BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039892
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 165/295 (55%), Gaps = 8/295 (2%)
Query: 26 LSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFN 85
L I +Y+ SCP ++Q + + A +R+ FHDC + GCD+S+L+ ST N
Sbjct: 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 86 KAERDA-DINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
AE+DA N SL G F+VIT AK+A+E CP TVSC+DILA A RD + G Y V
Sbjct: 62 TAEKDAIPNNPSLRG--FEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEF 204
GR+D VS A++ +P P +Q+I+ FA + + EMV LSGAH+IG +HC+ F
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179
Query: 205 SGNIYNYSRIPYYDAHYNPRFAEALQKAC-ADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+ +YN++ D +P +A L+ C A+ + ++V DI++P+ DN+YY +
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ 239
Query: 264 KGLGLLESDHGLFNDPRTKPYVELYARD----QNEFFKALLELWRSLVFMVLRPE 314
LGLL SD L + V+ A + ++F +A++++ + V + E
Sbjct: 240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGE 294
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 153/282 (54%), Gaps = 15/282 (5%)
Query: 26 LSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFN 85
LS ++Y+ CP ++ + + A+ LRL FHDC + GCD+S+L+ T
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 86 KAERDADINL-SLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
E+ A N S+ G F+VI K+ +E CP VSC+DILAVA RD V +GG +NV
Sbjct: 62 TGEKTAGPNANSIRG--FEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEF 204
LGR+D + + +LP P +S +I F+ + F+ +E+V LSGAHTIG + C F
Sbjct: 120 LLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179
Query: 205 SGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPK 264
IYN S I +P +A++LQ C + LS F D+ +PNKFDN YY NL
Sbjct: 180 RTRIYNESNI-------DPTYAKSLQANCPSVGGDTNLSPF-DVTTPNKFDNAYYINLRN 231
Query: 265 GLGLLESDHGLFNDPRTKPYVELYARD----QNEFFKALLEL 302
GLL SD LFN T V Y+ + +F A++++
Sbjct: 232 KKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKM 273
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRS 180
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 239
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 240 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 280
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 153/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP+P + Q+ D F + ++VALSG HT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 239
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 240 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 280
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDMDLRTPTIFDNKYYVNLE 239
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 240 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 280
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 238
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 239 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 279
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 239
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 240 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 280
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 238
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 239 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 279
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 238
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 239 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 279
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 239
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 240 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 280
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 153/279 (54%), Gaps = 4/279 (1%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +YS +CP S I++ TI + A+ +RL FHDC +NGCD+SIL+ T
Sbjct: 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGS 61
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
++E++A N++ F+V+ KTALE CP VSCSD+LA+A+ V++ GGP + V
Sbjct: 62 IQSEKNAGPNVN-SARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTV 120
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEF 204
LGR+D + A ++P P +S I F+ + ++VALSGAHT G + C F
Sbjct: 121 LLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVF 180
Query: 205 SGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPK 264
+ ++N+S D N LQ+ C T++ D+ +P+ FDN Y+ NL
Sbjct: 181 NNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNL-DLSTPDAFDNNYFANLQS 239
Query: 265 GLGLLESDHGLFN--DPRTKPYVELYARDQNEFFKALLE 301
GLL+SD LF+ T V +A +Q FF+A +
Sbjct: 240 NDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQ 278
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 152/281 (54%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG H+ G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRF 179
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 238
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 239 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 279
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 151/281 (53%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL FHDC +NGCD+SIL+ +T
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VAL G HT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRF 179
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 238
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 239 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 279
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 151/281 (53%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ LRL F DC +NGCD+SIL+ +T
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTS 61
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 239
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 240 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 280
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 150/281 (53%), Gaps = 6/281 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y SCP S I++DTI N+ + P AA+ L L F DC +NGCD+SIL+ +T
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTS 60
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+ E+DA N + F VI R K A+E CP TVSC+D+L +A + VT+ GGP + V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFS-VQEMVALSGAHTIGFSHCNE 203
LGR+D + NLP P + Q+ D F + ++VALSG HT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+YN+S D N + + L+ C N + V D+ +P FDN YY NL
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDFDLRTPTIFDNKYYVNLE 238
Query: 264 KGLGLLESDHGLFNDPR---TKPYVELYARDQNEFFKALLE 301
+ GL++SD LF+ P T P V +A FF A +E
Sbjct: 239 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVE 279
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 150/277 (54%), Gaps = 10/277 (3%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+LS D Y+KSCP QI++ + AA+ +RL FHDC +NGCD+S+L+
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA-- 58
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+E+ A N++ F+VI K A+E CP VSC+DIL +A RD V + GGP + V
Sbjct: 59 -DSEKLAIPNIN-SARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRV 116
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEF 204
LGRKD V+ + NLP P P+ II F ++ ++VALSGAHT G + C F
Sbjct: 117 ALGRKDGLVAN-QNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVF 175
Query: 205 SGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPK 264
S ++N++ DA LQ C N ++ D + + FDN Y++NL +
Sbjct: 176 SNRLFNFTGAGNPDATLETSLLSNLQTVCP-LGGNSNITAPLDRSTTDTFDNNYFKNLLE 234
Query: 265 GLGLLESDHGLFNDP----RTKPYVELYARDQNEFFK 297
G GLL SD LF+ TK VE Y+R Q+ FF+
Sbjct: 235 GKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFR 271
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 146/274 (53%), Gaps = 9/274 (3%)
Query: 26 LSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFN 85
LS D+Y ++CPR I+++ + AA LRL FHDC + GCD+S+L+ +
Sbjct: 9 LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATG 68
Query: 86 KAERDADINLSLPGDAFDVITRAKTALELQCPN-TVSCSDILAVATRDLVTMVGGPYYNV 144
E+ A NL+L AF + + LE +C VSCSDILA+A RD V + GGP Y V
Sbjct: 69 PGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRV 128
Query: 145 YLGRKDVR-VSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNE 203
LGR+D R + DV +LP P+ + ++ + + ++V +SG HTIG +HC+
Sbjct: 129 PLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHCSS 188
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
F ++ P D +P F L++ C K D+ +PN FDN YY +L
Sbjct: 189 FEDRLF-----PRPDPTISPTFLSRLKRTCP--AKGTDRRTVLDVRTPNVFDNKYYIDLV 241
Query: 264 KGLGLLESDHGLFNDPRTKPYVELYARDQNEFFK 297
GL SD LF + T+P VE +A+ Q +FF+
Sbjct: 242 NREGLFVSDQDLFTNAITRPIVERFAQSQQDFFE 275
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 154/279 (55%), Gaps = 6/279 (2%)
Query: 26 LSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATL-RLFFHDCLLNGCDSSILITSTPF 84
L+ +Y+ +CP S +++ TI + S + A+L RL FHDC + GCD+SIL+ ++
Sbjct: 4 LNATFYAGTCPNASAMVR-TIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGS 62
Query: 85 NKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNV 144
+E++A N + F+V+ KTALE CP VSC+D+LA+A++ V++ GGP + V
Sbjct: 63 IISEKNAGPNAN-SARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTV 121
Query: 145 YLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEF 204
LGR+D + A ++P PT +S I F+ + ++VALSGAHT G + C F
Sbjct: 122 DLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGVF 181
Query: 205 SGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPK 264
S ++N+S D N LQ+ C + + S D+ +P+ FDN Y+ NL
Sbjct: 182 SNRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRG-SGSTNLDLSTPDAFDNNYFTNLQS 240
Query: 265 GLGLLESDHGLFN--DPRTKPYVELYARDQNEFFKALLE 301
GLL+SD LF+ T V +A +Q FF+A +
Sbjct: 241 NNGLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQ 279
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 152/276 (55%), Gaps = 6/276 (2%)
Query: 25 RLSIDYYSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPF 84
+L+ +Y ++CP I+ I + T P A+ +RL FHDC + GCD S+L+ +T
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60
Query: 85 NKAERDADINL-SLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYN 143
++E+DA N+ S+ G DV+ KTA+E CP+TVSC+DILA+A + GGP +
Sbjct: 61 IESEQDALPNINSIRG--LDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWP 118
Query: 144 VYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNE 203
V LGR+D + NLP P ++Q+ FA + + ++V LSG HT G + C+
Sbjct: 119 VPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCST 178
Query: 204 FSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
F +YN+S D N + E L+ C L+ D+ +P++FDN YY NL
Sbjct: 179 FINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNL-DLSTPDQFDNRYYSNLL 237
Query: 264 KGLGLLESDHGLFNDP--RTKPYVELYARDQNEFFK 297
+ GLL+SD LF+ P T P V ++ +QN FF
Sbjct: 238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFS 273
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 112/271 (41%), Gaps = 25/271 (9%)
Query: 42 MQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERDADINLSLPGDA 101
++D I+ K P+ +RL +H+ C +P + + R L
Sbjct: 16 IEDMISEKLELGPSL----IRLAWHEAASYDC---FKKDGSPNSASMRFKPECLYAGNKG 68
Query: 102 FDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEG 161
D+ +A L+ + P +S +D+ +A + +GGP GR D + +G
Sbjct: 69 LDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDG 127
Query: 162 NLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHY 221
LP + S + +VF + F+ QE VAL GAHT G +H EFSG Y+ +
Sbjct: 128 RLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETHI-EFSG--YHGPWTHDKNGFD 184
Query: 222 NPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPKGLGLLESDHGLFNDPRT 281
N F + L + D+ NP + L +L SD L DP
Sbjct: 185 NSFFTQLLDE---DWVLNPKVEQMQ-----------LMDRATTKLMMLPSDVCLLLDPSY 230
Query: 282 KPYVELYARDQNEFFKALLELWRSLVFMVLR 312
+ YVELYA+D + F K ++ L + R
Sbjct: 231 RKYVELYAKDNDRFNKDFANAFKKLTELGTR 261
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 25/271 (9%)
Query: 42 MQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERDADINLSLPGDA 101
++D I+ K P+ +RL +H+ C +P + + R L
Sbjct: 16 IEDMISEKLELGPSL----IRLAWHEAASYDC---FKKDGSPNSASMRFKPECLYAGNKG 68
Query: 102 FDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEG 161
D+ +A L+ + P +S +D+ +A + +GGP GR D + +G
Sbjct: 69 LDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDG 127
Query: 162 NLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHY 221
LP + S + +VF + F+ QE VAL GAHT G H EFSG Y+ +
Sbjct: 128 RLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHI-EFSG--YHGPWTHDKNGFD 184
Query: 222 NPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPKGLGLLESDHGLFNDPRT 281
N F + L + D+ NP + L +L SD L DP
Sbjct: 185 NSFFTQLLDE---DWVLNPKVEQMQ-----------LMDRATTKLMMLPSDVCLLLDPSY 230
Query: 282 KPYVELYARDQNEFFKALLELWRSLVFMVLR 312
+ YVELYA+D + F K ++ L + R
Sbjct: 231 RKYVELYAKDNDRFNKDFANAFKKLTELGTR 261
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 25/271 (9%)
Query: 42 MQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERDADINLSLPGDA 101
++D I+ K P+ +RL +H+ C +P + + R L
Sbjct: 15 IEDMISEKLELGPSL----IRLAWHEAASYDC---FKKDGSPNSASMRFKPECLYAGNKG 67
Query: 102 FDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEG 161
D+ +A L+ + P +S +D+ +A + +GGP GR D + +G
Sbjct: 68 LDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDG 126
Query: 162 NLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHY 221
LP + S + +VF + F+ QE VAL GAHT G H EFSG Y+ +
Sbjct: 127 RLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHI-EFSG--YHGPWTHDKNGFD 183
Query: 222 NPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPKGLGLLESDHGLFNDPRT 281
N F + L + D+ NP + L +L SD L DP
Sbjct: 184 NSFFTQLLDE---DWVLNPKVEQMQ-----------LMDRATTKLMMLPSDVCLLLDPSY 229
Query: 282 KPYVELYARDQNEFFKALLELWRSLVFMVLR 312
+ YVELYA+D + F K ++ L + R
Sbjct: 230 RKYVELYAKDNDRFNKDFANAFKKLTELGTR 260
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 111/283 (39%), Gaps = 59/283 (20%)
Query: 31 YSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERD 90
Y K+ + + ++ I K+ A LRL +H G T PF +
Sbjct: 23 YQKAVEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGPFGTIKHP 74
Query: 91 ADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
A++ S + D+ R L+ + P +S +D +A V + GGP + GR+D
Sbjct: 75 AELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 132
Query: 151 VRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSH--CNEFSGN 207
EG LP T + DVF K + Q++VALSG HTIG +H + F G
Sbjct: 133 ---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKEASGFEGP 189
Query: 208 IYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNL----P 263
+ NP + FDN Y+ L
Sbjct: 190 ----------------------------WTSNPLI-----------FDNSYFTELLSGEK 210
Query: 264 KGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
+GL L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 211 EGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 111/281 (39%), Gaps = 55/281 (19%)
Query: 31 YSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERD 90
Y K+ + + ++ I K+ A LRL +H G T PF +
Sbjct: 23 YQKAVEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGPFGTIKHP 74
Query: 91 ADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
A++ S + D+ R L+ + P +S +D +A V + GGP + GR+D
Sbjct: 75 AELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 132
Query: 151 VRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSHCNEFSGNIY 209
EG LP T + DVF K + Q++VALSG HTIG +H E SG
Sbjct: 133 ---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSG--- 185
Query: 210 NYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNL----PKG 265
+ NP + FDN Y+ L +G
Sbjct: 186 ----------------------FEGPWTSNPLI-----------FDNSYFTELLSGEKEG 212
Query: 266 LGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
L L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 213 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 111/281 (39%), Gaps = 55/281 (19%)
Query: 31 YSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERD 90
Y K+ + + ++ I K+ A LRL +H G T PF +
Sbjct: 23 YQKAVEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGPFGTIKHP 74
Query: 91 ADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
A++ S + D+ R L+ + P +S +D +A V + GGP + GR+D
Sbjct: 75 AELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 132
Query: 151 VRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSHCNEFSGNIY 209
EG LP T + DVF K + Q++VALSG HTIG +H E SG
Sbjct: 133 ---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSG--- 185
Query: 210 NYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNL----PKG 265
+ NP + FDN Y+ L +G
Sbjct: 186 ----------------------FEGPWTSNPLI-----------FDNSYFTELLSGEKEG 212
Query: 266 LGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
L L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 213 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 111/281 (39%), Gaps = 55/281 (19%)
Query: 31 YSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERD 90
Y K+ + + ++ I K+ A LRL +H G T PF +
Sbjct: 11 YQKAVEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGPFGTIKHP 62
Query: 91 ADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
A++ S + D+ R L+ + P +S +D +A V + GGP + GR+D
Sbjct: 63 AELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 120
Query: 151 VRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSHCNEFSGNIY 209
EG LP T + DVF K + Q++VALSG HTIG +H E SG
Sbjct: 121 ---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSG--- 173
Query: 210 NYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNL----PKG 265
+ NP + FDN Y+ L +G
Sbjct: 174 ----------------------FEGPWTSNPLI-----------FDNSYFTELLSGEKEG 200
Query: 266 LGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
L L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 201 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 241
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 105/276 (38%), Gaps = 56/276 (20%)
Query: 32 SKSCPRFSQIMQDTITNKQ------ITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFN 85
KS P S Q I + I A LRL +H G S T PF
Sbjct: 1 GKSYPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSA---GTFDSKTKTGGPFG 57
Query: 86 KAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVY 145
+ A++ + D+ R ++ Q P VS +D +A V + GGP +
Sbjct: 58 TIKHQAELAHGA-NNGLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVPFH 115
Query: 146 LGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSHCNEF 204
GR+D EG LP T + DVF K S Q++VALSG HTIG +H E
Sbjct: 116 PGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAH-KER 171
Query: 205 SGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLPK 264
SG + NP + FDN Y+ L
Sbjct: 172 SG-------------------------FEGPWTSNPLI-----------FDNSYFTELLT 195
Query: 265 GL--GLLE--SDHGLFNDPRTKPYVELYARDQNEFF 296
G GLL+ SD L D +P VE YA D++ FF
Sbjct: 196 GEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFF 231
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPK--PTMPMSQIIDVF 177
V+ +D+ +A+ + GGP + GR DV + EG LP P P + DVF
Sbjct: 87 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVF 146
Query: 178 AKRKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQ 237
+ + +E+VALSGAHT+G S + SG + + K D
Sbjct: 147 YRMGLNDKEIVALSGAHTLGRSRPDR-SG------------------WGKPETKYTKDGP 187
Query: 238 KNPTLSVFNDIMSPNKFDNLYYQNLP----KGLGLLESDHGLFNDPRTKPYVELYARDQN 293
P + KFDN Y++++ + L +L +D LF DP K Y E YA D
Sbjct: 188 GAPGGQSWTAQWL--KFDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEKYAADPE 245
Query: 294 EFFKALLE 301
FFK E
Sbjct: 246 AFFKDYAE 253
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 111/281 (39%), Gaps = 55/281 (19%)
Query: 31 YSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERD 90
Y K+ + + ++ I K+ A L+L +H G T PF +
Sbjct: 11 YQKAVEKAKKKLRGFIAEKRC-----APLMLKLAWHSA---GTFDKGTKTGGPFGTIKHP 62
Query: 91 ADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
A++ S + D+ R L+ + P +S +D +A V + GGP + GR+D
Sbjct: 63 AELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 120
Query: 151 VRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSHCNEFSGNIY 209
EG LP T + DVF K + Q++VALSG HTIG +H E SG
Sbjct: 121 ---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSG--- 173
Query: 210 NYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNL----PKG 265
+ NP + FDN Y+ L +G
Sbjct: 174 ----------------------FEGPWTSNPLI-----------FDNSYFTELLSGEKEG 200
Query: 266 LGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
L L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 201 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 241
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 110/281 (39%), Gaps = 55/281 (19%)
Query: 31 YSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERD 90
Y K+ + + ++ I K+ A LRL H G T PF +
Sbjct: 23 YQKAVEKAKKKLRGFIAEKRC-----APLMLRLAAHSA---GTFDKGTKTGGPFGTIKHP 74
Query: 91 ADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
A++ S + D+ R L+ + P +S +D +A V + GGP + GR+D
Sbjct: 75 AELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 132
Query: 151 VRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSHCNEFSGNIY 209
EG LP T + DVF K + Q++VALSG HTIG +H E SG
Sbjct: 133 ---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSG--- 185
Query: 210 NYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNL----PKG 265
+ NP + FDN Y+ L +G
Sbjct: 186 ----------------------FEGPWTSNPLI-----------FDNSYFTELLSGEKEG 212
Query: 266 LGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
L L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 213 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 47/232 (20%)
Query: 80 TSTPFNKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGG 139
T PF + A++ S + D+ R L+ + P +S +D +A V + GG
Sbjct: 64 TGGPFGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGG 121
Query: 140 PYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGF 198
P + GR+D EG LP T + DVF K + Q++VALSG HTIG
Sbjct: 122 PEVPFHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGA 178
Query: 199 SHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLY 258
+H E SG P + NP + FDN Y
Sbjct: 179 AH-KERSG-------------FEGP------------WTSNPLI-----------FDNSY 201
Query: 259 YQNL----PKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
+ L +GL L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 202 FTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 110/281 (39%), Gaps = 55/281 (19%)
Query: 31 YSKSCPRFSQIMQDTITNKQITSPTTAAATLRLFFHDCLLNGCDSSILITSTPFNKAERD 90
Y K+ + + ++ I K+ A L L +H G T PF +
Sbjct: 11 YQKAVEKAKKKLRGFIAEKRC-----APLMLALAWHSA---GTFDKGTKTGGPFGTIKHP 62
Query: 91 ADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
A++ S + D+ R L+ + P +S +D +A V + GGP + GR+D
Sbjct: 63 AELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED 120
Query: 151 VRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGFSHCNEFSGNIY 209
EG LP T + DVF K + Q++VALSG HTIG +H E SG
Sbjct: 121 ---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSGF-- 174
Query: 210 NYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYYQNL----PKG 265
+ NP + FDN Y+ L +G
Sbjct: 175 -----------------------EGPWTSNPLI-----------FDNSYFTELLSGEKEG 200
Query: 266 LGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
L L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 201 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 241
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 94/232 (40%), Gaps = 47/232 (20%)
Query: 80 TSTPFNKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGG 139
T PF + A++ S + D+ R L+ + P +S +D +A V + GG
Sbjct: 64 TGGPFGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGG 121
Query: 140 PYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGF 198
P + GR+D EG LP T + DVF K + Q++VALSG HTIG
Sbjct: 122 PEVPFHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGA 178
Query: 199 SHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLY 258
+H E SG + NP + FDN Y
Sbjct: 179 AH-KERSGF-------------------------EGPWTSNPLI-----------FDNSY 201
Query: 259 YQNL----PKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
+ L +GL L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 202 FTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 94/232 (40%), Gaps = 47/232 (20%)
Query: 80 TSTPFNKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGG 139
T PF + A++ S + D+ R L+ + P +S +D +A V + GG
Sbjct: 64 TGGPFGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGG 121
Query: 140 PYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGF 198
P + GR+D EG LP T + DVF K + Q++VALSG HTIG
Sbjct: 122 PEVPFHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGA 178
Query: 199 SHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLY 258
+H E SG + NP + FDN Y
Sbjct: 179 AH-KERSGF-------------------------EGPWTSNPLI-----------FDNSY 201
Query: 259 YQNL----PKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
+ L +GL L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 202 FTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 253
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 94/232 (40%), Gaps = 47/232 (20%)
Query: 80 TSTPFNKAERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATRDLVTMVGG 139
T PF + A++ S + D+ R L+ + P +S +D +A V + GG
Sbjct: 52 TGGPFGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGG 109
Query: 140 PYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKR-KFSVQEMVALSGAHTIGF 198
P + GR+D EG LP T + DVF K + Q++VALSG HTIG
Sbjct: 110 PEVPFHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGA 166
Query: 199 SHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLY 258
+H E SG + NP + FDN Y
Sbjct: 167 AH-KERSGF-------------------------EGPWTSNPLI-----------FDNSY 189
Query: 259 YQNL----PKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
+ L +GL L SD L +DP +P V+ YA D++ FF E + L
Sbjct: 190 FTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKL 241
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 75/207 (36%), Gaps = 57/207 (27%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAHT+G +H SG Y+ +
Sbjct: 161 LNMNDREVVALMGAHTLGKTHLKN-SG----------YEGPW------------------ 191
Query: 240 PTLSVFNDIMSPNKFDNLYYQNL-------------------PKGLGLLESDHGLFNDPR 280
+PN FDN +Y NL G +L +D+ L DP+
Sbjct: 192 --------TANPNVFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 281 TKPYVELYARDQNEFFKALLELWRSLV 307
V+ YA DQ++FFK + + L+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKLL 270
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAHT+G +H + N +DA N + +
Sbjct: 161 LNMNDREVVALMGAHTLGKTH-------LKNSGYEGPWDATNNV------------FDNS 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 KYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H ++ Y F A ++
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK---------------NSGYEGPFGAANNVFTNEF--- 204
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 205 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 GYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H ++ Y + A +Y
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK---------------NSGYEGPWGAANNVFTNEY--- 199
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 200 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 95 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 153
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H + Y F A ++
Sbjct: 154 LNMNDREVVALMGAHALGKTHLKR---------------SGYEGPFGAANNVFTNEF--- 195
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 196 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 254
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 255 FSKAFEKLL 263
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACAD--YQ 237
+ +E+VAL GAH +G +H SG Y+ + CA+ +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLKN-SG----------YEGPW----------GCANNVFT 201
Query: 238 KNPTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFF 296
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FF
Sbjct: 202 NEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFF 261
Query: 297 KALLELWRSLV 307
K + + L+
Sbjct: 262 KDFSKAFEKLL 272
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALKGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VALSGAHT+G +H N + + +
Sbjct: 161 LNMNDREVVALSGAHTLGKTHLK-------------------NSGYEGPWTANNNVFDNS 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYLQLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 23/190 (12%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H SG E Q A + N
Sbjct: 158 LNMNDREVVALMGAHALGKTHLKN-SG-------------------YEGPQGAANNVFTN 197
Query: 240 P-TLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFK 297
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 198 EFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFK 257
Query: 298 ALLELWRSLV 307
+ + L+
Sbjct: 258 DFSKAFEKLL 267
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAHT+G +H N + + +
Sbjct: 161 LNMNDREVVALMGAHTLGKTHLK-------------------NSGYEGPWTANNNVFDNS 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 23/190 (12%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H SG E Q A + N
Sbjct: 163 LNMNDREVVALMGAHALGKTHLKN-SG-------------------YEGPQGAANNVFTN 202
Query: 240 P-TLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFK 297
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 203 EFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFK 262
Query: 298 ALLELWRSLV 307
+ + L+
Sbjct: 263 DFSKAFEKLL 272
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 73/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 101 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 159
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H + Y F A ++
Sbjct: 160 LNMNDREVVALMGAHALGKTHLKR---------------SGYEGPFGAANNVFTNEF--- 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ+ FFK
Sbjct: 202 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDRFFKD 260
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 261 FSKAFEKLL 269
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 163
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 164 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 204
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 205 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 264
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 265 FSKAFEKLL 273
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 101 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 159
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 160 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 200
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 201 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 260
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 261 FSKAFEKLL 269
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYIMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPYGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNCFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 23/189 (12%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 163
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H SG Y N F
Sbjct: 164 LNMNDREVVALMGAHALGKTHLKN-SG---------YEGGGANNVFTNEF---------- 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 262
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 263 FSKAFEKLL 271
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 23/189 (12%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 100 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 158
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H SG Y N F
Sbjct: 159 LNMNDREVVALMGAHALGKTHLKN-SG---------YEGGGANNVFTNEF---------- 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 257
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 258 FSKAFEKLL 266
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 23/189 (12%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H SG Y N F
Sbjct: 158 LNMNDREVVALMGAHALGKTHLKN-SG---------YEGGGANNVFTNEF---------- 197
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 198 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 256
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 257 FSKAFEKLL 265
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDMDKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDYDKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPGGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPGGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPGGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEWQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H + Y + A ++
Sbjct: 163 LNMNDREVVALMGAHALGKTHLKR---------------SGYEGPWGAANNVFTNEF--- 204
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 205 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 100 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 158
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 159 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPGGAANNVFTNE 199
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 200 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 259
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 260 FSKAFEKLL 268
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPGGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H + Y + A ++
Sbjct: 163 LNMNDREVVALMGAHALGKTHLKR---------------SGYEGPWGAANNVFTNEF--- 204
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 205 -YLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H + Y + A ++
Sbjct: 158 LNMNDREVVALMGAHALGKTHLKR---------------SGYEGPWGAANNVFTNEF--- 199
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 200 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H + Y + A ++
Sbjct: 161 LNMNDREVVALMGAHALGKTHLKR---------------SGYEGPWGAANNVFTNEF--- 202
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 203 -YLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAHT+G +H N + + +
Sbjct: 161 LNMNDREVVALMGAHTLGKTHLK-------------------NSGYEGPWTANNNVFDNS 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYLQLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 163
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 164 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 204
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +++ L DP+ V+ YA DQ++FFK
Sbjct: 205 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTEYSLIQDPKYLSIVKEYANDQDKFFKD 264
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 265 FSKAFEKLL 273
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 104 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 162
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 163 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 203
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +++ L DP+ V+ YA DQ++FFK
Sbjct: 204 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKD 263
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 264 FSKAFEKLL 272
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMHLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 161 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPGGAANNVFTNE 201
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +++ L DP+ V+ YA DQ++FFK
Sbjct: 202 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 105 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 163
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H N + A +
Sbjct: 164 LNMNDREVVALMGAHALGKTHLK-------------------NSGYEGPWGAANNVFTNE 204
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L + + L DP+ V+ YA DQ++FFK
Sbjct: 205 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTAYSLIQDPKYLSIVKEYANDQDKFFKD 264
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 265 FSKAFEKLL 273
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G + N + A +
Sbjct: 158 LNMNDREVVALMGAHALGKTELK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
With Phosphate Bound, Ph 6, 100k
Length = 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 100 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 158
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GA +G +H N + A +
Sbjct: 159 LNMNDREVVALMGAGALGKTHLK-------------------NSGYEGPWGAANNVFTNE 199
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 200 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 259
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 260 FSKAFEKLL 268
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
pdb|1CCG|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 99 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 157
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GA +G +H N + A +
Sbjct: 158 LNMNDREVVALMGAGALGKTHLK-------------------NSGYEGPWGAANNVFTNE 198
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 199 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 258
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 259 FSKAFEKLL 267
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
Ph 6, 100k
pdb|1DSG|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 5, Room Temperature.
pdb|1DSO|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 6, Room Temperature.
pdb|1DSP|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 7, Room Temperature
Length = 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 100 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDAGYVRTFFQR 158
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GA +G +H N + A +
Sbjct: 159 LNMNDREVVALMGAGALGKTHLK-------------------NSGYEGPWGAANNVFTNE 199
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L +D+ L DP+ V+ YA DQ++FFK
Sbjct: 200 FYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKD 259
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 260 FSKAFEKLL 268
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 21/189 (11%)
Query: 120 VSCSDILAVATRDLVTMVGGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAK 179
+S D+ ++ V + GP GR D D G LP + F +
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLPDADKDADYVRTFFQR 160
Query: 180 RKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKN 239
+ +E+VAL GAH +G +H + Y + A ++
Sbjct: 161 LNMNDREVVALMGAHALGKTHLKR---------------SGYEGPWGAANNVFTNEF--- 202
Query: 240 PTLSVFNDIMSPNKFD-NLYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKA 298
L++ N+ K D N + G +L + + L DP+ V+ YA DQ++FFK
Sbjct: 203 -YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTXYSLIQDPKYLSIVKEYANDQDKFFKD 261
Query: 299 LLELWRSLV 307
+ + L+
Sbjct: 262 FSKAFEKLL 270
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 52/275 (18%)
Query: 38 FSQIMQDTITNKQITSPTTAAATLRLFFHDCLL----------NGCDSSILITSTPFNKA 87
+Q +Q+TI + A +RL FHD + G D S+L+ F
Sbjct: 20 LAQDLQETIFQNECGE--DAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLL----FPTV 73
Query: 88 ERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATR-DLVTMVGGPYYNVYL 146
E + N + ++I +Q NT+S +D++ A L G P
Sbjct: 74 EPNFSANNGIDDSVNNLIPF------MQKHNTISAADLVQFAGAVALSNCPGAPRLEFLA 127
Query: 147 GRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRK-FSVQEMVALSGAHTIGFSHCNEFS 205
GR + + A V+G +P+P +++I+ F F+ E+V+L +H++ ++ + +
Sbjct: 128 GRPNKTI---AAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARANKVDQT 184
Query: 206 GNIYNYSRIPY-YDAHYNPRFAEALQKACA-DYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+ + P+ +D F E L K N T ++ SP LP
Sbjct: 185 IDAAPFDSTPFTFDTQV---FLEVLLKGVGFPGSANNT----GEVASP----------LP 227
Query: 264 KGLG------LLESDHGLFNDPRTKPYVELYARDQ 292
G G L+SD L +DPRT + + +Q
Sbjct: 228 LGSGSDTGEMRLQSDFALAHDPRTACIWQGFVNEQ 262
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 52/275 (18%)
Query: 38 FSQIMQDTITNKQITSPTTAAATLRLFFHDCLL----------NGCDSSILITSTPFNKA 87
+Q +Q+TI + A +RL FHD + G D S+L+ F
Sbjct: 20 LAQDLQETIFQNECGQ--DAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLL----FPTV 73
Query: 88 ERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATR-DLVTMVGGPYYNVYL 146
E + N + ++I +Q NT+S +D++ A L G P
Sbjct: 74 EPNFSANNGIDDSVNNLIPF------MQKHNTISAADLVQFAGAVALSNCPGAPRLEFLA 127
Query: 147 GRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRK-FSVQEMVALSGAHTIGFSHCNEFS 205
GR + + A V+G +P+P +++I+ F F+ E+V+L +H++ ++ + +
Sbjct: 128 GRPNKTI---AAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARANKVDQT 184
Query: 206 GNIYNYSRIPY-YDAHYNPRFAEALQKACA-DYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+ + P+ +D F E L K N T ++ SP LP
Sbjct: 185 IDAAPFDSTPFTFDTQV---FLEVLLKGVGFPGSANNT----GEVASP----------LP 227
Query: 264 KGLG------LLESDHGLFNDPRTKPYVELYARDQ 292
G G L+SD L +DPRT + + +Q
Sbjct: 228 LGSGSDTGEMRLQSDFALAHDPRTACIWQGFVNEQ 262
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 52/275 (18%)
Query: 38 FSQIMQDTITNKQITSPTTAAATLRLFFHDCLL----------NGCDSSILITSTPFNKA 87
+Q +Q+TI + A +RL FHD + G D S+L+ F
Sbjct: 20 LAQDLQETIFQNECGE--DAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLL----FPTV 73
Query: 88 ERDADINLSLPGDAFDVITRAKTALELQCPNTVSCSDILAVATR-DLVTMVGGPYYNVYL 146
E + N + ++I +Q NT+S +D++ A L G P
Sbjct: 74 EPNFSANNGIDDSVNNLIPF------MQKHNTISAADLVQFAGAVALSNCPGAPRLEFLA 127
Query: 147 GRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRK-FSVQEMVALSGAHTIGFSHCNEFS 205
GR + + A V+G +P+P +++I+ F F+ E+V+L +H++ + + +
Sbjct: 128 GRPNKTI---AAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQT 184
Query: 206 GNIYNYSRIPY-YDAHYNPRFAEALQKACA-DYQKNPTLSVFNDIMSPNKFDNLYYQNLP 263
+ + P+ +D F E L K N T ++ SP LP
Sbjct: 185 IDAAPFDSTPFTFDTQV---FLEVLLKGVGFPGSANNT----GEVASP----------LP 227
Query: 264 KGLG------LLESDHGLFNDPRTKPYVELYARDQ 292
G G L+SD L +DPRT + + +Q
Sbjct: 228 LGSGSDTGEMRLQSDFALAHDPRTACIWQGFVNEQ 262
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 44/233 (18%)
Query: 60 TLRLFFHDCLL-------NGCDSSILITSTPFNKAERDADINLSLPGDA-FDVITRAKTA 111
+LRL FHD + G D SI+ T I + P +A D I A+
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSIIAFDT----------IETNFPANAGIDEIVSAQKP 90
Query: 112 LELQCPNTVSCSDILAVATRDLVTMV-GGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPM 170
+ + +S D + A V+ GG +LGR D + AA + +P+P +
Sbjct: 91 FVAK--HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSV 145
Query: 171 SQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIP-YYDAHYNPRFAEAL 229
I+ FS E+V+L +H+I + + S + P +D+ + F E
Sbjct: 146 DSILARMGDAGFSPVEVVSLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQF---FIETQ 202
Query: 230 QKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP-KGLGLLESDHGLFNDPRT 281
K + P DN P +G L+SDH L DP+T
Sbjct: 203 LKG---------------RLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQT 240
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 211 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 259
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 EGNLPKPTMPMSQIIDVFAKRKFSVQEMVAL-SGAHTIGFSHCNEFSGNI 208
+GN P P I D FA+ + +E VAL +G HT G +H + N+
Sbjct: 245 DGN-PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV 293
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 89/233 (38%), Gaps = 44/233 (18%)
Query: 60 TLRLFFHDCLL-------NGCDSSILITSTPFNKAERDADINLSLPGDA-FDVITRAKTA 111
+LRL FHD + G D SI+ T I + P +A D I A+
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSIIAFDT----------IETNFPANAGIDEIVSAQKP 90
Query: 112 LELQCPNTVSCSDILAVATRDLVTMV-GGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPM 170
+ + +S D + A V+ GG +LGR D + AA + +P+P +
Sbjct: 91 FVAK--HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPQDSV 145
Query: 171 SQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIP-YYDAHYNPRFAEAL 229
I+ FS E+V L +H+I + + S + P +D+ + F E
Sbjct: 146 DSILARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQF---FIETQ 202
Query: 230 QKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP-KGLGLLESDHGLFNDPRT 281
K + P DN P +G L+SDH L DP+T
Sbjct: 203 LKG---------------RLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQT 240
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 89/233 (38%), Gaps = 44/233 (18%)
Query: 60 TLRLFFHDCLL-------NGCDSSILITSTPFNKAERDADINLSLPGDA-FDVITRAKTA 111
+LRL FHD + G D SI+ T I + P +A D I A+
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSIIAFDT----------IETNFPANAGIDEIVSAQKP 90
Query: 112 LELQCPNTVSCSDILAVATRDLVTMV-GGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPM 170
+ + +S D + A V+ GG +LGR D + AA + +P+P +
Sbjct: 91 FVAK--HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSV 145
Query: 171 SQIIDVFAKRKFSVQEMVALSGAHTIGFSHCNEFSGNIYNYSRIP-YYDAHYNPRFAEAL 229
I+ FS E+V L +H+I + + S + P +D+ + F E
Sbjct: 146 DSILARMGDAGFSPVEVVYLLASHSIAAADKVDPSIPGTPFDSTPGVFDSQF---FIETQ 202
Query: 230 QKACADYQKNPTLSVFNDIMSPNKFDNLYYQNLP-KGLGLLESDHGLFNDPRT 281
K + P DN P +G L+SDH L DP+T
Sbjct: 203 LKG---------------RLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQT 240
>pdb|1IO2|A Chain A, Crystal Structure Of Type 2 Ribonuclease H From
Hyperthermophilic Archaeon, Thermococcus Kodakaraensis
Kod1
Length = 213
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 270 ESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSLVFMVLRPEEEER 318
E G +DPRT+ ++E Y R+ EF + + W++L + + E E++
Sbjct: 165 EIGSGYPSDPRTRAFLENYYREHGEFPPIVRKGWKTLKKIAEKVESEKK 213
>pdb|2DFH|A Chain A, Crystal Structure Of Tk-Rnase Hii(1-212)-C
Length = 221
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 274 GLFNDPRTKPYVELYARDQNEFFKALLELWRSLVFMVLRPEEEE 317
G +DPRT+ ++E Y R+ EF + + W++L + + E E+
Sbjct: 169 GYPSDPRTRAFLENYYREHGEFPPIVRKGWKTLKKIAEKVESEK 212
>pdb|2PFD|A Chain A, Anisotropically Refined Structure Of Ftcd
pdb|2PFD|B Chain B, Anisotropically Refined Structure Of Ftcd
pdb|2PFD|C Chain C, Anisotropically Refined Structure Of Ftcd
pdb|2PFD|D Chain D, Anisotropically Refined Structure Of Ftcd
Length = 541
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 115 QCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
QC N +SC L VA + L T V G Y+NV + KD
Sbjct: 470 QCGN-LSCLSDLQVAAKALETGVFGAYFNVLINLKD 504
>pdb|1TT9|A Chain A, Structure Of The Bifunctional And Golgi Associated
Formiminotransferase Cyclodeaminase Octamer
pdb|1TT9|B Chain B, Structure Of The Bifunctional And Golgi Associated
Formiminotransferase Cyclodeaminase Octamer
pdb|1TT9|C Chain C, Structure Of The Bifunctional And Golgi Associated
Formiminotransferase Cyclodeaminase Octamer
pdb|1TT9|D Chain D, Structure Of The Bifunctional And Golgi Associated
Formiminotransferase Cyclodeaminase Octamer
Length = 541
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 115 QCPNTVSCSDILAVATRDLVTMVGGPYYNVYLGRKD 150
QC N +SC L VA + L T V G Y+NV + KD
Sbjct: 470 QCGN-LSCLSDLQVAAKALETGVFGAYFNVLINLKD 504
>pdb|2DFF|A Chain A, Crystal Structure Of Tk-Rnase Hii(1-204)-C
Length = 213
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 270 ESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSL 306
E G +DPRT+ ++E Y R+ EF + + W++L
Sbjct: 165 EIGSGYPSDPRTRAFLENYYREHGEFPPIVRKGWKTL 201
>pdb|3JWI|A Chain A, Crystal Structure Analysis Of The Methyltransferase Domain
Of Bacterial-Cthen1-Cn
pdb|3JWI|B Chain B, Crystal Structure Analysis Of The Methyltransferase Domain
Of Bacterial-Cthen1-Cn
Length = 207
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 13/74 (17%)
Query: 208 IYNYSRIPYYDA--------HYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFDNLYY 259
+Y R YDA H + +A +K ++ + T+ V +PNK N +Y
Sbjct: 92 VYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIV----STPNKEYNFHY 147
Query: 260 QNLPKGLGLLESDH 273
QNL +G L DH
Sbjct: 148 QNLFEG-NLRHRDH 160
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase
Length = 338
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 138 GGPYYNVYLGRKDVRVSKAADVEGNLPKPTMPMSQIIDVFAKRKFSVQEMVALSGAHTIG 197
GGP GR ++ +G +P PT +I+ A FS E+V L +H+I
Sbjct: 123 GGPRLQFLAGRSNISQPSP---DGLVPDPTDSADKILARMADIGFSPTEVVHLLASHSIA 179
Query: 198 --FSHCNEFSGNIYNYSRIPYYDAHYNPRFAEALQKACADYQKNPTLSVFNDIMSPNKFD 255
+ + +G+ ++ S +D + F E+L V + I P +F
Sbjct: 180 AQYEVDTDVAGSPFD-STPSVFDTQF---FVESLLHGTQFTGSGQGGEVMSPI--PGEFR 233
Query: 256 NLYYQNLPKGLGLLESDHGLFNDPRT 281
L+SD L DPRT
Sbjct: 234 -------------LQSDFALSRDPRT 246
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 257 LYYQNLPKGLGLLESDHGLFNDPRTKPYVELYARDQNEFFKALLELW 303
LY+ +LP+ L D G + + T Y YAR E F L++LW
Sbjct: 126 LYHWDLPQAL----QDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLW 168
>pdb|2DFE|A Chain A, Crystal Structure Of Tk-Rnase Hii(1-200)-C
Length = 209
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 270 ESDHGLFNDPRTKPYVELYARDQNEFFKALLELWRSLVFMV 310
E G +DPRT+ ++E Y R+ EF + + W++ M+
Sbjct: 165 EIGSGYPSDPRTRAFLENYYREHGEFPPIVRKGWKTTQDMI 205
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,005,347
Number of Sequences: 62578
Number of extensions: 407772
Number of successful extensions: 1170
Number of sequences better than 100.0: 128
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 920
Number of HSP's gapped (non-prelim): 201
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)