Your job contains 1 sequence.
>039883
MTTTNGVLLSRLMSDGSDGFDLSPTDTEEVHVLAVDLIITDYCMPGMTGCELIKKIKLQS
FTFREIPTVIISSENILARIDR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039883
(82 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2194584 - symbol:ARR4 "response regulator 4" s... 190 5.4e-15 1
TAIR|locus:2025911 - symbol:ARR3 "response regulator 3" s... 186 1.4e-14 1
TAIR|locus:2027237 - symbol:ARR15 "response regulator 15"... 152 3.0e-14 2
TAIR|locus:2097870 - symbol:RR5 "response regulator 5" sp... 177 1.3e-13 1
TAIR|locus:2080590 - symbol:ARR9 "response regulator 9" s... 176 1.6e-13 1
TAIR|locus:2170723 - symbol:ARR6 "response regulator 6" s... 174 2.7e-13 1
TAIR|locus:2102509 - symbol:RR17 "response regulator 17" ... 170 7.1e-13 1
UNIPROTKB|Q4GZK2 - symbol:rr9 "Type A response regulator ... 169 9.1e-13 1
TAIR|locus:2040282 - symbol:RR3 "response regulator 3" sp... 169 9.1e-13 1
UNIPROTKB|Q4GZK7 - symbol:rr4 "Type A response regulator ... 165 2.4e-12 1
UNIPROTKB|Q4GZK5 - symbol:rr6 "Type A response regulator ... 141 2.8e-12 2
TAIR|locus:2011286 - symbol:ARR7 "response regulator 7" s... 153 4.5e-11 1
UNIPROTKB|Q4GZK8 - symbol:rr3 "Type A response regulator ... 136 2.9e-09 1
UNIPROTKB|Q4GZK4 - symbol:rr7 "Type A response regulator ... 132 7.6e-09 1
UNIPROTKB|Q4GZL0 - symbol:rr1 "Type A response regulator ... 133 8.9e-09 1
UNIPROTKB|Q4GZK9 - symbol:rr2 "Type A response regulator ... 128 4.7e-08 1
UNIPROTKB|Q4GZK3 - symbol:rr8 "Type A response regulator ... 112 1.0e-06 1
UNIPROTKB|P71403 - symbol:cheY "Chemotaxis protein CheY h... 92 0.00013 1
UNIPROTKB|Q74AX6 - symbol:cheY40H-1 "Response receiver Ch... 90 0.00021 1
TIGR_CMR|CJE_1261 - symbol:CJE_1261 "chemotaxis protein C... 90 0.00021 1
TIGR_CMR|GSU_2223 - symbol:GSU_2223 "chemotaxis protein C... 90 0.00021 1
UNIPROTKB|Q48GG3 - symbol:cheY2 "Chemotaxis protein CheY"... 85 0.00072 1
TIGR_CMR|CPS_1208 - symbol:CPS_1208 "phosphate regulon re... 89 0.00092 1
UNIPROTKB|Q4KG39 - symbol:cheY "Chemotaxis protein CheY" ... 84 0.00093 1
>TAIR|locus:2194584 [details] [associations]
symbol:ARR4 "response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010017
"red or far-red light signaling pathway" evidence=IMP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
[GO:0010114 "response to red light" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA;IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IGI] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0007623 GO:GO:0004674
GO:GO:0046777 GO:GO:0006351 GO:GO:0042752 GO:GO:0010114
GO:GO:0009793 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC007067 GO:GO:0010017
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2912722
EMBL:AB008487 EMBL:AB010915 EMBL:AF057282 IPI:IPI00523637
PIR:T48851 RefSeq:NP_172517.1 UniGene:At.22981 UniGene:At.67259
ProteinModelPortal:O82798 SMR:O82798 IntAct:O82798 STRING:O82798
EnsemblPlants:AT1G10470.1 GeneID:837587 KEGG:ath:AT1G10470
GeneFarm:4121 TAIR:At1g10470 InParanoid:O82798 OMA:KRIRDYM
PhylomeDB:O82798 Genevestigator:O82798 GermOnline:AT1G10470
Uniprot:O82798
Length = 259
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 38/50 (76%), Positives = 43/50 (86%)
Query: 33 LAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARIDR 82
L VDLIITDYCMPGMTG EL+KKIK +S FRE+P VI+SSEN+L RIDR
Sbjct: 87 LKVDLIITDYCMPGMTGYELLKKIK-ESSNFREVPVVIMSSENVLTRIDR 135
>TAIR|locus:2025911 [details] [associations]
symbol:ARR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IDA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=TAS] [GO:0010114
"response to red light" evidence=IMP] [GO:0010161 "red light
signaling pathway" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0007623 GO:GO:0006351 GO:GO:0042752 EMBL:AC007258
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008486 IPI:IPI00532280
PIR:T50853 RefSeq:NP_176202.1 UniGene:At.237
ProteinModelPortal:Q9ZWS9 SMR:Q9ZWS9 IntAct:Q9ZWS9 STRING:Q9ZWS9
EnsemblPlants:AT1G59940.1 GeneID:842288 KEGG:ath:AT1G59940
GeneFarm:4120 TAIR:At1g59940 eggNOG:COG3706 InParanoid:Q9ZWS9
OMA:RSEMIGI PhylomeDB:Q9ZWS9 ProtClustDB:CLSN2912722
Genevestigator:Q9ZWS9 GermOnline:AT1G59940 GO:GO:0010161
Uniprot:Q9ZWS9
Length = 231
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 33 LAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARIDR 82
L VDLIITDYCMPGMTG EL+KKIK +S +F+E+P VI+SSEN++ RIDR
Sbjct: 86 LKVDLIITDYCMPGMTGYELLKKIK-ESTSFKEVPVVIMSSENVMTRIDR 134
>TAIR|locus:2027237 [details] [associations]
symbol:ARR15 "response regulator 15" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IGI;RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC008263 EMBL:AC013258
EMBL:AF305720 IPI:IPI00538856 RefSeq:NP_177627.1 UniGene:At.11589
ProteinModelPortal:Q7G8V2 SMR:Q7G8V2 IntAct:Q7G8V2 STRING:Q7G8V2
EnsemblPlants:AT1G74890.1 GeneID:843828 KEGG:ath:AT1G74890
GeneFarm:4128 TAIR:At1g74890 HOGENOM:HOG000034820 InParanoid:Q7G8V2
KO:K14492 OMA:KISACKV PhylomeDB:Q7G8V2 ProtClustDB:CLSN2914197
Genevestigator:Q7G8V2 GermOnline:AT1G74890 Uniprot:Q7G8V2
Length = 206
Score = 152 (58.6 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 33 LAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARIDR 82
L V+LI+TDY MPG+TG EL+KKIK +S REIP VI+SSENI RI++
Sbjct: 71 LKVNLIVTDYSMPGLTGYELLKKIK-ESSALREIPVVIMSSENIQPRIEQ 119
Score = 44 (20.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 22 LSPTDTEEVHVLAVD 36
LS + + E+HVLAVD
Sbjct: 10 LSSSSSPELHVLAVD 24
>TAIR|locus:2097870 [details] [associations]
symbol:RR5 "response regulator 5" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IMP] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0010114 "response to red light"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0009536
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0010114 GO:GO:0009736 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AL049658
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008488 EMBL:AB010916
EMBL:AF057281 EMBL:AY072390 EMBL:AY114698 IPI:IPI00516847
PIR:T06673 PIR:T50855 PIR:T50856 RefSeq:NP_190393.1
UniGene:At.24915 ProteinModelPortal:Q9SB04 SMR:Q9SB04 IntAct:Q9SB04
STRING:Q9SB04 EnsemblPlants:AT3G48100.1 GeneID:823965
KEGG:ath:AT3G48100 GeneFarm:4122 TAIR:At3g48100 InParanoid:Q9SB04
OMA:LEANDIY PhylomeDB:Q9SB04 ProtClustDB:CLSN2684027
Genevestigator:Q9SB04 GermOnline:AT3G48100 Uniprot:Q9SB04
Length = 184
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 41/67 (61%), Positives = 49/67 (73%)
Query: 16 GSDGFDLSPTDTEEVHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSEN 75
G DG + S E+ L ++LI+TDY MPGMTG EL+KKIK +S FREIP VI+SSEN
Sbjct: 65 GLDGENNSSVGFED---LKINLIMTDYSMPGMTGYELLKKIK-ESSAFREIPVVIMSSEN 120
Query: 76 ILARIDR 82
IL RIDR
Sbjct: 121 ILPRIDR 127
>TAIR|locus:2080590 [details] [associations]
symbol:ARR9 "response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;IMP;TAS] [GO:0007623 "circadian rhythm"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 GO:GO:0009536 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623 GO:GO:0006351
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
ProtClustDB:CLSN2683767 EMBL:AB010918 EMBL:AL138655 EMBL:AY090234
EMBL:AY133571 IPI:IPI00543561 PIR:T47764 RefSeq:NP_191263.1
UniGene:At.245 ProteinModelPortal:O80366 SMR:O80366 IntAct:O80366
STRING:O80366 EnsemblPlants:AT3G57040.1 GeneID:824871
KEGG:ath:AT3G57040 GeneFarm:4126 TAIR:At3g57040 InParanoid:O80366
OMA:GISTDRA PhylomeDB:O80366 Genevestigator:O80366
GermOnline:AT3G57040 Uniprot:O80366
Length = 234
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 39/74 (52%), Positives = 53/74 (71%)
Query: 11 RLMSDGSD--GFDLSPTDTEEVHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPT 68
R +D +D F +P + + V+ V+LIITDYCMPGMTG +L+KK+K +S FR+IP
Sbjct: 51 RQSTDSNDPNAFSKAPVNHQ---VVEVNLIITDYCMPGMTGYDLLKKVK-ESSAFRDIPV 106
Query: 69 VIISSENILARIDR 82
VI+SSEN+ ARI R
Sbjct: 107 VIMSSENVPARISR 120
>TAIR|locus:2170723 [details] [associations]
symbol:ARR6 "response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009536 GO:GO:0006355 GO:GO:0006351 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2684027
EMBL:AB008489 EMBL:AB008491 EMBL:AB009053 EMBL:BT004799
IPI:IPI00547780 PIR:T50857 PIR:T50860 RefSeq:NP_201097.1
UniGene:At.24207 ProteinModelPortal:Q9ZWS6 SMR:Q9ZWS6 IntAct:Q9ZWS6
STRING:Q9ZWS6 EnsemblPlants:AT5G62920.1 GeneID:836412
KEGG:ath:AT5G62920 GeneFarm:4123 TAIR:At5g62920 InParanoid:Q9ZWS6
OMA:DDSQEIK PhylomeDB:Q9ZWS6 Genevestigator:Q9ZWS6
GermOnline:AT5G62920 Uniprot:Q9ZWS6
Length = 186
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 40/61 (65%), Positives = 46/61 (75%)
Query: 26 DTEEVHV----LAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARID 81
D EE V L V+LI+TDY MPGMTG EL+KKIK +S FRE+P VI+SSENIL RID
Sbjct: 67 DVEEKSVGFEDLKVNLIMTDYSMPGMTGYELLKKIK-ESSAFREVPVVIMSSENILPRID 125
Query: 82 R 82
R
Sbjct: 126 R 126
>TAIR|locus:2102509 [details] [associations]
symbol:RR17 "response regulator 17" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=TAS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005739 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K14492
EMBL:AF305722 EMBL:AL163972 IPI:IPI00540746 PIR:T49039
RefSeq:NP_567037.1 UniGene:At.5240 ProteinModelPortal:Q9FPR6
SMR:Q9FPR6 STRING:Q9FPR6 EnsemblPlants:AT3G56380.1 GeneID:824805
KEGG:ath:AT3G56380 GeneFarm:4130 TAIR:At3g56380 InParanoid:Q9FPR6
OMA:MEEELHV PhylomeDB:Q9FPR6 ProtClustDB:CLSN2917444
Genevestigator:Q9FPR6 GermOnline:AT3G56380 Uniprot:Q9FPR6
Length = 153
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 34/60 (56%), Positives = 47/60 (78%)
Query: 24 PTDTEEV-HVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARIDR 82
P T+ + +V+ V+LIITDYCMPGMTG EL+KK+K +S +E+P VI+SSENI RI++
Sbjct: 64 PQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVK-ESSNLKEVPVVILSSENIPTRINK 122
>UNIPROTKB|Q4GZK2 [details] [associations]
symbol:rr9 "Type A response regulator 9" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009735
GO:GO:0006355 GO:GO:0035556 GO:GO:0007623 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
EMBL:CM000136 EMBL:AJ938078 STRING:Q4GZK2 Uniprot:Q4GZK2
Length = 201
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 23 SPTDTE-EVHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARID 81
SP T+ + +AV+LIITDYCMPGMTG +L+KKIK S+ R+IP VI+SS+NI +RI+
Sbjct: 56 SPISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSY-LRDIPVVIMSSDNIPSRIN 114
Query: 82 R 82
R
Sbjct: 115 R 115
>TAIR|locus:2040282 [details] [associations]
symbol:RR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0007623 "circadian
rhythm" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=RCA] [GO:0048831 "regulation of shoot system
development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009536
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
EMBL:AB010917 EMBL:AC005662 EMBL:AY074643 IPI:IPI00535987
PIR:T48853 RefSeq:NP_181663.1 UniGene:At.244
ProteinModelPortal:O80365 SMR:O80365 IntAct:O80365 STRING:O80365
EnsemblPlants:AT2G41310.1 GeneID:818730 KEGG:ath:AT2G41310
GeneFarm:4125 TAIR:At2g41310 InParanoid:O80365 OMA:METESKF
PhylomeDB:O80365 ProtClustDB:CLSN2683767 Genevestigator:O80365
GermOnline:AT2G41310 Uniprot:O80365
Length = 225
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 37/72 (51%), Positives = 49/72 (68%)
Query: 11 RLMSDGSDGFDLSPTDTEEVHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVI 70
R+ + + SP +EV + +LIITDYCMPGMTG +L+KK+K +S FR IP VI
Sbjct: 51 RVDDNDPNALSTSPQIHQEVEI---NLIITDYCMPGMTGYDLLKKVK-ESAAFRSIPVVI 106
Query: 71 ISSENILARIDR 82
+SSEN+ ARI R
Sbjct: 107 MSSENVPARISR 118
>UNIPROTKB|Q4GZK7 [details] [associations]
symbol:rr4 "Type A response regulator 4" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000126
EMBL:AJ938073 Uniprot:Q4GZK7
Length = 232
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 13 MSDGSDGFDLSPTDTEEVHV-LAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVII 71
+ D D SP+ + H + V+LIITDYCMPGMTG +L+K++K S + ++IP VI+
Sbjct: 51 LRDEGDDSSSSPSSSSPDHQEIDVNLIITDYCMPGMTGYDLLKRVKGSS-SLKDIPVVIM 109
Query: 72 SSENILARIDR 82
SSEN+ ARI+R
Sbjct: 110 SSENVPARINR 120
>UNIPROTKB|Q4GZK5 [details] [associations]
symbol:rr6 "Type A response regulator 6" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AJ938075 ProteinModelPortal:Q4GZK5 KEGG:dosa:Os04t0673300-01
Gramene:Q4GZK5 Uniprot:Q4GZK5
Length = 170
Score = 141 (54.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 35 VDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARIDR 82
V++IITDY MPGMTG EL+K++K +S +EIP VI+SSEN+ RI R
Sbjct: 97 VNMIITDYWMPGMTGYELLKRVK-ESSQLKEIPVVIMSSENVPNRISR 143
Score = 36 (17.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 29 EVHVLAVD 36
E+HVLAVD
Sbjct: 49 EMHVLAVD 56
>TAIR|locus:2011286 [details] [associations]
symbol:ARR7 "response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=RCA] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0010200 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492
ProtClustDB:CLSN2914197 eggNOG:COG3706 EMBL:AB008490 EMBL:AC068602
IPI:IPI00536268 PIR:T50854 RefSeq:NP_173339.1 UniGene:At.238
ProteinModelPortal:Q9ZWS7 SMR:Q9ZWS7 IntAct:Q9ZWS7 STRING:Q9ZWS7
EnsemblPlants:AT1G19050.1 GeneID:838487 KEGG:ath:AT1G19050
GeneFarm:4124 TAIR:At1g19050 InParanoid:Q9ZWS7 OMA:LRISSCK
PhylomeDB:Q9ZWS7 Genevestigator:Q9ZWS7 GermOnline:AT1G19050
GO:GO:0019827 Uniprot:Q9ZWS7
Length = 206
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 33 LAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARI 80
L V+LI+TDY MPG++G +L+KKIK +S FRE+P VI+SSENIL RI
Sbjct: 77 LKVNLIVTDYSMPGLSGYDLLKKIK-ESSAFREVPVVIMSSENILPRI 123
>UNIPROTKB|Q4GZK8 [details] [associations]
symbol:rr3 "Type A response regulator 3" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000127 EMBL:AJ938072
STRING:Q4GZK8 Uniprot:Q4GZK8
Length = 131
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 8 LLSRLMSDGSDGFDLSPTDTEE--VHVLAVD----LIITDYCMPGMTGCELIKKIKLQSF 61
++SRL+ S + ++ D+ + + VL++D +IITDYCMP MTG +L+K++K +S
Sbjct: 25 VISRLLR--SSKYRVTTVDSGKRALEVLSLDRNVHMIITDYCMPEMTGFDLLKRVK-ESA 81
Query: 62 TFREIPTVIISSENILARIDR 82
+EIP V++SSEN RI R
Sbjct: 82 ELKEIPVVLMSSENSPTRIRR 102
>UNIPROTKB|Q4GZK4 [details] [associations]
symbol:rr7 "Type A response regulator 7" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938076
ProteinModelPortal:Q4GZK4 KEGG:dosa:Os07t0449700-01 Gramene:Q4GZK4
Uniprot:Q4GZK4
Length = 206
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 35 VDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARIDR 82
V +IITDY MP MTG +L+KKIK +S ++IP VI+SSEN+ RI R
Sbjct: 132 VSMIITDYWMPEMTGYDLLKKIK-ESSELKQIPVVIMSSENVPTRISR 178
>UNIPROTKB|Q4GZL0 [details] [associations]
symbol:rr1 "Type A response regulator 1" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CM000129 EMBL:AJ938070 eggNOG:NOG76823
Uniprot:Q4GZL0
Length = 231
Score = 133 (51.9 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 28 EEVHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARIDR 82
EE A+D+++TDYCMP MTG EL+K IK S + IP +++SSEN RI R
Sbjct: 55 EEGKEQAIDMVLTDYCMPEMTGYELLKAIKALS-PLKPIPVIVMSSENEPQRISR 108
>UNIPROTKB|Q4GZK9 [details] [associations]
symbol:rr2 "Type A response regulator 2" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938071
ProteinModelPortal:Q4GZK9 KEGG:dosa:Os02t0557800-01 Gramene:Q4GZK9
Uniprot:Q4GZK9
Length = 252
Score = 128 (50.1 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 8 LLSRLMSDGSDGFDLSPTDTEEVHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIP 67
LL R D SP + A+D+++TDYCMP MTG +L+K IK IP
Sbjct: 57 LLGRRRGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSP-NPIP 115
Query: 68 TVIISSENILARIDR 82
V++SSEN RI R
Sbjct: 116 VVVMSSENEPQRISR 130
>UNIPROTKB|Q4GZK3 [details] [associations]
symbol:rr8 "Type A response regulator 8" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:AJ938077 ProteinModelPortal:Q4GZK3
STRING:Q4GZK3 KEGG:dosa:Os08t0376700-01 KEGG:dosa:Os08t0377200-01
Gramene:Q4GZK3 Uniprot:Q4GZK3
Length = 121
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 35 VDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARI 80
VD+I++DYCMP MTG L+ ++K +S +P VI SS+NI RI
Sbjct: 49 VDMIVSDYCMPDMTGYNLLMEVK-KSPKLAHLPVVIASSDNIPERI 93
>UNIPROTKB|P71403 [details] [associations]
symbol:cheY "Chemotaxis protein CheY homolog" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AE000511
GenomeReviews:AE000511_GR GO:GO:0001539 KO:K03413 EMBL:X81897
EMBL:U97567 EMBL:AF021090 PIR:C64653 RefSeq:NP_207858.1
RefSeq:YP_006934983.1 PDB:3GWG PDB:3H1E PDB:3H1F PDB:3H1G
PDBsum:3GWG PDBsum:3H1E PDBsum:3H1F PDBsum:3H1G
ProteinModelPortal:P71403 DIP:DIP-3256N MINT:MINT-160671
GeneID:13870261 GeneID:899603 KEGG:heo:C694_05515 KEGG:hpy:HP1067
PATRIC:20593473 OMA:DVLITDW ProtClustDB:CLSK872349
EvolutionaryTrace:P71403 Uniprot:P71403
Length = 124
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 37 LIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSENILARI 80
++ITD+ MP M G +L+KK++ S F+EIP ++I++E A +
Sbjct: 49 VLITDWNMPEMNGLDLVKKVRSDS-RFKEIPIIMITTEGGKAEV 91
>UNIPROTKB|Q74AX6 [details] [associations]
symbol:cheY40H-1 "Response receiver CheY associated with
MCPs of class 40H" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6 GeneID:2685646
KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV ProtClustDB:CLSK828765
BioCyc:GSUL243231:GH27-2170-MONOMER Uniprot:Q74AX6
Length = 121
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 3 TTNGVLLSRLMSDGSDGFDLSPTDT--EEVHVLA---VDLIITDYCMPGMTGCELIKKIK 57
T +L++ + S DGF++ + E + +L +DLIITD MP + G EL+ ++
Sbjct: 12 TMRSMLVATIQS--LDGFEVVEASSGFEALRLLPRERLDLIITDINMPDINGLELVSFVR 69
Query: 58 LQSFTFREIPTVIISSE 74
S +R IP IIS+E
Sbjct: 70 T-SDNYRHIPLFIISTE 85
>TIGR_CMR|CJE_1261 [details] [associations]
symbol:CJE_1261 "chemotaxis protein CheY" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413
OMA:DVLITDW ProtClustDB:CLSK872349 RefSeq:YP_179249.1
ProteinModelPortal:Q5HTY6 STRING:Q5HTY6 GeneID:3231768
KEGG:cjr:CJE1261 PATRIC:20044318
BioCyc:CJEJ195099:GJC0-1287-MONOMER Uniprot:Q5HTY6
Length = 130
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 16 GSDGFDLSPTDTEEVHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSEN 75
G + +DL T E+V VL ITD+ MP M G EL+KK++ + + ++P +++++E
Sbjct: 34 GVEAWDLL-TKNEDVKVL-----ITDWNMPEMNGLELVKKVRAEK-KYEDMPIIMVTTEG 86
Query: 76 ILARI 80
A +
Sbjct: 87 GKAEV 91
>TIGR_CMR|GSU_2223 [details] [associations]
symbol:GSU_2223 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413
HSSP:P06143 RefSeq:NP_953272.2 ProteinModelPortal:Q74AX6
GeneID:2685646 KEGG:gsu:GSU2223 PATRIC:22027301 OMA:GANEYLV
ProtClustDB:CLSK828765 BioCyc:GSUL243231:GH27-2170-MONOMER
Uniprot:Q74AX6
Length = 121
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 3 TTNGVLLSRLMSDGSDGFDLSPTDT--EEVHVLA---VDLIITDYCMPGMTGCELIKKIK 57
T +L++ + S DGF++ + E + +L +DLIITD MP + G EL+ ++
Sbjct: 12 TMRSMLVATIQS--LDGFEVVEASSGFEALRLLPRERLDLIITDINMPDINGLELVSFVR 69
Query: 58 LQSFTFREIPTVIISSE 74
S +R IP IIS+E
Sbjct: 70 T-SDNYRHIPLFIISTE 85
>UNIPROTKB|Q48GG3 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_275520.1
ProteinModelPortal:Q48GG3 SMR:Q48GG3 STRING:Q48GG3 GeneID:3558182
KEGG:psp:PSPPH_3362 PATRIC:19976130 OMA:GHYDFLV
ProtClustDB:CLSK642753 Uniprot:Q48GG3
Length = 124
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 13/41 (31%), Positives = 29/41 (70%)
Query: 34 AVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSE 74
A D ++TD+ MPGMTG +L+++++ + +P +++++E
Sbjct: 45 AFDFLVTDWNMPGMTGIDLLRQVRADE-RLKSLPVLMVTAE 84
>TIGR_CMR|CPS_1208 [details] [associations]
symbol:CPS_1208 "phosphate regulon response regulator
PhoB" species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006796
"phosphate-containing compound metabolic process" evidence=ISS]
[GO:0006817 "phosphate ion transport" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0006817 eggNOG:COG0745 HOGENOM:HOG000034819
KO:K07657 OMA:QVLEMGP TIGRFAMs:TIGR02154 RefSeq:YP_267951.1
ProteinModelPortal:Q486R4 SMR:Q486R4 STRING:Q486R4 GeneID:3522949
KEGG:cps:CPS_1208 PATRIC:21465661
BioCyc:CPSY167879:GI48-1289-MONOMER Uniprot:Q486R4
Length = 233
Score = 89 (36.4 bits), Expect = 0.00092, P = 0.00092
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 18 DGFD-LSPTDTEE----VHVLAVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIIS 72
+GF+ + D E+ +H DLI+ D+ +PG TG L KK+K +T R IP ++++
Sbjct: 25 NGFNAIEACDIEQALAKIHEPYPDLILLDWMLPGGTGVSLAKKLKQNEYT-RNIPIIMLT 83
Query: 73 SEN 75
+ +
Sbjct: 84 ARS 86
>UNIPROTKB|Q4KG39 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:220664
"Pseudomonas protegens Pf-5" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0005622 GO:GO:0006935
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 OMA:FGFVISD RefSeq:YP_258794.1
ProteinModelPortal:Q4KG39 SMR:Q4KG39 STRING:Q4KG39 GeneID:3477601
KEGG:pfl:PFL_1668 PATRIC:19872565 ProtClustDB:CLSK715044
BioCyc:PFLU220664:GIX8-1676-MONOMER Uniprot:Q4KG39
Length = 123
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 12/41 (29%), Positives = 29/41 (70%)
Query: 34 AVDLIITDYCMPGMTGCELIKKIKLQSFTFREIPTVIISSE 74
++D ++TD+ MPGMTG +L++ ++ + +P +++++E
Sbjct: 45 SIDFLVTDWNMPGMTGIDLLRHVRADE-KLKHLPVLMVTAE 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 82 82 0.00091 102 3 11 22 0.40 29
29 0.43 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 482 (51 KB)
Total size of DFA: 86 KB (2066 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.23u 0.12s 8.35t Elapsed: 00:00:00
Total cpu time: 8.23u 0.12s 8.35t Elapsed: 00:00:00
Start: Thu May 9 16:14:42 2013 End: Thu May 9 16:14:42 2013