Query 039894
Match_columns 159
No_of_seqs 143 out of 216
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 04:22:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039894.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039894hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jlza_ g.3.7.2 (A:) alpha-KTX 75.4 0.13 9.7E-06 28.2 -1.3 20 138-157 2-21 (26)
2 d1axha_ g.3.6.2 (A:) Atracotox 56.5 1.3 9.3E-05 26.0 0.3 17 114-130 8-24 (37)
3 d1bx7a_ g.3.15.1 (A:) Hirustas 38.7 9.3 0.00068 23.5 2.3 34 109-150 3-36 (51)
4 d1dura_ d.58.1.1 (A:) Ferredox 32.4 5.2 0.00038 23.7 0.3 39 108-149 9-50 (55)
5 d1shyb2 g.16.2.1 (B:516-564) H 32.2 4 0.00029 24.8 -0.2 18 106-123 19-36 (49)
6 d1hfel2 d.58.1.5 (L:2-86) Fe-o 30.8 7.3 0.00053 24.8 0.9 41 109-149 36-79 (85)
7 d1ejab_ g.3.15.1 (B:) Bdellast 28.2 12 0.00088 23.1 1.6 30 115-150 7-36 (53)
8 d2fdna_ d.58.1.1 (A:) Ferredox 27.2 8.1 0.00059 22.7 0.6 40 108-149 9-51 (55)
9 d2axtl1 f.23.31.1 (L:1-37) Pho 25.9 23 0.0017 20.4 2.4 15 3-17 18-32 (37)
10 d2pila_ d.24.1.1 (A:) Pilin Gc 25.0 21 0.0016 22.6 2.5 17 3-19 1-17 (158)
11 d3cx5d2 f.23.11.1 (D:261-307) 20.0 35 0.0026 20.3 2.6 15 6-20 11-25 (47)
No 1
>d1jlza_ g.3.7.2 (A:) alpha-KTX, K+-channel blocker {Scorpion (Tityus cambridgei) [TaxId: 184226]}
Probab=75.45 E-value=0.13 Score=28.18 Aligned_cols=20 Identities=35% Similarity=1.129 Sum_probs=14.2
Q ss_pred CcccCCCCCCCCccCCceec
Q 039894 138 CGGCNNSCSNGEFCVLGLCN 157 (159)
Q Consensus 138 CG~Cg~~C~~G~~C~~G~C~ 157 (159)
||+|-++|.....|..|.|-
T Consensus 2 cgscrkkckgsgkcingrck 21 (26)
T d1jlza_ 2 CGSCRKKCKGSGKCINGRCK 21 (26)
T ss_dssp CSSHHHHTTSSEEEETTEEE
T ss_pred ccchhhhcCCCCceECCcee
Confidence 67777777766677777763
No 2
>d1axha_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=56.52 E-value=1.3 Score=25.98 Aligned_cols=17 Identities=47% Similarity=1.218 Sum_probs=10.8
Q ss_pred CCCCCCCCcccCCcccC
Q 039894 114 GKKCKYNEICCNGKCVN 130 (159)
Q Consensus 114 g~~C~~g~~CC~G~Cvd 130 (159)
|..|++.+.||.|.|..
T Consensus 8 gqpcpyne~ccsgsct~ 24 (37)
T d1axha_ 8 GQPCPYNENCCSQSCTF 24 (37)
T ss_dssp TSBCSSGGGBSSSCEEE
T ss_pred CCcCCCcccccccccee
Confidence 45666666677766654
No 3
>d1bx7a_ g.3.15.1 (A:) Hirustasin {Medicinal leech (Hirudo medicinalis) [TaxId: 6421]}
Probab=38.66 E-value=9.3 Score=23.50 Aligned_cols=34 Identities=32% Similarity=0.789 Sum_probs=23.4
Q ss_pred cccccCCCCCCCCcccCCcccCCCcCCCCCcccCCCCCCCCc
Q 039894 109 NCGKCGKKCKYNEICCNGKCVNPSFNRRHCGGCNNSCSNGEF 150 (159)
Q Consensus 109 NCG~Cg~~C~~g~~CC~G~Cvdl~tD~~nCG~Cg~~C~~G~~ 150 (159)
.||. ..|+..|+|-.|.||-.. +.|-..|+.|-.
T Consensus 3 ~CG~--~TCS~AQvC~~~kCVC~~------~~C~i~C~~GfK 36 (51)
T d1bx7a_ 3 TCGG--ETCSAAQVCLKGKCVCNE------VHCRIRCKYGLK 36 (51)
T ss_dssp CBTT--BCCCTTEEEETTEEEECC------CCCCCCCTTCBC
T ss_pred ccCC--cccCHHHEEecCCEEEEe------eeEEEeCCCCcc
Confidence 4665 788888888888887543 356677777643
No 4
>d1dura_ d.58.1.1 (A:) Ferredoxin II {Peptostreptococcus asaccharolyticus [TaxId: 1258]}
Probab=32.41 E-value=5.2 Score=23.72 Aligned_cols=39 Identities=28% Similarity=0.706 Sum_probs=21.7
Q ss_pred CcccccCCCCCCCCcccCCcccCCCcCC---CCCcccCCCCCCCC
Q 039894 108 MNCGKCGKKCKYNEICCNGKCVNPSFNR---RHCGGCNNSCSNGE 149 (159)
Q Consensus 108 ~NCG~Cg~~C~~g~~CC~G~Cvdl~tD~---~nCG~Cg~~C~~G~ 149 (159)
.+||.|-.+|+.+..=-++ ....|+ ..||.|-.+||.+.
T Consensus 9 ~~C~~C~~~CP~~ai~~~~---~~~i~~~~C~~Cg~C~~~CP~~A 50 (55)
T d1dura_ 9 IACGACKPECPVNCIQEGS---IYAIDADSCIDCGSCASVCPVGA 50 (55)
T ss_dssp CCCCCSGGGCTTCCEECSS---SCEECTTTCCCCCHHHHHCTTCC
T ss_pred cChhHHHhhCCcCeEeCCc---eeEEChhHCcCCCChhhhCCcCc
Confidence 3577777777775321111 112232 35777778888763
No 5
>d1shyb2 g.16.2.1 (B:516-564) Hepatocyte growth factor receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.21 E-value=4 Score=24.76 Aligned_cols=18 Identities=39% Similarity=0.890 Sum_probs=8.8
Q ss_pred ccCcccccCCCCCCCCcc
Q 039894 106 DRMNCGKCGKKCKYNEIC 123 (159)
Q Consensus 106 D~~NCG~Cg~~C~~g~~C 123 (159)
|+++||=|+++|..++.|
T Consensus 19 ~~y~CgWC~~rCs~~~~c 36 (49)
T d1shyb2 19 PFVQCGWCHDKCVRSEEC 36 (49)
T ss_dssp GGGCCEEETTEEECGGGC
T ss_pred CCCcCcCcCCCccCcccc
Confidence 444555555555444433
No 6
>d1hfel2 d.58.1.5 (L:2-86) Fe-only hydrogenase larger subunit, N-domain {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=30.81 E-value=7.3 Score=24.80 Aligned_cols=41 Identities=20% Similarity=0.470 Sum_probs=20.5
Q ss_pred cccccCCCCCCCCcccCCcccCCCcC---CCCCcccCCCCCCCC
Q 039894 109 NCGKCGKKCKYNEICCNGKCVNPSFN---RRHCGGCNNSCSNGE 149 (159)
Q Consensus 109 NCG~Cg~~C~~g~~CC~G~Cvdl~tD---~~nCG~Cg~~C~~G~ 149 (159)
+||.|-.+|+.+..=-...=.-...| =-+||.|-.+||.|.
T Consensus 36 ~C~~Cv~~Cp~~ai~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~A 79 (85)
T d1hfel2 36 GCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPENA 79 (85)
T ss_dssp CCCHHHHHCTTCCCBCCTTSCCBCCCGGGCCCCCTTGGGCTTCC
T ss_pred CchhHHHHCCccCEEeecCCceEeCChhHCCCcChhhhhCCccc
Confidence 67777777765421100000001112 246788888888763
No 7
>d1ejab_ g.3.15.1 (B:) Bdellastasin {Medicinal leech (Hirudo medicinalis) [TaxId: 6421]}
Probab=28.18 E-value=12 Score=23.11 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=21.1
Q ss_pred CCCCCCCcccCCcccCCCcCCCCCcccCCCCCCCCc
Q 039894 115 KKCKYNEICCNGKCVNPSFNRRHCGGCNNSCSNGEF 150 (159)
Q Consensus 115 ~~C~~g~~CC~G~Cvdl~tD~~nCG~Cg~~C~~G~~ 150 (159)
..|+..|+|-.|.||-.. +.|-..|+.|-.
T Consensus 7 ~TCS~AQvC~~~kCVC~~------~~C~i~C~~GfK 36 (53)
T d1ejab_ 7 VTCSGAQMCEVDKCVCSD------LHCKVKCEHGFK 36 (53)
T ss_dssp EEECTTCEEETTEEECCC------EEESCCCTTCBC
T ss_pred cccCHHHEEecCCEEEEe------eeEEEecCCCcc
Confidence 678888888888887543 456777777643
No 8
>d2fdna_ d.58.1.1 (A:) Ferredoxin II {Clostridium acidurici [TaxId: 1556]}
Probab=27.17 E-value=8.1 Score=22.72 Aligned_cols=40 Identities=25% Similarity=0.725 Sum_probs=21.9
Q ss_pred CcccccCCCCCCCCcccCCcccCCCcCC---CCCcccCCCCCCCC
Q 039894 108 MNCGKCGKKCKYNEICCNGKCVNPSFNR---RHCGGCNNSCSNGE 149 (159)
Q Consensus 108 ~NCG~Cg~~C~~g~~CC~G~Cvdl~tD~---~nCG~Cg~~C~~G~ 149 (159)
.+||.|-++|+.+..=-... ....|+ ..||.|-.+||.+.
T Consensus 9 ~~Cg~C~~~Cp~~ai~~~~~--~~~i~~~~C~~Cg~C~~~CP~~A 51 (55)
T d2fdna_ 9 ISCGACEPECPVNAISSGDD--RYVIDADTCIDCGACAGVCPVDA 51 (55)
T ss_dssp CCCCTTGGGCTTCCEECCSS--SCEECTTTCCCCCHHHHTCTTCC
T ss_pred CChhhHHHhcCccceEcCCc--eEEECHHHCCCCCChhcccCCCC
Confidence 35778888887643211110 112233 35788888888763
No 9
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=25.86 E-value=23 Score=20.35 Aligned_cols=15 Identities=40% Similarity=0.715 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHH
Q 039894 3 FTKTLLILLLAIILV 17 (159)
Q Consensus 3 ~~~~~~i~~la~~~~ 17 (159)
|.-+++||++|++..
T Consensus 18 y~GlLlifvl~vLFs 32 (37)
T d2axtl1 18 YLGLLLILVLALLFS 32 (37)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 455677777777654
No 10
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=25.03 E-value=21 Score=22.60 Aligned_cols=17 Identities=35% Similarity=0.575 Sum_probs=7.0
Q ss_pred hHHHHHHHHHHHHHHHH
Q 039894 3 FTKTLLILLLAIILVLH 19 (159)
Q Consensus 3 ~~~~~~i~~la~~~~l~ 19 (159)
|+-.=++++|||+-.|+
T Consensus 1 FTLIELlVViaIIgILa 17 (158)
T d2pila_ 1 FTLIELMIVIAIVGILA 17 (158)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHH
Confidence 33333444444444333
No 11
>d3cx5d2 f.23.11.1 (D:261-307) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.01 E-value=35 Score=20.33 Aligned_cols=15 Identities=13% Similarity=0.288 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHH
Q 039894 6 TLLILLLAIILVLHN 20 (159)
Q Consensus 6 ~~~i~~la~~~~l~~ 20 (159)
+|.|+++.++++++.
T Consensus 11 ~K~~~i~s~l~~~~~ 25 (47)
T d3cx5d2 11 LKTVIILSSLYLLSI 25 (47)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 456666666666654
Done!