BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039884
(757 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4QXM3|PD5AA_XENLA Sister chromatid cohesion protein PDS5 homolog A-A OS=Xenopus
laevis GN=pds5a-a PE=1 SV=1
Length = 1323
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 202/758 (26%), Positives = 365/758 (48%), Gaps = 55/758 (7%)
Query: 33 PLRKSIIKHGLLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKEL 91
PL + L +KD+RL VA C++++FRI APE P+ + L+ +F I K L
Sbjct: 60 PLALHLSSEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGL 119
Query: 92 GNTGCPFFSKRVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLT 150
+T P F++ +LE +A K + I ++ DCN++ +Q+F FSV+ + H +
Sbjct: 120 EDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVI---NNSHNQKVQ 176
Query: 151 NHMLSTMTHIINEETSLPL--LEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVC 208
HML M+ I E + L+ +L NL+ K+ A LA +++ A+ +EP +
Sbjct: 177 MHMLDLMSSITMEGDGVTQEQLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIA 236
Query: 209 GFLTSCFLDRDAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVN 268
F + + DL E ++I ++F P +LL+V+P L +L + + R+ V
Sbjct: 237 NFFNQVLVLGKSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVR 296
Query: 269 LIGKICAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREIL 328
L+ K+ D+ LA + L+ FL RF+D VRL +++ A C + P ++++
Sbjct: 297 LLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHP--DLAKDLT 354
Query: 329 AALESRLLDFDDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKL 388
L+ R D ++ +R + ++ A+ L V ++L+ ER DK+ +RK+A++ L
Sbjct: 355 EFLKVRSHDPEEAIRHDVIVTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGL 414
Query: 389 LEVYREYCKKCCEGQMTVCDHFEQIPCKILMLCYDK--DYKEFRPQNIERILVEDLFP-V 445
++Y++YC EG + I K+L + Y D K +E+I + L P
Sbjct: 415 AQLYKKYCLH-GEGGKDAAEKVSWIKDKLLHIYYQNSIDDKLL----VEKIFAQQLVPHN 469
Query: 446 LEVEESTRHWVHLFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQ 505
LE EE + +L++ P +KALN + + RS +R L + K+ +
Sbjct: 470 LETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANTTA--- 526
Query: 506 MKNSFVKMSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLD-NMTIKNAEI-LRDKF 561
M + ++ + PDP KA+ ++ N++ +D K+ + LE L+ + + K A++ +RD
Sbjct: 527 MFAKLMTVAKNLPDPGKAQDFVKKFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIA 586
Query: 562 LKLIGNKHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSN--RYADKHLE----DS 611
K+ K P FL+ LL DSE + +V ++ + AD E DS
Sbjct: 587 RKVANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDS 646
Query: 612 SINLLLAIISIF----PSLLRGSEVQFQKLLERNGLINDKL----IEVLAKAGPHISIKY 663
+I L ++ + P+ E ++ LL+ + +DK+ I++ G I
Sbjct: 647 AIRAGLELLKVLSFTHPTSFHSDET-YESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDL 705
Query: 664 ----SDIYPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGRNIP 719
S + P+L + GT Q+K AV I S+ ++++ ++ + L SL+ ++P
Sbjct: 706 PQIRSALIPILHQKAKRGTPHQAKQAVHCIHSI-FSNKEVQLAQIFEPLSRSLNA--DVP 762
Query: 720 ----TVLQSLGCIAQYSVSAFESQSED-ITRYIYENLI 752
T L SLG I+ + F S + + +I ++L+
Sbjct: 763 EQLVTPLVSLGHISMLAPDQFASPMKSVVANFIVKDLL 800
>sp|Q4KLU7|PD5AB_XENLA Sister chromatid cohesion protein PDS5 homolog A-B OS=Xenopus
laevis GN=pds5a-b PE=1 SV=1
Length = 1323
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 200/748 (26%), Positives = 362/748 (48%), Gaps = 55/748 (7%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L +KD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 70 FLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNR 129
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ DCN++ +Q+F FSV+ + H + HML M+ I
Sbjct: 130 YFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVI---NNSHNQKVQMHMLDLMSSI 186
Query: 161 INEETSLPL--LEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
E + L+ +L NL+ K+ A LA +++ A+ +EP + F +
Sbjct: 187 TMEGDGVTQEQLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLG 246
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
+ DL E ++I ++F P +LL+V+P L +L + + R+ V L+ K+ D
Sbjct: 247 KSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKD 306
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ FL RF+D VRL +++ A C + P ++++ L+ R D
Sbjct: 307 SDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHP--DLAKDLTEFLKVRSHDP 364
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ A+ L V ++L+ ER DK+ +RK+A++ L ++Y++YC
Sbjct: 365 EEAIRHDVIVTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLH 424
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDK--DYKEFRPQNIERILVEDLFP-VLEVEESTRHW 455
EG + I K+L + Y D K +E+I + L P LE EE +
Sbjct: 425 -GEGGKDAAEKVSWIKDKLLHIYYQNSIDDKLL----VEKIFAQQLVPHNLETEERMKCL 479
Query: 456 VHLFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNSFVKMSA 515
+L++ P +KALN + + RS +R L + K+ + M + ++
Sbjct: 480 YYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANTTA---MFAKLMTVAK 536
Query: 516 SFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLD-NMTIKNAEI-LRDKFLKLIGNKHPE 571
+ PDP KA+ ++ N++ +D K+ + LE L+ + + K A++ +RD K+ K P
Sbjct: 537 NLPDPGKAQDFVKKFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPT 596
Query: 572 FEFLQ----LLTSKCLYIFDSELVCCIVNGLSSN--RYADKHLE----DSSINLLLAIIS 621
FL+ LL DSE + +V ++ + AD E DS+I L ++
Sbjct: 597 NPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELLK 656
Query: 622 IF----PSLLRGSEVQFQKLLERNGLINDKL----IEVLAKAGPHISIKY----SDIYPL 669
+ P+ E ++ LL+ + +DK+ I++ G I S + P+
Sbjct: 657 VLSFTHPTSFHSDET-YESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDLPQIRSALIPI 715
Query: 670 LERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGRNIP----TVLQSL 725
L + GT Q+K AV I S+ ++++ ++ + L SL+ ++P T L SL
Sbjct: 716 LHQKAKRGTPHQAKQAVHCIHSI-FSNKEVQLAQIFEPLSRSLNA--DVPEQLVTPLVSL 772
Query: 726 GCIAQYSVSAFESQSED-ITRYIYENLI 752
G I+ + F S + + +I ++L+
Sbjct: 773 GHISMLAPDQFASPMKSVVANFIVKDLL 800
>sp|Q5F3V3|PDS5A_CHICK Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus
GN=PDS5A PE=2 SV=2
Length = 1330
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 197/743 (26%), Positives = 356/743 (47%), Gaps = 54/743 (7%)
Query: 33 PLRKSIIKHGLLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKEL 91
PL + L +KD+RL VA C++++FRI APE P+ + L+ +F I K L
Sbjct: 62 PLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGL 121
Query: 92 GNTGCPFFSKRVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLT 150
+T P F++ +LE +A K + I ++ DCN++ +Q+F FSV+ + H +
Sbjct: 122 EDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVI---NNSHNQKVQ 178
Query: 151 NHMLSTMTHIINEETSLP--LLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVC 208
HML M+ II E + LL+ +L NL+ K+ A LA +++ + +EP +
Sbjct: 179 MHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQAFDLAKVLLKRTVQTIEPCIA 238
Query: 209 GFLTSCFLDRDAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVN 268
F + + DL E ++I ++F P +LL+V+P L +L + + R+ V
Sbjct: 239 NFFNQVLVLGKSSVSDLSEHVFDLILELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVR 298
Query: 269 LIGKICAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREIL 328
L+ K+ D+ LA + L+ FL RF+D VRL +++ A C + P ++++
Sbjct: 299 LLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHP--DLAKDLT 356
Query: 329 AALESRLLDFDDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKL 388
L+ R D ++ +R + ++ + L V ++L+ ER DK+ +RK+A++ L
Sbjct: 357 EYLKVRSHDPEEAIRHDVIVTIITAGKRDLSLVNDQLLGFVRERTLDKRWRVRKEAMMGL 416
Query: 389 LEVYREYCKKCCEGQMTVCDHFEQIPCKILMLCYDK--DYKEFRPQNIERILVEDLFP-V 445
++Y++YC G+ + I K+L + Y D K +E+I + L P
Sbjct: 417 AQLYKKYCLHAEAGK-DAAEKVSWIKDKLLHIYYQNSIDDKLL----VEKIFAQYLVPHN 471
Query: 446 LEVEESTRHWVHLFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQ 505
LE EE + +L++ P +KALN + + RS +R L + K+ +
Sbjct: 472 LETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANSAA--- 528
Query: 506 MKNSFVKMSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEI-LRDKF 561
M + ++ + PDP KA+ ++ N++ D K+ + LE L+ + K A++ +R+
Sbjct: 529 MFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIA 588
Query: 562 LKLIGNKHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSN--RYADKHLE----DS 611
KL K P FL+ LL DSE + +V ++ + AD E D+
Sbjct: 589 RKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDT 648
Query: 612 SINLLLAIISIF----PSLLRGSEVQFQKLLERNGLINDKL----IEVLAKAGPHISIKY 663
+I L ++ + P+ +E ++ LL+ + +DK+ I++ G I
Sbjct: 649 AIRAGLELLKVLSFTHPTSFHSAET-YESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDL 707
Query: 664 ----SDIYPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGRNIP 719
S + P+L + GT Q+K AV I ++ ++++ ++ + L SL+ ++P
Sbjct: 708 PQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIF-SNKEVQLAQIFEPLSRSLNA--DVP 764
Query: 720 ----TVLQSLGCIAQYSVSAFES 738
T L SLG I+ + F S
Sbjct: 765 EQLITPLVSLGHISMLAPDQFAS 787
>sp|Q6A026|PDS5A_MOUSE Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus
GN=Pds5a PE=3 SV=3
Length = 1332
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 204/761 (26%), Positives = 370/761 (48%), Gaps = 61/761 (8%)
Query: 33 PLRKSIIKHGLLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKEL 91
PL + L +KD+RL VA C++++FRI APE P+ + L+ +F I K L
Sbjct: 67 PLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGL 126
Query: 92 GNTGCPFFSKRVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLT 150
+T P F++ +LE +A K + I ++ DCN++ +Q+F FSV+ + H + +
Sbjct: 127 EDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVI---NNSHNTKVQ 183
Query: 151 NHMLSTMTHIINEETSLP--LLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVC 208
HML M+ II E + LL+ +L NL+ K+ + LA +++ + +E +
Sbjct: 184 MHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIA 243
Query: 209 GFLTSCF-LDRDAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAV 267
F L R +V DL E ++I ++F PQ+LL+V+P L +L + + R+ V
Sbjct: 244 NFFNQVLVLGRSSV-SDLSEHVFDLIQELFAIDPQLLLSVMPQLEFKLKSNDGEERLAVV 302
Query: 268 NLIGKICAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI 327
L+ K+ D+ LA + L+ FL RF+D VRL +++ A C + P ++++
Sbjct: 303 RLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHP--DLAKDL 360
Query: 328 LAALESRLLDFDDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLK 387
L+ R D ++ +R + ++ A+ L V ++L+ ER DK+ +RK+A++
Sbjct: 361 TEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMG 420
Query: 388 LLEVYREYCKKCCEGQMTVCDHFEQIPCKILMLCYDK--DYKEFRPQNIERILVEDLFP- 444
L ++Y++YC G+ + I K+L + Y D K +E+I + L P
Sbjct: 421 LAQLYKKYCLHGEAGK-EAAEKVSWIKDKLLHIYYQNSIDDKLL----VEKIFAQYLVPH 475
Query: 445 VLEVEESTRHWVHLFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKK--EKGSCHDET 502
LE EE + +L++ P +KALN + + RS +R L + K+ + +C
Sbjct: 476 NLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANC---- 531
Query: 503 HEQMKNSFVKMSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEI-LR 558
M + ++ + PDP KA+ ++ N++ D K+ + LE L+ + K A++ +R
Sbjct: 532 -SAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVR 590
Query: 559 DKFLKLIGNKHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSN--RYADKHLE--- 609
+ KL K P FL+ LL DSE + +V ++ + AD E
Sbjct: 591 EIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVS 650
Query: 610 -DSSINLLLAIISIF----PSLLRGSEVQFQKLLERNGLINDKL----IEVLAKAGPHIS 660
DS+I L ++ + P+ +E ++ LL+ + +DK+ I++ G I
Sbjct: 651 PDSAIRSGLELLKVLSFTHPTSFHSAET-YESLLQCLRMEDDKVAEAAIQIFRNTGHKIE 709
Query: 661 IKY----SDIYPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGR 716
S + P+L + GT Q+K AV I ++ ++++ ++ + L SL+
Sbjct: 710 TDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIF-SNKEVQLAQIFEPLSRSLNA-- 766
Query: 717 NIP----TVLQSLGCIAQYSVSAFESQSED-ITRYIYENLI 752
++P T L SLG I+ + F S + + +I ++L+
Sbjct: 767 DVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLL 807
>sp|A4L9P7|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A OS=Rattus
norvegicus GN=Pds5a PE=2 SV=1
Length = 1333
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 204/761 (26%), Positives = 368/761 (48%), Gaps = 61/761 (8%)
Query: 33 PLRKSIIKHGLLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKEL 91
PL + L +KD+RL VA C++++FRI APE P+ + L+ +F I K L
Sbjct: 67 PLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGL 126
Query: 92 GNTGCPFFSKRVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLT 150
+T P F++ +LE +A K + I ++ DCN++ +Q+F FSV+ + H +
Sbjct: 127 EDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVI---NNSHNKKVQ 183
Query: 151 NHMLSTMTHIINEETSLP--LLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVC 208
HML M+ II E + LL+ +L NL+ K+ + LA +++ + +E +
Sbjct: 184 MHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIA 243
Query: 209 GFLTSCF-LDRDAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAV 267
F L R +V DL E ++I ++F P +LL+V+P L +L + + R+ V
Sbjct: 244 NFFNQVLVLGRSSV-SDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVV 302
Query: 268 NLIGKICAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI 327
L+ K+ D+ LA + L+ FL RF+D VRL +++ A C + P ++++
Sbjct: 303 RLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHP--DLAKDL 360
Query: 328 LAALESRLLDFDDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLK 387
L+ R D ++ +R + ++ A+ L V ++L+ ER DK+ +RK+A++
Sbjct: 361 TEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMG 420
Query: 388 LLEVYREYCKKCCEGQMTVCDHFEQIPCKILMLCYDK--DYKEFRPQNIERILVEDLFP- 444
L ++Y++YC G+ + I K+L + Y D K +E+I + L P
Sbjct: 421 LAQLYKKYCLHGEAGK-EAAEKVSWIKDKLLHIYYQNSIDDKLL----VEKIFAQYLVPH 475
Query: 445 VLEVEESTRHWVHLFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKK--EKGSCHDET 502
LE EE + +L++ P +KALN + + RS +R L + K+ + +C
Sbjct: 476 NLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANC---- 531
Query: 503 HEQMKNSFVKMSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEI-LR 558
M + ++ + PDP KA+ ++ N++ D K+ + LE L+ + K A+I +R
Sbjct: 532 -SAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVR 590
Query: 559 DKFLKLIGNKHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSN--RYADKHLE--- 609
+ KL K P FL+ LL DSE + +V ++ + AD E
Sbjct: 591 EIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVS 650
Query: 610 -DSSINLLLAIISIF----PSLLRGSEVQFQKLLERNGLINDKL----IEVLAKAGPHIS 660
DS+I L ++ + P+ +E ++ LL+ + +DK+ I++ G I
Sbjct: 651 PDSAIRSGLELLKVLSFTHPTSFHSAET-YESLLQCLRMEDDKVAEAAIQIFRNTGHKIE 709
Query: 661 IKY----SDIYPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGR 716
S + P+L + GT Q+K AV I ++ ++++ ++ + L SL+
Sbjct: 710 TDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIF-SNKEVQLAQIFEPLSRSLNA-- 766
Query: 717 NIP----TVLQSLGCIAQYSVSAFESQSED-ITRYIYENLI 752
++P T L SLG I+ + F S + + +I ++L+
Sbjct: 767 DVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLL 807
>sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens
GN=PDS5A PE=1 SV=1
Length = 1337
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 203/761 (26%), Positives = 367/761 (48%), Gaps = 61/761 (8%)
Query: 33 PLRKSIIKHGLLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKEL 91
PL + L +KD+RL VA C++++FRI APE P+ + L+ +F I K L
Sbjct: 68 PLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGL 127
Query: 92 GNTGCPFFSKRVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLT 150
+T P F++ +LE +A K + I ++ DCN++ +Q+F FSV+ + H +
Sbjct: 128 EDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVI---NNSHNKKVQ 184
Query: 151 NHMLSTMTHIINEETSLP--LLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVC 208
HML M+ II E + LL+ +L NL+ K+ + LA +++ + +E +
Sbjct: 185 MHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIA 244
Query: 209 GFLTSCF-LDRDAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAV 267
F L R +V DL E ++I ++F P +LL+V+P L +L + + R+ V
Sbjct: 245 NFFNQVLVLGRSSV-SDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVV 303
Query: 268 NLIGKICAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI 327
L+ K+ D+ LA + L+ FL RF+D VRL +++ A C + P ++++
Sbjct: 304 RLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHP--DLAKDL 361
Query: 328 LAALESRLLDFDDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLK 387
L+ R D ++ +R + ++ A+ L V ++L+ ER DK+ +RK+A++
Sbjct: 362 TEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMG 421
Query: 388 LLEVYREYCKKCCEGQMTVCDHFEQIPCKILMLCYDK--DYKEFRPQNIERILVEDLFP- 444
L ++Y++YC G+ + I K+L + Y D K +E+I + L P
Sbjct: 422 LAQLYKKYCLHGEAGK-EAAEKVSWIKDKLLHIYYQNSIDDKLL----VEKIFAQYLVPH 476
Query: 445 VLEVEESTRHWVHLFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKK--EKGSCHDET 502
LE EE + +L++ P +KALN + + RS +R L + K+ + +C
Sbjct: 477 NLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANC---- 532
Query: 503 HEQMKNSFVKMSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEI-LR 558
M + ++ + PDP KA+ ++ N++ D K+ + LE L+ + K A+I +R
Sbjct: 533 -SAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVR 591
Query: 559 DKFLKLIGNKHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSN--RYADKHLE--- 609
+ KL K P FL+ LL DSE + +V ++ + AD E
Sbjct: 592 EIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVS 651
Query: 610 -DSSINLLLAIISIF----PSLLRGSEVQFQKLLERNGLINDKL----IEVLAKAGPHIS 660
D++I L ++ + P+ +E ++ LL+ + +DK+ I++ G I
Sbjct: 652 PDTAIRSGLELLKVLSFTHPTSFHSAET-YESLLQCLRMEDDKVAEAAIQIFRNTGHKIE 710
Query: 661 IKY----SDIYPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGR 716
S + P+L + GT Q+K AV I ++ +++ ++ + L SL+
Sbjct: 711 TDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIF-TNKEVQLAQIFEPLSRSLNA-- 767
Query: 717 NIP----TVLQSLGCIAQYSVSAFESQSED-ITRYIYENLI 752
++P T L SLG I+ + F S + + +I ++L+
Sbjct: 768 DVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLL 808
>sp|A1L1F4|PDS5A_DANRE Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio
GN=pds5a PE=2 SV=1
Length = 1320
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 194/748 (25%), Positives = 354/748 (47%), Gaps = 55/748 (7%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L +KD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 73 FLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNR 132
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ DCN++ +Q+F FSV+ + H + HML M+ I
Sbjct: 133 YFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVI---NNSHNQKVQMHMLDLMSSI 189
Query: 161 INEETSLP--LLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
I E + LL+ +L NL+ K+ A LA ++++ + +E + F +
Sbjct: 190 IMEGDGVTQELLDTILINLIPAHKNLNKQAYDLARTLLKRTVQTIETCIASFFNQVLVMG 249
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
+ DL E ++I ++F P +L++V+P L +L + + R+ V L+ K+ D
Sbjct: 250 KSSVSDLSEHVFDLIQELFAIDPLLLVSVMPQLEFKLKSNDGEERLAVVKLLAKLFGAKD 309
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ FL RF+D VRL ++ A C + P ++++ L+ R D
Sbjct: 310 SELATQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHP--DLAKDLTEFLKVRSHDP 367
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ + + L V ++L+ ER+ DK+ +RK+A++ L +++++YC
Sbjct: 368 EEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERMLDKRWRVRKEAMMGLAQLFKKYCLH 427
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDK--DYKEFRPQNIERILVEDLFP-VLEVEESTRHW 455
G+ + I K+L + Y D K +E+I + + P LE EE +
Sbjct: 428 HEAGKESAL-KISWIKDKLLHIYYQNSIDDKLL----VEKIFAQYMVPHSLETEEKMKCL 482
Query: 456 VHLFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNSFVKMSA 515
+L++ +KALN + + R +R L + K + M + ++
Sbjct: 483 YYLYACLDTNAVKALNEMWKCQNMLRGLVRELLDLHKLPTSEANTSA---MFGKLMTIAK 539
Query: 516 SFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAE-ILRDKFLKLIGNKHPE 571
+ PDP KA+ ++ N++ +D K+ LE+L+ + K AE +R+ KL K P
Sbjct: 540 NLPDPGKAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRKLTFPKQPT 599
Query: 572 FEFLQ----LLTSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINL---------LLA 618
FL+ LL DSE + +V L+ + ED + LL
Sbjct: 600 NPFLEMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEDEGVTPDTAIRAGLELLK 659
Query: 619 IIS-IFPSLLRGSEVQFQKLLERNGLINDKL----IEVLAKAGPHISIKY----SDIYPL 669
++S P+ +E ++ LL+ + +DK+ I++ G I + S + P+
Sbjct: 660 VLSFTHPTAFHSAET-YESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELPQIRSTLIPI 718
Query: 670 LERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGRNIP----TVLQSL 725
L + GT Q+K AV I ++ E ++ + L SL+ ++P T L SL
Sbjct: 719 LHQKAKRGTPHQAKQAVHCIHAIFHNKE-VQLAQIFEPLSRSLNA--DVPEQLITPLVSL 775
Query: 726 GCIAQYSVSAFESQSEDI-TRYIYENLI 752
G I+ + F S + I +I ++L+
Sbjct: 776 GHISMLAPDQFASPMKSIVANFIVKDLL 803
>sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus
laevis GN=pds5b-b PE=2 SV=2
Length = 1464
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 187/732 (25%), Positives = 347/732 (47%), Gaps = 56/732 (7%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L DKD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 68 FLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNR 127
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ DCN++ Q++ FSV+ + H + HM+ M+ I
Sbjct: 128 YFYLLENIAWVKSYNICFELEDCNEIFTQLYRTLFSVI---NNGHNQKVHMHMVDLMSSI 184
Query: 161 I--NEETSLPLLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
+ + S LL+ VL NLV K+ A LA ++++ A+ +EP++ F +
Sbjct: 185 VCEGDTVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG 244
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
DL E ++I +++ +LL+V+P L +L + + R++ V L+ K+ D
Sbjct: 245 KTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKD 304
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ +L RF+D +RL ++ A + P ++++ L+ R D
Sbjct: 305 SELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHSLMNHP--DLAKDLTEYLKVRSHDP 362
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ A+ L V ++L++ ER DK+ +RK+A++ L ++Y++Y +
Sbjct: 363 EEAIRHDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQ 422
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDKDYKEFRPQNIERILVEDLFP-VLEVEESTRHWVH 457
G+ + I K+L + Y + +ERI + + P LE E + +
Sbjct: 423 VEAGKES-AKQISWIKDKLLHIYYQNSIDDRL--LVERIFAQYMVPHNLETTERMKCLYY 479
Query: 458 LFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNSFVK---MS 514
L++ +KALN + + R ++ L + KK K T K F K ++
Sbjct: 480 LYATLDTNAVKALNEMWKCQNMLRHHVKDLLDLIKKPK------TEAGSKAIFSKVMVIT 533
Query: 515 ASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEI-LRDKFLKLIGNKHP 570
+ PDP K + ++ ++ D KI LE+L+ + K AE+ +RD KL K P
Sbjct: 534 KNLPDPGKGQDFLKKFTQVLEDDEKIRGQLEKLVSPTCSYKQAEVCVRDITKKLGNPKQP 593
Query: 571 EFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINL---------LL 617
FL+ LL D+E + ++ ++ + ED + LL
Sbjct: 594 TNPFLEMIKFLLERIAPVHIDTESISSLIKLVNKSIDGTADDEDEGVPTDQAIRAGLELL 653
Query: 618 AIISIFPSLLRGSEVQFQKLLERNGLINDKLIE----VLAKAG-------PHISIKYSDI 666
++S + S F+ LL + ++K+ E + G PHI S +
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGNKIEEDFPHIR---SAL 710
Query: 667 YPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGR--NIPTVLQS 724
P+L++ +G+ Q+K+++ I ++ +S++ F ++ + L SL G + T L +
Sbjct: 711 LPVLQQKAKKGSPRQAKYSIHCIHAI-FSSKETQFAQIFEPLHKSLDPGNPEQLITSLVT 769
Query: 725 LGCIAQYSVSAF 736
+G IAQ + F
Sbjct: 770 IGHIAQLAPDQF 781
>sp|Q9HFF5|PDS5_SCHPO Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pds5 PE=1 SV=1
Length = 1205
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 179/758 (23%), Positives = 355/758 (46%), Gaps = 52/758 (6%)
Query: 33 PLRKSIIKHGLLHQNDKDIRLSVATCVSELFRILAPEPPFEDNYLRGVFELIISLFKELG 92
P+ +S++ + LLH DK IR C+ EL R+ AP+ PF + L +F++I+ + L
Sbjct: 49 PVARSLVNNNLLHHKDKGIRSYTLCCIVELLRLCAPDAPFTLSQLEDIFQVILKILSGLM 108
Query: 93 NTGCPFFSKRVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTN 151
N ++ + +ILE ++ K V+++D+ + + ++ +F FF + R + ++
Sbjct: 109 NQESTYYPQIYEILESLSNVKSAVLIVDLPNAEEFLVNIFRLFFDLARKGTTKNVEF--- 165
Query: 152 HMLSTMTHIINEETSLP--LLEVVLWNL-----VKQEKDSPYA-----ASQLAVSVIRNC 199
+ML + +INE ++P L ++ L V+Q S + A QLA ++ +
Sbjct: 166 YMLDIINQLINEINTIPAAALNILFAQLISGKGVRQTIGSSDSTNHGPAFQLARNIFHDS 225
Query: 200 AEKLEPFVCGFLTSCFLD-RDAVEGDLKE----FYHEIIFKIFQCSPQMLLAVIPNLIQE 254
A++L+ +VC + + D RD++ + F H ++ ++++ +P LL +IP E
Sbjct: 226 ADRLQRYVCQYFSDIIFDSRDSLSDSMTTPEFIFSHNLVLQLWKYAPTTLLNIIPQFENE 285
Query: 255 LLVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKAC 314
L +Q VR+ A+ +G + DN + YP ++ F R +DKS R+ + A
Sbjct: 286 LQAEQTSVRLVAIETVGLMLQ--DNAIWSDYPRVWSAFCGRLNDKSVACRIKCIEVASNA 343
Query: 315 YLGGPFRKESRE-ILAALESRLLDFDDRVRTEAVIVACDLARSHLKF-VPEKLISEATER 372
E E ++ L+S+L D D++VR + L K + + +R
Sbjct: 344 LQNSLATSEIIENVVQMLQSKLADTDEKVRVATLKTIEQLTFETFKMQFSVQALKLMGDR 403
Query: 373 LRDKKISIRKKALLKLLEVYREYCKKCCEGQMTVCDHFEQIPCKILMLCYDKDYKEFRPQ 432
LRD+K+++R +A+ L ++Y + +G F IP +L + Y D E
Sbjct: 404 LRDRKLNVRLQAIRTLSQIYNRAYQDLIDGVEYSIQMFSWIPSSLLEVFYVND--ETTNA 461
Query: 433 NIERILVEDLFPVLEVEESTRHWVHLFSL--FTPLHLKALNCVLSQKKRFRSEMRYYLSV 490
+E + E + L + TR S+ F+ ++ +L ++ ++ + YY+
Sbjct: 462 AVEICMAELVLQYLSSDTQTRLNRLFLSIKYFSEKAMRVFILLLQRQVKYSELLNYYIEC 521
Query: 491 RKKEKGSCHDETHEQMKNSFVK----MSASFPDPSKAEGCFQRLNEMKDNKIFNSLEELL 546
K G D E + N K +S+ +P+ E F++ E+ D + S + LL
Sbjct: 522 CKNYNGGVMDNDEESITNKLKKVIDIISSKSSNPTLTEATFRKFAELNDRQ---SYKMLL 578
Query: 547 DNMTIKNAEILRDKFLKLIGNKHPEFE-------FLQLLTSKCLYIFDSELVCCIVNGLS 599
+IK+ + K +K + + E F + L+ F+ V I+ L+
Sbjct: 579 QTFSIKSEYQVVLKSIKYLFKRVSETLSTASLECFRIFVYRSALFAFNKSNVHEIIQLLN 638
Query: 600 SNRYADKHLEDSSINLLLAIISIFPSLLRGSEVQFQKLLERNGLIND-KLIEVL---AKA 655
L+ S LL + I P++ ++ + ++ +G+ +D K+I+ L +K
Sbjct: 639 EPVKYHNFLKPSEA-LLQHLPLIHPNIYGEVVIEVENIIVSSGIESDPKVIKALSQFSKR 697
Query: 656 GPHISIKYSDIYPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCG 715
+ SI+ + +L +LCL GT+ Q+K A + IA +++F +++ +V++L
Sbjct: 698 KKNFSIQ-TTTAEILRKLCLHGTQEQAKQAATIIA--ITETKEFK-LDMITNIVENLEYN 753
Query: 716 RNIPTVLQSLGCIAQYSVSAFESQSEDITRYIYENLIK 753
+P L +LG + Y++ E ++ +T ++ + +I+
Sbjct: 754 GGLPVRLMTLGQLFLYTLEEVEKVADQVTEFLVKKVIQ 791
>sp|Q498H0|PD5BA_XENLA Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus
laevis GN=pds5b-a PE=1 SV=1
Length = 1448
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 188/732 (25%), Positives = 345/732 (47%), Gaps = 56/732 (7%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L DKD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 68 FLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKSPQFNR 127
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ D N++ Q++ FSV+ + H + HM+ M+ I
Sbjct: 128 YFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVI---NNGHNQKVHMHMVDLMSSI 184
Query: 161 I--NEETSLPLLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
+ + S LL+ VL NLV K+ A LA ++++ A+ +EP++ F +
Sbjct: 185 VCEGDTVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG 244
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
DL E ++I +++ +LL+V+P L +L + + R++ V L+ K+ D
Sbjct: 245 KTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKD 304
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ +L RF+D VRL ++ A + P ++++ L+ R D
Sbjct: 305 SELASQNKTLWQCYLGRFNDIHVPVRLECVKFASHSLVNHP--DLAKDLTDYLKVRSHDP 362
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ A+ L V ++L++ ER DK+ +RK+A++ L ++Y++Y +
Sbjct: 363 EEAIRHDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQ 422
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDKDYKEFRPQNIERILVEDLFP-VLEVEESTRHWVH 457
G+ + I K+L + Y + +ERI + + P LE E + +
Sbjct: 423 AEAGKES-AKQISWIKDKLLHIYYQNSIDDRLL--VERIFAQYMVPHNLETTERMKCLYY 479
Query: 458 LFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNSFVK---MS 514
L++ +KALN + + R ++ L + KK K T K F K ++
Sbjct: 480 LYATLDTNAVKALNEMWKCQNMLRHHVKDLLDLIKKPK------TEAGSKAIFSKVMVIT 533
Query: 515 ASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEI-LRDKFLKLIGNKHP 570
+ PDP K + ++ ++ D KI LE+L+ + K AE+ +RD KL K P
Sbjct: 534 RNLPDPGKGQDFLKKFTQVLEDDEKIRGQLEKLVSPTCSCKQAEVCVRDITKKLGNPKQP 593
Query: 571 EFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINL---------LL 617
FL+ LL D+E + ++ ++ + ED + LL
Sbjct: 594 TNPFLEMIKFLLERIAPVHIDTESISALIKLVNKSIDGTADDEDEGVTTDQAIRAGLELL 653
Query: 618 AIISIFPSLLRGSEVQFQKLLERNGLINDKLIE----VLAKAG-------PHISIKYSDI 666
++S + S F+ LL + ++K+ E + G PHI S +
Sbjct: 654 KVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIR---SAL 710
Query: 667 YPLLERLCLEGTRAQSKHAVSAIASLSGASEQFVFMELCKGLVDSLHCGR--NIPTVLQS 724
P+L++ +G Q+K+++ I ++ +S++ F ++ + L SL G + T L S
Sbjct: 711 LPVLQQKAKKGPPRQAKYSIHCIQAI-FSSKETQFAQIFEPLHKSLDPGNPEQLITSLVS 769
Query: 725 LGCIAQYSVSAF 736
+G IAQ + F
Sbjct: 770 IGHIAQLAPDQF 781
>sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus
GN=PDS5B PE=2 SV=3
Length = 1412
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 185/730 (25%), Positives = 343/730 (46%), Gaps = 52/730 (7%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L DKD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 68 FLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNR 127
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ D N++ Q++ FSV+ + H + HM+ M+ I
Sbjct: 128 YFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVI---NNGHNQKVHMHMVDLMSSI 184
Query: 161 I--NEETSLPLLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
I + S LL+ VL NLV K+ A LA ++++ A+ +EP++ F +
Sbjct: 185 ICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG 244
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
DL E ++I +++ +LL+V+P L +L + + R++ V L+ K+ D
Sbjct: 245 KTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKD 304
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ +L RF+D +RL ++ A C + P ++++ L+ R D
Sbjct: 305 SELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHP--DLAKDLTEYLKVRSHDP 362
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ A+ L V + L++ ER DK+ +RK+A++ L ++Y++Y +
Sbjct: 363 EEAIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQ 422
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDKDYKEFRPQNIERILVEDLFP-VLEVEESTRHWVH 457
G+ I K+L + Y + +ERI + + P LE E + +
Sbjct: 423 SEAGK-EAAKQISWIKDKLLHIYYQNSIDDRLL--VERIFAQYMVPHNLETNERMKCLYY 479
Query: 458 LFSLFTPLHLKALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNSFVKMSASF 517
L++ +KALN + + R +++ + + K+ K D + + + + + ++ +
Sbjct: 480 LYATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKT---DASSKAIFSKVMVITRNL 536
Query: 518 PDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEILRDKFLKLIGN-KHPEFE 573
PDP KA+ ++ ++ D KI + LE L+ + K AE + K +GN K P
Sbjct: 537 PDPGKAQDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNP 596
Query: 574 FLQ----LLTSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINL---------LLAII 620
FL+ LL D+E + ++ ++ + ED + LL ++
Sbjct: 597 FLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVL 656
Query: 621 SIFPSLLRGSEVQFQKLLERNGLINDKLIE----VLAKAG-------PHISIKYSDIYPL 669
S + S F+ LL + ++K+ E + G PHI S + P+
Sbjct: 657 SFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIR---SALLPV 713
Query: 670 LERLCLEGTRAQSKHAVSAIASLSGASE-QF--VFMELCKGLVDSLHCGRNIPTVLQSLG 726
L +G Q+K+A+ I ++ + E QF +F L K L S ++ T L ++G
Sbjct: 714 LHHKAKKGPPRQAKYAIHCINAIFSSKETQFAQIFEPLHKSLDPS--NFEHLITPLVTIG 771
Query: 727 CIAQYSVSAF 736
IA + F
Sbjct: 772 HIAMLAPDQF 781
>sp|Q6TRW4|PDS5B_RAT Sister chromatid cohesion protein PDS5 homolog B OS=Rattus
norvegicus GN=Pds5b PE=2 SV=2
Length = 1447
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 194/741 (26%), Positives = 347/741 (46%), Gaps = 74/741 (9%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L DKD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 68 FLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNR 127
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ D N++ Q++ FSV+ + H + HM+ M+ I
Sbjct: 128 YFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVI---NNGHNQKVHMHMVDLMSSI 184
Query: 161 I--NEETSLPLLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
I + S LL+ VL NLV K+ A LA ++++ A+ +EP++ F +
Sbjct: 185 ICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG 244
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
DL E ++I +++ +LL+V+P L +L + + R++ V L+ K+ D
Sbjct: 245 KTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKD 304
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ +L RF+D +RL ++ A C + P ++++ L+ R D
Sbjct: 305 SELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHP--DLAKDLTEYLKVRSHDP 362
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ A+ + V + L++ ER DK+ +RK+A++ L ++Y++Y +
Sbjct: 363 EEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQ 422
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDKD---YKEFRPQNIERILVEDLFPVLEVE---EST 452
G+ D +QI C+ KD + ++ +R+LVE +F V E+T
Sbjct: 423 SAAGK----DAAKQI-------CWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETT 471
Query: 453 RHWVHLFSLFTPLHL---KALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNS 509
L+ L+ L L KALN + + R +++ L + K+ K T +K
Sbjct: 472 ERMKCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPK------TDASVKAI 525
Query: 510 FVK---MSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEILRDKFLK 563
F K ++ + PDP KA+ ++ ++ D KI LE L+ + K AE + K
Sbjct: 526 FSKVMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITK 585
Query: 564 LIGN-KHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINL--- 615
+GN K P FL+ LL D+E + ++ ++ + ED +
Sbjct: 586 KLGNPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQA 645
Query: 616 ------LLAIISIFPSLLRGSEVQFQKLLERNGLINDKLIE----VLAKAG-------PH 658
LL ++S + S F+ LL + ++K+ E + G PH
Sbjct: 646 IRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPH 705
Query: 659 ISIKYSDIYPLLERLCLEGTRAQSKHAVSAIASLSGASE-QF--VFMELCKGLVDSLHCG 715
I S + P+L +G Q+K+A+ I ++ + E QF +F L K L S
Sbjct: 706 IR---SALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPS--NL 760
Query: 716 RNIPTVLQSLGCIAQYSVSAF 736
++ T L ++G IA + F
Sbjct: 761 EHLITPLVTIGHIALLAPDQF 781
>sp|Q4VA53|PDS5B_MOUSE Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus
GN=Pds5b PE=1 SV=1
Length = 1446
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 191/738 (25%), Positives = 342/738 (46%), Gaps = 68/738 (9%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L DKD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 68 FLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNR 127
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ D N++ Q++ FSV+ + H + HM+ M+ I
Sbjct: 128 YFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVI---NNGHNQKVHMHMVDLMSSI 184
Query: 161 I--NEETSLPLLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
I + S LL+ VL NLV K+ A LA ++++ A+ +EP++ F +
Sbjct: 185 ICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG 244
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
DL E ++I +++ +LL+V+P L +L + + R++ V L+ K+ D
Sbjct: 245 KTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKD 304
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ +L RF+D +RL ++ A C + P ++++ L+ R D
Sbjct: 305 SELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHP--DLAKDLTEYLKVRSHDP 362
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ A+ + V + L++ ER DK+ +RK+A++ L ++Y++Y +
Sbjct: 363 EEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQ 422
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDKDYKEFRPQNIERILVEDLFPVLEVE---ESTRHW 455
G+ + K+L + Y +R+LVE +F V E+T
Sbjct: 423 SAAGK-DAAKQISWVKDKLLHIYYQNSID-------DRLLVERIFAQYMVPHNLETTERM 474
Query: 456 VHLFSLFTPLHL---KALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNSFVK 512
L+ L+ L L KALN + + R +++ L + K+ K T +K F K
Sbjct: 475 KCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPK------TDASVKAIFSK 528
Query: 513 ---MSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEILRDKFLKLIG 566
++ + PDP KA+ ++ ++ D KI LE L+ + K AE + K +G
Sbjct: 529 VMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLG 588
Query: 567 N-KHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINL------ 615
N K P FL+ LL D+E + ++ ++ + ED +
Sbjct: 589 NPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRA 648
Query: 616 ---LLAIISIFPSLLRGSEVQFQKLLERNGLINDKLIE----VLAKAG-------PHISI 661
LL ++S + S F+ LL + ++K+ E + G PHI
Sbjct: 649 GLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIR- 707
Query: 662 KYSDIYPLLERLCLEGTRAQSKHAVSAIASLSGASE-QF--VFMELCKGLVDSLHCGRNI 718
S + P+L +G Q+K+A+ I ++ + E QF +F L K L S ++
Sbjct: 708 --SALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPS--NLEHL 763
Query: 719 PTVLQSLGCIAQYSVSAF 736
T L ++G IA + F
Sbjct: 764 ITPLVTIGHIALLAPDQF 781
>sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens
GN=PDS5B PE=1 SV=1
Length = 1447
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 192/738 (26%), Positives = 342/738 (46%), Gaps = 68/738 (9%)
Query: 43 LLHQNDKDIRLSVATCVSELFRILAPEPPFED-NYLRGVFELIISLFKELGNTGCPFFSK 101
L DKD+RL VA C++++FRI APE P+ + L+ +F I K L +T P F++
Sbjct: 68 FLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNR 127
Query: 102 RVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHI 160
+LE +A K + I ++ D N++ Q++ FSV+ + H + HM+ M+ I
Sbjct: 128 YFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVI---NNGHNQKVHMHMVDLMSSI 184
Query: 161 I--NEETSLPLLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCGFLTSCFLDR 218
I + S LL+ VL NLV K+ A LA ++++ A+ +EP++ F +
Sbjct: 185 ICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLG 244
Query: 219 DAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPD 278
DL E ++I +++ +LL+V+P L +L + + R++ V L+ K+ D
Sbjct: 245 KTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKD 304
Query: 279 NCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREILAALESRLLDF 338
+ LA + L+ +L RF+D +RL ++ A C + P ++++ L+ R D
Sbjct: 305 SELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHP--DLAKDLTEYLKVRSHDP 362
Query: 339 DDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKK 398
++ +R + ++ A+ + V + L++ ER DK+ +RK+A++ L ++Y++Y +
Sbjct: 363 EEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQ 422
Query: 399 CCEGQMTVCDHFEQIPCKILMLCYDKDYKEFRPQNIERILVEDLFPVLEVE---ESTRHW 455
G+ I K+L + Y +R+LVE +F V E+T
Sbjct: 423 SAAGK-DAAKQIAWIKDKLLHIYYQNSID-------DRLLVERIFAQYMVPHNLETTERM 474
Query: 456 VHLFSLFTPLHL---KALNCVLSQKKRFRSEMRYYLSVRKKEKGSCHDETHEQMKNSFVK 512
L+ L+ L L KALN + + R +++ L + K+ K T +K F K
Sbjct: 475 KCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPK------TDASVKAIFSK 528
Query: 513 ---MSASFPDPSKAEGCFQRLNEM--KDNKIFNSLEELLDNM-TIKNAEILRDKFLKLIG 566
++ + PDP KA+ ++ ++ D KI LE L+ + K AE + K +G
Sbjct: 529 VMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLG 588
Query: 567 N-KHPEFEFLQ----LLTSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINL------ 615
N K P FL+ LL D+E + ++ ++ + ED +
Sbjct: 589 NPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRA 648
Query: 616 ---LLAIISIFPSLLRGSEVQFQKLLERNGLINDKLIE----VLAKAG-------PHISI 661
LL ++S + S F+ LL + ++K+ E + G PHI
Sbjct: 649 GLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIR- 707
Query: 662 KYSDIYPLLERLCLEGTRAQSKHAVSAIASLSGASE-QF--VFMELCKGLVDSLHCGRNI 718
S + P+L +G Q+K+A+ I ++ + E QF +F L K L S ++
Sbjct: 708 --SALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPS--NLEHL 763
Query: 719 PTVLQSLGCIAQYSVSAF 736
T L ++G IA + F
Sbjct: 764 ITPLVTIGHIALLAPDQF 781
>sp|Q552Q7|PDS5_DICDI Sister chromatid cohesion protein PDS5 homolog OS=Dictyostelium
discoideum GN=pds5 PE=3 SV=1
Length = 1450
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 178/409 (43%), Gaps = 44/409 (10%)
Query: 50 DIRLSVATCVSELFRILAPEPPFEDNYLRGVFELIISLFKELGNTGCPFFSKRVKILEIV 109
+IRL + C+SE+FRI AP PF+ L+ VF+L + F + ++LE +
Sbjct: 215 EIRLMTSCCLSEIFRIYAPTLPFDMVVLKVVFKLFTEQVLQGDKVDKKLFPQYFQMLERL 274
Query: 110 ARSKCFVIMLDIDCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHMLSTMTHIINEETSLPL 169
+ K F ++ +D + ++ F + S V E + M ST+ + I E SL
Sbjct: 275 SVIKVFALLALVDSS-MLTPFFKDCLSRVHGDKEHQPMDI---MFSTLLNTILE--SLEE 328
Query: 170 LEVVLWN-----LVKQEKDS-PYAASQLAVSVIRNCAEKLEPFVCGFLTSCF-------- 215
+ LWN L+++EK P + + +I + L+ FL
Sbjct: 329 VPTSLWNELLESLIEREKGGVPTSKAIFTHDLIETNSRFLQVHFDLFLQDLLEPEILAGG 388
Query: 216 ---------LDRDAVEGDLKEFYHEIIFKIFQCSPQMLLAVIPNLIQELLVDQVDVRI-K 265
L + + LK+ +EI+F++F P+ + + NL E ++ V+ I K
Sbjct: 389 QQQQQQDSSLSNNGISKQLKKKKNEILFEMFNILPEFIYPALQNL--EFDLEDVNASIRK 446
Query: 266 AVNLIGKIC----AQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFR 321
++ C + D +A R P L+ FL RF D ++R + ++
Sbjct: 447 GAAIVLSRCYSTESASDELIAQR-PTLYTTFLNRFHDVDIKIRTVMMEFSEHFTTTSDL- 504
Query: 322 KESREILAALESRLLDFDDRVRTEAVIVACDLARSHLKFVPEKLISEATERLRDKKISIR 381
E +L ++ R D + +R +A+ + + + + +L+SE ER+RDK +R
Sbjct: 505 -EMERVLKSVRDRFRDSEPDIRIKAIQIFQKYIIKNPELMNPELMSEYLERVRDKDSKVR 563
Query: 382 KKALLKLLEVYREYCKKCC---EGQMTVCDHFEQIPCKIL--MLCYDKD 425
K A + L V+R +K + T+ D F IP ++ + YD D
Sbjct: 564 KDAEISLSTVWRSVREKYGPIDDWSNTLIDCFSTIPNTLIHCLGLYDDD 612
>sp|Q04264|PDS5_YEAST Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PDS5 PE=1 SV=1
Length = 1277
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 160/335 (47%), Gaps = 29/335 (8%)
Query: 35 RKSIIKHGLLHQNDKDIRLSVATCVSELFRILAPEPPFEDNYLRGVFELIISLFKELGNT 94
R +++ LL D IR A C+S++ R+ AP+ P+ D L +F+L++S F++LG+
Sbjct: 56 RDALVSRKLLKHKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQFEQLGDQ 115
Query: 95 GCPFFSKRVKILEIVARSKCFVIMLDI-DCNDLVLQMFNNFFSVVRLCSEPHLSSLTNHM 153
+ ++ ++ + + V++ D+ N+L++++F+ F+ + S P + L N +
Sbjct: 116 ENGYHIQQTYLITKLLEYRSIVLLADLPSSNNLLIELFHIFYDPNK--SFP--ARLFNVI 171
Query: 154 LSTMTHIINEETSLPLLEVVLWNLVKQEKDSPYAASQLAVSVIRNCAEKLEPFVCG---- 209
+ +I+E S+P LEV+ K +P + ++V +C ++ +C
Sbjct: 172 GGILGEVISEFDSVP-LEVLRLIFNKFLTYNPNEIPE-GLNVTSDCGYEVSLILCDTYSN 229
Query: 210 ----FLTSCFLD--RDAVEGDLKEF-------YHEIIFKIFQCSPQMLLAVIPNLIQELL 256
LT + + +A D H+++ ++++ P+++ AVI + EL
Sbjct: 230 RMSRHLTKYYSEIIHEATNDDNNSRLLTVVVKLHKLVLRLWETVPELINAVIGFIYHELS 289
Query: 257 VDQVDVRIKAVNLIGKI-CAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACY 315
+ R +A LIG+I + D + + F ++ + +D S +VR+
Sbjct: 290 SENELFRKEATKLIGQILTSYSDLNFVSTHSDTFKAWISKIADISPDVRVEWTESIPQII 349
Query: 316 LGGPFRKE-SREILAALESRLLDFDDRVRTEAVIV 349
R++ S+E+ AL +D D RVR +V++
Sbjct: 350 AT---REDISKELNQALAKTFIDSDPRVRRTSVMI 381
>sp|P51358|YCF27_PORPU Probable transcriptional regulator ycf27 OS=Porphyra purpurea
GN=ycf27 PE=3 SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 19/131 (14%)
Query: 532 EMKDNKIFNSLEELLDNMTIKNAEILRDKFLKLIGNKHP-------------EFEFLQLL 578
E + + +++ N+ + N+ I+ FLK+ NK EF L+LL
Sbjct: 113 EARIRSVLRRADKITTNLGVPNSGIISIGFLKIDTNKRQVYKNNERVRLTGMEFSLLELL 172
Query: 579 TSKCLYIFDSELVCCIVNGLSSNRYADKHLEDSSINLLLAIISIFPS------LLRGSEV 632
SK F + V G + R+ D + D I+ L A + PS RG+
Sbjct: 173 VSKAGEPFSRASILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPDLILTARGTGY 232
Query: 633 QFQKLLERNGL 643
FQ+++E N L
Sbjct: 233 LFQRIIEMNKL 243
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 232 IIFKIFQCSPQMLLAVIPNLIQEL-LVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFV 290
+I IF+ P ++I L + L +D+ D R + ++G+ + DN AD EL
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN--AD---ELLE 467
Query: 291 EFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI------LAALESRLLDFDDRVRT 344
FL+ F D+S +V+L L +L P E++E+ LA +S D DR
Sbjct: 468 SFLEGFHDESTQVQLTLLTAIVKLFLKKP--SETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 345 EAVIVACDLARSHLKFVPEK-LISEATE 371
+++ D + + EK LISE T+
Sbjct: 526 YWRLLSTDPVTAKEVVLSEKPLISEETD 553
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 232 IIFKIFQCSPQMLLAVIPNLIQEL-LVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFV 290
+I IF+ P ++I L + L +D+ D R + ++G+ + DN AD EL
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN--AD---ELLE 467
Query: 291 EFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI------LAALESRLLDFDDRVRT 344
FL+ F D+S +V+L L +L P E++E+ LA +S D DR
Sbjct: 468 SFLEGFHDESTQVQLTLLTAIVKLFLKKP--SETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 345 EAVIVACDLARSHLKFVPEK-LISEATE 371
+++ D + + EK LISE T+
Sbjct: 526 YWRLLSTDPVTAKEVVLSEKPLISEETD 553
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 232 IIFKIFQCSPQMLLAVIPNLIQEL-LVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFV 290
+I IF+ P ++I L + L +D+ D R + ++G+ + DN AD EL
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN--AD---ELLE 467
Query: 291 EFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI------LAALESRLLDFDDRVRT 344
FL+ F D+S +V+L L +L P E++E+ LA +S D DR
Sbjct: 468 SFLEGFHDESTQVQLTLLTAIVKLFLKKP--SETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 345 EAVIVACDLARSHLKFVPEK-LISEATE 371
+++ D + + EK LISE T+
Sbjct: 526 YWRLLSTDPVTAKEVVLSEKPLISEETD 553
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 232 IIFKIFQCSPQMLLAVIPNLIQEL-LVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFV 290
+I IF+ P ++I L + L +D+ D R + ++G+ + DN AD EL
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN--AD---ELLE 467
Query: 291 EFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI------LAALESRLLDFDDRVRT 344
FL+ F D+S +V+L L +L P E++E+ LA +S D DR
Sbjct: 468 SFLEGFHDESTQVQLTLLTAIVKLFLKKP--SETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 345 EAVIVACDLARSHLKFVPEK-LISEATE 371
+++ D + + EK LISE T+
Sbjct: 526 YWRLLSTDPVTAKEVVLSEKPLISEETD 553
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 232 IIFKIFQCSPQMLLAVIPNLIQEL-LVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFV 290
+I IF+ P ++I L + L +D+ D R + ++G+ + DN AD EL
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN--AD---ELLE 467
Query: 291 EFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI------LAALESRLLDFDDRVRT 344
FL+ F D+S +V+L L +L P E++E+ LA +S D DR
Sbjct: 468 SFLEGFHDESTQVQLTLLTAIVKLFLKKP--SETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 345 EAVIVACDLARSHLKFVPEK-LISEATE 371
+++ D + + EK LISE T+
Sbjct: 526 YWRLLSTDPVTAKEVVLSEKPLISEETD 553
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 36.6 bits (83), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 232 IIFKIFQCSPQMLLAVIPNLIQEL-LVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFV 290
+I IF+ P +VI L + L +D+ + R + ++G+ + DN AD EL
Sbjct: 413 VIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN--AD---ELLE 467
Query: 291 EFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI------LAALESRLLDFDDRVRT 344
FL+ F D+S +V+L L +L P E++E+ LA +S D DR
Sbjct: 468 SFLEGFHDESTQVQLQLLTAIVKLFLKKP--TETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 345 EAVIVACD-LARSHLKFVPEKLISEATE 371
+++ D +A + + LISE T+
Sbjct: 526 YWRLLSTDPVAAKEVVLAEKPLISEETD 553
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 232 IIFKIFQCSPQMLLAVIPNLIQEL-LVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFV 290
+I IF+ P +VI L + L +D+ + R + ++G+ + DN AD EL
Sbjct: 413 VIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN--AD---ELLE 467
Query: 291 EFLKRFSDKSAEVRLNALRCAKACYLGGPFRKESREI------LAALESRLLDFDDRVRT 344
FL+ F D+S +V+L L +L P E++E+ LA +S D DR
Sbjct: 468 SFLEGFHDESTQVQLQLLTAIVKLFLKKP--TETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 345 EAVIVACD-LARSHLKFVPEKLISEATE 371
+++ D +A + + LISE T+
Sbjct: 526 YWRLLSTDPVAAKEVVLAEKPLISEETD 553
>sp|Q9ZS97|AB8I_ARATH UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana
GN=ABCI8 PE=2 SV=1
Length = 557
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 265 KAVNLIGKICAQPDNCLADRYPELFVEFLKRFSDKSAEVRLNALRCAKACYLGGPFRKES 324
+ + LI K+ +PD L R+ + + +FLK K ++ R ++ CY P +K +
Sbjct: 112 ETIRLISKLKEEPDWMLEFRF-KAYAKFLKLEEPKWSDNRYPSINFQDMCYYSAPKKKPT 170
Query: 325 REILAALESRLLDFDDR-------------VRTEAVIVACDLARSHLK 359
L ++ +LL++ D+ V +AVI + +A +H K
Sbjct: 171 LNSLDEVDPQLLEYFDKLGVPLTEQKRLANVAVDAVIDSVSIATTHRK 218
>sp|A2R919|CFT1_ASPNC Protein cft1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=cft1 PE=3 SV=1
Length = 1383
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 29 AATKPLRKSIIKHGL----LHQNDKDIRLSVATCVSELFRILAPEPPFEDNYLRGVFELI 84
+A P RK ++ + + L Q + LSV+ S+LFR++A PP L G EL+
Sbjct: 252 SALLPERKDVVFYTVFTLDLEQQASTVLLSVSRLPSDLFRVVALPPPVGGALLIGSNELV 311
Query: 85 -ISLFKELGNTGCPFFSKRVKILEIVARS-------KCFVIMLDIDCNDLVLQMFNNFFS 136
I + G FS++V + +S C V L D++L + +
Sbjct: 312 HIDQAGKTNAVGVNEFSRQVSSFSMTDQSDLALRLENCIVECLGDSSGDMLLVLTTGEMA 371
Query: 137 VVRL-CSEPHLSSLTNHML 154
+V+ +S ++ H+L
Sbjct: 372 IVKFKLDGRSVSGISVHLL 390
>sp|F5HSE3|NIPLA_DANRE Nipped-B-like protein A OS=Danio rerio GN=nipbla PE=2 SV=1
Length = 2381
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 41 HGLLHQNDKDIRLSVATCVSELFRILAPEPPFEDNYLRGVFELIISLFKELGNTGCPFFS 100
HG L N +R V L R + P + Y + E I+ +TG
Sbjct: 1349 HGRLMDNSTSVR---EAAVELLGRFVLSRPQLTEQYYDMLIERIL-------DTGISVRK 1398
Query: 101 KRVKILEIVARSK---------CFVIMLDIDCNDLVLQMFNNFFSVVRLCSEP-HLSSLT 150
+ +KIL + + C ++ ++ + + ++ N F + P H
Sbjct: 1399 RVIKILRDICLEQPNFSKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKETM 1458
Query: 151 NHMLSTMTHIIN--EETSLPLLEVVLWNLVKQEKDSPYAASQLA-VSVIRNCAEKL 203
N + +T +++ ++T E +L NL+K E+DS Y ++ A V ++ N E +
Sbjct: 1459 NRKILNITDVVSACKDTGYDWFEQLLQNLLKSEEDSSYKPTRKACVQLVDNLVEHI 1514
>sp|P28835|YCF27_PORAE Probable transcriptional regulator ycf27 OS=Porphyridium aerugineum
GN=ycf27 PE=3 SV=1
Length = 240
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 548 NMTIKNAEILRDKFLKLIGNKHP-------------EFEFLQLLTSKCLYIFDSELVCCI 594
N + N+ I+ FLK+ NKH EF L+LL SK F +
Sbjct: 127 NNNLPNSGIINIGFLKIDVNKHQVYKNNERVRLTGMEFSLLELLISKAGQPFSRATILQE 186
Query: 595 VNGLSSNRYADKHLEDSSINLLLAIISIFPS------LLRGSEVQFQKL 637
V G ++ R D + D I+ L A + PS RG+ FQ+L
Sbjct: 187 VWGYTAERQVDTRVVDVHISRLRAKLEDDPSNPDLILTARGTGYLFQRL 235
>sp|Q12453|CEX1_YEAST Cytoplasmic export protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CEX1 PE=1 SV=1
Length = 761
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 44/212 (20%)
Query: 187 AASQLAVSVIRNCAEKLEPFVCGFLTSCFLDRDAVEGDLKEFYHEIIFKIFQCSPQ---- 242
AAS + ++ N + KL PF+ LD + ++++I + F+ +
Sbjct: 311 AASPIGMNF--NASHKLVPFLA-----IVLDLTSETNTFPVGFNDLITQSFKLPDRQVRF 363
Query: 243 MLLAVIPNLIQELLVDQVDVRIKAVNLIGKICAQPDNCLADRYPELFVEFLKRFSDKSAE 302
+LL +P LI L ++ RI YP F++ +D A
Sbjct: 364 LLLIYLPKLIGPLSKSEISSRI--------------------YPH----FIQGLTDSDAT 399
Query: 303 VRLNALR---CAKACYLGGPFRKESREILAALESRLLDFDDRVRTEAVIVACDLARSHLK 359
+RL L+ C +C R+ + E+L L +D D +RT VI+ ++
Sbjct: 400 LRLQTLKTIPCIVSCLTE---RQLNNELLRFLAKTQVDSDVEIRTWTVIIISKISTILST 456
Query: 360 FVPEK---LISEATERLRDKKISIRKKALLKL 388
V + L + T+ L+D ++ R AL L
Sbjct: 457 SVGNRSNILATAFTKSLKDPQVKPRLAALYGL 488
>sp|Q7MIA6|ARGA_VIBVY Amino-acid acetyltransferase OS=Vibrio vulnificus (strain YJ016)
GN=argA PE=3 SV=1
Length = 445
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 250 NLIQELLVDQVDVRIKAVNLIG-----KICAQPDNCLADRYPELFVEFLKRFS---DKSA 301
NL+ E + QV +++KA LIG + + N +A+ +P +F+++ S D +
Sbjct: 185 NLLSEEVATQVAIKLKADKLIGFCSEQGVIDEEGNAVAELFPSDAEKFIQKLSVDVDPDS 244
Query: 302 EVRLNALRCAK----ACYLGGPFRKE--SREILAALESRLLDFDDRVRTEAVIVACDLAR 355
+ LR K AC G P R S +I AL L FD + T+ V+ + + R
Sbjct: 245 DFHSGTLRFLKGAVAACRAGVP-RSHLISYKIDGALIQELFSFDG-IGTQVVMASAEQVR 302
>sp|P59294|ARGA_VIBVU Amino-acid acetyltransferase OS=Vibrio vulnificus (strain CMCP6)
GN=argA PE=3 SV=1
Length = 445
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 250 NLIQELLVDQVDVRIKAVNLIG-----KICAQPDNCLADRYPELFVEFLKRFS---DKSA 301
NL+ E + QV +++KA LIG + + N +A+ +P +F+++ S D +
Sbjct: 185 NLLSEEVATQVAIKLKADKLIGFCSEQGVIDEEGNAVAELFPSDAEKFIQKLSVDVDPDS 244
Query: 302 EVRLNALRCAK----ACYLGGPFRKE--SREILAALESRLLDFDDRVRTEAVIVACDLAR 355
+ LR K AC G P R S +I AL L FD + T+ V+ + + R
Sbjct: 245 DFHSGTLRFLKGAVAACRAGVP-RSHLISYKIDGALIQELFSFDG-IGTQVVMASAEQVR 302
>sp|B7VJZ6|ARGA_VIBSL Amino-acid acetyltransferase OS=Vibrio splendidus (strain LGP32)
GN=argA PE=3 SV=1
Length = 445
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 250 NLIQELLVDQVDVRIKAVNLIG-----KICAQPDNCLADRYPELFVEFLKRFSDK---SA 301
NL+ E + QV +R+KA LIG + + N LA+ +P+ + L+R ++ +
Sbjct: 185 NLLSEEVATQVAIRLKADKLIGFCSEQGVTDESGNVLAELFPKDAKQILERLTESQNPAE 244
Query: 302 EVRLNALRCAK----ACYLGGPF-RKESREILAALESRLLDFDDRVRTEAVIVACDLAR 355
++ LR K AC G P S ++ AL L FD + T+ V+ + + R
Sbjct: 245 DMSTGTLRFLKGAISACRAGVPRCHLISYKVDGALIQELFSFDG-IGTQVVMASAEQVR 302
>sp|Q02004|GP_DUGBA Envelope glycoprotein OS=Dugbe virus (isolate ArD44313) GN=GP PE=1
SV=1
Length = 1551
Score = 34.3 bits (77), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 301 AEVRLNALRCAKACYLGGPFRKESREILAALESRLLDFDD-----RVRTEAVIVACDLAR 355
+ +RL L+C+ G F S I ++ ++L D+ R + V+VA
Sbjct: 1300 SGIRLTGLKCS------GCFSCTS-GISCSVNAKLTSPDEFTLHLRSTSPNVVVA----- 1347
Query: 356 SHLKFVPEKLISEATERLRDKKISIRKKALLKLLEVYREYCKKCCEGQMTVCDHFEQIPC 415
+ K S T R + + KK +++E REYCK C ++T C E P
Sbjct: 1348 -ETSIIARKGPSATTSRFKVFSVRDTKKICFEVVE--REYCKDCTPDELTTCTGVELEPT 1404
Query: 416 KILML 420
K ++L
Sbjct: 1405 KDILL 1409
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,287,438
Number of Sequences: 539616
Number of extensions: 10529728
Number of successful extensions: 29833
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 29724
Number of HSP's gapped (non-prelim): 77
length of query: 757
length of database: 191,569,459
effective HSP length: 125
effective length of query: 632
effective length of database: 124,117,459
effective search space: 78442234088
effective search space used: 78442234088
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)