Query 039887
Match_columns 241
No_of_seqs 215 out of 1268
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:16:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039887.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039887hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3grh_A YBHC, acyl-COA thioeste 100.0 1.5E-53 5E-58 398.7 18.0 185 56-241 62-291 (422)
2 3uw0_A Pectinesterase; right-h 100.0 4.7E-53 1.6E-57 391.3 17.7 172 67-241 28-213 (364)
3 1xg2_A Pectinesterase 1; prote 100.0 8E-53 2.7E-57 383.7 17.9 163 69-241 2-164 (317)
4 1gq8_A Pectinesterase; hydrola 100.0 1.7E-52 6E-57 381.7 18.6 164 68-241 5-168 (319)
5 2nsp_A Pectinesterase A; micha 100.0 1.7E-52 5.7E-57 385.1 17.2 170 69-241 3-186 (342)
6 1ru4_A Pectate lyase, PEL9A; p 99.7 1.1E-15 3.7E-20 142.9 16.5 144 66-232 11-177 (400)
7 1dbg_A Chondroitinase B; beta 99.6 2.4E-14 8.2E-19 137.4 14.2 133 70-230 24-172 (506)
8 2inu_A Insulin fructotransfera 98.9 3.8E-09 1.3E-13 98.4 9.4 121 100-226 58-203 (410)
9 2pyg_A Poly(beta-D-mannuronate 97.8 0.00012 4.1E-09 66.3 11.5 52 81-137 18-78 (377)
10 3eqn_A Glucan 1,3-beta-glucosi 97.4 0.0025 8.5E-08 63.5 14.8 137 81-227 65-221 (758)
11 1qcx_A Pectin lyase B; beta-he 97.3 0.0023 7.9E-08 58.7 12.4 70 158-230 126-201 (359)
12 1idk_A Pectin lyase A; signal, 97.1 0.005 1.7E-07 56.5 11.7 91 113-229 104-200 (359)
13 1pxz_A Major pollen allergen J 97.0 0.006 2.1E-07 55.6 11.8 121 83-228 56-195 (346)
14 1air_A Pectate lyase C, PELC; 96.5 0.035 1.2E-06 50.7 12.6 99 82-208 26-152 (353)
15 3gq8_A Preneck appendage prote 96.4 0.042 1.4E-06 53.6 13.5 136 82-227 39-217 (609)
16 1h80_A IOTA-carrageenase; hydr 96.4 0.021 7.3E-07 54.0 11.0 141 81-227 38-211 (464)
17 1bhe_A PEHA, polygalacturonase 96.4 0.042 1.4E-06 50.1 12.7 52 71-128 14-69 (376)
18 1rmg_A Rgase A, rhamnogalactur 96.1 0.049 1.7E-06 50.7 11.5 42 82-128 37-80 (422)
19 3gqn_A Preneck appendage prote 95.7 0.054 1.8E-06 54.1 10.7 136 82-227 39-217 (772)
20 3zsc_A Pectate trisaccharide-l 95.7 0.075 2.6E-06 48.3 10.9 111 85-226 38-159 (340)
21 1pcl_A Pectate lyase E; lyase 95.6 0.2 7E-06 45.6 13.6 95 85-206 36-153 (355)
22 1nhc_A Polygalacturonase I; be 95.5 0.072 2.5E-06 48.0 9.9 79 157-235 102-203 (336)
23 1hg8_A Endopolygalacturonase; 95.5 0.16 5.5E-06 46.0 12.1 80 155-234 102-215 (349)
24 2uvf_A Exopolygalacturonase; G 95.4 0.16 5.6E-06 49.3 12.8 79 157-235 333-442 (608)
25 2iq7_A Endopolygalacturonase; 95.4 0.04 1.4E-06 49.7 7.7 79 157-235 102-204 (339)
26 2qy1_A Pectate lyase II; GAG l 95.3 0.13 4.3E-06 46.5 10.6 93 83-205 24-137 (330)
27 3vmv_A Pectate lyase; polysacc 95.1 0.13 4.6E-06 46.4 10.4 93 84-205 30-140 (326)
28 1ia5_A Polygalacturonase; glyc 94.3 0.16 5.6E-06 45.7 8.9 79 157-235 106-208 (339)
29 1pe9_A Pectate lyase A; parall 94.3 0.49 1.7E-05 43.3 12.0 94 85-206 44-164 (361)
30 1gq8_A Pectinesterase; hydrola 93.5 0.19 6.6E-06 45.1 7.8 60 156-227 115-174 (319)
31 2o04_A Pectate lyase, PL; hexa 93.5 0.71 2.4E-05 42.7 11.7 67 120-206 127-203 (399)
32 1vbl_A Pectate lyase 47; PL 47 93.4 0.97 3.3E-05 42.1 12.5 67 120-206 132-209 (416)
33 1xg2_A Pectinesterase 1; prote 93.2 0.23 7.8E-06 44.6 7.6 60 156-227 111-170 (317)
34 1czf_A Polygalacturonase II; b 93.2 0.5 1.7E-05 43.0 10.0 67 161-227 133-221 (362)
35 2nsp_A Pectinesterase A; micha 93.0 0.16 5.3E-06 46.2 6.3 56 159-226 136-191 (342)
36 3jur_A EXO-poly-alpha-D-galact 92.0 1.1 3.7E-05 42.0 10.9 69 157-225 192-290 (448)
37 3eqn_A Glucan 1,3-beta-glucosi 90.7 1.8 6.1E-05 43.2 11.2 102 81-205 416-531 (758)
38 2x6w_A Tail spike protein; vir 90.2 1.4 4.7E-05 42.9 9.8 43 81-128 63-119 (600)
39 3uw0_A Pectinesterase; right-h 87.2 1.5 5.1E-05 40.0 7.5 59 156-226 157-218 (364)
40 3grh_A YBHC, acyl-COA thioeste 81.7 5.5 0.00019 37.1 8.7 70 156-226 226-296 (422)
41 1ogo_X Dextranase; hydrolase, 75.5 11 0.00039 36.2 9.1 32 195-226 382-413 (574)
42 1vcl_A Hemolytic lectin CEL-II 71.0 0.018 6E-07 54.1 -11.5 90 74-177 296-394 (432)
43 1czf_A Polygalacturonase II; b 64.1 21 0.0007 32.2 7.8 67 162-230 156-253 (362)
44 1x0c_A Isopullulanase; glycosi 63.3 26 0.00087 33.5 8.6 34 195-228 344-377 (549)
45 1rmg_A Rgase A, rhamnogalactur 62.6 35 0.0012 31.2 9.2 19 195-213 184-202 (422)
46 2iq7_A Endopolygalacturonase; 60.8 39 0.0013 29.9 8.9 57 162-229 162-227 (339)
47 1ogo_X Dextranase; hydrolase, 60.6 29 0.001 33.4 8.5 61 161-232 331-398 (574)
48 1hg8_A Endopolygalacturonase; 59.3 28 0.00095 31.0 7.7 42 187-230 190-240 (349)
49 1k5c_A Endopolygalacturonase; 55.3 22 0.00077 31.5 6.3 35 193-227 158-193 (335)
50 1ia5_A Polygalacturonase; glyc 52.5 32 0.0011 30.5 6.8 68 161-230 134-232 (339)
51 1bhe_A PEHA, polygalacturonase 52.1 24 0.00081 31.6 6.0 20 157-176 153-173 (376)
52 1nhc_A Polygalacturonase I; be 51.5 37 0.0013 30.0 7.1 67 162-230 130-227 (336)
53 2inu_A Insulin fructotransfera 49.7 1.5E+02 0.0051 27.3 11.0 21 156-176 162-184 (410)
54 1k5c_A Endopolygalacturonase; 47.3 1.1E+02 0.0039 26.8 9.7 61 161-232 104-176 (335)
55 1h80_A IOTA-carrageenase; hydr 47.0 46 0.0016 31.1 7.2 60 160-229 172-246 (464)
56 2vbk_A Tailspike-protein; vira 39.7 22 0.00076 33.6 3.8 46 81-130 67-118 (514)
57 1dbg_A Chondroitinase B; beta 36.9 57 0.0019 30.8 6.2 45 156-207 119-170 (506)
58 1x0c_A Isopullulanase; glycosi 35.5 65 0.0022 30.7 6.4 36 193-228 363-405 (549)
59 1ru4_A Pectate lyase, PEL9A; p 32.1 64 0.0022 29.4 5.6 43 188-230 108-151 (400)
60 3jur_A EXO-poly-alpha-D-galact 31.6 1.4E+02 0.0047 27.5 7.9 71 160-230 219-324 (448)
61 3gq8_A Preneck appendage prote 28.7 74 0.0025 30.9 5.5 43 188-230 225-271 (609)
62 2uvf_A Exopolygalacturonase; G 26.0 68 0.0023 30.8 4.8 30 82-115 173-203 (608)
63 3gqn_A Preneck appendage prote 24.9 1E+02 0.0035 30.8 5.9 44 188-231 225-272 (772)
64 3oun_A Putative uncharacterize 22.2 2.3E+02 0.0077 22.3 6.5 57 99-170 67-123 (157)
No 1
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=1.5e-53 Score=398.74 Aligned_cols=185 Identities=22% Similarity=0.325 Sum_probs=156.9
Q ss_pred cccchhhhhhccCCcEEEEcCCCCC--CCchHHHHHHhCC-CCCCceEEEEEcCceEeeeEEecCCCCcEEEecCCCCCc
Q 039887 56 RVLDDKLWKAETNKVRITVCQNGTG--DFKTIREAINSIP-PYNTRRVILEIKPGVYREKVSIPKPLPFVTFLGNSSDPP 132 (241)
Q Consensus 56 ~~~~~~l~~~~~~~~~ivV~~dGsg--~f~TIq~Ai~aap-~~~~~r~vI~I~~G~Y~E~V~I~k~k~~ItL~G~g~~~t 132 (241)
..++|..-.+ ..+++++|++||+| +|+|||+||+++| .++..|++|+|+||+|+|+|+|++.|++|||+|+|.+++
T Consensus 62 ~~w~P~~~~~-~~~~~ivVa~dGsG~~~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t 140 (422)
T 3grh_A 62 AAWNPSPITL-PAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPI 140 (422)
T ss_dssp CCCCCCCCCC-CSSCSEEECSTTCTTCCBSSHHHHHHHHHTTCCSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGG
T ss_pred CCcCCCccCC-CCCccEEEeCCCCCCcCcCCHHHHHHhchhcCCCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCc
Confidence 3566654322 45689999999998 9999999999996 567889999999999999999999999999999999988
Q ss_pred EEEeccCC--C--------------C--C------------CCCCCCCCccCcEEEEEecCceEEEceEEeecCCCCCCC
Q 039887 133 TITGNDTA--S--------------A--T------------GSDGKPLKTFQSATVAVDANYFVAINMKFENTAPHVVGS 182 (241)
Q Consensus 133 iIt~~~~~--~--------------~--~------------~~~G~~~~t~~sat~~V~a~~f~~~nitf~Nta~~~~~~ 182 (241)
+|+...+. . . . ...+..++|++||||.|.+++|+++||||+|+++...+.
T Consensus 141 ~Iti~~~~~~~~~~~d~~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~~~ 220 (422)
T 3grh_A 141 DVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDA 220 (422)
T ss_dssp GEEEEECCCTTSCHHHHHHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGSCS
T ss_pred eEEEeecccccccccccccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCCCC
Confidence 77653210 0 0 0 012235789999999999999999999999999964323
Q ss_pred cccceeeeeeeCCcEEEEeeEEEeeceeEee------------CCCcEEEeccEEEccceeEecCcceEeC
Q 039887 183 MGEQAVALRISGTKAAFYNCSFYGAQDTLYD------------HKGLHYFNNCFIQGSVDFIFGYGRSLYE 241 (241)
Q Consensus 183 ~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~------------~~gr~~~~~C~I~G~vDfIfG~g~a~f~ 241 (241)
.++||||||+.+|+++||||+|+|||||||+ +.|||||++|+|+|+||||||+|+||||
T Consensus 221 ~~~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG~a~AvFe 291 (422)
T 3grh_A 221 GNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFD 291 (422)
T ss_dssp SCCCCCSEEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEESSEEEEE
T ss_pred CCCceEEEEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEeccccEEccCceEEEE
Confidence 4689999999999999999999999999997 5799999999999999999999999996
No 2
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=4.7e-53 Score=391.26 Aligned_cols=172 Identities=33% Similarity=0.500 Sum_probs=143.9
Q ss_pred cCCcEEEEcCC-CCCCCchHHHHHHhCCCCCCceEEEEEcCceEeeeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCC
Q 039887 67 TNKVRITVCQN-GTGDFKTIREAINSIPPYNTRRVILEIKPGVYREKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGS 145 (241)
Q Consensus 67 ~~~~~ivV~~d-Gsg~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~ 145 (241)
+...+++|++| |+|+|+|||+||+++|+++ .|++|+|+||+|+|+|+|+| |+|||+|+++++|+|+++..+.+..+
T Consensus 28 ~~~~~~~V~~~~g~g~f~TIq~Ai~aa~~~~-~~~~I~I~~G~Y~E~v~I~k--~~itl~G~g~~~TiIt~~~~~~~~~~ 104 (364)
T 3uw0_A 28 AAQYNAVVSTTPQGDEFSSINAALKSAPKDD-TPFIIFLKNGVYTERLEVAR--SHVTLKGENRDGTVIGANTAAGMLNP 104 (364)
T ss_dssp ----------------CCCHHHHHHHSCSSS-SCEEEEECSEEECCCEEECS--TTEEEEESCTTTEEEEECCCTTSBCT
T ss_pred ccCceEEEcCCCCCCCcccHHHHHhhcccCC-CcEEEEEeCCEEEEEEEEcC--CeEEEEecCCCCeEEEcccccccccc
Confidence 34578999999 9999999999999999986 78999999999999999986 78999999999999999988776666
Q ss_pred CCCCCCccCcEEEEEecCceEEEceEEeecCCCC----------CCCcccceeeeee--eCCcEEEEeeEEEeeceeEee
Q 039887 146 DGKPLKTFQSATVAVDANYFVAINMKFENTAPHV----------VGSMGEQAVALRI--SGTKAAFYNCSFYGAQDTLYD 213 (241)
Q Consensus 146 ~G~~~~t~~sat~~V~a~~f~~~nitf~Nta~~~----------~~~~~~QAvAlrv--~gd~~~f~nC~f~g~QDTL~~ 213 (241)
+|...+|++++||.|.+++|+++||||+|+++.+ ....++||||||+ .+|+++||||+|+|||||||+
T Consensus 105 ~g~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~ 184 (364)
T 3uw0_A 105 QGEKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYS 184 (364)
T ss_dssp TCSBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEE
T ss_pred ccccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEe
Confidence 6777899999999999999999999999998631 1123689999999 599999999999999999999
Q ss_pred C-CCcEEEeccEEEccceeEecCcceEeC
Q 039887 214 H-KGLHYFNNCFIQGSVDFIFGYGRSLYE 241 (241)
Q Consensus 214 ~-~gr~~~~~C~I~G~vDfIfG~g~a~f~ 241 (241)
+ .|||||++|+|+|+||||||+|+||||
T Consensus 185 ~~~gr~yf~~c~I~GtvDFIFG~a~a~f~ 213 (364)
T 3uw0_A 185 KTGSRSYFSDCEISGHVDFIFGSGITVFD 213 (364)
T ss_dssp CTTCEEEEESCEEEESEEEEEESSEEEEE
T ss_pred CCCCCEEEEcCEEEcCCCEECCcceEEEE
Confidence 9 899999999999999999999999996
No 3
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=8e-53 Score=383.67 Aligned_cols=163 Identities=33% Similarity=0.566 Sum_probs=154.5
Q ss_pred CcEEEEcCCCCCCCchHHHHHHhCCCCCCceEEEEEcCceEeeeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCCC
Q 039887 69 KVRITVCQNGTGDFKTIREAINSIPPYNTRRVILEIKPGVYREKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDGK 148 (241)
Q Consensus 69 ~~~ivV~~dGsg~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~ 148 (241)
+++++|++||+|+|+|||+||+++|+++++|++|+|+||+|+|+|.|++.||||||+|+++++|+|+++.+.. +|
T Consensus 2 ~~~i~V~~dGsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~----~g- 76 (317)
T 1xg2_A 2 IANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVV----DG- 76 (317)
T ss_dssp CCSEEECTTSCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTT----TT-
T ss_pred CceEEECCCCCCCcccHHHHHhhcccCCCceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEeccccc----CC-
Confidence 4679999999999999999999999999999999999999999999999899999999999999999998653 23
Q ss_pred CCCccCcEEEEEecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeeceeEeeCCCcEEEeccEEEcc
Q 039887 149 PLKTFQSATVAVDANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQGS 228 (241)
Q Consensus 149 ~~~t~~sat~~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~G~ 228 (241)
++|+.++||.|.+++|+++||+|+|++++. ++||+||++++|+++||||+|+|+|||||++.+||||++|+|+|+
T Consensus 77 -~~t~~satv~v~a~~f~~~~lt~~Nt~g~~----~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~ 151 (317)
T 1xg2_A 77 -STTFRSATLAAVGQGFILQDICIQNTAGPA----KDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGT 151 (317)
T ss_dssp -CCSGGGCSEEECSTTCEEESCEEEECCCGG----GCCCCSEEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEES
T ss_pred -CcccceeEEEEECCCEEEEEeEEecccCCc----cCceEEEEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEec
Confidence 789999999999999999999999999864 489999999999999999999999999999999999999999999
Q ss_pred ceeEecCcceEeC
Q 039887 229 VDFIFGYGRSLYE 241 (241)
Q Consensus 229 vDfIfG~g~a~f~ 241 (241)
||||||+|++|||
T Consensus 152 vDFIfG~~~avf~ 164 (317)
T 1xg2_A 152 VDFIFGNAAVVFQ 164 (317)
T ss_dssp SSCEEECCEEEEE
T ss_pred eeEEcCCceEEEe
Confidence 9999999999996
No 4
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=1.7e-52 Score=381.73 Aligned_cols=164 Identities=41% Similarity=0.700 Sum_probs=155.2
Q ss_pred CCcEEEEcCCCCCCCchHHHHHHhCCCCCCceEEEEEcCceEeeeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCC
Q 039887 68 NKVRITVCQNGTGDFKTIREAINSIPPYNTRRVILEIKPGVYREKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDG 147 (241)
Q Consensus 68 ~~~~ivV~~dGsg~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G 147 (241)
.+++++|++||+|+|+|||+||+++|++++.|++|+|+||+|+|+|.|++.||||||+|+++++|+|+++.+.. +|
T Consensus 5 ~~~~i~V~~dGsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~----~g 80 (319)
T 1gq8_A 5 VGPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQ----DG 80 (319)
T ss_dssp SCCSEEECTTSCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTT----TT
T ss_pred ccceEEECCCCCCCccCHHHHHHhccccCCceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEeccccc----CC
Confidence 35789999999999999999999999999999999999999999999999899999999999999999988653 23
Q ss_pred CCCCccCcEEEEEecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeeceeEeeCCCcEEEeccEEEc
Q 039887 148 KPLKTFQSATVAVDANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQG 227 (241)
Q Consensus 148 ~~~~t~~sat~~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~G 227 (241)
++|+.++||.|.+++|+++||+|+|++++. ++||+||++++|+++||||+|+|+|||||++.+||||++|+|+|
T Consensus 81 --~~t~~satv~v~a~~f~~~nlt~~Nt~g~~----~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G 154 (319)
T 1gq8_A 81 --STTFNSATVAAVGAGFLARDITFQNTAGAA----KHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAG 154 (319)
T ss_dssp --CCTGGGCSEEECSTTCEEEEEEEEECCCGG----GCCCCSEEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEE
T ss_pred --CCccceEEEEEECCCEEEEEeEeEccCCCc----CCceEEEEecCCcEEEEEeEECccceeeeecCccEEEEecEEEe
Confidence 789999999999999999999999999864 48999999999999999999999999999999999999999999
Q ss_pred cceeEecCcceEeC
Q 039887 228 SVDFIFGYGRSLYE 241 (241)
Q Consensus 228 ~vDfIfG~g~a~f~ 241 (241)
+||||||+|++|||
T Consensus 155 ~vDFIfG~~~a~f~ 168 (319)
T 1gq8_A 155 TVDFIFGNAAVVLQ 168 (319)
T ss_dssp SSSCEEESCEEEEE
T ss_pred eeeEEecCCcEEEE
Confidence 99999999999996
No 5
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=1.7e-52 Score=385.09 Aligned_cols=170 Identities=34% Similarity=0.507 Sum_probs=154.8
Q ss_pred CcEEEEc--CCCCCCCchHHHHHHhCCCCCCceEEEEEcCceEeeeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCC
Q 039887 69 KVRITVC--QNGTGDFKTIREAINSIPPYNTRRVILEIKPGVYREKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSD 146 (241)
Q Consensus 69 ~~~ivV~--~dGsg~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~ 146 (241)
..+++|+ +||+|+|+|||+||+++|+++ .|++|+|+||+|+|+|+|+| ++|||+|+++++|+|+|+..+.+..++
T Consensus 3 ~~~~vV~~~~~g~g~f~TIq~Ai~aap~~~-~~~~I~I~~G~Y~E~V~I~k--~~Itl~G~g~~~tiI~~~~~~~~~~~~ 79 (342)
T 2nsp_A 3 TYNAVVSKSSSDGKTFKTIADAIASAPAGS-TPFVILIKNGVYNERLTITR--NNLHLKGESRNGAVIAAATAAGTLKSD 79 (342)
T ss_dssp CCSEEECSCSSSCSCBSSHHHHHHTSCSSS-SCEEEEECSEEEECCEEECS--TTEEEEESCTTTEEEEECCCTTCBCTT
T ss_pred ccEEEEccCCCCCCCcchHHHHHHhcccCC-CcEEEEEeCCEEEEEEEEec--CeEEEEecCCCCeEEEecccccccccc
Confidence 4689999 999999999999999999987 89999999999999999976 789999999999999999876655556
Q ss_pred CCCCCccCcEEEEEecCceEEEceEEeecCCC----------CCCCcccceeee--eeeCCcEEEEeeEEEeeceeEeeC
Q 039887 147 GKPLKTFQSATVAVDANYFVAINMKFENTAPH----------VVGSMGEQAVAL--RISGTKAAFYNCSFYGAQDTLYDH 214 (241)
Q Consensus 147 G~~~~t~~sat~~V~a~~f~~~nitf~Nta~~----------~~~~~~~QAvAl--rv~gd~~~f~nC~f~g~QDTL~~~ 214 (241)
|...+|+.++||.|.+++|+++||||+|+++. +.+..++||||| ++++|+++||||+|+|+|||||++
T Consensus 80 g~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~ 159 (342)
T 2nsp_A 80 GSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVS 159 (342)
T ss_dssp SCBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEEC
T ss_pred cCcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEEC
Confidence 66688999999999999999999999999831 011236899999 899999999999999999999999
Q ss_pred CCcEEEeccEEEccceeEecCcceEeC
Q 039887 215 KGLHYFNNCFIQGSVDFIFGYGRSLYE 241 (241)
Q Consensus 215 ~gr~~~~~C~I~G~vDfIfG~g~a~f~ 241 (241)
.+||||++|+|+|+||||||+|+||||
T Consensus 160 ~gr~~~~~c~I~G~vDFIFG~a~a~f~ 186 (342)
T 2nsp_A 160 GGRSFFSDCRISGTVDFIFGDGTALFN 186 (342)
T ss_dssp SSEEEEESCEEEESEEEEEESSEEEEE
T ss_pred CCCEEEEcCEEEeceEEEeCCceEEEe
Confidence 999999999999999999999999996
No 6
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.67 E-value=1.1e-15 Score=142.89 Aligned_cols=144 Identities=17% Similarity=0.219 Sum_probs=114.1
Q ss_pred ccCCcEEEEcCCCC----C-----CCchHHHHHHhCCCCCCceEEEEEcCceEe--------eeEEecCCC---CcEEEe
Q 039887 66 ETNKVRITVCQNGT----G-----DFKTIREAINSIPPYNTRRVILEIKPGVYR--------EKVSIPKPL---PFVTFL 125 (241)
Q Consensus 66 ~~~~~~ivV~~dGs----g-----~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~--------E~V~I~k~k---~~ItL~ 125 (241)
...+.++.|+++|+ | .| |||+|++++++++ +|+|++|+|+ |.|.+.++. ..|+|.
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~pGd----tI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~ 85 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVNPGE----LILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVA 85 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCCTTC----EEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCCCCC----EEEECCCeEccccccccceeEEecCCCCCCCCEEEE
Confidence 34567899999875 3 69 9999999999997 9999999999 788887642 239999
Q ss_pred cCCCCCcEEEeccCCCCCCCCCCCCCccCcEEEEEecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEE
Q 039887 126 GNSSDPPTITGNDTASATGSDGKPLKTFQSATVAVDANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFY 205 (241)
Q Consensus 126 G~g~~~tiIt~~~~~~~~~~~G~~~~t~~sat~~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~ 205 (241)
|++.++++|+ ..... |... ..+..|.+.++++++++|+|+|+.. + +|++.+++..|+||+|.
T Consensus 86 ~~~g~~~vI~-~~~~~-----g~~~--~~~~~i~i~~~~~~i~gl~I~n~g~--------~--GI~v~gs~~~i~n~~i~ 147 (400)
T 1ru4_A 86 AANCGRAVFD-FSFPD-----SQWV--QASYGFYVTGDYWYFKGVEVTRAGY--------Q--GAYVIGSHNTFENTAFH 147 (400)
T ss_dssp EGGGCCEEEE-CCCCT-----TCCC--TTCCSEEECSSCEEEESEEEESCSS--------C--SEEECSSSCEEESCEEE
T ss_pred EecCCCCEEe-CCccC-----Cccc--cceeEEEEECCeEEEEeEEEEeCCC--------C--cEEEeCCCcEEEeEEEE
Confidence 9988889998 32111 1001 0135588899999999999999864 2 78888999999999999
Q ss_pred eecee-EeeCCC--cEEEeccEEEccceeE
Q 039887 206 GAQDT-LYDHKG--LHYFNNCFIQGSVDFI 232 (241)
Q Consensus 206 g~QDT-L~~~~g--r~~~~~C~I~G~vDfI 232 (241)
+.+|+ ++...+ +..+++|+|.++.|..
T Consensus 148 ~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~ 177 (400)
T 1ru4_A 148 HNRNTGLEINNGGSYNTVINSDAYRNYDPK 177 (400)
T ss_dssp SCSSCSEEECTTCCSCEEESCEEECCCCTT
T ss_pred CCCceeEEEEcccCCeEEEceEEEcccCcc
Confidence 99995 887642 6889999999998864
No 7
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.57 E-value=2.4e-14 Score=137.39 Aligned_cols=133 Identities=15% Similarity=0.292 Sum_probs=102.6
Q ss_pred cEEEEcCCCCCCCchHHHHHHhCCCCCCceEEEEEcCceEee-eEEecC----CCCcEEEecCCCCCcEEEeccCCCCCC
Q 039887 70 VRITVCQNGTGDFKTIREAINSIPPYNTRRVILEIKPGVYRE-KVSIPK----PLPFVTFLGNSSDPPTITGNDTASATG 144 (241)
Q Consensus 70 ~~ivV~~dGsg~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E-~V~I~k----~k~~ItL~G~g~~~tiIt~~~~~~~~~ 144 (241)
.++.|+ ++.+||+||++|++++ +|+|++|+|+| .+.+.+ .+| |||.|++.++++|.+.
T Consensus 24 ~~i~V~-----~~~~Lq~Ai~~A~pGD----tI~L~~GtY~~~~i~i~~sGt~~~p-Itl~~~~~~~~vi~G~------- 86 (506)
T 1dbg_A 24 LGQVVA-----SNETLYQVVKEVKPGG----LVQIADGTYKDVQLIVSNSGKSGLP-ITIKALNPGKVFFTGD------- 86 (506)
T ss_dssp --CEEC-----SHHHHHHHHHHCCTTC----EEEECSEEEETCEEEECCCCBTTBC-EEEEESSTTSEEEEES-------
T ss_pred eEEEeC-----CHHHHHHHHHhCCCCC----EEEECCCEEecceEEEecCCcCCCC-EEEECCCCCccEEeCC-------
Confidence 345776 3679999999999997 99999999998 888842 335 9999987667888762
Q ss_pred CCCCCCCccCcEEEEEecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeecee--EeeC--------
Q 039887 145 SDGKPLKTFQSATVAVDANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDT--LYDH-------- 214 (241)
Q Consensus 145 ~~G~~~~t~~sat~~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDT--L~~~-------- 214 (241)
.+|.+.++++++++|+|+|+......-......++.+.|+++.+.+|+|.++|++ +|.+
T Consensus 87 -----------~~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l 155 (506)
T 1dbg_A 87 -----------AKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGK 155 (506)
T ss_dssp -----------CEEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEESCCSSCSCSEEECCCTTCC
T ss_pred -----------ceEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEcCCCCceeeEeecccceee
Confidence 3688999999999999999876321000011345667799999999999999998 6653
Q ss_pred -CCcEEEeccEEEccce
Q 039887 215 -KGLHYFNNCFIQGSVD 230 (241)
Q Consensus 215 -~gr~~~~~C~I~G~vD 230 (241)
..+..+++|+|+|+.|
T Consensus 156 ~g~~n~I~~N~I~Gk~~ 172 (506)
T 1dbg_A 156 VPQHCRIDHCSFTDKIT 172 (506)
T ss_dssp CCCSCEEESCEEECCCS
T ss_pred eccccEEECcEEECCcC
Confidence 2467899999999764
No 8
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.90 E-value=3.8e-09 Score=98.42 Aligned_cols=121 Identities=12% Similarity=0.159 Sum_probs=79.7
Q ss_pred EEEEEcCceEe--eeEEecCCCCcEEEecCCCCCc--EEEeccCCCC---CCCCCCCCC----ccCcEEEEEec------
Q 039887 100 VILEIKPGVYR--EKVSIPKPLPFVTFLGNSSDPP--TITGNDTASA---TGSDGKPLK----TFQSATVAVDA------ 162 (241)
Q Consensus 100 ~vI~I~~G~Y~--E~V~I~k~k~~ItL~G~g~~~t--iIt~~~~~~~---~~~~G~~~~----t~~sat~~V~a------ 162 (241)
-+|+|.||+|+ ++|+|+| |+|||.|++...+ +|.++-.... ..+.|..+. ....+.|.|++
T Consensus 58 dvI~L~~G~Y~l~g~ivIdk--p~LtL~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~ 135 (410)
T 2inu_A 58 AAIIIPPGDYDLHTQVVVDV--SYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRL 135 (410)
T ss_dssp EEEECCSEEEEECSCEEECC--TTEEEECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCE
T ss_pred CEEEECCCeeccCCcEEEec--CcEEEEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCccc
Confidence 39999999997 8999987 8899999875322 2664311100 000010000 11346777777
Q ss_pred CceEEEceEEeec-----CCCCCCCcccceeeeeee--CCcEEEEeeEEEeeceeEeeCCC-cEEEeccEEE
Q 039887 163 NYFVAINMKFENT-----APHVVGSMGEQAVALRIS--GTKAAFYNCSFYGAQDTLYDHKG-LHYFNNCFIQ 226 (241)
Q Consensus 163 ~~f~~~nitf~Nt-----a~~~~~~~~~QAvAlrv~--gd~~~f~nC~f~g~QDTL~~~~g-r~~~~~C~I~ 226 (241)
+++++++++|++. ..... .+-.+|++. +|++.+.+|+|.+....+|.+.. ..-.++|.|+
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~----~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~ 203 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYH----NGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIA 203 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCC----CSCEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEE
T ss_pred CCcEECCEEEECCEeecCCCCcc----cCceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEE
Confidence 5555555555555 54432 677889886 78899999999999999998753 4556777777
No 9
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.84 E-value=0.00012 Score=66.30 Aligned_cols=52 Identities=19% Similarity=0.137 Sum_probs=40.4
Q ss_pred CCchHHHHHHhCCCCCCceEEEEEcCceEee---------eEEecCCCCcEEEecCCCCCcEEEec
Q 039887 81 DFKTIREAINSIPPYNTRRVILEIKPGVYRE---------KVSIPKPLPFVTFLGNSSDPPTITGN 137 (241)
Q Consensus 81 ~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E---------~V~I~k~k~~ItL~G~g~~~tiIt~~ 137 (241)
+-..||+||+++++. +.-+|+|.||+|+. .+.++ ++++|+|+|+..++|...
T Consensus 18 dt~aiq~Ai~~a~~~--gg~~v~~p~G~y~~~~~~~~~~g~l~~~---~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 18 DRASIQAAIDAAYAA--GGGTVYLPAGEYRVSAAGEPGDGCLMLK---DGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CHHHHHHHHHHHHHT--TSEEEEECSEEEEECCCSSGGGCSEECC---TTEEEEESSBTTEEEEEC
T ss_pred hHHHHHHHHHHHHhc--CCCEEEECCeEEEEcccccCCcccEEec---CCeEEEEcCCCCcEEEec
Confidence 457899999998652 12489999999996 56664 479999999877877664
No 10
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=97.43 E-value=0.0025 Score=63.50 Aligned_cols=137 Identities=17% Similarity=0.259 Sum_probs=81.8
Q ss_pred CCchHHHHHHhCCCCC-------CceEEEEEcCceEe--eeEEecCCCCcEEEecCCCCCcEEEeccCCCCCC-CCCCCC
Q 039887 81 DFKTIREAINSIPPYN-------TRRVILEIKPGVYR--EKVSIPKPLPFVTFLGNSSDPPTITGNDTASATG-SDGKPL 150 (241)
Q Consensus 81 ~f~TIq~Ai~aap~~~-------~~r~vI~I~~G~Y~--E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~-~~G~~~ 150 (241)
|=.-||+||+++.... ..+-+|++.+|+|. ..|.++ .++.|+|++.+.++|....+..... -+++++
T Consensus 65 DT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~---~~t~L~G~~~~~pvIka~~~F~G~~li~~d~y 141 (758)
T 3eqn_A 65 DTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL---YQTQLIGDAKNLPTLLAAPNFSGIALIDADPY 141 (758)
T ss_dssp CHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECC---TTEEEEECSSSCCEEEECTTCCSSCSEESSCB
T ss_pred hHHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEcc---CCeEEEecCCCCCeEecCCCCCCcceeecccc
Confidence 3467999999875421 34568999999998 457775 4799999999888887654432110 011111
Q ss_pred CccCcEEEEEec--CceEEEceEEeecCCCCCCCcccceeeeeee-CCcEEEEeeEEEee------ceeEeeCCC-cEEE
Q 039887 151 KTFQSATVAVDA--NYFVAINMKFENTAPHVVGSMGEQAVALRIS-GTKAAFYNCSFYGA------QDTLYDHKG-LHYF 220 (241)
Q Consensus 151 ~t~~sat~~V~a--~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~-gd~~~f~nC~f~g~------QDTL~~~~g-r~~~ 220 (241)
... ..-..... -+-.++||+|..+..+. .+.+|+.. +....+.||.|... ++.|+.+.| --+.
T Consensus 142 ~~~-G~~w~~~~~~F~r~irNlviD~t~~~~------~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i 214 (758)
T 3eqn_A 142 LAG-GAQYYVNQNNFFRSVRNFVIDLRQVSG------SATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFL 214 (758)
T ss_dssp CGG-GCBSSCGGGCCCEEEEEEEEECTTCSS------CEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEE
T ss_pred CCC-CccccccccceeeeecceEEeccccCC------CceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEE
Confidence 000 00000011 23457888887655432 26667664 66677788888762 556665432 3566
Q ss_pred eccEEEc
Q 039887 221 NNCFIQG 227 (241)
Q Consensus 221 ~~C~I~G 227 (241)
.||+|+|
T Consensus 215 ~Dl~f~G 221 (758)
T 3eqn_A 215 GDLVFNG 221 (758)
T ss_dssp EEEEEES
T ss_pred EeeEEeC
Confidence 7777763
No 11
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.32 E-value=0.0023 Score=58.73 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=49.6
Q ss_pred EEE--ecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeeceeEee----CCCcEEEeccEEEccce
Q 039887 158 VAV--DANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDTLYD----HKGLHYFNNCFIQGSVD 230 (241)
Q Consensus 158 ~~V--~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~----~~gr~~~~~C~I~G~vD 230 (241)
|.+ .+++++++||+|++...... .+..++-+. .++++-+.+|+|....|-++. ....--+.+|+|.+..|
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~--~~~DaI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~ 201 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYV--WGGDAITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSD 201 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEE--TSCCSEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCS
T ss_pred EEEecCCCCEEEeCcEEEecCCccc--ccCceeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCcc
Confidence 667 67999999999999754321 123344443 478899999999988887763 12356677899998755
No 12
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.06 E-value=0.005 Score=56.50 Aligned_cols=91 Identities=16% Similarity=0.265 Sum_probs=61.0
Q ss_pred EEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCCCCCCccCcEEEEE--ecCceEEEceEEeecCCCCCCCcccceeee
Q 039887 113 VSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDGKPLKTFQSATVAV--DANYFVAINMKFENTAPHVVGSMGEQAVAL 190 (241)
Q Consensus 113 V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~~~~t~~sat~~V--~a~~f~~~nitf~Nta~~~~~~~~~QAvAl 190 (241)
|.|. +|+||.|.|.+ ..|.+. -|.+ .+++++++||+|++..+... .+..++-|
T Consensus 104 l~v~---snkTI~G~G~~-~~i~G~-------------------gl~i~~~a~NVIIrnL~i~~~~~~~~--~g~DaI~i 158 (359)
T 1idk_A 104 ITVT---SNKSLIGEGSS-GAIKGK-------------------GLRIVSGAENIIIQNIAVTDINPKYV--WGGDAITL 158 (359)
T ss_dssp EEEC---SSEEEEECTTT-CEEESC-------------------CEEECTTCEEEEEESCEEEEECTTEE--TSCCSEEE
T ss_pred EEeC---CCceEEEecCC-eEEecc-------------------eEEEecCCCcEEEeCeEEEccccccc--ccCCceee
Confidence 5553 47899998754 345441 1566 57899999999998533110 12334444
Q ss_pred eeeCCcEEEEeeEEEeeceeEeeC----CCcEEEeccEEEccc
Q 039887 191 RISGTKAAFYNCSFYGAQDTLYDH----KGLHYFNNCFIQGSV 229 (241)
Q Consensus 191 rv~gd~~~f~nC~f~g~QDTL~~~----~gr~~~~~C~I~G~v 229 (241)
. .++++-+.+|+|...-|-++.. ...--+.+|+|.|.-
T Consensus 159 ~-~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 159 D-DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp C-SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBC
T ss_pred c-CCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCc
Confidence 3 4788999999999887877742 345667789998754
No 13
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.01 E-value=0.006 Score=55.63 Aligned_cols=121 Identities=12% Similarity=0.043 Sum_probs=80.5
Q ss_pred chHHHHHHhCCCCCCceEEEEEcCceEe--eeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCCCCCCccCcEEEE-
Q 039887 83 KTIREAINSIPPYNTRRVILEIKPGVYR--EKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDGKPLKTFQSATVA- 159 (241)
Q Consensus 83 ~TIq~Ai~aap~~~~~r~vI~I~~G~Y~--E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~~~~t~~sat~~- 159 (241)
-|+++||.+.. .+.+|+...|+++ +.|.|. +++||.|.+. ...|.+.. ..+.
T Consensus 56 GsLr~av~~~~----P~~Ivf~~~g~I~l~~~l~V~---sn~TI~G~ga-~~~i~G~G-----------------~gi~i 110 (346)
T 1pxz_A 56 GTLRYGATREK----ALWIIFSQNMNIKLKMPLYVA---GHKTIDGRGA-DVHLGNGG-----------------PCLFM 110 (346)
T ss_dssp TSHHHHHHCSS----CEEEEESSCEEECCSSCEECC---SSEEEECTTS-CEEEETTS-----------------CCEEE
T ss_pred chhHHHhccCC----CeEEEEcCCcEEecCccEEec---CCeEEEccCC-ceEEeCCc-----------------ceEEE
Confidence 47999998733 3567777789997 677774 3799999976 34566521 1122
Q ss_pred EecCceEEEceEEeecCCCCC-----------C-Ccccceeeeeee-CCcEEEEeeEEEeeceeEee---CCCcEEEecc
Q 039887 160 VDANYFVAINMKFENTAPHVV-----------G-SMGEQAVALRIS-GTKAAFYNCSFYGAQDTLYD---HKGLHYFNNC 223 (241)
Q Consensus 160 V~a~~f~~~nitf~Nta~~~~-----------~-~~~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~---~~gr~~~~~C 223 (241)
..+++++++||+|++..+... + ......-||.+. +.++-+.+|.|....|-|++ .+..--+.+|
T Consensus 111 ~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn 190 (346)
T 1pxz_A 111 RKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNN 190 (346)
T ss_dssp ESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESC
T ss_pred EccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEee
Confidence 357899999999998743210 0 001223456664 57789999999988999863 2345667778
Q ss_pred EEEcc
Q 039887 224 FIQGS 228 (241)
Q Consensus 224 ~I~G~ 228 (241)
+|...
T Consensus 191 ~f~~H 195 (346)
T 1pxz_A 191 HFFNH 195 (346)
T ss_dssp EEESE
T ss_pred EEecC
Confidence 77744
No 14
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=96.48 E-value=0.035 Score=50.74 Aligned_cols=99 Identities=12% Similarity=0.157 Sum_probs=61.1
Q ss_pred CchHHHHHHhCCC--------CCCceEEEEEcCceE------------------eeeEEecCCCCcEEEecCCCCCcEEE
Q 039887 82 FKTIREAINSIPP--------YNTRRVILEIKPGVY------------------REKVSIPKPLPFVTFLGNSSDPPTIT 135 (241)
Q Consensus 82 f~TIq~Ai~aap~--------~~~~r~vI~I~~G~Y------------------~E~V~I~k~k~~ItL~G~g~~~tiIt 135 (241)
..++++||+++.. ...++.+|.| .|+- ...+.|....+|+||+|... + +.
T Consensus 26 ~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v-~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~--~-~~ 101 (353)
T 1air_A 26 MQDIVNIIDAARLDANGKKVKGGAYPLVITY-TGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANG--S-SA 101 (353)
T ss_dssp HHHHHHHHHHTTBCTTSCBCTBCSSCEEEEE-CCCCHHHHHHHHTSGGGSTTSCCCEEEEESBCSCEEEEECTT--C-CB
T ss_pred HHHHHHHHHhhccccccccccCCCceEEEEE-ccEEeccccccccccccccccCCCceEEEecCCCEEEEeccC--C-CC
Confidence 4689999988752 2355777887 4542 14566654335788888632 1 11
Q ss_pred eccCCCCCCCCCCCCCccCcEEEEE-ecCceEEEceEEeecCCCCCCCcccceeeeee-eCCcEEEEeeEEEeec
Q 039887 136 GNDTASATGSDGKPLKTFQSATVAV-DANYFVAINMKFENTAPHVVGSMGEQAVALRI-SGTKAAFYNCSFYGAQ 208 (241)
Q Consensus 136 ~~~~~~~~~~~G~~~~t~~sat~~V-~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv-~gd~~~f~nC~f~g~Q 208 (241)
| ..|.+ .+++++++||+|++.... ....-||.+ .++++-+.+|.|..-+
T Consensus 102 -----------g--------~gl~i~~~~NVIIrnl~i~~~~~~-----~~~~DaI~i~~s~nVWIDH~s~s~~~ 152 (353)
T 1air_A 102 -----------N--------FGIWIKKSSDVVVQNMRIGYLPGG-----AKDGDMIRVDDSPNVWVDHNELFAAN 152 (353)
T ss_dssp -----------S--------SEEEEESCCSEEEESCEEESCSCG-----GGTCCSEEEESCCSEEEESCEEECCS
T ss_pred -----------C--------ceEEEeccCcEEEeccEEEeCCCC-----CCCCCeEEeeCCCcEEEEeeEEecCC
Confidence 1 12444 569999999999964321 112233444 4688999999997543
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=96.43 E-value=0.042 Score=53.60 Aligned_cols=136 Identities=15% Similarity=0.242 Sum_probs=77.0
Q ss_pred CchHHHHHHhCCCCCCceEEEEEcCceEee--eEEecCCCCcEEEecCCCCCcEEEeccCCCCC---------CC-----
Q 039887 82 FKTIREAINSIPPYNTRRVILEIKPGVYRE--KVSIPKPLPFVTFLGNSSDPPTITGNDTASAT---------GS----- 145 (241)
Q Consensus 82 f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E--~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~---------~~----- 145 (241)
=.-||+||++. + +|+|.+|+|.- .|.++ .+++|.|++...++|.+....... ..
T Consensus 39 T~Aiq~Ai~~G--g-----~V~iP~GtYlis~~l~l~---snv~L~g~g~~~t~L~~~~~~p~~~~li~~lI~a~~~~NI 108 (609)
T 3gq8_A 39 IRAFEKAIESG--F-----PVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGNENI 108 (609)
T ss_dssp HHHHHHHHHTS--S-----CEEECSEEEEESSCEEEC---SSEEEEESCTTTEEEEECTTCCSSCCSEEESCTTTCCEEE
T ss_pred HHHHHHHHHcC--C-----EEEECCccEEEeCceEEC---CCcEEEEeeCCCCEEEeCCCCCCCCceeeeeeeecccccE
Confidence 35699999973 2 79999999984 57775 369999998766777654321100 00
Q ss_pred -------CCC--CCC-------ccCcEEEEE-ecCceEEEceEEeecCCCCC----CCc----ccceeeeeeeCCcEEEE
Q 039887 146 -------DGK--PLK-------TFQSATVAV-DANYFVAINMKFENTAPHVV----GSM----GEQAVALRISGTKAAFY 200 (241)
Q Consensus 146 -------~G~--~~~-------t~~sat~~V-~a~~f~~~nitf~Nta~~~~----~~~----~~QAvAlrv~gd~~~f~ 200 (241)
||. ..+ ..+...|.+ ..+++.++||+|+|+..... +.. ..+...+.+...++.+.
T Consensus 109 tItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~ 188 (609)
T 3gq8_A 109 FLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIE 188 (609)
T ss_dssp EEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEE
T ss_pred EEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEE
Confidence 120 000 112222333 45789999999999864210 000 00111111224678888
Q ss_pred eeEEEeece-eEeeCC-CcEEEeccEEEc
Q 039887 201 NCSFYGAQD-TLYDHK-GLHYFNNCFIQG 227 (241)
Q Consensus 201 nC~f~g~QD-TL~~~~-gr~~~~~C~I~G 227 (241)
||.|.+.+| .+..+. -.-.+++|+++|
T Consensus 189 Nc~I~~tGDDcIaIksseNI~I~Nc~~~g 217 (609)
T 3gq8_A 189 NCEATGFGDDGITTHHSQYINILNCYSHD 217 (609)
T ss_dssp SCEEESCSSCSEEECSCEEEEEESCEEEC
T ss_pred eeEEEecCCCEEEecCCeeEEEEeEEEEC
Confidence 888876544 454433 345677777743
No 16
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=96.39 E-value=0.021 Score=53.98 Aligned_cols=141 Identities=15% Similarity=0.052 Sum_probs=71.1
Q ss_pred CCchHHHHHHhCCCCCCceEEEEEcCceEe-eeEEecCCCCcEEEecCCCCCcEEEeccC--C-----------CC----
Q 039887 81 DFKTIREAINSIPPYNTRRVILEIKPGVYR-EKVSIPKPLPFVTFLGNSSDPPTITGNDT--A-----------SA---- 142 (241)
Q Consensus 81 ~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~-E~V~I~k~k~~ItL~G~g~~~tiIt~~~~--~-----------~~---- 142 (241)
+=.-||+|++++... .+.-+|+|.+|+|. ..|.++ .+++|..++. ++|.+... . ..
T Consensus 38 dT~Aiq~Aidac~~~-~ggg~V~vP~GtYl~g~I~lk---s~v~L~l~~G--atL~~s~~td~~~y~~~~~~~~~~~~nI 111 (464)
T 1h80_A 38 DSNALQRAINAISRK-PNGGTLLIPNGTYHFLGIQMK---SNVHIRVESD--VIIKPTWNGDGKNHRLFEVGVNNIVRNF 111 (464)
T ss_dssp CHHHHHHHHHHHHTS-TTCEEEEECSSEEEECSEECC---TTEEEEECTT--CEEEECCCTTCSCEEEEEESSSSCEEEE
T ss_pred hHHHHHHHHHHHhhc-cCCcEEEECCCeEEEeeEecc---CceEEEEcCC--cEEEeccCCCcccCCceEeecccCccce
Confidence 456799999987321 01248999999996 345553 3566665421 22222210 0 00
Q ss_pred --CCC------CCCCCCccCcEEEEEe-cCceEEEceEEeecCCCCCCC--cccceeeeeeeCCcEEEEeeEEEeeceeE
Q 039887 143 --TGS------DGKPLKTFQSATVAVD-ANYFVAINMKFENTAPHVVGS--MGEQAVALRISGTKAAFYNCSFYGAQDTL 211 (241)
Q Consensus 143 --~~~------~G~~~~t~~sat~~V~-a~~f~~~nitf~Nta~~~~~~--~~~QAvAlrv~gd~~~f~nC~f~g~QDTL 211 (241)
.|. ||...+..+...|.+. ..++.++||+|+|........ ..+..-++.+..+++.+.||.|.+.-|++
T Consensus 112 tI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i~s~nV~I~n~~I~~gddgi 191 (464)
T 1h80_A 112 SFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLHWSRNGIIERIKQNNALFGY 191 (464)
T ss_dssp EEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEEEEEEEEEEEEEEESCCTTC
T ss_pred EEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCceeeccCEEEeceEEecCCCeE
Confidence 000 1211111122234444 578999999999954321100 00000112335567777777777665554
Q ss_pred e-e---CCCcEEEeccEEEc
Q 039887 212 Y-D---HKGLHYFNNCFIQG 227 (241)
Q Consensus 212 ~-~---~~gr~~~~~C~I~G 227 (241)
. . ..-.-.++||++.|
T Consensus 192 Gs~~~~~~~NV~V~n~~~~g 211 (464)
T 1h80_A 192 GLIQTYGADNILFRNLHSEG 211 (464)
T ss_dssp EEEEESEEEEEEEEEEEEES
T ss_pred EecccCCEeEEEEEeeEEEC
Confidence 2 1 12345667777666
No 17
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=96.39 E-value=0.042 Score=50.12 Aligned_cols=52 Identities=19% Similarity=0.203 Sum_probs=32.3
Q ss_pred EEEEcCCCCC-CCchHHHHHHhCCCCCCceEEEEEcC--ceEe-eeEEecCCCCcEEEecCC
Q 039887 71 RITVCQNGTG-DFKTIREAINSIPPYNTRRVILEIKP--GVYR-EKVSIPKPLPFVTFLGNS 128 (241)
Q Consensus 71 ~ivV~~dGsg-~f~TIq~Ai~aap~~~~~r~vI~I~~--G~Y~-E~V~I~k~k~~ItL~G~g 128 (241)
+..|-..|.. +=..||+||++++.+. + ++++.| |+|. ..|.++. +++|..++
T Consensus 14 ~~~v~~~G~~~dT~aiq~Ai~ac~~Gg--~-v~~~~~~~g~yl~g~i~l~s---~vtL~l~~ 69 (376)
T 1bhe_A 14 SCTTLKADSSTATSTIQKALNNCDQGK--A-VRLSAGSTSVFLSGPLSLPS---GVSLLIDK 69 (376)
T ss_dssp EEEEEECCSSBCHHHHHHHHTTCCTTC--E-EEEECSSSSEEEESCEECCT---TCEEEECT
T ss_pred eEEECCCCCCccHHHHHHHHHHhccCC--c-EEEECCCCceEEEeEEEECC---CCEEEECC
Confidence 4555544432 3356999999988753 2 334443 8997 5677753 57776654
No 18
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=96.07 E-value=0.049 Score=50.67 Aligned_cols=42 Identities=14% Similarity=0.063 Sum_probs=29.8
Q ss_pred CchHHHHHHhCCCCCCceEEEEEcCceEee--eEEecCCCCcEEEecCC
Q 039887 82 FKTIREAINSIPPYNTRRVILEIKPGVYRE--KVSIPKPLPFVTFLGNS 128 (241)
Q Consensus 82 f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E--~V~I~k~k~~ItL~G~g 128 (241)
=.-||+||+++..+. +|+|.+|+|.- .|.+... .+++|..+|
T Consensus 37 T~Aiq~Ai~ac~~g~----~V~vP~G~Yli~~~l~l~g~-s~v~l~l~G 80 (422)
T 1rmg_A 37 GPAITSAWAACKSGG----LVYIPSGNYALNTWVTLTGG-SATAIQLDG 80 (422)
T ss_dssp HHHHHHHHHHHTBTC----EEEECSSEEEECSCEEEESC-EEEEEEECS
T ss_pred HHHHHHHHHHCCCCC----EEEECCCeEEeCCceeecCC-CeEEEEEcC
Confidence 456999999876543 88999999984 3666532 356666554
No 19
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=95.75 E-value=0.054 Score=54.10 Aligned_cols=136 Identities=15% Similarity=0.244 Sum_probs=76.6
Q ss_pred CchHHHHHHhCCCCCCceEEEEEcCceEee--eEEecCCCCcEEEecCCCCCcEEEeccCCCC---------CCC-----
Q 039887 82 FKTIREAINSIPPYNTRRVILEIKPGVYRE--KVSIPKPLPFVTFLGNSSDPPTITGNDTASA---------TGS----- 145 (241)
Q Consensus 82 f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E--~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~---------~~~----- 145 (241)
=.-||+||++. + +|+|.+|+|.- .|.++. +++|.|++...++|.+...... ...
T Consensus 39 T~Aiq~Ai~aG--g-----~V~IPaGtYlisg~I~L~s---nv~L~Geg~~~t~Lk~~~d~p~~~~li~~lI~a~gveNI 108 (772)
T 3gqn_A 39 IRAFEKAIESG--F-----PVYVPYGTFMVSRGIKLPS---NTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGNENI 108 (772)
T ss_dssp HHHHHHHHHTT--S-----CEEECSEEEEESSCEEECS---SCEEEEEEEEEEEEEECTTCCSSCCSEEESCTTTCCEEE
T ss_pred HHHHHHHHHcC--C-----EEEECCccEEEEeEEEECC---CcEEEEecCCCCEEEeCCCCCCCCceeeeeeeccCceeE
Confidence 35699999973 2 79999999985 577753 6888887744455554322100 000
Q ss_pred -------CCC--CCC-------ccCcEEEEE-ecCceEEEceEEeecCCCCC----CCc----ccceeeeeeeCCcEEEE
Q 039887 146 -------DGK--PLK-------TFQSATVAV-DANYFVAINMKFENTAPHVV----GSM----GEQAVALRISGTKAAFY 200 (241)
Q Consensus 146 -------~G~--~~~-------t~~sat~~V-~a~~f~~~nitf~Nta~~~~----~~~----~~QAvAlrv~gd~~~f~ 200 (241)
||+ ..+ ..+...|.+ ..+++.++||+|+|+..... +.. +.....+.+.+.++.+.
T Consensus 109 tItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~ 188 (772)
T 3gqn_A 109 FLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIE 188 (772)
T ss_dssp EEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEE
T ss_pred EEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEE
Confidence 110 000 112223333 45789999999999865210 000 01111122234678899
Q ss_pred eeEEEeece-eEeeCC-CcEEEeccEEEc
Q 039887 201 NCSFYGAQD-TLYDHK-GLHYFNNCFIQG 227 (241)
Q Consensus 201 nC~f~g~QD-TL~~~~-gr~~~~~C~I~G 227 (241)
||.|.+.+| .+..+. -.-.++||++.|
T Consensus 189 Nc~I~ntGDDcIAIksSeNI~I~Nc~c~g 217 (772)
T 3gqn_A 189 NCEATGFGDDGITTHHSQYINILNCYSHD 217 (772)
T ss_dssp SCEEESCSSCSEEECSCEEEEEESCEEEC
T ss_pred eeEEEecCcCeEEecCCceEEEEeEEEEC
Confidence 999977554 455543 356778888854
No 20
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=95.73 E-value=0.075 Score=48.35 Aligned_cols=111 Identities=12% Similarity=0.140 Sum_probs=71.5
Q ss_pred HHHHHHhCCCCCCceEEEEEcCceEe----eeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCCCCCCccCcEEEEE
Q 039887 85 IREAINSIPPYNTRRVILEIKPGVYR----EKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDGKPLKTFQSATVAV 160 (241)
Q Consensus 85 Iq~Ai~aap~~~~~r~vI~I~~G~Y~----E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~~~~t~~sat~~V 160 (241)
+.+||.. ++|.+|.| .|+.. +.|.|. +|+||.|.+.. .|.+. -|.+
T Consensus 38 Lr~al~~-----~~PriIvv-~G~I~~~~~~~l~v~---snkTI~G~ga~--~I~G~-------------------Gi~I 87 (340)
T 3zsc_A 38 LEKYTTA-----EGKYVIVV-DGTIVFEPKREIKVL---SDKTIVGINDA--KIVGG-------------------GLVI 87 (340)
T ss_dssp HHHHHTS-----SSCEEEEE-EEEEEEEEEEEEEEC---SSEEEEEEEEE--EEEEE-------------------EEEE
T ss_pred HHHHHhC-----CCCEEEEE-CcEEEeCCcceEEec---CCCEEEeccCc--EEecC-------------------ceEE
Confidence 6666642 23445655 68876 457773 58999999865 56652 1334
Q ss_pred -ecCceEEEceEEeecCCCCCC---CcccceeeeeeeCCcEEEEeeEEEeeceeEeeC---CCcEEEeccEEE
Q 039887 161 -DANYFVAINMKFENTAPHVVG---SMGEQAVALRISGTKAAFYNCSFYGAQDTLYDH---KGLHYFNNCFIQ 226 (241)
Q Consensus 161 -~a~~f~~~nitf~Nta~~~~~---~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~---~gr~~~~~C~I~ 226 (241)
.+++++++||+|++....... ..+..++-+. .++++-+.+|.|....|-+++- ...--+.+|+|.
T Consensus 88 ~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~ 159 (340)
T 3zsc_A 88 KDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFV 159 (340)
T ss_dssp ESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEE
T ss_pred EcCceEEEeCeEEECCccccCccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceEEecCCceEEEECcEec
Confidence 478999999999997532110 0123334343 3688999999999888887762 234556677776
No 21
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=95.65 E-value=0.2 Score=45.64 Aligned_cols=95 Identities=17% Similarity=0.257 Sum_probs=56.7
Q ss_pred HHHHHHhCCCCCCceEEEEEcCceEe----------------eeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCCC
Q 039887 85 IREAINSIPPYNTRRVILEIKPGVYR----------------EKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDGK 148 (241)
Q Consensus 85 Iq~Ai~aap~~~~~r~vI~I~~G~Y~----------------E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~ 148 (241)
+++||.+ ..+.|.+|.| .|++. .+|.|. +|+||.|.|.+ ..|.+.
T Consensus 36 L~~al~~---~~~~p~VI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v~---sn~TI~G~G~~-~~i~g~----------- 96 (355)
T 1pcl_A 36 FKKALNG---TDSSAKIIKV-TGPIDISGGKAYTSFDDQKARSQISIP---SNTTIIGVGSN-GKFTNG----------- 96 (355)
T ss_pred HHHHHhh---CCCCcEEEEE-CCEEecCCccccccccccccceeEEeC---CCeEEEEecCC-eEEecC-----------
Confidence 5666643 2334556665 57775 244553 57999998754 334431
Q ss_pred CCCccCcEEEEE-ecCceEEEceEEeecCCCCC---C--Ccccceeeeee-eCCcEEEEeeEEEe
Q 039887 149 PLKTFQSATVAV-DANYFVAINMKFENTAPHVV---G--SMGEQAVALRI-SGTKAAFYNCSFYG 206 (241)
Q Consensus 149 ~~~t~~sat~~V-~a~~f~~~nitf~Nta~~~~---~--~~~~QAvAlrv-~gd~~~f~nC~f~g 206 (241)
-|.+ .+++++++||+|++...... + +.+...-||.+ .+.++-+.+|.|..
T Consensus 97 --------gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~ 153 (355)
T 1pcl_A 97 --------SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISD 153 (355)
T ss_pred --------EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEec
Confidence 2344 56999999999998642110 0 00122335555 46789999999874
No 22
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=95.49 E-value=0.072 Score=47.95 Aligned_cols=79 Identities=16% Similarity=0.176 Sum_probs=44.1
Q ss_pred EEEE-ecCceEEEceEEeecCCCCC---------------CCc-----ccceeeeeee-CCcEEEEeeEEEeeceeEeeC
Q 039887 157 TVAV-DANYFVAINMKFENTAPHVV---------------GSM-----GEQAVALRIS-GTKAAFYNCSFYGAQDTLYDH 214 (241)
Q Consensus 157 t~~V-~a~~f~~~nitf~Nta~~~~---------------~~~-----~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~~ 214 (241)
.+.+ ..+++.++||+|+|+..... ... ..-.-++.+. ++++.+.||.|..--|.+...
T Consensus 102 ~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaik 181 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNTPVQAISVQATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAIN 181 (336)
T ss_dssp CEEEEEEEEEEEESCEEECCSSCCEEEEEEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEES
T ss_pred EEEEeeeCcEEEEEEEEEeCCccEEEEEeCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEe
Confidence 3444 46788899999988743210 000 0112334443 356777777776555666655
Q ss_pred CC-cEEEeccEEEccceeEecC
Q 039887 215 KG-LHYFNNCFIQGSVDFIFGY 235 (241)
Q Consensus 215 ~g-r~~~~~C~I~G~vDfIfG~ 235 (241)
.+ .-.+++|+..+.-.+-+|.
T Consensus 182 sg~nI~i~n~~~~~ghGisiGS 203 (336)
T 1nhc_A 182 SGESISFTGGTCSGGHGLSIGS 203 (336)
T ss_dssp SEEEEEEESCEEESSSEEEEEE
T ss_pred CCeEEEEEeEEEECCcCceEcc
Confidence 44 4566777777654444443
No 23
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=95.46 E-value=0.16 Score=45.97 Aligned_cols=80 Identities=16% Similarity=0.223 Sum_probs=45.8
Q ss_pred cEEEEE-e--cCceEEEceEEeecCCCCC----------------CCc-------------ccceeeeeee-CCcEEEEe
Q 039887 155 SATVAV-D--ANYFVAINMKFENTAPHVV----------------GSM-------------GEQAVALRIS-GTKAAFYN 201 (241)
Q Consensus 155 sat~~V-~--a~~f~~~nitf~Nta~~~~----------------~~~-------------~~QAvAlrv~-gd~~~f~n 201 (241)
...|.+ . .+++.+++|+|+|+..... ... ..-.-++.+. ++++.+.|
T Consensus 102 P~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n 181 (349)
T 1hg8_A 102 PDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDN 181 (349)
T ss_dssp CSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEE
T ss_pred CeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEe
Confidence 335666 5 4589999999999843210 000 0112235553 46677788
Q ss_pred eEEEeeceeEeeCCC-cEEEeccEEEccceeEec
Q 039887 202 CSFYGAQDTLYDHKG-LHYFNNCFIQGSVDFIFG 234 (241)
Q Consensus 202 C~f~g~QDTL~~~~g-r~~~~~C~I~G~vDfIfG 234 (241)
|.+...-|.+....+ .-.+++|++.+.-.+-+|
T Consensus 182 ~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiG 215 (349)
T 1hg8_A 182 NHVYNQDDCVAVTSGTNIVVSNMYCSGGHGLSIG 215 (349)
T ss_dssp EEEECSSCSEEESSEEEEEEEEEEEESSCCEEEE
T ss_pred eEEecCCCeEEeeCCeEEEEEeEEEeCCcceEEc
Confidence 887765666666554 355677777654344333
No 24
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=95.43 E-value=0.16 Score=49.32 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=47.1
Q ss_pred EEEEe-cCceEEEceEEeecCCCCC----------------CCcccceeeeeee-CCcEEEEeeEEEeeceeEeeCCC--
Q 039887 157 TVAVD-ANYFVAINMKFENTAPHVV----------------GSMGEQAVALRIS-GTKAAFYNCSFYGAQDTLYDHKG-- 216 (241)
Q Consensus 157 t~~V~-a~~f~~~nitf~Nta~~~~----------------~~~~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~~~g-- 216 (241)
.|.+. .+++.++||+|+|+..... +....-.-++.+. ++++.+.||.|..--|.+..+.|
T Consensus 333 ~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~ 412 (608)
T 2uvf_A 333 LMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTG 412 (608)
T ss_dssp SEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCS
T ss_pred EEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcC
Confidence 34444 5789999999999853211 0000112245564 46788888888765556655433
Q ss_pred ----------cEEEeccEEEccceeE-ecC
Q 039887 217 ----------LHYFNNCFIQGSVDFI-FGY 235 (241)
Q Consensus 217 ----------r~~~~~C~I~G~vDfI-fG~ 235 (241)
.-.+++|++.+.-+.+ +|.
T Consensus 413 ~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS 442 (608)
T 2uvf_A 413 EKAQEQEPMKGAWLFNNYFRMGHGAIVTGS 442 (608)
T ss_dssp GGGGGSCCEEEEEEESCEECSSSCSEEEES
T ss_pred ccccccccccCEEEEeEEEeCCCCeEEEcc
Confidence 3567777777655543 554
No 25
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=95.35 E-value=0.04 Score=49.70 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=48.6
Q ss_pred EEEE-ecCceEEEceEEeecCCCCCC----------------Cc-----ccceeeeeee-CCcEEEEeeEEEeeceeEee
Q 039887 157 TVAV-DANYFVAINMKFENTAPHVVG----------------SM-----GEQAVALRIS-GTKAAFYNCSFYGAQDTLYD 213 (241)
Q Consensus 157 t~~V-~a~~f~~~nitf~Nta~~~~~----------------~~-----~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~ 213 (241)
.|.+ ..+++.+++|+|+|+...... .. ..-.-++.+. .+++.+.||.|..--|.+..
T Consensus 102 ~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciai 181 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAI 181 (339)
T ss_dssp CEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEE
Confidence 4444 468899999999998532110 00 1112345553 46788888888765667776
Q ss_pred CCC-cEEEeccEEEccceeEecC
Q 039887 214 HKG-LHYFNNCFIQGSVDFIFGY 235 (241)
Q Consensus 214 ~~g-r~~~~~C~I~G~vDfIfG~ 235 (241)
..+ .-.+++|++.+.--+-+|.
T Consensus 182 ksg~nI~i~n~~~~~ghGisiGS 204 (339)
T 2iq7_A 182 NSGTNITFTGGTCSGGHGLSIGS 204 (339)
T ss_dssp SSEEEEEEESCEEESSCCEEEEE
T ss_pred cCCccEEEEeEEEECCceEEECc
Confidence 654 4667888887654444443
No 26
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=95.25 E-value=0.13 Score=46.51 Aligned_cols=93 Identities=17% Similarity=0.195 Sum_probs=57.3
Q ss_pred chHHHHHHhCCCCCCceEEEEEcCceEee---------------eEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCC
Q 039887 83 KTIREAINSIPPYNTRRVILEIKPGVYRE---------------KVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDG 147 (241)
Q Consensus 83 ~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E---------------~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G 147 (241)
..+++||+..+. +.|.+|.+ .|++.- .+.|.- .+|+||+|... + |.+
T Consensus 24 ~~L~~al~~~~~--~~p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v-~sn~TI~G~~a--~-i~g----------- 85 (330)
T 2qy1_A 24 EAMQSAIDSYSG--SGGLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKN-KSDVTIKGANG--S-AAN----------- 85 (330)
T ss_dssp HHHHHHHHHSCS--SSCEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEES-CCSEEEEECTT--C-BBS-----------
T ss_pred HHHHHHHhccCC--CCCEEEEE-ccEEecccccccccccccccceeEEEc-CCCeEEECCCc--E-Eee-----------
Confidence 368899987553 34556666 677652 123322 35778877542 1 211
Q ss_pred CCCCccCcEEEEEe--cCceEEEceEEeecCCCCCCCcccceeeeee----eCCcEEEEeeEEE
Q 039887 148 KPLKTFQSATVAVD--ANYFVAINMKFENTAPHVVGSMGEQAVALRI----SGTKAAFYNCSFY 205 (241)
Q Consensus 148 ~~~~t~~sat~~V~--a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv----~gd~~~f~nC~f~ 205 (241)
.-|.+. +++++++||+|++..+. .+..++-+.- .++++-+.+|.|.
T Consensus 86 --------~gl~i~~~~~NVIIrnl~i~~~~~~----~~~DaI~i~g~~~~~s~nVWIDH~s~s 137 (330)
T 2qy1_A 86 --------FGIRVVGNAHNVIIQNMTIGLLQGG----EDADSISLEGNSSGEPSKIWVDHNTVF 137 (330)
T ss_dssp --------SEEEEESSCEEEEEESCEEESCSSG----GGCCSEEEECBTTBCCEEEEEESCEEE
T ss_pred --------eeEEEeCCCCeEEEeCeEEeCCCCC----CCCcceeeccccCcccccEEEEeEEEE
Confidence 235665 68999999999976431 1234444443 3788999999996
No 27
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=95.12 E-value=0.13 Score=46.40 Aligned_cols=93 Identities=11% Similarity=0.269 Sum_probs=58.7
Q ss_pred hHHHHHHh---CCCCCCceEEEEEcCceEe------eeEEecC------CCCcEEEecCCCCCcEEEeccCCCCCCCCCC
Q 039887 84 TIREAINS---IPPYNTRRVILEIKPGVYR------EKVSIPK------PLPFVTFLGNSSDPPTITGNDTASATGSDGK 148 (241)
Q Consensus 84 TIq~Ai~a---ap~~~~~r~vI~I~~G~Y~------E~V~I~k------~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~ 148 (241)
-+++||.+ ... .+.|.+|.| .|+-+ +.|.|.. ..+|+||.|.|.+ ..|.+.
T Consensus 30 dL~~Al~~~~~~~~-~~~p~iI~V-~G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~-~~i~G~----------- 95 (326)
T 3vmv_A 30 QIQQLIDNRSRSNN-PDEPLTIYV-NGTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTN-GEFDGI----------- 95 (326)
T ss_dssp HHHHHHHHHHHSSC-TTSCEEEEE-CSEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTC-CEEESC-----------
T ss_pred HHHHHHhhcccccC-CCCCEEEEE-eeEEecCCCCCceEEEecccccccCCCCeEEEecCCC-eEEeCc-----------
Confidence 48888873 211 234556765 46654 4677751 1258999998764 334431
Q ss_pred CCCccCcEEEEE-ecCceEEEceEEeecCCCCCCCcccceeeeeee--CCcEEEEeeEEE
Q 039887 149 PLKTFQSATVAV-DANYFVAINMKFENTAPHVVGSMGEQAVALRIS--GTKAAFYNCSFY 205 (241)
Q Consensus 149 ~~~t~~sat~~V-~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~--gd~~~f~nC~f~ 205 (241)
-|.+ .+++++++||+|++.... +.. ||.+. ++++-+.+|.|.
T Consensus 96 --------gl~i~~a~NVIIrNl~i~~~~~~-----~~D--aI~i~~~s~nVWIDH~s~s 140 (326)
T 3vmv_A 96 --------GIRLSNAHNIIIQNVSIHHVREG-----EGT--AIEVTDDSKNVWIDHNEFY 140 (326)
T ss_dssp --------CEEEESEEEEEEESCEEECCCST-----TSC--SEEEETTCEEEEEESCEEE
T ss_pred --------EEEEEecceEEEECeEEEcCCCC-----CCC--eEEEecCCCcEEEEeeEEe
Confidence 1344 679999999999987532 133 44444 578899999986
No 28
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=94.33 E-value=0.16 Score=45.67 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=48.7
Q ss_pred EEEE-ecCceEEEceEEeecCCCCC----------------CCc-----ccceeeeeee-CCcEEEEeeEEEeeceeEee
Q 039887 157 TVAV-DANYFVAINMKFENTAPHVV----------------GSM-----GEQAVALRIS-GTKAAFYNCSFYGAQDTLYD 213 (241)
Q Consensus 157 t~~V-~a~~f~~~nitf~Nta~~~~----------------~~~-----~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~ 213 (241)
.|.+ ..+++.++||+|+|+..... ... ..-.-++.+. ++++.+.||.|...-|.+..
T Consensus 106 ~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIai 185 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAV 185 (339)
T ss_dssp CEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEE
Confidence 4444 46789999999999843211 000 1123345654 46788888888766677776
Q ss_pred CCC-cEEEeccEEEccceeEecC
Q 039887 214 HKG-LHYFNNCFIQGSVDFIFGY 235 (241)
Q Consensus 214 ~~g-r~~~~~C~I~G~vDfIfG~ 235 (241)
..+ .-.+++|++.+.--+-+|.
T Consensus 186 ksg~nI~i~n~~~~~ghGisiGS 208 (339)
T 1ia5_A 186 NSGENIYFSGGYCSGGHGLSIGS 208 (339)
T ss_dssp SSEEEEEEESCEEESSSCEEEEE
T ss_pred eCCeEEEEEeEEEECCceEEECc
Confidence 654 4667888887654444443
No 29
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=94.28 E-value=0.49 Score=43.26 Aligned_cols=94 Identities=14% Similarity=0.225 Sum_probs=57.9
Q ss_pred HHHHHHhCCCCCCceEEEEEcCceEe----------------eeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCCC
Q 039887 85 IREAINSIPPYNTRRVILEIKPGVYR----------------EKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDGK 148 (241)
Q Consensus 85 Iq~Ai~aap~~~~~r~vI~I~~G~Y~----------------E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~ 148 (241)
+.+||. ..+.|.+|.| .|+.. .+|.|. +|+||.|.|.+.+ |.+
T Consensus 44 L~~al~----~~~~p~vI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v~---snkTI~G~G~~~~-i~g------------ 102 (361)
T 1pe9_A 44 FTSALS----AGAEAKIIQI-KGTIDISGGTPYTDFADQKARSQINIP---ANTTVIGLGTDAK-FIN------------ 102 (361)
T ss_dssp HHHHHT----TTTSCEEEEE-CSEEETTTTCCCCSHHHHHHHSEEECC---SSEEEEECTTCCE-EES------------
T ss_pred HHHHHh----cCCCcEEEEE-CCEEecCCccccccccccccceeEEec---CCcEEEccCCCeE-Eec------------
Confidence 555553 2344567776 57765 145553 5899999976443 443
Q ss_pred CCCccCcEEEEE----ecCceEEEceEEeecCCCCC---CC--cccceeeeeee--CCcEEEEeeEEEe
Q 039887 149 PLKTFQSATVAV----DANYFVAINMKFENTAPHVV---GS--MGEQAVALRIS--GTKAAFYNCSFYG 206 (241)
Q Consensus 149 ~~~t~~sat~~V----~a~~f~~~nitf~Nta~~~~---~~--~~~QAvAlrv~--gd~~~f~nC~f~g 206 (241)
.-|.+ .+++++++||+|++...... +. .+...-||.+. +.++-+.+|.|..
T Consensus 103 -------~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~ 164 (361)
T 1pe9_A 103 -------GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISD 164 (361)
T ss_dssp -------SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEEC
T ss_pred -------CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeec
Confidence 23566 46899999999998642110 00 01223466664 4789999999974
No 30
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=93.55 E-value=0.19 Score=45.12 Aligned_cols=60 Identities=17% Similarity=0.318 Sum_probs=47.6
Q ss_pred EEEEEecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeeceeEeeCCCcEEEeccEEEc
Q 039887 156 ATVAVDANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQG 227 (241)
Q Consensus 156 at~~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~G 227 (241)
..|.+.++...++|..|... |. .|.+++.+..|++|.|.|.-|-+|. .+..+|.+|.|.-
T Consensus 115 vAl~v~~d~~~f~~c~f~g~----------QD-TLy~~~~r~~~~~c~I~G~vDFIfG-~~~a~f~~c~i~~ 174 (319)
T 1gq8_A 115 VALRVGSDLSAFYRCDILAY----------QD-SLYVHSNRQFFINCFIAGTVDFIFG-NAAVVLQDCDIHA 174 (319)
T ss_dssp CSEEECCTTEEEEEEEEECS----------TT-CEEECSSEEEEESCEEEESSSCEEE-SCEEEEESCEEEE
T ss_pred EEEEecCCcEEEEEeEECcc----------ce-eeeecCccEEEEecEEEeeeeEEec-CCcEEEEeeEEEE
Confidence 45678899999999998643 32 4666667789999999999999986 4788999998864
No 31
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=93.53 E-value=0.71 Score=42.73 Aligned_cols=67 Identities=19% Similarity=0.388 Sum_probs=43.2
Q ss_pred CcEEEecCCCCCcEEEeccCCCCCCCCCCCCCccCcEEEEEecCceEEEceEEeecCCCC------CCC---cccceeee
Q 039887 120 PFVTFLGNSSDPPTITGNDTASATGSDGKPLKTFQSATVAVDANYFVAINMKFENTAPHV------VGS---MGEQAVAL 190 (241)
Q Consensus 120 ~~ItL~G~g~~~tiIt~~~~~~~~~~~G~~~~t~~sat~~V~a~~f~~~nitf~Nta~~~------~~~---~~~QAvAl 190 (241)
+|+||.|.|.+. .|.+ ..|.+..++++++||+|++..... .+. .+...-||
T Consensus 127 snkTI~G~G~~~-~i~g-------------------~gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI 186 (399)
T 2o04_A 127 ANTTIVGSGTNA-KVVG-------------------GNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNI 186 (399)
T ss_dssp SSEEEEESSSCC-EEES-------------------CEEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSE
T ss_pred CCceEEeccCCe-EEee-------------------CEEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeE
Confidence 689999997643 3443 246677789999999999864210 000 01223455
Q ss_pred ee-eCCcEEEEeeEEEe
Q 039887 191 RI-SGTKAAFYNCSFYG 206 (241)
Q Consensus 191 rv-~gd~~~f~nC~f~g 206 (241)
.+ .+.++-+.+|.|.-
T Consensus 187 ~i~~s~nVWIDHcs~s~ 203 (399)
T 2o04_A 187 TINGGTHIWIDHCTFND 203 (399)
T ss_dssp EEESCEEEEEESCEEEC
T ss_pred EecCCCcEEEEeeeeec
Confidence 55 46779999999873
No 32
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=93.43 E-value=0.97 Score=42.05 Aligned_cols=67 Identities=13% Similarity=0.245 Sum_probs=42.4
Q ss_pred CcEEEecCCCCCcEEEeccCCCCCCCCCCCCCccCcEEEEE-ecCceEEEceEEeecCCCC-----CCC----cccceee
Q 039887 120 PFVTFLGNSSDPPTITGNDTASATGSDGKPLKTFQSATVAV-DANYFVAINMKFENTAPHV-----VGS----MGEQAVA 189 (241)
Q Consensus 120 ~~ItL~G~g~~~tiIt~~~~~~~~~~~G~~~~t~~sat~~V-~a~~f~~~nitf~Nta~~~-----~~~----~~~QAvA 189 (241)
+|+||.|.|.+. .|.+ .-|.+ .+++++++||+|++..... ..+ .....-|
T Consensus 132 snkTI~G~G~~~-~i~g-------------------~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~Da 191 (416)
T 1vbl_A 132 SNTSIIGVGKDA-KIKG-------------------GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDS 191 (416)
T ss_dssp SSEEEEECTTCC-EEES-------------------CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCS
T ss_pred CCeeEEecCCCe-EEec-------------------CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCce
Confidence 589999997643 3443 12455 4689999999999864210 000 0122345
Q ss_pred eee-eCCcEEEEeeEEEe
Q 039887 190 LRI-SGTKAAFYNCSFYG 206 (241)
Q Consensus 190 lrv-~gd~~~f~nC~f~g 206 (241)
|.+ .+.++-+.+|.|..
T Consensus 192 I~i~~s~nVWIDHcs~s~ 209 (416)
T 1vbl_A 192 ISIEGSSHIWIDHNTFTD 209 (416)
T ss_dssp EEEESCEEEEEESCEEEC
T ss_pred EEecCCceEEEEccEEec
Confidence 665 46789999999973
No 33
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=93.20 E-value=0.23 Score=44.63 Aligned_cols=60 Identities=15% Similarity=0.277 Sum_probs=47.1
Q ss_pred EEEEEecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeeceeEeeCCCcEEEeccEEEc
Q 039887 156 ATVAVDANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQG 227 (241)
Q Consensus 156 at~~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~G 227 (241)
..|.+.++...++|..|... |. .|.+++.+.-|++|.|.|.-|-+|. .+..+|.+|.|.-
T Consensus 111 vAl~v~~d~~~f~~c~f~g~----------QD-TLy~~~~r~~~~~c~I~G~vDFIfG-~~~avf~~c~i~~ 170 (317)
T 1xg2_A 111 VALRVGADMSVINRCRIDAY----------QD-TLYAHSQRQFYRDSYVTGTVDFIFG-NAAVVFQKCQLVA 170 (317)
T ss_dssp CSEEECCTTEEEESCEEECS----------TT-CEEECSSEEEEESCEEEESSSCEEE-CCEEEEESCEEEE
T ss_pred EEEEEeCCcEEEEEeEeCcc----------cc-ceeecCccEEEEeeEEEeceeEEcC-CceEEEeeeEEEE
Confidence 45678899999999998643 32 4666667788999999999999886 4788899998863
No 34
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=93.15 E-value=0.5 Score=42.95 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=36.8
Q ss_pred ecCceEEEceEEeecCCCCC---------------CC-c----ccceeeeeee-CCcEEEEeeEEEeeceeEeeCCC-cE
Q 039887 161 DANYFVAINMKFENTAPHVV---------------GS-M----GEQAVALRIS-GTKAAFYNCSFYGAQDTLYDHKG-LH 218 (241)
Q Consensus 161 ~a~~f~~~nitf~Nta~~~~---------------~~-~----~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~~~g-r~ 218 (241)
..+++.++||+++|+..... .. . .+-.-++.+. .+++.+.||.|..--|.+....+ .-
T Consensus 133 ~~~nv~i~~iti~nsp~~~i~i~~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI 212 (362)
T 1czf_A 133 GLDSSSITGLNIKNTPLMAFSVQANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENI 212 (362)
T ss_dssp EEETEEEESCEEECCSSCCEEEECSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSEEEE
T ss_pred ecccEEEEEEEEecCCccEEEEeeCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCCeEE
Confidence 35678888888888732100 00 0 1122334553 35677777777655566665543 45
Q ss_pred EEeccEEEc
Q 039887 219 YFNNCFIQG 227 (241)
Q Consensus 219 ~~~~C~I~G 227 (241)
.+++|++.+
T Consensus 213 ~i~n~~~~~ 221 (362)
T 1czf_A 213 WFTGGTCIG 221 (362)
T ss_dssp EEESCEEES
T ss_pred EEEEEEEeC
Confidence 567776665
No 35
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=93.03 E-value=0.16 Score=46.15 Aligned_cols=56 Identities=25% Similarity=0.459 Sum_probs=47.0
Q ss_pred EEecCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeeceeEeeCCCcEEEeccEEE
Q 039887 159 AVDANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQ 226 (241)
Q Consensus 159 ~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~ 226 (241)
.+.++...++|..|... |. .|.+.+.+.-|++|.|+|.=|-+|. .++.+|.+|.|.
T Consensus 136 ~v~~d~~~f~~c~f~G~----------QD-TLy~~~gr~~~~~c~I~G~vDFIFG-~a~a~f~~c~i~ 191 (342)
T 2nsp_A 136 TKSGDRAYFKDVSLVGY----------QA-TLYVSGGRSFFSDCRISGTVDFIFG-DGTALFNNCDLV 191 (342)
T ss_dssp CTTCBSEEEEEEEEECS----------TT-CEEECSSEEEEESCEEEESEEEEEE-SSEEEEESCEEE
T ss_pred eeccCcEEEEeeEEecc----------cc-eEEECCCCEEEEcCEEEeceEEEeC-CceEEEecCEEE
Confidence 56789999999988643 43 4777788999999999999999997 588999999996
No 36
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=92.02 E-value=1.1 Score=41.96 Aligned_cols=69 Identities=12% Similarity=0.155 Sum_probs=42.8
Q ss_pred EEEEe-cCceEEEceEEeecCCCCCCC---------------cccceeeeeee-CCcEEEEeeEEEeeceeEeeCCC---
Q 039887 157 TVAVD-ANYFVAINMKFENTAPHVVGS---------------MGEQAVALRIS-GTKAAFYNCSFYGAQDTLYDHKG--- 216 (241)
Q Consensus 157 t~~V~-a~~f~~~nitf~Nta~~~~~~---------------~~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~~~g--- 216 (241)
.+.+. .+++.+++|+++|+....... .....-++.+. +.++.+.||.|...-|.+...+|
T Consensus 192 ~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~~~ 271 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDA 271 (448)
T ss_dssp SEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCCHH
T ss_pred EEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEeccCccc
Confidence 44444 688999999999986532100 00112234443 46788899998876666666555
Q ss_pred ----------cEEEeccEE
Q 039887 217 ----------LHYFNNCFI 225 (241)
Q Consensus 217 ----------r~~~~~C~I 225 (241)
.-.+++|++
T Consensus 272 dg~~~~~ps~nI~I~n~~~ 290 (448)
T 3jur_A 272 DGRRIGVPSEYILVRDNLV 290 (448)
T ss_dssp HHHHHCCCEEEEEEESCEE
T ss_pred cccccCCCceeEEEEEeEE
Confidence 356678887
No 37
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=90.70 E-value=1.8 Score=43.23 Aligned_cols=102 Identities=15% Similarity=0.255 Sum_probs=65.7
Q ss_pred CCchHHHHHHhCCCCCCceEEEEEcCceEe--eeEEecCCCCcEEEecCCCCCcEEEeccC-CCCCCCCCCCCCccCcEE
Q 039887 81 DFKTIREAINSIPPYNTRRVILEIKPGVYR--EKVSIPKPLPFVTFLGNSSDPPTITGNDT-ASATGSDGKPLKTFQSAT 157 (241)
Q Consensus 81 ~f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~--E~V~I~k~k~~ItL~G~g~~~tiIt~~~~-~~~~~~~G~~~~t~~sat 157 (241)
|=..||+|++++..+. +|++.+|+|+ ..|.|+. ++.|+|++- ++|.+... +.+. ......
T Consensus 416 DT~Ai~~al~aa~~g~----~v~~P~G~Y~vt~Ti~ip~---~~~ivG~~~--~~I~~~G~~F~d~--------~~P~pv 478 (758)
T 3eqn_A 416 DTQAIKNVFAKYAGCK----IIFFDAGTYIVTDTIQIPA---GTQIVGEVW--SVIMGTGSKFTDY--------NNPQPV 478 (758)
T ss_dssp CHHHHHHHHHHHTTTS----EEECCSEEEEESSCEEECT---TCEEECCSS--EEEEECSGGGCCT--------TSCEEE
T ss_pred hHHHHHHHHHHhcCCC----EEEECCCEeEECCeEEcCC---CCEEEeccc--ceEecCCccccCC--------CCCeee
Confidence 4678999999775543 8999999999 5799974 699999986 56666432 2211 112456
Q ss_pred EEEe----cCceEEEceEEeecCCCCCCCcccceeeeeee-------CCcEEEEeeEEE
Q 039887 158 VAVD----ANYFVAINMKFENTAPHVVGSMGEQAVALRIS-------GTKAAFYNCSFY 205 (241)
Q Consensus 158 ~~V~----a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~-------gd~~~f~nC~f~ 205 (241)
+.|. ...+.+.+|.|.= .++.. -|+.|... ...+.+.+++|.
T Consensus 479 v~VG~~gd~G~veisdl~~~t-~g~~~-----gail~ewn~~~~~~~~~~~~mwDvh~R 531 (758)
T 3eqn_A 479 IQVGAPGSSGVVEITDMIFTT-RGPAA-----GAIIVEWNVHDPSGQQAAAGAWDTHLI 531 (758)
T ss_dssp EEESCTTCBSCEEEESCEEEE-CSCCT-----TEEEEEECCBCCTTCTTCEEEESCBEE
T ss_pred EEeCCCCCCCeEEEEeEEEEe-cCCCC-----CcEEEEEcCCCCCCCCCCeeEEEEEEE
Confidence 7773 2478999999853 33221 24444432 134666666666
No 38
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=90.19 E-value=1.4 Score=42.93 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=29.3
Q ss_pred CCchHHHHHHhCCCCCCceEEEEEcCc-eEee-------------eEEecCCCCcEEEecCC
Q 039887 81 DFKTIREAINSIPPYNTRRVILEIKPG-VYRE-------------KVSIPKPLPFVTFLGNS 128 (241)
Q Consensus 81 ~f~TIq~Ai~aap~~~~~r~vI~I~~G-~Y~E-------------~V~I~k~k~~ItL~G~g 128 (241)
+=.-||+|++++... +.-+|+|.+| +|.- .|.++ .+++|.-+|
T Consensus 63 dT~AIqkAIdaCs~~--GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk---SnVtL~LdG 119 (600)
T 2x6w_A 63 SRQYLQAAIDYVSSN--GGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR---SNVNLNIEG 119 (600)
T ss_dssp CHHHHHHHHHHHHHT--TCEEEEECTTCEEEECSCCCGGGGGGTEEEECC---TTEEEEECS
T ss_pred CHHHHHHHHHHhhhc--CCCEEEECCCCEEEecccccccccccccceEEc---CceEEeeec
Confidence 335699999987642 1238899999 9976 34442 467777666
No 39
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=87.23 E-value=1.5 Score=40.04 Aligned_cols=59 Identities=24% Similarity=0.464 Sum_probs=46.0
Q ss_pred EEEEE--ecCceEEEceEEeecCCCCCCCcccceeeeeee-CCcEEEEeeEEEeeceeEeeCCCcEEEeccEEE
Q 039887 156 ATVAV--DANYFVAINMKFENTAPHVVGSMGEQAVALRIS-GTKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQ 226 (241)
Q Consensus 156 at~~V--~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~-gd~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~ 226 (241)
..|.| .++...++|..|... | -.|.+. ..+.-|++|.|+|-=|=+|. .+..+|.+|.|.
T Consensus 157 vAl~v~~~~D~~~f~~C~f~G~----------Q-DTLy~~~~gr~yf~~c~I~GtvDFIFG-~a~a~f~~c~i~ 218 (364)
T 3uw0_A 157 VALLLAENSDKARFKAVKLEGY----------Q-DTLYSKTGSRSYFSDCEISGHVDFIFG-SGITVFDNCNIV 218 (364)
T ss_dssp CSEEECTTCEEEEEEEEEEECS----------B-SCEEECTTCEEEEESCEEEESEEEEEE-SSEEEEESCEEE
T ss_pred EEEEEecCCCeEEEEeeEEEec----------c-cceEeCCCCCEEEEcCEEEcCCCEECC-cceEEEEeeEEE
Confidence 34556 478888899888643 4 356666 78899999999999999997 588999999986
No 40
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=81.70 E-value=5.5 Score=37.13 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=47.5
Q ss_pred EEEEEecCceEEEceEEeecCCCCC-CCcccceeeeeeeCCcEEEEeeEEEeeceeEeeCCCcEEEeccEEE
Q 039887 156 ATVAVDANYFVAINMKFENTAPHVV-GSMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQ 226 (241)
Q Consensus 156 at~~V~a~~f~~~nitf~Nta~~~~-~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~ 226 (241)
-.|.+.+|...+++..|.-.-.... +..+.|-.--.-...+.-|++|.|+|-=|=+|. .+..+|.+|.|.
T Consensus 226 VAL~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG-~a~AvFe~C~I~ 296 (422)
T 3grh_A 226 VALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSG-RGAVVFDNTEFR 296 (422)
T ss_dssp CSEEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEE-SSEEEEESCEEE
T ss_pred EEEEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEeccccEEcc-CceEEEEeeEEE
Confidence 3578899999999999974432211 000001000001356889999999999999997 689999999997
No 41
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=75.49 E-value=11 Score=36.23 Aligned_cols=32 Identities=6% Similarity=-0.099 Sum_probs=21.2
Q ss_pred CcEEEEeeEEEeeceeEeeCCCcEEEeccEEE
Q 039887 195 TKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQ 226 (241)
Q Consensus 195 d~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~ 226 (241)
.++.+.||.|...-|.+...+-.-.+++|++.
T Consensus 382 ~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i~ 413 (574)
T 1ogo_X 382 PNSVVHDVFWHVNDDAIKIYYSGASVSRATIW 413 (574)
T ss_dssp TTCEEEEEEEEESSCSEECCSTTCEEEEEEEE
T ss_pred CCEEEEeeEEECCCCEEEECCccEEEEeEEEE
Confidence 66778888887766666555445566666655
No 42
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=70.97 E-value=0.018 Score=54.08 Aligned_cols=90 Identities=16% Similarity=0.024 Sum_probs=59.8
Q ss_pred EcCCCCCCCchHHHHHHhCCCCCCceE------EEEEcCceEeeeEEecCCCCcEEEecCC---CCCcEEEeccCCCCCC
Q 039887 74 VCQNGTGDFKTIREAINSIPPYNTRRV------ILEIKPGVYREKVSIPKPLPFVTFLGNS---SDPPTITGNDTASATG 144 (241)
Q Consensus 74 V~~dGsg~f~TIq~Ai~aap~~~~~r~------vI~I~~G~Y~E~V~I~k~k~~ItL~G~g---~~~tiIt~~~~~~~~~ 144 (241)
|+-+..|++ +|+|.+.++-..+.+. .+-|++|+|+|++.|+.++|++++.|-+ ...+.|+++..+.+
T Consensus 296 ~~~~~~g~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 371 (432)
T 1vcl_A 296 VGCDQNGKV--SQQISNTISFSSTVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCDNYD-- 371 (432)
T ss_dssp EEEETTSCC--EEEECCEEECSSCCCHHHHHHHHHHHHHCCEETTEECCHHHHHHHHHHHHTTCSCCCCEEEECCBCT--
T ss_pred cccCCCCcE--EEeccceEEEeccccccEEEEEEEeeccceEEEEEEeecccchhhhhhhccCCCCcEEEEEecCCCc--
Confidence 333444555 4666666554333332 6789999999999999999999998843 23488999876554
Q ss_pred CCCCCCCccCcEEEEEecCceEEEceEEeecCC
Q 039887 145 SDGKPLKTFQSATVAVDANYFVAINMKFENTAP 177 (241)
Q Consensus 145 ~~G~~~~t~~sat~~V~a~~f~~~nitf~Nta~ 177 (241)
|+.+-+++-.|.+++-|=+-.++
T Consensus 372 ----------~~~~~~~~~~~~~~~~~~~~~~~ 394 (432)
T 1vcl_A 372 ----------SDEEFTRGCMWQLAIETTEVKSG 394 (432)
T ss_dssp ----------TSSBCSSEEEEEEEEEEEETTTT
T ss_pred ----------ccChhhccceEEEeeeeeecccC
Confidence 34455566667777666554443
No 43
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=64.07 E-value=21 Score=32.15 Aligned_cols=67 Identities=15% Similarity=0.143 Sum_probs=41.8
Q ss_pred cCceEEEceEEeecCC-----C-CCC----------------CcccceeeeeeeCCcEEEEeeEEEeeceeEeeCC----
Q 039887 162 ANYFVAINMKFENTAP-----H-VVG----------------SMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHK---- 215 (241)
Q Consensus 162 a~~f~~~nitf~Nta~-----~-~~~----------------~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~---- 215 (241)
.++++++|++|.+..+ + ..| ..+...+++.. +.++.|.||.+.+-- .+-..+
T Consensus 156 ~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~gh-GisiGS~G~~ 233 (362)
T 1czf_A 156 ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGH-GLSIGSVGDR 233 (362)
T ss_dssp CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSC-CEEEEEECSS
T ss_pred eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCc-eeEEeecccc
Confidence 8889999999998642 1 111 01223445543 478999999998642 233211
Q ss_pred -----CcEEEeccEEEccce
Q 039887 216 -----GLHYFNNCFIQGSVD 230 (241)
Q Consensus 216 -----gr~~~~~C~I~G~vD 230 (241)
-.-+++||.+.++-.
T Consensus 234 ~~~~v~nV~v~n~~~~~t~~ 253 (362)
T 1czf_A 234 SNNVVKNVTIEHSTVSNSEN 253 (362)
T ss_dssp SCCEEEEEEEEEEEEEEEEE
T ss_pred CCCCEEEEEEEeeEEECCce
Confidence 245788999888643
No 44
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=63.32 E-value=26 Score=33.50 Aligned_cols=34 Identities=9% Similarity=-0.073 Sum_probs=26.7
Q ss_pred CcEEEEeeEEEeeceeEeeCCCcEEEeccEEEcc
Q 039887 195 TKAAFYNCSFYGAQDTLYDHKGLHYFNNCFIQGS 228 (241)
Q Consensus 195 d~~~f~nC~f~g~QDTL~~~~gr~~~~~C~I~G~ 228 (241)
+++.+.||.|...=|.+...+-.-.++||++.+.
T Consensus 344 ~nV~I~n~~i~~gDDcIaIks~NI~I~n~~~~~~ 377 (549)
T 1x0c_A 344 PGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKE 377 (549)
T ss_dssp TTCEEEEEEEEESSCCEECCSSSEEEEEEEEEEC
T ss_pred CCEEEEeeEEeCCCCEEEECCCCEEEEeeEEEcC
Confidence 7788999999887777766666778889988753
No 45
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=62.64 E-value=35 Score=31.20 Aligned_cols=19 Identities=0% Similarity=-0.059 Sum_probs=10.0
Q ss_pred CcEEEEeeEEEeeceeEee
Q 039887 195 TKAAFYNCSFYGAQDTLYD 213 (241)
Q Consensus 195 d~~~f~nC~f~g~QDTL~~ 213 (241)
.++.+.||.|...-|.+..
T Consensus 184 ~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 184 SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEESSSEEEEE
T ss_pred CeEEEEeeEEeCCCCeEEe
Confidence 4555666666544444443
No 46
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=60.81 E-value=39 Score=29.86 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=36.6
Q ss_pred cCceEEEceEEeecCCCCCCCcccceeeeeeeCCcEEEEeeEEEeeceeEeeCC---------CcEEEeccEEEccc
Q 039887 162 ANYFVAINMKFENTAPHVVGSMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHK---------GLHYFNNCFIQGSV 229 (241)
Q Consensus 162 a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~---------gr~~~~~C~I~G~v 229 (241)
++++.++|.+|.|. ...+|+.. +.++.+.||.+.+--. +-..+ -.-+++||.+.++-
T Consensus 162 s~nV~I~n~~i~~g---------DDciaiks-g~nI~i~n~~~~~ghG-isiGSlg~~~~~~v~nV~v~n~~~~~~~ 227 (339)
T 2iq7_A 162 STGVYISGANVKNQ---------DDCLAINS-GTNITFTGGTCSGGHG-LSIGSVGGRSDNTVKTVTISNSKIVNSD 227 (339)
T ss_dssp CEEEEEESCEEECS---------SCSEEESS-EEEEEEESCEEESSCC-EEEEEESSSSCCEEEEEEEEEEEEESCS
T ss_pred cceEEEEecEEecC---------CCEEEEcC-CccEEEEeEEEECCce-EEECcCCcccCCCEEEEEEEeeEEECCC
Confidence 35666666666542 23566654 4789999999986533 43211 24678999998864
No 47
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=60.60 E-value=29 Score=33.38 Aligned_cols=61 Identities=8% Similarity=0.038 Sum_probs=42.9
Q ss_pred ecCceEEEceEEeecCCCCCCCcccceeeeee-eCCcE--EEEeeEEEe---e-ceeEeeCCCcEEEeccEEEccceeE
Q 039887 161 DANYFVAINMKFENTAPHVVGSMGEQAVALRI-SGTKA--AFYNCSFYG---A-QDTLYDHKGLHYFNNCFIQGSVDFI 232 (241)
Q Consensus 161 ~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv-~gd~~--~f~nC~f~g---~-QDTL~~~~gr~~~~~C~I~G~vDfI 232 (241)
...++.++||+++|+... . +.+ ..+++ .+.+|++.+ . -|.+-.. -.-..++|+|.-.=|-|
T Consensus 331 ~c~NV~I~Giti~NSp~w--------~--i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~-~NV~I~nc~I~~gDDcI 398 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPFN--------T--MDFNGNSGISSQISDYKQVGAFFFQTDGPEIY-PNSVVHDVFWHVNDDAI 398 (574)
T ss_dssp SSEEEEEESCEEECCSSC--------S--EEECSSSCEEEEEEEEEEECCCSTTCCCCBCC-TTCEEEEEEEEESSCSE
T ss_pred CceeEEEECeEEECCCCc--------E--EeecCCCChhhEEEeeEeeCCCCCCCccCccc-CCEEEEeeEEECCCCEE
Confidence 578899999999997332 1 223 46778 999998874 2 4555444 56678889988766655
No 48
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=59.27 E-value=28 Score=31.05 Aligned_cols=42 Identities=21% Similarity=0.109 Sum_probs=26.5
Q ss_pred eeeeeeeCCcEEEEeeEEEeeceeEeeC---------CCcEEEeccEEEccce
Q 039887 187 AVALRISGTKAAFYNCSFYGAQDTLYDH---------KGLHYFNNCFIQGSVD 230 (241)
Q Consensus 187 AvAlrv~gd~~~f~nC~f~g~QDTL~~~---------~gr~~~~~C~I~G~vD 230 (241)
.+|+.. +.++.+.||.+.+-- .+-.. .-.-+++||.+.++-.
T Consensus 190 cIaiks-g~nI~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~ 240 (349)
T 1hg8_A 190 CVAVTS-GTNIVVSNMYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQN 240 (349)
T ss_dssp SEEESS-EEEEEEEEEEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEE
T ss_pred eEEeeC-CeEEEEEeEEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCc
Confidence 344433 467888999998543 24321 1256889999998654
No 49
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=55.31 E-value=22 Score=31.54 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=20.5
Q ss_pred eCCcEEEEeeEEEeeceeEeeCCC-cEEEeccEEEc
Q 039887 193 SGTKAAFYNCSFYGAQDTLYDHKG-LHYFNNCFIQG 227 (241)
Q Consensus 193 ~gd~~~f~nC~f~g~QDTL~~~~g-r~~~~~C~I~G 227 (241)
.++++.+.||.|..--|.+-...| .-.++||++.+
T Consensus 158 ~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ 193 (335)
T 1k5c_A 158 SANNVTIQNCIVKNQDDCIAINDGNNIRFENNQCSG 193 (335)
T ss_dssp ECSSEEEESCEEESSSCSEEEEEEEEEEEESCEEES
T ss_pred cCCeEEEEeeEEEcCCCEEEeeCCeeEEEEEEEEEC
Confidence 556677777777654455544433 35566666665
No 50
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=52.48 E-value=32 Score=30.50 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=41.1
Q ss_pred ecCceEEEceEEeecCCC------CCC----------------CcccceeeeeeeCCcEEEEeeEEEeeceeEeeCC---
Q 039887 161 DANYFVAINMKFENTAPH------VVG----------------SMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHK--- 215 (241)
Q Consensus 161 ~a~~f~~~nitf~Nta~~------~~~----------------~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~--- 215 (241)
.+++++++|++|.+..+. ..+ ..+...+|+.. +.++.+.||.+.+.-. +-..+
T Consensus 134 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghG-isiGS~g~ 211 (339)
T 1ia5_A 134 GSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHG-LSIGSVGG 211 (339)
T ss_dssp SCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSC-EEEEEECS
T ss_pred cccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCce-EEECcCCc
Confidence 357788999999886421 111 01223444443 4789999999986433 32211
Q ss_pred ------CcEEEeccEEEccce
Q 039887 216 ------GLHYFNNCFIQGSVD 230 (241)
Q Consensus 216 ------gr~~~~~C~I~G~vD 230 (241)
-.-+++||.+.++--
T Consensus 212 ~~~~~v~nV~v~n~~~~~t~~ 232 (339)
T 1ia5_A 212 RSDNTVKNVTFVDSTIINSDN 232 (339)
T ss_dssp SSCCEEEEEEEEEEEEESCSE
T ss_pred ccCCCEEEEEEEeeEEECCCc
Confidence 246789999988654
No 51
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=52.10 E-value=24 Score=31.64 Aligned_cols=20 Identities=15% Similarity=0.383 Sum_probs=13.9
Q ss_pred EEEEe-cCceEEEceEEeecC
Q 039887 157 TVAVD-ANYFVAINMKFENTA 176 (241)
Q Consensus 157 t~~V~-a~~f~~~nitf~Nta 176 (241)
.|.+. .+++.++||+|+|+.
T Consensus 153 ~i~~~~~~nv~I~~iti~nsp 173 (376)
T 1bhe_A 153 LIQINKSKNFTLYNVSLINSP 173 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCS
T ss_pred EEEEEcceEEEEEeEEEECCC
Confidence 44444 577888888888864
No 52
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=51.45 E-value=37 Score=29.97 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=41.7
Q ss_pred cCceEEEceEEeecCC-----C-CCC----------------CcccceeeeeeeCCcEEEEeeEEEeeceeEeeCC----
Q 039887 162 ANYFVAINMKFENTAP-----H-VVG----------------SMGEQAVALRISGTKAAFYNCSFYGAQDTLYDHK---- 215 (241)
Q Consensus 162 a~~f~~~nitf~Nta~-----~-~~~----------------~~~~QAvAlrv~gd~~~f~nC~f~g~QDTL~~~~---- 215 (241)
+++++++|++|.+..+ + ..+ ..+...+|+.. +.++.+.||.+.+--. +-..+
T Consensus 130 ~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghG-isiGS~g~~ 207 (336)
T 1nhc_A 130 ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHG-LSIGSVGGR 207 (336)
T ss_dssp EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSE-EEEEEESSS
T ss_pred eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcC-ceEccCccc
Confidence 7789999999988642 1 111 01233455543 4789999999986433 33211
Q ss_pred -----CcEEEeccEEEccce
Q 039887 216 -----GLHYFNNCFIQGSVD 230 (241)
Q Consensus 216 -----gr~~~~~C~I~G~vD 230 (241)
-.-+++||.+.++--
T Consensus 208 ~~~~v~nV~v~n~~~~~t~~ 227 (336)
T 1nhc_A 208 DDNTVKNVTISDSTVSNSAN 227 (336)
T ss_dssp SCCEEEEEEEEEEEEESCSE
T ss_pred cCCCEEEEEEEeeEEECCCc
Confidence 246788999988643
No 53
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=49.69 E-value=1.5e+02 Score=27.35 Aligned_cols=21 Identities=19% Similarity=0.245 Sum_probs=15.9
Q ss_pred EEEEEe--cCceEEEceEEeecC
Q 039887 156 ATVAVD--ANYFVAINMKFENTA 176 (241)
Q Consensus 156 at~~V~--a~~f~~~nitf~Nta 176 (241)
|-+.+. ++.+.++|+.|++..
T Consensus 162 AGI~v~~~~d~~~I~nn~i~~~~ 184 (410)
T 2inu_A 162 TGIEVASDNDSFHITGMGFVYLE 184 (410)
T ss_dssp EEEEECSCEESCEEESCEEESCS
T ss_pred eeEEEeccCCeEEEECCEEeccc
Confidence 445554 688999999998874
No 54
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=47.29 E-value=1.1e+02 Score=26.84 Aligned_cols=61 Identities=11% Similarity=0.126 Sum_probs=42.3
Q ss_pred ecCceEEEceEEeecCCCCCCCcccceeeeee-eCCc-EEEEeeEEEeec----------eeEeeCCCcEEEeccEEEcc
Q 039887 161 DANYFVAINMKFENTAPHVVGSMGEQAVALRI-SGTK-AAFYNCSFYGAQ----------DTLYDHKGLHYFNNCFIQGS 228 (241)
Q Consensus 161 ~a~~f~~~nitf~Nta~~~~~~~~~QAvAlrv-~gd~-~~f~nC~f~g~Q----------DTL~~~~gr~~~~~C~I~G~ 228 (241)
..+ +.++||+++|+... .+.+ ..++ +.+.+|++.... |.+-...-.-..++|+|...
T Consensus 104 ~~~-v~i~giti~nsp~~----------~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi~s~nV~I~n~~i~~g 172 (335)
T 1k5c_A 104 KGS-GTYKKFEVLNSPAQ----------AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVSANNVTIQNCIVKNQ 172 (335)
T ss_dssp EEE-EEEESCEEESCSSC----------CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEEECSSEEEESCEEESS
T ss_pred ceE-EEEEEEEEECCCcc----------eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcccCCeEEEEeeEEEcC
Confidence 345 99999999999542 2444 4567 999999999753 22322345678899999865
Q ss_pred ceeE
Q 039887 229 VDFI 232 (241)
Q Consensus 229 vDfI 232 (241)
=|-|
T Consensus 173 DDcI 176 (335)
T 1k5c_A 173 DDCI 176 (335)
T ss_dssp SCSE
T ss_pred CCEE
Confidence 5544
No 55
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=46.98 E-value=46 Score=31.11 Aligned_cols=60 Identities=12% Similarity=-0.010 Sum_probs=37.0
Q ss_pred EecCceEEEceEEeecCCCCCCCcccceee-eee-eCCcEEEEeeEEEeeceeEeeCCC-------------cEEEeccE
Q 039887 160 VDANYFVAINMKFENTAPHVVGSMGEQAVA-LRI-SGTKAAFYNCSFYGAQDTLYDHKG-------------LHYFNNCF 224 (241)
Q Consensus 160 V~a~~f~~~nitf~Nta~~~~~~~~~QAvA-lrv-~gd~~~f~nC~f~g~QDTL~~~~g-------------r~~~~~C~ 224 (241)
+.++++.++|++|.|... ..+ ... ...++.+.||.|.| .+.|....+ .-.|+||.
T Consensus 172 i~s~nV~I~n~~I~~gdd---------giGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~ 241 (464)
T 1h80_A 172 HWSRNGIIERIKQNNALF---------GYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIR 241 (464)
T ss_dssp EEEEEEEEEEEEEESCCT---------TCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEE
T ss_pred eeccCEEEeceEEecCCC---------eEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEE
Confidence 345666677777766521 123 222 45688999999888 666644333 34788888
Q ss_pred EEccc
Q 039887 225 IQGSV 229 (241)
Q Consensus 225 I~G~v 229 (241)
+++.-
T Consensus 242 ~~nv~ 246 (464)
T 1h80_A 242 CSKGL 246 (464)
T ss_dssp EESSS
T ss_pred EECCc
Confidence 88753
No 56
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=39.69 E-value=22 Score=33.60 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=33.6
Q ss_pred CCchHHHHHHhCCCCCCceEEEEEcCc----eEee--eEEecCCCCcEEEecCCCC
Q 039887 81 DFKTIREAINSIPPYNTRRVILEIKPG----VYRE--KVSIPKPLPFVTFLGNSSD 130 (241)
Q Consensus 81 ~f~TIq~Ai~aap~~~~~r~vI~I~~G----~Y~E--~V~I~k~k~~ItL~G~g~~ 130 (241)
+-.-||+||+++... .+.-+++|.+| +|.= .+.++ .+++|.|++..
T Consensus 67 DTaAIQkAIdaA~a~-~GGGtVyVPaG~~~~tYlvt~tI~Lk---SnV~L~Ge~~A 118 (514)
T 2vbk_A 67 NYQAIQNAIDAVASL-PSGGELFIPASNQAVGYIVGSTLLIP---GGVNIRGVGKA 118 (514)
T ss_dssp CHHHHHHHHHHHHTS-TTCEEEECCCCSSTTCEEESSCEEEC---TTEEEECCSTT
T ss_pred cHHHHHHHHHHHhhc-CCCeEEEECCCCcceeEEECCeEEec---CCeEEEEecCc
Confidence 467899999976432 12248899999 8974 57775 47999998763
No 57
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=36.93 E-value=57 Score=30.83 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=30.0
Q ss_pred EEEEEecCceEEEceEEeecCCCCCCCcccceeeee-------eeCCcEEEEeeEEEee
Q 039887 156 ATVAVDANYFVAINMKFENTAPHVVGSMGEQAVALR-------ISGTKAAFYNCSFYGA 207 (241)
Q Consensus 156 at~~V~a~~f~~~nitf~Nta~~~~~~~~~QAvAlr-------v~gd~~~f~nC~f~g~ 207 (241)
+.+.|.+++++++|..|.|.... +...+. +.+.+..+.+|.|.|-
T Consensus 119 ~~iav~G~~~~I~nn~I~~~~~g-------d~i~i~~~~~~~~l~g~~n~I~~N~I~Gk 170 (506)
T 1dbg_A 119 GLVAIYGSYNRITACVFDCFDEA-------NSAYITTSLTEDGKVPQHCRIDHCSFTDK 170 (506)
T ss_dssp CSEEECSSSCEEESCEEESCCSS-------CSCSEEECCCTTCCCCCSCEEESCEEECC
T ss_pred cceEEecCCeEEEeeEEEcCCCC-------ceeeEeecccceeeeccccEEECcEEECC
Confidence 44677789999999999987542 112222 3566667777777764
No 58
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=35.50 E-value=65 Score=30.67 Aligned_cols=36 Identities=8% Similarity=-0.065 Sum_probs=22.3
Q ss_pred eCCcEEEEeeEEEeece-e-EeeC-----CCcEEEeccEEEcc
Q 039887 193 SGTKAAFYNCSFYGAQD-T-LYDH-----KGLHYFNNCFIQGS 228 (241)
Q Consensus 193 ~gd~~~f~nC~f~g~QD-T-L~~~-----~gr~~~~~C~I~G~ 228 (241)
.+.++.+.||.+.+... . +-.. --.-.|+||.|.++
T Consensus 363 ks~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s 405 (549)
T 1x0c_A 363 YYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQ 405 (549)
T ss_dssp CSSSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEEC
T ss_pred CCCCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECc
Confidence 34788889999875432 2 2221 12467888888764
No 59
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=32.09 E-value=64 Score=29.36 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=35.7
Q ss_pred eeeeeeCCcEEEEeeEEEeece-eEeeCCCcEEEeccEEEccce
Q 039887 188 VALRISGTKAAFYNCSFYGAQD-TLYDHKGLHYFNNCFIQGSVD 230 (241)
Q Consensus 188 vAlrv~gd~~~f~nC~f~g~QD-TL~~~~gr~~~~~C~I~G~vD 230 (241)
.++++.++...+.++.|....+ .++....+..+++|.|.+.-|
T Consensus 108 ~~i~i~~~~~~i~gl~I~n~g~~GI~v~gs~~~i~n~~i~~n~~ 151 (400)
T 1ru4_A 108 YGFYVTGDYWYFKGVEVTRAGYQGAYVIGSHNTFENTAFHHNRN 151 (400)
T ss_dssp CSEEECSSCEEEESEEEESCSSCSEEECSSSCEEESCEEESCSS
T ss_pred eEEEEECCeEEEEeEEEEeCCCCcEEEeCCCcEEEeEEEECCCc
Confidence 4588899999999999954433 788876788899999999887
No 60
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=31.64 E-value=1.4e+02 Score=27.53 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=43.2
Q ss_pred EecCceEEEceEEeecCCCCCC----------------Ccccceeeeeee-----------CCcEEEEeeEEEee--cee
Q 039887 160 VDANYFVAINMKFENTAPHVVG----------------SMGEQAVALRIS-----------GTKAAFYNCSFYGA--QDT 210 (241)
Q Consensus 160 V~a~~f~~~nitf~Nta~~~~~----------------~~~~QAvAlrv~-----------gd~~~f~nC~f~g~--QDT 210 (241)
..+++++++|++|.|..+...| ..+..++|+... ..++.+.||.+.+. -..
T Consensus 219 ~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~g 298 (448)
T 3jur_A 219 VLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGG 298 (448)
T ss_dssp ESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEE
T ss_pred eccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcce
Confidence 3467899999999985332211 012334555543 35789999998432 224
Q ss_pred EeeCCC------cEEEeccEEEccce
Q 039887 211 LYDHKG------LHYFNNCFIQGSVD 230 (241)
Q Consensus 211 L~~~~g------r~~~~~C~I~G~vD 230 (241)
+-..+. .-+|+||++.|+-.
T Consensus 299 isiGS~~~~~v~nV~v~n~~~~~t~~ 324 (448)
T 3jur_A 299 LVIGSEMSGGVRNVVARNNVYMNVER 324 (448)
T ss_dssp EEECSSCTTCEEEEEEESCEEESCSE
T ss_pred EEECCcccCcEEEEEEEEEEEecccc
Confidence 544332 35799999987643
No 61
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=28.67 E-value=74 Score=30.92 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=27.2
Q ss_pred eeeeeeC--CcEEEEeeEEEeeceeEeeCC--CcEEEeccEEEccce
Q 039887 188 VALRISG--TKAAFYNCSFYGAQDTLYDHK--GLHYFNNCFIQGSVD 230 (241)
Q Consensus 188 vAlrv~g--d~~~f~nC~f~g~QDTL~~~~--gr~~~~~C~I~G~vD 230 (241)
-++.+.+ .++.++||.|.+....+..+. ....-+|.+|+|.+.
T Consensus 225 ~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~~~~v~NV~I~n~vs 271 (609)
T 3gq8_A 225 NGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMS 271 (609)
T ss_dssp CSEEECTTCEEEEEESEEEESSSEEEEEEECTTSCCCEEEEEEEEEE
T ss_pred ccEEccCCcccEEEEeeEEECCCCEEEEEecCCCCccccEEEECCEe
Confidence 3455532 578888888888877776542 224556666666543
No 62
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=26.00 E-value=68 Score=30.76 Aligned_cols=30 Identities=33% Similarity=0.516 Sum_probs=23.2
Q ss_pred CchHHHHHHhCCCCCCceEEEEEcCceEee-eEEe
Q 039887 82 FKTIREAINSIPPYNTRRVILEIKPGVYRE-KVSI 115 (241)
Q Consensus 82 f~TIq~Ai~aap~~~~~r~vI~I~~G~Y~E-~V~I 115 (241)
=..||+||+++..+ -+|+|.+|+|.- .|.+
T Consensus 173 t~aiq~Ai~~c~~g----~~v~vP~G~y~~g~i~l 203 (608)
T 2uvf_A 173 TKAIQQAIDSCKPG----CRVEIPAGTYKSGALWL 203 (608)
T ss_dssp HHHHHHHHHTCCTT----EEEEECSEEEEECCEEC
T ss_pred HHHHHHHHHhcCCC----CEEEECCCceEecceec
Confidence 46799999998764 389999999973 4444
No 63
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=24.88 E-value=1e+02 Score=30.76 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=28.8
Q ss_pred eeeeeeC--CcEEEEeeEEEeeceeEeeCC--CcEEEeccEEEcccee
Q 039887 188 VALRISG--TKAAFYNCSFYGAQDTLYDHK--GLHYFNNCFIQGSVDF 231 (241)
Q Consensus 188 vAlrv~g--d~~~f~nC~f~g~QDTL~~~~--gr~~~~~C~I~G~vDf 231 (241)
-++.+.+ .++.+.||.|.+.+..|..+. .--..+|.+|.|++.+
T Consensus 225 ~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~~gg~v~NV~I~gnis~ 272 (772)
T 3gqn_A 225 NGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSV 272 (772)
T ss_dssp CSEEECTTCEEEEEEEEEEESSSEEEEECCCTTSCCCEEEEEEEEEEE
T ss_pred ccEEecCCcccEEEEceEEECCCcEEEEEEeCCCCccccEEEECCEEe
Confidence 3455533 578899999988888887642 2235667777776544
No 64
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=22.23 E-value=2.3e+02 Score=22.33 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=35.7
Q ss_pred eEEEEEcCceEeeeEEecCCCCcEEEecCCCCCcEEEeccCCCCCCCCCCCCCccCcEEEEEecCceEEEce
Q 039887 99 RVILEIKPGVYREKVSIPKPLPFVTFLGNSSDPPTITGNDTASATGSDGKPLKTFQSATVAVDANYFVAINM 170 (241)
Q Consensus 99 r~vI~I~~G~Y~E~V~I~k~k~~ItL~G~g~~~tiIt~~~~~~~~~~~G~~~~t~~sat~~V~a~~f~~~ni 170 (241)
..+|.+..|. .+.+.+.+ ...++|...+..+.-.+.... ..-|.|.+..+.+.++++
T Consensus 67 ~l~L~v~~g~-g~~~~L~~---~~~~IGR~~~~dI~L~d~~VS-----------r~HA~I~~~~~~~~l~Dl 123 (157)
T 3oun_A 67 SVTLQLDDGS-GRTYQLRE---GSNIIGRGQDAQFRLPDTGVS-----------RRHLEIRWDGQVALLADL 123 (157)
T ss_dssp CCEEEETTTT-CCEEECCS---EEEEEESSTTCSEECCCTTSC-----------TTCEEEEECSSCEEEEEC
T ss_pred EEEEEEcCCC-CeEEEECC---CcEEEEeCCCCCEEeCCCCcC-----------hhHEEEEEECCEEEEEEC
Confidence 3577788876 44555654 256788766554433332221 235788888888999988
Done!