BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039894
MIFTKTLLILLLAIILVLHNVVSATTTVVHVEEENQNHDADHYEEDQDHDSFEDQSISSG
RSLLQKKRTSYKTLRLTCDKFPRICYFEGSPGSSCCKKKCVELLKDRMNCGKCGKKCKYN
EICCNGKCVNPSFNRRHCGGCNNSCSNGEFCVLGLCNYA

High Scoring Gene Products

Symbol, full name Information P value
AT1G11925 protein from Arabidopsis thaliana 2.0e-24
AT4G26880 protein from Arabidopsis thaliana 1.2e-17
AT1G50720 protein from Arabidopsis thaliana 1.6e-17
AT5G55110 protein from Arabidopsis thaliana 4.7e-16
GRI
GRIM REAPER
protein from Arabidopsis thaliana 4.9e-14
AT1G50650 protein from Arabidopsis thaliana 6.6e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039894
        (159 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956323 - symbol:AT1G11925 "AT1G11925" speci...   279  2.0e-24   1
TAIR|locus:2116407 - symbol:AT4G26880 "AT4G26880" species...   215  1.2e-17   1
TAIR|locus:2015863 - symbol:AT1G50720 "AT1G50720" species...   214  1.6e-17   1
TAIR|locus:2161605 - symbol:AT5G55110 "AT5G55110" species...   200  4.7e-16   1
TAIR|locus:2037037 - symbol:GRI "GRIM REAPER" species:370...   181  4.9e-14   1
TAIR|locus:2008006 - symbol:AT1G50650 "AT1G50650" species...   142  6.6e-10   1


>TAIR|locus:504956323 [details] [associations]
            symbol:AT1G11925 "AT1G11925" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC002131
            EMBL:DQ912187 IPI:IPI00543839 PIR:A86254 RefSeq:NP_683300.2
            UniGene:At.65902 STRING:O65387 EnsemblPlants:AT1G11925.1
            GeneID:837743 KEGG:ath:AT1G11925 TAIR:At1g11925 OMA:KGRSCAY
            PhylomeDB:O65387 ProtClustDB:CLSN2920586 Genevestigator:O65387
            InterPro:IPR006969 Pfam:PF04885 Uniprot:O65387
        Length = 140

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 43/84 (51%), Positives = 57/84 (67%)

Query:    76 LTCDKFPRICYFEGSPGSSCCKKKCVELLKDRMNXXXXXXXXXYNEICCNGKCVNPSFNR 135
             LTCDK  ++C  +GSPG +CC+KKCV+L  +++N         Y+E+CCNG CVNP F+R
Sbjct:    57 LTCDKSSKVCRLKGSPGRNCCRKKCVDLRTNKLNCGRCGKSCQYSEVCCNGYCVNPMFDR 116

Query:   136 RHCGGCNNSCSNGEFCVLGLCNYA 159
             RHCGGC   C  G  C  G+C+YA
Sbjct:   117 RHCGGCFKKCKKGRSCAYGMCSYA 140


>TAIR|locus:2116407 [details] [associations]
            symbol:AT4G26880 "AT4G26880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161566 EMBL:AL035440
            InterPro:IPR006969 Pfam:PF04885 HOGENOM:HOG000237715
            ProtClustDB:CLSN2686054 IPI:IPI00542746 PIR:T04811
            RefSeq:NP_194418.1 UniGene:At.65424 STRING:Q9SZ28
            EnsemblPlants:AT4G26880.1 GeneID:828795 KEGG:ath:AT4G26880
            TAIR:At4g26880 eggNOG:NOG277916 InParanoid:Q9SZ28 OMA:TIREYTS
            PhylomeDB:Q9SZ28 ArrayExpress:Q9SZ28 Genevestigator:Q9SZ28
            Uniprot:Q9SZ28
        Length = 152

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 43/121 (35%), Positives = 65/121 (53%)

Query:    47 QDHDSFEDQSISSGRS--LLQKKRTSYKTLRLT--CDKFPRICYFEGSPGSS----CCKK 98
             +++ SF+  S  + R   LL +K    +       C++ P IC   G  GS+    CC  
Sbjct:    32 REYTSFDAPSTPTIRPNRLLAQKEVGERNPNAADHCNRNPEICTPYGGGGSNSTMTCCNN 91

Query:    99 KCVELLKDRMNXXXXXXXXXYNEICCNGKCVNPSFNRRHCGGCNNSCSNGEFCVLGLCNY 158
             KC+++  D  N         +++ CC G+CV  ++++RHCG CN+ C  GEFCV GLCNY
Sbjct:    92 KCIDVSSDDNNCGACKNKCKFSQTCCRGQCVYVAYDKRHCGQCNHPCELGEFCVYGLCNY 151

Query:   159 A 159
             A
Sbjct:   152 A 152


>TAIR|locus:2015863 [details] [associations]
            symbol:AT1G50720 "AT1G50720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 InterPro:IPR006969
            Pfam:PF04885 EMBL:AC079027 EMBL:DQ056490 IPI:IPI00541294 PIR:A96544
            RefSeq:NP_175487.1 UniGene:At.62376 STRING:Q9C6T5
            EnsemblPlants:AT1G50720.1 GeneID:841494 KEGG:ath:AT1G50720
            TAIR:At1g50720 HOGENOM:HOG000237715 InParanoid:Q9C6T5 OMA:MAKATIL
            PhylomeDB:Q9C6T5 ProtClustDB:CLSN2686054 ArrayExpress:Q9C6T5
            Genevestigator:Q9C6T5 Uniprot:Q9C6T5
        Length = 154

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 38/84 (45%), Positives = 50/84 (59%)

Query:    78 CDKFPRICYFEGSPGSS--CCKKKCVELLKDRMNXXXXXXXXXYNEICCNGKCVNPSFNR 135
             C+K   IC  +G   S+  CC  KCV+L  D  N         + + CC G+CV  ++++
Sbjct:    71 CNKEEEICKSQGMYNSTMACCSNKCVDLAYDNDNCGACKNQCKFTQTCCRGECVYLAYDK 130

Query:   136 RHCGGCNNSCSNGEFCVLGLCNYA 159
             RHCG CN+SC  GEFCV GLCNYA
Sbjct:   131 RHCGECNHSCLVGEFCVYGLCNYA 154


>TAIR|locus:2161605 [details] [associations]
            symbol:AT5G55110 "AT5G55110" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB010071 InterPro:IPR006969
            Pfam:PF04885 HOGENOM:HOG000237715 ProtClustDB:CLSN2686054
            IPI:IPI00537676 RefSeq:NP_200322.1 UniGene:At.55560 STRING:Q9FLQ0
            PRIDE:Q9FLQ0 EnsemblPlants:AT5G55110.1 GeneID:835602
            KEGG:ath:AT5G55110 TAIR:At5g55110 eggNOG:NOG290349
            InParanoid:Q9FLQ0 OMA:ANATMAC PhylomeDB:Q9FLQ0
            Genevestigator:Q9FLQ0 Uniprot:Q9FLQ0
        Length = 163

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 36/87 (41%), Positives = 50/87 (57%)

Query:    78 CDKFPRIC----YFEGSPGS-SCCKKKCVELLKDRMNXXXXXXXXXYNEICCNGKCVNPS 132
             C+K   IC    Y  G+  + +CC  KC++L  D  N         + + CC G+CV  +
Sbjct:    77 CNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKNKCKFGQTCCRGQCVYVA 136

Query:   133 FNRRHCGGCNNSCSNGEFCVLGLCNYA 159
             +++RHCG CN+ C  GEFCV GLCNYA
Sbjct:   137 YDKRHCGECNHRCDLGEFCVYGLCNYA 163


>TAIR|locus:2037037 [details] [associations]
            symbol:GRI "GRIM REAPER" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0005615 "extracellular space" evidence=IDA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=IMP]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=IMP] [GO:0010193 "response to ozone" evidence=IMP]
            [GO:0010942 "positive regulation of cell death" evidence=IMP]
            [GO:0042742 "defense response to bacterium" evidence=IMP]
            [GO:0048316 "seed development" evidence=IMP] [GO:0080141
            "regulation of jasmonic acid biosynthetic process" evidence=IMP]
            [GO:0080142 "regulation of salicylic acid biosynthetic process"
            evidence=IMP] EMBL:CP002684 GO:GO:0005615 GO:GO:0042742
            GO:GO:0010193 GO:GO:0048316 GO:GO:0010942 EMBL:AC022520
            GO:GO:0009867 GO:GO:0009863 GO:GO:0080141 GO:GO:0080142
            InterPro:IPR006969 Pfam:PF04885 UniGene:At.16238 UniGene:At.66953
            EMBL:AK176040 IPI:IPI00525247 PIR:H96571 RefSeq:NP_175721.1
            STRING:Q9LNN7 PRIDE:Q9LNN7 EnsemblPlants:AT1G53130.1 GeneID:841747
            KEGG:ath:AT1G53130 TAIR:At1g53130 HOGENOM:HOG000153056
            InParanoid:Q9LNN7 OMA:NCGRCGH PhylomeDB:Q9LNN7
            ProtClustDB:CLSN2914308 Genevestigator:Q9LNN7 Uniprot:Q9LNN7
        Length = 168

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 44/142 (30%), Positives = 67/142 (47%)

Query:    23 SATTTVVHVEEENQNHDADHYEEDQDHDSFEDQSISSG-RSLLQKKRTSYKTLRLTCDKF 81
             S + +V+  E  +Q  D ++Y  D+      + +ISS  R L+   +   K +R   + +
Sbjct:    28 SKSNSVLADEVVDQEDDPEYYILDETPSILSNVTISSKTRLLVSHYKKIKKGMRCHVESY 87

Query:    82 PRICY-FEGSPGSS---CCKKKCVELLKDRMNXXXXXXXXXYNEICCNGKCVNPSFNRRH 137
               IC   + + G+S   CCKK C  +L DR N         + + CC G C   +FN  H
Sbjct:    88 -NICNGVKANKGTSLLHCCKKHCRNVLGDRNNCGRCGHKCGFGQRCCGGVCTYVNFNPNH 146

Query:   138 CGGCNNSCSNGEFCVLGLCNYA 159
             CG C   C++G  C  G C YA
Sbjct:   147 CGKCTRKCASGVKCEYGYCGYA 168


>TAIR|locus:2008006 [details] [associations]
            symbol:AT1G50650 "AT1G50650" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC079279 InterPro:IPR006969
            Pfam:PF04885 IPI:IPI00545061 PIR:B96543 RefSeq:NP_175480.1
            UniGene:At.65999 STRING:Q9C6P6 EnsemblPlants:AT1G50650.1
            GeneID:841487 KEGG:ath:AT1G50650 TAIR:At1g50650 eggNOG:NOG118106
            HOGENOM:HOG000152179 InParanoid:Q9C6P6 OMA:RMRCCRN PhylomeDB:Q9C6P6
            ProtClustDB:CLSN2682908 ArrayExpress:Q9C6P6 Genevestigator:Q9C6P6
            Uniprot:Q9C6P6
        Length = 174

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/81 (33%), Positives = 41/81 (50%)

Query:    82 PRICYFEGSPGSS---CCKKKCVELLKDRMNXXXXXXXXXYNEICCNGKCVNPSFNRRHC 138
             P IC   G P  +   CC+ +CV++L D  +         +   CC+G CV+ + +  +C
Sbjct:    59 PWICKRSG-PSEARMRCCRNQCVDVLSDPNHCRFCFKSCRFALSCCDGDCVDTNTDPSNC 117

Query:   139 GGCNNSCSNGEFCVLGLCNYA 159
             G C N C +G  C  G+C YA
Sbjct:   118 GQCGNECESGAPCEFGMCGYA 138


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      159       138   0.00091  102 3  11 22  0.42    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  158 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.39u 0.12s 18.51t   Elapsed:  00:00:01
  Total cpu time:  18.39u 0.12s 18.51t   Elapsed:  00:00:01
  Start:  Thu May  9 16:42:00 2013   End:  Thu May  9 16:42:01 2013

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