BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039893
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96386|MT3_CARPA Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1
Length = 65
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 2/66 (3%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++ VVMD AAE +G CKCGP+C+C
Sbjct: 1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSC 58
Query: 61 VNCTCG 66
NCTCG
Sbjct: 59 TNCTCG 64
>sp|Q40256|MT3_MUSAC Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1
Length = 65
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 4 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNC 63
TCGNCDC D+SQCVKKG+SY D VET+ S+V V+V +AAE +G CKCG CAC +C
Sbjct: 3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDC 61
Query: 64 TCGS 67
CG+
Sbjct: 62 KCGN 65
>sp|P43389|MT3_ACTDE Metallothionein-like protein type 3 OS=Actinidia deliciosa
GN=pKIWI503 PE=2 SV=1
Length = 63
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MSD CGNCDCAD SQCVKKG+S D VETD S++ VV M V AAE+ G CKCG +C C
Sbjct: 1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPC 57
Query: 61 VNCTC 65
VNCTC
Sbjct: 58 VNCTC 62
>sp|O48951|MT3_PRUAV Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1
Length = 64
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MS C NCDC+D SQC KKG S+ VET+ + TV+ MD AAE GNCKCGP+CAC
Sbjct: 1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCAC 59
Query: 61 VNCTC 65
V+C C
Sbjct: 60 VDCKC 64
>sp|O24059|MT3_MALDO Metallothionein-like protein type 3 OS=Malus domestica GN=MT2
PE=3 SV=1
Length = 66
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MS C NCDCAD +QCVKKG+SY VET+ + TV V D AAE +G CKCG C+C
Sbjct: 1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSC 59
Query: 61 VNCTCG 66
V+CTCG
Sbjct: 60 VSCTCG 65
>sp|A1YTM8|MT3A_ORYSJ Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica
GN=MT3A PE=2 SV=1
Length = 62
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MSD CGNCDCAD+SQCVKKG+SY VE + S +V A E G CKCG +C+C
Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSC 55
Query: 61 VNCTCG 66
+C CG
Sbjct: 56 TDCKCG 61
>sp|A2WLS0|MT3A_ORYSI Metallothionein-like protein 3A OS=Oryza sativa subsp. indica
GN=MT3A PE=3 SV=1
Length = 62
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MSD CGNCDCAD+SQCVKKG+SY VE + S +V A E G CKCG +C+C
Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSC 55
Query: 61 VNCTCG 66
+C CG
Sbjct: 56 TDCKCG 61
>sp|A3B0Y1|MT3B_ORYSJ Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica
GN=MT3B PE=2 SV=1
Length = 65
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MSD CGNCDCAD+SQCVKKG+SY V+ + S + +V E +G CKC C+C
Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSC 58
Query: 61 VNCTCGS 67
C CG
Sbjct: 59 AGCNCGK 65
>sp|A2Y1D7|MT3B_ORYSI Metallothionein-like protein 3B OS=Oryza sativa subsp. indica
GN=MT3B PE=3 SV=1
Length = 65
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MSD CG+CDCAD+SQCVKKG+SY V+ + S + +V E +G CKC C+C
Sbjct: 1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSC 58
Query: 61 VNCTCGS 67
C CG
Sbjct: 59 AGCNCGK 65
>sp|Q40854|MT3_PICGL Metallothionein-like protein EMB30 OS=Picea glauca GN=EMB30 PE=3
SV=1
Length = 60
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 1 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCAC 60
MS CGNCDCAD+SQC KKG VET V E +CKCGP C C
Sbjct: 1 MSSDCGNCDCADKSQCTKKGFQIDG-IVETSYEMGHGGDV------SLENDCKCGPNCQC 53
Query: 61 VNCTC 65
CTC
Sbjct: 54 GTCTC 58
>sp|Q41670|MT1B_VICFA Metallothionein-like protein 1B OS=Vicia faba GN=MT1B PE=3 SV=1
Length = 75
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 8 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQA-------AEAEGNCKCGPTCAC 60
C+C D +C K+ S + VET + + V +Q A EG CKCG C C
Sbjct: 10 CNCGDSCKCNKRSSGLSYSEVETKETVILGVGPAKIQFEGAEMSFASKEGGCKCGDNCTC 69
Query: 61 VNCTC 65
C C
Sbjct: 70 DPCNC 74
>sp|P20830|MT1_PEA Metallothionein-like protein 1 OS=Pisum sativum GN=MTA PE=3 SV=1
Length = 75
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 7 NCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQ-------AAEAEGNCKCGPTCA 59
+C+C D +C K+ S + +ET + + V +Q AA +G CKCG C
Sbjct: 9 SCNCGDSCKCNKRSSGLSYSEMETTETVILGVGPAKIQFEGAEMSAASEDGGCKCGDNCT 68
Query: 60 CVNCTC 65
C C C
Sbjct: 69 CDPCNC 74
>sp|Q39458|MT1_CICAR Metallothionein-like protein 1 OS=Cicer arietinum PE=3 SV=1
Length = 75
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 7 NCDCADRSQCVKK-GSSY--AADFVETDLSFVSTVVVM----DVQAAEAEGNCKCGPTCA 59
+C+C D+ +C K+ G SY A + ET + V + ++ A +G CKCG +C
Sbjct: 9 SCNCGDQCKCNKRSGLSYVEAGETTETVVLGVGPTKIHFEGAEMSVAAEDGGCKCGSSCT 68
Query: 60 CVNCTC 65
C C C
Sbjct: 69 CDPCNC 74
>sp|Q41669|MT1A_VICFA Metallothionein-like protein 1A OS=Vicia faba GN=MT1A PE=3 SV=1
Length = 77
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
Query: 7 NCDCADRSQCVKKGSSYAADFVETD-------LSFVSTVVVMD---VQAAEAEGNCKCGP 56
+C+C D +C K+ S + +ET L F + D + A E CKCG
Sbjct: 9 SCNCGDSCKCNKRSSGLSYSEMETKETKETVVLGFGPAKIHFDGAEMSVASKEEGCKCGD 68
Query: 57 TCACVNCTC 65
C C C C
Sbjct: 69 KCTCDPCNC 77
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.129 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,374,011
Number of Sequences: 539616
Number of extensions: 573214
Number of successful extensions: 2033
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1841
Number of HSP's gapped (non-prelim): 156
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)