEYLAGVPDYLNQYGQRWEDL 175
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL----QLDSYSTSLYEKVS 254
+++ R E NWK +N+++ YH H + L ++ + + +
Sbjct: 176 RQIAHFTREE---PINWKFQIENFVED-YHFATVHAETLTPLYDVQRIGTIPAGRHINIP 231
Query: 255 IQRCESGSTEGTDDTH-RLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
+ + + G + FI+PN + + IP+ PT + F+
Sbjct: 232 VPYAPNCPPKDPQRRRWEAGGVSYQGFIFPNITYGTSAHTVFFSRYIPVNPTVTR--FEA 289
Query: 314 FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
F+ + A +V ED +C +Q G+ S AY A E + HF+
Sbjct: 290 FIYQTPAQHAAEPYIGEAGPSKVGQEDTDVCTLLQEGVRSRAYQISHLAEEHELGISHFY 349
Query: 374 SLLHCNL 380
+ + L
Sbjct: 350 NTVRAYL 356
>gi|302186144|ref|ZP_07262817.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae 642]
gi|443641808|ref|ZP_21125658.1| Putative GbcA (glycine betaine catabolism A) protein, subunit alpha
[Pseudomonas syringae pv. syringae B64]
gi|443281825|gb|ELS40830.1| Putative GbcA (glycine betaine catabolism A) protein, subunit alpha
[Pseudomonas syringae pv. syringae B64]
Length = 432
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|440743320|ref|ZP_20922632.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
gi|440375843|gb|ELQ12539.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
Length = 432
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMG-DDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVHVKTAGGYIFISLAE 167
>gi|423693981|ref|ZP_17668501.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens SS101]
gi|387999219|gb|EIK60548.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens SS101]
Length = 431
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|357025878|ref|ZP_09087989.1| Rieske (2Fe-2S) iron-sulfur domain containing protein
[Mesorhizobium amorphae CCNWGS0123]
gi|355542187|gb|EHH11352.1| Rieske (2Fe-2S) iron-sulfur domain containing protein
[Mesorhizobium amorphae CCNWGS0123]
Length = 415
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTD F L++ ++YR W +G+ +L P F + +IG+ V+ RD GKI+AFHN
Sbjct: 24 FYTDADFFKLDMELIWYRDWLFIGHDCELPKPGSFITAQIGDYPVVLVRDQQGKINAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G + VCPYH WTY LDG LL A ++ F+ +F L P+
Sbjct: 84 SCRHRGSRVCNTEKGTAAKLVCPYHQWTYELDGRLLFARQMA--DGFDKSQFSLKPVACE 141
Query: 156 TWGPFVLLNMGKE 168
+ G ++ + + KE
Sbjct: 142 SVGGYIFICLAKE 154
>gi|254282076|ref|ZP_04957044.1| rieske (2Fe-2S) domain protein [gamma proteobacterium NOR51-B]
gi|219678279|gb|EED34628.1| rieske (2Fe-2S) domain protein [gamma proteobacterium NOR51-B]
Length = 413
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
PS Y+DP+F E +VF RSW + + D+L +P F I E V+ +G IHA
Sbjct: 33 PSRRYSDPAFYEQEQQQVFRRSWLLAAHIDELPEPGSFLRWDIAEPPVVLVHASDGTIHA 92
Query: 94 FHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
N C H A ++ +G + CPYHGW+Y DG L+ + GL L
Sbjct: 93 LINRCSHRGAPVVMPATGSRPRLTCPYHGWSYAHDGELIAIASDRDFGAIDKANLGLPAL 152
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE-YTI 211
G + +N +A E +++ +EW D L RR+ +TI
Sbjct: 153 RCERLGALIFVNFDSQAPSLEASLGSLI-DEWA----------EFDLQNCRLSRRDRFTI 201
Query: 212 ECNWKVFCDNYLDGGYHVPYAH-KGLASGLQLDSYSTSLY 250
+ NWK+ + ++ YHVP H K +A+ L + + Y
Sbjct: 202 KSNWKIAMEANME-VYHVPMVHRKTVAAALDANRNVNTFY 240
>gi|254510058|ref|ZP_05122125.1| putative dioxygenase subunit alpha YeaW [Rhodobacteraceae bacterium
KLH11]
gi|221533769|gb|EEE36757.1| putative dioxygenase subunit alpha YeaW [Rhodobacteraceae bacterium
KLH11]
Length = 360
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 134/333 (40%), Gaps = 20/333 (6%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDP +E V R+WQ + L +P + + +I + R + KI F
Sbjct: 10 ARYYTDPVVFRIEAEGVLARTWQFGCHASDLAEPGAYVAFQIAGQDLFAIRGRDQKIRVF 69
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
+NVC+H A L +GSG VCPYH WTY L G L + ++ F+ L +
Sbjct: 70 YNVCQHRAHQLVSGSGTTRVVVCPYHAWTYELTGELRAGPNLKVVEGFDKSTVCLTEVRA 129
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWL-GGSSEILSINGIDSSLSYLCRREYTIEC 213
FV +N+ A E +W G +E+ + L L E C
Sbjct: 130 EQLLGFVFVNLDPNAAPME---------DWFPGARAELERWVPNWADLKPLEWVEIPENC 180
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASGL------QLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWKV +NY + YH H A+G+ + L Q E+ + +
Sbjct: 181 NWKVSVENYSE-CYHCSLNHPTFANGVVRPETYDIQPQGMCLRHTTECQSLENMTYDIQS 239
Query: 268 DTHRLGSKAIYAFIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFI 326
+ + F++P F Y G ++T + V ++ G + DD
Sbjct: 240 GFAHFDEYSSW-FLWPMFSFQVYPGNVLNTYHWRAVDADHVVVWRGWYSVGGV-DDPKIR 297
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ + +D EDI L E VQRGL S Y G
Sbjct: 298 QLAAQDRATTVEEDIRLVESVQRGLHSRGYRPG 330
>gi|387896045|ref|YP_006326342.1| Rieske [2Fe-2S] domain-containing protein [Pseudomonas fluorescens
A506]
gi|387162340|gb|AFJ57539.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens A506]
Length = 431
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|384531652|ref|YP_005717256.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Sinorhizobium meliloti BL225C]
gi|333813828|gb|AEG06496.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sinorhizobium meliloti
BL225C]
Length = 412
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 161/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YT P AL+L +FY+ W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYTSPEVYALDLQHIFYKQWLYAVPACQLAKAGSYTTLRVGAYEVVIVRGRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DFN ++GL P+ +
Sbjct: 85 SCRHRGSLICKAREGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFNASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGSTE 264
NWK+ +N + YH H L LD + +V RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQVHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|398892749|ref|ZP_10645733.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
gi|398185032|gb|EJM72453.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
Length = 432
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 29 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 88
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 89 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 147
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 148 YGLKPVNVKTAGGYIFISLAE 168
>gi|398981145|ref|ZP_10689329.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM25]
gi|398133863|gb|EJM23044.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM25]
Length = 430
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 27 ERTYSLPQPFYSDERLFDIDMQEIFHKEWLIAGMTCEIPAKGNYITLQIGKNPIIVIRGA 86
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 87 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 145
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 146 YGLKPVNVKTAGGYIFISLAE 166
>gi|388542984|ref|ZP_10146276.1| putative iron/sulfur-binding protein [Pseudomonas sp. M47T1]
gi|388279070|gb|EIK98640.1| putative iron/sulfur-binding protein [Pseudomonas sp. M47T1]
Length = 431
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ +F + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTSEIPTKGNFITLQIGKNPIIVVRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-SDFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL + V T G ++ +++ +
Sbjct: 147 YGLKQVNVKTAGGYIFISLAQ 167
>gi|374612351|ref|ZP_09685130.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mycobacterium tusciae
JS617]
gi|373547794|gb|EHP74509.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mycobacterium tusciae
JS617]
Length = 452
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P ++ P+ Y P F LE+ R++ + WQ+ D + +P D+F R G ++ R
Sbjct: 26 PPQRPTLVPAQRYYSPDFARLEVERMWPKVWQLACTVDHVAEPGDYFEYRCGPYSILIVR 85
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D+G++ AF NVCRH + L GSG C YHGWT+ L G+L + G +
Sbjct: 86 GDDGELRAFQNVCRHRGNSLCAGSGSDLRELRCGYHGWTWDLAGSLKRVPNRKGFGALRL 145
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAV----HQEEVDSNVVANEWLGGSSEILSINGIDSS 200
++ L+ + V TW V +N+ +A+ + EE+ + N LG
Sbjct: 146 SDYPLLGVRVETWERLVFVNLDTDAIPLRDYLEEMPDDTAWNR-LG-------------- 190
Query: 201 LSYLCRREYTIE--CNWKVFCDNYLDGGYHVPYAHKGL 236
+ C TIE NWK D + + YH+ H L
Sbjct: 191 -DFRCYATMTIEVDANWKTIADGFSE-TYHIQTLHPEL 226
>gi|254481249|ref|ZP_05094494.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
gi|214038412|gb|EEB79074.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
Length = 422
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 47 ELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHH-ASIL 105
EL + +RSW + ++ P D+ +GE ++ RD++G+IHA N+CRH A +
Sbjct: 44 ELENLIFRSWLYAAHVSEVPSPGDYQLFEVGEDSIIISRDEDGEIHALMNICRHRGARVC 103
Query: 106 ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLEVATWGPFVLLN 164
SG + FVCPYHGW Y +G LKA R G+K+ F+ ++GL + + + +N
Sbjct: 104 EHASGNRKTFVCPYHGWVYKTNGE-LKAAREMGMKEGFDKADYGLKKVPCVVYQGLIFIN 162
Query: 165 MGKEAVHQEEVDSNVVANEWLGGSSEI-LSINGIDSSLSYLC-RREYTIECNWKVFCDNY 222
D N A ++LG S + + D + + ++ Y ++ NWK+ +NY
Sbjct: 163 ----------CDQN--APDFLGPLSHLDRQLGAYDLPNAKVAHKKSYRVDANWKLVLENY 210
Query: 223 LDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIY 282
L+ YH +H+ A L ++ E V S G D G A Y IY
Sbjct: 211 LE-CYHCATSHRAYARLHTLKDLESNTREFVQAMLDRSDEVTGID-----GMSADYYAIY 264
Query: 283 PN 284
N
Sbjct: 265 NN 266
>gi|428225322|ref|YP_007109419.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Geitlerinema
sp. PCC 7407]
gi|427985223|gb|AFY66367.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geitlerinema sp. PCC
7407]
Length = 367
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 39/361 (10%)
Query: 33 PPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIH 92
PP +Y++ F LE ++ ++WQ+VG L P D+ + +G+ V+ R+D G +
Sbjct: 23 PPFYYYSEEIF-ELERRSLWQKAWQMVGRASDLPAPGDYLTCTLGDQPMVIVRNDAGDLR 81
Query: 93 AFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN C H + + G G + CPYHGW + +G L R + + LV
Sbjct: 82 IFHNACPHRGAKMMEGQGHCNRIRCPYHGWNFDREGRLRGLPRAEHFPGLSKSDVNLVAG 141
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V TWG F+ + E E++ S++ + + L + R Y
Sbjct: 142 RVETWGGFIFASAEPEG---EDLKSHLAEF-----PAFLEQYEQPWEDLEEIDRWFYEEP 193
Query: 213 CNWKVFCDNYLDGGYHVPYAH-KGLA--SGLQLDSYSTSLYEKVSIQRCESGSTEGTDD- 268
NWK +NYL+ YH+P H + L LQ+ T + ++S+ + E
Sbjct: 194 ANWKFPIENYLE-CYHLPVVHARSLRCFDPLQIQYAPTGRHYQISVPFVDEAIVENHPAF 252
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDT-------------NLVIPLAPTRCKVVFDYFL 315
+ + + F++PN+M+N + +++ P + K ++ Y
Sbjct: 253 SGKRRGFSYQGFVFPNWMVNTAKDKVSVFRLTPLTPTTTRFEVILYQTPAQ-KALYPY-- 309
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
D +AF + + + ED +Q+G+ S Y +YA ++E + HFH
Sbjct: 310 -----DREAF----RPEFDHMLNEDFGAVRSLQQGVRSRGYKVTQYAETLEYGITHFHRS 360
Query: 376 L 376
L
Sbjct: 361 L 361
>gi|312963493|ref|ZP_07777975.1| Rieske (2Fe-2S) region [Pseudomonas fluorescens WH6]
gi|311282299|gb|EFQ60898.1| Rieske (2Fe-2S) region [Pseudomonas fluorescens WH6]
Length = 432
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 29 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 88
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 89 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 147
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 148 YGLKPVNVKTAGGYIFISLAE 168
>gi|326386784|ref|ZP_08208404.1| digoxigenin subunit alpha [Novosphingobium nitrogenifigens DSM
19370]
gi|326208703|gb|EGD59500.1| digoxigenin subunit alpha [Novosphingobium nitrogenifigens DSM
19370]
Length = 453
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ LEL RVF R+W + + Q+ DFF+ +GE +V R +G I A N
Sbjct: 22 YTDPALYELELERVFARTWLFLAHESQIPKAGDFFNTYMGEDPVLVVRQKDGSIAAMMNQ 81
Query: 98 CRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
CRH + SG F CPYHGW YG+DG L +VPLE
Sbjct: 82 CRHRGMKVCHADSGNTRAFTCPYHGWAYGVDGGLQ-----------------MVPLEKEA 124
Query: 157 W-GPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL---SYLCRRE---- 208
+ G G V + E +V W G+ ++ G D + +L RRE
Sbjct: 125 YRGKLDKSKWGLVKVPRLETYKGLVFGNWDEGAPSLVDYLG-DMAWYLDGFLDRREGGTE 183
Query: 209 -------YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL 242
+ IECNWK + + YH PY H AS +Q+
Sbjct: 184 VVGGIHKWVIECNWKFAAEQFCSDQYHAPYTH---ASAIQV 221
>gi|398864521|ref|ZP_10620055.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
gi|398245120|gb|EJN30650.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
Length = 431
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|399000466|ref|ZP_10703192.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
gi|398129693|gb|EJM19049.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
Length = 432
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 29 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 88
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 89 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 147
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 148 YGLKPVNVKTAGGYIFISLAE 168
>gi|421138437|ref|ZP_15598500.1| Large subunit of ring-hydroxylating dioxygenase [Pseudomonas
fluorescens BBc6R8]
gi|404510324|gb|EKA24231.1| Large subunit of ring-hydroxylating dioxygenase [Pseudomonas
fluorescens BBc6R8]
Length = 427
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD G I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKGAINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + ++++ ++LGG+ + + G + +++
Sbjct: 147 VDSYAGMVF------ASYNDDIEP---LADFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
+ NWK+ +N D GYH P HK S + ++
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSVDAET 230
>gi|404422631|ref|ZP_11004312.1| dioxygenase [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
gi|403656394|gb|EJZ11206.1| dioxygenase [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
Length = 452
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 15/220 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+S Y P F+A E ++ + WQVVG D+L D+ RI + ++V R + ++ A
Sbjct: 29 PTSRYIAPEFVAQERDSIWKKVWQVVGRVDELTKAGDWKQYRIFDQSYIVVRGKDERLRA 88
Query: 94 FHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
F N CRH ++L A G+ K+ F+C YH W+Y LDG L R + GL+
Sbjct: 89 FVNACRHRGNVLCREARGNAKRG-FLCQYHLWSYDLDGRLKGMLREALAGPIDKDTHGLI 147
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ V T+ F+ LN +A + VAN +L+ ++ ++ + E
Sbjct: 148 EVSVGTFAGFIFLNPDPDAEPLTDFIGAEVAN--------MLAPYHLEEMVTVMDVTE-A 198
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
I+CNWKV D + + GYH+ H L + +D +TS Y
Sbjct: 199 IDCNWKVVLDAFQE-GYHIDGIHPQLLRVINIDP-ATSRY 236
>gi|399909747|ref|ZP_10778299.1| aromatic-ring-hydroxylating dioxygenase, alpha subunit [Halomonas
sp. KM-1]
Length = 422
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ Y DP E+ ++F ++W V + + D F ++G +V RD G IH
Sbjct: 22 TPMYEDPRLFEEEMQKIFKKTWVWVAHESEFPDKGSFRLSQVGLEPVIVVRDRKGAIHVM 81
Query: 95 HNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTL--LKATRITGIKDFNVKEFGLVP 151
N CRH A++ GK S F CPYHGW YGLDG+L L G DF+ + GL+
Sbjct: 82 VNRCRHRAATVCEVKKGKTSSFQCPYHGWGYGLDGSLRALPYPEQYG-DDFDKAQHGLLK 140
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
L ++ V +EA + VD +W+ ++ G + L ++++
Sbjct: 141 LRTESYAGMVFATFNEEA--EPLVDFLGPVTKWI----DLFMKQGAGYPVKVLGEHQFSV 194
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWKV +N D YH P HK L
Sbjct: 195 PMNWKVQLENTTD-AYHFPVVHKSFLQSL 222
>gi|398852789|ref|ZP_10609431.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398242874|gb|EJN28477.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 431
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|395498488|ref|ZP_10430067.1| phenylpropionate dioxygenase large terminal subunit [Pseudomonas
sp. PAMC 25886]
Length = 427
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD G I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKGAINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + ++++ ++LGG+ + + G + +++
Sbjct: 147 VDSYAGMVF------ASYNDDIEP---LADFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
+ NWK+ +N D GYH P HK S + ++
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSVDAET 230
>gi|330993648|ref|ZP_08317582.1| Putative dioxygenase subunit alpha yeaW [Gluconacetobacter sp.
SXCC-1]
gi|329759222|gb|EGG75732.1| Putative dioxygenase subunit alpha yeaW [Gluconacetobacter sp.
SXCC-1]
Length = 400
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 152/361 (42%), Gaps = 36/361 (9%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P E A + P Y D SF E +F W VG L + ++F+ I +V
Sbjct: 23 LPTEMAESLPPLCYVDKSFYEFEKKAIFDHEWLCVGRESWLDEAGEYFTTTIVGEPILVT 82
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
R +G + A +VC+H ++A G G+K FVCPYH WTYGLDG L+ A + F+
Sbjct: 83 RGRDGVLRAMSSVCQHRGMLVAEGHGRKRSFVCPYHHWTYGLDGQLVAAPAMEKTCGFDK 142
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
L +V W F+ +N ++D+ +A LG SE++ + +
Sbjct: 143 ASASLPAFQVEVWEGFIFINF--------DLDAPPLAPR-LGAVSEVVRNYRLAEAEGPR 193
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL---QLDSYSTSLYEKVSIQRCESG 261
NWKV +N D GYH H G+ +L ++ T + R +
Sbjct: 194 PGEPLHYPWNWKVMFENNND-GYHANKLHHGVLHDFVPSELAAFPTLPEDTAGYYR--TN 250
Query: 262 STEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNL--VIPLAPTRCKVVF-------- 311
T D + KA+ ++P+ + + NL + L T V++
Sbjct: 251 GTLHADASFNATQKAVLP-LFPDLDMAGRSQMVFANLPPTLSLVLTSDMVIYMILRADGP 309
Query: 312 -DYFLDGSL------KDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
++LD + D AF + +++ + + +D+ + E VQ GL S GRY
Sbjct: 310 ESHYLDQGVLVAPGAMADPAFSYKMAMNMQAASDIIAQDLHVDELVQEGLRSRFAPRGRY 369
Query: 362 A 362
+
Sbjct: 370 S 370
>gi|398843317|ref|ZP_10600464.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
gi|398103501|gb|EJL93670.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
Length = 431
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLSE 167
>gi|440739217|ref|ZP_20918737.1| putative iron/sulfur-binding protein [Pseudomonas fluorescens
BRIP34879]
gi|440380030|gb|ELQ16605.1| putative iron/sulfur-binding protein [Pseudomonas fluorescens
BRIP34879]
Length = 431
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|149923443|ref|ZP_01911847.1| Rieske (2Fe-2S) domain protein [Plesiocystis pacifica SIR-1]
gi|149815695|gb|EDM75222.1| Rieske (2Fe-2S) domain protein [Plesiocystis pacifica SIR-1]
Length = 378
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 150/341 (43%), Gaps = 24/341 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P++ YTD + E RVF R VV + L +P DF + + +V R D+G++ A
Sbjct: 32 PTTDYTDAARFERERERVFRRELNVVTLSSALAEPGDFITAEVVGAPVLVSRGDDGQLRA 91
Query: 94 FHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F NVCRH A++ SG+ FVCPYH WTY DG+L K G ++ GLV L
Sbjct: 92 FLNVCRHRGATVEPRASGRCKRFVCPYHAWTYNNDGSLHKVRHKDGFPTLQPQDHGLVEL 151
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
V + + E + + +V E+ + G + R++
Sbjct: 152 RCVEAAGLVFV-CPTPGLEPEPLPAALVG--------ELEQMLGPRPTAYARTARDWA-- 200
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST-----SLYEKVSIQRCESGSTEGTD 267
NWK+ + ++ YH AH+ + D+ ST S V +R + E
Sbjct: 201 ANWKIIVEGGIE-SYHFSVAHEQTIAPFFTDTLSTWEAIGSHTRTVLPKRSIASLAERPK 259
Query: 268 DTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKV----VFDYFLDGSLKDD 322
D R+ + I+PN +I D L+ P+A R ++ V + G + +
Sbjct: 260 DEWRIREHTHVVYTIHPNALILTQKTHFDLILMTPVAVDRTRIEVLTVGNAPESGEVSER 319
Query: 323 -KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
+AF++Q+ S ED + E +QRGL +PA R+A
Sbjct: 320 ARAFLQQNHGFSLLTLDEDFEIGEQIQRGLATPANTHFRFA 360
>gi|325292112|ref|YP_004277976.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium sp.
H13-3]
gi|325059965|gb|ADY63656.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium sp.
H13-3]
Length = 414
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 156/374 (41%), Gaps = 42/374 (11%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S+YTDP + L++ ++YR W VG+ ++ ++ + ++G V+ R +G+I A H
Sbjct: 23 SFYTDPDYFNLDMETIWYRDWLFVGHDCEVPKAGNYITVQVGAYSVVIIRGRDGQIRALH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + ++ G+ + VCPYH WTY LDG LL A + DF+ EFGL P+
Sbjct: 83 NSCRHRGSRVCSSHKGQSARLVCPYHQWTYDLDGKLLFARHMG--DDFDKAEFGLKPVHC 140
Query: 155 ATWGPFVLLNMGKE----AVHQEEVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE 208
T +V + + + A + EV+S + + W + E I + L + RE
Sbjct: 141 ETVAGYVFICLADQPADFAPMRAEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNRE 200
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYE 251
Y N C Y DGG P GL S ++D
Sbjct: 201 CYHCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVA 260
Query: 252 KVS-IQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL 302
++ I ES + G +DD A+ F YP + G + V+PL
Sbjct: 261 RMPLIGEAESYTMSGKRAVRRPLSDDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPL 320
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCS 358
V + + KD ++ L+D V E D + E G+ SPAY
Sbjct: 321 NANETMVTTKWLVH---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYQP 377
Query: 359 GRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 378 GPYSMEDEGGVMQF 391
>gi|433615406|ref|YP_007192202.1| Phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenase, large terminal subunit [Sinorhizobium
meliloti GR4]
gi|429553620|gb|AGA08603.1| Phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenase, large terminal subunit [Sinorhizobium
meliloti GR4]
Length = 412
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 162/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y P AL+L +FYR W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYVSPEVYALDLQHIFYREWLYAVPACQLARTGSYVTLRVGAYEVVIVRSRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ V + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPVFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY------EKVS--IQRCESGSTE 264
NWK+ +N + YH H L LD + EK+ RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSEKLQAHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|398867112|ref|ZP_10622581.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM78]
gi|398237967|gb|EJN23705.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM78]
Length = 427
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKNNINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|126727833|ref|ZP_01743662.1| Rieske 2Fe-2S domain protein [Rhodobacterales bacterium HTCC2150]
gi|126702855|gb|EBA01959.1| Rieske 2Fe-2S domain protein [Rhodobacterales bacterium HTCC2150]
Length = 390
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 149/364 (40%), Gaps = 36/364 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y + A E +F + W G ++ + D+ + + RD +G++ + NV
Sbjct: 34 YWNEDIAASEDANIFRKDWVCPGLAAEIPNQGDYLTYTVAGQPIFCVRDKSGEVKTYSNV 93
Query: 98 CRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATW 157
CRH L GSG S VCPYH WTY L+G L+ A + FN KE L + W
Sbjct: 94 CRHRMMQLLEGSGTTSRVVCPYHAWTYDLNGRLIGAGHMEKTNGFNKKEICLPEIRTEIW 153
Query: 158 GPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKV 217
++ + + +A +E L +E++S G+++ + + + + NWK+
Sbjct: 154 NGWIYVTLNPDAPSVQEA---------LAPLNEVVSRYGMENYVP-VVSENHVWKTNWKL 203
Query: 218 FCDNYLDGGYHVPYAHKGLASGL-----------QLDSYSTSLYEKVSIQRCESGSTEGT 266
+N+++ GYH+P AHK DS++ + K + T
Sbjct: 204 LTENFME-GYHLPVAHKATVGAWFALNETMFPEETFDSFTYQTFAKTGNATYGQAHPDNT 262
Query: 267 DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPT-------RCKVVFDYFLDGSL 319
+ ++ ++P M Y D + L P R V +D L
Sbjct: 263 TLEAEWRNTSVLPTVFPCHM---YVLAPDHLWYLTLRPKGVGEVDIRFGVAIAPEVDAML 319
Query: 320 K---DDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ A+I++ +K E V ED + EG+ G +S G+ + +E+ ++ F L
Sbjct: 320 SYADERTAWIDELVKFFEHVNTEDRQVVEGIYAGSQSNFAAPGKLS-WLEREIHDFQRYL 378
Query: 377 HCNL 380
L
Sbjct: 379 ARRL 382
>gi|392418924|ref|YP_006455529.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium chubuense
NBB4]
gi|390618700|gb|AFM19850.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium chubuense
NBB4]
Length = 454
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 17/218 (7%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YT + A E R++ R+WQ+ G D+L D+ +I + FV+ R + K+ F N
Sbjct: 38 YTSRDYAARERERIWMRAWQIAGRVDELPKVGDWKQYKILDQSFVIVRGKDEKLRGFVNA 97
Query: 98 CRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
CRH +IL TG+ K+ F+C YH W+Y L+GTL R + + L+ + V
Sbjct: 98 CRHRGNILCNARTGNAKRG-FLCQYHLWSYNLEGTLRGVLREELAGQVDKTQNSLLEVSV 156
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGS-SEILSINGIDSSLSYLCRREYTIEC 213
T+G F+ LN +A +E+LG ++L+ +D ++ + RE ++C
Sbjct: 157 DTFGGFIFLNPDPDA---------QPLSEYLGPEVVDLLAPYQLDRMVTVMDVRE-AVDC 206
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE 251
NWKV D + + GYH+ H L + L +D +TS Y+
Sbjct: 207 NWKVVMDAF-EEGYHINGIHPQLLTVLAIDP-ATSRYQ 242
>gi|398963648|ref|ZP_10679732.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM30]
gi|398149424|gb|EJM38073.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM30]
Length = 431
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|447918717|ref|YP_007399285.1| putative iron/sulfur-binding protein [Pseudomonas poae RE*1-1-14]
gi|445202580|gb|AGE27789.1| putative iron/sulfur-binding protein [Pseudomonas poae RE*1-1-14]
Length = 431
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|424925332|ref|ZP_18348693.1| Phenylpropionate dioxygenase [Pseudomonas fluorescens R124]
gi|404306492|gb|EJZ60454.1| Phenylpropionate dioxygenase [Pseudomonas fluorescens R124]
Length = 431
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|398859747|ref|ZP_10615414.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
gi|398901066|ref|ZP_10650017.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
gi|398180185|gb|EJM67771.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
gi|398236083|gb|EJN21881.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
Length = 432
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 29 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 88
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 89 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 147
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 148 YGLKPVNVKTAGGYIFISLSE 168
>gi|167031356|ref|YP_001666587.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida GB-1]
gi|166857844|gb|ABY96251.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida GB-1]
Length = 430
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +YTD +++ +F + W + G T ++ ++ + +IG +V R
Sbjct: 28 ERTYSLPQPFYTDERLFQIDMQEIFQKEWLIAGMTCEIPAKGNYITLQIGNNPILVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
GK+HAFHNVCRH S L + GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGKVHAFHNVCRHRGSRLCVSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V G ++ +++ +
Sbjct: 147 YGLKPVNVKVAGGYIFISLAE 167
>gi|389878895|ref|YP_006372460.1| dioxygenase [Tistrella mobilis KA081020-065]
gi|388529679|gb|AFK54876.1| dioxygenase [Tistrella mobilis KA081020-065]
Length = 403
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 25/297 (8%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
P++P + P + Y DP+ LA E R+ R QV ++ P D+ + I V
Sbjct: 37 RPEMPAAQ-FASPVARYADPARLARE-QRLIRRFPQVAAAAGEMTKPGDWIARDISGVPV 94
Query: 82 VVCRDDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
++ RD+ G+++AF N CRH L G+G++S F CPYH WTYG DG L + G
Sbjct: 95 LLVRDETGRVNAFINACRHRGVRLTADGCGAGRRS-FTCPYHAWTYGTDGALKALPKAYG 153
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
D + GLV L VA + + + + VD L G ++ L G
Sbjct: 154 FPDLDRAGRGLVRLAVAERAGLIWV-VTDPGLADRPVDP------LLSGVADDLEALGFA 206
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
S + + R+ + C+WK+ D + YH AH+ + + D+ + ++ + R
Sbjct: 207 SHVPH-APRDLPLACDWKLVLDGSFE-AYHFKIAHRDTIAPMFADNL--QVIDEFGLNRR 262
Query: 259 ESGSTEGTDDTHRLGSK--------AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC 307
G D ++ I+ F++PN +I V P P +C
Sbjct: 263 LYLVKAGLDPADPPAAENFVTRDWGNIFYFVFPNTLILVQPDHAQVTRVEPAGPGQC 319
>gi|398956910|ref|ZP_10677028.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM33]
gi|398149212|gb|EJM37866.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM33]
Length = 427
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKNNINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGARHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|148553855|ref|YP_001261437.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499045|gb|ABQ67299.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 418
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 143/375 (38%), Gaps = 40/375 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y D ++ +F+RSW +VG+ +L +P + + IG ++ R +G +
Sbjct: 21 PQPFYRDADLFDHDMEAIFHRSWLLVGFEAELAEPGSYLALTIGRSPILLVRQKDGTVAG 80
Query: 94 FHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
F N CRH A I A G G+ + VCPYH WTYG DG LL A R+ DF+ GL P+
Sbjct: 81 FFNSCRHRGAQICADGHGRAARLVCPYHQWTYGTDGRLLSAARMAA--DFDKDRHGLNPI 138
Query: 153 EVATWGPFVLLNMGKEAVHQ----EEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
V G V + + ++A L + SI +D + ++ E
Sbjct: 139 GVECVGGCVYVCLSPAHAPDFAPFRAALEPMLAPHRLAEARLATSIAIVDKA-NWKLVME 197
Query: 209 YTIECNWKVFCDNYLDGGYHVP---------------YAHKGLASGLQLDSYSTSLYEKV 253
EC+ C L + V YA + A+GL++ S +
Sbjct: 198 NGRECHHCAACHPELKIAFPVSAADSTEKDEVELFARYAERMAAAGLEVGPRSGDWWHVA 257
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYA----------FIYPNFMINRYGPWMDTNLVIPLA 303
+ D T + + A PN + G IP
Sbjct: 258 RFPLNPGAKSFSLDGTPLVAKPMVEACGGDIGTLRWATEPNSFCHAAGDNAFMFSAIPTG 317
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
P V+ + + KD ++ L V ME D L E QRG+ Y G
Sbjct: 318 PMETTVIAKWLVH---KDAVEGVDYDLDRLTHVWMETNLQDRELAENNQRGVNGAGYVPG 374
Query: 360 RYAPSVEQTMYHFHS 374
Y+P E+ + F S
Sbjct: 375 PYSPEAEEYVDRFVS 389
>gi|229593034|ref|YP_002875153.1| putative iron/sulfur-binding protein [Pseudomonas fluorescens
SBW25]
gi|229364900|emb|CAY52979.1| putative iron/sulfur-binding protein [Pseudomonas fluorescens
SBW25]
Length = 431
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|398920558|ref|ZP_10659372.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM49]
gi|398167733|gb|EJM55774.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM49]
Length = 427
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKNTINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|398995022|ref|ZP_10697913.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398131078|gb|EJM20406.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 427
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD I+
Sbjct: 27 SLYNDPALFEAELDKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKNNINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|384047862|ref|YP_005495879.1| Ring-hydroxylating dioxygenase, large terminal subunit [Bacillus
megaterium WSH-002]
gi|345445553|gb|AEN90570.1| Ring-hydroxylating dioxygenase, large terminal subunit [Bacillus
megaterium WSH-002]
Length = 382
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 155/364 (42%), Gaps = 42/364 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YT LE +F +SW +V + ++ +P + + R+ ++ R + + F NV
Sbjct: 23 YTSSDIFKLEKDHIFSKSWSLVAFEYEIAEPGQYITTRVEGENILITRGKDHILRGFLNV 82
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV--KEFGLVPLEV 154
CRH A + + SGK CPYH W+Y LDG L+ + ++ V + +GL + +
Sbjct: 83 CRHRGAKLCSQASGKAGVIRCPYHSWSYSLDGDLVGVPNTSHCREELVHNESYGLTSVHI 142
Query: 155 ATWGPFVLLNMGKEAVHQE-EVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYTIE 212
W V +N+ + E ++D+ + E+ + + +L R EY +E
Sbjct: 143 EVWHGMVWVNLSDNPISVEYQLDAQI-----FDRFGELYTFARYEIQNLKSAHREEYEVE 197
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRL 272
NWK+ +N+ + YH H L + L V Q G + ++
Sbjct: 198 ANWKLIVENFQE-CYHCSSIHPELTATL------PEFRSGVGTQNSVGGGAKFGNELEAF 250
Query: 273 -----GSKAIYAFIYPNFMINRYG----PWMDTNL---------VIPLAPTRCKVVFDYF 314
GS+ + + P +G P + NL +IP++ + KV+ ++
Sbjct: 251 SISGKGSRPMLKGLLPEDDRTYFGITVLPLVFINLTPDHVIIHRIIPISAEKSKVICEWL 310
Query: 315 LDGSLKDDKAFIEQSLKDS----EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMY 370
D ++ A + + KD+ +V ++D CE Q + S +Y G +EQ +
Sbjct: 311 FD---PEEMAKLNFNPKDAVELFHRVNLQDFEACEWCQENMSSKSYKEGGILVPIEQHVS 367
Query: 371 HFHS 374
HF++
Sbjct: 368 HFYN 371
>gi|398991936|ref|ZP_10695013.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399012484|ref|ZP_10714804.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398115317|gb|EJM05101.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398135876|gb|EJM24979.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 431
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|398872499|ref|ZP_10627789.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM74]
gi|398202533|gb|EJM89375.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM74]
Length = 427
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++++ DF + IG +V RD I+
Sbjct: 27 SLYNDPALFEAELDKIFYRTWVWVAHESEVRNSGDFKTATIGRRPVIVVRDKKNNINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + +E++ ++LGG+ + + G + +++
Sbjct: 147 VESYAGMVF------ASYNDEIEP---LEDFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N D GYH P HK S +
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSV 226
>gi|346643284|ref|YP_262793.2| Rieske [2Fe-2S] domain-containing protein [Pseudomonas protegens
Pf-5]
gi|341580441|gb|AAY94925.2| Rieske [2Fe-2S] domain protein [Pseudomonas protegens Pf-5]
Length = 431
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYCDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYITLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|395495290|ref|ZP_10426869.1| putative iron/sulfur-binding protein [Pseudomonas sp. PAMC 25886]
gi|395793813|ref|ZP_10473161.1| putative iron/sulfur-binding protein [Pseudomonas sp. Ag1]
gi|421142617|ref|ZP_15602591.1| 3-hydroxybutyryl-CoA dehydrogenase [Pseudomonas fluorescens BBc6R8]
gi|395342050|gb|EJF73843.1| putative iron/sulfur-binding protein [Pseudomonas sp. Ag1]
gi|404506290|gb|EKA20286.1| 3-hydroxybutyryl-CoA dehydrogenase [Pseudomonas fluorescens BBc6R8]
Length = 431
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYITLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLSE 167
>gi|378825143|ref|YP_005187875.1| Rieske 2Fe-2S family protein [Sinorhizobium fredii HH103]
gi|365178195|emb|CCE95050.1| Rieske 2Fe-2S family protein [Sinorhizobium fredii HH103]
Length = 416
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 156/374 (41%), Gaps = 42/374 (11%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP + +L ++Y+ W VG+ ++ P ++F+ ++G+ V+ RD G + A H
Sbjct: 25 AFYIDPDYYRQDLEHIWYKDWLFVGHDCEIPRPGNYFTLQVGDYPVVIVRDRQGAVRALH 84
Query: 96 NVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + T G + VCPYH WTY LDG LL A ++ + F+ E L P+
Sbjct: 85 NSCRHRGSRVCTQHKGSSAKLVCPYHQWTYELDGRLLFARQMP--EGFDPSEHSLKPVNC 142
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSS---EILSINGIDSSLSYLCRRE 208
T G ++ +++ E + + V +A LG + E + + L + RE
Sbjct: 143 ETVGGYIFISLADEPMDFQPFRDTVAGYLAPHRLGETKVAYESKIVEKGNWKLVWENNRE 202
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVPY--AH------KGLASGLQLDSYSTSLYE 251
Y N C Y + G P AH GL S ++
Sbjct: 203 CYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWERCEAAGLPSAFKIGPTGQFRMT 262
Query: 252 KVS-IQRCESGSTEGTDDTHRLGSKAIYA--------FIYPNFMINRYGPWMDTNLVIPL 302
++ I ES + G R S + A F YP + G T V+PL
Sbjct: 263 RMPLINGAESYTMSGEKAVRRQLSAGVGANGIGTLLLFHYPTTWNHILGDHAITFRVLPL 322
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCS 358
P +V + ++ KD ++ +L+D V E D + E G+ SPAY
Sbjct: 323 GPELTEVTTKWLVN---KDAVEGVDYTLEDLTHVWTETNDQDRQIVEENAFGIRSPAYQP 379
Query: 359 GRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 380 GPYSAEHEGGVMQF 393
>gi|398881018|ref|ZP_10636035.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM67]
gi|398190916|gb|EJM78125.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM67]
Length = 431
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLSE 167
>gi|398886192|ref|ZP_10641079.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM60]
gi|398190307|gb|EJM77537.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM60]
Length = 431
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLSE 167
>gi|302530697|ref|ZP_07283039.1| anthranilate 1,2-dioxygenase, large subunit [Streptomyces sp. AA4]
gi|302439592|gb|EFL11408.1| anthranilate 1,2-dioxygenase, large subunit [Streptomyces sp. AA4]
Length = 423
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP E+ ++F RSW V + +L P +F S +G +V RD G +H N
Sbjct: 22 YTDPEIFEREMTQIFERSWVWVAHESELAQPGNFKSTYVGRQPVIVTRDRKGTLHTMLNR 81
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLEVA 155
CRH AS+ SGK + F CPYH W+YGLDG L G + K E L L
Sbjct: 82 CRHRGASLCEKPSGKANGFTCPYHAWSYGLDGKLRGIPYPDGYEGVLEKGELSLKKLRTE 141
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
++G V ++ E+ + A W+ + G + L + ++ NW
Sbjct: 142 SYGGMVFATFAEDGESLEDFLGD--AKLWI----DRFMKQGGGYPIKVLGKHQFKFRGNW 195
Query: 216 KVFCDNYLDGGYHVPYAHK 234
K+ +N D GYH P H+
Sbjct: 196 KIQLENTTD-GYHFPIVHR 213
>gi|398937099|ref|ZP_10667138.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM41(2012)]
gi|398167082|gb|EJM55162.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM41(2012)]
Length = 432
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G ++ ++ + ++G+ +V R
Sbjct: 29 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMACEIPTKGNYLTLQVGKNPIIVIRGA 88
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G IHAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++KE
Sbjct: 89 EGVIHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKE 147
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 148 YGLKPVNVKTAGGYIFISLSE 168
>gi|398829153|ref|ZP_10587353.1| ring-hydroxylating dioxygenase, large terminal subunit
[Phyllobacterium sp. YR531]
gi|398218011|gb|EJN04528.1| ring-hydroxylating dioxygenase, large terminal subunit
[Phyllobacterium sp. YR531]
Length = 413
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 163/376 (43%), Gaps = 46/376 (12%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y+DP + L++ +FYR W +G+ ++ P ++F+ +IG+ V+ RD KI AFH
Sbjct: 23 AFYSDPDYFRLDMENIFYRDWLFIGHDCEVARPGNYFTVQIGDYPVVIVRDREKKIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + A+ G + VCPYH WTY LDG LL A ++ DF+ + L +
Sbjct: 83 NSCRHRGSRVCASERGSSAKLVCPYHQWTYELDGRLLFARQMG--DDFDASQHSLKTVHC 140
Query: 155 ATWGPFVLLNMGKEA---VHQEEVDSNVVANEWLGGSSEILSINGIDS---SLSYLCRRE 208
+ G ++ + + A + +A LG + + ++ L + RE
Sbjct: 141 ESIGGYIFICLAPIAPDFAATRALIEPYLAPHRLGETKVAFQSSIVEKGNWKLVWENNRE 200
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVP--YAH------KGLASGLQLDSYSTSLYE 251
Y N C + + G P AH GL S Q+D +
Sbjct: 201 CYHCAANHPELCKTFPEAPSVTGVQGSKDDPEIVAHWDKCEAAGLPSVFQIDEHGQFRAT 260
Query: 252 KVS-IQRCESGSTEG--------TDD--THRLGSKAIYAFIYPNFMINRYGPWMDTNLVI 300
+V + ES + G +DD T ++GS +Y YP + G + V+
Sbjct: 261 RVPLLHESESYTMSGKRAVARQLSDDVSTRQIGSLLLYH--YPTTWNHILGDHAISFRVL 318
Query: 301 PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAY 356
PL+ T +V + + KD ++ ++ + V +E D + E G+ SPAY
Sbjct: 319 PLSATETQVTTKWLVH---KDAVEGVDYTIDELTHVWLETNDQDRQIVEENAFGIRSPAY 375
Query: 357 CSGRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 376 EPGPYSVEHEGGVLQF 391
>gi|149914985|ref|ZP_01903514.1| Rieske 2Fe-2S domain protein, putative [Roseobacter sp. AzwK-3b]
gi|149811173|gb|EDM71010.1| Rieske 2Fe-2S domain protein, putative [Roseobacter sp. AzwK-3b]
Length = 386
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 156/373 (41%), Gaps = 35/373 (9%)
Query: 22 NPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEF 81
N + + +A P++ Y DP E + + W + + +P D +
Sbjct: 10 NVRADVSRANGLPNAHYIDPVIYDEEKQALLFSQWAGLAVAADVPEPGDAVPLEFVGMPL 69
Query: 82 VVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIK 140
++ RD +G + F N+CRH IL K + CPYH W Y G L+ + G
Sbjct: 70 LLIRDKDGDVRVFQNICRHRGMILVETPRKIEGAIRCPYHSWCYSTKGDLVATPHVGGPG 129
Query: 141 D-----FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
E GL+ + W V +N+ +A E+ S+ + W +
Sbjct: 130 QNTHDAIKRNELGLIEVRSHVWRDVVWINISGDAPAFEDAMSDAM-QRWREFELPLYH-G 187
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY---------- 245
G DS + + NWK+ +NY + YH+P+ H GL S +L+ +
Sbjct: 188 GHDSRFT------LDVNTNWKLAIENYCE-SYHLPWVHPGLNSYSRLEDHYNIEKPGEYS 240
Query: 246 --STSLYEKVSIQRCESGST--EGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
T +Y ++S E+G T + + R +A Y +YPN ++ + ++ P
Sbjct: 241 GQGTLVYRQLS---NENGDTFPDFEEVGSRWNERAEYIAVYPNVLLGTHRDHAFAIILEP 297
Query: 302 LAPTRCKVVFDYFLDGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
P R V L S+ D D+ ++ + + V EDI + EG+Q+G + + GR
Sbjct: 298 KGPERT--VEHVHLYYSVPDSDEGLRMRNSQLWKTVFEEDIFVVEGMQKGRHAAQFDGGR 355
Query: 361 YAPSVEQTMYHFH 373
++P ++ + FH
Sbjct: 356 FSPVMDSPTHCFH 368
>gi|388467740|ref|ZP_10141950.1| Rieske [2Fe-2S] domain protein [Pseudomonas synxantha BG33R]
gi|388011320|gb|EIK72507.1| Rieske [2Fe-2S] domain protein [Pseudomonas synxantha BG33R]
Length = 431
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|330812241|ref|YP_004356703.1| iron/sulfur-binding protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378953319|ref|YP_005210807.1| putative iron/sulfur binding protein [Pseudomonas fluorescens F113]
gi|423699769|ref|ZP_17674259.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327380349|gb|AEA71699.1| putative iron/sulfur-binding protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|359763333|gb|AEV65412.1| putative iron/sulfur binding protein [Pseudomonas fluorescens F113]
gi|387996332|gb|EIK57662.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 431
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|359409079|ref|ZP_09201547.1| ring-hydroxylating dioxygenase, large terminal subunit [SAR116
cluster alpha proteobacterium HIMB100]
gi|356675832|gb|EHI48185.1| ring-hydroxylating dioxygenase, large terminal subunit [SAR116
cluster alpha proteobacterium HIMB100]
Length = 362
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 24/335 (7%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ +YTDP A E +F R+WQ + L + S I E R + ++ F
Sbjct: 10 ARYYTDPQMFAREQAGLFARTWQFACHLSALPAAGCYTSFEIAGEELFALRGRDSQVRVF 69
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
+NVC+H A L +G+G+ CPYH W+Y +G+L A + + E L +
Sbjct: 70 YNVCQHRAHQLVSGTGRAPTITCPYHAWSYDFEGSLRAAPNLDVVAGVEASEICLTEVRC 129
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
+ F+ +N+ A + NV A +W+ +E+ + + E +
Sbjct: 130 EAFLGFLFVNLDPGAQPMDSWFPNVRAELEDWVPNWAELKPLEWV----------EIPEK 179
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL------QLDSYSTSLYEKVSIQRCESGSTEGT 266
CNWKV +NY + YH H ++G+ + L Q ES S +
Sbjct: 180 CNWKVSVENYSE-CYHCALNHLTFSNGVVKPETYDIQPQGKCLRHTTECQNLESMSYDIH 238
Query: 267 DDTHRLGSKAIYAFIYPNFMINRY-GPWMDTNLVIPLAPTRCKVVFDYF-LDGSLKDDKA 324
+ + +++P F Y G ++T P + V ++ ++G+ +D
Sbjct: 239 SGFAHFDEYSSW-YLWPLFSFQVYPGNVLNTYHWRAHGPDQVTVWRGWYSVNGA--EDAR 295
Query: 325 FIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
+ +++D + EDI L E VQRGL+S Y G
Sbjct: 296 IRKLAVQDRQTTVEEDIHLVESVQRGLQSRGYRPG 330
>gi|146309151|ref|YP_001189616.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas mendocina
ymp]
gi|421505766|ref|ZP_15952701.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas mendocina
DLHK]
gi|145577352|gb|ABP86884.1| Rieske (2Fe-2S) domain protein [Pseudomonas mendocina ymp]
gi|400343463|gb|EJO91838.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas mendocina
DLHK]
Length = 430
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F++ W + G T ++ +F + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYNDERLFQIDMQEIFHKEWLIAGMTCEIPTKGNFITLQLGDNPILVVRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G+IHAFHNVCRH S L + GK + VCPYH WTY LDG LL A G DF + +
Sbjct: 88 EGQIHAFHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-ADFKLSD 146
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
+ L P+ + G F+ +++ ++ +E+L G + + ++++ +
Sbjct: 147 YNLKPVHCKSAGGFIFISLA---------ENPPAIDEFLAGLAHYMEPYDMENT-KVAVQ 196
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
+ NWK+ +N + YH +H L + L
Sbjct: 197 SVMPEKANWKLVIENNRE-CYHCNGSHPELLNTL 229
>gi|408479421|ref|ZP_11185640.1| putative iron/sulfur-binding protein [Pseudomonas sp. R81]
Length = 431
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLSE 167
>gi|77461437|ref|YP_350944.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas fluorescens
Pf0-1]
gi|77385440|gb|ABA76953.1| putative iron/sulfur-binding protein [Pseudomonas fluorescens
Pf0-1]
Length = 430
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 27 ERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYITLQIGKNPIIVIRGA 86
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 87 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 145
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 146 YGLKPVNVKTAGGYIFISLAE 166
>gi|347538231|ref|YP_004845655.1| anthranilate 1,2-dioxygenase, large subunit [Pseudogulbenkiania sp.
NH8B]
gi|345641408|dbj|BAK75241.1| anthranilate 1,2-dioxygenase, large subunit [Pseudogulbenkiania sp.
NH8B]
Length = 462
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 26/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + ++ +P DF + R G + +V R
Sbjct: 22 PTEGVYRMAREMFTEPELFELEMEFIFEKNWIYACHESEIPNPHDFITLRAGRMPMIVTR 81
Query: 86 DDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITG--IKDF 142
D NG ++A N C+H + L S G +S F CP+H W Y DG LLK + G +DF
Sbjct: 82 DGNGGLNAMINACQHRGATLTRLSKGNQSTFTCPFHAWCYKNDGRLLK-VKAPGEYCEDF 140
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ GL +A++ FV +++ + + ++LG + + S
Sbjct: 141 DKSARGLKKARIASYKGFVFISL--------DANGRDTLEDYLGDARVFFDMMVAQSPTG 192
Query: 203 YL----CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
L + YT + NWK+ +N LD GYHV H + +Q + + Q+
Sbjct: 193 ELEVLPGKSTYTFDGNWKLQNENGLD-GYHVSTVHYNYVATVQ-------HRQGANAQKG 244
Query: 259 ESGSTEGTDDTHRLGS 274
E+GS GT D +LG+
Sbjct: 245 EAGS--GTLDYSKLGA 258
>gi|393719461|ref|ZP_10339388.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas echinoides
ATCC 14820]
Length = 456
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 150/388 (38%), Gaps = 58/388 (14%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+ +L P + YT +L +F +SW VG+ +L+ P D+ S IG +V
Sbjct: 69 PVGHSL--PQALYTGQEAFEFDLAAIFGQSWLFVGFEAELRQPGDYLSFMIGSWPVLVVH 126
Query: 86 DDNGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
+G + AFHN CRH SIL G G + VCPYH WTYGLDG LL A R+ I D
Sbjct: 127 GRDGDLRAFHNSCRHRGSILCKPGEGHVARLVCPYHSWTYGLDGRLLAAGRMPEIFDKGE 186
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVD-SNVVANEWLGGSSEILSINGIDSSLSY 203
+ LE F+ L + D + ++A LG +
Sbjct: 187 HSLKPIHLERVAGAVFICLAETPPDIATMRRDLTPLLAPHNLGHAK-------------- 232
Query: 204 LCRREYTIE-CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE--- 259
L + +E NWK+ +N + YH H L+ +++ + + + R E
Sbjct: 233 LAHQATLVEYANWKLVMENGRE-CYHCASGHPELSRSFPINASAYFDFADDTATRFERRM 291
Query: 260 ---------------------------SGSTEGTDDTHRL-------GSKAIYAFIYPNF 285
+ ST+G +L + ++ I PN
Sbjct: 292 ADLAMPMGPVGEDWWQAVRFPLNDGTVAMSTDGQFTVKKLMCDIGGGDTGSLRWAIEPNN 351
Query: 286 MINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILC 344
+ + P++PT VV + + + + SL D + ++D L
Sbjct: 352 FCHSTSEYTFAFSAYPVSPTETHVVSKWLVHEDAVEGVDYDIASLTDLWTRTNLQDKELA 411
Query: 345 EGVQRGLESPAYCSGRYAPSVEQTMYHF 372
E Q G+ SP Y G Y+P E F
Sbjct: 412 ENNQLGVNSPGYTPGPYSPDAESLTLRF 439
>gi|333902407|ref|YP_004476280.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Pseudomonas
fulva 12-X]
gi|333117672|gb|AEF24186.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudomonas fulva 12-X]
Length = 430
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D L++ +F++ W + G T ++ ++ + +IG +V R
Sbjct: 28 ERTFSLPQPFYNDERVFQLDMQEIFHKEWLIAGMTCEIPAKGNYLTLQIGNNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VCPYH WTY +DG LL A G DFN+ +
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCPYHQWTYEVDGRLLFAGTEMG-ADFNLAD 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+ L P+ T G ++ +++ +
Sbjct: 147 YNLKPVNCKTAGGYIFISLAE 167
>gi|425902017|ref|ZP_18878608.1| Rieske [2Fe-2S] domain protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892715|gb|EJL09192.1| Rieske [2Fe-2S] domain protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 431
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYCDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYMTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|255293129|dbj|BAH90222.1| ring hydroxylating dioxygenase alpha subunit [uncultured bacterium]
Length = 447
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFNVKEFGLV-PLEV 154
C H A++ G + F CPYHGW + G L F ++ L P +V
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFGIPGKNAYGPAFKARDMHLARPAQV 152
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRREYT 210
A++ F+ + EA E LG ++ L NG ++ + +
Sbjct: 153 ASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQRFR 203
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGL 236
+ CNWK+ DN D GYHVP++H+ L
Sbjct: 204 VGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|254464603|ref|ZP_05078014.1| rieske (2Fe-2S) domain protein [Rhodobacterales bacterium Y4I]
gi|206685511|gb|EDZ45993.1| rieske (2Fe-2S) domain protein [Rhodobacterales bacterium Y4I]
Length = 411
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 168/388 (43%), Gaps = 51/388 (13%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++YTDP L L++ ++FYR W ++ +F + ++G ++ R +G++ AF
Sbjct: 22 QAFYTDPGVLDLDMRQIFYREWLFAIPACEIPKAGNFVTHQVGAYNVIIVRGTDGEVRAF 81
Query: 95 HNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HN CRH S++ G VCPYH WTY LDG+LL A + +F+ + GL P+
Sbjct: 82 HNACRHRGSVVCKAKKGNSPKLVCPYHQWTYELDGSLLWARDMG--PEFDASKHGLKPVH 139
Query: 154 VATWGPFVLLNMGKE--------AVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
+ + + E AV + ++ + + N + S I+ NG + L +
Sbjct: 140 CRDLAGLIYICLADEAPDFDAFAAVARPYLEPHDLGNAKVAYESSIIE-NG-NWKLVWEN 197
Query: 206 RRE-YTIECNWKVFCDNY--------LDGGYHVPYAHK--------GLASGLQLDSYSTS 248
RE Y N C + ++GG P+ K G+ + Q+ +
Sbjct: 198 NRECYHCGGNHPSLCRTFPEDPSVTGVEGGETPPHLQKHFDRIEAAGIPAQFQIGARGQY 257
Query: 249 LYEKVSIQR-CESGSTEGTDDTHRLGSKAIYA-------FIYPNFMINRYGPWMDTNLVI 300
++ + ES + +G + + +A F YP N + P D ++V
Sbjct: 258 RVARMPLNEGAESYTMDGKAAVAKKLGRVPFADAGTLLKFHYPT-TWNHFLP--DHSIVF 314
Query: 301 ---PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDIILCEGVQRGLES 353
P++PT +V + + KD + LK +V + ED I+ E QRG+ S
Sbjct: 315 RVTPISPTETEVTTKWLVH---KDAVEGQDYDLKRLTEVWVATNDEDRIVVEDNQRGINS 371
Query: 354 PAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
PAY G Y+ E + F + +LT
Sbjct: 372 PAYEPGPYSEVQESGVIQFSNWYAEHLT 399
>gi|440231655|ref|YP_007345448.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
gi|440053360|gb|AGB83263.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
Length = 440
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 16/244 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP+ +++ VF + W VG T ++ D+F+ IG+ +V RD +G ++A
Sbjct: 35 PQPLYNDPTMFRIDMEEVFQKEWLFVGMTSEIPKKGDYFTLEIGQNPVLVVRDADGAVNA 94
Query: 94 FHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH S I GK + VCPYH WTY L G LL A G F ++ GL P
Sbjct: 95 FHNTCRHRGSRICQQPRGKVANLVCPYHQWTYDLKGNLLFAGTHMG-DGFEPRQHGLKPA 153
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
T G F+ + + E V + + D ++L E ++ ++++ E +
Sbjct: 154 HCRTAGGFIFVCIA-EQVPESDFD------DFLATLEEYMAPYDVENT-KLATESEMYEK 205
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL-----QLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK+ +N + YH +H L + L D +T + Q+ E EG
Sbjct: 206 ANWKLVLENNRE-CYHCAGSHPELLNTLLEWDDTNDPRATPEFIAYYNQQAEQWDQEGIP 264
Query: 268 DTHR 271
H+
Sbjct: 265 HRHQ 268
>gi|389682739|ref|ZP_10174076.1| Rieske [2Fe-2S] domain protein [Pseudomonas chlororaphis O6]
gi|388553330|gb|EIM16586.1| Rieske [2Fe-2S] domain protein [Pseudomonas chlororaphis O6]
Length = 431
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYCDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYMTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|399007507|ref|ZP_10710013.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
gi|398119844|gb|EJM09519.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
Length = 431
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYCDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYMTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|167567909|ref|ZP_02360825.1| benzoate 1,2-dioxygenase, alpha subunit [Burkholderia oklahomensis
EO147]
Length = 427
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+E PS +Y DP EL R+FYR+W V + +L +P DF + IG +V RD
Sbjct: 18 VESDRIAPSMYY-DPELFEAELERIFYRTWIWVAHDSELPNPGDFVTTTIGRQPVIVVRD 76
Query: 87 DNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLK---ATRITGIKDF 142
NG ++ N CRH A++ G F CPYH W+Y LDGTL G+ D
Sbjct: 77 RNGDVNVLQNRCRHRGATVCEAHRGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDK 136
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILSINGIDSSL 201
N + LV L V T V + ++ E +D + A W+ ++ G +
Sbjct: 137 N--DLPLVKLRVGTCQGLVFASFNQDV---EPLDDFLGAAKPWI----DLFMKQGAGYPI 187
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
++ + NWK+ +N D YH P HK
Sbjct: 188 KSNGEHKFKFKGNWKIQLENTTD-LYHFPVVHK 219
>gi|407717434|ref|YP_006838714.1| rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cycloclasticus sp. P1]
gi|407257770|gb|AFT68211.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cycloclasticus sp. P1]
Length = 407
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 144/366 (39%), Gaps = 58/366 (15%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG--EVEFVVCRDDNGKI 91
PS Y+ +F E +F ++W + G + + D+ + I EV ++ RD +G++
Sbjct: 23 PSDHYSSQAFFEQEKENIFKKTWLMAGRESDVAEHGDYITYFIDALEVSIIITRDKHGQV 82
Query: 92 HAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
+AF+N C H A +L GK + C +HGW + +G L DF+ + GL
Sbjct: 83 NAFYNACTHRGAHVLTEPCGKAKFMTCGFHGWVFDAEGQLADVPGEDLFGDFDKSKLGLK 142
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS--INGIDSSLSYLCRRE 208
P+ V WG FV +N+ + +V E+L +E + D + SY R
Sbjct: 143 PVSVDVWGGFVFINLDPK--------PSVPLKEYLQPLNESFDKYLGNKDWTWSYGWRS- 193
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY----------------------- 245
T NWK+ D ++ GYHV H+ +G +Y
Sbjct: 194 -TFNANWKLLVDAQIE-GYHVDQTHRNTIAGAIPGTYAPADVYPDSIGVPARVCAYRPEE 251
Query: 246 ----------------STSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINR 289
+TSLY K + +D H L Y ++PN ++
Sbjct: 252 MMGIQTDVALLSAKHGATSLYTKSENEFSADDGAGVLNDDHPLWIFDAY-LLFPNVVLFI 310
Query: 290 YGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFI--EQSLKDSEQVQMEDIILCEGV 347
+ +P++P +C D+F G +++ EQ V ED+ EG+
Sbjct: 311 QKGQILVQRTLPISPDKCLWEVDFFHTGEIENFGQLFNSEQGRIQIRDVLTEDLYTAEGI 370
Query: 348 QRGLES 353
Q +
Sbjct: 371 QMNFNA 376
>gi|423093268|ref|ZP_17081064.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens Q2-87]
gi|397882652|gb|EJK99139.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens Q2-87]
Length = 431
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|384540280|ref|YP_005724363.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti SM11]
gi|336035623|gb|AEH81554.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti SM11]
Length = 412
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 160/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y P AL+L +FYR W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYVSPEVYALDLQHIFYREWLYAVPACQLARTGSYVTLRVGAYEVVIVRSRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGSTE 264
NWK+ +N + YH H L LD + +V RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQVHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|148553667|ref|YP_001261249.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148498857|gb|ABQ67111.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 418
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 20 EFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEV 79
+F + ++ LTP YTD + E+ R+F +W V + + F + +G
Sbjct: 5 DFATLVRDDRVLTP---MYTDEAIFEEEMDRIFKNTWVWVAHASDVPTGNTFKTSWVGRE 61
Query: 80 EFVVCRDDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG 138
+V RD GKIH N CRH AS+ GK S FVCPYHGW+Y +DG L K I+G
Sbjct: 62 PVIVTRDKQGKIHTLLNRCRHRAASVCEKRKGKASVFVCPYHGWSYDVDGKLRKVPHISG 121
Query: 139 IKD-FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI--- 194
+ + ++GLV L + + A ++++ V E+LG + + + +
Sbjct: 122 YGEGLDTDDYGLVSLRTEEYNGMIF------ATFKDDIQPLV---EFLGSAKKWIDLFMK 172
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
G + L + NWK+ +N D YH P HK L
Sbjct: 173 QGGGYGVKTLGEHRFRFPGNWKIQLENTTD-AYHFPIVHKTFLDSL 217
>gi|374703321|ref|ZP_09710191.1| iron/sulfur-binding protein [Pseudomonas sp. S9]
Length = 430
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y D +++ +F++ W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYNDERLFQIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGDNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG L+ A G DF++K+
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLIFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ T G ++ +++ +
Sbjct: 147 YGLKPVNCKTAGGYIFISLAE 167
>gi|380309761|ref|YP_005351573.1| DcaA1 [Comamonas testosteroni]
gi|365818630|gb|AEX00425.1| DcaA1 [Comamonas testosteroni]
Length = 448
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H A++ G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|410688252|ref|YP_006961403.1| DcaA1 [Delftia acidovorans]
gi|365818692|gb|AEX00486.1| DcaA1 [Delftia acidovorans]
Length = 448
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H A++ G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|421169429|ref|ZP_15627447.1| hypothetical protein PABE177_4224 [Pseudomonas aeruginosa ATCC
700888]
gi|404526420|gb|EKA36633.1| hypothetical protein PABE177_4224 [Pseudomonas aeruginosa ATCC
700888]
Length = 380
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 162/377 (42%), Gaps = 78/377 (20%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF
Sbjct: 12 AAHYTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAF 70
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVP 151
N C H S + T + VCPYH W++G +G L+ + + F+V+E GL
Sbjct: 71 LNQCPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSVEERARIGLRK 129
Query: 152 LEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L + G + +N+ + + +E+ D +L E+ S +D+ L Y C +
Sbjct: 130 LHLEEVGQLLFVNLADDPLPLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HK 179
Query: 211 IECNWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS-------------- 244
+ NWK+ +N D HVP+ H +GLA + S
Sbjct: 180 VRYNWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQEGETPEL 238
Query: 245 YSTSLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRY 290
S S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 239 RSLSFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQY 293
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEG 346
P+AP + + KD K A + ++ V ED ++ E
Sbjct: 294 D---------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLER 343
Query: 347 VQRGL--ESPAYCSGRY 361
+Q GL SP + G Y
Sbjct: 344 LQEGLGAHSPPFMHGDY 360
>gi|410688337|ref|YP_006961487.1| DcaA1 [Delftia acidovorans]
gi|410688600|ref|YP_006961868.1| CaoA1 [Delftia acidovorans]
gi|327244683|gb|AEA41912.1| CaoA1 [Delftia acidovorans]
gi|365818863|gb|AEX00655.1| DcaA1 [Delftia acidovorans]
Length = 448
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H A++ G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|334319509|ref|YP_004552068.1| Rieske (2Fe-2S) domain-containing protein [Sinorhizobium meliloti
AK83]
gi|334321332|ref|YP_004557872.1| Rieske (2Fe-2S) domain-containing protein [Sinorhizobium meliloti
AK83]
gi|334099936|gb|AEG57945.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sinorhizobium meliloti
AK83]
gi|334100120|gb|AEG58128.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sinorhizobium meliloti
AK83]
Length = 412
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 160/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YT P AL+L +FYR W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYTSPEVYALDLEHIFYREWLYAVPACQLARTGSYVTLRVGAYEVVIVRSRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGSTE 264
NWK+ +N + YH H L LD + + RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQAHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|227821065|ref|YP_002825035.1| dioxygenase, alpha-subunit [Sinorhizobium fredii NGR234]
gi|227340064|gb|ACP24282.1| putative dioxygenase, alpha-subunit [Sinorhizobium fredii NGR234]
Length = 416
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 164/382 (42%), Gaps = 58/382 (15%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP + +L ++Y+ W VG+ ++ P ++F+ ++G+ V+ RD G + A H
Sbjct: 25 AFYIDPDYYRQDLEHIWYKDWLFVGHDCEIPRPGNYFTLQVGDYPVVIVRDRQGAVRALH 84
Query: 96 NVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + T G + VCPYH WTY LDG LL A ++ + F+ E L P+
Sbjct: 85 NSCRHRGSRVCTQHKGSSAKLVCPYHQWTYELDGRLLFARQMP--EGFDPSEHSLKPVNC 142
Query: 155 ATWGPFVLLNMGKEAVHQE---EVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRRE 208
T G ++ +++ E + + E + +A LG + E + + L + RE
Sbjct: 143 ETVGGYIFVSLADEPMDFQPFRETVAGYLAPHRLGETKVAYESKIVEKGNWKLVWENNRE 202
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVPY--AH------KGLASGLQL--------- 242
Y N C Y + G P AH GL S ++
Sbjct: 203 CYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWERCEAAGLPSAFKIGPTGQFRMT 262
Query: 243 --------DSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWM 294
+SY+ S E+ Q+ +G D +R+G+ + F YP + G
Sbjct: 263 RMPLINGAESYTMS-GERAVRQQLSAGV-----DANRIGT--LLLFHYPTTWNHILGDHA 314
Query: 295 DTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRG 350
T V+PL P +V + ++ KD ++ +L+D V E D + E G
Sbjct: 315 ITFRVLPLGPELTEVTTKWLVN---KDAVEGVDYTLEDLTHVWTETNDQDRQIVEENAFG 371
Query: 351 LESPAYCSGRYAPSVEQTMYHF 372
+ SPAY G Y+ E + F
Sbjct: 372 IRSPAYQPGPYSAEHEGGVMQF 393
>gi|54290080|dbj|BAD61049.1| large subunit of aniline dioxygenase [Delftia acidovorans]
Length = 448
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H A++ G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|345894481|gb|AEO20097.1| dichloroaniline dioxygenase large subunit [Variovorax sp. SRS16]
Length = 448
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H A++ G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|30039668|gb|AAO38208.1| Large subunit of dioxygenase [Delftia acidovorans]
Length = 448
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H A++ G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|380310026|ref|YP_005352103.1| DcaA1 [Comamonas testosteroni]
gi|365818777|gb|AEX00570.1| DcaA1 [Comamonas testosteroni]
Length = 448
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H A++ G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGATVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|339275449|dbj|BAK48593.1| putative naphthalene dioxygenase large subunit [Paenibacillus sp.
TSY30]
Length = 442
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 27 IEKALTPPSSW-YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
+E+ L P W TDP +E+ ++F R+WQ++G+ ++++P + + I ++ R
Sbjct: 17 LERGLFP--QWVLTDPDIYNIEMEQIFLRTWQLLGHESEIREPGQYVTRWIVNDPVLLVR 74
Query: 86 DDNGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLL---KATRITGIKD 141
+ G+I AF N C H L T +GKK F CPYHGW+Y LDG L+ +I G ++
Sbjct: 75 NGGGEIKAFLNSCTHRGVHLCTADAGKKKSFTCPYHGWSYNLDGDLIGIVAGDKIYG-EE 133
Query: 142 FNVKEFGLVPL-EVATWGPFVLLNMGKEAVHQEEV--DSNVVANEWLGGSSEILSINGID 198
+ K++GL P+ V + + N+ +A+ EE + + LG S + + G+
Sbjct: 134 MDKKDWGLRPIPRVEVYKGLIFANLDPQAMPLEEFLGEFRWYLDIMLGRSDGGMEVRGVP 193
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+ + + NWK+ +N++D YHV +H+
Sbjct: 194 --------QRWVVHANWKMVSENFVD-PYHVQTSHR 220
>gi|404318764|ref|ZP_10966697.1| Rieske (2Fe-2S) domain-containing protein [Ochrobactrum anthropi
CTS-325]
Length = 415
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+YTDP + L+L +FY+ W VG+ +L + + +IG V+ RD G I AF
Sbjct: 22 QKFYTDPEYHKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVVIVRDAQGGIRAF 81
Query: 95 HNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HN CRH S I A G + VCPYH WTY LDG LL A ++ DF E+GL P+
Sbjct: 82 HNSCRHRGSRICAAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPAEYGLKPVH 139
Query: 154 VATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 140 CETVAGYIYVCVAEEA 155
>gi|153009042|ref|YP_001370257.1| Rieske (2Fe-2S) domain-containing protein [Ochrobactrum anthropi
ATCC 49188]
gi|151560930|gb|ABS14428.1| Rieske (2Fe-2S) domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 415
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+YTDP + L+L +FY+ W VG+ +L + + +IG V+ RD G I AF
Sbjct: 22 QKFYTDPEYHKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVVIVRDAQGGIRAF 81
Query: 95 HNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HN CRH S I A G + VCPYH WTY LDG LL A ++ DF E+GL P+
Sbjct: 82 HNSCRHRGSRICAAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPAEYGLKPVH 139
Query: 154 VATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 140 CETVAGYIYVCVAEEA 155
>gi|398831809|ref|ZP_10589985.1| ring-hydroxylating dioxygenase, large terminal subunit
[Phyllobacterium sp. YR531]
gi|398211511|gb|EJM98129.1| ring-hydroxylating dioxygenase, large terminal subunit
[Phyllobacterium sp. YR531]
Length = 410
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 20/254 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S+Y DP A ++ RVF R W +G+ + D DF +I +V R ++G IHAF
Sbjct: 33 SFYLDPDIYARDMERVFRRHWHCIGHASIIPDAGDFELFKIDSEAVIVSRTEDGSIHAFL 92
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
NVCRH A + G +FVCPYH WTY DG+ L+A R+ +DF+ GL L V
Sbjct: 93 NVCRHRGAEVCTKPKGNARFFVCPYHAWTYTNDGS-LRAARLMP-RDFDRTAHGLKKLHV 150
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECN 214
+ + E + ++ ++ + D+ +++ R Y ++ N
Sbjct: 151 RVVEGLIFICFADEPLDFSIIEQSL--------RTTCGQYGWADAKVAH--RETYPVDAN 200
Query: 215 WKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE---KVSIQRCESGSTEGTDD--- 268
WK+ +NY++ YH AH + L+ + + E ++ + C G T D
Sbjct: 201 WKLAVENYVE-CYHCGPAHPEYSQTHALEQPAEKIVELNARMEQRTCALGIDIATGDHWQ 259
Query: 269 THRLGSKAIYAFIY 282
+ G + I+ F Y
Sbjct: 260 SSAQGQETIHTFRY 273
>gi|398910521|ref|ZP_10655075.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM49]
gi|398185645|gb|EJM73042.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM49]
Length = 431
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++ +
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|398927012|ref|ZP_10662779.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM48]
gi|398170265|gb|EJM58216.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM48]
Length = 431
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++ +
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|339483543|ref|YP_004695329.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Nitrosomonas
sp. Is79A3]
gi|338805688|gb|AEJ01930.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Nitrosomonas
sp. Is79A3]
Length = 368
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 153/376 (40%), Gaps = 52/376 (13%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E ++ P WY DP L +E +F + VG+ + + D++ V+ R+
Sbjct: 12 EMSVQLPIDWYLDPKILEIEKRILFDQGPGYVGHEVMVPNVGDYYVPEWMNNAKVLVRNG 71
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G I NVCRH ++L G VCP H WTY LDG LL A N+ +
Sbjct: 72 QG-IELLSNVCRHRQALLLKGRSSTKSIVCPIHRWTYALDGKLLGAPHFKQNPCLNLDK- 129
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
PL+ +W LL GK V Q+ + +V+ + S +L ID
Sbjct: 130 --TPLQ--SWNG--LLFNGKRKVSQDMANLSVLKD--FDFSGYLLDRIQID--------- 172
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL---QLD-------SYSTSLYEKVSIQR 257
EY CNWK F + YL+ YHV H GL+ + QLD S T + QR
Sbjct: 173 EYP--CNWKTFIEVYLE-DYHVDPFHPGLSHFVNTEQLDWEFGDWYSVQTIAIDNARFQR 229
Query: 258 CES-----------GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTR 306
S TEG H AI+ YPN M+ Y + + ++P
Sbjct: 230 PGSPVYAKWHEQVLQQTEGKTPPH----GAIWLLYYPNIMLEWYPHTLVISTILPTGVES 285
Query: 307 CKVVFDYFLDGSLKD-DKAFIEQSLKDSEQVQMEDIILCEGVQRG----LESPAYCSGRY 361
C V +++ + ++ F+E ++ +ED +C+ + G E +G Y
Sbjct: 286 CTNVVEFYYPEEIALFERDFVEAEQAAYKETALEDDEICKLMTAGRRALYEQNRNETGPY 345
Query: 362 APSVEQTMYHFHSLLH 377
+E M HFH L
Sbjct: 346 QIPMEAGMEHFHQFLQ 361
>gi|384532267|ref|YP_005717871.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Sinorhizobium meliloti BL225C]
gi|333814443|gb|AEG07111.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sinorhizobium meliloti
BL225C]
Length = 412
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 161/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YT P AL+L +FY+ W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYTSPEVYALDLQHIFYKQWLYAVPACQLAKAGSYTTLRVGAYEVVIVRGRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGSTE 264
NWK+ +N + YH H L LD + +V RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQVHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|339017884|ref|ZP_08644030.1| ring hydroxylating dioxygenase [Acetobacter tropicalis NBRC 101654]
gi|338752999|dbj|GAA07334.1| ring hydroxylating dioxygenase [Acetobacter tropicalis NBRC 101654]
Length = 416
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
S Y++P +E+ R+F +W V + L +P +F + +G +V RD G +H
Sbjct: 8 GSIYSNPELYDMEMDRIFMHNWIWVAHRSDLPEPGNFITTFVGPHPVIVSRDRKGDVHVM 67
Query: 95 HNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK-DFNVKEFGLVPL 152
N CRH A++ SG + FVCPYHGW YGLDG L G + K++ LV L
Sbjct: 68 LNRCRHRGATVCERKSGTGASFVCPYHGWAYGLDGALRGVPYQEGYSGQLDKKKYPLVSL 127
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREY 209
V + + K S + + WLG + ++ G + + ++
Sbjct: 128 RVEEYNGLIFATFDK---------SIMSLDAWLGRAKPWIDLFMKQGAGWPVKTMGEHKF 178
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
T NWK+ +N D YH P HK + ++ +T
Sbjct: 179 TFPGNWKIQLENTTD-AYHFPIVHKSFLDSVDEETQNT 215
>gi|384541068|ref|YP_005725151.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti SM11]
gi|336036411|gb|AEH82342.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti SM11]
Length = 412
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 160/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y P AL+L +FYR W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYVSPEVYALDLQHIFYREWLYAVPACQLARTGSYVTLRVGAYEVVIVRSRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFHASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGSTE 264
NWK+ +N + YH H L LD + +V RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQVHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|238025433|ref|YP_002909665.1| anthranilate 1,2-dioxygenase subunit alpha [Burkholderia glumae
BGR1]
gi|237880098|gb|ACR32430.1| anthranilate 1,2-dioxygenase subunit alpha [Burkholderia glumae
BGR1]
Length = 462
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 26/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + ++ P DF + R G +V R
Sbjct: 22 PDEGVYRIARDMFTEPQLFDLEMEFIFEKNWIYACHESEIPQPHDFVTMRAGRQPLIVSR 81
Query: 86 DDNGKIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI--KDF 142
NG+++A N C+H + L G G +S F CP+H W Y DG L+K + G +DF
Sbjct: 82 GGNGELNAMINACQHRGATLTRMGKGNQSTFTCPFHAWCYKSDGRLVK-VKAPGEYGEDF 140
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ + GL +A++ FV +++ E ++LG + L + S
Sbjct: 141 DKSKRGLKKARIASYKGFVFVSLDAAGTDTLE--------DYLGDARVFLDMMVAQSPTG 192
Query: 203 YL----CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
L + YT E NWK+ +N LD GYHV H +Y ++ +
Sbjct: 193 ELEVLPGKSTYTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQEANAR 242
Query: 259 ESGSTEGTDDTHRLGS 274
+ G+T GT D +LG+
Sbjct: 243 KGGATAGTLDYSKLGA 258
>gi|407368193|ref|ZP_11114725.1| putative iron/sulfur-binding protein [Pseudomonas mandelii JR-1]
Length = 431
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMACEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G IHAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++K+
Sbjct: 88 EGVIHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMKQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLSE 167
>gi|410089783|ref|ZP_11286393.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
gi|409762908|gb|EKN47901.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
Length = 432
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTYSLPQPFYSDERLFEIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQIGKNPILVVRGP 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G ++AFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++ +
Sbjct: 88 DGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGSEMG-ADFDMSQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
FGL P+ V T G ++ +++ +
Sbjct: 147 FGLKPVNVKTAGGYIFISLAE 167
>gi|294146800|ref|YP_003559466.1| putative dioxygenase [Sphingobium japonicum UT26S]
gi|292677217|dbj|BAI98734.1| putative dioxygenase [Sphingobium japonicum UT26S]
Length = 409
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 22 NPQIPIEKALTP------------PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
N P+E + P P Y P F A E R+F R+W ++G ++L P+
Sbjct: 4 NSATPVESPIRPATAEGTGGGLSVPLEPYRSPEFFAAERERLFGRAWLLMGRIEELPTPR 63
Query: 70 DFFSGRIG--EVEFVVCRDDNGKIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGL 126
R+ ++ RD + AFHN+C H A++L T SG VC YH W++ L
Sbjct: 64 SHVVKRVDICNASILITRDGGDIVRAFHNICPHRANLLVRTESGSGGTLVCNYHNWSFSL 123
Query: 127 DGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG 186
DG+L + + K+ GL P+ ++ W ++ +N+ E E E+LG
Sbjct: 124 DGSLKGVPGESMFGGLDKKKCGLKPIALSVWEGWIFINLDPEPAMTLE--------EFLG 175
Query: 187 GSSEILSINGIDSSLSY-----LCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
+ L S LSY E ++CNWKV D + + YH+P H+
Sbjct: 176 DMAPYL------SGLSYPYADTPVVLEVKVKCNWKVVMDAFAE-AYHLPALHR 221
>gi|390166061|ref|ZP_10218329.1| putative dioxygenase [Sphingobium indicum B90A]
gi|389591080|gb|EIM69060.1| putative dioxygenase [Sphingobium indicum B90A]
Length = 409
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG--EVEFVVCRDD 87
L+ P Y P F A E R+F R+W ++G ++L P+ R+ ++ RD
Sbjct: 24 GLSVPLEPYRSPEFFAAERERLFGRAWLLMGRIEELPTPRSHVVKRVDICNASILITRDG 83
Query: 88 NGKIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ AFHN+C H A++L T SG VC YH W++ LDG+L + + K+
Sbjct: 84 GDIVRAFHNICPHRANLLVRTESGSGGTLVCNYHNWSFSLDGSLKGVPGESMFGGLDKKK 143
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY--- 203
GL P+ ++ W ++ +N+ E E E+LG + L S LSY
Sbjct: 144 CGLKPIALSVWEGWIFINLDPEPAMTLE--------EFLGDMAPYL------SGLSYPYA 189
Query: 204 --LCRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
E ++CNWKV D + + YH+P H+
Sbjct: 190 DTPVVLEVKVKCNWKVVMDAFAE-AYHLPALHR 221
>gi|333992085|ref|YP_004524699.1| dioxygenase [Mycobacterium sp. JDM601]
gi|333488053|gb|AEF37445.1| dioxygenase [Mycobacterium sp. JDM601]
Length = 458
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 14/217 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ YT F A+E ++ ++WQV G ++L D+ RI + F+V R + KI
Sbjct: 29 PTERYTSAEFAAVERESIWLKTWQVAGRVEELAKTGDWKQYRISDQSFIVVRGKDDKIRG 88
Query: 94 FHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
F N CRH ++L A G+ K++ F+C YH W+Y L G L R + GL+
Sbjct: 89 FVNACRHRGNLLCPEARGNTKRN-FLCNYHLWSYDLQGKLTGMLREDLAGPIDKDTHGLI 147
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ V T+ F+ LN +A E + +A +L+ +D ++ + E
Sbjct: 148 EVPVDTFAGFIFLNPDPQAAPLSEFIGDEIAT--------MLAPYHLDEMVTVMDVTE-R 198
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
I+CNWKV D + + GYH+ H L + +D +T
Sbjct: 199 IDCNWKVVMDAFQE-GYHINGIHPQLLRVINIDPATT 234
>gi|398870976|ref|ZP_10626295.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM74]
gi|398207166|gb|EJM93920.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM74]
Length = 431
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + +IG+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPAKGNYLTLQIGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++ +
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|359950647|gb|AEV91088.1| CaoA1 [synthetic construct]
gi|359950688|gb|AEV91129.1| CaoA1 [synthetic construct]
Length = 448
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP+ A E+ V+ SW + + ++ +P DF +G E +V RD+ G+I F N
Sbjct: 33 YTDPAIFAREMDHVYAASWVYLAHESEIPEPNDFRQAWLGTREVIVTRDEEGQIRVFSNR 92
Query: 98 CRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-P 151
C H S + G + F CPYHGW + G L I G F ++ L P
Sbjct: 93 CSHRGSTVCREHQGNAANFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKARDMHLARP 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI----NGIDSSLSYLCRR 207
+VA++ F+ + EA E LG ++ L NG ++ +
Sbjct: 150 AQVASYKGFIFATLNSEA---------PPLAEHLGNATRYLDAWIEHNGGAQNIVLAGAQ 200
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + CNWK+ DN D GYHVP++H+ L
Sbjct: 201 RFRVGCNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|119713493|gb|ABL97546.1| Rieske 2Fe-2S domain protein [uncultured marine bacterium
EB0_35D03]
Length = 392
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 155/372 (41%), Gaps = 38/372 (10%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E A P++ F E R+F + W +G TD+L + D+ + I ++ R +
Sbjct: 31 EDATPIPAAVNHSVEFYNHEQDRIFNQEWICIGRTDELPNTGDYLTHDIAGTPILIVRQE 90
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ +I F N C H + L + +G F CP H WTY LDGTL A + DF+++
Sbjct: 91 SSEIMGFVNACAHRFTCLVSKQTGNAFAFTCPNHAWTYALDGTLKHAPFMELKNDFDIES 150
Query: 147 FGLVPLEVATWGPFVLLNMGKE-----AVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
L L W F+ + + K+ A EE+ N+V G ++ +S
Sbjct: 151 HRLKTLSTEVWEGFIYITLAKDPSKKVAPSLEELRKNIV------GQYDM-------ASY 197
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ--LDSY-----STSLYEKVS 254
+ R + + NWK +N+ + YHVP AH+ + + ++ Y + +
Sbjct: 198 KTVIRESMSWDANWKNLIENFTE-SYHVPMAHQKTFANHKKAIEDYVCGEDNDHYCYHYA 256
Query: 255 IQRCESGSTEGTDDTHRLG---SKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVV 310
Q ESG + +L + + F I+PN +I ++ V+P R K
Sbjct: 257 PQEAESGPGAAHPNNIKLEGPWRRTMVDFCIFPNHLITLMPDYLWWVSVLPEGVNRFKAT 316
Query: 311 FDYFLDGSLKDD------KAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPS 364
+ + + + +++Q E ED +L +G+ RG S G P
Sbjct: 317 WGVAVPPEILKEIPEAEYDEWLQQMTNYMEAANNEDKLLVQGLNRGTGSRILPEGTLHP- 375
Query: 365 VEQTMYHFHSLL 376
+E+ ++ F L
Sbjct: 376 IEKNLWQFTKYL 387
>gi|295703656|ref|YP_003596731.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium DSM
319]
gi|294801315|gb|ADF38381.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium DSM 319]
Length = 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 152/361 (42%), Gaps = 36/361 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YT LE +F +SW +V + ++ +P + + R+ ++ R + + F NV
Sbjct: 23 YTSSDIFKLEKDHIFSKSWSLVAFEYEIAEPGQYITTRVEGENILITRGKDHVLRGFLNV 82
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV--KEFGLVPLEV 154
CRH A + + SGK CPYH W+Y LDG L+ + ++ V + +GL + V
Sbjct: 83 CRHRGAKLCSQASGKAGVIRCPYHSWSYSLDGDLVGVPNTSHCREELVHNENYGLTSVHV 142
Query: 155 ATWGPFVLLNMGKEAVHQE-EVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYTIE 212
W V +N+ + E ++D+ + E+ + + +L R EY +E
Sbjct: 143 EVWHGMVWVNLSDNPMSVEYQLDAQIFDR-----FGELYTFARYEIQNLKSAHREEYEVE 197
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRL 272
NWK+ +N+ + YH H L + L V Q G + ++
Sbjct: 198 ANWKLIVENFQE-CYHCSSIHPELTATL------PEFRSGVGTQSSVGGGAKFGNELEAF 250
Query: 273 -----GSKAIYAFIYPNFMINRYG----PWMDTNL---------VIPLAPTRCKVVFDYF 314
GS+ + + P +G P + NL +IP++ + KV+ ++
Sbjct: 251 SISGKGSRPMLKGLLPEDDRTYFGITVLPLVFINLTPDHVIIHRIIPISAEKSKVICEWL 310
Query: 315 LDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
D F + +++ +V ++D CE Q + S +Y G +EQ + HF+
Sbjct: 311 FDPEEMAKPDFDPKDAVELFHRVNLQDFEACEWCQENMSSKSYKEGGILVPIEQHVSHFY 370
Query: 374 S 374
+
Sbjct: 371 N 371
>gi|372270098|ref|ZP_09506146.1| large subunit of terminal oxygenase component of anthranilate
1,2-dioxygenase [Marinobacterium stanieri S30]
Length = 461
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 20/253 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P EK +TDP LE+ +F +W + Q+ + DFF+ + G ++ R
Sbjct: 23 PEEKTFKVAREVFTDPELFDLEMELIFENTWIYACHESQIANKHDFFTMQAGRQPMIITR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFN 143
D G+I+A N C+H A++ G +S F CP+H W Y DG L+K DF+
Sbjct: 83 DAKGEINALLNACQHRGATLTRVCKGNQSTFTCPFHAWCYKTDGKLVKVKAPDEYPADFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVH--QEEVDSNVVANEWLGGSSEILSINGIDSSL 201
GL V+++ FV +N+ E +E + +A + + S + + S
Sbjct: 143 KSTRGLRKALVSSYKGFVFINLNTECTQSLEEFLGDAKIAFDMMAAQSPTGELEVLPGSS 202
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESG 261
S YT + NWK+ +N LD GYHV H +Y ++ + ++G
Sbjct: 203 S------YTFDGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQQDAAKAG 246
Query: 262 STEGTDDTHRLGS 274
T D +LG+
Sbjct: 247 GASKTLDYSKLGA 259
>gi|333907779|ref|YP_004481365.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas posidonica
IVIA-Po-181]
gi|333477785|gb|AEF54446.1| Rieske (2Fe-2S) iron-sulfur domain protein [Marinomonas posidonica
IVIA-Po-181]
Length = 424
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP +++ +F + W VG T ++ D+F+ IG+ ++ RD GK++AFHN
Sbjct: 39 YNDPHMFRIDMEEIFQKEWLFVGMTSEIPKKGDYFTVEIGQNPVLIVRDAEGKVNAFHNT 98
Query: 98 CRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKA-TRITGIKDFNVKEFGLVPLEVA 155
CRH S++ + GK + VCPYH WTY L G LL A T ++ KDF +K+ GL
Sbjct: 99 CRHRGSVICSEHRGKVANLVCPYHQWTYDLKGNLLFAGTEMS--KDFELKQHGLKSAHCK 156
Query: 156 TWGPFVLLNMGKEA 169
T G F+ + + K A
Sbjct: 157 TAGGFIFVCLAKVA 170
>gi|399522683|ref|ZP_10763346.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399109547|emb|CCH39907.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 428
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
+ + + P +Y D +++ +F++ W + G T ++ +F + +IG+ +V R
Sbjct: 28 DHSFSLPQPFYNDERLFQVDMQEIFHKEWLIAGMTSEIPTKGNFLTLQIGDNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G+IHAFHNVCRH S L + GK + VCPYH WTY LDG LL A G + F + +
Sbjct: 88 EGQIHAFHNVCRHRGSRLCVSDKGKVAKLVCPYHQWTYELDGRLLFAGTEMG-EGFKLSD 146
Query: 147 FGLVPLEVATWGPFVLLNMG 166
+ L P+ T G F+ +++
Sbjct: 147 YNLKPVNCKTAGGFIFISLA 166
>gi|398997129|ref|ZP_10699960.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398124794|gb|EJM14295.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 431
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++ +
Sbjct: 88 DGVVHAFHNVCRHRGSRLCTSEKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLSE 167
>gi|71279410|ref|YP_270687.1| Rieske family iron-sulfur cluster-binding protein [Colwellia
psychrerythraea 34H]
gi|71145150|gb|AAZ25623.1| iron-sulfur cluster-binding protein, Rieske family [Colwellia
psychrerythraea 34H]
Length = 427
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PI +L P +Y+D +E+ ++FY+ W VG T ++ D +F + IG+ V R
Sbjct: 30 PITFSL--PQQFYSDADVFQVEMEQIFYKEWLFVGITGEIPDNGNFITLDIGDNPITVIR 87
Query: 86 DDNGKIHAFHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D NG++ AFHN CRH S I GK VCPYH WTY LDG LL A G DF+
Sbjct: 88 DQNGEVRAFHNTCRHRGSKICLVKQGKVPKLVCPYHQWTYELDGNLLFAGTEMG-DDFDK 146
Query: 145 KEFGLVPLEVATWGPFVLLNMGK 167
++GL + G ++ +++ +
Sbjct: 147 NDYGLHKVNCRVAGGYIFVSLSE 169
>gi|294010542|ref|YP_003544002.1| putative dioxygenase [Sphingobium japonicum UT26S]
gi|292673872|dbj|BAI95390.1| putative dioxygenase [Sphingobium japonicum UT26S]
Length = 421
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 164/389 (42%), Gaps = 64/389 (16%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG--RIGEVEFVVCRDDNGKIHAFH 95
Y P++ E +F R+W VG +QL + FF+ I VV R + +I AF+
Sbjct: 31 YRSPAYFERERENLFKRAWLTVGRVEQLPEKGSFFTKTIEIWNAPIVVTRGSDDRIQAFY 90
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
NVC H + ++ T G+ S F C YH W Y DG+L+ D + K+ GLVP+
Sbjct: 91 NVCAHRGNQVVLTERGRASRFSCNYHNWVYRNDGSLMGVPDEANFFDLDKKKCGLVPIAT 150
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI---LSINGIDSSLSYLCRREYTI 211
W ++ LN HQ++ + V E+LG +S D+SL + E +
Sbjct: 151 DVWEGWIFLN------HQKQPE--VSLQEFLGDFGTRFAGVSWENTDTSLYF----EAHL 198
Query: 212 ECNWKVFCDNYLDGGYHVPYAH-----KGLASGLQ-----LDS--------YST------ 247
+ NWKV D + + YH+P H K AS + LD+ +ST
Sbjct: 199 DANWKVLADAFSE-TYHIPSIHPATIGKTFASAVNPHSRPLDARFWGPHRQFSTFGNPDY 257
Query: 248 -----SLYEKVSIQRCESGSTEGTDD----THRLGSKAI-----------YAFIYPNFMI 287
++ EK++ ++G+ G + T L AI A +P I
Sbjct: 258 APPEDAMVEKMAYANRDTGNVLGAAETAGMTEYLDHPAINPKQSKHWALDIAVAFPTLHI 317
Query: 288 NRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLK-DDKAFIEQSLKDSEQVQMEDIILCEG 346
N ++ P++ R + ++ + L +K E + + +ED+ E
Sbjct: 318 NLSPGGFWSHRFWPISVNRTRWEAEFHVPKPLTGREKLQQELYITRIAGILLEDVTNTER 377
Query: 347 VQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
QRG+E+ AY + + Q ++ H +
Sbjct: 378 TQRGIEAGAYDTMQLQDGEVQIRHNLHHV 406
>gi|119504948|ref|ZP_01627025.1| Rieske 2Fe-2S family protein [marine gamma proteobacterium
HTCC2080]
gi|119459234|gb|EAW40332.1| Rieske 2Fe-2S family protein [marine gamma proteobacterium
HTCC2080]
Length = 399
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 145/347 (41%), Gaps = 43/347 (12%)
Query: 52 FYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK 111
F SWQ+VG+ L+ P DF + + +V + I AF NVCRH A L G G
Sbjct: 42 FLNSWQMVGHVCDLQQPGDFITLDMWRDSVIVVCGKDHVIRAFLNVCRHRAMRLLDGQGN 101
Query: 112 -KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAV 170
+ CPYHGWTY DG+L T+ D + GL + + + + +N+
Sbjct: 102 CGNAIQCPYHGWTYRNDGSLRGVTQAENFPDLDKSTLGLQEVRLKIYRGHIFVNL----- 156
Query: 171 HQEEVDSNVVANEWLGGSSEILSINGID--SSLSYLCRREYTIE---CNWKVFCDNYLDG 225
++ LG SE GID + +Y R+ T E CNWK+ DNY +
Sbjct: 157 ----CGGGASIDDTLGALSE-----GIDLYAPETYESHRQPTFEVWDCNWKLAWDNYQE- 206
Query: 226 GYHVPYAHKGL-------ASGLQLDSYSTSLY-------EKVSIQRCESGSTEGTDDTHR 271
YH+P H L G++ Y KV +R TD HR
Sbjct: 207 NYHIPIGHPCLHRMVESTEEGVEFSGGFNYGYFAMRDKLSKVPQERRYQELIACTD--HR 264
Query: 272 L----GSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIE 327
G K + + PN I Y + PLA + V + +L ++ ++
Sbjct: 265 FPEGKGRKWLQLALDPNMGIEYYPDLFALFQIFPLAVDKTLVKLATYSPPNLSAEERELQ 324
Query: 328 Q-SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
+L ++V +D +L E +QRG+ + Y G A E ++Y FH
Sbjct: 325 AINLALLDEVNDQDKMLVERIQRGVNTTGYQPGPLALE-ESSVYSFH 370
>gi|148260012|ref|YP_001234139.1| Rieske (2Fe-2S) domain-containing protein [Acidiphilium cryptum
JF-5]
gi|326403032|ref|YP_004283113.1| putative iron-sulfur protein [Acidiphilium multivorum AIU301]
gi|146401693|gb|ABQ30220.1| Rieske (2Fe-2S) domain protein [Acidiphilium cryptum JF-5]
gi|325049893|dbj|BAJ80231.1| putative iron-sulfur protein [Acidiphilium multivorum AIU301]
Length = 423
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP +L +F R W VG + +P D + +IG+ + ++CRDD+G IHA HN
Sbjct: 26 FYTDPDVFRADLEYIFNRHWIFVGVEPDVPEPGDVMTLKIGDNDILICRDDDGAIHAMHN 85
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
VCRH A+ +++T VCPYH WTYGLDG L+ A + +DF+ GL + +
Sbjct: 86 VCRHRAARLVSTEKATVGRLVCPYHAWTYGLDGALVHAEHMG--EDFDHSCHGLKKIHLR 143
Query: 156 TWGPFVLLNMGKE 168
+ + + + +E
Sbjct: 144 SLEGLLFVCLAEE 156
>gi|338983520|ref|ZP_08632706.1| Rieske (2Fe-2S) domain-containing protein [Acidiphilium sp. PM]
gi|338207560|gb|EGO95511.1| Rieske (2Fe-2S) domain-containing protein [Acidiphilium sp. PM]
Length = 426
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP +L +F R W VG + +P D + +IG+ + ++CRDD+G IHA HN
Sbjct: 29 FYTDPDVFRADLEYIFNRHWIFVGVEPDVPEPGDVMTLKIGDNDILICRDDDGAIHAMHN 88
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
VCRH A+ +++T VCPYH WTYGLDG L+ A + +DF+ GL + +
Sbjct: 89 VCRHRAARLVSTEKATVGRLVCPYHAWTYGLDGALVHAEHMG--EDFDHSCHGLKKIHLR 146
Query: 156 TWGPFVLLNMGKE 168
+ + + + +E
Sbjct: 147 SLEGLLFVCLAEE 159
>gi|254294902|ref|YP_003060925.1| Rieske (2Fe-2S) domain-containing protein [Hirschia baltica ATCC
49814]
gi|254043433|gb|ACT60228.1| Rieske (2Fe-2S) domain protein [Hirschia baltica ATCC 49814]
Length = 403
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 148/353 (41%), Gaps = 34/353 (9%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P YTDP F E +F + W VG + + D+F+ +I + VV R +G +
Sbjct: 24 TLPPECYTDPDFYEFEKESLFSKEWLCVGRESWVGEAGDYFTTQIADEPIVVARARDGNL 83
Query: 92 HAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
+A +VC+H A ++A G G FVCPYH WTY L G L+ A + +F+ KE L
Sbjct: 84 YAMSSVCQHRAMLVAEGHGNTRGFVCPYHHWTYSLKGDLVGAPAMNKTCNFDKKEHSLPK 143
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+V W F+ ++ ++++ +A L + ++ ++++ +
Sbjct: 144 FKVEVWLGFIFVHF--------DINAEPLAPR-LEQVTNAIAGYDLENAEGPRPGDAPHL 194
Query: 212 ECNWKVFCDNYLDGGYHV-------------------PYAHKGLASGLQLDSYSTSLYEK 252
+ NWKV +N D GYH P A KG A L+ + + +
Sbjct: 195 QWNWKVMFENNND-GYHASRLHQGPLHDFVPSEQASFPKAPKGAAGYLRFNGTTHADASF 253
Query: 253 VSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
Q+ G ++ R ++ +A I P + + ++ P ++
Sbjct: 254 NPTQKAVLPVFAGLNEEQR--NRMTFANIPPTLSLVLTADMVIYMILRPTGAGSLEMDTG 311
Query: 313 YFLDGSLKDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
+ +D AF +E + + + +D + E VQ GL S GRY+
Sbjct: 312 VLVAPGAMEDAAFEPKMEMIMNSTHHIIAQDWHVDELVQIGLRSRFAKRGRYS 364
>gi|223934502|ref|ZP_03626423.1| Rieske (2Fe-2S) domain protein [bacterium Ellin514]
gi|223896965|gb|EEF63405.1| Rieske (2Fe-2S) domain protein [bacterium Ellin514]
Length = 458
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 148/400 (37%), Gaps = 54/400 (13%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P+++A T P+ YT F E+ V WQ + + Q+ P DF + + +V
Sbjct: 45 LPLDRATTIPAQAYTSEEFFEWEVEHVLRAGWQSLAHISQIPAPGDFLNVDLLGEPLIVV 104
Query: 85 RDDNGKIHAFHNVCRHHASILATGS--------------------GKKSWFVCPYHGWTY 124
+G I VC H + + G F+CPYH WT+
Sbjct: 105 HAKDGSIRVLSRVCPHRSMDIMPADFGYPGHSHNSDESSDGNPKCGNTRLFLCPYHSWTF 164
Query: 125 GLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEW 184
LDG L + DF E+ L W FV +N+ A S + +
Sbjct: 165 ELDGRLKACPEMHEASDFCRDEYSLKTFRCEIWQGFVFVNLDGSATPLTAELSEMATD-- 222
Query: 185 LGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
E + S L + RE+ NWKV +N+++ +H+ HK L +
Sbjct: 223 ----LEAFRL----SELKVVIAREWACPFNWKVLAENFMESYHHLGIHHKTLQPLMPARD 274
Query: 245 YSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYA--------------------FIYPN 284
T + ++ +D KA ++ ++P
Sbjct: 275 TWTEQERRRYVRAHLPYKDTVREDFRAFEKKADFSEALPPLPLLNPEQKSEWGLFLVHPT 334
Query: 285 FMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQV---QMEDI 341
F++ + ++PL P R ++ + K F + +EQ+ +ED+
Sbjct: 335 FLLATAPDRVIWYRLLPLGPNRLDLMTTTLVAPDTTRLKNFEKLRSLATEQLTAFHVEDM 394
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
+C VQRGL + + GR + +E ++ FH L ++
Sbjct: 395 EVCTAVQRGLYASGWQPGRLS-HLEMPVWLFHRYLAARIS 433
>gi|254509979|ref|ZP_05122046.1| rieske (2Fe-2S) protein [Rhodobacteraceae bacterium KLH11]
gi|221533690|gb|EEE36678.1| rieske (2Fe-2S) protein [Rhodobacteraceae bacterium KLH11]
Length = 363
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 143/356 (40%), Gaps = 29/356 (8%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y F E V ++W +G+ Q+ DP D ++ + R +G I FHNV
Sbjct: 23 YRSEEFWQRECQTVLSKNWVFIGFAHQMADPGDTHPVTCADLPLLAVRGRDGAIQVFHNV 82
Query: 98 CRHHASILATGSGKKSWFV-CPYHGWTYGLDGTLLKATRITG-----IKDFNVKEFGLVP 151
C H L + CPYH W Y LDG L A G + F++K L P
Sbjct: 83 CLHRCMTLVDKPKNVGKLIRCPYHAWAYDLDGHLRAAPHFAGTGKQEFEGFDIKNHRLKP 142
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ W ++ +N+ A E+ + +++ + + I +D I
Sbjct: 143 VRTHVWHDWIFVNLDGNAPDFEDYAAPLISRLEGMDFTRVEPIGLLDFG---------EI 193
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYS----TSLYEKVSIQRCESGSTEGTD 267
+ NWK+ +N+++ YHV + H + Y+ T + V + E T G+
Sbjct: 194 DTNWKLIMENFIE-PYHVQFVHASTTDQPLENHYTIIDGTCIGSAVDLN--EELGTSGS- 249
Query: 268 DTHRLGSKAIYAFIYPNFMINRYGP-WMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFI 326
LG + Y +YPNF++ RY P + L +P+ P R + + +
Sbjct: 250 ----LGVSSRYLTLYPNFILGRYFPDQLGVYLNVPIGPGRMRQYRALYTTEGQNLSAEEV 305
Query: 327 EQSLKDSEQVQMEDIILCEGVQRGLESP-AYCSGRYAPSVEQTMYHFHSLLHCNLT 381
+ V ED + E + G +SP A G +P+ E ++ F L+ ++
Sbjct: 306 QALRALWWDVHKEDHEMVERMFEGRKSPVAQEGGLLSPAWEDSVRAFQDLIERDVA 361
>gi|146328189|emb|CAM58106.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large [uncultured marine microorganism]
Length = 402
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 117/259 (45%), Gaps = 42/259 (16%)
Query: 9 ENLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDP 68
E+L+A+QK + +YTDP LEL R+ R+W + G+ Q+ D
Sbjct: 8 EDLIASQKPGWAL------------AQRFYTDPEIYRLELERIVTRNWILAGHASQVPDV 55
Query: 69 QDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILAT---GSGKKSWFVCPYHGWTYG 125
D+ R+ ++ R +GKI AF NVCRH S++ G+ KK FVCPYHGWTY
Sbjct: 56 GDYLVFRLANESAIIVRGKDGKIRAFANVCRHRGSLVCLDDHGNNKK--FVCPYHGWTYD 113
Query: 126 LDGTLLKATRITGIKDFNVKEFGL--VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANE 183
L+G L+ A +T + F +E L VPLEV FV +
Sbjct: 114 LEGNLVAARAMT--EGFAKEEHNLHSVPLEVIGGLLFVCFCDTPPS-------------- 157
Query: 184 WLGGSSEILS--INGID-SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS-- 238
L G+ L+ I D +L ++ Y I NWK+ +NY + YH AH A
Sbjct: 158 -LAGAQRDLAEPIAWFDFENLKVAAQKTYPIAANWKLAIENYQE-CYHCAAAHPDYAKMH 215
Query: 239 GLQLDSYSTSLYEKVSIQR 257
L LD ++ + R
Sbjct: 216 TLMLDPKKRDRLQEPMLHR 234
>gi|398953981|ref|ZP_10675725.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM33]
gi|398153283|gb|EJM41788.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM33]
Length = 431
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDERLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++ +
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|389865348|ref|YP_006367589.1| dioxygenase with Rieske [2Fe-2S] iron-sulfur domain [Modestobacter
marinus]
gi|388487552|emb|CCH89112.1| Putative dioxygenase with Rieske [2Fe-2S] iron-sulphur domain
[Modestobacter marinus]
Length = 404
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 37/223 (16%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
++P+ +A+ P+ Y DP LEL R+F W + +Q+ D+ + + +V
Sbjct: 21 ELPLPEAIPLPAQAYWDPGLYELELERIFRGDWVCIARVEQVPAAGDYLAVDLAAEPMMV 80
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKS--------WFVCPYHGWTYGLDGTLLKATR 135
R ++ +I F VCRH L G + S WF CPYH WTY LDG+L+ A
Sbjct: 81 VRGEDEEIRVFSRVCRHRYVDLLGGKTEDSQKERGCAEWFECPYHSWTYRLDGSLMNAPE 140
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ F+ +GL P+ W F+ +N L G +E L ++
Sbjct: 141 MLDRPGFDQAAYGLRPIHQQIWQGFIFVN--------------------LDGLAEPLEMS 180
Query: 196 GIDSSLSYLCRREYTI---------ECNWKVFCDNYLDGGYHV 229
G++ L + I + NWK+ +NY + +H+
Sbjct: 181 GLERVLDKYDLANWRIATVVDWGETKVNWKIMVENYAECYHHI 223
>gi|359789023|ref|ZP_09291985.1| dioxygenase alpha subunit [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255161|gb|EHK58098.1| dioxygenase alpha subunit [Mesorhizobium alhagi CCNWXJ12-2]
Length = 399
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 28 EKALTPPSSW---------YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGE 78
+ L P++W Y + + L LE +F WQ+VG+ + + D+ + +
Sbjct: 5 RRDLAIPNNWDRRGLPGWSYHNAALLDLEKEHLFRNHWQIVGHVGDVPNAGDYLTMDVVG 64
Query: 79 VEFVVCRDDNGKIHAFHNVCRHHAS-ILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRI 136
+V R +G + AFHN+CRH S ++A G K+ VCP+HGW Y LDGTL A R
Sbjct: 65 ERALVVRGKDGVVRAFHNICRHRGSRVVAENQGSCKNALVCPFHGWVYNLDGTLRGAARP 124
Query: 137 TGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSING 196
D + EFGLVPL++ W MG V VA +EI
Sbjct: 125 KSFPDLDKTEFGLVPLDLEIW-------MGLIFVRFRSGPQPPVAELMKPVEAEIAHYRI 177
Query: 197 IDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ + S+ + T NWK D + GYHV AH L
Sbjct: 178 AEMTPSFGIWSQKT-PVNWKSVRD-VDNEGYHVAMAHPAL 215
>gi|402823508|ref|ZP_10872930.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas sp. LH128]
gi|402262941|gb|EJU12882.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas sp. LH128]
Length = 426
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+S Y DP+ EL R+F +W V + + F + +G+ +V RD IH
Sbjct: 25 TSLYKDPAIFDQELDRIFRNTWVWVAHESDVPKANTFKTSWVGDQPVIVTRDKTDTIHVL 84
Query: 95 HNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPL 152
N CRH A S+ GK S FVCPYHGW+YG+DG L K +G + K E LV L
Sbjct: 85 LNRCRHRAASVCEKKKGKSSVFVCPYHGWSYGVDGALRKVPHASGYQSEPEKAELSLVSL 144
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREY 209
V T+ + A +++++ E+LG + + + + G + L ++
Sbjct: 145 RVETYNGMIF------ATFKDDIEP---LAEFLGPAKKWIDLFMKQGAGFGVKTLGEHKF 195
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE 251
NWK+ +N D YH P HK LD+ + ++++
Sbjct: 196 RFPGNWKIQLENTTD-AYHFPIVHKTFLD--SLDAETENIFD 234
>gi|426411915|ref|YP_007032014.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. UW4]
gi|426270132|gb|AFY22209.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. UW4]
Length = 431
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ + P +Y+D +++ +F + W + G T ++ ++ + ++G+ +V R
Sbjct: 28 ERTFSLPQPFYSDDRLFDIDMQEIFQKEWLIAGMTCEIPTKGNYLTLQVGKNPIIVIRGA 87
Query: 88 NGKIHAFHNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
G +HAFHNVCRH S L T GK + VC YH WTY LDG LL A G DF++ +
Sbjct: 88 EGVVHAFHNVCRHRGSRLCTSDKGKVAKLVCHYHQWTYELDGRLLFAGTEMG-ADFDMNQ 146
Query: 147 FGLVPLEVATWGPFVLLNMGK 167
+GL P+ V T G ++ +++ +
Sbjct: 147 YGLKPVNVKTAGGYIFISLAE 167
>gi|16262853|ref|NP_435646.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti 1021]
gi|374977860|pdb|3VCA|A Chain A, Quaternary Ammonium Oxidative Demethylation: X-Ray
Crystallographic, Resonance Raman And Uv-Visible
Spectroscopic Analysis Of A Rieske- Type Demethylase
gi|374977861|pdb|3VCP|A Chain A, The 2.2 Angstrom Structure Of Stc2 With Proline Bound In
The Active Site
gi|14523491|gb|AAK65058.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti 1021]
Length = 412
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 160/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YT P AL+L +FY+ W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYTSPEVYALDLQHIFYKQWLYAVPVCQLAKAGSYTTLRVGAYEVVIVRSRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGSTE 264
NWK+ +N + YH H L LD + + RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQAHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|389874463|ref|YP_006373819.1| Rieske (2Fe-2S) domain-containing protein [Tistrella mobilis
KA081020-065]
gi|388531643|gb|AFK56837.1| Rieske (2Fe-2S) domain-containing protein [Tistrella mobilis
KA081020-065]
Length = 393
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 151/369 (40%), Gaps = 43/369 (11%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P S Y DP E+ +F R+ +V + +L P D+ + + V ++ R +G ++A
Sbjct: 32 PVSRYIDPERYKREVEIIFRRNPIIVAHGSELPKPGDYKTMDVTGVPILLVRTQDGSVNA 91
Query: 94 FHNVCRHHASILA---TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
F N CRH + L GS K+S FVCPYH WTYG DG L+ G + +E GL
Sbjct: 92 FVNACRHRGTKLVWEECGSHKRS-FVCPYHAWTYGTDGKLVGVPAAEGFPNMKREEMGLR 150
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L A FV + + A V + WLG + L G + Y+ R
Sbjct: 151 RLHCAERYGFVFVQVDPTA-------PKVDVDAWLGPMAHELEHIG---TADYVVWRPAQ 200
Query: 211 IE--CNWKVFCDNYLDGGYHVPYAH---------KGLASGLQLDSYSTSLYEKVSIQRCE 259
+E NWK+ D +L+ YH H A+ +L ++ + K SI
Sbjct: 201 LEKKTNWKLALDTFLE-NYHTRRTHTKTIWPVFLDNTAAFDRLSPHARVVLPKRSIPEIR 259
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCK-----VVFDYF 314
E + R S +Y I+PN M+ V P CK +V +
Sbjct: 260 DQDRETWN--LRDHSTVLYT-IFPNLMLAVLPDHCAIFQVWPDGIDNCKLPAYTLVPPKY 316
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPA---YCSGRYAPSVEQTMYH 371
L+ + D +S+ +V ED E +Q L S A + GRY EQ +
Sbjct: 317 LESATAQD--IWSKSMHVVFEVTEEDSDRSEAIQAALNSGANDHFVFGRY----EQALAW 370
Query: 372 FHSLLHCNL 380
FH + L
Sbjct: 371 FHQEVEAML 379
>gi|319653865|ref|ZP_08007959.1| Rieske domain-containing protein [Bacillus sp. 2_A_57_CT2]
gi|317394401|gb|EFV75145.1| Rieske domain-containing protein [Bacillus sp. 2_A_57_CT2]
Length = 280
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 130/295 (44%), Gaps = 46/295 (15%)
Query: 101 HASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPF 160
S+ +G K C YHGWT+ LDG L KA G + VK+ L + +
Sbjct: 7 QQSLKKNAAGNKKILQCAYHGWTFKLDGQLNKAPNFRGEDEACVKDACLRSVRMEILESL 66
Query: 161 VLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWKVFCD 220
+ +N+ D+ +E G E LS N S L ++ T + NWK F D
Sbjct: 67 IFVNLD---------DNAKPLSESYGDFFERLSKNSFLSELKRTGQKTRTFKANWKAFMD 117
Query: 221 NYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGT-------------D 267
NYL+ H AH + L ++ Y I CE+ S +GT +
Sbjct: 118 NYLECD-HCHVAHPSFVAALDMNDY--------QIITCENYSMQGTIVKPDKKYGTVDLN 168
Query: 268 DTHRLGSKAIYAFIYPNFMINRY-GPW-MDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF 325
D G + + +++PN M+ Y GP M T +IP+ V+ Y+ +D+
Sbjct: 169 DAEMQGGQ--FYWLWPNLMLTIYPGPGNMATIQIIPIDHETSMAVYTYY----FRDEN-- 220
Query: 326 IEQSLKD----SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
+ Q+ KD +EQV+ EDI L E Q G S A+ GRY+ S E+ + FH ++
Sbjct: 221 LSQAEKDLMTFAEQVRSEDIELVELEQIGFRSRAFSKGRYSSS-EKAIVQFHEMV 274
>gi|184185961|dbj|BAG30835.1| anthranilate 1,2-dioxygenase large subunit [Neptuniibacter sp.
CAR-SF]
Length = 463
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 110/255 (43%), Gaps = 24/255 (9%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P EK +TD LE+ +F +W + Q+ +P DFF+ + G ++ R
Sbjct: 23 PDEKVYKVAREVFTDRELFDLEMELIFENTWIFACHESQIANPNDFFTMQAGRQPMIITR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFN 143
D G+I+A N C+H A++ G +S F CP+H W Y DG L+K +DF+
Sbjct: 83 DARGEINALLNACQHRGATLTRVCKGNQSTFTCPFHAWCYKTDGKLVKVKAPDEYPQDFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
GL V+++ FV +N+ E E +LG + + SS
Sbjct: 143 KSARGLRKALVSSYKGFVFINLNTECKQSLEA--------FLGDARIAFDMMAAQSSTGE 194
Query: 204 L----CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE 259
L YT + NWK+ +N LD GYHV H +Y ++ ++ +
Sbjct: 195 LEVLPGASSYTFDGNWKLQNENGLD-GYHVSTVHY---------NYVATVQQRQQQNAAK 244
Query: 260 SGSTEGTDDTHRLGS 274
G T D +LG+
Sbjct: 245 EGGASKTLDYSKLGA 259
>gi|78059880|ref|YP_366455.1| dioxygenase [Burkholderia sp. 383]
gi|77964430|gb|ABB05811.1| putative dioxygenase [Burkholderia sp. 383]
Length = 414
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIG--EVEFVVCRDDNGKI 91
P+S YTD + +E R+F R+W +VG +++ P DFF ++ +V R ++G I
Sbjct: 23 PTSIYTDAAQYEVERERIFRRAWLMVGRVERIPKPGDFFVKQLAVLNASVIVARSEDGTI 82
Query: 92 HAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
AFHNVC H A+I+ A+G+ K+ FVC YH W Y G L +G + K+ G
Sbjct: 83 RAFHNVCAHRANIVEHRASGNAKR--FVCRYHSWGYDNAGQLAHVPDESGFFGLDKKKCG 140
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS-INGIDSSLSYLCRR 207
L P+ + W ++ +N+ E + E+LG ++ L+ I + + R
Sbjct: 141 LTPVALEIWEGWIFINLATE--------PELSLAEFLGPIADALTGIEYQNPDHPIVLRG 192
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAH 233
E+ NWK +N+ + YHV H
Sbjct: 193 EFN--ANWKAVAENFSE-AYHVASIH 215
>gi|254481169|ref|ZP_05094414.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
gi|214038332|gb|EEB78994.1| Rieske (2Fe-2S) domain protein [marine gamma proteobacterium
HTCC2148]
Length = 390
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 143/358 (39%), Gaps = 45/358 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+ Y + +L ++YR W T+++ + + +IG+ E +V RD++GK+ A
Sbjct: 21 PAECYLTETAFQRDLDTIWYRQWVYACRTEEVSETGSYQVQKIGDQEIIVLRDEHGKLQA 80
Query: 94 FHNVCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLV 150
FHN CRH S+L T G + CPYH W+Y L G L + KDF+ L
Sbjct: 81 FHNTCRHRGSVLLTETCGQLRGKSITCPYHAWSYSLQGDLKRTPSKFLQKDFDPTSKSLF 140
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
+ V W FV +N+ + + A E + + N L R
Sbjct: 141 SVAVQEWRGFVFINLDSD---------HAPAIETVMDGKGLAHKNWPAEDLRVGHRFSKQ 191
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
I CNWK+F +N+ + H P H L+ + L Y SL E ++ S D +
Sbjct: 192 INCNWKIFWENFSE-CLHCPGVHPELSRLVPL--YKRSLMETRDDPNWKTNSV-SQDPRY 247
Query: 271 RLG-----------SKAI-----------------YAFIYPNFMINRYGPWMDTNLVIPL 302
+ G KA+ Y ++P + + M ++PL
Sbjct: 248 KAGLAPDVESWTTDGKAVDTPFSALTEADIERGHTYETLWPTMFLVGHVDHMRIVWLLPL 307
Query: 303 APTRCKVVFDY-FLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSG 359
P +V ++ F +L D + + V +D + E QRGL S + G
Sbjct: 308 GPETTQVHAEWLFRPETLATDDFNAAEVAAFATTVLEQDGMASEMNQRGLRSIRFQEG 365
>gi|294498307|ref|YP_003562007.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium QM
B1551]
gi|294348244|gb|ADE68573.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium QM B1551]
Length = 382
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 40/363 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YT LE +F +SW +V + ++ +P + + R+ ++ R + + F NV
Sbjct: 23 YTSSDIFKLEKDHIFSKSWSLVAFEYEIAEPGQYITTRVEGENILITRGKDHVLRGFLNV 82
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV--KEFGLVPLEV 154
CRH A + + SGK CPYH W+Y LDG L+ + ++ V + +GL + +
Sbjct: 83 CRHRGAKLCSQASGKAGVIRCPYHSWSYSLDGDLVGVPNTSHCREELVHNENYGLTSVHI 142
Query: 155 ATWGPFVLLNMGKEAVHQE-EVDSNVVANEWLGGSSEILSINGID-SSLSYLCRREYTIE 212
W V +N+ + E ++D+ + E+ + + +L R EY +E
Sbjct: 143 EVWHGMVWVNLSDNPMSVEYQLDAQIFDR-----FGELYTFARYEIQNLKSAHREEYEVE 197
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI-------QRCESGSTEG 265
NWK+ +N+ + YH H L + L + + + + S+ E+ S G
Sbjct: 198 ANWKLIVENFQE-CYHCSSIHPELTA--TLPEFRSGIGTQSSVGGGAKFGNELEAFSISG 254
Query: 266 TDDTHRLGSKAIYAFIYPNFMINRYG----PWMDTNL---------VIPLAPTRCKVVFD 312
GS+ + + P +G P + NL +IP++ + KV+ +
Sbjct: 255 K------GSRPMLKGLLPEDDRTYFGITVLPLVFINLTPDHVIIHRIIPISAEKSKVICE 308
Query: 313 YFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYH 371
+ D F + +++ +V ++D CE Q + S +Y G +EQ + H
Sbjct: 309 WLFDPEEMAKPDFDPKDAVELFHRVNLQDFEACEWCQENMSSKSYKEGGILVPIEQHVSH 368
Query: 372 FHS 374
F++
Sbjct: 369 FYN 371
>gi|238495728|ref|XP_002379100.1| iron-sulfur domain containing protein, putative [Aspergillus flavus
NRRL3357]
gi|220695750|gb|EED52093.1| iron-sulfur domain containing protein, putative [Aspergillus flavus
NRRL3357]
Length = 267
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY + LE +F + W ++ ++ + + DF S + F + RD +G I+
Sbjct: 21 PASWYRSEAMYQLERRAIFSKRWMLLTHSSRFTEQGDFLSFTVANFSFFLIRDRDGNING 80
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH A ++ T SG S C YHGW+YGL G L KA R + F+ + GL+P+
Sbjct: 81 FHNVCRHRAFPVVQTRSGSTSILSCKYHGWSYGLKGNLAKAPRFETVPGFDKSQHGLLPV 140
Query: 153 EVAT-WGPFVLLNM--GKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR-- 207
V F+ +N+ G V E+ + E + D + Y
Sbjct: 141 HVHIDKAGFIWVNLQAGSPDVRWEDDFQRI---------DEQPRMQDFDFAGEYTFDHYW 191
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSY 245
E ++ NWK +NY + YH +H ++ L Y
Sbjct: 192 EMDLDANWKGVIENY-NECYHCATSHPLISGVSDLPRY 228
>gi|395492754|ref|ZP_10424333.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas sp. PAMC
26617]
Length = 383
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 159/379 (41%), Gaps = 54/379 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y +L +F SW + G+T ++K P D+ S +G +V R +G + A
Sbjct: 2 PQDLYLSAEAFDFDLAAIFGTSWLLAGFTAEVKQPGDYLSFMVGRWPVIVVRGRDGALRA 61
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH SIL G+G CPYH W+YGLDG LL A R+ DF+ ++GL P+
Sbjct: 62 FHNSCRHRGSILCKPGAGHAPRLTCPYHRWSYGLDGRLLAAGRMP--DDFDKTDYGLKPV 119
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
+ T + +++ Q D +++ + + +L + ++ + + + +E
Sbjct: 120 HLETIAGAIFVSLA-----QVPPDISILWRD----LTPLLEPHNLER--AKVAHKSVLVE 168
Query: 213 -CNWKVFCDNYLDGGYHVPYAHKGLASG--------LQLDSYSTSLY-EKVSIQRCESG- 261
NWK+ +N + YH H LA L++ + L+ E+++ +G
Sbjct: 169 YANWKLVVENGRE-CYHCASGHPELARTFPVGATKYFDLEAAAARLFTERMNAIGLPTGP 227
Query: 262 --------------------STEGTDDTHRLGSKA-------IYAFIYPNFMINRYGPWM 294
+T G +L +A + + PN + +
Sbjct: 228 VGEDWWQAVRFALNDGNVAMTTSGQFAVKKLMVEAGGGDAGSLRWAVEPNNFCHSTSDYT 287
Query: 295 DTNLVIPLAPTRCKVVFDYFL-DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLES 353
+P++P VV + + + +++ I++ Q ++D E Q G+ S
Sbjct: 288 FAFNAMPVSPGETHVVSTWLVHEDAIEGVDYDIDELTHLWTQTNLQDKAFAEDNQVGVWS 347
Query: 354 PAYCSGRYAPSVEQTMYHF 372
P Y G Y+P+ E F
Sbjct: 348 PGYTPGPYSPTAESLTLRF 366
>gi|302545903|ref|ZP_07298245.1| Rieske family iron-sulfur cluster-binding protein [Streptomyces
hygroscopicus ATCC 53653]
gi|302463521|gb|EFL26614.1| Rieske family iron-sulfur cluster-binding protein [Streptomyces
himastatinicus ATCC 53653]
Length = 423
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 155/386 (40%), Gaps = 68/386 (17%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTD F AL+L +F R W V ++ P D+ + IG +V RDD G AFHN
Sbjct: 27 FYTDREFYALDLAAIFTRQWLFVAVDAEIPWPGDYTTVDIGPYPVIVLRDDEGNPRAFHN 86
Query: 97 VCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
VCRH A +L SG VC YH WTYG DG L A G DF+ FGL + V
Sbjct: 87 VCRHRGARLLEDRSGSVGNLVCGYHKWTYGTDGALRYAPSQPG--DFDRGCFGLKAVHVR 144
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
+ G + + + + D VA E + R + + NW
Sbjct: 145 SVGGLLFVCLADDP----PADFGEVA-----ARIEPYLLPHRLRGAKVAARTDLVEDGNW 195
Query: 216 KVFCDN-----YLDGGYHV--------PYAHKGLASG--------LQLDSYSTSLYEKVS 254
K+ +N + DG + YA + + + L+ D+ + YE++
Sbjct: 196 KLVMENNRECYHCDGHPELLRTFFPTYGYAEEDIPAPLRPAHERYLRTDAELRATYERLG 255
Query: 255 -----------------IQR------CESGSTEGTD---------DTHRLGSKAIYAFIY 282
IQR ES + +GT T RLG A++ ++
Sbjct: 256 LPYALIEELDGRTTGFRIQRDALDLAGESFTPDGTAACRRLLGDLPTPRLGHLALH--LH 313
Query: 283 PNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQS-LKDSEQVQMEDI 341
PN + G T +PLAP R + + + ++ + + LK +D
Sbjct: 314 PNSWFHVLGDHAITFSALPLAPDRTLLRTTWLVHPDAEEGVDYDRDTLLKVWTATNEQDA 373
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQ 367
L QRG+ SPAY G YAP+ Q
Sbjct: 374 RLVARAQRGVSSPAYVPGPYAPTEYQ 399
>gi|107100538|ref|ZP_01364456.1| hypothetical protein PaerPA_01001563 [Pseudomonas aeruginosa PACS2]
Length = 376
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 161/377 (42%), Gaps = 78/377 (20%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF
Sbjct: 8 AAHYTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAF 66
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVP 151
N C H S + T + VCPYH W++G +G L+ + + F+ +E GL
Sbjct: 67 LNQCPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSAEERARIGLRK 125
Query: 152 LEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L + G + +N+ + + +E+ D +L E+ S +D+ L Y C +
Sbjct: 126 LHLEEVGQLLFVNLADDPLPLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HK 175
Query: 211 IECNWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS-------------- 244
+ NWK+ +N D HVP+ H +GLA + S
Sbjct: 176 VRYNWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQESETPEL 234
Query: 245 YSTSLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRY 290
S S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 235 RSLSFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQY 289
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEG 346
P+AP + + KD K A + ++ V ED ++ E
Sbjct: 290 D---------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLER 339
Query: 347 VQRGL--ESPAYCSGRY 361
+Q GL SP + G Y
Sbjct: 340 LQEGLGAHSPPFMHGDY 356
>gi|355647793|ref|ZP_09055265.1| hypothetical protein HMPREF1030_04351 [Pseudomonas sp. 2_1_26]
gi|354827683|gb|EHF11826.1| hypothetical protein HMPREF1030_04351 [Pseudomonas sp. 2_1_26]
Length = 376
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 161/377 (42%), Gaps = 78/377 (20%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF
Sbjct: 8 AAHYTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAF 66
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVP 151
N C H S + T + VCPYH W++G +G L+ + + F+ +E GL
Sbjct: 67 LNQCPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSAEERARIGLRK 125
Query: 152 LEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L + G + +N+ + + +E+ D +L E+ S +D+ L Y C +
Sbjct: 126 LHLEEVGQLLFVNLADDPLSLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HK 175
Query: 211 IECNWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS-------------- 244
+ NWK+ +N D HVP+ H +GLA + S
Sbjct: 176 VRYNWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQEGETPEL 234
Query: 245 YSTSLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRY 290
S S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 235 RSLSFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQY 289
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEG 346
P+AP + + KD K A + ++ V ED ++ E
Sbjct: 290 D---------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLER 339
Query: 347 VQRGL--ESPAYCSGRY 361
+Q GL SP + G Y
Sbjct: 340 LQEGLGAHSPPFMHGDY 356
>gi|187924139|ref|YP_001895781.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187715333|gb|ACD16557.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 427
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL R+FY++W V + +L +P DF + IG +V RD +G ++
Sbjct: 26 SLYYDPAVFEAELERIFYKTWIWVAHESELPNPGDFRTTTIGRQPVIVVRDKSGAVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G F CPYH WTYGLDGTL G + K E L L
Sbjct: 86 NRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGTLRALPYGDGYEGVVDKTELPLASLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + +E E ++LGG+ ++ G + +
Sbjct: 146 VGIYQGLIFASFNQEIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHRFR 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 197 FNGNWKIQLENTTD-LYHFPVVHK 219
>gi|346993031|ref|ZP_08861103.1| Rieske (2Fe-2S) domain-containing protein [Ruegeria sp. TW15]
Length = 395
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 151/374 (40%), Gaps = 62/374 (16%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y + +E ++F R W G T +P DF + + G +V + +G++
Sbjct: 16 PREAYVSEDWFQVEQSQIFSRCWTFAGVTMDFPEPGDFRTIKAGANSVIVIKGADGELRG 75
Query: 94 FHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTL--LKATRITGIKDFNVKEFGLV 150
FHN+CRH + L G G VCPYH W Y LDG L + A R D + K L
Sbjct: 76 FHNLCRHRGTELLEGCGNAGKTIVCPYHNWVYNLDGALRGVPAQREC-FPDLDKKSNALF 134
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS--LSYLCRRE 208
V + V +N D + + WL G ++ + + S+
Sbjct: 135 GAAVGVFRNLVFVN----------PDPDADFDNWLSGLDQVPWPHDLTSTELQENPDNVV 184
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
Y IECNWKVF +N +D GYH+ Y HK G ++ +L+E V Q STE
Sbjct: 185 YEIECNWKVFFENAID-GYHLAYLHKDTLGG---PTHDKNLWE-VFGQNMIWWSTEREGV 239
Query: 269 THRL-----------GSKAI-------YAFIYPNF--MINRYGPW-MDTNLVIPLAPTRC 307
HR+ G K + Y +Y F I PW + + P++ R
Sbjct: 240 KHRIPQFVENSAKGSGLKTVKNAETPGYGGVYMLFPTTILTPNPWGFSISTMEPISANRM 299
Query: 308 KV-------------------VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQ 348
++ + Y + L + + L+ + Q ED+ +CE +Q
Sbjct: 300 RLRVRNWSPKGWFTYTHRAADIPGYDAETGLIKSSHWTKHPLETGD-FQTEDVWVCEKMQ 358
Query: 349 RGLESPAYCSGRYA 362
+ ++SP + G A
Sbjct: 359 KSMQSPRFEVGALA 372
>gi|91783709|ref|YP_558915.1| (poly)aromatic ring hydroxylating dioxygenase, alpha subunit
(Rieske (2Fe-2S) region) [Burkholderia xenovorans LB400]
gi|91687663|gb|ABE30863.1| Putative (poly)aromatic ring hydroxylating dioxygenase, alpha
subunit (Rieske (2Fe-2S) region) [Burkholderia
xenovorans LB400]
Length = 427
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL R+FY++W V + +L DP DF + IG +V RD G ++
Sbjct: 26 SLYYDPAVFEAELERIFYKTWVWVAHESELPDPGDFRTTTIGRQPVIVVRDKTGAVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLE 153
N CRH A++ G F CPYH WTYGLDG L G + + E L L
Sbjct: 86 NRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGALRALPYGDGYEGVIDKTELPLASLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + +E E ++LGG+ ++ G + +
Sbjct: 146 VGIYQGLIFASFNQEIEPLE---------DFLGGAKPWIDLFMKQGAGYPVKTNGEHRFR 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 197 FNGNWKIQLENTTD-LYHFPVVHK 219
>gi|148557084|ref|YP_001264666.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502274|gb|ABQ70528.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 429
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+S YTDP E+ R+F+ W V + ++ +P DF + IG +V R +G++H
Sbjct: 27 ASLYTDPDIFHREIERIFHGGWVWVAHESEIPEPGDFKTTEIGLSPIIVTRAKSGRVHVL 86
Query: 95 HNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF-NVKEFGLVPL 152
N CRH A++ + G S F CPYH W+YGLDG LL G + K+ L L
Sbjct: 87 LNRCRHKAATVCESQRGNTSSFTCPYHAWSYGLDGRLLGIPYEDGYDGLVDKKQLPLHAL 146
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
EV + + +M E E +DS + A W+ ++ G + +
Sbjct: 147 EVGIYAGLIFASMNPEV---EPLDSFLGPARPWI----DLFMHQGGGFPVKASGAHAFRF 199
Query: 212 ECNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P+ H+
Sbjct: 200 NGNWKIQLENTTD-AYHFPFVHR 221
>gi|383825292|ref|ZP_09980442.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium xenopi
RIVM700367]
gi|383335022|gb|EID13454.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium xenopi
RIVM700367]
Length = 447
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE ++ R WQ+ +++ P DF I + +V R D+ + A
Sbjct: 23 PKQRYYDPEFYALETELLWPRVWQMACRLEEIPKPGDFVEYEILDESIIVVRLDSQTVRA 82
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH + G+G + FVCP+HGW +GL+G T + + + ++ LVP
Sbjct: 83 YHNACRHRGVKIVEGNGSRRSFVCPFHGWCWGLNGDNTFVPRAEVFAEHNLRPQDLNLVP 142
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ WG +N+ +A + A+ + E L S L +
Sbjct: 143 VRCELWGGCAWINLDDDAPALRDC-LEPFASVYDAWKVESLRTEWWQSCL---------L 192
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGL 236
NWKV +++ GYHVP H L
Sbjct: 193 PVNWKVATAAFME-GYHVPQTHPQL 216
>gi|148557515|ref|YP_001265097.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502705|gb|ABQ70959.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 423
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y D A E+ V R W + ++ P D+F +G +V R +G I A+ N
Sbjct: 24 FYVDAGIFAAEMRDVLGRQWLYADHVSRIPRPGDYFLFEVGGESIIVVRRKDGTIGAYFN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
VCRH S I G S FVCPYH WTY LDG L A + DF ++ GL+P V
Sbjct: 84 VCRHRGSRICLDRQGSLSSFVCPYHAWTYDLDGALRGAAHMP--DDFERRDAGLMPCHVR 141
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
+ L + + E D + +A + L++NG+ + RR Y NW
Sbjct: 142 ELEGLIFLCLAE----GEAPDFDALAEI----ARPYLALNGL-APARLAARRSYPTSANW 192
Query: 216 KVFCDNYLDGGYHVPYAHK 234
K+ DN+ + YH AHK
Sbjct: 193 KLVVDNFQE-CYHCAPAHK 210
>gi|209514907|ref|ZP_03263776.1| anthranilate 1,2-dioxygenase, large subunit [Burkholderia sp. H160]
gi|209504533|gb|EEA04520.1| anthranilate 1,2-dioxygenase, large subunit [Burkholderia sp. H160]
Length = 462
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P ALE+ +F ++W + ++ P DF + + G +V R
Sbjct: 22 PAEGVYRIAREMFTEPELFALEMELIFEKAWIYACHESEIPQPHDFITMQAGRQPLIVSR 81
Query: 86 DDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFN 143
D +G +HA N C+H + L S G +S F CP+H W Y DG L+K + +DF+
Sbjct: 82 DGSGALHAMVNACQHRGATLTRMSKGNQSTFTCPFHAWCYKSDGRLVKVKAPSEYCEDFD 141
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
GL +A++ FV +++ A E ++LG + L + S
Sbjct: 142 KGARGLKKARIASYKGFVFVSLDVAATDSLE--------DYLGDTRVFLDMMVAQSPTGE 193
Query: 204 L----CRREYTIECNWKVFCDNYLDGGYHVPYAH 233
L R YT + NWK+ +N LD GYHV H
Sbjct: 194 LEVLPGRSTYTYDGNWKLQNENGLD-GYHVSTVH 226
>gi|345299636|ref|YP_004828994.1| Rieske (2Fe-2S) domain-containing protein [Enterobacter asburiae
LF7a]
gi|345093573|gb|AEN65209.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Enterobacter
asburiae LF7a]
Length = 437
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 9/208 (4%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+S YT +LEL R+F ++W V + ++ D F + IG +V RD G +H
Sbjct: 36 TSLYTSEDLFSLELDRIFSKTWVWVAHASEIPDTGSFKTTEIGTQPVIVVRDRKGTVHTL 95
Query: 95 HNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPL 152
N CRH A+ + SGK + FVCPYHGW Y LDG+L D E GLV L
Sbjct: 96 LNRCRHRAATVCEHRSGKTNSFVCPYHGWGYALDGSLRGVPHPESYADQLEKGELGLVSL 155
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
+ + + E D VA +W+ ++ G + +
Sbjct: 156 RTEQYAGMIFATFNDQIEPLE--DFLGVAKKWM----DLFMKQGAGYPIKTGPAHRFRFP 209
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N D GYH P H+ S +
Sbjct: 210 GNWKIQLENTTD-GYHFPVVHRSFLSSV 236
>gi|325982539|ref|YP_004294941.1| rieske (2Fe-2S) iron-sulfur domain [Nitrosomonas sp. AL212]
gi|325532058|gb|ADZ26779.1| Rieske (2Fe-2S) iron-sulfur domain [Nitrosomonas sp. AL212]
Length = 370
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 159/396 (40%), Gaps = 65/396 (16%)
Query: 10 NLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
N+ +L E + Q+PI+ WY DP L +E +F + VG+ + +
Sbjct: 3 NMAEVSQLT-EMSAQLPID--------WYLDPKILEIEKLILFDQGPGYVGHEVMVPNIG 53
Query: 70 DFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGT 129
D++ E V+ R++ G I NVCRH ++L G VCP H WTY LDG
Sbjct: 54 DYYVPERMEKARVLVRNEQG-IELLSNVCRHRQALLLNGRSNTKNIVCPIHRWTYALDGK 112
Query: 130 LLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS 189
LL A N+ + L W LL GK V Q+ +AN S+
Sbjct: 113 LLGAPHFDQNPCLNLAKTSL-----QNWNG--LLFSGKRNVSQD------LAN----LST 155
Query: 190 EILSINGIDSSLSYLCRREYT--IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS--- 244
++L G D S YL R ECNWK F + YL+ YHV H GL + +
Sbjct: 156 DVL--RGFDFS-GYLMDRVQVEHYECNWKTFIEVYLE-DYHVDSFHPGLGHFVNTEKLNW 211
Query: 245 -----YSTSLYEKVSIQRCESGS-------------TEGTDDTHRLGSKAIYAFIYPNFM 286
YS S + + GS TEG +H AI+ +PN M
Sbjct: 212 EFDNWYSAQTVAINSARLQKPGSPVYATWHEQVLQQTEGKMPSH----GAIWLLYFPNIM 267
Query: 287 INRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFIEQSLKDSEQVQMEDIILCE 345
+ Y + + ++P C V +++ + ++ F+E + ED +C
Sbjct: 268 LEWYPYTLVISTILPTGIESCMNVVEFYYPEEIALFERDFVEAEQAAYRETAREDEEICR 327
Query: 346 GVQRGLESPAYC-----SGRYAPSVEQTMYHFHSLL 376
+ G + Y SG Y +E M HFH L
Sbjct: 328 SITAGRRA-LYAQNLSESGPYQMPMEAGMEHFHQFL 362
>gi|420140927|ref|ZP_14648649.1| hypothetical protein PACIG1_4163 [Pseudomonas aeruginosa CIG1]
gi|421155416|ref|ZP_15614893.1| hypothetical protein PABE171_4252 [Pseudomonas aeruginosa ATCC
14886]
gi|421162216|ref|ZP_15621097.1| hypothetical protein PABE173_4657 [Pseudomonas aeruginosa ATCC
25324]
gi|403246300|gb|EJY60034.1| hypothetical protein PACIG1_4163 [Pseudomonas aeruginosa CIG1]
gi|404520558|gb|EKA31225.1| hypothetical protein PABE171_4252 [Pseudomonas aeruginosa ATCC
14886]
gi|404536475|gb|EKA46114.1| hypothetical protein PABE173_4657 [Pseudomonas aeruginosa ATCC
25324]
Length = 380
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 161/377 (42%), Gaps = 78/377 (20%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF
Sbjct: 12 AAHYTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAF 70
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVP 151
N C H S + T + VCPYH W++G +G L+ + + F+ +E GL
Sbjct: 71 LNQCPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSAEERARIGLRK 129
Query: 152 LEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L + G + +N+ + + +E+ D +L E+ S +D+ L Y C +
Sbjct: 130 LHLEEVGQLLFVNLADDPLPLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HK 179
Query: 211 IECNWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS-------------- 244
+ NWK+ +N D HVP+ H +GLA + S
Sbjct: 180 VRYNWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQEGETPEL 238
Query: 245 YSTSLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRY 290
S S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 239 RSLSFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQY 293
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEG 346
P+AP + + KD K A + ++ V ED ++ E
Sbjct: 294 D---------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLER 343
Query: 347 VQRGL--ESPAYCSGRY 361
+Q GL SP + G Y
Sbjct: 344 LQEGLGAHSPPFMHGDY 360
>gi|254239451|ref|ZP_04932773.1| hypothetical protein PA2G_00064 [Pseudomonas aeruginosa 2192]
gi|386060012|ref|YP_005976534.1| Phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase,
large terminal subunit [Pseudomonas aeruginosa M18]
gi|416853611|ref|ZP_11910252.1| putative phenylpropionate dioxygenase [Pseudomonas aeruginosa
138244]
gi|451987263|ref|ZP_21935421.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas aeruginosa
18A]
gi|126192829|gb|EAZ56892.1| hypothetical protein PA2G_00064 [Pseudomonas aeruginosa 2192]
gi|334845070|gb|EGM23637.1| putative phenylpropionate dioxygenase [Pseudomonas aeruginosa
138244]
gi|347306318|gb|AEO76432.1| Phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase,
large terminal subunit [Pseudomonas aeruginosa M18]
gi|451754881|emb|CCQ87944.1| GbcA Glycine betaine demethylase subunit A [Pseudomonas aeruginosa
18A]
gi|453048229|gb|EME95942.1| Phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase,
large terminal subunit [Pseudomonas aeruginosa
PA21_ST175]
Length = 376
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 161/377 (42%), Gaps = 78/377 (20%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF
Sbjct: 8 AAHYTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAF 66
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVP 151
N C H S + T + VCPYH W++G +G L+ + + F+ +E GL
Sbjct: 67 LNQCPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSAEERARIGLRK 125
Query: 152 LEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L + G + +N+ + + +E+ D +L E+ S +D+ L Y C +
Sbjct: 126 LHLEEVGQLLFVNLADDPLPLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HK 175
Query: 211 IECNWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS-------------- 244
+ NWK+ +N D HVP+ H +GLA + S
Sbjct: 176 VRYNWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQEGETPEL 234
Query: 245 YSTSLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRY 290
S S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 235 RSLSFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQY 289
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEG 346
P+AP + + KD K A + ++ V ED ++ E
Sbjct: 290 D---------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLER 339
Query: 347 VQRGL--ESPAYCSGRY 361
+Q GL SP + G Y
Sbjct: 340 LQEGLGAHSPPFMHGDY 356
>gi|258543266|ref|YP_003188699.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-01]
gi|384043186|ref|YP_005481930.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-12]
gi|384051703|ref|YP_005478766.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-03]
gi|384054810|ref|YP_005487904.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-07]
gi|384058045|ref|YP_005490712.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-22]
gi|384060686|ref|YP_005499814.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-26]
gi|384063978|ref|YP_005484620.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-32]
gi|384119989|ref|YP_005502613.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634344|dbj|BAI00320.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-01]
gi|256637402|dbj|BAI03371.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-03]
gi|256640454|dbj|BAI06416.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-07]
gi|256643511|dbj|BAI09466.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-22]
gi|256646566|dbj|BAI12514.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-26]
gi|256649619|dbj|BAI15560.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-32]
gi|256652607|dbj|BAI18541.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655663|dbj|BAI21590.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus IFO
3283-12]
Length = 421
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y++P +E+ R+F +W V + +L +P +F + +G +V RD G +H
Sbjct: 19 SIYSNPDLYDMEMDRIFMHNWIWVAHRSELPEPGEFITTFVGSHPVIVSRDRQGVVHVML 78
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG-IKDFNVKEFGLVPLE 153
N CRH A++ GK + FVCPYHGW YGLDG L G + + LV L
Sbjct: 79 NRCRHRGATVCEQKHGKAASFVCPYHGWAYGLDGALRGVPHQDGYTGQLDKSKLPLVNLR 138
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + K + E +WLG + ++ G + + ++T
Sbjct: 139 VEEYNGLIFATFDKSIMSLE---------DWLGRAKPWIDLFMKQGAYWPIKTMGEHKFT 189
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 190 FPGNWKIQLENTTD-AYHFPIVHK 212
>gi|340628138|ref|YP_004746590.1| putative dioxygenase [Mycobacterium canettii CIPT 140010059]
gi|433628291|ref|YP_007261920.1| Putative dioxygenase [Mycobacterium canettii CIPT 140060008]
gi|433643345|ref|YP_007289104.1| Putative dioxygenase [Mycobacterium canettii CIPT 140070008]
gi|340006328|emb|CCC45507.1| putative dioxygenase [Mycobacterium canettii CIPT 140010059]
gi|432155897|emb|CCK53148.1| Putative dioxygenase [Mycobacterium canettii CIPT 140060008]
gi|432159893|emb|CCK57206.1| Putative dioxygenase [Mycobacterium canettii CIPT 140070008]
Length = 382
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQL D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQLAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKE----AVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
L VATW V +N+ + AVH + D LG ++ S S+
Sbjct: 147 LPQFAVATWNGLVWINLDADAEPIAVHLDLTDDEFAGYR-LGEMVQV-------ESWSHE 198
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
R NWKV +N + YHV H+
Sbjct: 199 WR------ANWKVAAENGHE-NYHVLGLHR 221
>gi|393725551|ref|ZP_10345478.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas sp. PAMC
26605]
Length = 400
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 148/379 (39%), Gaps = 54/379 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P +Y + +L +F SW VG+ ++K P D+ S +G +V +G + A
Sbjct: 20 PQGFYNSAAAFEFDLAAIFGTSWLFVGFEAEIKRPGDYLSFLVGRWPVIVVHGRDGALRA 79
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH SIL G G + VCPYH WTYGLDG LL A+R+ DF GL P+
Sbjct: 80 FHNSCRHRGSILCKPGQGSAARIVCPYHSWTYGLDGRLLAASRMPA--DFEKSAHGLKPV 137
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
+ + L + D +V+ E + +L+ + ++ + L + IE
Sbjct: 138 HLERIAGALFLCLA-----DTPPDISVMRREL----TPLLAPHNLEH--AKLAYQSTLIE 186
Query: 213 -CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCE------------ 259
NWK+ +N + YH H L++ + + + S R E
Sbjct: 187 YANWKLVMENGRE-CYHCASGHPELSNAFPVHASAYFDLPDNSAARFEQRMADIAMPVGP 245
Query: 260 ------------------SGSTEGTDDTHRLGSKA-------IYAFIYPNFMINRYGPWM 294
+ +T G +L A + + PN + +
Sbjct: 246 VGEAWWQAVRFPLNDGAVAMTTTGQFSVGKLMCAAGDGNIGSLRWAVEPNNFCHSTSEYT 305
Query: 295 DTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEGVQRGLES 353
IP++PT VV + + + + +L Q ++D E Q G+ S
Sbjct: 306 FAFSAIPVSPTETHVVSKWLVHEDAVEGVDYDLPTLTHLWTQTNLQDKEFAENNQLGVNS 365
Query: 354 PAYCSGRYAPSVEQTMYHF 372
P Y G Y+P E F
Sbjct: 366 PGYSPGPYSPDAESLTLRF 384
>gi|224827058|ref|ZP_03700155.1| anthranilate 1,2-dioxygenase, large subunit [Pseudogulbenkiania
ferrooxidans 2002]
gi|224600724|gb|EEG06910.1| anthranilate 1,2-dioxygenase, large subunit [Pseudogulbenkiania
ferrooxidans 2002]
Length = 462
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + ++ +P DF + R G + +V R
Sbjct: 22 PAEGVYRMAREMFTEPELFELEMEFIFEKNWIYACHESEIPNPHDFITLRAGRMPMIVTR 81
Query: 86 DDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGI--KDF 142
D NG ++A N C+H + L S G +S F CP+H W Y DG LLK + G +DF
Sbjct: 82 DGNGGLNAMINACQHRGATLTRLSKGNQSTFTCPFHAWCYKNDGRLLK-VKAPGEYGEDF 140
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ GL + ++ FV +++ + + ++LG + + S
Sbjct: 141 DKSTRGLKKARIESYKGFVFISL--------DANGRDTLEDYLGDARVFFDMMVAQSPTG 192
Query: 203 YL----CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
L + YT + NWK+ +N LD GYHV H + +Q + + Q+
Sbjct: 193 ELEVLPGKSTYTFDGNWKLQNENGLD-GYHVSTVHYNYVATVQ-------HRQDANAQKG 244
Query: 259 ESGSTEGTDDTHRLGS 274
E+GS GT D +LG+
Sbjct: 245 EAGS--GTLDYSKLGA 258
>gi|423121987|ref|ZP_17109671.1| hypothetical protein HMPREF9690_03993 [Klebsiella oxytoca 10-5246]
gi|376393295|gb|EHT05955.1| hypothetical protein HMPREF9690_03993 [Klebsiella oxytoca 10-5246]
Length = 435
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+S YT ALE+ ++F ++W VG+ ++ D F S +G +V RD G I+
Sbjct: 30 TSLYTSGDIFALEIEKIFNQTWVWVGHESEVPDAGSFKSSMVGTQPVIVVRDRKGNINVL 89
Query: 95 HNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPL 152
N CRH A+ + SGK + FVCPYHGW YGLDG L D + + G+V L
Sbjct: 90 LNRCRHRAATVCEHRSGKTNSFVCPYHGWGYGLDGALRGVPHPESYGDTLDKAQLGMVRL 149
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
++ + ++ + D A +W+ ++ G L +
Sbjct: 150 RSESYAGMIFATFNQQM--EPLTDFLGPAMKWM----DLFMKQGAGYPLQATTAHRFRFP 203
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N D GYH P HK S +
Sbjct: 204 GNWKIQLENTTD-GYHFPIVHKSFLSSV 230
>gi|41407582|ref|NP_960418.1| hypothetical protein MAP1484c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395935|gb|AAS03801.1| hypothetical protein MAP_1484c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 461
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE + R WQ+ +++ P DF I + +V R D+ + A
Sbjct: 30 PKQRYYDPEFYALEKEMFWPRVWQMACRLEEIPKPGDFVEYEIHDESVIVVRLDSQTVRA 89
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH L G+G + FVCP+HGW + LDG T + ++ + LV
Sbjct: 90 YHNACRHRGVKLVEGNGNRRTFVCPFHGWCWSLDGRNTFVLRPETFAQENLAAADLRLVS 149
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWL---GGSSEILSINGIDSSLSYLCRRE 208
+ WG +N+ +A +W+ + + + + CR
Sbjct: 150 VRCELWGGCAWINLDDDA---------PALRDWMEPFASTYDAWRVESLRVEWWQSCR-- 198
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ NWK+ +++ GYHVP H L G Q S +++ V+
Sbjct: 199 --LPVNWKLATAAFME-GYHVPQTHPQLLPGAQTGEPSAAVHPVVA 241
>gi|433636241|ref|YP_007269868.1| Putative dioxygenase [Mycobacterium canettii CIPT 140070017]
gi|432167834|emb|CCK65356.1| Putative dioxygenase [Mycobacterium canettii CIPT 140070017]
Length = 382
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQL D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQLAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKE----AVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
L VATW V +N+ + AVH + D LG ++ S S+
Sbjct: 147 LPQFAVATWNGLVWINLDADAEPIAVHLDLTDDEFAGYR-LGEMVQV-------ESWSHE 198
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
R NWKV +N + YHV H+
Sbjct: 199 WR------ANWKVAAENGHE-NYHVLGLHR 221
>gi|433632262|ref|YP_007265890.1| Putative dioxygenase [Mycobacterium canettii CIPT 140070010]
gi|432163855|emb|CCK61283.1| Putative dioxygenase [Mycobacterium canettii CIPT 140070010]
Length = 382
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQL D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQLAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKE----AVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
L VATW V +N+ + AVH + D LG ++ S S+
Sbjct: 147 LPQFAVATWNGLVWINLDADAEPIAVHLDLTDDEFAGYR-LGEMVQV-------ESWSHE 198
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHK 234
R NWKV +N + YHV H+
Sbjct: 199 WR------ANWKVAAENGHE-NYHVLGLHR 221
>gi|372271170|ref|ZP_09507218.1| Rieske (2Fe-2S) domain-containing protein [Marinobacterium stanieri
S30]
Length = 429
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 21/224 (9%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ Y+DP EL +VF +W VG+ ++ + + + IG ++ RD +H
Sbjct: 25 KALYSDPEIFEEELDKVFNNTWVYVGHESEVPEAGCYKTAWIGRQPVILSRDRKMNLHVL 84
Query: 95 HNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLL---KATRITGIKDFNVKEFGLV 150
N CRH + + G GK F CPYHGW YGLDG L K G+ F+ K+F L
Sbjct: 85 QNRCRHRGATVCEGRKGKTKSFTCPYHGWGYGLDGALRALPKPEEYEGV--FDKKDFPLE 142
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRR 207
L V T+ V A ++++++S ++LGG+ + + + G L L
Sbjct: 143 SLRVETYQGLVF------ATYRDDIES---LEDFLGGAKKWIDLFMKQGGGYPLKVLGEH 193
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE 251
+ NWK+ +N D YH P HK + LD + +++
Sbjct: 194 RFNFPGNWKIQLENTTD-AYHFPIIHKSFVT--SLDDATADIFD 234
>gi|289759295|ref|ZP_06518673.1| hypothetical protein TBEG_02292 [Mycobacterium tuberculosis T85]
gi|289714859|gb|EFD78871.1| hypothetical protein TBEG_02292 [Mycobacterium tuberculosis T85]
Length = 194
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQL D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQLAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKEA 169
L VATW V +N+ +A
Sbjct: 147 LPQFAVATWNGLVWINLDADA 167
>gi|126666332|ref|ZP_01737311.1| Rieske (2Fe-2S) region [Marinobacter sp. ELB17]
gi|126629133|gb|EAZ99751.1| Rieske (2Fe-2S) region [Marinobacter sp. ELB17]
Length = 428
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P + Y D S L++ +F + W G T ++ + + +G +V RD+ G +
Sbjct: 34 PQALYNDASMFKLDMEEIFEKEWIFAGMTCEIPTRGSYITVEVGSNSVIVMRDNTGAVQG 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G F+ ++ L P+
Sbjct: 94 FHNVCRHRGSRLCSKAKGKVAKLVCPYHQWTYELDGRLLYAGNNMG-HAFDPSDYSLKPV 152
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
+V T G F+L+ + ++ ++ L E L +D ++ +
Sbjct: 153 QVKTGGGFILICLAEDP---------PAVDDLLFTLGEYLEPYDMD-NVKVAAESTLVEQ 202
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
NWK+ +N + YH AH L + LQ
Sbjct: 203 ANWKLVVENNRE-CYHCNGAHPELLNSLQ 230
>gi|118463093|ref|YP_882138.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium 104]
gi|118164380|gb|ABK65277.1| Rieske [2Fe-2S] domain protein [Mycobacterium avium 104]
Length = 450
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP F ALE + R WQ+ +++ P DF I + +V R D+ + A
Sbjct: 19 PKQRYYDPEFYALEKEMFWPRVWQMACRLEEIPKPGDFVEYEILDESVIVVRLDSQTVRA 78
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITGIKDFNVKEFGLVP 151
+HN CRH L G+G + FVCP+HGW + LDG T + ++ + LV
Sbjct: 79 YHNACRHRGVKLVEGNGNRRTFVCPFHGWCWSLDGRNTFVLRPETFAQENLAAADLRLVS 138
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWL---GGSSEILSINGIDSSLSYLCRRE 208
+ WG +N+ +A +W+ + + + + CR
Sbjct: 139 VRCELWGGCAWINLDDDA---------PALRDWMEPFASTYDAWRVESLRVEWWQSCR-- 187
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ NWK+ +++ GYHVP H L G Q S +++ V+
Sbjct: 188 --LPVNWKLATAAFME-GYHVPQTHPQLLPGAQTGEPSAAVHPVVA 230
>gi|375143356|ref|YP_005004005.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium rhodesiae
NBB3]
gi|359823977|gb|AEV76790.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium rhodesiae
NBB3]
Length = 452
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y P F LE+ R++ + WQ+ D + +P D+F R G ++ R D+G++ AF NV
Sbjct: 38 YYSPDFAKLEVERMWPKVWQLACTVDHVAEPGDYFEYRCGPYSVLIVRGDDGELRAFQNV 97
Query: 98 CRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
CRH + L GSG C YHGWT+ L G L + G + +F L+ + V T
Sbjct: 98 CRHRGNSLCDGSGSDLRELRCGYHGWTWDLAGALKRVPNRKGFGALRLTDFPLLGVRVET 157
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE--CN 214
W V +N+ +A + ++L + ++ N + + C TIE N
Sbjct: 158 WERLVFVNLDADA---------IPLRDYLEAMPDDIAWNRLG---EFRCYATMTIEVDAN 205
Query: 215 WKVFCDNYLDGGYHVPYAHKGL 236
WK D + + YH+ H L
Sbjct: 206 WKTIADGFSE-TYHIQTLHPEL 226
>gi|399078135|ref|ZP_10752735.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034073|gb|EJL27350.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 402
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E+A P Y++ ++ E+ +V SW + ++ +P F + I ++ R
Sbjct: 28 PLEQASVMPLKVYSNRAYHEREVEKVLRPSWHALARVHEVAEPGAFVTSAIFGEPVLIIR 87
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G + A NVCRH + L T G VCPYH WTY +DG L A ++ I+ F+ K
Sbjct: 88 GKDGVLRALSNVCRHRGTQLMTDCGVAKALVCPYHSWTYNIDGGLRGAPQMNKIEGFDPK 147
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
L ++ W FV +N+ +A E + + A +E L++ +D +S +
Sbjct: 148 TVRLPEFKLEVWNGFVFVNLDPQA---EPLAGQISA------LTEKLAVYKLDDWVS-VP 197
Query: 206 RREYTIECNWKVFCDNYLDGGYHV 229
+E+ + NWK+ +N+ + +H+
Sbjct: 198 WKEFEFDWNWKISLENFSEAYHHI 221
>gi|34392410|dbj|BAC82526.1| large subunit of terminal dioxygenase in aniline dioxygenase
[Frateuria sp. ANA-18]
Length = 447
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTD S A E++ +F +W V + ++ +P DF +G E VV RD+ G IH F N
Sbjct: 34 YTDESIFAREMNNIFAATWVYVAHESEVSEPNDFKQTWLGTREVVVTRDEEGAIHVFSNR 93
Query: 98 CRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK----DFNVKEFGLV-PL 152
C H + + F CPYHGW + G L I G F ++ L P
Sbjct: 94 CSHRGASVCREQRGNFEFTCPYHGWRFDNHGQLFG---IPGKNAYGPTFKARDMHLARPA 150
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSINGIDSSLSYLCRREYT 210
+VA++ FV + +A E N ++W + NG +L + +
Sbjct: 151 QVASYKGFVFATLNPDAPPLAEHLGNAARYLDDW-------IDHNGGAGNLILSGAQRFR 203
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGL 236
+ CNWK+ DN D GYHVP++H+ L
Sbjct: 204 LACNWKLVWDNAGD-GYHVPFSHQSL 228
>gi|378762880|ref|YP_005191496.1| Rieske 2Fe-2S family protein [Sinorhizobium fredii HH103]
gi|365182508|emb|CCE99357.1| Rieske 2Fe-2S family protein [Sinorhizobium fredii HH103]
Length = 412
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 154/384 (40%), Gaps = 64/384 (16%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YT P+ L+L +FYR W QL + + R+G E ++ R +G+I AFHN
Sbjct: 25 FYTSPAIYELDLEHIFYREWLYAVPACQLGKAGSYVTMRVGAYEVIIVRARDGEIRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G G+ + VCPYH WTY LDG L+ A + DF+ + GL P+ +
Sbjct: 85 SCRHRGSLICKGRQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKHGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
+ + + + E +A +L I +N ++ ++Y + NW
Sbjct: 143 NLEGLIYICLSETPPDFEPFAE--LARPYLA----IHDLN--EAKVAYTS--TIVEKANW 192
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGLQLD--------SYSTSLYEKVSIQRCESGSTEGT- 266
K+ +N + YH H L LD S S + RCE+
Sbjct: 193 KLVWENNRE-CYHCSSNHPALCRSFPLDPDVAGVSPDGSVSAKLRAHFDRCEASGAPAQF 251
Query: 267 ----DDTHRLG-----SKAIYAFIYPNFMINRYGPWMD---------------------- 295
D +RL A+ + +NR W+
Sbjct: 252 RIAGDGQYRLARMPLQENALSYTLDGKAAVNRNLGWVALPDAGTLLKFHYPSTWNHFLPD 311
Query: 296 ---TNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDIILCEGVQ 348
T V PL+P +V + + KD ++ LK +V + ED + E Q
Sbjct: 312 HSLTFRVTPLSPMETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDREIVETNQ 368
Query: 349 RGLESPAYCSGRYAPSVEQTMYHF 372
+G+ SPAY G Y+ + E + F
Sbjct: 369 QGILSPAYVPGPYSSNQESGVIQF 392
>gi|306843184|ref|ZP_07475800.1| biphenyl dioxygenase subunit alpha [Brucella sp. BO2]
gi|306286635|gb|EFM58202.1| biphenyl dioxygenase subunit alpha [Brucella sp. BO2]
Length = 415
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG +V RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIVVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|265984500|ref|ZP_06097235.1| Rieske domain-containing protein [Brucella sp. 83/13]
gi|306839269|ref|ZP_07472086.1| Rieske 2Fe-2S family protein [Brucella sp. NF 2653]
gi|264663092|gb|EEZ33353.1| Rieske domain-containing protein [Brucella sp. 83/13]
gi|306405816|gb|EFM62078.1| Rieske 2Fe-2S family protein [Brucella sp. NF 2653]
Length = 415
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG +V RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIVVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|395794062|ref|ZP_10473398.1| phenylpropionate dioxygenase large terminal subunit [Pseudomonas
sp. Ag1]
gi|395341795|gb|EJF73600.1| phenylpropionate dioxygenase large terminal subunit [Pseudomonas
sp. Ag1]
Length = 427
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL ++FYR+W V + ++ + DF IG +V RD G I+
Sbjct: 27 SLYNDPALFEAELEKIFYRTWVWVAHESEVLNSGDFKIATIGRRPVIVVRDKKGAINVLE 86
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G + F CPYH W+YGLDG L G + K E L L
Sbjct: 87 NRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRALPYPDGYEGILEKSELPLTSLR 146
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI---NGIDSSLSYLCRREYT 210
V ++ V A + ++++ ++LGG+ + + G + +++
Sbjct: 147 VDSYAGMVF------ASYNDDIEP---LADFLGGAKHWMDLFMKQGAGYPIKTQGEHKFS 197
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
+ NWK+ +N D GYH P HK S + ++
Sbjct: 198 FKGNWKIQLENTTD-GYHFPIVHKSFMSSVDAET 230
>gi|126731634|ref|ZP_01747439.1| ring hydroxylating dioxygenase, Rieske (2Fe-2S) protein [Sagittula
stellata E-37]
gi|126707800|gb|EBA06861.1| ring hydroxylating dioxygenase, Rieske (2Fe-2S) protein [Sagittula
stellata E-37]
Length = 424
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+ Y DP A E+ +VF R+W V + + D F +G +V RD GKIH
Sbjct: 24 TEMYEDPDLFAEEMEKVFKRTWVFVAHESEFPDKGSFKLSNVGLEPVIVVRDRKGKIHCM 83
Query: 95 HNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTL--LKATRITGIKDFNVKEFGLVP 151
N CRH A++ GK + F CPYHGW Y LDG+L L G DF+ + GL+
Sbjct: 84 VNRCRHRAATVCEVKKGKTASFQCPYHGWGYALDGSLRALPYPEQYG-DDFDKAQHGLLK 142
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS----EILSINGIDSSLSYLCRR 207
L + V A ++++ V ++LG ++ G + L
Sbjct: 143 LRTEAYNGMVF------ATFNDDIEPLV---DFLGPEVCRYIDLFMKQGGGFPVKVLGEH 193
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE 251
++T+ NWKV +N D YH P HK LD + +++
Sbjct: 194 QFTVPMNWKVQLENTTD-AYHFPVVHKSFMQ--TLDGATNEMFD 234
>gi|393773448|ref|ZP_10361846.1| Rieske (2Fe-2S) iron-sulfur domain protein [Novosphingobium sp. Rr
2-17]
gi|392721328|gb|EIZ78795.1| Rieske (2Fe-2S) iron-sulfur domain protein [Novosphingobium sp. Rr
2-17]
Length = 411
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 41/289 (14%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q + ++L+ P+ YT ++ E VF R W +G+ + DP D+F+ + ++
Sbjct: 29 QGDVSESLSLPAECYTSEAWFEFEKRAVFDREWIALGHVGAIPDPGDYFTLEVFGEPLMI 88
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF- 142
R +G++ +VCRH +L G F CP+HGW+Y L+G L A + G F
Sbjct: 89 VRGKDGEVRVLSSVCRHRGHLLGDAQGNAKDFTCPFHGWSYDLEGNLTAAPEMEGTLPFE 148
Query: 143 NVKEFGLVP-LEVATWGPFVLLNMGKEAVHQEEVD------SNVVANEWLGGSSEILSIN 195
+K +P A W FV +N EA E +D S +V N +GG + I +
Sbjct: 149 ELKRTACLPTFRSAIWNGFVFVNFDGEA---EPLDGRLKALSELVRNHNMGGLASITPVE 205
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL-----ASGLQLDSYSTS-- 248
+ + NWK+ +N L+ YH Y H G+ +S ++ + S
Sbjct: 206 WPGN------------KWNWKLMQENALE-PYHTHYLHTGIHDFAPSSNVKFAEWDESDD 252
Query: 249 --LYEKVSIQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMI 287
+Y +V + G D T S+ ++A + PN
Sbjct: 253 GAIYREVGFTHIDGGFNIAEKALFPALPDLTDEERSRVVFAGVMPNLFF 301
>gi|226935208|gb|ACO92656.1| aniline dioxygenase terminal oxygenase component (alpha subunit)
[Burkholderia sp. JS667]
Length = 448
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTD A E+ +F +W + + ++ +P DF IG E VV RD+ G I F N
Sbjct: 34 YTDEGIFAREMDNIFAATWVYLAHKSEIPEPNDFKQAWIGMRELVVTRDEGGDIRVFSNR 93
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN--VKEFGL---VP 151
C H AS+ G + F CPYHGW + G L I G + K+ G+ P
Sbjct: 94 CSHRGASVCREHRGNATDFTCPYHGWRFDNRGQLFG---IPGKNAYGPAFKQRGMHLARP 150
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSINGIDSSLSYLCRREY 209
+VA++ FV + +A E N + W + NG +L + +
Sbjct: 151 AQVASYKGFVFATLNPDAPSLAEHLGNAAPYLDAW-------IDHNGGPENLRLAGAQRF 203
Query: 210 TIECNWKVFCDNYLDGGYHVPYAHKGL 236
+ CNWK+ DN D GYHVP++H+ L
Sbjct: 204 RLACNWKLVWDNAGD-GYHVPFSHQSL 229
>gi|150395708|ref|YP_001326175.1| Rieske (2Fe-2S) domain-containing protein [Sinorhizobium medicae
WSM419]
gi|150027223|gb|ABR59340.1| Rieske (2Fe-2S) domain protein [Sinorhizobium medicae WSM419]
Length = 414
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 155/374 (41%), Gaps = 42/374 (11%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP + +L +++YR W +G+ ++ P ++F+ ++GE V+ RD G I A H
Sbjct: 23 AFYVDPGYYRQDLEQIWYRDWLFIGHDCEIPRPGNYFTVQVGEYPVVLVRDRQGAIRALH 82
Query: 96 NVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + T G + VCPYH WTY LDG LL A ++ + F+ E L +
Sbjct: 83 NSCRHRGSRVCTQHRGSSAKLVCPYHQWTYELDGRLLFARQMP--EGFDPAEHSLKAIHC 140
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSS---EILSINGIDSSLSYLCRRE 208
T G ++ +++ E V + V +A LG + E + + L + RE
Sbjct: 141 ETVGGYIFISLADEPVDFRQFRETVAAYLAPHRLGETKVAFESTIVEKGNWKLVWENNRE 200
Query: 209 -YTIECNWKVFCDNYLD----------------GGYHVPYAHKGLASGLQLDSYSTSLYE 251
Y N C Y + G + + GL S ++
Sbjct: 201 CYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWRKCENAGLPSAFRIAPTGQFRMT 260
Query: 252 KVS-IQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL 302
++ I ES + G + + G + F YP + G T V+PL
Sbjct: 261 RMPLINGAESYTMSGQSAVLKPLSPQVNASGIGTLLLFHYPTTWNHILGDHAITFRVLPL 320
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCS 358
P +V + ++ K+ ++ +++D V E D + E G+ SPAY
Sbjct: 321 GPELTEVTTKWLVN---KEAVEGVDYTIEDLTHVWTETNDQDRQIVEENAFGIRSPAYEP 377
Query: 359 GRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 378 GPYSAEHEGGVMQF 391
>gi|78063343|ref|YP_373251.1| ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein [Burkholderia sp. 383]
gi|77971228|gb|ABB12607.1| ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein [Burkholderia sp. 383]
Length = 427
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHESELPNPGDFITTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ + G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCESHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCEKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + D+ ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASFN---------DAIEPLEDFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|265995355|ref|ZP_06107912.1| Rieske domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|262766468|gb|EEZ12257.1| Rieske domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
Length = 415
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|288916766|ref|ZP_06411140.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
gi|288351840|gb|EFC86043.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
Length = 429
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 116/279 (41%), Gaps = 41/279 (14%)
Query: 41 PSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR--IGEVEFVVCRDDNGKIHAFHNVC 98
P F LE +F R+W VG +QL FF+ + + ++ RD +G++ AFHNVC
Sbjct: 32 PEFYELEREAIFKRAWLNVGRVEQLPRKGSFFTKNLDVAKTAVIIARDMDGRVRAFHNVC 91
Query: 99 RHHASILA-------TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
RH + L SG F+C YHGW YGLDG L + DF+ +F LV
Sbjct: 92 RHRGNKLVWENTPKHETSGVCRQFMCRYHGWRYGLDGQLKFVLQEEEFFDFDKADFPLVS 151
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ W F+ +N+ E + E+LG + G++ +L Y
Sbjct: 152 VHCEVWEGFIFINLADEP--------SQTLPEFLGP-----MVRGLEGYPFHLVTERYAY 198
Query: 212 EC----NWKVFCDNYLDGGYHVPYAH--------KGLASGLQLDSYSTSLYEKVSIQRCE 259
+ NWK++ D + + YH H + SG + Y T ++
Sbjct: 199 KADLLSNWKIYLDAFQE-YYHASVLHSQQQVPSLRSFESGFKAPYYQTDGPHRL----VS 253
Query: 260 SGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNL 298
+G +G H L +Y I PN GPW ++
Sbjct: 254 TGGWKGV-PRHLLPRDQMYP-IEPNIEAGLMGPWQRPDI 290
>gi|17986832|ref|NP_539466.1| benzoate 1,2-dioxygenase subunit alpha [Brucella melitensis bv. 1
str. 16M]
gi|260565313|ref|ZP_05835797.1| Rieske 2Fe-2S family protein [Brucella melitensis bv. 1 str. 16M]
gi|17982466|gb|AAL51730.1| benzoate 1,2-dioxygenase alpha subunit [Brucella melitensis bv. 1
str. 16M]
gi|260151381|gb|EEW86475.1| Rieske 2Fe-2S family protein [Brucella melitensis bv. 1 str. 16M]
Length = 415
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFHN
Sbjct: 24 FYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 84 SCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHCE 141
Query: 156 TWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 142 TVAGYIYICVAEEA 155
>gi|225852941|ref|YP_002733174.1| biphenyl dioxygenase subunit alpha [Brucella melitensis ATCC 23457]
gi|256263578|ref|ZP_05466110.1| Rieske 2Fe-2S family protein [Brucella melitensis bv. 2 str. 63/9]
gi|384211827|ref|YP_005600909.1| biphenyl dioxygenase subunit alpha [Brucella melitensis M5-90]
gi|384408937|ref|YP_005597558.1| biphenyl dioxygenase subunit alpha [Brucella melitensis M28]
gi|384445499|ref|YP_005604218.1| Biphenyl dioxygenase subunit alpha [Brucella melitensis NI]
gi|225641306|gb|ACO01220.1| Biphenyl dioxygenase subunit alpha [Brucella melitensis ATCC 23457]
gi|263093628|gb|EEZ17633.1| Rieske 2Fe-2S family protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409484|gb|ADZ66549.1| biphenyl dioxygenase subunit alpha [Brucella melitensis M28]
gi|326539190|gb|ADZ87405.1| biphenyl dioxygenase subunit alpha [Brucella melitensis M5-90]
gi|349743488|gb|AEQ09031.1| Biphenyl dioxygenase subunit alpha [Brucella melitensis NI]
Length = 415
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|265991517|ref|ZP_06104074.1| Rieske domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263002301|gb|EEZ14876.1| Rieske domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 415
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFHN
Sbjct: 24 FYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 84 SCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHCE 141
Query: 156 TWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 142 TVAGYIYICVAEEA 155
>gi|161619407|ref|YP_001593294.1| biphenyl dioxygenase subunit alpha [Brucella canis ATCC 23365]
gi|225627906|ref|ZP_03785942.1| Biphenyl dioxygenase subunit alpha [Brucella ceti str. Cudo]
gi|260566036|ref|ZP_05836506.1| Rieske 2Fe-2S family protein [Brucella suis bv. 4 str. 40]
gi|261214443|ref|ZP_05928724.1| Rieske domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|261219222|ref|ZP_05933503.1| Rieske domain-containing protein [Brucella ceti M13/05/1]
gi|261222602|ref|ZP_05936883.1| Rieske domain-containing protein [Brucella ceti B1/94]
gi|261315635|ref|ZP_05954832.1| Rieske domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261318071|ref|ZP_05957268.1| Rieske domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322283|ref|ZP_05961480.1| Rieske domain-containing protein [Brucella ceti M644/93/1]
gi|261325524|ref|ZP_05964721.1| Rieske domain-containing protein [Brucella neotomae 5K33]
gi|261752750|ref|ZP_05996459.1| Rieske domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261755410|ref|ZP_05999119.1| Rieske domain-containing protein [Brucella suis bv. 3 str. 686]
gi|261758639|ref|ZP_06002348.1| Rieske 2Fe-2S family protein [Brucella sp. F5/99]
gi|265989104|ref|ZP_06101661.1| Rieske domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|265998567|ref|ZP_06111124.1| Rieske domain-containing protein [Brucella ceti M490/95/1]
gi|376275926|ref|YP_005116365.1| Rieske domain-containing protein [Brucella canis HSK A52141]
gi|161336218|gb|ABX62523.1| Biphenyl dioxygenase subunit alpha [Brucella canis ATCC 23365]
gi|225617069|gb|EEH14115.1| Biphenyl dioxygenase subunit alpha [Brucella ceti str. Cudo]
gi|260155554|gb|EEW90634.1| Rieske 2Fe-2S family protein [Brucella suis bv. 4 str. 40]
gi|260916050|gb|EEX82911.1| Rieske domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260921186|gb|EEX87839.1| Rieske domain-containing protein [Brucella ceti B1/94]
gi|260924311|gb|EEX90879.1| Rieske domain-containing protein [Brucella ceti M13/05/1]
gi|261294973|gb|EEX98469.1| Rieske domain-containing protein [Brucella ceti M644/93/1]
gi|261297294|gb|EEY00791.1| Rieske domain-containing protein [Brucella pinnipedialis B2/94]
gi|261301504|gb|EEY05001.1| Rieske domain-containing protein [Brucella neotomae 5K33]
gi|261304661|gb|EEY08158.1| Rieske domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261738623|gb|EEY26619.1| Rieske 2Fe-2S family protein [Brucella sp. F5/99]
gi|261742503|gb|EEY30429.1| Rieske domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261745163|gb|EEY33089.1| Rieske domain-containing protein [Brucella suis bv. 3 str. 686]
gi|262553191|gb|EEZ09025.1| Rieske domain-containing protein [Brucella ceti M490/95/1]
gi|264661301|gb|EEZ31562.1| Rieske domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|363404493|gb|AEW14788.1| Rieske domain-containing protein [Brucella canis HSK A52141]
Length = 415
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|374335384|ref|YP_005092071.1| Rieske (2Fe-2S) domain-containing protein [Oceanimonas sp. GK1]
gi|372985071|gb|AEY01321.1| Rieske (2Fe-2S) domain-containing protein [Oceanimonas sp. GK1]
Length = 422
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 159/385 (41%), Gaps = 61/385 (15%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P + Y P A ++ ++F + W VG T ++ +F + +G + R+ +G I A
Sbjct: 30 PQACYNSPEVFAADMEQIFCKEWLYVGLTCEIPQIGNFMTLDVGNNPITIVRNKHG-IQA 88
Query: 94 FHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S I GK + VCPYH WTY LDG L+ A G + FN +F L +
Sbjct: 89 FHNVCRHRGSRICIPKKGKVAKMVCPYHQWTYELDGDLIYAGNEMG-ESFNKADFPLKQV 147
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
T G ++ +++ A + E+D ++L + L ++++ + E +
Sbjct: 148 HTKTAGGYIFISL---ADNPPEID------DFLAELARYLEPYDLENA-KVAVQSEILED 197
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL-----QLDSYSTSLYEKVSIQRCESGSTEGTD 267
NWK+ +N + YH +H L + L D +T ++ ++ EG
Sbjct: 198 ANWKLVIENNRE-CYHCAGSHPELLNTLLEWDDTNDPRATDAFKAHVARKAAEWDAEGIP 256
Query: 268 DTH---------------------------------------RLGSKAIYAFIYPNFMIN 288
H LGS I PN +
Sbjct: 257 HEHVSFGLRNRMVRMPLAEGKVAMTIDGSPGCQKTLGRVQNRDLGSLRILHL--PNSWNH 314
Query: 289 RYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGV 347
G + T VIP+ P + KV+ + + + + +E+ + + +D L E
Sbjct: 315 GQGDHLITFQVIPVGPQQTKVITKWVVHKDAVEGVDYDVEKLRRVWDATNAQDRALAEEN 374
Query: 348 QRGLESPAYCSGRYAPSVEQTMYHF 372
QRG+ S AY G Y+P+ E + +F
Sbjct: 375 QRGINSMAYEPGPYSPTYEFGVVNF 399
>gi|163843713|ref|YP_001628117.1| biphenyl dioxygenase subunit alpha [Brucella suis ATCC 23445]
gi|163674436|gb|ABY38547.1| Biphenyl dioxygenase subunit alpha [Brucella suis ATCC 23445]
Length = 415
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|148560364|ref|YP_001259349.1| Rieske 2Fe-2S family protein [Brucella ovis ATCC 25840]
gi|148371621|gb|ABQ61600.1| Rieske 2Fe-2S family protein [Brucella ovis ATCC 25840]
Length = 405
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFHN
Sbjct: 14 FYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFHN 73
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 74 SCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHCE 131
Query: 156 TWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 132 TVAGYIYICVAEEA 145
>gi|383820590|ref|ZP_09975845.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium phlei
RIVM601174]
gi|383334824|gb|EID13258.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium phlei
RIVM601174]
Length = 441
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P + P+ Y P F LE R++ R WQ+ D + +P D+F R G ++
Sbjct: 17 PPARPTLVPAERYHSPEFARLENERMWPRVWQLACTVDHVAEPGDYFEYRCGPYSVLIVH 76
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D+G++ AF NVCRH + L GSG + + C YHGWT+ L G L + G + ++
Sbjct: 77 GDDGELRAFQNVCRHRGNSLCAGSGSQLTELRCGYHGWTWDLTGQLRRVPNRKGFGELHL 136
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVAN-EW--LGGSSEILSINGIDSSL 201
L+P V W V +N+ ++A+ + + A+ W LG
Sbjct: 137 AGLPLLPARVEAWERLVFVNLDRDAMPLPDYLEQMPADTAWCRLG--------------- 181
Query: 202 SYLCRREYTIE--CNWKVFCDNYLDGGYHVPYAHKGL 236
+ C TI+ NWK D Y + YH+ H L
Sbjct: 182 DFRCYATMTIDVAANWKTIADGYSE-TYHIQTLHPEL 217
>gi|110680023|ref|YP_683030.1| Rieske (2Fe-2S) domain-containing protein [Roseobacter
denitrificans OCh 114]
gi|109456139|gb|ABG32344.1| Rieske 2Fe-2S domain protein, putative [Roseobacter denitrificans
OCh 114]
Length = 386
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 161/376 (42%), Gaps = 47/376 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQ---VVGYTDQLKD--PQDFFSGRIGEVE 80
PI +A P++ YTD + E + + W V Q+ D P DF V
Sbjct: 14 PIAQANGLPNAHYTDAAVFDEEKQALLFAGWSGLAVAADVPQVGDAVPLDFLG-----VP 68
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGI 139
++ RD K+ F N+CRH IL + + CPYH W Y +G L+ + G
Sbjct: 69 LLLIRDRQDKVRVFQNICRHRGMILVDAPRRIEGAIRCPYHSWCYSTEGHLVSTPHVGGP 128
Query: 140 -----KDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSI 194
+ + GL+ + W V +N+ A + ++ ++A W +
Sbjct: 129 GQNRHEGIDRALLGLIEVRSHIWMGVVWINLSGTAADFDVANAKMMAR-WQEFDKPLYH- 186
Query: 195 NGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL---------DSY 245
G +S + ++CNWK+ +NY + YH+P+ H GL S +L D++
Sbjct: 187 GGSESRFTL------EVKCNWKLAVENYCES-YHLPWVHPGLNSYSRLEDHYHIEEDDAF 239
Query: 246 S---TSLYEKVSIQRCESGSTEGTDD--THRLGSKAIYAFIYPNFMINRYGPWMDTNLVI 300
S T +Y ++ R +G++ D + + + A Y +PN ++ G D I
Sbjct: 240 SGQGTLVYRQI---RDAAGNSFPDFDALSDKWDTAAEYITGFPNVLL---GVHRDHTFAI 293
Query: 301 PLAPTRCKVVFD--YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCS 358
L P + + Y +A Q+ + V ED+ + EG+QRG + ++
Sbjct: 294 ILQPVGPEKTLEHVYLFYAQPDTSEALRIQNAAQWKTVFEEDVFVVEGMQRGRHAVSFDG 353
Query: 359 GRYAPSVEQTMYHFHS 374
GR++P+++ + FH+
Sbjct: 354 GRFSPAMDGPTHLFHA 369
>gi|407719733|ref|YP_006839395.1| dioxygenase Rieske 2Fe-2S family protein [Sinorhizobium meliloti
Rm41]
gi|407317965|emb|CCM66569.1| putative dioxygenase Rieske 2Fe-2S family protein [Sinorhizobium
meliloti Rm41]
Length = 414
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 156/374 (41%), Gaps = 42/374 (11%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP + +L +++Y+ W +G+ ++ P ++F+ ++G+ VV RD G + A H
Sbjct: 23 AFYVDPDYYRQDLEQIWYKDWLFIGHDCEVPRPGNYFTAQVGDYPVVVVRDRQGAVRALH 82
Query: 96 NVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + T G + VCPYH WTY LDG LL A ++ + F+ E L P+
Sbjct: 83 NSCRHRGSRVCTQHKGSSAKLVCPYHQWTYELDGRLLFARQMP--EGFDPAEHSLKPIHC 140
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSS---EILSINGIDSSLSYLCRRE 208
T G ++ +++ + + V +A LG + E + + L + RE
Sbjct: 141 ETVGGYIFISLAEHPMDFRPFRETVAAYLAPHRLGETKVAFESTIVEKGNWKLVWENNRE 200
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVPY--AH------KGLASGLQLDSYSTSLYE 251
Y N C Y + G + P AH GL S ++
Sbjct: 201 CYHCAANHPELCRTYPEAPTVTGVQGAMNDPEIGAHWQKCEAAGLPSAFKIAPTGQFRMT 260
Query: 252 KVS-IQRCESGSTEGTDDTHRLGSKAIYA--------FIYPNFMINRYGPWMDTNLVIPL 302
++ I ES + G + S + A F YP + G T V+PL
Sbjct: 261 RMPLINGAESYTMSGQKAVRKQLSAGVDADGIGTLLLFHYPTTWNHILGDHAITFRVLPL 320
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCS 358
P +V + ++ KD ++ ++ + V E D + E G+ SPAY
Sbjct: 321 GPELTEVTTKWLIN---KDAVEGVDYTIDELTHVWTETNDQDRQIVEENAFGIRSPAYEP 377
Query: 359 GRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 378 GPYSAEHEGGVMQF 391
>gi|23502330|ref|NP_698457.1| Rieske 2Fe-2S family protein [Brucella suis 1330]
gi|376281122|ref|YP_005155128.1| Rieske 2Fe-2S family protein [Brucella suis VBI22]
gi|384225116|ref|YP_005616280.1| Rieske 2Fe-2S family protein [Brucella suis 1330]
gi|23348309|gb|AAN30372.1| Rieske 2Fe-2S family protein [Brucella suis 1330]
gi|343383296|gb|AEM18788.1| Rieske 2Fe-2S family protein [Brucella suis 1330]
gi|358258721|gb|AEU06456.1| Rieske 2Fe-2S family protein [Brucella suis VBI22]
Length = 405
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFHN
Sbjct: 14 FYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFHN 73
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 74 SCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHCE 131
Query: 156 TWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 132 TVAGYIYICVAEEA 145
>gi|256369877|ref|YP_003107388.1| Rieske 2Fe-2S family protein [Brucella microti CCM 4915]
gi|340791068|ref|YP_004756533.1| Rieske 2Fe-2S family protein [Brucella pinnipedialis B2/94]
gi|256000040|gb|ACU48439.1| Rieske 2Fe-2S family protein [Brucella microti CCM 4915]
gi|340559527|gb|AEK54765.1| Rieske 2Fe-2S family protein [Brucella pinnipedialis B2/94]
Length = 405
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFHN
Sbjct: 14 FYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFHN 73
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P+
Sbjct: 74 SCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPVHCE 131
Query: 156 TWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 132 TVAGYIYICVAEEA 145
>gi|206562509|ref|YP_002233272.1| putative ring-hydroxylating subunit alpha [Burkholderia cenocepacia
J2315]
gi|421865816|ref|ZP_16297490.1| Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein [Burkholderia cenocepacia H111]
gi|444358150|ref|ZP_21159603.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia cenocepacia BC7]
gi|444370455|ref|ZP_21170128.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia cenocepacia K56-2Valvano]
gi|198038549|emb|CAR54507.1| putative ring-hydroxylating alpha subunit [Burkholderia cenocepacia
J2315]
gi|358073957|emb|CCE48368.1| Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein [Burkholderia cenocepacia H111]
gi|443597418|gb|ELT65846.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia cenocepacia K56-2Valvano]
gi|443604716|gb|ELT72626.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia cenocepacia BC7]
Length = 427
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHASELPNPGDFITTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + +A+ E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASF-NDAIEPLE--------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|13183740|gb|AAK15331.1|AF332547_8 unknown [Pseudomonas aeruginosa]
Length = 378
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 160/374 (42%), Gaps = 78/374 (20%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF N
Sbjct: 13 YTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAFLNQ 71
Query: 98 CRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVPLEV 154
C H S + T + VCPYH W++G +G L+ + + F+ +E GL L +
Sbjct: 72 CPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSAEERARIGLRKLHL 130
Query: 155 ATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
G + +N+ + + +E+ D +L E+ S +D+ L Y C + +
Sbjct: 131 EEVGQLLFVNLADDPLPLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HKVRY 180
Query: 214 NWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS--------------YST 247
NWK+ +N D HVP+ H +GLA + S S
Sbjct: 181 NWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQEGETPELRSL 239
Query: 248 SLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRYGPW 293
S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 240 SFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQYD-- 292
Query: 294 MDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEGVQR 349
P+AP + + KD K A + ++ V ED ++ E +Q+
Sbjct: 293 -------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLERLQK 344
Query: 350 GLES--PAYCSGRY 361
GL + P + G Y
Sbjct: 345 GLGAHWPPFMHGDY 358
>gi|115360098|ref|YP_777236.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
AMMD]
gi|115285386|gb|ABI90902.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria AMMD]
Length = 427
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHDSELPNPGDFITTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ + G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCESHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCEKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + + E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASFNDDIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|167645765|ref|YP_001683428.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. K31]
gi|167348195|gb|ABZ70930.1| Rieske (2Fe-2S) domain protein [Caulobacter sp. K31]
Length = 401
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ A T P + YTD +F A E +F W VG D +K D+F+ I +V R+
Sbjct: 26 VGAAETLPPACYTDAAFYAFEKEALFNHEWLCVGRVDWVKAQGDYFTTTIIGEPIIVTRN 85
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ +I A VC+H A ++A G G FVCPYH W Y L+G L+ A + DF+ K
Sbjct: 86 RSDEIKAMSAVCQHRAMLVAEGRGNTRGFVCPYHHWVYSLNGDLVNAPAMERTCDFDKKS 145
Query: 147 FGLVPLEVATWGPFVLLNMGKEA---VHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
L +V W F+ +N A + E + +AN ++ + G+ ++
Sbjct: 146 IKLPTFKVEVWLGFIFINFDDAAPPLAPRLEAVESAIAN------FDLSNAEGLTPPMT- 198
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKG 235
NWKV +N D GYH H+G
Sbjct: 199 -----GQFAWNWKVMFENNND-GYHANKLHRG 224
>gi|407691407|ref|YP_006814991.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti Rm41]
gi|407322582|emb|CCM71184.1| Ring-hydroxylating dioxygenase [Sinorhizobium meliloti Rm41]
Length = 412
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 160/390 (41%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y P AL+L +FYR W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYVSPEIYALDLEHIFYREWLYAVPACQLARTGSYVTLRVGAYEVVIVRSRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGST- 263
NWK+ +N + YH H L LD + + RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQAHFDRCEAAGTP 248
Query: 264 ---------------------------EGTDDTHR-LGSKA------IYAFIYPNFMINR 289
+G R LG A + F YP+ N
Sbjct: 249 AQFVLAGYGAYRLARMPLQEKALSYTMDGKAAVSRHLGRAAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|335058599|gb|AEH26489.1| Rieske domain protein [uncultured Acidobacteria bacterium A3]
Length = 400
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 30/332 (9%)
Query: 32 TPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKI 91
T P+S YT P + LE + +F R +VG++ QL++P F + V +V RD+ G +
Sbjct: 30 TVPTSRYTSPQRVELERNILFRRFPIIVGFSSQLREPGSFVTHNHTGVPILVTRDEQGGL 89
Query: 92 HAFHNVCRHHASILA-TGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL 149
+AF N CRH + L SG++ VCP+H W+Y L G L + D + +FGL
Sbjct: 90 NAFVNQCRHRGTQLTCQPSGQQLRHLVCPFHAWSYDLRGNLRAVPQAASFPDLDRTQFGL 149
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR-- 207
L VA + + A ++D+ +LG L G D Y+ R
Sbjct: 150 CRLPVAERYGMIFVTPTPGAT--MDIDT------FLGPLVPDLGYFGFD---DYVADRLH 198
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK-----VSIQRCESGS 262
E NWK+ D L+ GYH+P+ H GL+ + +Y + V +
Sbjct: 199 ETKQPFNWKLHMDATLE-GYHIPFLHSRTQGGLEFQATGPHVYLRPHARMVLPHKSMIQY 257
Query: 263 TEGTDDTHRLGSK-AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD 321
+ RLG++ A+ I+PN I + P+ C+ D
Sbjct: 258 KQMPQKFWRLGNRAAVVWMIFPNTTIFCVHGTAQVTSLFPVDAGHCQFSSTMLRQPGAVD 317
Query: 322 DKA-----FIEQSLKDSEQVQMEDIILCEGVQ 348
++ F+ +S + + ED +CE +Q
Sbjct: 318 ERVQKHLDFVHESFWTTME---EDHHVCESIQ 346
>gi|221212074|ref|ZP_03585052.1| dioxygenase alpha subunit [Burkholderia multivorans CGD1]
gi|221168159|gb|EEE00628.1| dioxygenase alpha subunit [Burkholderia multivorans CGD1]
Length = 216
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 23 PQIPI------EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI 76
PQ+P E A T P ++YT +E ++F +W V + +L D + + +
Sbjct: 15 PQLPADFCSNPELAWTIPKTYYTSQEVFKVEEEKIFADTWICVAHRSELADANQYVTREV 74
Query: 77 GEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATR 135
++ R + + AF+NVC H L GSGK K+ CPYH WT+ LDG L A
Sbjct: 75 IGENVLIVRGKDKVLRAFYNVCPHRGHQLLEGSGKAKNVITCPYHAWTFKLDGALAHANN 134
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN 195
+ F+ + LVP++V + FV +N+ A EE + G + + +
Sbjct: 135 CDHVMAFDKENASLVPVKVEEYAGFVFINLNPNAGTVEE--------QLPGMEARLRAAC 186
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLD 224
+ L R NWK DNYL+
Sbjct: 187 PVIDDLKLAARFVSETPANWKSIVDNYLE 215
>gi|172062557|ref|YP_001810208.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171995074|gb|ACB65992.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MC40-6]
Length = 427
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHDSELPNPGDFITTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ + G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCESHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCEKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + + E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASFNDDIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|242780783|ref|XP_002479667.1| Rieske 2Fe-2S family protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218719814|gb|EED19233.1| Rieske 2Fe-2S family protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 376
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 141/335 (42%), Gaps = 21/335 (6%)
Query: 46 LELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHA-SI 104
LE +F + W VV + +L + + + F + +D G I+ FHNVCRH A I
Sbjct: 4 LERRAIFSKDWIVVSHQLRLAESGKYVQLQEAGFSFFLVKDRQGNINGFHNVCRHRAYPI 63
Query: 105 LATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLN 164
+ G + C YHGW+YGL G L KA R +++F ++ GL P+ V +
Sbjct: 64 VQEKEGSANILACKYHGWSYGLSGKLAKAPRYDDLENFEKEKNGLFPIRVH------IDK 117
Query: 165 MGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGID-SSLSYLCRREYTIECNWKVFCDNY 222
+G V+ E + ++ + GG E + D S + + + + NWK+ DNY
Sbjct: 118 LGFIWVNLEASEKPTISWEDDFGGVDEQPRLLQFDLSEFQFDHQWDMVGDHNWKILADNY 177
Query: 223 LDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIY 282
+ YH H L + L Y + IQ TD R G F +
Sbjct: 178 -NKCYHCLTGHLNLVNYTDLAKYRVET-KGSYIQHF------NTDRPDRQGMGIYSTFYF 229
Query: 283 PNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKD-DKAFIEQSLKDSEQVQMEDI 341
PN I + IP + ++ + ++ + + + D D I+ K QV ED
Sbjct: 230 PNASITISKHFFYIMRSIPKSASQTLMEYEVYRNKNSSDEDFGNIDSIFK---QVLKEDK 286
Query: 342 ILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLL 376
LC Q+ L + Y +G+ E+ +F L
Sbjct: 287 DLCNAAQQNLNAVIYTNGQLHSHNEKGSLYFQDRL 321
>gi|254476041|ref|ZP_05089427.1| hypothetical protein RR11_1879 [Ruegeria sp. R11]
gi|214030284|gb|EEB71119.1| hypothetical protein RR11_1879 [Ruegeria sp. R11]
Length = 408
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 163/396 (41%), Gaps = 51/396 (12%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
++L+ P +E+A Y+DP+ A +L + YR W +L+ P + +
Sbjct: 6 RELLARRRPGHALEQAF------YSDPAVFAADLEAIHYRQWLFAIPACELEKPGSYVTH 59
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKA 133
++G V+ R + I AFHN CRH S+L T + G VCPYH WTY LDG+LL A
Sbjct: 60 KVGAYGVVIVRGSDNVIRAFHNTCRHRGSVLCTAAKGNSPKLVCPYHQWTYELDGSLLWA 119
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEA--------VHQEEVDSNVVANEWL 185
+ DF + GL + V + + +A + + ++ + +AN +
Sbjct: 120 RDMG--PDFVPADHGLKTVHCRELAGLVYICLADDAPDFDTFANIARPYLEPHDLANAKV 177
Query: 186 GGSSEILSINGIDSSLSYLCRRE-YTIECNWKVFCDNYLDG-------GYHVP---YAH- 233
S I+ NG + L + RE Y N C + D G P AH
Sbjct: 178 AFESSIIE-NG-NWKLVWENNRECYHCGGNHPSLCRTFPDDPSVTGIEGGETPAKLQAHF 235
Query: 234 -----KGLASGLQLDSYSTSLYEKVSIQR-CESGSTEGTDDTHRLGSKAIYA-------F 280
GL S L ++ + ES + +G R +A +A F
Sbjct: 236 DRCEAAGLPSAFYLHGDGQYRLARMPLNEGAESYTLDGKSAVSRWLGRAPFADAGTLLKF 295
Query: 281 IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM-- 338
YP + V P++PT +V + ++ KD ++ LK +V +
Sbjct: 296 HYPTTWNHFLADHSIVFRVTPISPTETEVTTKWLVN---KDAVEGVDYDLKRLTEVWVAT 352
Query: 339 --EDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
ED + E Q G+ SPAY G Y+P+ E + F
Sbjct: 353 NDEDRRVVEDNQHGINSPAYQPGPYSPTQESGVIQF 388
>gi|398382405|ref|ZP_10540493.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. AP16]
gi|397717570|gb|EJK78186.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. AP16]
Length = 414
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 152/373 (40%), Gaps = 42/373 (11%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W +G+ ++ ++F+ +IG+ V+ R + I AFHN
Sbjct: 24 FYTDPDYFKLDMEMIYYRDWLFIGHDCEVPRAGNYFTVQIGDYPVVIVRGRDQVIRAFHN 83
Query: 97 VCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G + VCPYH WTY L+G+LL A + +DF+ EF L P+
Sbjct: 84 SCRHRGSRVCTSERGSSAKLVCPYHQWTYELNGSLLFARHMP--EDFDKSEFSLKPVHCE 141
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSSEILSINGIDS---SLSYLCRRE- 208
+ G ++ + + +A + V + LG + I+ L + RE
Sbjct: 142 SIGGYIFICLADQAPDFAPFRAMVEPYLVRHRLGETKVAFESTIIEKGNWKLVWENNREC 201
Query: 209 YTIECNWKVFCDNY--------LDGGYHVPYAHK--------GLASGLQLDSYSTSLYEK 252
Y N C Y + G P + L S ++ +
Sbjct: 202 YHCAANHPELCRTYPEAPSATGVQGAKDDPVISEHWAKCEAANLPSEFRMSPSGQFRAAR 261
Query: 253 VS-IQRCESGSTEGTDDTHRLGSK--------AIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+ IQ ES + G R S + F YP + T V+PL
Sbjct: 262 MPLIQDAESYTMSGARAVQRPLSNDVLESHIGTLLLFHYPTTWNHVLADHAITFRVLPLG 321
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
P + +V + ++ KD ++ + + V E D + E G+ SPAY G
Sbjct: 322 PEQTQVTTKWLVN---KDAVEGVDYRIDELTHVWTETNDQDRRIVEENAFGIRSPAYQPG 378
Query: 360 RYAPSVEQTMYHF 372
Y+P E + F
Sbjct: 379 PYSPEDEGGVMQF 391
>gi|306844358|ref|ZP_07476949.1| biphenyl dioxygenase subunit alpha [Brucella inopinata BO1]
gi|306275294|gb|EFM57041.1| biphenyl dioxygenase subunit alpha [Brucella inopinata BO1]
Length = 415
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG +V RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIVVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL P
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKPAHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|239832340|ref|ZP_04680669.1| Biphenyl dioxygenase subunit alpha [Ochrobactrum intermedium LMG
3301]
gi|444310494|ref|ZP_21146115.1| Rieske (2Fe-2S) domain-containing protein [Ochrobactrum intermedium
M86]
gi|239824607|gb|EEQ96175.1| Biphenyl dioxygenase subunit alpha [Ochrobactrum intermedium LMG
3301]
gi|443486056|gb|ELT48837.1| Rieske (2Fe-2S) domain-containing protein [Ochrobactrum intermedium
M86]
Length = 415
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+YTDP + +L +FY+ W VG+ +L + + +IG V+ RD G I AF
Sbjct: 22 QKFYTDPEYYKQDLENIFYKDWLFVGHYCELPKTGSYMTVQIGAYPVVIVRDAQGGIRAF 81
Query: 95 HNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HN CRH S I A G + VCPYH WTY LDG LL A ++ DF E+GL P+
Sbjct: 82 HNSCRHRGSRICAAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPAEYGLKPVH 139
Query: 154 VATWGPFVLLNMGKEA 169
T ++ + + EA
Sbjct: 140 CETVAGYIYVCVADEA 155
>gi|289755281|ref|ZP_06514659.1| dioxygenase [Mycobacterium tuberculosis EAS054]
gi|289695868|gb|EFD63297.1| dioxygenase [Mycobacterium tuberculosis EAS054]
Length = 382
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQL D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQLAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGARHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKEA 169
L VATW V +N+ +A
Sbjct: 147 LPQFAVATWNGLVWINLDADA 167
>gi|148557046|ref|YP_001264628.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502236|gb|ABQ70490.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 384
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 31/365 (8%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E A P Y DP+ E R+F R W + + D+ + + +V R
Sbjct: 16 PLETAQWMPKRMYLDPAVFERERERIFKREWLYAAHVGAVARAGDYVALTVVGEPVLVVR 75
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
+G I AF NVC+H A +A+G+G FVCPYH W Y G L A + + F+
Sbjct: 76 GKDGLIRAFFNVCKHRAMAVASGAGNAPAFVCPYHAWNYDTTGQLQVAPGMGKAEGFDPC 135
Query: 146 EFGLVPL--EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
L + E+ F+ + E + + D + + W G+ E +
Sbjct: 136 AVRLTEIRHEIVNGMIFINFDADAEPLAAKIPDLIELISPWDIGAMEPVH---------- 185
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTS----------LYEKV 253
R E + NWKV +N + YH H+ + +S S LY
Sbjct: 186 --RSEIEGDYNWKVMLEN-ANENYHTIAVHRDSFHAISPAEHSYSSDGRGRNWHDLYTPY 242
Query: 254 SIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDY 313
+ G + + ++P F+++ + T + +A + + V+
Sbjct: 243 TGPEPMVAGPRIAGVPEWAGQRLSFFALHPQFLMSVSEDSVSTYVTEIVAHRKTRFVWTM 302
Query: 314 FLDGSLKDDKAFIEQSLKDS----EQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
++ KD E + D +++ ED+++C GVQ GLES + R++ +E+ +
Sbjct: 303 YMMNGAKDQPGAAEH-IADMGAWIDRINSEDLVICRGVQAGLESDGWEPTRFS-HLEKPI 360
Query: 370 YHFHS 374
+ F +
Sbjct: 361 WQFQN 365
>gi|404445340|ref|ZP_11010482.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vaccae
ATCC 25954]
gi|403652401|gb|EJZ07455.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vaccae
ATCC 25954]
Length = 447
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 18/231 (7%)
Query: 31 LTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGK 90
+T P+ YT P++ A E ++ R+WQ+ G + L P D+ I + F++ R + K
Sbjct: 21 MTIPTDRYTCPTYAAREREAIWTRTWQIAGRAEDLPKPGDWKRYEILDQSFIIVRGKDEK 80
Query: 91 IHAFHNVCRHHASIL---ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ F N CRH + L TG+ K+ F+C YH W+Y LDG L R + E
Sbjct: 81 LRGFVNACRHRGNALCTTETGNAKRG-FLCQYHLWSYDLDGRLKGLLRENLAGPIDKTEN 139
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGS-SEILSINGIDSSLSYLCR 206
L+ + V T+ F+ LN EA +E+LG +L I+ + +
Sbjct: 140 SLLQVSVDTFAGFIFLNPDPEAAP---------LHEYLGDDVVSLLEPYNIEQFTTVMDV 190
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST--SLYEKVSI 255
E IECNWKV D + + GYH+ H L L ++ + +EK S+
Sbjct: 191 TE-AIECNWKVVMDAF-EEGYHINGIHPQLLQVLHINPKTARYRFFEKHSV 239
>gi|254775424|ref|ZP_05216940.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 450
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 25/240 (10%)
Query: 25 IPIEKAL-TP---PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
+P+ A+ TP P Y DP F ALE + R WQ+ +++ P DF I +
Sbjct: 6 VPVPWAVQTPDRIPKQRYYDPEFYALEKEMFWPRVWQMACRLEEIPKPGDFVEYEILDES 65
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITG 138
+V R D+ + A+HN CRH L G+G + FVCP+HGW + LDG T +
Sbjct: 66 VIVVRLDSQTVRAYHNACRHRGVKLVEGNGNRRTFVCPFHGWCWSLDGRNTFVLRPETFA 125
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGID 198
++ + LV + WG +N+ +A +W+ + ++
Sbjct: 126 QENLAAADLRLVSVRCELWGGCAWINLDDDA---------PALRDWMEPFASTYDAWWVE 176
Query: 199 SSLSYLCRREYTIEC----NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
S R E+ C NWK+ +++ GYHVP H L G Q S +++ V+
Sbjct: 177 S-----LRVEWWQSCRLPVNWKLATAAFME-GYHVPQTHPQLLPGAQTGEPSAAVHPVVA 230
>gi|222085085|ref|YP_002543615.1| ring hydroxylating dioxygenase subunit alpha [Agrobacterium
radiobacter K84]
gi|221722533|gb|ACM25689.1| ring hydroxylating dioxygenase alpha-subunit [Agrobacterium
radiobacter K84]
Length = 395
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 152/373 (40%), Gaps = 42/373 (11%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W +G+ ++ ++F+ +IG+ V+ R + I AFHN
Sbjct: 5 FYTDPDYFKLDMEMIYYRDWLFIGHDCEVPRAGNYFTVQIGDYPVVIVRGRDQVIRAFHN 64
Query: 97 VCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + T G + VCPYH WTY L+G+LL A + +DF+ EF L P+
Sbjct: 65 SCRHRGSRVCTSERGSSAKLVCPYHQWTYELNGSLLFARHMP--EDFDKSEFSLKPVHCE 122
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSSEILSINGIDS---SLSYLCRRE- 208
+ G ++ + + +A + V + LG + I+ L + RE
Sbjct: 123 SVGGYIFICLADQAPDFAPFRAMVEPYLVRHRLGETKVAFESTIIEKGNWKLVWENNREC 182
Query: 209 YTIECNWKVFCDNY--------LDGGYHVPYAHK--------GLASGLQLDSYSTSLYEK 252
Y N C Y + G P + L S ++ +
Sbjct: 183 YHCAANHPELCRTYPEAPSATGVQGAKDDPVISEHWAKCEAANLPSEFRMSPSGQFRAAR 242
Query: 253 VS-IQRCESGSTEGTDDTHRLGSK--------AIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+ IQ ES + G R S + F YP + T V+PL
Sbjct: 243 MPLIQDAESYTMSGARAVQRPLSNDVLESHIGTLLLFHYPTTWNHVLADHAITFRVLPLG 302
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
P + +V + ++ KD ++ + + V E D + E G+ SPAY G
Sbjct: 303 PEQTQVTTKWLVN---KDAVEGVDYRIDELTHVWTETNDQDRRIVEENAFGIRSPAYQPG 359
Query: 360 RYAPSVEQTMYHF 372
Y+P E + F
Sbjct: 360 PYSPEDEGGVMQF 372
>gi|31794338|ref|NP_856831.1| dioxygenase [Mycobacterium bovis AF2122/97]
gi|121639045|ref|YP_979269.1| dioxygenase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991537|ref|YP_002646226.1| dioxygenase [Mycobacterium bovis BCG str. Tokyo 172]
gi|289448842|ref|ZP_06438586.1| dioxygenase [Mycobacterium tuberculosis CPHL_A]
gi|289575874|ref|ZP_06456101.1| dioxygenase [Mycobacterium tuberculosis K85]
gi|289746974|ref|ZP_06506352.1| dioxygenase [Mycobacterium tuberculosis 02_1987]
gi|294995514|ref|ZP_06801205.1| putative dioxygenase [Mycobacterium tuberculosis 210]
gi|298526636|ref|ZP_07014045.1| hypothetical dioxygenase [Mycobacterium tuberculosis 94_M4241A]
gi|339633169|ref|YP_004724811.1| dioxygenase [Mycobacterium africanum GM041182]
gi|378772903|ref|YP_005172636.1| putative dioxygenase [Mycobacterium bovis BCG str. Mexico]
gi|385992411|ref|YP_005910709.1| putative dioxygenase [Mycobacterium tuberculosis CCDC5180]
gi|385996041|ref|YP_005914339.1| putative dioxygenase [Mycobacterium tuberculosis CCDC5079]
gi|424803338|ref|ZP_18228769.1| dioxygenase [Mycobacterium tuberculosis W-148]
gi|424948793|ref|ZP_18364489.1| dioxygenase [Mycobacterium tuberculosis NCGM2209]
gi|449065256|ref|YP_007432339.1| dioxygenase [Mycobacterium bovis BCG str. Korea 1168P]
gi|31619934|emb|CAD95278.1| POSSIBLE DIOXYGENASE [Mycobacterium bovis AF2122/97]
gi|121494693|emb|CAL73174.1| Possible dioxygenase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774652|dbj|BAH27458.1| putative dioxygenase [Mycobacterium bovis BCG str. Tokyo 172]
gi|289421800|gb|EFD19001.1| dioxygenase [Mycobacterium tuberculosis CPHL_A]
gi|289540305|gb|EFD44883.1| dioxygenase [Mycobacterium tuberculosis K85]
gi|289687502|gb|EFD54990.1| dioxygenase [Mycobacterium tuberculosis 02_1987]
gi|298496430|gb|EFI31724.1| hypothetical dioxygenase [Mycobacterium tuberculosis 94_M4241A]
gi|326902614|gb|EGE49547.1| dioxygenase [Mycobacterium tuberculosis W-148]
gi|339295995|gb|AEJ48106.1| putative dioxygenase [Mycobacterium tuberculosis CCDC5079]
gi|339299604|gb|AEJ51714.1| putative dioxygenase [Mycobacterium tuberculosis CCDC5180]
gi|339332525|emb|CCC28240.1| putative dioxygenase [Mycobacterium africanum GM041182]
gi|341603084|emb|CCC65762.1| possible dioxygenase [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356595224|gb|AET20453.1| Putative dioxygenase [Mycobacterium bovis BCG str. Mexico]
gi|358233308|dbj|GAA46800.1| dioxygenase [Mycobacterium tuberculosis NCGM2209]
gi|449033764|gb|AGE69191.1| dioxygenase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 382
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQL D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQLAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKEA 169
L VATW V +N+ +A
Sbjct: 147 LPQFAVATWNGLVWINLDADA 167
>gi|170736282|ref|YP_001777542.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169818470|gb|ACA93052.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 427
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHDSELPNPGDFITTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + +A+ E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASF-NDAIEPLE--------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|407787570|ref|ZP_11134710.1| aromatic-ring-hydroxylating dioxygenase, alpha subunit
[Celeribacter baekdonensis B30]
gi|407199270|gb|EKE69290.1| aromatic-ring-hydroxylating dioxygenase, alpha subunit
[Celeribacter baekdonensis B30]
Length = 425
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ Y DP E+ ++F +W + + + D F +G +V RD GKIH
Sbjct: 24 TAMYEDPDLFDEEMEKIFKNTWVWIAHESEFPDKGSFKLSNVGLEPVIVVRDRKGKIHCM 83
Query: 95 HNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTL--LKATRITGIKDFNVKEFGLVP 151
N CRH A++ GK S F CPYHGW YGLDG+L L G DF+ + GL+
Sbjct: 84 VNRCRHRAATVCEVKKGKTSSFQCPYHGWGYGLDGSLRALPYPEQYG-DDFDKAQHGLLK 142
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
L ++ V ++ EE V ++ G + L ++T+
Sbjct: 143 LRTESYNGMVFATFKEDMEPLEEFLGEAVCR-----YIDLFMKQGGGFPVKVLGEHQFTV 197
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE 251
NWKV +N D YH P HK LD + +++
Sbjct: 198 PMNWKVQLENTTD-AYHFPVVHKSFMQ--TLDGQTEEMFD 234
>gi|254249021|ref|ZP_04942341.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124875522|gb|EAY65512.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 427
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHDSELPNPGDFVTTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + +A+ E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASF-NDAIESLE--------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|289444727|ref|ZP_06434471.1| dioxygenase [Mycobacterium tuberculosis T46]
gi|289571375|ref|ZP_06451602.1| dioxygenase [Mycobacterium tuberculosis T17]
gi|289751841|ref|ZP_06511219.1| dioxygenase [Mycobacterium tuberculosis T92]
gi|289417646|gb|EFD14886.1| dioxygenase [Mycobacterium tuberculosis T46]
gi|289545129|gb|EFD48777.1| dioxygenase [Mycobacterium tuberculosis T17]
gi|289692428|gb|EFD59857.1| dioxygenase [Mycobacterium tuberculosis T92]
Length = 382
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQL D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQLAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKEA 169
L VATW V +N+ +A
Sbjct: 147 LPQFAVATWNGLVWINLDADA 167
>gi|387889120|ref|YP_006319418.1| benzoate 1,2-dioxygenase subunit alpha [Escherichia blattae DSM
4481]
gi|414595150|ref|ZP_11444780.1| 3-phenylpropionate/cinnamic acid dioxygenase alpha subunit
[Escherichia blattae NBRC 105725]
gi|386923953|gb|AFJ46907.1| benzoate 1,2-dioxygenase alpha subunit [Escherichia blattae DSM
4481]
gi|403193923|dbj|GAB82432.1| 3-phenylpropionate/cinnamic acid dioxygenase alpha subunit
[Escherichia blattae NBRC 105725]
Length = 451
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
+TDP LE+ +F +W + + Q+ +P D+++ +G ++ RD G++HA N
Sbjct: 36 FTDPELFELEMKHLFEGNWVYLAHESQIPEPGDYYTLTVGRQPVMITRDKEGQLHALINS 95
Query: 98 CRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKAT-RITG-----IKDFNVKEFGLV 150
C H ++LA+ +G KS F CP+HGWT+ +G LLKA TG K + +
Sbjct: 96 CSHRGAMLASRKAGNKSSFTCPFHGWTFSNNGKLLKAKDEKTGGYPPCFKQDGSHDLKAM 155
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS--INGIDSSLSYLC-RR 207
P ++ F+ ++ +E E E+LG + +L ++ L L
Sbjct: 156 P-RFTSYKGFLFGSLREEVAPLE---------EYLGDTLRVLDLIVDQAPEGLEVLSGAS 205
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQ--RCESGSTEG 265
YT E NWK+ +N D GYHV H AS + +Y + V +G G
Sbjct: 206 TYTYEGNWKLGMENGAD-GYHVSVVHWNYASTMSRRNYEANATHAVDANGWSKSTGGVYG 264
Query: 266 TDDTHRL 272
D+ H L
Sbjct: 265 FDNGHML 271
>gi|385676150|ref|ZP_10050078.1| ring-cleavage dioxygenase large subunit [Amycolatopsis sp. ATCC
39116]
Length = 425
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP E+ ++F R+W V + +L P F S +G +V RD G +H N
Sbjct: 24 YTDPEIFEQEMTKIFERTWVWVAHESELPGPGTFKSTYVGRQPVIVSRDRKGTLHTLLNR 83
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF-NVKEFGLVPLEVA 155
CRH AS+ GK + F CPYH W+YGLDGTL G + + K+ L L
Sbjct: 84 CRHRGASLCEKPRGKANGFTCPYHAWSYGLDGTLRGIPYPDGYEGVADKKDLSLRKLRTE 143
Query: 156 TWGP--FVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
++G F + G E + D+ + WL + G + L + ++
Sbjct: 144 SYGGMVFATFDEGIEPLADFLGDAKL----WL----DRFMKQGGGYPIKVLGKHQFRFRG 195
Query: 214 NWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D GYH P H+
Sbjct: 196 NWKIQLENTTD-GYHFPIVHR 215
>gi|425734594|ref|ZP_18852912.1| Rieske (2Fe-2S) domain-containing protein [Brevibacterium casei
S18]
gi|425481208|gb|EKU48369.1| Rieske (2Fe-2S) domain-containing protein [Brevibacterium casei
S18]
Length = 444
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 170/400 (42%), Gaps = 64/400 (16%)
Query: 15 QKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG 74
+L+ E P +E + +YT P F A ++ +F +W VG ++ +P DF +
Sbjct: 34 DELIDERRPGYSLE------APFYTSPDFFARDVEAIFASTWIFVGSVAEVPEPGDFVTI 87
Query: 75 RIGEVEFVVCRDDNGKIHAFHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKA 133
IG +V RDD+G+I HNVCRH + +L+ +G VC YH WTY G L+ A
Sbjct: 88 DIGTYSVIVIRDDDGEIRVHHNVCRHRGTRLLSDLAGSVGNIVCSYHQWTYTPRGELISA 147
Query: 134 TRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSSE 190
F+ F L + V T + + +G E +EV + +A + G+
Sbjct: 148 G--AQAPGFDPACFSLRSVSVRTIAGLIFVCLGPEPDDIDEVADVIAPYIAPHDIAGAKV 205
Query: 191 ILSINGIDSSLSYLCRREYTIEC------NWKVFCDNYLDGGY---HVPY---------- 231
++ I+ S ++ E EC + ++ C + GY +P
Sbjct: 206 AAQVDLIEDS-NWKLVMENNRECYHCEAGHPELTCTFFPTYGYAPEEIPPRLQPAYQRFL 264
Query: 232 -AHKGLASGLQLDSYSTSLYEKVS-------IQRC------ESGSTEGTD---------D 268
A + L + +L E++S I+R ES + +G+ D
Sbjct: 265 DAERRLHDDCDRNGLPFALVEELSGRPTGFRIERAALDGHGESYTMDGSAASARLLGDLD 324
Query: 269 THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQ 328
T LG +++ + PN + + T ++PLA R V + +D ++ ++
Sbjct: 325 TFSLGRASLH--VQPNMWFHAMADHIVTFSLVPLAADRTLVRTTWLVDAEAEEG---VDY 379
Query: 329 SLKDSEQVQM----EDIILCEGVQRGLESPAYCSGRYAPS 364
L++ V M +D CE Q G+ SPAY G YAP+
Sbjct: 380 DLENLTTVWMKTNEQDAAFCERGQLGVSSPAYLPGPYAPT 419
>gi|116691718|ref|YP_837251.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|116649718|gb|ABK10358.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
Length = 427
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHDSELPNPGDFVTTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + +A+ E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASF-NDAIEPLE--------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|421477806|ref|ZP_15925597.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia multivorans CF2]
gi|400225846|gb|EJO55980.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia multivorans CF2]
Length = 427
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP+ EL R+FYR+W V + +L P DF + IG +V RD G+++ N
Sbjct: 28 YHDPALFEAELDRIFYRTWIWVAHDSELPRPGDFITTTIGRQPVIVVRDKTGEVNVLQNR 87
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLEVA 155
CRH A++ G F CPYH W+Y LDGTL G + K + LV L V
Sbjct: 88 CRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLRVG 147
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYTIE 212
+ + + E E ++LGG+ ++ G + ++ +
Sbjct: 148 VYQGLIFASFNDEIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFRFK 198
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
NWK+ +N D YH P HK + ++ +T
Sbjct: 199 GNWKIQLENTTD-LYHFPVVHKSWMKSIDDETAAT 232
>gi|392416910|ref|YP_006453515.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium chubuense NBB4]
gi|390616686|gb|AFM17836.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium chubuense NBB4]
Length = 373
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 144/359 (40%), Gaps = 28/359 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++YT A E +F W + L F ++G ++ R +G + AF
Sbjct: 11 AYYTSADVFAAEQEHIFESMWFCAARSADLSLAGKFKKVQVGRESVLLIRGRDGLLRAFL 70
Query: 96 NVCRHHASILATGSGK--KSWFVCPYHGWTYGLDGTLLKATRITGIKD-----FNVKEFG 148
NVCRH + L T S K CPYH WTY LDG L+ A + + D + +G
Sbjct: 71 NVCRHRGAQLCTESDGEVKRTLRCPYHSWTYALDGRLVAAPNLGALTDDAGTPIDRYTYG 130
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI--LSINGIDSSLSYLCR 206
LVP+ + W + + + ++V + LG S I I G+D R
Sbjct: 131 LVPVALTEWLGYAWVCLADAPPPFDDVVAGAAGT--LGDSDAINRYGIGGLDVGR----R 184
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKV-SIQRCESG---- 261
Y + NWK+ +N+++ YH H L L S + S + SG
Sbjct: 185 VVYEVAANWKLIVENFME-CYHCSSIHPELVGVLPEFSRGIAAQANTGSGAQFGSGIAGF 243
Query: 262 STEGTDDTHRL------GSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+ +GT RL + YA + P IN + + + P+A R V D+
Sbjct: 244 TVDGTAGFDRLPGITDDQDRRYYAITVKPTVFINLVPDHVIFHRMYPVAADRTVVECDWL 303
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
G++ + I S++ +V ++D CE Q + S AY G E + FH
Sbjct: 304 YTGAVLSSEEDISASVELFHRVNLQDFAACERTQPAMSSRAYRDGGVLVPAEHHLAEFH 362
>gi|418403383|ref|ZP_12976874.1| Rieske (2Fe-2S) domain-containing protein [Sinorhizobium meliloti
CCNWSX0020]
gi|359502690|gb|EHK75261.1| Rieske (2Fe-2S) domain-containing protein [Sinorhizobium meliloti
CCNWSX0020]
Length = 414
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 156/374 (41%), Gaps = 42/374 (11%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP + +L +++Y+ W +G+ ++ P ++F+ ++G+ V+ RD G + A H
Sbjct: 23 AFYVDPDYYRQDLEQIWYKDWLFIGHDCEVPRPGNYFTAQVGDYPVVIVRDRQGAVRALH 82
Query: 96 NVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S + T G + VCPYH WTY LDG LL A ++ + F+ E L P+
Sbjct: 83 NSCRHRGSRVCTQHKGSSAKLVCPYHQWTYELDGRLLFARQMP--EGFDPAEHSLKPIHC 140
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSS---EILSINGIDSSLSYLCRRE 208
T G ++ +++ + + V +A LG + E + + L + RE
Sbjct: 141 ETVGGYIFISLAEHPMDFRPFRETVAAYLAPHRLGETKVAFESTIVEKGNWKLVWENNRE 200
Query: 209 -YTIECNWKVFCDNY--------LDGGYHVPY--AH------KGLASGLQLDSYSTSLYE 251
Y N C Y + G + P AH GL S ++
Sbjct: 201 CYHCAANHPELCRTYPEAPTVTGVQGAMNDPEIGAHWQKCEAAGLPSAFKIAPTGQFRMT 260
Query: 252 KVS-IQRCESGSTEGTDDTHRLGSKAIYA--------FIYPNFMINRYGPWMDTNLVIPL 302
++ I ES + G + S + A F YP + G T V+PL
Sbjct: 261 RMPLINGAESYTMSGQKAVRKQLSTGVDADGIGTLLLFHYPTTWNHILGDHAITFRVLPL 320
Query: 303 APTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCS 358
P +V + ++ KD ++ ++ + V E D + E G+ SPAY
Sbjct: 321 GPELTEVTTKWLVN---KDAVEGVDYTIDELTHVWTETNDQDRQIVEENAFGIRSPAYEP 377
Query: 359 GRYAPSVEQTMYHF 372
G Y+ E + F
Sbjct: 378 GPYSAEHEGGVMQF 391
>gi|170699864|ref|ZP_02890895.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|170135246|gb|EDT03543.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
Length = 427
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHDSELPNPGDFITTTIGRQPVIVVRDKAGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ + G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCESHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCEKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + + E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASFNDDIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|433616576|ref|YP_007193371.1| Phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenase, large terminal subunit [Sinorhizobium
meliloti GR4]
gi|429554823|gb|AGA09772.1| Phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenase, large terminal subunit [Sinorhizobium
meliloti GR4]
Length = 412
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 159/390 (40%), Gaps = 76/390 (19%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y P AL+L +FY+ W QL + + R+G E V+ R +G++ AFHN
Sbjct: 25 FYVSPEVYALDLQHIFYKQWLYAVPVCQLAKAGSYTTLRVGAYEVVIVRGRDGEVRAFHN 84
Query: 97 VCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S++ G+ + VCPYH WTY LDG L+ A + DF+ ++GL P+ +
Sbjct: 85 SCRHRGSLICKARQGQVAKLVCPYHQWTYELDGKLIWANDMG--PDFDASKYGLKPVNLR 142
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGI-DSSLSYLCRREYTI--E 212
+ + + D+ + + L ++ + D+ +++ TI +
Sbjct: 143 NLDGLIYICLS---------DTPPDFQTFAQLARPYLEVHDLKDAKVAFTS----TIIEK 189
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE--------KVSIQRCESGSTE 264
NWK+ +N + YH H L LD + + RCE+ T
Sbjct: 190 GNWKLVWENNRE-CYHCSSNHPALCRSFPLDPEVAGVQADGGVSKKLQAHFDRCEAAGTP 248
Query: 265 GT-----DDTHRLG------------------------------SKAIYAFIYPNFMINR 289
D +RL + + F YP+ N
Sbjct: 249 AQFVLAGDGQYRLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPS-TWNH 307
Query: 290 YGPWMDTNL---VIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDII 342
+ P D +L V+P++PT +V + + KD ++ LK +V + ED
Sbjct: 308 FLP--DHSLTFRVMPISPTETEVTTTWLVH---KDAVEGVDYDLKRLTEVWIATNDEDRE 362
Query: 343 LCEGVQRGLESPAYCSGRYAPSVEQTMYHF 372
+ E Q+G+ SPAY G Y+P E + F
Sbjct: 363 IVETNQQGILSPAYVPGPYSPGQESGVMQF 392
>gi|422806351|ref|ZP_16854783.1| Rieske domain-containing protein [Escherichia fergusonii B253]
gi|424815587|ref|ZP_18240738.1| Ring hydroxylating dioxygenase, alpha subunit:Rieske [2Fe-2S]
region [Escherichia fergusonii ECD227]
gi|324112889|gb|EGC06865.1| Rieske domain-containing protein [Escherichia fergusonii B253]
gi|325496607|gb|EGC94466.1| Ring hydroxylating dioxygenase, alpha subunit:Rieske [2Fe-2S]
region [Escherichia fergusonii ECD227]
Length = 433
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+S Y + LEL R+F ++W V +T ++ D F + IG +V RD G +H
Sbjct: 33 TSLYNSETLFNLELDRIFSKTWVWVAHTSEIPDTGSFKTTEIGTQPVIVVRDRKGNVHTL 92
Query: 95 HNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPL 152
N CRH A+ + +GK + FVCPYHGW Y LDG+L D E GLV L
Sbjct: 93 LNRCRHRAATVCEHRTGKTNSFVCPYHGWGYALDGSLRGVPHPESYADQLEKGELGLVSL 152
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ + + H E ++ + A +W+ ++ G + +
Sbjct: 153 RTEQYAGMIFATFNE---HIEPLEDFLGAAKKWM----DLFMKQGAGYPIKTGPAHRFRF 205
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N D GYH P H+ S +
Sbjct: 206 PGNWKIQLENTTD-GYHFPVVHRSFLSSV 233
>gi|399543476|ref|YP_006556784.1| dioxygenase subunit alpha yeaW [Marinobacter sp. BSs20148]
gi|399158808|gb|AFP29371.1| Putative dioxygenase subunit alpha yeaW [Marinobacter sp. BSs20148]
Length = 428
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P + Y D S L++ +F + W G T ++ + + +G +V RD+ G +
Sbjct: 34 PQALYNDASMFKLDIEEIFEKEWIFAGMTCEIPTRGSYITVEVGSNSVIVMRDNTGAVQG 93
Query: 94 FHNVCRHHASIL-ATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHNVCRH S L + GK + VCPYH WTY LDG LL A G F+ ++ L P+
Sbjct: 94 FHNVCRHRGSRLCSKAKGKVAKLVCPYHQWTYELDGRLLYAGNNMG-HAFDPSDYSLKPV 152
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
+V T G F+L+ + ++ VD + LG E + + + +
Sbjct: 153 QVKTGGGFILICLAEDP---PAVDDLLFT---LGEYLEPYDMENVKVA----AESTLVEQ 202
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
NWK+ +N + YH AH L + LQ
Sbjct: 203 ANWKLVVENNRE-CYHCNGAHPELLNSLQ 230
>gi|302547584|ref|ZP_07299926.1| ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein [Streptomyces hygroscopicus ATCC 53653]
gi|302465202|gb|EFL28295.1| ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein [Streptomyces himastatinicus ATCC 53653]
Length = 431
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 14/237 (5%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S YTDP LE+ R+F R+W V + ++ + DF + +G +V RD G I+
Sbjct: 30 SLYTDPELFELEMDRIFNRTWVWVAHESEIPNAGDFRTSMVGRQPVIVTRDRRGGINVLL 89
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLE 153
N CRH AS+ G + F CPYH W+Y LDG L G +D K+F L L+
Sbjct: 90 NRCRHRGASLCEAPRGNANGFTCPYHAWSYALDGKLRGIPYPDGYEDVLEKKDFPLHRLK 149
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
V ++ + + + + D A W+ ++ G + ++
Sbjct: 150 VDSYAGMIFASFNPDV--EPLADFLGPARHWM----DLFMKQGAGFPVKVQGEHKFRFNG 203
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
NWK+ +N D GYH P H+ S S + E +S E T + H
Sbjct: 204 NWKIQLENTTD-GYHFPIVHRSWMS-----SVDSETAEMLSFMTDEKAVTHSLGNGH 254
>gi|392415110|ref|YP_006451715.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium chubuense NBB4]
gi|390614886|gb|AFM16036.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium chubuense NBB4]
Length = 389
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 31/341 (9%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E L P +Y DP +E + R+ + + QL D+ + +V RD
Sbjct: 32 ESVLRVPLHYYRDPKITEIEESAILRRTPLAIVPSSQLPHAHDYLVRSVLGDSLLVTRDA 91
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+G+ H F N CRH ++ A GSG FVCPYH W Y G L++ G ++ +
Sbjct: 92 DGRAHVFLNYCRHRGAMPACGSGNTRRFVCPYHAWNYDSAGRLVRIPGRAGFAGTDLSAY 151
Query: 148 GLVPLEVATWGPFV--LLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
GLV L FV +L G E+D + ++ ++E+ + SS Y
Sbjct: 152 GLVELPNEERFGFVWAVLTAGS------EIDLDAHLGDF---AAELQQWDY--SSYGYHD 200
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEK--------VSIQR 257
RE+ E +WK + + + GYH P+ H GL + +T +Y++
Sbjct: 201 DREFESETSWKGALEAFAE-GYHFPFVHGQSVIGLNTVA-NTHVYDEWGRHHRIGFPFNN 258
Query: 258 CESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPL-APTRCKVVFDYFLD 316
+ +D L + ++YPN ++ ++ ++P APTRC V +
Sbjct: 259 IADLNDNPAEDWSPLARMGVIYWVYPNLILANSPVGVEVIDILPAGAPTRCTVRHSWMAR 318
Query: 317 GSLKDD--KAFIEQSLKD-SEQVQMEDIILC----EGVQRG 350
DD + F ++ + V+ ED ++ EGV+ G
Sbjct: 319 YPATDDAQRVFYDEVYRQVHAAVRDEDFVMLPQCGEGVRHG 359
>gi|1841362|dbj|BAA12807.1| large subunit of terminal dioxygenase [Pseudomonas putida]
Length = 448
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTD + + E++ +F +W + + ++ +P DF IG E +V RD+ G I F N
Sbjct: 34 YTDEAIFSREMNNIFAATWVYLAHESEIPEPNDFKQAWIGVREVIVARDEEGVIRVFSNR 93
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFNVKEFGLV-PLEV 154
C H AS+ G + F CPYHGW + G L F ++ L P +V
Sbjct: 94 CSHRGASVCREHRGNAAGFTCPYHGWRFDNRGQLFGIPGKNAYGPTFKSRDMHLARPAQV 153
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVA--NEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
A++ FV + +A E N + W + NG +L + + +
Sbjct: 154 ASYKGFVFATLNPDAPSLAEHLGNAAPYLDAW-------IDHNGGPENLRLAGAQRFRLA 206
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGL 236
CNWK+ DN D GYHVP++H+ L
Sbjct: 207 CNWKLVWDNAGD-GYHVPFSHQSL 229
>gi|319779875|ref|YP_004139351.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165763|gb|ADV09301.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 409
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 20/254 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP+ ++ RVF R W + + + +P DF ++G+ ++ R +G +HA
Sbjct: 32 AFYHDPAIFERDMERVFRRHWHCLAHASVIPNPGDFELFKLGDEAVILTRGMDGTVHAML 91
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
NVCRH A + G FVCPYH WTY DG+ L+A R+ KDF+ GL L V
Sbjct: 92 NVCRHRGAEVCTKQKGNAKMFVCPYHAWTYSNDGS-LRAARLMP-KDFDRTAHGLKKLHV 149
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECN 214
V ++ + + + ++ ++ + G D+ ++Y R+ Y ++ N
Sbjct: 150 RVASGLVFISFAETPLDFDPIEQSLRTSCGQYGWG--------DAKVAY--RQSYPLDAN 199
Query: 215 WKVFCDNYLD----GGYHVPYA--HKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
WK+ +NY++ G H Y+ H ++ + ++ ++ E GS +
Sbjct: 200 WKLAVENYVECYHCGPAHPEYSQTHALEKPAEMIEQLNAAMEQRTCALGIEIGSANRWQN 259
Query: 269 THRLGSKAIYAFIY 282
+ G +AI+ F Y
Sbjct: 260 S-AAGQEAIHTFRY 272
>gi|145223669|ref|YP_001134347.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|315443995|ref|YP_004076874.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium gilvum Spyr1]
gi|145216155|gb|ABP45559.1| Rieske (2Fe-2S) domain protein [Mycobacterium gilvum PYR-GCK]
gi|315262298|gb|ADT99039.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium gilvum Spyr1]
Length = 373
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 146/368 (39%), Gaps = 30/368 (8%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YT A E +F W T L+ P F ++G ++ R +G + AF N
Sbjct: 12 YYTSAEVFAAEQQGIFENMWFCAVRTSDLEKPGKFTKVQVGRESVLLVRGRDGLLRAFLN 71
Query: 97 VCRHHASILATGSGK--KSWFVCPYHGWTYGLDGTLLKATRITGIKD-----FNVKEFGL 149
VCRH + L + S + CPYH WTY LDG L+ A I + D + +GL
Sbjct: 72 VCRHRGAQLCSESEGEVRRTLRCPYHSWTYALDGKLVAAPNIGTLTDDAGSPIDRYRYGL 131
Query: 150 VPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI--LSINGIDSSLSYLCRR 207
+P+ + W + + + E+V + A LG + I I G+D R
Sbjct: 132 IPVALTEWLGYAWVCLSDTPPPFEDVVAE--ATRTLGDADAINRYGIGGLDVGH----RV 185
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGS----- 262
Y + NWK+ +N+++ YH H L L + + + + E GS
Sbjct: 186 VYEVAANWKLIVENFME-CYHCSSIHPELVDVLPEFAKGQAAQANIGLG-AEFGSEVAGF 243
Query: 263 -TEGTDDTHRLGSKA------IYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+G RL A YA + P IN + + + P+A R V D+
Sbjct: 244 TVDGGAGFERLPGIADDQDRRYYAITVKPTVFINLVPDHVIFHRMYPVAADRTVVECDWL 303
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ + +S++ +V M+D CE Q + S AY SG E + FH
Sbjct: 304 YTREVLGSGRDVSRSVELFHRVNMQDFDACERTQPAMSSRAYRSGGVLVPAEHHLAEFHR 363
Query: 375 LLHCNLTN 382
+ L
Sbjct: 364 WVVSRLAT 371
>gi|410447595|ref|ZP_11301687.1| ring hydroxylating alpha subunit, catalytic domain protein [SAR86
cluster bacterium SAR86E]
gi|409979175|gb|EKO35937.1| ring hydroxylating alpha subunit, catalytic domain protein [SAR86
cluster bacterium SAR86E]
Length = 384
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 136/317 (42%), Gaps = 50/317 (15%)
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK 140
+V RD+ G+++AF N CRH +A+GSG K FVCPYHGWTYGL G G
Sbjct: 91 ILVTRDEEGEVNAFINACRHRGMQVASGSGCKKSFVCPYHGWTYGLKGENRNIPGSDGFP 150
Query: 141 DFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSS 200
+ E GL P+ A G V + E +S N +D +
Sbjct: 151 GIDPLEHGLKPVNAAEIGGIVYVCQDGE-----------------------ISKNFLDEA 187
Query: 201 LSYLCRREYTI-------ECNWKVFCDNYLDGGYHVPYAHK------GLASGLQLDSYST 247
L Y + I E NWK+ + L+ GYH+ HK GL + +++Y
Sbjct: 188 LDYFADDQALINQSEIEDEANWKILHETLLE-GYHIKTLHKDTFFPYGLDNINVVENYGQ 246
Query: 248 SLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAF--IYPNFMINRYGPWMDTNLVI--PLA 303
+ +R E + R+ I + ++PN I+ TNLVI P++
Sbjct: 247 NSRVIFPFRRIE--KLREVEPGSRVIDGTITSVYSLFPNTSISVLS--KHTNLVILEPIS 302
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQV----QMEDIILCEGVQRGLESPAYCSG 359
P+R K V ++ S K K E ++KD++ V Q ED +Q L + A
Sbjct: 303 PSRSKWVIYTLINKSNKKGKLSKEDAMKDAKFVGDTGQDEDREAARAIQETLSTKANDHL 362
Query: 360 RYAPSVEQTMYHFHSLL 376
+ E+ + +FHS L
Sbjct: 363 TFG-YFEKAIVNFHSHL 378
>gi|326387574|ref|ZP_08209180.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207620|gb|EGD58431.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 415
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 151/382 (39%), Gaps = 59/382 (15%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P S Y DP+ +LH ++ RSW + G+ ++ + S ++G ++ R +G I A
Sbjct: 20 PQSLYNDPAVFDFDLHAIYGRSWLMAGFACEVPTAGSYTSIKVGPWPVLIIRGKDGTIRA 79
Query: 94 FHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL--V 150
FHN CRH ++L G G+ VCPYH WTY LDG LL A R+ DF GL +
Sbjct: 80 FHNSCRHRGAVLCKEGVGRTPRIVCPYHRWTYALDGELLNAPRMP--DDFETATHGLRSI 137
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
LEV ++ L D+ + + G +L + +++ + + R E
Sbjct: 138 ALEVVAGVIYICL-----------ADNPPAFDAFREGMEALLGPHDLEN--AKVARVETL 184
Query: 211 IE-CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS-IQRCES-------- 260
+E NWK+ +N + YH +H L+ +D+ + Y R E+
Sbjct: 185 VEYANWKLVLENGRE-CYHCQGSHPELSKTFPIDASAYFDYGGADHAARFEARMAELGLP 243
Query: 261 ------------------GSTEGTDDTHRLGSKAIYAF-----------IYPNFMINRYG 291
G T T D K + A + P+ + G
Sbjct: 244 CGPVGEDWWQALRFPLNPGMTSMTMDGSPASRKPMCAVGGGDIGSMRWALEPHSFAHATG 303
Query: 292 PWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQV-QMEDIILCEGVQRG 350
+ +P P V + + + + ++ V ++D L E Q G
Sbjct: 304 EQVFFFSAMPTGPRETLVTAKWLVHKDAVEGVDYDSNAMAQLWHVTNIQDKDLAENNQAG 363
Query: 351 LESPAYCSGRYAPSVEQTMYHF 372
++SP Y G Y+P E + F
Sbjct: 364 VDSPGYTPGPYSPEAEVLVLRF 385
>gi|440777105|ref|ZP_20955920.1| 3-ketosteroid-delta-1-dehydrogenase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436722551|gb|ELP46485.1| 3-ketosteroid-delta-1-dehydrogenase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 1031
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 25 IPIEKAL-TP---PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVE 80
+P+ A+ TP P Y DP F ALE + R WQ+ +++ P DF I +
Sbjct: 6 VPVPWAVQTPDRIPKQRYYDPEFYALEKEMFWPRVWQMACRLEEIPKPGDFVEYEIHDES 65
Query: 81 FVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDG--TLLKATRITG 138
+V R D+ + A+HN CRH L G+G + FVCP+HGW + LDG T +
Sbjct: 66 VIVVRLDSQTVRAYHNACRHRGVKLVEGNGNRRTFVCPFHGWCWSLDGRNTFVLRPETFA 125
Query: 139 IKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWL---GGSSEILSIN 195
++ + LV + WG +N+ +A +W+ + + +
Sbjct: 126 QENLAAADLRLVSVRCELWGGCAWINLDDDA---------PALRDWMEPFASTYDAWRVE 176
Query: 196 GIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
+ CR + NWK+ +++ GYHVP H L G Q S +++ V+
Sbjct: 177 SLRVEWWQSCR----LPVNWKLATAAFME-GYHVPQTHPQLLPGAQTGEPSAAVHPVVA 230
>gi|338740256|ref|YP_004677218.1| Rieske (2Fe-2S) domain-containing protein [Hyphomicrobium sp. MC1]
gi|337760819|emb|CCB66652.1| Rieske 2Fe-2S domain protein [Hyphomicrobium sp. MC1]
Length = 395
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 153/370 (41%), Gaps = 40/370 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P ++ P + Y D + E +F W G + + + + ++ R
Sbjct: 19 PFGQSRMLPRAAYVDDTMFMWEKRHLFDGGWICAGRSSLIPGKSSQTAISLNGRGVLLTR 78
Query: 86 DDNGKIHAFHNVCRHHA-SILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
D G +HAF N+CRH +LA G S ++ VCPYH W YGLDG L A I +
Sbjct: 79 DATGTLHAFENICRHRGHELLAEGESVTRNTIVCPYHAWGYGLDGRLASARGTQSIANAR 138
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAV----HQEEVDSNVVANEWLGGSSEILSINGIDS 199
++ GL L VA WG ++ +N +A+ H +D W E L I G +
Sbjct: 139 KEDLGLTKLGVAEWGGWIFVNGSGDAMPFTKHLGFLDE--FTKNW---ECERLEIGGTHN 193
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL------ASGLQLDSYSTSLYEKV 253
Y ++ NWKV +NY + YH P H L SG Q + + Y
Sbjct: 194 ---------YELKANWKVAIENYHE-CYHCPSIHPALCRVSPTTSGYQY-RHPSGYYTGG 242
Query: 254 SIQRCE-------SGSTEG---TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA 303
++ E SG + G + T + Y ++P +I+ + ++ T+ + P +
Sbjct: 243 CMELVEGAETMSFSGQSNGVVFSGLTPEQRRQVHYITLFPGLLISLHPDYVMTHRLEPTS 302
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQ-SLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYA 362
+ +V + F +++ ++ ED E VQRGL+S Y G +A
Sbjct: 303 ASTSRVECQWLFAPEAVARPDFDPSYAMEFWDKTNREDWGAVESVQRGLQSENYEPGIFA 362
Query: 363 PSVEQTMYHF 372
E +Y F
Sbjct: 363 EE-EAGVYDF 371
>gi|421464939|ref|ZP_15913628.1| putative anthranilate 1,2-dioxygenase, large subunit [Acinetobacter
radioresistens WC-A-157]
gi|400204868|gb|EJO35851.1| putative anthranilate 1,2-dioxygenase, large subunit [Acinetobacter
radioresistens WC-A-157]
Length = 425
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 12/233 (5%)
Query: 10 NLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
+++ Q + +++ + ++A T S Y D + E+ ++FY++W V + ++ D
Sbjct: 3 SIIPMQNIDIDYSELVQSDRAHT---SLYKDAAIFEDEMDKIFYKTWVWVAHASEIPDAG 59
Query: 70 DFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDG 128
+ + IG+ V RD K+H N CRH A+ + GK + FVCPYHGW+Y LDG
Sbjct: 60 SYKTMNIGKQPVVAVRDRKKKVHVLLNRCRHRAATVCEHKKGKTNSFVCPYHGWSYALDG 119
Query: 129 TLLKATRITGIKD-FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
+L + + EF L+ L V + + + + E D A +W+
Sbjct: 120 SLRGVPSPESYGECLDKSEFPLISLRVEEYNGMIFASFNHDVEPLE--DFLGAAKKWI-- 175
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
++ G + L +T NWK+ +N D YH P HK S +
Sbjct: 176 --DLFMKQGAGYPVKVLGEHRFTFPGNWKIQLENTTD-AYHFPLVHKSFLSSV 225
>gi|424860852|ref|ZP_18284798.1| benzoate 1,2-dioxygenase, large subunit [Rhodococcus opacus PD630]
gi|356659324|gb|EHI39688.1| benzoate 1,2-dioxygenase, large subunit [Rhodococcus opacus PD630]
Length = 427
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 9/207 (4%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S YTDP LE+ R+F R+W V + ++ D DF + +G +V RD G I+
Sbjct: 26 SLYTDPELFELEMDRIFNRTWVWVAHESEIPDAGDFKTAMVGRQPVIVTRDRRGGINVLL 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLE 153
N CRH AS+ G + F CPYH W+Y LDG L G ++ K+F L L+
Sbjct: 86 NRCRHRGASLCEVPRGNANGFTCPYHAWSYALDGKLRGIPYPDGYEEVLEKKDFPLHRLQ 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
V ++ + + + E A +W+ ++ G + ++
Sbjct: 146 VDSYAGMIFASFNHDVEPLAEFLGP--AKQWI----DLFMKQGAGYPIKVQGEHKFRFNG 199
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N D GYH P H+ S +
Sbjct: 200 NWKIQLENTTD-GYHFPIVHRSWMSSV 225
>gi|399154699|ref|ZP_10754766.1| [2Fe-2S] protein [gamma proteobacterium SCGC AAA007-O20]
Length = 382
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 161/372 (43%), Gaps = 45/372 (12%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
PI++ P ++ D F+ E +F W +G D+L+ P ++ + ++ R
Sbjct: 22 PIQRLSLPFECYWEDSVFIQ-EQKLIFANQWLGLGRVDRLELPGEYEVFELCGQTLLLIR 80
Query: 86 DDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK 145
D + + F N CRH S L G G+ CP+HGWTY LDG+L A ++ +F+
Sbjct: 81 DQDKILRLFANTCRHRGSKLLDGKGQCQVISCPFHGWTYALDGSLKFAKTMSENSNFDFS 140
Query: 146 EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLC 205
E L+ + F+ +G + ++D+ LG SE+ ++ ++
Sbjct: 141 EHSLIEYNLKEIQGFLFAFLGNQPT---DLDTQ------LGDFSELHQPWSLNELIT--T 189
Query: 206 RRE-YTIECNWKVFCDNYLDGGYHVPYAHKG------------------LASGLQLDSYS 246
RRE + ++CNWK F D + + YH+ H+ AS L + +
Sbjct: 190 RREVFEVQCNWKAFLDVF-NEYYHLNNVHRNSIDNLYCKPEESDKTTGDYASQFGLTAGT 248
Query: 247 TSLYEKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPN--FMINRYGPWM-DTNLVIPLA 303
+L E + + D+ LG++ Y++I+PN F + W+ + N P+
Sbjct: 249 GALLEAQQLYALPKMA--NLDEPWSLGAR--YSWIFPNMTFAAGQEAIWVYEAN---PIT 301
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQS---LKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
RC+V + + F E+S + ++ EDI E Q+GL + G+
Sbjct: 302 SERCQVRQSICFPKNTTELPDFKEKSQAYYQRLDEALDEDITALENQQKGLHNSPSLQGQ 361
Query: 361 YAPSVEQTMYHF 372
++ +E + F
Sbjct: 362 FSTLMEANVATF 373
>gi|158315176|ref|YP_001507684.1| Rieske (2Fe-2S) domain-containing protein [Frankia sp. EAN1pec]
gi|158110581|gb|ABW12778.1| Rieske (2Fe-2S) domain protein [Frankia sp. EAN1pec]
Length = 429
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 41 PSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR--IGEVEFVVCRDDNGKIHAFHNVC 98
P F LE +F R+W VG +QL FF+ + + +V RD +G++HAFHNVC
Sbjct: 32 PEFYELEREAIFRRAWLNVGRVEQLPHKGSFFTRELAVAKTSLIVTRDLDGQVHAFHNVC 91
Query: 99 RHHASILA-------TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVP 151
RH + L SG F+C YHGW YGLDG L + DF+ EF LV
Sbjct: 92 RHRGNKLVWDRTPRDETSGVCRQFMCKYHGWRYGLDGQLKYVLQEEEFFDFDKAEFPLVS 151
Query: 152 LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ W F+ +N+ E Q +D +LG + G++ +L Y
Sbjct: 152 VHCEVWEGFIFINLSAEP-GQSLLD-------FLGP-----MVRGLEGYPFHLVTERYAF 198
Query: 212 EC----NWKVFCDNYLDGGYHVPYAH--------KGLASGLQLDSYST 247
+ NWK++ D + + YH H +G SG + Y
Sbjct: 199 KADILSNWKIYLDAFQE-YYHASILHSQQQVPSLRGFESGFKAPHYQV 245
>gi|161521614|ref|YP_001585041.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|160345664|gb|ABX18749.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
Length = 448
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP+ EL R+FYR+W V + +L P DF + IG +V RD G+++ N
Sbjct: 49 YHDPALFEAELDRIFYRTWIWVAHDSELPRPGDFITTTIGRQPVIVVRDKTGEVNVLQNR 108
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLEVA 155
CRH A++ G F CPYH W+Y LDGTL G + K + LV L V
Sbjct: 109 CRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLRVG 168
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYTIE 212
+ + + E E ++LGG+ ++ G + ++ +
Sbjct: 169 VYQGLIFASFNDEIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFRFK 219
Query: 213 CNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 220 GNWKIQLENTTD-LYHFPVVHK 240
>gi|429213817|ref|ZP_19204981.1| anthranilate dioxygenase large subunit [Pseudomonas sp. M1]
gi|428155412|gb|EKX01961.1| anthranilate dioxygenase large subunit [Pseudomonas sp. M1]
Length = 464
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F + W + ++ +P DF + R G +V R
Sbjct: 23 PAEGVYRIARDMFTEPELFDLEMELIFEKQWIYACHESEIPNPNDFITLRAGRQPMIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG--IKDF 142
D G+++A N C+H A++ G +S F CP+H W Y DG L+K + G DF
Sbjct: 83 DAGGQLNALVNACQHRGATLTRVCKGNQSTFTCPFHAWCYKSDGRLVK-VKAPGEYPADF 141
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ GL + ++ FV +++ A E ++LG + + S
Sbjct: 142 DKASRGLKKARIDSYRGFVFISLDASATDSLE--------DFLGDAKVFFDMMVAQSPTG 193
Query: 203 YL----CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
L R YT E NWK+ +N LD GYHV H + +Q ++V++
Sbjct: 194 ELEVLPGRSAYTFEGNWKLQNENGLD-GYHVSTVHYNYVATVQ-------HRQQVNV--- 242
Query: 259 ESGSTEGTDDTHRLGS 274
E+G+ GT D +LG+
Sbjct: 243 ENGTASGTLDYSKLGA 258
>gi|335032676|ref|ZP_08526051.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium sp.
ATCC 31749]
gi|333795851|gb|EGL67173.1| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium sp.
ATCC 31749]
Length = 468
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 154/373 (41%), Gaps = 42/373 (11%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W VG+ ++ ++ + ++G V+ R +G+I A N
Sbjct: 78 FYTDPDYFKLDMETIWYRDWLFVGHDCEVPKSGNYMTVQVGAYSVVIVRGRDGQIRALQN 137
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + + G+ + VCPYH WTY LDG LL A + ++F+ EFGL P+
Sbjct: 138 SCRHRGSRVCSAQKGQAARLVCPYHQWTYDLDGKLLFARHMG--EEFDKAEFGLKPVACE 195
Query: 156 TWGPFVLLNMGKE----AVHQEEVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE- 208
T +V + + + A + EV+S + + W + E I + L + RE
Sbjct: 196 TVAGYVFICLADQPADFAPMRAEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNREC 255
Query: 209 YTIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYEK 252
Y N C Y DGG P GL S ++D +
Sbjct: 256 YHCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVAR 315
Query: 253 VS-IQRCESGSTEGTDDTHRLGSK--------AIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+ I ES + G R S+ A+ F YP + G + V+PL
Sbjct: 316 MPLIGEAESYTMSGKRAVRRPLSEDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPLN 375
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
V + + KD ++ L+D V E D + E G+ SPAY G
Sbjct: 376 ANETMVTTKWLVH---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYQPG 432
Query: 360 RYAPSVEQTMYHF 372
Y+ E + F
Sbjct: 433 PYSMEDEGGVMQF 445
>gi|416917335|ref|ZP_11932294.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
gi|325527371|gb|EGD04727.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
Length = 427
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L P DF + IG +V RD G+I+
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHESELPKPGDFVTTTIGRQPVIVVRDKTGEINVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + + E +D ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASFNDDI---EPLD------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFR 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|189352219|ref|YP_001947846.1| ring-hydroxylating dioxygenase large terminal subunit [Burkholderia
multivorans ATCC 17616]
gi|189336241|dbj|BAG45310.1| ring-hydroxylating dioxygenase large terminal subunit [Burkholderia
multivorans ATCC 17616]
Length = 427
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP+ EL R+FYR+W V + +L P DF + IG +V RD G+++ N
Sbjct: 28 YHDPALFEAELDRIFYRTWIWVAHDSELPRPGDFITTTIGRQPVIVVRDKTGEVNVLQNR 87
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLEVA 155
CRH A++ G F CPYH W+Y LDGTL G + K + LV L V
Sbjct: 88 CRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLRVG 147
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYTIE 212
+ + + E E ++LGG+ ++ G + ++ +
Sbjct: 148 VYQGLIFASFNDEIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFRFK 198
Query: 213 CNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 199 GNWKIQLENTTD-LYHFPVVHK 219
>gi|159184440|ref|NP_353751.2| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium fabrum
str. C58]
gi|159139753|gb|AAK86536.2| ring hydroxylating dioxygenase, alpha-subunit [Agrobacterium fabrum
str. C58]
Length = 414
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 154/373 (41%), Gaps = 42/373 (11%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTDP + L++ ++YR W VG+ ++ ++ + ++G V+ R +G+I A N
Sbjct: 24 FYTDPDYFKLDMETIWYRDWLFVGHDCEVPKSGNYMTVQVGAYSVVIVRGRDGQIRALQN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + + G+ + VCPYH WTY LDG LL A + ++F+ EFGL P+
Sbjct: 84 SCRHRGSRVCSAQKGQAARLVCPYHQWTYDLDGKLLFARHMG--EEFDKAEFGLKPVACE 141
Query: 156 TWGPFVLLNMGKE----AVHQEEVDSNVVANE-WLGG-SSEILSINGIDSSLSYLCRRE- 208
T +V + + + A + EV+S + + W + E I + L + RE
Sbjct: 142 TVAGYVFICLADQPADFAPMRAEVESYMAPHRIWEAKVAHESTIIEKGNWKLVWENNREC 201
Query: 209 YTIECNWKVFCDNY--------LDGGYHVPY--------AHKGLASGLQLDSYSTSLYEK 252
Y N C Y DGG P GL S ++D +
Sbjct: 202 YHCAANHPELCRTYPENPSVTGTDGGASDPEIGGHWARCEAAGLPSRFKIDPKGQFRVAR 261
Query: 253 VS-IQRCESGSTEGTDDTHRLGSK--------AIYAFIYPNFMINRYGPWMDTNLVIPLA 303
+ I ES + G R S+ A+ F YP + G + V+PL
Sbjct: 262 MPLIGEAESYTMSGKRAVRRPLSEDVSISHIGALLLFHYPTTWNHFLGDHTISFRVLPLN 321
Query: 304 PTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSG 359
V + + KD ++ L+D V E D + E G+ SPAY G
Sbjct: 322 ANETMVTTKWLVH---KDAVEGVDYDLEDLTHVWNETNDQDRRIVEENAFGIRSPAYQPG 378
Query: 360 RYAPSVEQTMYHF 372
Y+ E + F
Sbjct: 379 PYSMEDEGGVMQF 391
>gi|399079108|ref|ZP_10753118.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398032713|gb|EJL26045.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 405
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
+ A T P + YTD +F E +F W VG D +K D+F+ I +V R+
Sbjct: 30 VGSAETLPPACYTDAAFYDFEKEALFNHEWLCVGRVDWVKAQGDYFTTTIIGEPIIVTRN 89
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE 146
+ +I A VC+H A ++A G G FVCPYH W Y L+G L+ A + DF+ K
Sbjct: 90 RSDEIKAMSAVCQHRAMLVAEGRGNTRGFVCPYHHWVYSLNGDLVNAPAMDRTCDFDKKS 149
Query: 147 FGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCR 206
L +V W F+ +N EA ++V E + ++ + G+ ++
Sbjct: 150 VKLPTFKVEVWLGFIFINFDAEAPPLAPRLADV---EAAIANFDLSNAEGLTPPMT---- 202
Query: 207 REYTIECNWKVFCDNYLDGGYHVPYAHKG 235
NWKV +N D GYH H+G
Sbjct: 203 --GQFAWNWKVMFENNND-GYHANKLHRG 228
>gi|183980245|ref|YP_001848536.1| oxidoreductase [Mycobacterium marinum M]
gi|183173571|gb|ACC38681.1| conserved hypothetical oxidoreductase [Mycobacterium marinum M]
Length = 456
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P P+ Y P+F LE+ R++ + WQ+ D + P D+F R G ++
Sbjct: 19 VPPASPTLVPAQRYHSPAFAQLEIERMWPKVWQLACMLDHVAAPGDYFEYRCGPYSVLIV 78
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
D +G + AF NVCRH + L GSG C YHGWT+ L G L + G +
Sbjct: 79 HDCDGVLRAFQNVCRHRGNSLCAGSGSGLRELKCGYHGWTWDLTGELRRVPNRKGFGSLH 138
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ +F L+P+ V TW V +++ A + ++L E ++ G+ +
Sbjct: 139 MPDFPLLPVRVETWEGLVFVSLDVTA---------MPLMDYLDPIPEDIAWCGLS---DF 186
Query: 204 LCRREYTIE--CNWKVFCDNYLDGGYHVPYAHKGL 236
C T+E NWK D Y + YH+ H L
Sbjct: 187 RCYATLTVEVDANWKTIADGYSE-TYHIQTLHPEL 220
>gi|148553889|ref|YP_001261471.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499079|gb|ABQ67333.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 397
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 149/362 (41%), Gaps = 58/362 (16%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRI--GEVEFVVCRDDNGKIHAFH 95
Y P + E ++F + W VG ++L P D+ RI +V R +G+I AFH
Sbjct: 24 YISPEWYEKEKEKIFSKVWLCVGRANELPRPGDYKVKRIEAANTSVIVMRGKDGQIRAFH 83
Query: 96 NVCRHHASILATGSGKKSW-------FVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEF 147
N+C H + + T +G++++ C +HGW Y DG L F+ +
Sbjct: 84 NMCAHRGNTVVTENGQETYGRNRAGVITCRFHGWVYAADGALRSVPSQERFYSCFDKGDN 143
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS---INGIDSSLSYL 204
GL P+ + TW F+ +N+ ++ H E+LG +E +D +Y
Sbjct: 144 GLAPIHLDTWEGFLFVNVAEKPEHS--------LAEFLGDYAEHFRGFPFEELDYGFTY- 194
Query: 205 CRREYTIECNWKVFCDNYLDGGYHVPYAHKG-----LASGLQ----------------LD 243
R E ++CNWKV D + + YHV H G +SGLQ LD
Sbjct: 195 -RTE--LDCNWKVAHDAFAE-AYHVDTIHAGSFPNVFSSGLQNVKLMGPHRTCAVCLTLD 250
Query: 244 SYSTSLY--------EKVSIQRCESGSTEGTDDTHRLGSKAIYAFIYPNFMIN-RYGPWM 294
+ T + + QR +S + HR + ++PN +++ G W
Sbjct: 251 AKPTPVAGIANRIAGASLVSQRGKSMLPATINPDHRPDFAFELSVLFPNTLLHVSEGIWF 310
Query: 295 DTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGLES 353
T+ PLA R Y++ + + IE ++ +ED E QR ++S
Sbjct: 311 -THQFWPLAHNRTLWEGRYYVKAPTSNAGRWAIEHAMTLQRNAWLEDTATMEDTQRAMQS 369
Query: 354 PA 355
A
Sbjct: 370 RA 371
>gi|398990717|ref|ZP_10693890.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399013450|ref|ZP_10715755.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398113569|gb|EJM03414.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398143167|gb|EJM32047.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 411
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 157/375 (41%), Gaps = 42/375 (11%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P + Y++ S +L +++++ W G+T ++ P +F+ +IG+ V R +G++ A
Sbjct: 21 PGALYSNESVYRQDLEQIWHKDWIFAGHTFEITKPGQYFTLQIGDYPVAVVRGKDGEVRA 80
Query: 94 FHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH A I GK + VCPYH WTY LDG LL A + +DF+ ++ L +
Sbjct: 81 FHNACRHRGAKICEADHGKVAKMVCPYHKWTYELDGNLLFAGNMG--QDFDKSQYSLKSV 138
Query: 153 EVATWGPFVLLNMGKEAVHQE---EVDSNVVANEWLGGSSEILSINGIDS---SLSYLCR 206
++ + + +A E + S +A +L N I+ L +
Sbjct: 139 HCEIVDTYIYVCVAAKAPDFEGFRKAVSPFIAPHYLENCKVAFESNIIEKGNWKLVFENN 198
Query: 207 REYTIECN------WKVFCDNYLDGG-----------YHVPYAHKGLASGLQLDSYSTSL 249
RE C+ F DN GG Y GL S L +D
Sbjct: 199 RE-CYHCDGSHPELLHSFVDNLSVGGISGEDDPELSAYWSKCESAGLPSRLVMDINGQFR 257
Query: 250 YEKVSIQRCESGSTEGT-----------DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNL 298
++ + SG+ T D T A+ F YP+ + G +
Sbjct: 258 MTRIPLS---SGAVSYTMDGKPAVAGRLDKTAEADIGALLYFHYPSTWNHFLGDHALSFR 314
Query: 299 VIPLAPTRCKVVFDYFL-DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYC 357
V+P++ T V + + D +++ IE+ K +D L EG QRG+ SP+Y
Sbjct: 315 VLPISATETLVTTKWLVPDSAVEGVDYDIERLTKVWIATNDQDRTLVEGTQRGVTSPSYE 374
Query: 358 SGRYAPSVEQTMYHF 372
G Y+ + E + F
Sbjct: 375 PGPYSETAETGVCQF 389
>gi|114331664|ref|YP_747886.1| Rieske (2Fe-2S) domain-containing protein [Nitrosomonas eutropha
C91]
gi|114308678|gb|ABI59921.1| Rieske (2Fe-2S) domain protein [Nitrosomonas eutropha C91]
Length = 368
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 148/372 (39%), Gaps = 57/372 (15%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
WY DP LE +F + VG+ + + D++ V+ R++NG I N
Sbjct: 21 WYLDPRIFELEKQLLFDQGPGYVGHELMVPETGDYYVLAAQNNAKVLVRNENG-IELLSN 79
Query: 97 VCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
+CRH +I+ G G VCP H WTY +DG LL A + N+ + L
Sbjct: 80 ICRHRQAIILEGRGSSRNIVCPIHRWTYAMDGKLLGAPHFSKNPCLNLGKTAL-----QH 134
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT-IECNW 215
W + GK V+Q+ V + +D S L R + +CNW
Sbjct: 135 WNGLIF--AGKRDVNQDVAGMKVR--------------DKLDFSKYALDRVQIEHYQCNW 178
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD-DTHRLGS 274
K F + YL+ YHV H GL + + S+Q T G + D +R GS
Sbjct: 179 KTFIEVYLE-DYHVDPFHPGLGHFVDTSQLEWEFSDWYSVQ------TVGVNRDFNRAGS 231
Query: 275 K---------------------AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRC-KVVFD 312
+ AI+ YPN M+ Y + + ++P +C VV
Sbjct: 232 EIYQEWHTQVLQHNNQQVPRHGAIWLLYYPNVMVEWYPDTLVVSTILPTGIEQCMNVVEF 291
Query: 313 YFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRG----LESPAYCSGRYAPSVEQT 368
Y+ + + ++ F+E+ ++ ED +C+ + G + +G Y +E
Sbjct: 292 YYPEEIILFEREFVEREQAAYQETAREDDEICKRITAGRRALYQQGINETGPYQMPMEAG 351
Query: 369 MYHFHSLLHCNL 380
M HFH L L
Sbjct: 352 MEHFHHFLRREL 363
>gi|171318619|ref|ZP_02907766.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
gi|171096172|gb|EDT41094.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
Length = 427
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+ Y DP+ EL R+FYR+W V + +L +P DF + IG +V RD G+++
Sbjct: 26 AMYHDPALFEAELDRIFYRTWIWVAHDSELPNPGDFVTTTIGRQPVIVVRDKTGEVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLE 153
N CRH A++ + G F CPYH W+Y LDGTL G + K + LV L
Sbjct: 86 NRCRHRGATVCESHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCEKGDLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + + E ++LGG+ ++ G + ++
Sbjct: 146 VGVYQGLIFASFDDDIEPLE---------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFK 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHK 219
>gi|400534675|ref|ZP_10798213.1| hypothetical protein MCOL_V209785 [Mycobacterium colombiense CECT
3035]
gi|400332977|gb|EJO90472.1| hypothetical protein MCOL_V209785 [Mycobacterium colombiense CECT
3035]
Length = 464
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 27 IEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRD 86
++ A P Y DP F ALE + R WQ+ +++ DF I + +V R
Sbjct: 27 VQTADRIPKQRYYDPDFYALECDMFWPRVWQMACRLEEIPKAGDFVEYEILDESIIVVRV 86
Query: 87 DNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK- 145
D G + A+HN CRH L G+G + FVCP+HGW +G+DG R + N+
Sbjct: 87 DAGTVRAYHNACRHRGVKLVEGNGNRRTFVCPFHGWCWGVDGRNTFVLRPEAFTEENMTG 146
Query: 146 -EFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYL 204
+ LV + WG +N+ +A +W+ + +DS
Sbjct: 147 DDLRLVSVRCELWGGCAWINLDDDA---------PALRDWMEPFATTYDAWQVDS----- 192
Query: 205 CRREYTIEC----NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVS 254
R E+ C NWK+ +++ GYHVP H L Q S +++ V+
Sbjct: 193 LRVEWWQSCRLPVNWKLATAAFME-GYHVPQTHPQLLPSAQTGEPSAAVHPVVA 245
>gi|238492593|ref|XP_002377533.1| iron-sulfur domain containing protein, putative [Aspergillus flavus
NRRL3357]
gi|220696027|gb|EED52369.1| iron-sulfur domain containing protein, putative [Aspergillus flavus
NRRL3357]
Length = 271
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P +AL P+SWY LE +F + W +V + +L P DF +C
Sbjct: 19 PEARAL--PASWYHSSPLYELERRAIFSKRWLLVTHRSRLTKPGDFIRYEEAGFPIFLCL 76
Query: 86 DDNGKIHAFHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D G + FHNVCRH A ++ + SG + C YHGW+YGL+G L KA R + F+
Sbjct: 77 DRQGNLRGFHNVCRHRAFPVVISDSGSANILACKYHGWSYGLNGKLAKAPRFDDVSGFDK 136
Query: 145 KEFGLVPLEV-ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE--ILSINGIDSSL 201
++ GL + V V +N+ +E + ++LG ++ + N +
Sbjct: 137 EDNGLFSIHVHVDQRGLVWVNLDA-----KETPTTPWNEDFLGADTQGRLQDFNMTEYKF 191
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLY 250
+ + NWK DNY + YH AH G+A+ L +Y +
Sbjct: 192 DHAW--DMVGNYNWKTLVDNY-NECYHCGVAHPGIAAISDLTTYDVQTH 237
>gi|375265349|ref|YP_005022792.1| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [Vibrio
sp. EJY3]
gi|369840670|gb|AEX21814.1| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [Vibrio
sp. EJY3]
Length = 452
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 31 LTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGK 90
+TP S YTDP LEL R+F R W + + Q+ P DFF+ +GE VV R +G
Sbjct: 20 VTP--SIYTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGS 77
Query: 91 IHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGI--KDFNVKEF 147
I AF N CRH A ++ G G F CPYHGW+YG+DG L+ + ++
Sbjct: 78 IKAFLNQCRHRAMRVSNGDCGNTRAFTCPYHGWSYGIDGNLIDVPLEPRAYPQGLCKSQW 137
Query: 148 GL--VPLEVATWGPFVLLNMGKEAVHQEEVDSNV------VANEWLGGSSEILSINGIDS 199
GL VP V ++ + N A +E ++ V + GG+ + +
Sbjct: 138 GLNEVPC-VESYKGLIFANWDTSAPDLKEYLGDIAWYLDGVLDRREGGTEIVGGV----- 191
Query: 200 SLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL 242
+++ I+CNWK + + YH ++H AS +Q+
Sbjct: 192 -------QKWVIDCNWKFPAEQFASDQYHALFSH---ASAVQV 224
>gi|423095524|ref|ZP_17083320.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens Q2-87]
gi|397888220|gb|EJL04703.1| Rieske [2Fe-2S] domain protein [Pseudomonas fluorescens Q2-87]
Length = 411
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 153/372 (41%), Gaps = 36/372 (9%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y+ +L +++++ W G+T +L+ P +F+ ++G+ V R +G++ A
Sbjct: 21 PGKLYSSEGVYRQDLEQIWHKDWIFAGHTFELEKPGQYFTLQVGDYPVAVVRGKDGQVRA 80
Query: 94 FHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH A I GK + VCPYH WTY LDG LL A + +DF+ E+ L +
Sbjct: 81 FHNACRHRGAKICEADHGKVAKMVCPYHKWTYELDGNLLFAGNMG--QDFDKSEYNLKSV 138
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNV---VANEWLGGSSEILSINGIDS---SLSYLCR 206
F+ + + +A E + V VA L N ++ L +
Sbjct: 139 HCEIVNTFIYVCVASKAPDFEHFRTAVTPFVAPHNLDDCKVAFESNIVEKGNWKLVFENN 198
Query: 207 REYTIECN------WKVFCDNYLDGG-----------YHVPYAHKGLASGLQLDSYSTSL 249
RE C+ + F DN GG Y GL S L +D
Sbjct: 199 RE-CYHCDGSHPELLQSFVDNLSVGGTSGDDDPELSAYWNKCEKAGLPSRLVMDIKGQFR 257
Query: 250 YEKVSIQR--------CESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIP 301
++ + + + T D T A+ F YP+ + G + V+P
Sbjct: 258 MTRIPLSKGAVSYTMDGKPAVTSRLDTTGEADIGALLYFNYPSTWNHFLGDHALSFRVLP 317
Query: 302 LAPTRCKVVFDYF-LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGR 360
++ T V + L +++ I++ K +D L EG QRG+ SP+Y G
Sbjct: 318 ISATETLVTTKWLVLKTAVEGVDYDIDRLTKVWIATNDQDRTLVEGTQRGVTSPSYEPGP 377
Query: 361 YAPSVEQTMYHF 372
Y+ + E + F
Sbjct: 378 YSETAETGVCQF 389
>gi|375263468|ref|YP_005025698.1| Rieske (2Fe-2S) domain-containing protein [Vibrio sp. EJY3]
gi|369843895|gb|AEX24723.1| Rieske (2Fe-2S) domain-containing protein [Vibrio sp. EJY3]
Length = 419
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP +++ +F + W VG T ++ D+F+ I + ++ RD +G+++A
Sbjct: 35 PRPLYNDPLLFKIDVEEIFQKEWLFVGMTSEIPSKGDYFTVEIAQSPVLIVRDADGQVNA 94
Query: 94 FHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH S I GK + VCPYH WTY G LL A G +F++++ L P+
Sbjct: 95 FHNTCRHRGSRICLEHRGKVANLVCPYHQWTYDTKGNLLFAGTEMG-DEFDMQKHKLKPV 153
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
T G F+ + +G++ + +E+L E + ++++ + Y +
Sbjct: 154 HCKTAGGFIFICLGEQPPESD-------FDEFLATLEEYMEPYDVENTKLAVESNMYE-K 205
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N + YH +H L + L
Sbjct: 206 ANWKLVLENNRE-CYHCSGSHPELLNTL 232
>gi|82701367|ref|YP_410933.1| Rieske (2Fe-2S) domain-containing protein [Nitrosospira multiformis
ATCC 25196]
gi|82409432|gb|ABB73541.1| Rieske (2Fe-2S) region [Nitrosospira multiformis ATCC 25196]
Length = 365
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 145/366 (39%), Gaps = 47/366 (12%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P WY D L LE +F + VG+ + + D++ + ++ R+ +G I
Sbjct: 16 PVDWYLDSQILELEKRILFDQGPGYVGHEIMVPNIGDYYVPEWMDNAKMLVRNKDG-IEL 74
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
NVCRH S+L GSG VCP H WTY L GTLL A N+ PL+
Sbjct: 75 LSNVCRHRQSLLLKGSGNTRNIVCPVHRWTYDLKGTLLGAPHFPENPCLNLSN---SPLQ 131
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
W LL G+ V ++ + V+ N S +L ID EY C
Sbjct: 132 --NWNG--LLFQGRRNVARDLGNLQVLKN--FDFSGHVLERLQID---------EYA--C 174
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC--------------- 258
NWK F + YL+ YHV H GL + + + E ++Q
Sbjct: 175 NWKTFIEVYLE-DYHVEPYHPGLGNFVDTAALEWEFGEWYNVQTVGINNALTRPGTPVYA 233
Query: 259 ---ESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL 315
E + + R G AI+ YPN M+ Y + + V+P RC V +++
Sbjct: 234 KWHEQLLLQTAGEIPRHG--AIWMLYYPNVMMEWYPHVLVVSTVLPTGTERCTNVVEFYY 291
Query: 316 DGSLKD-DKAFIEQSLKDSEQVQMEDIILC----EGVQRGLESPAYCSGRYAPSVEQTMY 370
+ ++ FIE + ED +C EG + + G Y +E M
Sbjct: 292 PEDIALFEREFIEAEQAAYRETAAEDDEICRLMTEGRRALYKQGVSEVGPYQSPMEDGMV 351
Query: 371 HFHSLL 376
HFH L
Sbjct: 352 HFHKFL 357
>gi|336246969|ref|YP_004590679.1| ring hydroxylating dioxygenase subunit alpha [Enterobacter
aerogenes KCTC 2190]
gi|444354918|ref|YP_007391062.1| Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein (EC 1.14.12.18) [Enterobacter aerogenes EA1509E]
gi|334733025|gb|AEG95400.1| ring hydroxylating dioxygenase subunit alpha [Enterobacter
aerogenes KCTC 2190]
gi|443905748|emb|CCG33522.1| Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S)
protein (EC 1.14.12.18) [Enterobacter aerogenes EA1509E]
Length = 434
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YT LE+ +F R+W V + ++ D + S +G +V RD G I+ N
Sbjct: 33 YTSEEIFDLEIDNIFNRTWVWVAHESEIPDAGSYKSSMVGTQPVIVVRDRKGNINVLLNR 92
Query: 98 CRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLEVA 155
CRH A+ + SGK + F CPYHGW YGLDG L D N E G+V L V
Sbjct: 93 CRHRAATVCEHRSGKTNGFTCPYHGWGYGLDGALRGVPHPESYGDTLNKSELGMVRLRVE 152
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
++ + + + + D A +W+ ++ G +L + NW
Sbjct: 153 SYAGMIFASFNHDI--EPLTDFLGPAMKWM----DLFMKQGAGYALQATTAHRFRFPGNW 206
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGL 240
K+ +N D GYH P HK S +
Sbjct: 207 KIQLENTTD-GYHFPIVHKSFLSSV 230
>gi|377563856|ref|ZP_09793185.1| putative aromatic-ring-hydroxylating dioxygenase alpha subunit
[Gordonia sputi NBRC 100414]
gi|377528940|dbj|GAB38350.1| putative aromatic-ring-hydroxylating dioxygenase alpha subunit
[Gordonia sputi NBRC 100414]
Length = 436
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 25/240 (10%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP E++RV+ +W + + ++ +P DF ++G +V RD NG+IH N
Sbjct: 26 YTDPQIFVTEMNRVYGGTWTYLAHESEIPEPNDFVRRKLGLRPIIVTRDRNGEIHGLINR 85
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGI-KDFNVKEFGLVPLEVA 155
C H A++ T SG F+CPYH WT+ G L G FN E GL L V
Sbjct: 86 CTHRGATVCRTDSGNARSFMCPYHNWTFNNTGKLTGVPMHKGYGASFNRDELGLGRLRVD 145
Query: 156 TWGPFVLLNMGKE----AVHQEEVDSNVVANEWLGG--SSEILSINGIDSSLSYLCRREY 209
++ F+ + +E A H V + ++WL +E++ +G E
Sbjct: 146 SYRGFIFGTLNQEISDLATHLGSVTDYI--DQWLDRWPGAELVVRHG-----------ET 192
Query: 210 TIEC--NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTD 267
+ C NWK+ DN D GYH ++H L ++ + Y + + ++ ++G TD
Sbjct: 193 RLNCKGNWKLIYDNSAD-GYHPGFSHASLLR-MRKERYGVGVDMQWALGDTDAGKQTVTD 250
>gi|288915992|ref|ZP_06410374.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
gi|288352621|gb|EFC86816.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
Length = 483
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 13/246 (5%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P YT FL LE+ V+ + WQ+ +++ +P D I F++ R +G I A
Sbjct: 58 PIDRYTSREFLELEVEHVWRKVWQMACREEEIPEPGDHIVYEIINDSFIIARTPDGSIKA 117
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRIT-GIKDFNVKEFGLVPL 152
N C H L G+ F CP+HGW + LDG + + + K + ++F L +
Sbjct: 118 LQNACLHRGRRLRATDGRVPEFRCPFHGWAWNLDGDMKRLPCVEWDFKHVDPEKFSLPEV 177
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
+V TWG FV +NM + E E+L E G ++ I
Sbjct: 178 KVGTWGGFVFINMDPDCEPLE---------EFLAPIPEHFKHTGYENRFKS-AHVAQVIS 227
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRL 272
NWKV + +++ YH+P H A +Q L+ K ++ R S + L
Sbjct: 228 ANWKVALEAFIE-AYHLPQTHPQTAPSIQDFMSQVDLFGK-NVNRVLSARGVSSSTLGEL 285
Query: 273 GSKAIY 278
+ IY
Sbjct: 286 EEEDIY 291
>gi|15610297|ref|NP_217677.1| Possible dioxygenase [Mycobacterium tuberculosis H37Rv]
gi|15842738|ref|NP_337775.1| Rieske 2Fe-2S family protein [Mycobacterium tuberculosis CDC1551]
gi|148663016|ref|YP_001284539.1| Rieske 2Fe-2S family protein [Mycobacterium tuberculosis H37Ra]
gi|148824355|ref|YP_001289109.1| dioxygenase [Mycobacterium tuberculosis F11]
gi|167970172|ref|ZP_02552449.1| hypothetical dioxygenase [Mycobacterium tuberculosis H37Ra]
gi|254365786|ref|ZP_04981831.1| hypothetical dioxygenase [Mycobacterium tuberculosis str. Haarlem]
gi|254552251|ref|ZP_05142698.1| dioxygenase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|289763344|ref|ZP_06522722.1| dioxygenase [Mycobacterium tuberculosis GM 1503]
gi|297635804|ref|ZP_06953584.1| dioxygenase [Mycobacterium tuberculosis KZN 4207]
gi|297732801|ref|ZP_06961919.1| dioxygenase [Mycobacterium tuberculosis KZN R506]
gi|306777478|ref|ZP_07415815.1| dioxygenase [Mycobacterium tuberculosis SUMu001]
gi|306782203|ref|ZP_07420540.1| dioxygenase [Mycobacterium tuberculosis SUMu002]
gi|306786025|ref|ZP_07424347.1| dioxygenase [Mycobacterium tuberculosis SUMu003]
gi|306790391|ref|ZP_07428713.1| dioxygenase [Mycobacterium tuberculosis SUMu004]
gi|306794914|ref|ZP_07433216.1| dioxygenase [Mycobacterium tuberculosis SUMu005]
gi|306799114|ref|ZP_07437416.1| dioxygenase [Mycobacterium tuberculosis SUMu006]
gi|306804957|ref|ZP_07441625.1| dioxygenase [Mycobacterium tuberculosis SUMu008]
gi|306809146|ref|ZP_07445814.1| dioxygenase [Mycobacterium tuberculosis SUMu007]
gi|306969248|ref|ZP_07481909.1| dioxygenase [Mycobacterium tuberculosis SUMu009]
gi|306973596|ref|ZP_07486257.1| dioxygenase [Mycobacterium tuberculosis SUMu010]
gi|307081305|ref|ZP_07490475.1| dioxygenase [Mycobacterium tuberculosis SUMu011]
gi|307085908|ref|ZP_07495021.1| dioxygenase [Mycobacterium tuberculosis SUMu012]
gi|313660134|ref|ZP_07817014.1| dioxygenase [Mycobacterium tuberculosis KZN V2475]
gi|375297427|ref|YP_005101694.1| dioxygenase [Mycobacterium tuberculosis KZN 4207]
gi|383308900|ref|YP_005361711.1| dioxygenase [Mycobacterium tuberculosis RGTB327]
gi|385999947|ref|YP_005918246.1| dioxygenase [Mycobacterium tuberculosis CTRI-2]
gi|392387782|ref|YP_005309411.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|392433636|ref|YP_006474680.1| dioxygenase [Mycobacterium tuberculosis KZN 605]
gi|397675089|ref|YP_006516624.1| oxidoreductase [Mycobacterium tuberculosis H37Rv]
gi|13883061|gb|AAK47589.1| Rieske 2Fe-2S family protein [Mycobacterium tuberculosis CDC1551]
gi|134151299|gb|EBA43344.1| hypothetical dioxygenase [Mycobacterium tuberculosis str. Haarlem]
gi|148507168|gb|ABQ74977.1| Rieske 2Fe-2S family protein [Mycobacterium tuberculosis H37Ra]
gi|148722882|gb|ABR07507.1| hypothetical dioxygenase [Mycobacterium tuberculosis F11]
gi|289710850|gb|EFD74866.1| dioxygenase [Mycobacterium tuberculosis GM 1503]
gi|308214190|gb|EFO73589.1| dioxygenase [Mycobacterium tuberculosis SUMu001]
gi|308324964|gb|EFP13815.1| dioxygenase [Mycobacterium tuberculosis SUMu002]
gi|308329183|gb|EFP18034.1| dioxygenase [Mycobacterium tuberculosis SUMu003]
gi|308333015|gb|EFP21866.1| dioxygenase [Mycobacterium tuberculosis SUMu004]
gi|308336700|gb|EFP25551.1| dioxygenase [Mycobacterium tuberculosis SUMu005]
gi|308340541|gb|EFP29392.1| dioxygenase [Mycobacterium tuberculosis SUMu006]
gi|308344480|gb|EFP33331.1| dioxygenase [Mycobacterium tuberculosis SUMu007]
gi|308348476|gb|EFP37327.1| dioxygenase [Mycobacterium tuberculosis SUMu008]
gi|308353106|gb|EFP41957.1| dioxygenase [Mycobacterium tuberculosis SUMu009]
gi|308357018|gb|EFP45869.1| dioxygenase [Mycobacterium tuberculosis SUMu010]
gi|308360973|gb|EFP49824.1| dioxygenase [Mycobacterium tuberculosis SUMu011]
gi|308364576|gb|EFP53427.1| dioxygenase [Mycobacterium tuberculosis SUMu012]
gi|328459932|gb|AEB05355.1| dioxygenase [Mycobacterium tuberculosis KZN 4207]
gi|344220994|gb|AEN01625.1| dioxygenase [Mycobacterium tuberculosis CTRI-2]
gi|378546333|emb|CCE38612.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|379029504|dbj|BAL67237.1| dioxygenase [Mycobacterium tuberculosis str. Erdman = ATCC 35801]
gi|380722853|gb|AFE17962.1| dioxygenase [Mycobacterium tuberculosis RGTB327]
gi|392055045|gb|AFM50603.1| dioxygenase [Mycobacterium tuberculosis KZN 605]
gi|395139994|gb|AFN51153.1| oxidoreductase [Mycobacterium tuberculosis H37Rv]
gi|440582645|emb|CCG13048.1| putative DIOXYGENASE [Mycobacterium tuberculosis 7199-99]
gi|444896708|emb|CCP45972.1| Possible dioxygenase [Mycobacterium tuberculosis H37Rv]
Length = 382
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQ+ D+ + + +V RD +G
Sbjct: 27 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQVAKTGDYVTVSVAGEPVMVVRDVDG 86
Query: 90 KIHAFHNVCRHHASILA-TGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 87 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 146
Query: 149 LVPLEVATWGPFVLLNMGKEA 169
L VATW V +N+ +A
Sbjct: 147 LPQFAVATWNGLVWINLDADA 167
>gi|253800195|ref|YP_003033196.1| dioxygenase [Mycobacterium tuberculosis KZN 1435]
gi|422814240|ref|ZP_16862605.1| dioxygenase [Mycobacterium tuberculosis CDC1551A]
gi|253321698|gb|ACT26301.1| dioxygenase [Mycobacterium tuberculosis KZN 1435]
gi|323718021|gb|EGB27203.1| dioxygenase [Mycobacterium tuberculosis CDC1551A]
Length = 385
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 30 ALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNG 89
AL+ P + YT LE R+F RSW +V + DQ+ D+ + + +V RD +G
Sbjct: 30 ALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQVAKTGDYVTVSVAGEPVMVVRDVDG 89
Query: 90 KIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFG 148
++HA +CRH ++ G+G+ C YH W YGLDG L A + DFN +E
Sbjct: 90 QLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECR 149
Query: 149 LVPLEVATWGPFVLLNMGKEA 169
L VATW V +N+ +A
Sbjct: 150 LPQFAVATWNGLVWINLDADA 170
>gi|425746366|ref|ZP_18864396.1| putative anthranilate 1,2-dioxygenase, large subunit [Acinetobacter
baumannii WC-323]
gi|425486243|gb|EKU52615.1| putative anthranilate 1,2-dioxygenase, large subunit [Acinetobacter
baumannii WC-323]
Length = 426
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 12/233 (5%)
Query: 10 NLVAAQKLVYEFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQ 69
N++ Q + +++ + ++A T S Y D E+ +++Y +W V + ++ D
Sbjct: 4 NIIPMQNIEMDYSSLVQSDRAHT---SLYKDEKIFEDEMEKIYYSTWVWVAHASEIPDAG 60
Query: 70 DFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDG 128
+ + IG+ VV RD K+H N CRH A+ + GK + FVCPYHGW+Y LDG
Sbjct: 61 SYKTINIGKQPVVVVRDRKKKVHVLLNRCRHRAATVCEHKKGKTNSFVCPYHGWSYALDG 120
Query: 129 TLLKATRITGIKD-FNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGG 187
+L + + EF L+ L V + + ++ E D A +W+
Sbjct: 121 SLRGVPSPESYGECLDKSEFPLISLRVEEYNGMIFATFKQDIEPLE--DFLGAAKKWI-- 176
Query: 188 SSEILSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
++ G + L + NWK+ +N D YH P HK S +
Sbjct: 177 --DLFMKQGAGYPIKVLGEHRFRFPGNWKIQLENTTD-AYHFPLVHKSFLSSV 226
>gi|221210821|ref|ZP_03583801.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD1]
gi|221169777|gb|EEE02244.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD1]
Length = 427
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 15/215 (6%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP+ EL R+FYR+W V + +L P DF + IG +V RD G+++ N
Sbjct: 28 YHDPALFEAELDRIFYRTWIWVAHDSELPRPGDFITTTIGRQPVIVVRDKTGEVNVLQNR 87
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLEVA 155
CRH A++ G F CPYH W+Y LDGTL G + K + LV L V
Sbjct: 88 CRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLRVG 147
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYTIE 212
+ + + +A+ E ++LGG+ ++ G + ++ +
Sbjct: 148 VYQGLIFASF-NDAIEPLE--------DFLGGAKPWIDLFMKQGAGYPIKANGEHKFRFK 198
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
NWK+ +N D YH P HK + ++ +T
Sbjct: 199 GNWKIQLENTTD-LYHFPVVHKSWMKSIDDETAAT 232
>gi|83718159|ref|YP_438528.1| benzoate 1,2-dioxygenase subunit alpha [Burkholderia thailandensis
E264]
gi|167576835|ref|ZP_02369709.1| benzoate 1,2-dioxygenase, alpha subunit [Burkholderia thailandensis
TXDOH]
gi|257141582|ref|ZP_05589844.1| benzoate 1,2-dioxygenase, alpha subunit [Burkholderia thailandensis
E264]
gi|83651984|gb|ABC36048.1| benzoate 1,2-dioxygenase, alpha subunit [Burkholderia thailandensis
E264]
Length = 427
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y D EL R+FYR+W V + +L +P DF + IG +V RD NG ++
Sbjct: 26 SMYYDAELFEAELERIFYRTWIWVAHDSELPNPGDFVTTTIGRQPVIVVRDRNGDVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF-NVKEFGLVPLE 153
N CRH A++ G F CPYH W+Y LDGTL G + + + LV L
Sbjct: 86 NRCRHRGATVCEAHRGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKADLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
T+ V + ++ E +D + A W+ ++ G + + +
Sbjct: 146 TGTYQGLVFASFNQDI---EPLDDFLGAAKPWI----DLFMKQGAGYPIKANGEHRFRFK 198
Query: 213 CNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 199 GNWKIQLENTTD-LYHFPVVHK 219
>gi|383817825|ref|ZP_09973127.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Mycobacterium phlei RIVM601174]
gi|383339889|gb|EID18215.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Mycobacterium phlei RIVM601174]
Length = 380
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 140/336 (41%), Gaps = 36/336 (10%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P Y DP A +L R+ V+G+ ++ +P + + + VV R +G++ A
Sbjct: 32 PRDTYVDPDRFAADL-RMLRSVPHVIGWGGEVAEPGSYTTKDVLGTPVVVTRAHDGQLRA 90
Query: 94 FHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
F N C H + +A G G+ F CPYHGWTY LDG L A ++ GL PL
Sbjct: 91 FVNGCAHRGAQVADGCGRARTFQCPYHGWTYTLDGRLKGAPARRMFDGADLDHRGLRPLP 150
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
VA G +++ + EVD + L G + LS ++ RR Y + C
Sbjct: 151 VAVRGGLIVVGLSP------EVDVSTA----LDGVATALSDYPFAHAVHVETRR-YELAC 199
Query: 214 NWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYE---------KVSIQRCESGSTE 264
NWK+ D + GYH P+ H L ++ +Y + + + +E
Sbjct: 200 NWKIAVDFNFE-GYHFPFVHPDTLDPLACNNSVYDIYGRHIRWAFPFRDIVDYRDQPESE 258
Query: 265 GTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL------DGS 318
D + +Y + +I G T+ ++ P R +L +
Sbjct: 259 WPD---QFFGTVVYGLLPSCVLIEAPG----TSQMLRAYPGRSPGETVVYLSISAPAEPQ 311
Query: 319 LKDDKAFIEQSLKDSEQV-QMEDIILCEGVQRGLES 353
D++A+ + L + QV +D + E QRGLE+
Sbjct: 312 TDDERAWYKMGLDGAAQVLDGQDFPMAEACQRGLEA 347
>gi|148553896|ref|YP_001261478.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499086|gb|ABQ67340.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 396
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 21/233 (9%)
Query: 20 EFNPQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSG--RIG 77
F + P E P YT P + LE R+F R W VG Q P D+F +I
Sbjct: 7 RFMERYPEEGRDPIPVERYTSPDYFNLERERIFRRKWLNVGQILQAPKPGDYFVADLKIL 66
Query: 78 EVEFVVCRDDNGKIHAFHNVCRHHASILATGSGK--KSWFVCPYHGWTYGLDGTLLKATR 135
+ +V +G+ AFHN+C H + +A + K + C +HGW Y G L++ +
Sbjct: 67 DTSLLVIHGKDGRYRAFHNMCSHRGAPVAWDAQGSCKGYLACRFHGWVYDTTGKLVQISD 126
Query: 136 ITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE---IL 192
+E GL P+ A W F+ +NM E EE ++LG +E
Sbjct: 127 AANFPGVKAEENGLTPVHCAVWKGFIFVNMAAEP---EE-----TLLDYLGPVAEEVGRF 178
Query: 193 SINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAH-KGLASGLQLDS 244
+G + SY NWK + L+ G+H+PY H K LA +++D
Sbjct: 179 DFDGFTPAFSYRIDE----NVNWKTLQEAQLE-GWHLPYLHEKTLARAVKVDG 226
>gi|313106048|ref|ZP_07792307.1| hypothetical protein PA39016_000150043 [Pseudomonas aeruginosa
39016]
gi|386064895|ref|YP_005980199.1| hypothetical protein NCGM2_1955 [Pseudomonas aeruginosa NCGM2.S1]
gi|310878809|gb|EFQ37403.1| hypothetical protein PA39016_000150043 [Pseudomonas aeruginosa
39016]
gi|348033454|dbj|BAK88814.1| hypothetical protein NCGM2_1955 [Pseudomonas aeruginosa NCGM2.S1]
Length = 376
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 160/377 (42%), Gaps = 78/377 (20%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF
Sbjct: 8 AAHYTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAF 66
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVP 151
N C H S + T + VCPYH W++G +G L+ + + F+ +E GL
Sbjct: 67 LNQCPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSAEERARIGLRK 125
Query: 152 LEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L + + +N+ + + +E+ D +L E+ S +D+ L Y C +
Sbjct: 126 LHLEEVEQLLFVNLADDPLPLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HK 175
Query: 211 IECNWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS-------------- 244
+ NWK+ +N D HVP+ H +GLA + S
Sbjct: 176 VRYNWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQEGETPEL 234
Query: 245 YSTSLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRY 290
S S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 235 RSLSFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQY 289
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEG 346
P+AP + + KD K A + ++ V ED ++ E
Sbjct: 290 D---------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLER 339
Query: 347 VQRGL--ESPAYCSGRY 361
+Q GL SP + G Y
Sbjct: 340 LQEGLGAHSPPFMHGDY 356
>gi|363421137|ref|ZP_09309226.1| hypothetical protein AK37_10716 [Rhodococcus pyridinivorans AK37]
gi|359734872|gb|EHK83840.1| hypothetical protein AK37_10716 [Rhodococcus pyridinivorans AK37]
Length = 440
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP +E+ ++FYR+W V + ++ +P F + ++G+ +V RD G + N
Sbjct: 40 YTDPEVFRVEMEKIFYRTWVWVAHESEIPEPGSFKTTQVGDQPVIVTRDRKGNFNTLLNR 99
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLEVA 155
CRH A++ SGK + F CPYH W+Y LDG L G + + K+F L L
Sbjct: 100 CRHRGATVCDQRSGKANGFTCPYHNWSYALDGRLRGIPYPDGYEGVIDKKDFPLQTLRTE 159
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
++ V ++A E+ + A W+ NG+ + + L ++ + NW
Sbjct: 160 SYLGMVWATFNQDAEPLEDFLGD--AKLWM--ERFFKQSNGLPTKV--LGVHKFRFKGNW 213
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGLQLDS 244
K+ +N D GYH P HK + + ++
Sbjct: 214 KIQLENTTD-GYHFPMVHKSWMASVDAET 241
>gi|399991714|ref|YP_006571954.1| dioxygenase [Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
gi|398656269|gb|AFO90235.1| putative dioxygenase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 412
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 158/388 (40%), Gaps = 52/388 (13%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
++Y DP L++ VFYR W +L F + ++G ++ R +G + AFH
Sbjct: 23 AFYNDPGVFDLDMREVFYREWLFAIPACELPKSGSFVTHQVGAYNVIIVRGVDGLVRAFH 82
Query: 96 NVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S++ G VCPYH WTY LDGTLL A + DFN + GL +
Sbjct: 83 NACRHRGSVVCKAKKGNTPKLVCPYHQWTYELDGTLLWARDMG--PDFNPSQHGLKTVHC 140
Query: 155 ATWGPFVLLNMGKEAVHQE---EVDSNVVANEWLGGSSEILSINGIDS---SLSYLCRRE 208
+ + + EA E ++ +A LG + + +++ L + RE
Sbjct: 141 RDLEGLIYICLADEAPDFEVFADLVRPYLAPHDLGNAKVAFESSIVENGNWKLVWENNRE 200
Query: 209 -YTIECNWKVFCDNYL----------DGGYHVPYAH------KGLASGLQLDSYSTSLYE 251
Y N C +Y DG H G+A+ QLD
Sbjct: 201 CYHCAGNHPSLCRSYPEDPAVTGVSEDGVPPKVQDHFDRIEAVGVAARFQLDQNRGQF-- 258
Query: 252 KVSIQRCESGSTEGTDDTHRLGSK-----------AIYAFIYPNFMINRYGPWMDTNLVI 300
+V+ G+ T D SK + F YP+ N + P D ++V
Sbjct: 259 RVARMPLLDGAVSFTMDGKAAVSKNLGKIPFADAGTLLQFHYPS-TWNHFLP--DHSIVF 315
Query: 301 ---PLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQM----EDIILCEGVQRGLES 353
P++PT +V + + KD + ++ LK +V + ED I+ E Q+G+ S
Sbjct: 316 CINPVSPTETEVTTKWLVH---KDAEEGVDYDLKRLTEVWIATNDEDRIVVEDNQQGINS 372
Query: 354 PAYCSGRYAPSVEQTMYHFHSLLHCNLT 381
P Y G Y+PS E + F LT
Sbjct: 373 PVYTPGPYSPSQESGVIQFGDWYASQLT 400
>gi|342888837|gb|EGU88055.1| hypothetical protein FOXB_01401 [Fusarium oxysporum Fo5176]
Length = 378
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 131/337 (38%), Gaps = 44/337 (13%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P+SWY + +E +F + W VV + + + DF F + +D G+I A
Sbjct: 22 PASWYRSSAMYEMERRAIFSKKWIVVSHQARFAEVGDFLRITQAGFTFFLIKDRQGEIRA 81
Query: 94 FHNVCRHHA-SILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
HNVCRH A ++ +G+ + C YHGW+YGLDG L KA + + F+ L P+
Sbjct: 82 HHNVCRHRAFPLVEQDAGRVNILSCKYHGWSYGLDGKLAKAPKYQEVPTFDKSTNNLYPI 141
Query: 153 EVATWG-PFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR-EYT 210
V F+ +NM V ++ G + D + + E
Sbjct: 142 HVHIDKLGFIWINMDASPT------PTVAWDDDFAGVDTQPRLQPFDMEAYHFDHQWEMI 195
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTH 270
+ NWK DNY + YH P H L + L Y + + S + + + D
Sbjct: 196 GDYNWKTLADNY-NECYHCPTGHPALNALTDLSKY----WVETSGGHIQHFNVDKPD--- 247
Query: 271 RLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSL 330
+ G F YPN I + + D+ F E S
Sbjct: 248 KDGMGIYSTFYYPNASIT--------------------------ISSNSASDEDFNEIS- 280
Query: 331 KDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQ 367
+Q+ ED LC Q+ L + + +G P VE+
Sbjct: 281 NCFKQILKEDKDLCNAAQKNLNAGIFVNGELHPRVEK 317
>gi|221197299|ref|ZP_03570346.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2M]
gi|221203972|ref|ZP_03576990.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2]
gi|421470462|ref|ZP_15918838.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia multivorans ATCC BAA-247]
gi|221176138|gb|EEE08567.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2]
gi|221183853|gb|EEE16253.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CGD2M]
gi|400227662|gb|EJO57649.1| ring hydroxylating alpha subunit, catalytic domain protein
[Burkholderia multivorans ATCC BAA-247]
Length = 427
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP+ EL R+FYR+W V + +L P DF + IG +V RD G+++ N
Sbjct: 28 YHDPALFEAELDRIFYRTWIWVAHDSELPRPGDFITTTIGRQPVIVVRDKTGEVNVLQNR 87
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVK-EFGLVPLEVA 155
CRH A++ G F CPYH W+Y LDGTL G + K + LV L V
Sbjct: 88 CRHRGATVCEAHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKGDLPLVKLRVG 147
Query: 156 TWGPFVL--LNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
+ + N G E + ++LGG+ ++ G + ++
Sbjct: 148 VYQGLIFASFNDGIEPL-----------EDFLGGAKPWIDLFMKQGAGYPIKANGEHKFR 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYST 247
+ NWK+ +N D YH P HK + ++ +T
Sbjct: 197 FKGNWKIQLENTTD-LYHFPVVHKSWMKSIDDETAAT 232
>gi|385209502|ref|ZP_10036370.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385181840|gb|EIF31116.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 427
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP+ EL R+FY++W V + +L +P DF + IG +V RD G ++
Sbjct: 26 SLYYDPAVFEAELERIFYKTWVWVAHESELPNPGDFCTTAIGRQPVIVVRDKTGAVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPLE 153
N CRH A++ G F CPYH WTYGLDG L G + + E L L
Sbjct: 86 NRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGALRALPYGDGYEGVIDKTELPLASLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + + +E E +LGG+ ++ G + +
Sbjct: 146 VGIYQGLIFASFNQEIEPLE---------AFLGGAKPWIDLFMKQGAGYPVKTNGEHRFR 196
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 197 FNGNWKIQLENTTD-LYHFPVVHK 219
>gi|152996679|ref|YP_001341514.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150837603|gb|ABR71579.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 424
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y DP +++ VF + W VG T ++ D+ + +G+ ++ RD G ++AFHN
Sbjct: 39 YNDPHMFRIDMEEVFQKEWLFVGMTSEIPKKGDYITVEVGQNPVLILRDGEGNVNAFHNT 98
Query: 98 CRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
CRH S+L T GK + VCPYH WTY L G LL A KDF+ K+ GL T
Sbjct: 99 CRHRGSVLCTEHRGKVANLVCPYHQWTYDLKGNLLFAG-TEMPKDFDNKQHGLKSAFCKT 157
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNWK 216
G F+ + +G+ A D V +E++ + ++S++ NWK
Sbjct: 158 GGGFIFVCLGETAPDDGFDDFLVTLDEYMEPYDVENTKLAVESTMYE--------RANWK 209
Query: 217 VFCDNYLDGGYHVPYAHKGLASGL 240
+ +N + YH +H L L
Sbjct: 210 LVLENNRE-CYHCAGSHPELLQTL 232
>gi|440231483|ref|YP_007345276.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
gi|440053188|gb|AGB83091.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
Length = 453
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 22/238 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
+TDP+ LE+ +F +W + + Q+ +P D+++ +G ++ RD +G++HA N
Sbjct: 36 FTDPAIFELEMKAIFEGNWVYMAHESQVAEPGDYYTLTMGRQPVIITRDKHGQLHAMINS 95
Query: 98 CRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKAT--RITG----IKDFNVKEFGLV 150
C H ++LA+ +G K+ F CP+HGWT+ G LLKA ++ G K + +
Sbjct: 96 CSHRGAMLASRKTGNKATFTCPFHGWTFNNAGNLLKAKDEKVGGYPPCFKQAGSHDLKHL 155
Query: 151 PLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILS--INGIDSSLSYLC-RR 207
P A++ F+ ++ + + E E+LG + ++L ++ + + L
Sbjct: 156 P-RFASYRGFLFGSLSDQVLPLE---------EYLGDTRQVLDLIVDQAEDGIEILTGAS 205
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEG 265
YT + NWK+ +N +D GYHV H S + S+ + + + C S ST G
Sbjct: 206 SYTYDGNWKLQMENGVD-GYHVSVVHWNYVSTMSRRSHDANSTQTLDAT-CWSKSTGG 261
>gi|456358949|dbj|BAM93324.1| putative Rieske dioxygenase alpha subunit [Sphingomonas sp. KSM1]
Length = 404
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 156/367 (42%), Gaps = 37/367 (10%)
Query: 23 PQIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFV 82
P+IP E+ +T F LE V+ R+W + G +L P F + I + +
Sbjct: 32 PEIPAER--------FTREDFFQLEKEHVWKRTWLLAGIACELPSPGSFKAVSINDAPVL 83
Query: 83 VCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF 142
+ R ++GKI AF+N C+H S+LA G G F C YH WTY L+G L +
Sbjct: 84 LARGEDGKIRAFYNTCQHRGSMLAKGEGTAQHFACSYHCWTYDLEGNLKFIPDERLFPNL 143
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ L P+ +G + +N + D++ +A E+LG +L +D+
Sbjct: 144 DKSRKSLKPIRCELFGALIFINF--------DGDASPLA-EFLGSILGVLQDMPLDNIKL 194
Query: 203 YLCRREYTIECNWKVFCDNYLDGGYHVPYAH----------KGLASGLQLDSYST-SLYE 251
Y + ++ + NWK+ +N+ + YH + H K A L + ++ ++
Sbjct: 195 Y-KKLQFEVPYNWKIVQENFSE-AYHTKFIHPTSLEPFIQTKARAGHLLANGHAALAIKS 252
Query: 252 KVSIQRCESGSTEGTDDT-HRLGSKAIY-AFIYPNFMINRYGPWMDTNLVIPLAPTRCKV 309
+ S+ + + + + L K+ I+PN ++ + P++ R ++
Sbjct: 253 RGSLTNLWASDVDDKEGVLNELTRKSQRNCNIFPNITLSPAENIFPVLVAWPISIQRTRL 312
Query: 310 VFDYFLDGSLKDDKAF---IEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVE 366
YFL D A E ++ E V ED EG+Q + S + R E
Sbjct: 313 DV-YFLTMPSSDQVASEPGYEATVAGLEVVLGEDFSALEGIQEAISSGGIEAVRLGWE-E 370
Query: 367 QTMYHFH 373
Q +YH H
Sbjct: 371 QIIYHHH 377
>gi|378827072|ref|YP_005189804.1| Rieske 2Fe-2S family protein [Sinorhizobium fredii HH103]
gi|365180124|emb|CCE96979.1| Rieske 2Fe-2S family protein [Sinorhizobium fredii HH103]
Length = 415
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+Y DP+F L+L ++YR W +G+ ++ +P ++ + ++G V+ R +GKI+A HN
Sbjct: 24 FYIDPAFYQLDLEHIWYRDWLFIGHDCEIPNPGNYLTVQVGAYSVVIVRGHDGKINALHN 83
Query: 97 VCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S + G + VCPYH WTY LDG LL A ++ +F+ F L P+
Sbjct: 84 SCRHRGSRVCQEHRGTAAKLVCPYHQWTYELDGKLLYARQMG--DNFDTSNFRLKPVACE 141
Query: 156 TWGPFVLLNMGKE 168
+ G ++ + + KE
Sbjct: 142 SAGGYIFVCLAKE 154
>gi|312195274|ref|YP_004015335.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311226610|gb|ADP79465.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 428
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 32 TPPSSW---YTD-------------PSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGR 75
TPP+ W Y D P F LE +F R+W VG +QL +F+
Sbjct: 6 TPPAKWTQRYPDLGTGLVSYEDSISPEFYELEREAIFRRAWLNVGRVEQLPRKGSYFTKE 65
Query: 76 --IGEVEFVVCRDDNGKIHAFHNVCRHHASIL-------ATGSGKKSWFVCPYHGWTYGL 126
+ + +V RD G+IHAFHNVCRH + L SG F+C YHGW YG+
Sbjct: 66 LAVAKTSLLVTRDLAGEIHAFHNVCRHRGNKLVWDHTPRTESSGVCRQFMCKYHGWRYGV 125
Query: 127 DGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG 186
DG L + DF+ +F LV + W FV +N+ + ++LG
Sbjct: 126 DGALKFVLQEEEFFDFDKADFPLVSVHCEVWEGFVFVNLAERPSQS--------LRDFLG 177
Query: 187 GSSEILSINGIDSSLSYLCRREYT----IECNWKVFCDNYLDGGYHVPYAH 233
+ G++ +LC Y I NWK+F D + + YH H
Sbjct: 178 P-----MVLGLEGYPFHLCGERYAFKSEISSNWKIFLDAFQE-YYHASVLH 222
>gi|359401796|ref|ZP_09194757.1| hypothetical protein NSU_4443 [Novosphingobium pentaromativorans
US6-1]
gi|357596851|gb|EHJ58608.1| hypothetical protein NSU_4443 [Novosphingobium pentaromativorans
US6-1]
Length = 455
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
++DP EL RVF R+W +G+ ++ + DF IGE F+V RDD G+I N
Sbjct: 31 FSDPDLYQAELRRVFTRTWVFLGHESEIPNRGDFVQRNIGEDPFIVIRDDKGEIRVLLNA 90
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKA-TRITGIKDFNVKEFGLVPL-EV 154
CRH A + +G FVCPYHGWTY G L + G + E+GL V
Sbjct: 91 CRHRGAHVCRVQAGNARMFVCPYHGWTYANSGKLSGVPVKNLGYAKLKLDEWGLYSAPNV 150
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSIN--GIDSSLSYLCR-REYTI 211
+ + N+ K+A+ E E+LG + L IN + + L + +
Sbjct: 151 TVYSGLIFANLNKDAISFE---------EYLGDFAWYLDINLHLSEGGMEVLGEPHRWLV 201
Query: 212 ECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK +N+ H H+
Sbjct: 202 DANWKQGAENFCGDSAHTQMTHR 224
>gi|433646762|ref|YP_007291764.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium smegmatis
JS623]
gi|433296539|gb|AGB22359.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium smegmatis
JS623]
Length = 452
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 9/209 (4%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
+TDP EL R+F SW + +TDQ P DFF+ +GE +V D N +I AF N
Sbjct: 50 FTDPQVYRQELRRIFASSWLFLAHTDQFHRPGDFFTTYMGEDPVIVTMDKNRRIRAFLNS 109
Query: 98 CRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPL-EV 154
CRH A + G F C YHGW Y L+G L+ G D F +++GLV + V
Sbjct: 110 CRHRGARVCRADYGATRSFTCTYHGWAYDLEGKLVSVPNKDGYPDSFRTEDWGLVEVPHV 169
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECN 214
A++ + N E V + ++ W + + + D ++ ++ +E N
Sbjct: 170 ASYRGLIFGNWDPEPVSLRDSLGDIA---WY---LDAMLDHDEDGTIVVGGVHKWVLEGN 223
Query: 215 WKVFCDNYLDGGYHVPYAHKGLASGLQLD 243
WK+ + + YHV +H + L D
Sbjct: 224 WKLAAEQFASDWYHVNMSHASALTVLSPD 252
>gi|87121995|ref|ZP_01077880.1| iron-sulfur cluster-binding protein, rieske family protein
[Marinomonas sp. MED121]
gi|86162793|gb|EAQ64073.1| iron-sulfur cluster-binding protein, rieske family protein
[Marinomonas sp. MED121]
Length = 404
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 167/372 (44%), Gaps = 44/372 (11%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y D +L +++++ W G+T ++ ++ + ++G+ VV RDD+G++ AFHN
Sbjct: 25 YRDEDVYQQDLEQIWHKEWIFAGHTIEINKAGEYITLQVGDYPVVVVRDDSGEVRAFHNA 84
Query: 98 CRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
CRH S + + GK + VCPYH WT+GLDG L+ A + ++FN + GL+P+
Sbjct: 85 CRHRGSRVCSAAKGKAAKLVCPYHKWTFGLDGKLIYAGNMG--ENFNNDDHGLMPVHCEV 142
Query: 157 WGPFVLLNMGKEAVHQEEVDSNV--------VANEWLGGSSEILSINGIDSSLSYLCRRE 208
++ + + +EA E+ +V + + + S I + + L + RE
Sbjct: 143 VNSYIYICVAEEAPDFEQFRKDVSPFITPHNLEDAKVAHESNI--VEDGNWKLVFENNRE 200
Query: 209 -YTIECNWKVFCDNYLD-------GGYHVP--YAH------KGLASGLQLDSYSTSLYEK 252
Y + N +++++ GG P AH GL S L +D +
Sbjct: 201 CYHCDANHPELLNSFVENLSVAGVGGDDDPELVAHWDKCEAAGLPSRLVMDEGGQYRMTR 260
Query: 253 VSIQ-RCESGSTEGT-------DDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
+ + + S + +G D+T A+ F YP+ + G + + ++PL
Sbjct: 261 IPLSAKAVSYTMDGKPAVKGRLDNTDVEDIGALLYFNYPSTWNHFLGDYALSFRILPLNS 320
Query: 305 TRCKVVFDYFLDGSLKDDKAFIEQSLKDSEQVQME----DIILCEGVQRGLESPAYCSGR 360
+ V + + KD ++ L++ +V +E D L E RG+ SP+Y G
Sbjct: 321 GQTLVTTKWLVP---KDAVEGVDYDLENLIKVWIETNNQDKELVEETFRGVSSPSYIPGP 377
Query: 361 YAPSVEQTMYHF 372
++ E + F
Sbjct: 378 FSDIAENGVCQF 389
>gi|111017430|ref|YP_700402.1| ring hydroxylating diooxygenase [Rhodococcus jostii RHA1]
gi|110816960|gb|ABG92244.1| ring hydroxylating diooxygenase [Rhodococcus jostii RHA1]
Length = 389
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
+TDP+ E +F R +V + ++ DFF+ ++ +V R +G + F N+
Sbjct: 38 FTDPAIAKRERDLIFGRVPSIVAHGSEIPRSGDFFTLQMPRNNIIVVRQRDGGVKTFVNL 97
Query: 98 CRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVAT 156
CRH ++L G+ F CPYH W+Y DGTL TR D + GLV L
Sbjct: 98 CRHRGALLEKEEKGRCRLFSCPYHRWSYDTDGTLRTITRDNTFGDPDTTSMGLVELPTEE 157
Query: 157 WGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSE-ILSINGIDSSLSYLCRREYTIECNW 215
F+ + +E ++ + WLG + ILS +DS ++ + + NW
Sbjct: 158 RHGFIWV--------VDEANAEIDVAGWLGNEMDAILSGYDLDSKIA-VQSEGFDEPVNW 208
Query: 216 KVFCDNYLDGGYHVPYAHKGLAS 238
K+ D +LD GYH+ YAH A+
Sbjct: 209 KIMQDAFLD-GYHIQYAHPNTAA 230
>gi|30844214|gb|AAP35717.1| unknown [Pseudomonas aeruginosa]
Length = 511
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 160/377 (42%), Gaps = 78/377 (20%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ YT+P LALE R+F R W VG++ +++ FF+ +I V VV R ++G I AF
Sbjct: 143 AAHYTEPQTLALERERLFGRLWIFVGFSSMVRERNQFFTRKIAGVPVVVQRTESG-IRAF 201
Query: 95 HNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE---FGLVP 151
N C H S + T + VCPYH W++G +G L+ + + F+ +E GL
Sbjct: 202 LNQCPHRLSAIQTECTGQRPLVCPYHAWSFGAEGQ-LQGIPNSSLYQFSAEERARIGLRK 260
Query: 152 LEVATWGPFVLLNMGKEAVH-QEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYT 210
L + + +N+ + + +E+ D +L E+ S +D+ L Y C +
Sbjct: 261 LHLEEVEQLLFVNLADDPLPLREQFDDG-----FLETLREVSS--HLDTRLIYSC---HK 310
Query: 211 IECNWKVFCDNYLDGGYHVPYAH------------KGLASGLQLDS-------------- 244
+ NWK+ +N D HVP+ H +GLA + S
Sbjct: 311 VRYNWKLNMENVKDYN-HVPFVHPKTFLPVMTAPVRGLAREAAVPSEVLRLLQEGETPEL 369
Query: 245 YSTSLYEKVSIQRCESGST---EGTDDTHRLGSKAIYA-FIYPN----------FMINRY 290
S S K IQ +S + EG D H A Y FIYPN F++ +Y
Sbjct: 370 RSLSFPTKAPIQPYKSWFSDLCEGYGDEH-----AYYNWFIYPNVNFCSVRGEHFLLQQY 424
Query: 291 GPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDK----AFIEQSLKDSEQVQMEDIILCEG 346
P+AP + + KD K A + ++ V ED ++ E
Sbjct: 425 D---------PVAPGETDYHL-WMMTARRKDPKTDFSALLSTLIRGERNVIGEDTLVLER 474
Query: 347 VQRGL--ESPAYCSGRY 361
+Q GL SP + G Y
Sbjct: 475 LQEGLGAHSPPFMHGDY 491
>gi|433774161|ref|YP_007304628.1| Rieske (2Fe-2S) domain-containing protein [Mesorhizobium
australicum WSM2073]
gi|433666176|gb|AGB45252.1| Rieske (2Fe-2S) domain-containing protein [Mesorhizobium
australicum WSM2073]
Length = 353
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 34/360 (9%)
Query: 32 TPPSSWYT-DPSFLAL------ELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
TPP + DPS E +F +WQ +G + + + I
Sbjct: 15 TPPVQYLNLDPSLYVRDDIWQQERGNIFAHTWQFMGPVASVATSGQYLAIDIAGTPIFAI 74
Query: 85 RDDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
R +G + F NVCRH A +LA G GK VCPYH W++ G L++A
Sbjct: 75 RGRDGTLRGFKNVCRHRGAKLLADGEGKCGLIVCPYHKWSFADTGRLVQAPWYGKDPAII 134
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL-S 202
+++ L ++++ W + + + E++ S L D L +
Sbjct: 135 AEDWPLETVQLSEWRGLLFAALDPKESLLEQLGS--------------LPAELADEPLET 180
Query: 203 YLCRREYTIE--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCES 260
Y + T+ NWK++ DN+++ GYH+P H + + +++ T+ + R +
Sbjct: 181 YAATDQATVSFAANWKIYTDNFVE-GYHIPGTHPSFYAAIDFEAFQTTAHP--GYVRMTA 237
Query: 261 GSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLK 320
+G L + + +++PN+ ++ + M+ + + P +P + +F +
Sbjct: 238 PPKDG------LFYRGKWLWMWPNWTLSLFDGGMNVSRINPTSPHHTDQHYHFFFADTSA 291
Query: 321 DDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNL 380
+ +S++ + V ED +C R + AY SG + E+ + +F + L
Sbjct: 292 EATESRAKSVQGTLAVVREDYSICADTHRNYAAGAYSSGPLSGRHERGVQYFQERVAAAL 351
>gi|404398106|ref|ZP_10989690.1| anthranilate 1,2-dioxygenase, large subunit [Pseudomonas
fuscovaginae UPB0736]
Length = 462
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P+E +T+P LE+ +F + W + ++ +P DF + R G ++ R
Sbjct: 21 PVEGIYRVARDIFTEPELFDLEMELIFEKQWIYACHESEIANPNDFITMRAGRQPMIITR 80
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D +G++HA N C+H A++ G+G +S F CP+H W Y DG L+K + F+
Sbjct: 81 DSHGELHALINACQHRGATLTRQGAGNQSTFTCPFHAWCYKSDGRLVKVKAPGEYPEGFD 140
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSS 200
GL + ++ FV +++ A E ++LG + +++
Sbjct: 141 KATRGLRKARIESYKGFVFISLDTHASDSLE--------DFLGDARIFFDMMVAQSPTGE 192
Query: 201 LSYLC-RREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
L L + YT + NWK+ +N LD GYHV H S +Q
Sbjct: 193 LEVLAGKSTYTYDGNWKLQNENGLD-GYHVSTVHYNYVSTVQ 233
>gi|126640903|ref|YP_001083887.1| dioxygenase subunit alpha [Acinetobacter baumannii ATCC 17978]
Length = 287
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 97 VCRHHASILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
+C H L +GSGK K+ CPYH WT+ LDG+L A ++ F+ + +VPL+V
Sbjct: 1 MCPHRGHELLSGSGKAKNVITCPYHAWTFKLDGSLALARNCDHVESFDKENSSMVPLKVE 60
Query: 156 TWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIECNW 215
+ FV +NM + A V ++ G + + G+ L R NW
Sbjct: 61 EYAGFVFINMDENAT--------CVEDQLPGFAERLNQACGVIKDLKLAARFVTETPANW 112
Query: 216 KVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDTHRLGSK 275
KV DNY++ YH AH G A +Q+D Y + ++ ++Q + S+E + K
Sbjct: 113 KVIVDNYME-CYHCGPAHPGFADSVQVDKYWHTTHQNWTLQYGFARSSEKS-------FK 164
Query: 276 AIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDG--SLKD-DKAFIEQSLKD 332
+ P F + + W T +P V++++ +D +L+ D F + L
Sbjct: 165 LDPSVTDPEF--HGFWTWPCTMFNVPPGSNFMTVIYEFPVDAETTLQHYDIYFTNEELTQ 222
Query: 333 SEQ---------VQMEDIILCEGVQRGLESPAY 356
++ + ED+ L E VQRGL+S Y
Sbjct: 223 DQKDLIEWYRNVFRPEDLNLVESVQRGLKSRGY 255
>gi|421850553|ref|ZP_16283508.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus NBRC
101655]
gi|371458619|dbj|GAB28711.1| ring hydroxylating dioxygenase [Acetobacter pasteurianus NBRC
101655]
Length = 421
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y++ +E+ R+F +W V + +L +P +F + +G +V RD G +H
Sbjct: 19 SIYSNSDLYDMEMDRIFMHNWIWVAHRSELPEPGEFITTFVGSHPVIVSRDRQGVVHVML 78
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITG-IKDFNVKEFGLVPLE 153
N CRH A++ GK + FVCPYHGW YGLDG L G + + LV L
Sbjct: 79 NRCRHRGATVCEQKHGKAASFVCPYHGWAYGLDGALRGVPHQDGYTGQLDKSKLPLVNLR 138
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYT 210
V + + K + E +WLG + ++ G + + ++T
Sbjct: 139 VEEYNGLIFATFDKSIMSLE---------DWLGRAKPWIDLFMKQGAYWPIKTMGEHKFT 189
Query: 211 IECNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 190 FPGNWKIQLENTTD-AYHFPIVHK 212
>gi|170690770|ref|ZP_02881936.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144019|gb|EDT12181.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 427
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP EL R+FY++W V + +L P DF + IG +V RD G ++
Sbjct: 26 SLYYDPQLFEEELERIFYKTWVWVAHDSELPKPGDFVTTTIGRQPVIVVRDKTGAVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH A++ G F CPYH W+Y LDGTL G + V E G +PL+
Sbjct: 86 NRCRHRGATVCEEHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYE--GVCEKGDLPLKK 143
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYTI 211
G + L A E ++S ++LGG+ ++ G + ++
Sbjct: 144 LRVGVYQGLIF---ASFNENIES---LEDFLGGAKPWIDLFMKQGAGYPIKANGEHKFKF 197
Query: 212 ECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 198 KGNWKIQLENTTD-LYHFPVVHK 219
>gi|152997959|ref|YP_001342794.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150838883|gb|ABR72859.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 423
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 158/388 (40%), Gaps = 44/388 (11%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P +L P Y DP +++ +F + W VG T ++ + D+F+ I + ++ R
Sbjct: 29 PANYSLDAP--LYNDPHMFRVDVEEIFQKEWLFVGMTSEVPNRGDYFTVEIAQNPVLIVR 86
Query: 86 DDNGKIHAFHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
D +G ++AFHN CRH S + GK + VCPYH WTY L G LL A G F+
Sbjct: 87 DADGSVNAFHNTCRHRGSRVCLEHRGKVANLVCPYHQWTYDLKGNLLFAGTEMG-DSFDK 145
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLG----GSSEILSINGIDSS 200
+ GL T G F+ +++GKE + + E++ ++++++ + +
Sbjct: 146 SQHGLKKAHCKTAGGFIFISLGKEEPQGDFDEFLATLEEYMAPYDVENTKLVAESNMYEK 205
Query: 201 LSYLCRREYTIEC---------------NW---------KVFCDNYLDGGYH-----VPY 231
++ E EC W + F D+Y D +P+
Sbjct: 206 ANWKLVLENNRECYHCVGSHPELLNTILEWDDTNDPRAPQDFLDHYADQAAKWDEEGIPH 265
Query: 232 AHKGLASGLQLDSYSTSLYE--KVSIQRCESGSTE--GTDDTHRLGSKAIYAFIYPNFMI 287
H+ G + L + KV E+G + G LGS I PN
Sbjct: 266 EHRSFGPGKRNRIVRMPLKKGTKVMTIDGEAGCKKLLGNIKNPELGSMRILHL--PNSWN 323
Query: 288 NRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQSLKDS-EQVQMEDIILCEG 346
+ V+P++ V +F+ + + + L+ + +D IL E
Sbjct: 324 HMQSDHFIVFRVLPISAQESIVTTKWFVHKDAVEGEDYDPNRLRYVWDATNDQDRILGEE 383
Query: 347 VQRGLESPAYCSGRYAPSVEQTMYHFHS 374
QRG+ S Y +G Y+ + E + +F
Sbjct: 384 NQRGINSIGYQAGPYSETFEFGVMNFQE 411
>gi|399059484|ref|ZP_10745130.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
gi|398039423|gb|EJL32559.1| ring-hydroxylating dioxygenase, large terminal subunit
[Novosphingobium sp. AP12]
Length = 412
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 154/375 (41%), Gaps = 33/375 (8%)
Query: 24 QIPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVV 83
Q + +A++ P YT P++ E V+ R W VG+ + D D+F+ I +V
Sbjct: 29 QGDVSQAMSLPPECYTSPAWFEFEKRAVYDREWVAVGHIGAIPDVGDYFTLEIVGEPLLV 88
Query: 84 CRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF- 142
R + ++ +VCRH +L SG F CP+HGW+Y L+GTL A + G F
Sbjct: 89 VRGKDSEVRVLSSVCRHRGHLLGEASGNAKNFTCPFHGWSYDLEGTLTGAPEMEGTLPFA 148
Query: 143 NVKEFGLVP-LEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
+K +P W F+ +N EA +A L G + +L + ++
Sbjct: 149 ELKHTACLPAFRSEIWNGFIFVNFDGEA--------EALAPR-LKGLTTLLQNHHMEDLA 199
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL-----ASGLQLDSYSTS----LYEK 252
S + + NWK +N L+ YH Y H G+ +S + + + +Y +
Sbjct: 200 SIKPVEWASNKWNWKFMQENALE-PYHTHYLHTGIHDFAPSSNTRFTEWDETDDGAIYRE 258
Query: 253 VSIQRCESGSTEG--------TDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAP 304
V + G D T S+ ++A + PN + + +++P A
Sbjct: 259 VEFMHIDGGFNIAGKALFPALPDLTEAERSRVVFAGVMPNLFLGAQADVVFYYVILPQAA 318
Query: 305 TRCKV---VFDYFLDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRY 361
+ V + + SL ++ ++ +D + +G+ S R+
Sbjct: 319 GDITLRVGVLTSWDNLSLPTADLLLKGTIDGVAVFNEQDTVANIRTHKGMSSRVAPRTRW 378
Query: 362 APSVEQTMYHFHSLL 376
+P+ E+T+ ++ L
Sbjct: 379 SPN-EKTLAQINNWL 392
>gi|167615006|ref|ZP_02383641.1| benzoate 1,2-dioxygenase, alpha subunit [Burkholderia thailandensis
Bt4]
Length = 427
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y D EL R+FYR+W V + +L +P DF + IG +V RD NG ++
Sbjct: 26 SMYYDAELFEAELERIFYRTWIWVAHDSELPNPGDFVTTTIGRQPVIVVRDRNGDVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDF-NVKEFGLVPLE 153
N CRH A++ G F CPYH W+Y LDGTL G + + + LV L
Sbjct: 86 NRCRHRGATVCEAHRGNAKGFTCPYHSWSYALDGTLRALPYGDGYEGVCDKADLPLVKLR 145
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
T+ V + ++ E +D + A W+ ++ G + + +
Sbjct: 146 TGTYQGLVFASFNQDI---EPLDDFLGAAKPWI----DLFMKQGAGYPIKANGGHRFRFK 198
Query: 213 CNWKVFCDNYLDGGYHVPYAHK 234
NWK+ +N D YH P HK
Sbjct: 199 GNWKIQLENTTD-LYHFPVVHK 219
>gi|407644562|ref|YP_006808321.1| putative dioxygenase [Nocardia brasiliensis ATCC 700358]
gi|407307446|gb|AFU01347.1| putative dioxygenase [Nocardia brasiliensis ATCC 700358]
Length = 381
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 148/367 (40%), Gaps = 27/367 (7%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P ALT P S Y+ P LE +F RSW + + DQL P D+ + I VV R
Sbjct: 22 PEPPALTLPPSAYSSPELWELERELIFRRSWILAAHVDQLARPGDYVALSIAGEPVVVSR 81
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNV 144
+G++ A ++CRH ++ G+G F C YH W YGLDG L A + G +DF
Sbjct: 82 AQDGELRAMSSICRHRLMPLVEPGAGHTDSFTCRYHLWKYGLDGKLRGAPYMGGNQDFAP 141
Query: 145 KEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDS-SLSY 203
K L +A W V +N+ A E + ++ + + +DS SL +
Sbjct: 142 KLCRLPQFALAEWNGLVWINLDAAA---EPIGEHLDRAAAQFDGYRLGEMVQVDSWSLEW 198
Query: 204 LCRREYTIECNWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLDSYST-SLYEKVSI 255
+ NWK+ +N + YHV H+ S + ++ YS L+ ++ +
Sbjct: 199 --------QVNWKLVMENGHE-NYHVIGLHRETLEPFMPGGSDIHVEHYSPWVLHARIPL 249
Query: 256 QRCESGSTEGTDDTHRLGSKAIYAFIYPNFM-INRYGPWMDTNLVIPLAPTRCKVVFDYF 314
++ R + F F+ I W P A R +V+
Sbjct: 250 ALPVEPEAVRLNEIQRNNGMLLLGFPVSAFIAIGDQVVWFS---FTPTAIDRVQVIGGVL 306
Query: 315 LDGSLKDDKAFIEQSLKD-SEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFH 373
L D + ++ + + + ED E VQRG+ + G +P + + F+
Sbjct: 307 TLPELATDSEALRRTQQAVTMMINDEDRDGLEAVQRGVAAQFTARGHLSPKEQPGILAFY 366
Query: 374 SLLHCNL 380
L L
Sbjct: 367 RNLATAL 373
>gi|367469025|ref|ZP_09468796.1| putative dioxygenase hydroxylase component [Patulibacter sp. I11]
gi|365815920|gb|EHN11047.1| putative dioxygenase hydroxylase component [Patulibacter sp. I11]
Length = 442
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S YTDP+ E+ R++YR+W VG+ ++ P D+ IG ++ RD G+IH
Sbjct: 25 SLYTDPAIFDAEMERIWYRTWVYVGHESEVPQPNDYVVKSIGPQPIIMSRDKQGEIHLLL 84
Query: 96 NVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKE-FGLVPL- 152
N C H A+++ + G S F CPYHGWT+ G LL +G K GL +
Sbjct: 85 NRCTHRANLVCDAAKGNSSAFRCPYHGWTFSNTGKLLGYPFNSGYGGTEEKRNLGLGRVA 144
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS-------EILSINGIDSSLSYLC 205
VA++ FV + +E E E LGG++ E+ +D S +L
Sbjct: 145 RVASYQGFVFGSFAEEGPTLE---------EHLGGATDAFDRLVELSPTGKLDISAGWL- 194
Query: 206 RREYTIECNWKVFCDNYLDGGYHVPYAHKGLAS 238
++ + NWK+ +N D GYH + H + S
Sbjct: 195 --QHEAKANWKMLVENETD-GYHPQFVHASIFS 224
>gi|295700680|ref|YP_003608573.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439893|gb|ADG19062.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 427
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP +EL R+FY++W V + +L P DF + IG +V RD +G ++
Sbjct: 26 SLYYDPDLFEVELERIFYKTWIWVAHDSELPKPGDFITTTIGRQPVIVVRDKSGAVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH A++ G F CPYH W+Y LDGTL G + V E G +PL+
Sbjct: 86 NRCRHRGATVCEEHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYE--GVCEKGDLPLKK 143
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYTI 211
G + L A E ++ ++LGG+ ++ G + ++
Sbjct: 144 LRVGVYQGLIF---ASFNETIEP---LEDFLGGAKPWIDLFMKQGAGYPIKANGEHKFKF 197
Query: 212 ECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 198 KGNWKIQLENTTD-LYHFPVVHK 219
>gi|94495228|ref|ZP_01301809.1| [2Fe-2S] protein [Sphingomonas sp. SKA58]
gi|94425494|gb|EAT10514.1| [2Fe-2S] protein [Sphingomonas sp. SKA58]
Length = 404
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 18/227 (7%)
Query: 30 ALTP-PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDN 88
AL P P+ YTDP F ALE R++ R+W + G L P + + + ++ +
Sbjct: 28 ALPPIPAGRYTDPRFEALEKDRLWNRTWLLAGIASDLPAPGSYRLFQHLDRSVILSHGKD 87
Query: 89 GKIHAFHNVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G+I AFHN CRH S +L G+ F+CPYH W Y L+GTL + E
Sbjct: 88 GRIRAFHNACRHRGSPLLLEPQGRAMRFICPYHAWGYDLEGTLKSVPSQHDFACLDKAEN 147
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GL+ ++ T+ F+ +N +A E N + E +++ + +
Sbjct: 148 GLIEVKCDTYRGFIFINFDDDA----EPLQNFLG--------EFVALTEGYPLERMVVKD 195
Query: 208 EYTIE--CNWKVFCDNYLDGGYHVPYAHK-GLASGLQLDSYSTSLYE 251
+ +E CNWK+ N+L+ YHV H LA L S+ +LYE
Sbjct: 196 HFFVEMACNWKIAYHNFLE-IYHVNTVHPTTLAPHLDSRSFVIALYE 241
>gi|417550187|ref|ZP_12201267.1| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
[Acinetobacter baumannii Naval-18]
gi|417567577|ref|ZP_12218449.1| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
[Acinetobacter baumannii OIFC143]
gi|395553249|gb|EJG19257.1| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
[Acinetobacter baumannii OIFC143]
gi|400388155|gb|EJP51228.1| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
[Acinetobacter baumannii Naval-18]
Length = 467
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 105/221 (47%), Gaps = 37/221 (16%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
YTDP LEL RVF R W + + Q+ DFF+ +GE +V R +G I A N
Sbjct: 26 YTDPQLYELELERVFGRCWLFLCHESQIPKSGDFFNTYMGEDPIIVIRQKDGSIKALLNQ 85
Query: 98 CRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGI--------KDFNVKEFG 148
CRH + ++ G F CPYHGW+YG+DG+ LK + G+ +++ ++E
Sbjct: 86 CRHRSMRVSYADCGNTRAFTCPYHGWSYGIDGS-LKDIPLEGVAFPHGACKEEWGLQEVP 144
Query: 149 LVP----LEVATWG---PFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
V L W P +L MG A + +D+ + E G SE+ I GI
Sbjct: 145 RVASYKGLVFGCWADDTPELLDYMGDIAWY---LDAMIDRRE---GGSEV--IGGI---- 192
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQL 242
++ I CNWK + + YH PY+H AS +Q+
Sbjct: 193 -----HKWEINCNWKFAAEQFASDQYHAPYSH---ASAVQV 225
>gi|111018807|ref|YP_701779.1| dioxyenase [Rhodococcus jostii RHA1]
gi|110818337|gb|ABG93621.1| probable dioxyenase [Rhodococcus jostii RHA1]
Length = 390
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 27/367 (7%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTD E +F W L DP F +G ++ R +G++ AF N
Sbjct: 27 YYTDADIFTDEQENLFEAMWFCAVRAADLADPGAFRKITVGRESVLLVRGRDGELRAFLN 86
Query: 97 VCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK-----DFNVKEFG 148
+CRH ++L T G +++ CPYH WTYGLDG L+ A + ++ D + +G
Sbjct: 87 ICRHRGAMLCTEDEGQIRRN-LQCPYHAWTYGLDGKLVAAPNMAALRDETGADIDRVRYG 145
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR- 207
LVP+ + W + + + E E+ V E LG + +I+ L RR
Sbjct: 146 LVPVALREWLGYAWVCLADEPPSFEDEVVGAV-TERLGDPA---AIDRYQIGTLELGRRI 201
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLD---SYSTSLYEKVSIQR 257
Y + NWK+ +N+++ YH H L A GL + + + V
Sbjct: 202 VYDVAANWKLIIENFME-CYHCATIHPELTEVLPEFADGLAAQYFVGHGAAFGDDVEGFT 260
Query: 258 CE-SGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL 315
+ SG E + YA I P +N + + + P++ R V D+
Sbjct: 261 IDGSGGFESLSGISEDQDRKYYAITIRPQVFVNLVPDHVIFHRMYPVSADRTIVECDWLY 320
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
+ + +S++ +V +D CE Q + S AY +G E + FH
Sbjct: 321 SPEVTASGRDVSRSVELFHRVNQQDFDACERTQPTMASKAYRNGGVLVPAEHHIGEFHEW 380
Query: 376 LHCNLTN 382
L L+
Sbjct: 381 LLERLSG 387
>gi|119505787|ref|ZP_01627854.1| Bacterial ring hydroxylating dioxygenase, alpha
subunit:Immunoglobulin/major histocompatibility [marine
gamma proteobacterium HTCC2080]
gi|119458354|gb|EAW39462.1| Bacterial ring hydroxylating dioxygenase, alpha
subunit:Immunoglobulin/major histocompatibility [marine
gamma proteobacterium HTCC2080]
Length = 418
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 46 LELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNVCRHHAS-I 104
LEL + ++SW +T ++ + D+ IGE +V R +G I A HN+CRH S +
Sbjct: 43 LELEHLVFKSWIYALHTSEIPNVGDYQLLEIGEDAIIVVRTTDGSIKAMHNICRHRGSRV 102
Query: 105 LATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVATWGPFVLLN 164
+G + FVCPYHGW Y LDG+L A + DF+ + GL + + V +N
Sbjct: 103 CEATTGNRKTFVCPYHGWVYDLDGSLKAARETHIMPDFDKTQLGLKAVRCVEYMGMVFIN 162
Query: 165 MGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE-YTIECNWKVFCDNYL 223
A +++VA+ + + D + + + R+ Y ++ NWK+ +NYL
Sbjct: 163 CDPNA-------ADLVASL----DKMRIPLGAYDLANAKVAHRQTYRVQANWKLAIENYL 211
Query: 224 DGGYHVPYAHKGLA 237
+ YH +H+ A
Sbjct: 212 E-CYHCATSHRAYA 224
>gi|400537712|ref|ZP_10801234.1| hypothetical protein MCOL_V225027 [Mycobacterium colombiense CECT
3035]
gi|400328756|gb|EJO86267.1| hypothetical protein MCOL_V225027 [Mycobacterium colombiense CECT
3035]
Length = 400
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 126/295 (42%), Gaps = 28/295 (9%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
E+ L P +Y DP +E ++ R + + Q+ + D+ + +V RD
Sbjct: 43 ERELRVPLHYYRDPKITEIEESQILRRVPLAIVPSAQVANKNDYVVRSVLGDSLLVTRDR 102
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
G H N CRH ++ A GSG S FVCPYH WTY G L G + K +
Sbjct: 103 TGASHVLLNYCRHRGAMPACGSGNASRFVCPYHAWTYRNTGELFSVPGRAGFDSMDFKAY 162
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
GLV L F+ + D+ + + LG L++ + S Y +R
Sbjct: 163 GLVELPSEERHGFIWAVL--------TADATIDLDAHLGDFGTELALWNYE-SYGYHTQR 213
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAH-------KGLASGLQLDSYSTSLYEKVS-----I 255
E+T E +WK + + + GYH PY H LA+ + D + + ++ I
Sbjct: 214 EFTSEVSWKGALEAFAE-GYHFPYVHGESLIGQNTLANTMVYDEFGK--HHRIGFPFTWI 270
Query: 256 QRCESGSTEGTDDTHRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLA-PTRCKV 309
++ + D + +G IY ++YPN ++ ++ ++P PTRC V
Sbjct: 271 TDADTDPSASLDPSTNMG--VIY-WVYPNLILANSPVGVEIIDMLPAGEPTRCTV 322
>gi|357025742|ref|ZP_09087857.1| dioxygenase alpha subunit [Mesorhizobium amorphae CCNWGS0123]
gi|355542374|gb|EHH11535.1| dioxygenase alpha subunit [Mesorhizobium amorphae CCNWGS0123]
Length = 400
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y + L LE VF WQ+ G+ + + D+ + + ++ R +G + AF+N+
Sbjct: 24 YHSSALLELEREYVFRNHWQIAGHVSDVPNAGDYLTMDVVGERALIVRGKDGVVRAFNNM 83
Query: 98 CRHHAS-ILATGSGK-KSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEVA 155
CRH S ++A G K+ VCP+HGW Y LDGTL A R D + EFGL+PL++
Sbjct: 84 CRHRGSRVVADSQGTCKNALVCPFHGWVYNLDGTLRGAARPRSFPDLDKTEFGLMPLDLE 143
Query: 156 TWGPFVLLNMGKEAVHQE--EVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIEC 213
W F+ + K E+ + A +E++ GI + S
Sbjct: 144 IWMGFIFIRFRKGGPQPSVAELLKPIEAEMAHYNVAEMVPSWGIWTQKS---------PV 194
Query: 214 NWKVFCDNYLDGGYHVPYAHKGL 236
NWK D + GYHV AH L
Sbjct: 195 NWKSVRD-VDNEGYHVAMAHPAL 216
>gi|302887153|ref|XP_003042465.1| hypothetical protein NECHADRAFT_55718 [Nectria haematococca mpVI
77-13-4]
gi|256723376|gb|EEU36752.1| hypothetical protein NECHADRAFT_55718 [Nectria haematococca mpVI
77-13-4]
Length = 387
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 153/353 (43%), Gaps = 25/353 (7%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y +P F LE +F +SW ++ ++ Q +P + + F + RD ++AF NV
Sbjct: 1 YREPGFYELERRAIFSKSWILISHSCQFNEPGKYARYEMAGYPFFIIRDRARSVNAFLNV 60
Query: 98 CRHHA-SILATGSGKKSWFVCPYHGW----TYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
CRH A I+ +GK C YHG +Y ++G L KA R ++ F ++ L +
Sbjct: 61 CRHRAFPIVHEDAGKVMVLSCKYHGMSRLKSYSMNGNLAKAPRFDQVEGFQKDDYKLYKV 120
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVA-NEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ ++G V+ + + ++ E GG + ++ D S +Y +++
Sbjct: 121 HTH------IDDLGFLWVNLDATEKPTLSWEEQFGGVDKQPRLSNFDMS-NYEYDHTWSM 173
Query: 212 E--CNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDDT 269
E NWK +NY + YH P AH GLA + + K ++ E +
Sbjct: 174 EGKFNWKTLIENY-NECYHCPTAHPGLAPFFRNNRQMVYGCHKYWVEHLGGKGEERS--- 229
Query: 270 HRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAFIEQS 329
S +++PN + + ++P + T + ++ + + ++ +++
Sbjct: 230 ----SSVSPTYMFPNASVTLTPVFFYMMSIVPTSATTSLMRYEVYRAKNATKEQ--LQEK 283
Query: 330 LKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSLLHCNLTN 382
L QV+ ED L G Q L + Y +G + P VEQ + + L+ L N
Sbjct: 284 LDFFAQVEGEDKWLANGSQANLNNDTYTTGPFHPDVEQGVTYITGLVKKILHN 336
>gi|443471586|ref|ZP_21061648.1| Benzoate 1,2-dioxygenase [Pseudomonas pseudoalcaligenes KF707]
gi|442901657|gb|ELS27477.1| Benzoate 1,2-dioxygenase [Pseudomonas pseudoalcaligenes KF707]
Length = 403
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 149/381 (39%), Gaps = 54/381 (14%)
Query: 34 PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHA 93
P + Y+DP +L +++++ W G+T +L+ P + + +IG+ V R +G++ A
Sbjct: 21 PRALYSDPDVYRQDLEQIWHKEWIFAGHTFELEKPGQYLTLQIGDYPIAVVRGGDGQVRA 80
Query: 94 FHNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPL 152
FHN CRH S + T SGK + VCPYH WT+ LDG LL A + +FN ++GL P
Sbjct: 81 FHNACRHRGSKVCTESSGKVAKLVCPYHKWTFDLDGKLLFAGNMG--PEFNAADYGLKPA 138
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
++ + + +A V S I N D +++
Sbjct: 139 HCQVVNSYIYVCVADQAPDFTRFRDAV--------SPFITPHNLDDCKVAF--ESNLVER 188
Query: 213 CNWKVFCDNYLD------------------------GGYHVP--YAH------KGLASGL 240
NWK+ +N + GG P AH GL S L
Sbjct: 189 GNWKLVFENNRECYHCDGTHPELLNSFVENLSVAGVGGEEDPELVAHWNRCEAAGLPSRL 248
Query: 241 QLDSYSTSLYEKV-----SIQRCESGSTEGTDDTHRLGSKAIYA---FIYPNFMINRYGP 292
+D ++ ++ G R G I A F YP+ + G
Sbjct: 249 VMDEAGQFRMTRIPLSAGAVSYTMDGKPAVAGRLDRSGEADIGALLYFNYPSTWNHFLGD 308
Query: 293 WMDTNLVIPLAPTRCKVVFDYFLDGSLKDDKAF-IEQSLKDSEQVQMEDIILCEGVQRGL 351
+ V+P P V + + K+ + IE+ K +D L E Q G+
Sbjct: 309 HALSFRVLPQGPNETLVTTKWLVPKDAKEGIDYDIERLTKVWIATNDQDRRLVENSQAGV 368
Query: 352 ESPAYCSGRYAPSVEQTMYHF 372
SPAY G Y+ E + F
Sbjct: 369 SSPAYEPGPYSSIAENGVCQF 389
>gi|116050456|ref|YP_790725.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421174345|ref|ZP_15632075.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
CI27]
gi|115585677|gb|ABJ11692.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404534399|gb|EKA44135.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
CI27]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + +L P DF + R G +V R
Sbjct: 23 PEEGIFRIARDMFTEPELFDLEMELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D NG++HA N C+H A+++ G G +S F CP+H W Y DG L+K + F+
Sbjct: 83 DGNGQLHALVNACQHRGATLVRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGG--SSEILSINGID 198
GL + ++ FV +++ G++ + D+ V + + S E+ + G
Sbjct: 143 KATRGLKKARIQSYRGFVFVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTS 202
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ YT E NWK+ +N LD GYHV H +Y ++ + ++
Sbjct: 203 T---------YTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQVE-A 242
Query: 259 ESGSTEGTDDTHRLGS 274
E G T D +LG+
Sbjct: 243 ERGGAAATLDYSKLGA 258
>gi|296389067|ref|ZP_06878542.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
PAb1]
gi|313107408|ref|ZP_07793599.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
39016]
gi|355642442|ref|ZP_09052752.1| anthranilate 1,2-dioxygenase, large subunit [Pseudomonas sp.
2_1_26]
gi|386066446|ref|YP_005981750.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|416874440|ref|ZP_11918139.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
152504]
gi|310880101|gb|EFQ38695.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
39016]
gi|334843253|gb|EGM21845.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
152504]
gi|348035005|dbj|BAK90365.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|354830282|gb|EHF14331.1| anthranilate 1,2-dioxygenase, large subunit [Pseudomonas sp.
2_1_26]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + +L P DF + R G +V R
Sbjct: 23 PEEGIFRIARDMFTEPELFDLEMELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D NG++HA N C+H A+++ G G +S F CP+H W Y DG L+K + F+
Sbjct: 83 DGNGQLHALVNACQHRGATLVRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGG--SSEILSINGID 198
GL + ++ FV +++ G++ + D+ V + + S E+ + G
Sbjct: 143 KATRGLKKARIQSYRGFVFVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTS 202
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ YT E NWK+ +N LD GYHV H +Y ++ + ++
Sbjct: 203 T---------YTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQVE-A 242
Query: 259 ESGSTEGTDDTHRLGS 274
E G T D +LG+
Sbjct: 243 ERGGAAATLDYSKLGA 258
>gi|209519182|ref|ZP_03267986.1| anthranilate 1,2-dioxygenase, large subunit [Burkholderia sp. H160]
gi|209500408|gb|EEA00460.1| anthranilate 1,2-dioxygenase, large subunit [Burkholderia sp. H160]
Length = 463
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 26/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P +LE+ +F ++W + ++ + DF + R G ++ R
Sbjct: 22 PAEGVYRIAREMFTEPELFSLEMEHIFEKAWIYACHESEIANKNDFLTMRAGRQPLIISR 81
Query: 86 DDNGKIHAFHNVCRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITG--IKDF 142
D G ++A N C+H + L + G +S F CP+H W Y DG L+K + G DF
Sbjct: 82 DSAGNLNAMINACQHRGATLTRMTKGNQSTFTCPFHAWCYKNDGRLVK-VKAPGEYCDDF 140
Query: 143 NVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLS 202
+ GL +A++ FV +++ +VD E+LG + + S
Sbjct: 141 DKSVRGLKKARIASYKGFVFVSL--------DVDGTDTLEEYLGDARIFFDMMVAQSPTG 192
Query: 203 YL----CRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
L + YT + NWK+ +N LD GYHV H +Y ++ ++
Sbjct: 193 ELEVLPGKSTYTFDGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRIESNAK 242
Query: 259 ESGSTEGTDDTHRLGS 274
+ + GT D +LG+
Sbjct: 243 KGDAPSGTLDYSKLGA 258
>gi|421167476|ref|ZP_15625662.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa ATCC
700888]
gi|404534317|gb|EKA44059.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa ATCC
700888]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + +L P DF + R G +V R
Sbjct: 23 PEEGIFRIARDMFTEPELFDLEMELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D NG++HA N C+H A+++ G G +S F CP+H W Y DG L+K + F+
Sbjct: 83 DGNGQLHALVNACQHRGATLVRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGG--SSEILSINGID 198
GL + ++ FV +++ G++ + D+ V + + S E+ + G
Sbjct: 143 KATRGLKKARIQSYRGFVFVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTS 202
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ YT E NWK+ +N LD GYHV H +Y ++ + ++
Sbjct: 203 T---------YTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQVE-A 242
Query: 259 ESGSTEGTDDTHRLGS 274
E G T D +LG+
Sbjct: 243 ERGGVAATLDYSKLGA 258
>gi|307725898|ref|YP_003909111.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307586423|gb|ADN59820.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 427
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
S Y DP EL R+FY++W V + +L P DF + IG +V RD G ++
Sbjct: 26 SLYYDPQLFEEELERIFYKTWIWVAHESELPKPGDFVTTTIGRQPVIVVRDKAGTVNVLQ 85
Query: 96 NVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH A++ G F CPYH W+Y LDGTL G + V E G +PL+
Sbjct: 86 NRCRHRGATVCEEHKGNAKGFTCPYHSWSYALDGTLRALPYGDGYE--GVCEKGDLPLKK 143
Query: 155 ATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSS---EILSINGIDSSLSYLCRREYTI 211
G + L A E ++S ++LGG+ ++ G + ++
Sbjct: 144 LRVGVYQGLIF---ASFNESIES---LEDFLGGAKPWIDLFMKQGAGYPIKANGEHKFKF 197
Query: 212 ECNWKVFCDNYLDGGYHVPYAHK 234
+ NWK+ +N D YH P HK
Sbjct: 198 KGNWKIQLENTTD-LYHFPVVHK 219
>gi|444307888|ref|ZP_21143596.1| Rieske (2Fe-2S) domain-containing protein [Arthrobacter sp. SJCon]
gi|443479783|gb|ELT42770.1| Rieske (2Fe-2S) domain-containing protein [Arthrobacter sp. SJCon]
Length = 466
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 17 LVYEFNPQIPIEKALTP-----PSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDF 71
L Y + + P LTP P YT + L LE +++Y WQV T+++ P D+
Sbjct: 19 LKYPADAEYPESIVLTPQESHIPVEVYTSEAQLDLEFKQIWYSMWQVACRTEEVDKPGDY 78
Query: 72 FSGRIGEVEFVVCRDDNGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLL 131
IG+ F++ R ++G++ AF N CRH ++L G G C +H W + L G L
Sbjct: 79 LEYVIGDQSFLIVRGEDGQLRAFQNACRHRGTLLKHGIGNAKDIKCSFHAWCWSLKGELQ 138
Query: 132 KATRITGIKDFNVKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEI 191
+E+ L + TWG +V ++ E E+L ++
Sbjct: 139 DIPDRQLFPGVTDEEYALPEVGCDTWGGWVFIHPKPEGA--------PTLREFLARTATD 190
Query: 192 LSINGIDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
L +D + + R +ECNWKV + +L+ YHV H + L
Sbjct: 191 LEPYHMDRYRATMHAR-IPLECNWKVALEAFLE-AYHVSSTHPQITPYL 237
>gi|424862053|ref|ZP_18285999.1| dioxygenase [Rhodococcus opacus PD630]
gi|356660525|gb|EHI40889.1| dioxygenase [Rhodococcus opacus PD630]
Length = 390
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 148/368 (40%), Gaps = 29/368 (7%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTD E +F W L DP F +G ++ R +G++ AF N
Sbjct: 27 YYTDADIFTDEQENLFEAMWFCAVRAADLADPGAFRKVTVGRESVLLVRGRDGELRAFLN 86
Query: 97 VCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK-----DFNVKEFG 148
+CRH ++L T G +++ CPYH WTYGLDG L+ A + ++ D + +G
Sbjct: 87 ICRHRGAMLCTEDEGQIRRN-LQCPYHAWTYGLDGKLVAAPNMAALRDETGADIDRVRYG 145
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRRE 208
LVP+ + W + + + E E+ V E LG + I +L R
Sbjct: 146 LVPVALREWLGYAWVCLADEPPSFEDEVVGAV-TERLGDPAAIDRYQ--IGTLELGRRIV 202
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSI-------QRCESG 261
Y + NWK+ +N+++ YH H L L ++ L + + E
Sbjct: 203 YDVAANWKLIIENFME-CYHCATIHPELTE--VLPEFADGLAAQYFVGHGAAFGDDVEGF 259
Query: 262 STEGTDDTHRLGS------KAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYF 314
+ +GT L + YA I P +N + + + P++ R V D+
Sbjct: 260 TIDGTGGFESLSGIRPDQDRKYYAITIRPQVFVNLVPDHVIFHRMYPVSADRTIVECDWL 319
Query: 315 LDGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHS 374
+ + +S++ +V +D CE Q + S AY +G E + FH
Sbjct: 320 YSPEVTASGRDVSRSVELFHRVNQQDFDACERTQPTMASKAYRNGGVLVPAEHHIGEFHD 379
Query: 375 LLHCNLTN 382
L L+
Sbjct: 380 WLLERLSG 387
>gi|392983933|ref|YP_006482520.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa DK2]
gi|392319438|gb|AFM64818.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa DK2]
Length = 439
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + +L P DF + R G +V R
Sbjct: 23 PEEGIFRIARDMFTEPELFDLEMELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D NG++HA N C+H A+++ G G +S F CP+H W Y DG L+K + F+
Sbjct: 83 DGNGQLHALVNACQHRGATLVRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGG--SSEILSINGID 198
GL + ++ FV +++ G++ + D+ V + + S E+ + G
Sbjct: 143 KATRGLKKARIQSYRGFVFVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTS 202
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ YT E NWK+ +N LD GYHV H +Y ++ + ++
Sbjct: 203 T---------YTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQVE-A 242
Query: 259 ESGSTEGTDDTHRLGS 274
E G T D +LG+
Sbjct: 243 ERGGVAATLDYSKLGA 258
>gi|15597708|ref|NP_251202.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
PAO1]
gi|107101958|ref|ZP_01365876.1| hypothetical protein PaerPA_01003005 [Pseudomonas aeruginosa PACS2]
gi|218891510|ref|YP_002440377.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
LESB58]
gi|254240943|ref|ZP_04934265.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
2192]
gi|386058590|ref|YP_005975112.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa M18]
gi|418585050|ref|ZP_13149105.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
MPAO1/P1]
gi|418594027|ref|ZP_13157846.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
MPAO1/P2]
gi|421517019|ref|ZP_15963693.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
PAO579]
gi|451986524|ref|ZP_21934705.1| Anthranilate dioxygenase large subunit [Pseudomonas aeruginosa 18A]
gi|9948566|gb|AAG05900.1|AE004678_6 anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
PAO1]
gi|14132755|gb|AAK52293.1| putative anthranilate dioxygenase large subunit AntA [Pseudomonas
putida]
gi|126194321|gb|EAZ58384.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
2192]
gi|218771736|emb|CAW27510.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
LESB58]
gi|347304896|gb|AEO75010.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa M18]
gi|375044779|gb|EHS37371.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
MPAO1/P1]
gi|375045497|gb|EHS38079.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
MPAO1/P2]
gi|404346501|gb|EJZ72850.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
PAO579]
gi|451755829|emb|CCQ87228.1| Anthranilate dioxygenase large subunit [Pseudomonas aeruginosa 18A]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + +L P DF + R G +V R
Sbjct: 23 PEEGIFRIARDMFTEPELFDLEMELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D NG++HA N C+H A+++ G G +S F CP+H W Y DG L+K + F+
Sbjct: 83 DGNGQLHALVNACQHRGATLVRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGG--SSEILSINGID 198
GL + ++ FV +++ G++ + D+ V + + S E+ + G
Sbjct: 143 KATRGLKKARIQSYRGFVFVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTS 202
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ YT E NWK+ +N LD GYHV H +Y ++ + ++
Sbjct: 203 T---------YTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQVE-A 242
Query: 259 ESGSTEGTDDTHRLGS 274
E G T D +LG+
Sbjct: 243 ERGGVAATLDYSKLGA 258
>gi|433648782|ref|YP_007293784.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
gi|433298559|gb|AGB24379.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
Length = 386
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 159/367 (43%), Gaps = 32/367 (8%)
Query: 28 EKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDD 87
EKA+T P Y A E+ R+F R W + +Q+ P ++S I VV RD
Sbjct: 18 EKAVTLPPEAYGSDELYAAEVDRIFKRGWLPLCRVEQVATPGSYYSIDILGTPLVVTRDR 77
Query: 88 NGKIHAFHNVCRHHASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEF 147
+ +I C H + +G+G+ + CPYH W++GLDG L A + F+ ++
Sbjct: 78 HSEIRVLSRNCTHRWMEVCSGAGEANVLQCPYHLWSFGLDGHLAGAPEMKKSPAFDRNDY 137
Query: 148 GLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR 207
L W FV++N +A E + S A + + + ++ + ++ + +C
Sbjct: 138 PLKKFRHEIWKGFVMVNFDGQA---ESLASQYAALDPIVDAYDLENYQTVEQTDWGVC-- 192
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKG---------LASGLQLDSYSTSLYEKVSIQRC 258
+ +WK+ DN+++ YH H+G ++ ++ Y T+++ S QR
Sbjct: 193 ----DWDWKIMVDNFME-CYHHMGPHRGSLEDRFPANMSFTGEVGDYFTTMW---SQQRP 244
Query: 259 ESGS-----TEGTDD-THRLGSKAIYAFIYPNFMINRYGPWMDTNLVIPLAPTRCKVVFD 312
E + + G D T +++ YP I +M +PL + ++ D
Sbjct: 245 EYPADPPFLSPGADTLTAEHKDRSLIFIAYPLLQIAMGPAYMYWLKTLPLGAGKIELQLD 304
Query: 313 YFLD-GSLKDDKAFIEQS--LKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTM 369
+ SL +S +K + ED+ +C VQR + S GR + +E+ +
Sbjct: 305 ICMSPASLAAPNVEERRSELVKLICDIHREDLDVCAAVQRAVRSGVTSKGRLS-HLERPL 363
Query: 370 YHFHSLL 376
+ F+ L
Sbjct: 364 WEFYRYL 370
>gi|324999445|ref|ZP_08120557.1| dioxygenase large subunit [Pseudonocardia sp. P1]
Length = 428
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
S YTDP+ A EL +++YRSW VG+ ++ +P D+ IG + ++ RD G +H
Sbjct: 28 GSLYTDPAIFADELRQIWYRSWVYVGHVSEIPEPNDYVRKSIGPQDVIMTRDGAGDVHLL 87
Query: 95 HNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGL--VP 151
N C H +++ +G S F CPYHGWTY G +L G N + GL VP
Sbjct: 88 MNRCAHRGNLVCEADAGNSSSFRCPYHGWTYRNTGEMLGYPFHQGYGGRNKLDLGLGRVP 147
Query: 152 L----------EVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSL 201
+A GP +L ++G EA H E+D V L SEI G L
Sbjct: 148 RVGVYQGFVFGSMADDGPTLLEHLG-EARH--EIDRLVR----LSPESEIELTAGF---L 197
Query: 202 SYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQ 241
+ R NWK+ +N D GYH + H + S Q
Sbjct: 198 KHKAR------ANWKLLAENETD-GYHPQFVHASIFSVAQ 230
>gi|421180357|ref|ZP_15637922.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa E2]
gi|404545619|gb|EKA54695.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa E2]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + +L P DF + R G +V R
Sbjct: 23 PEEGIFRIARDMFTEPELFDLEMELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D NG++HA N C+H A+++ G G +S F CP+H W Y DG L+K + F+
Sbjct: 83 DGNGQLHALVNACQHRGATLVRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGG--SSEILSINGID 198
GL + ++ FV +++ G++ + D+ V + + S E+ + G
Sbjct: 143 KATRGLKKARIQSYRGFVFVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTS 202
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ YT E NWK+ +N LD GYHV H +Y ++ + ++
Sbjct: 203 T---------YTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQVE-A 242
Query: 259 ESGSTEGTDDTHRLGS 274
E G T D +LG+
Sbjct: 243 ERGGVAATLDYSKLGA 258
>gi|419753474|ref|ZP_14279878.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
PADK2_CF510]
gi|384400596|gb|EIE46955.1| anthranilate dioxygenase large subunit [Pseudomonas aeruginosa
PADK2_CF510]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 26 PIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCR 85
P E +T+P LE+ +F ++W + +L P DF + R G +V R
Sbjct: 23 PEEGIFRIARDMFTEPELFDLEMELIFEKNWIYACHESELARPHDFVTLRAGRQPLIVTR 82
Query: 86 DDNGKIHAFHNVCRHH-ASILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FN 143
D NG++HA N C+H A+++ G G +S F CP+H W Y DG L+K + F+
Sbjct: 83 DGNGQLHALVNACQHRGATLVRVGKGNQSTFTCPFHAWCYKNDGRLVKVKAPGEYPEGFD 142
Query: 144 VKEFGLVPLEVATWGPFVLLNM---GKEAVHQEEVDSNVVANEWLGG--SSEILSINGID 198
GL + ++ FV +++ G++ + D+ V + + S E+ + G
Sbjct: 143 KATRGLKKARIQSYRGFVFVSLDVAGEDDLVDFLGDARVFLDMLVAQSPSGELEVLPGTS 202
Query: 199 SSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRC 258
+ YT E NWK+ +N LD GYHV H +Y ++ + ++
Sbjct: 203 T---------YTYEGNWKLQNENGLD-GYHVSTVHY---------NYVATVQHRQQVE-A 242
Query: 259 ESGSTEGTDDTHRLGS 274
E G T D +LG+
Sbjct: 243 ERGGVAATLDYSKLGA 258
>gi|62290352|ref|YP_222145.1| Rieske 2Fe-2S family protein [Brucella abortus bv. 1 str. 9-941]
gi|189024583|ref|YP_001935351.1| Rieske 2Fe-2S family protein [Brucella abortus S19]
gi|237815856|ref|ZP_04594853.1| Biphenyl dioxygenase subunit alpha [Brucella abortus str. 2308 A]
gi|260546892|ref|ZP_05822631.1| Rieske 2Fe-2S family protein [Brucella abortus NCTC 8038]
gi|260755181|ref|ZP_05867529.1| Rieske domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260758400|ref|ZP_05870748.1| Rieske domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762226|ref|ZP_05874569.1| Rieske domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884196|ref|ZP_05895810.1| Rieske domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|297248738|ref|ZP_06932456.1| Rieske 2Fe-2S family protein [Brucella abortus bv. 5 str. B3196]
gi|376272806|ref|YP_005151384.1| Rieske 2Fe-2S family protein [Brucella abortus A13334]
gi|423166467|ref|ZP_17153170.1| hypothetical protein M17_00157 [Brucella abortus bv. 1 str. NI435a]
gi|423171158|ref|ZP_17157833.1| hypothetical protein M19_01691 [Brucella abortus bv. 1 str. NI474]
gi|423172760|ref|ZP_17159431.1| hypothetical protein M1A_00158 [Brucella abortus bv. 1 str. NI486]
gi|423178547|ref|ZP_17165191.1| hypothetical protein M1E_02787 [Brucella abortus bv. 1 str. NI488]
gi|423180588|ref|ZP_17167229.1| hypothetical protein M1G_01688 [Brucella abortus bv. 1 str. NI010]
gi|423183720|ref|ZP_17170357.1| hypothetical protein M1I_01689 [Brucella abortus bv. 1 str. NI016]
gi|423185340|ref|ZP_17171954.1| hypothetical protein M1K_00158 [Brucella abortus bv. 1 str. NI021]
gi|423188475|ref|ZP_17175085.1| hypothetical protein M1M_00157 [Brucella abortus bv. 1 str. NI259]
gi|62196484|gb|AAX74784.1| Rieske 2Fe-2S family protein [Brucella abortus bv. 1 str. 9-941]
gi|189020155|gb|ACD72877.1| Rieske 2Fe-2S family protein [Brucella abortus S19]
gi|237789154|gb|EEP63365.1| Biphenyl dioxygenase subunit alpha [Brucella abortus str. 2308 A]
gi|260095942|gb|EEW79819.1| Rieske 2Fe-2S family protein [Brucella abortus NCTC 8038]
gi|260668718|gb|EEX55658.1| Rieske domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260672658|gb|EEX59479.1| Rieske domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675289|gb|EEX62110.1| Rieske domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260873724|gb|EEX80793.1| Rieske domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|297175907|gb|EFH35254.1| Rieske 2Fe-2S family protein [Brucella abortus bv. 5 str. B3196]
gi|363400412|gb|AEW17382.1| Rieske 2Fe-2S family protein [Brucella abortus A13334]
gi|374538492|gb|EHR10000.1| hypothetical protein M19_01691 [Brucella abortus bv. 1 str. NI474]
gi|374543951|gb|EHR15429.1| hypothetical protein M17_00157 [Brucella abortus bv. 1 str. NI435a]
gi|374544279|gb|EHR15756.1| hypothetical protein M1A_00158 [Brucella abortus bv. 1 str. NI486]
gi|374545328|gb|EHR16791.1| hypothetical protein M1E_02787 [Brucella abortus bv. 1 str. NI488]
gi|374548119|gb|EHR19571.1| hypothetical protein M1G_01688 [Brucella abortus bv. 1 str. NI010]
gi|374548548|gb|EHR19996.1| hypothetical protein M1I_01689 [Brucella abortus bv. 1 str. NI016]
gi|374559037|gb|EHR30426.1| hypothetical protein M1M_00157 [Brucella abortus bv. 1 str. NI259]
gi|374560050|gb|EHR31433.1| hypothetical protein M1K_00158 [Brucella abortus bv. 1 str. NI021]
Length = 415
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 36 SWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFH 95
+YTDP + L+L +FY+ W VG+ +L + + +IG ++ RD G I AFH
Sbjct: 23 KFYTDPDYYKLDLENIFYKDWLFVGHDCELPKTGSYMTVQIGAYPVIIVRDAQGGIRAFH 82
Query: 96 NVCRHHAS-ILATGSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLEV 154
N CRH S I + G + VCPYH WTY LDG LL A ++ DF ++GL +
Sbjct: 83 NSCRHRGSRICSAEKGTAAKLVCPYHQWTYELDGRLLFARQVG--PDFKPADYGLKAVHC 140
Query: 155 ATWGPFVLLNMGKEA 169
T ++ + + +EA
Sbjct: 141 ETVAGYIYICVAEEA 155
>gi|384371436|gb|AFH77960.1| ring-hydroxylating dioxygenase large subunit [bacterium enrichment
culture clone pahAc2]
Length = 453
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 24/259 (9%)
Query: 38 YTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHNV 97
Y+D + EL R+F R W + + Q+ +P DFF +GE E VV R D+ I F N
Sbjct: 20 YSDQAIYEQELERIFGRCWLFLAHESQVPNPGDFFRTYMGEDEVVVVRQDDRSIRVFLNT 79
Query: 98 CRHHASILATGS-GKKSWFVCPYHGWTYGLDGTLLKATRITGI--KDFNVKEFGLVPLE- 153
C H + L G F C YHGW +GLDG+L+ + + + + +F LVP+E
Sbjct: 80 CTHRGNRLTRADRGNARAFSCNYHGWAFGLDGSLVTVPLESEVYFNEIDKNQFRLVPVER 139
Query: 154 VATWGPFVLLNMGKEAVHQEEVDSNV-----VANEWLGGSSEILSINGIDSSLSYLCRRE 208
V ++ + K A E ++ VA + + G +E+L ++
Sbjct: 140 VDSYHGLIFGCFDKNAPSLGEYLGDMRWYLDVALDAMPGGTELLG-----------ATQK 188
Query: 209 YTIECNWKVFCDNYLDGGYHVPYAHKGLASGLQLDSYSTSLYEKVSIQRCESGSTEGTDD 268
I NWK+ +N GYH+ ++H G Q +S S+ S G +
Sbjct: 189 VIIHTNWKLSVENVCGDGYHLGWSHGGALKATQSGDFSGFTVGNSSVDLEGGMSVAGLNG 248
Query: 269 THRLGS---KAIYAFIYPN 284
L + + YAF YPN
Sbjct: 249 NSVLATLDGVSGYAF-YPN 266
>gi|326795016|ref|YP_004312836.1| Rieske (2Fe-2S) iron-sulfur domain [Marinomonas mediterranea MMB-1]
gi|326545780|gb|ADZ91000.1| Rieske (2Fe-2S) iron-sulfur domain [Marinomonas mediterranea MMB-1]
Length = 422
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
++ Y DP +++ VF + W VG T ++ D+F+ IG+ ++ RD +G ++AF
Sbjct: 36 AALYNDPHMFRVDMEEVFQKEWLFVGMTSEIPKRGDYFTVEIGQNPVLIVRDADGSVNAF 95
Query: 95 HNVCRHHASILATG-SGKKSWFVCPYHGWTYGLDGTLLKATRITGIKDFNVKEFGLVPLE 153
HN CRH S + T GK + VCPYH WTY L G LL A G +F++K+ GL
Sbjct: 96 HNTCRHRGSRICTEHRGKVANLVCPYHQWTYDLKGNLLFAGTEMG-GEFDLKQHGLKKAF 154
Query: 154 VATWGPFVLLNMG-KEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRREYTIE 212
T G F+ +++ KE V +E+L E + ++++ + Y +
Sbjct: 155 CKTAGGFIFISLADKEPVGD--------FDEFLQTLEEYMEPYDVENTKLAVESNMYE-K 205
Query: 213 CNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N + YH +H L + L
Sbjct: 206 ANWKLVLENNRE-CYHCSGSHPELLNTL 232
>gi|440286741|ref|YP_007339506.1| ring-hydroxylating dioxygenase, large terminal subunit
[Enterobacteriaceae bacterium strain FGI 57]
gi|440046263|gb|AGB77321.1| ring-hydroxylating dioxygenase, large terminal subunit
[Enterobacteriaceae bacterium strain FGI 57]
Length = 433
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 35 SSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAF 94
+S Y + LEL R+F ++W V +T ++ + F + +G +V RD G +H
Sbjct: 33 TSLYNSETLFNLELDRIFSKTWVWVAHTSEIPETGSFKTTEVGTQPVIVVRDRKGNVHTL 92
Query: 95 HNVCRHHASILAT-GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIKD-FNVKEFGLVPL 152
N CRH A+ + +GK + FVCPYHGW Y LDG+L D E GLV L
Sbjct: 93 LNRCRHRAATVCEHRTGKTNSFVCPYHGWGYALDGSLRGVPHPESYADQLEKGELGLVSL 152
Query: 153 EVATWGPFVLLNMGKEAVHQEEVDSNV-VANEWLGGSSEILSINGIDSSLSYLCRREYTI 211
+ + + H E ++ + A +W+ ++ G + +
Sbjct: 153 RTEQYAGMIFATFNE---HIEPLEDFLGAAKKWM----DLFMKQGAGYPIKTGPAHRFRF 205
Query: 212 ECNWKVFCDNYLDGGYHVPYAHKGLASGL 240
NWK+ +N D GYH P H+ S +
Sbjct: 206 PGNWKIQLENTTD-GYHFPVVHRSFLSSV 233
>gi|397731176|ref|ZP_10497928.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396933176|gb|EJJ00334.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 390
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 149/367 (40%), Gaps = 27/367 (7%)
Query: 37 WYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVCRDDNGKIHAFHN 96
+YTD E +F W L DP F +G ++ R +G++ AF N
Sbjct: 27 YYTDADIFTDEQENLFEEMWFCAVRAADLADPGAFRKITVGRESVLLVRGRDGELRAFLN 86
Query: 97 VCRHHASILAT---GSGKKSWFVCPYHGWTYGLDGTLLKATRITGIK-----DFNVKEFG 148
+CRH ++L T G +++ CPYH WTYGLDG L+ A + ++ D + +G
Sbjct: 87 ICRHRGAMLCTEDEGQIRRN-LQCPYHAWTYGLDGKLVAAPNMATLRDETGADIDRVRYG 145
Query: 149 LVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSYLCRR- 207
LVP+ + W + + + E E+ V E LG + +I+ L RR
Sbjct: 146 LVPVALREWLGYAWVCLADEPPSFEDEVVGAV-TERLGDPA---AIDRYQIGTLELGRRI 201
Query: 208 EYTIECNWKVFCDNYLDGGYHVPYAHKGL-------ASGLQLD---SYSTSLYEKVSIQR 257
Y + NWK+ +N+++ YH H L A GL + + + V
Sbjct: 202 VYDVAANWKLIIENFME-CYHCATIHPELTEVLPEFADGLAAQYFVGHGAAFGDDVEGFT 260
Query: 258 CE-SGSTEGTDDTHRLGSKAIYAF-IYPNFMINRYGPWMDTNLVIPLAPTRCKVVFDYFL 315
+ SG E + YA I P +N + + + P++ R V D+
Sbjct: 261 IDGSGGFESLSGISEDQDRKYYAITIRPQVFVNLVPDHVIFHRMYPVSADRTIVECDWLY 320
Query: 316 DGSLKDDKAFIEQSLKDSEQVQMEDIILCEGVQRGLESPAYCSGRYAPSVEQTMYHFHSL 375
+ + +S++ +V +D CE Q + S AY +G E + FH
Sbjct: 321 SPEVTASGRDVSRSVELFHRVNQQDFDACERTQPTMASKAYRNGGVLVPAEHHIGEFHEW 380
Query: 376 LHCNLTN 382
L L+
Sbjct: 381 LLERLSG 387
>gi|443488678|ref|YP_007366825.1| oxidoreductase [Mycobacterium liflandii 128FXT]
gi|442581175|gb|AGC60318.1| oxidoreductase [Mycobacterium liflandii 128FXT]
Length = 456
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 25 IPIEKALTPPSSWYTDPSFLALELHRVFYRSWQVVGYTDQLKDPQDFFSGRIGEVEFVVC 84
+P P+ Y P+F LE+ R++ + WQ+ D + P D+F R G ++
Sbjct: 19 VPPASPTLVPAQRYHSPAFAQLEIERMWPKVWQLACMLDHVAAPGDYFEYRCGPYSVLIV 78
Query: 85 RDDNGKIHAFHNVCRHHASILATGSGKK-SWFVCPYHGWTYGLDGTLLKATRITGIKDFN 143
D +G + AF NVCRH + L GSG C YHGWT+ L G L + G +
Sbjct: 79 HDCDGVLRAFQNVCRHRGNSLCAGSGSGLRELKCGYHGWTWDLTGELRRVPNRKGFGSLH 138
Query: 144 VKEFGLVPLEVATWGPFVLLNMGKEAVHQEEVDSNVVANEWLGGSSEILSINGIDSSLSY 203
+ +F L+P+ V TW V +++ A + ++L E ++ G+ +
Sbjct: 139 MPDFPLLPVRVETWEGLVFVSLDVTA---------MPLMDYLDPIPEDIAWCGLS---DF 186
Query: 204 LCRREYTIE--CNWKVFCDNY 222
C T+E NWK D Y
Sbjct: 187 RCYATLTVEVDANWKTIADGY 207
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,470,782,435
Number of Sequences: 23463169
Number of extensions: 282172812
Number of successful extensions: 512346
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3925
Number of HSP's successfully gapped in prelim test: 1563
Number of HSP's that attempted gapping in prelim test: 500307
Number of HSP's gapped (non-prelim): 6871
length of query: 382
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 238
effective length of database: 8,980,499,031
effective search space: 2137358769378
effective search space used: 2137358769378
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)