Citrus Sinensis ID: 039895

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
Protein Sequence
MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHcccccEEHHHHHHHccccccccccccHHHHHHHHccccccccccEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccHccccccccccEEEEEEcccccEEEEEEccccccHcHHHHHHHHHHHEEEEEEEcccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHEEcccccccEEccccHEEEccccccEEEEEEEEEEccccccHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccHHHHccHHHcccccccccccHHHHHHHHHHHHHHccccHcccccHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIAssngkhnpirsfsadelktatddfdggkVIMKCLFYKLYKgflqdrpisvmkfedtfpfsvsKLKIAIEIASAVAYLHVgfsrpvvsrdikpttiVLQEENVAQLFDFTlslsipegethindsnrvigtfgfmapeyrttgdfseksdvYSFGALLLELLTGkkisysshfddgedyRLQDLVKKYIEnesfkeivdpaivgeeglmwpekEQQLLICTELAFKclsesegdrpTIVQVAKQLRQIYQSN
Flexible Loop (DISEMBL)
mgsclrsrkslekaekrkfmlgnGKILLEKLIAssngkhnpirsfsadeLKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISysshfddgedYRLQDLVKKYIenesfkeivDPAIVGEEGLMWPEKEQQLLICTELAFKCLSesegdrptIVQVAKQLRQIYQSN
Low Complexity Region (SEG)
MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN
Disordered region (IsUnstruct)
******************FMLGNGKILLEKLIA*****************KTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSE******TIVQV***********
Disordered Region (DISOPRED)
*GS*******************NGKILLEKLIA*****HNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKIS**********YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY***
Disordered Region (DISEMBL)
**********LEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN
Disordered Region (DISPRO)
*GSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	284	2.2.26 [Sep-21-2011]
Q9SA25	720	Wall-associated receptor	no	no	0.940	0.370	0.302	1e-28
O80795	372	Probable inactive recepto	no	no	0.908	0.693	0.290	2e-28
O64798	389	Inactive serine/threonine	no	no	0.852	0.622	0.316	4e-27
Q9LIG2	899	Receptor-like protein kin	no	no	0.602	0.190	0.393	3e-26
O64556	877	Putative leucine-rich rep	no	no	0.651	0.210	0.363	4e-26
Q9FZB1	872	Probable LRR receptor-lik	no	no	0.609	0.198	0.370	4e-26
Q7X8C5	748	Wall-associated receptor	no	no	0.630	0.239	0.391	5e-26
Q9SRH7	490	Receptor-like serine/thre	no	no	0.637	0.369	0.364	8e-26
Q9LFP7	493	Probable receptor-like pr	no	no	0.637	0.367	0.359	8e-26
C0LGQ7	898	Probable LRR receptor-lik	no	no	0.609	0.192	0.376	2e-25

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score =  126 bits (317), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 160/337 (47%), Gaps = 70/337 (20%)

Query: 4   CLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVI 63
           C  +RK     +KRKF   NG +LL++  +  +G  N  + FS+++L+ ATD F+  +++
Sbjct: 337 CKANRKRKVAKQKRKFFQRNGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRIL 396

Query: 64  MKCLFYKLYKGFLQDR-------------------------------------------- 79
            +     +YKG L+D                                             
Sbjct: 397 GQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLET 456

Query: 80  --PISVMKF-------------EDTFPFSVS-KLKIAIEIASAVAYLHVGFSRPVVSRDI 123
             PI V +F              + FP S   +L IA E+A A++YLH   S P+  RD+
Sbjct: 457 EVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDV 516

Query: 124 KPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDV 183
           K T I+L E++ A++ DF +S S+   +TH+  +  V GT G++ PEY  +  F+ KSDV
Sbjct: 517 KSTNILLDEKHRAKVSDFGISRSVAIDDTHL--TTIVQGTIGYVDPEYLQSNHFTGKSDV 574

Query: 184 YSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWP 243
           YSFG LL+ELLTG+K    S     E   L     + + N+   EI+D A + EE     
Sbjct: 575 YSFGVLLIELLTGEKP--VSLLRRQEVRMLGAYFLEAMRNDRLHEILD-ARIKEEC---- 627

Query: 244 EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI 280
              +++L   +LA +CLS +   RPT+  V  +L ++
Sbjct: 628 -DREEVLAVAKLARRCLSLNSEHRPTMRDVFIELDRM 663

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|O80795|Y1652_ARATH Probable inactive receptor-like protein kinase At1g65250 OS=Arabidopsis thaliana GN=At1g65250 PE=2 SV=1

 Score =  126 bits (316), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 157/327 (48%), Gaps = 69/327 (21%)

Query: 24  GKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKC-LFYKLYKGFLQDRPIS 82
           G  LLE+LI   +GK NPI+ FSADE+  AT+DF     +++  + +K Y G  ++ P+ 
Sbjct: 19  GAKLLEELIECCDGKSNPIKFFSADEILKATNDFSDSNFVLRLEVPFKWYSGKNENHPMI 78

Query: 83  VMK-------------------------------------FEDTFPFSV----------- 94
           ++K                                      E  +P  V           
Sbjct: 79  LIKKDVGWWSGLRVDRLCRDIAVSSMVSGHKNFMKLVGCCLELDYPVMVYHSVKKHYKLE 138

Query: 95  -------SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI 147
                   ++KIA +IA+A+AYLH  F RP V R +    I+L E+ VA+L DF+  +SI
Sbjct: 139 ISEQPWKKRMKIAEDIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSI 198

Query: 148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF-- 205
           PEGET +   +R +G + + A  Y  +G  S+K+DV++FG  +   L      Y  H+  
Sbjct: 199 PEGETFVR-VDRDVGLYSYFADNYVRSGLVSDKTDVFAFGIFMGHRLLLGYEYYFEHYRG 257

Query: 206 -----DDGEDYRL----QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELA 256
                +DG D  +    ++L+    E+   +EI D  ++ + G +  ++  Q+    +L+
Sbjct: 258 EEEESEDGFDSLMKRHARNLLSTLKEDRPMEEIADSKMIEKMGQISEQERCQMKAFLKLS 317

Query: 257 FKCLSESEGDRPTIVQVAKQLRQIYQS 283
            +C   SE + PT+V+VAK+L +I +S
Sbjct: 318 LRCTGPSE-EVPTMVEVAKELNKIQRS 343

Arabidopsis thaliana (taxid: 3702)

>sp|O64798|Y1747_ARATH Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1

 Score =  121 bits (304), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 148/316 (46%), Gaps = 74/316 (23%)

Query: 24  GKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLF---YKLYKG------ 74
           G  LL+ LI   +GK NPI+ FSADE++ AT++F    ++ +      YK Y G      
Sbjct: 19  GAKLLKDLIECCDGKSNPIKFFSADEIRKATNNFGVSNLVSELSHDFDYKWYSGKNENHD 78

Query: 75  -----------------FLQDRPISVM---------------KFEDTFPFSV-------- 94
                            F +D  +S M               +FE+  P  V        
Sbjct: 79  MILVRKAFSQSVYYKDTFFRDIAVSSMVSGHKNFLKLIGYCLEFEE--PVMVYHGVKKHY 136

Query: 95  ----------SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS 144
                      ++KIA +IA+A+AYLH  F RP V R +  T I+L E+ VA+L DF+  
Sbjct: 137 HLESSEQPWKRRMKIAEDIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFC 196

Query: 145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
           +SIPEGET +   + + GT  ++ P Y   G  SE++DV++ G  +  LL G+KI     
Sbjct: 197 VSIPEGETFVQ-VDYIAGTVDYLKPNYLKHGVVSEETDVFAVGHSMQMLLMGEKI----- 250

Query: 205 FDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESE 264
           FD     R      K++E     EI DP    E G +  E+  Q+     L+ +C     
Sbjct: 251 FD--RIMRRPFPTSKFMEEPKMDEIADP----EMGEISEEELCQMKAFLLLSLRCTGHV- 303

Query: 265 GDRPTIVQVAKQLRQI 280
           G+ PT+V+VAK+L+ I
Sbjct: 304 GEVPTMVEVAKELKSI 319

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LIG2|RLK6_ARATH Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1

 Score =  119 bits (297), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 17/188 (9%)

Query: 95  SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP-EGETH 153
           ++LKI +E A  + YLH G   P+V RD+K T I+L E   A+L DF LS S P EGETH
Sbjct: 690 TRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETH 749

Query: 154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
           +  S  V GT G++ PEY  T   +EKSDVYSFG +LLE++T + +   S     E   +
Sbjct: 750 V--STVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSR----EKPHI 803

Query: 214 QDLVKKYIENESFKEIVDPAIVG--EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIV 271
            + V   +     + I+DP + G  + G +W           ELA  CL+ S   RPT+ 
Sbjct: 804 AEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWR--------AVELAMSCLNPSSARRPTMS 855

Query: 272 QVAKQLRQ 279
           QV  +L +
Sbjct: 856 QVVIELNE 863

Probable receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64556|Y2923_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Arabidopsis thaliana GN=At2g19230 PE=2 SV=3

 Score =  118 bits (296), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 24/209 (11%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           +L  +  S++ +E+       +L+I+++ A  + YLH G   P+V RD+KPT I++ E+ 
Sbjct: 652 YLSGKNSSILSWEE-------RLQISLDAAQGLEYLHNGCKPPIVHRDVKPTNILINEKL 704

Query: 135 VAQLFDFTLSLSIP-EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLEL 193
            A++ DF LS S   EG++ +  S  V GT G++ PE+ +   FSEKSDVYSFG +LLE+
Sbjct: 705 QAKIADFGLSRSFTLEGDSQV--STEVAGTIGYLDPEHYSMQQFSEKSDVYSFGVVLLEV 762

Query: 194 LTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE---GLMWPEKEQQLL 250
           +TG+ +   S  +  E+  + D V   +     K IVDP + GE    GL W        
Sbjct: 763 ITGQPVISRSRTE--ENRHISDRVSLMLSKGDIKSIVDPKL-GERFNAGLAWK------- 812

Query: 251 ICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
             TE+A  C SES   R T+ QV  +L++
Sbjct: 813 -ITEVALACASESTKTRLTMSQVVAELKE 840

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FZB1|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1

 Score =  118 bits (296), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 13/186 (6%)

Query: 95  SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP-EGETH 153
           ++++IA+E A  + YLH G + P+V RD+K T I+L E   A+L DF LS S P +GE+H
Sbjct: 663 NRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESH 722

Query: 154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
           +  S  V GT G++ PEY  T   SEKSDVYSFG +LLE++T + ++  +     E   +
Sbjct: 723 V--STVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTR----ERTHI 776

Query: 214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
            + V   +     K I+DP ++G+       K        ELA  C++ S   RPT+  V
Sbjct: 777 NEWVGSMLTKGDIKSILDPKLMGDYDTNGAWK------IVELALACVNPSSNRRPTMAHV 830

Query: 274 AKQLRQ 279
             +L +
Sbjct: 831 VTELNE 836

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 10/189 (5%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           +L IAIEIA A++YLH   S P+  RDIK T I+L E N A++ DF  S S+   +TH+ 
Sbjct: 515 RLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHL- 573

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
            + +V GTFG++ PEY  +  F+EKSDVYSFG +L+ELLTG+K   SS     E+  L  
Sbjct: 574 -TTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKP--SSRVRSEENRGLAA 630

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
              + ++     +IVD  I  E  +       Q++    LA +CL+     RP + +V+ 
Sbjct: 631 HFVEAVKENRVLDIVDDRIKDECNM------DQVMSVANLARRCLNRKGKKRPNMREVSI 684

Query: 276 QLRQIYQSN 284
           +L  I  S+
Sbjct: 685 ELEMIRSSH 693

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1

 Score =  117 bits (293), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 11/192 (5%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP- 148
            P+S+ ++KIA+  A  +++LH    +PV+ RD K + I+L  E  A+L DF L+   P 
Sbjct: 238 LPWSI-RMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDAPD 296

Query: 149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDG 208
           EG+TH+  S RV+GT+G+ APEY  TG  + KSDVYSFG +LLE+LTG++ S   +  +G
Sbjct: 297 EGKTHV--STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR-SMDKNRPNG 353

Query: 209 EDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP 268
           E   ++      ++   F  ++DP + G   +   +K       T+LA +CLS     RP
Sbjct: 354 EHNLVEWARPHLLDKRRFYRLLDPRLEGHFSVKGAQK------VTQLAAQCLSRDSKIRP 407

Query: 269 TIVQVAKQLRQI 280
            + +V + L+ +
Sbjct: 408 KMSEVVEVLKPL 419

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1

 Score =  117 bits (293), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 11/192 (5%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP- 148
            P+S+ ++KIA+  A  +++LH    +PV+ RD K + I+L  +  A+L DF L+   P 
Sbjct: 244 LPWSI-RMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPD 302

Query: 149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDG 208
           EG+TH+  S RV+GT+G+ APEY  TG  + KSDVYSFG +LLE+LTG++ S   +  +G
Sbjct: 303 EGKTHV--STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR-SMDKNRPNG 359

Query: 209 EDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP 268
           E   ++      ++   F  ++DP + G   +   +K       T+LA +CLS     RP
Sbjct: 360 EHNLVEWARPHLLDKRRFYRLLDPRLEGHFSIKGAQK------VTQLAAQCLSRDPKIRP 413

Query: 269 TIVQVAKQLRQI 280
            +  V + L+ +
Sbjct: 414 KMSDVVEALKPL 425

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 102/186 (54%), Gaps = 13/186 (6%)

Query: 95  SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG-ETH 153
           ++L+IA E A  + YLH+G   P++ RDIK   I+L     A+L DF LS S P G ETH
Sbjct: 689 NRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETH 748

Query: 154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
           +  S  V G+ G++ PEY  T   +EKSDV+SFG +LLE++T + +   +     E   +
Sbjct: 749 V--STNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTR----EKSHI 802

Query: 214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
            + V   + N   K IVDP++ G+           L    ELA  C+S S   RP + QV
Sbjct: 803 GEWVGFKLTNGDIKNIVDPSMNGD------YDSSSLWKALELAMSCVSPSSSGRPNMSQV 856

Query: 274 AKQLRQ 279
           A +L++
Sbjct: 857 ANELQE 862

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
255542656	331	serine-threonine protein kinase, plant-t	0.919	0.788	0.409	4e-52
224123144	344	predicted protein [Populus trichocarpa]	0.971	0.802	0.375	3e-50
255582635	331	receptor protein kinase, putative [Ricin	0.637	0.546	0.524	4e-45
255542668	307	serine-threonine protein kinase, plant-t	0.947	0.876	0.411	6e-43
255542658	356	serine-threonine protein kinase, plant-t	0.968	0.772	0.364	3e-42
255539344	340	receptor protein kinase, putative [Ricin	0.936	0.782	0.362	2e-39
255542662	330	serine-threonine protein kinase, plant-t	0.651	0.560	0.476	2e-39
359495254	331	PREDICTED: wall-associated receptor kina	0.915	0.785	0.352	4e-37
297740943	321	unnamed protein product [Vitis vinifera]	0.904	0.800	0.352	6e-37
62320087	351	protein kinase - like protein [Arabidops	0.936	0.757	0.295	2e-36

>gi|255542656|ref|XP_002512391.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548352|gb|EEF49843.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  211 bits (536), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 171/320 (53%), Gaps = 59/320 (18%)

Query: 18  KFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQ 77
           K ++ NG+ LLEK +A +NG+ NP+R FS  EL+ AT+ +    V       +LYKG ++
Sbjct: 12  KALMRNGRSLLEKSVALNNGRGNPVRCFSVKELQNATNSYSQHNVFYIDGTCRLYKGLIR 71

Query: 78  DRPISVMKF---------------------------------EDTFPFSV---------- 94
           DRP+ V K+                                 E   P  V          
Sbjct: 72  DRPVIVKKYDYKHPSEDPVSDIVIASEMSVHRNVLKLLGCCLESEIPIPVFEYAEKGTLE 131

Query: 95  -----------SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL 143
                       +LKIA+++AS +AYLH  F RP+V RDI   +I+L E+  A++  F+L
Sbjct: 132 DYVQKTALLWKDRLKIAVDVASVIAYLHTAFPRPIVHRDISLASILLDEDCAAKVTGFSL 191

Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS 203
           S+SIPEGETHI D   V GT G++APEY     F+EK DVYSFG +LL LLTG      S
Sbjct: 192 SISIPEGETHIED--EVAGTIGYVAPEYFMKRMFNEKIDVYSFGVVLLVLLTGHGPILRS 249

Query: 204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSES 263
              + E + L   V+  I+NE F EI+DPAI+ EEG  WPEKEQQL     LA +C  + 
Sbjct: 250 PTTN-ESHALVVFVEAKIKNERFNEIIDPAIL-EEG-PWPEKEQQLKSFLTLAMQCTRKD 306

Query: 264 EGDRPTIVQVAKQLRQIYQS 283
           E DRP I  VAKQLR IY S
Sbjct: 307 EEDRPEITDVAKQLRHIYHS 326

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 191/344 (55%), Gaps = 68/344 (19%)

Query: 1   MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGG 60
           M +C  ++K  +K  K    + NG  LLEKL+   +GK N IRSFSA ELK AT+++D  
Sbjct: 1   MSTCWETKKD-KKVNKETAFIKNGSKLLEKLVDICDGKCNSIRSFSATELKKATNNYDPQ 59

Query: 61  KVIMKCLFYKL-------------------------------------YKGF-------L 76
           K++     YKL                                     +K F       L
Sbjct: 60  KILTGDSGYKLYKGFLQGRPVSVKKFKDDDEQYEYCFNDIVYASKMSVHKSFMKLLGCCL 119

Query: 77  QDR-PISVMKFEDTFPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVV 119
           + R PI V ++   +  S                + + KIA+++A+AVA+LH  FS+P+V
Sbjct: 120 EARIPILVFEYVGDWTLSDFLWGSEEARCQPLLWIPRSKIAMDMANAVAFLHAAFSKPIV 179

Query: 120 SRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSE 179
            R+IKP  I+L + + A+L DF++S+SIP+GE+H+ DS  V G  G +APEY TTG+F+E
Sbjct: 180 FRNIKPLNILLDDNHEAKLSDFSISISIPKGESHVRDS--VAGATGLIAPEYLTTGNFNE 237

Query: 180 KSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG 239
           K DV++FG  LL LL+G+ +   S  +  ++  LQD VKK IE++ F +++D  I+ E  
Sbjct: 238 KQDVFNFGVFLLVLLSGQMVVDFSRPE--KEILLQDHVKKCIEDDRFNKVIDSTIIAEG- 294

Query: 240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
             WP KEQQL   T L+ +C+SE   DRPT++ V+K+LR+IY S
Sbjct: 295 -TWPGKEQQLQAYTALSLRCISELAEDRPTMIDVSKELRKIYWS 337

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/185 (52%), Positives = 132/185 (71%), Gaps = 4/185 (2%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           +LKIA+EIA+AV+YLH  FSRP+V R+IKP  I L E +VA+L DF+L++SIPEGE+H+ 
Sbjct: 149 RLKIAVEIANAVSYLHTAFSRPIVFRNIKPLNIFLDECHVAKLSDFSLAVSIPEGESHVK 208

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
           D   + G +G +APEY  T  F+E  DVY+FG  LL LLTG+K+  S     GE+  L D
Sbjct: 209 D--MLAGAWGLIAPEYAKTSCFNESQDVYNFGVFLLMLLTGQKVVDSYRPQAGEELGLVD 266

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
            VKK+I ++ F E VD  I+GE  L  PEK+QQL   T L+F+C+SE++ DRP ++ VAK
Sbjct: 267 HVKKFIADDRFYETVDSIILGEGSL--PEKDQQLQAFTLLSFRCISEADEDRPMMIDVAK 324

Query: 276 QLRQI 280
           +LR+I
Sbjct: 325 ELRKI 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542668|ref|XP_002512397.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548358|gb|EEF49849.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  180 bits (457), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 172/301 (57%), Gaps = 32/301 (10%)

Query: 1   MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDF--- 57
           M SC + +K          +L NG  LLEK IA +NG+    + + A +++   +D    
Sbjct: 16  MFSCFKGKKD------ETVLLRNGSRLLEKSIALNNGRVIVKKYYWASDMEDPINDIVFA 69

Query: 58  -------DGGKVIMKCLFYKL--------YKGFLQDRPISVMKFEDTFPFSVSKLKIAIE 102
                  +  K++  CL  K+         KG L+D      K +        +L+IA++
Sbjct: 70  SEMSVHKNVLKLLGCCLESKIPILVFECAQKGILKDY---FYKTDSASLLWQIRLRIAVD 126

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           +AS ++YLH  F RP+V RDI  + I+L E+ +A++  F+LS+SIPEG+THI D   V+G
Sbjct: 127 VASVISYLHSAFPRPIVHRDITLSNILLDEDYIAKVTGFSLSMSIPEGKTHIED--EVVG 184

Query: 163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE 222
           T G++AP Y  T  F+EK DVYSFG LLL LLTG++    S       Y L + VK+ IE
Sbjct: 185 TPGYLAPAYFKTLMFNEKIDVYSFGVLLLVLLTGQQPILHSPTTTAR-YSLVNFVKEKIE 243

Query: 223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
           +E F EI+DP I+ EEG  WPEKE+QL I   LA +C  E+E DRP I  VAKQLR IY 
Sbjct: 244 DERFDEIIDPVIL-EEG-PWPEKERQLEIFLTLAMQCTHENEEDRPEITDVAKQLRHIYH 301

Query: 283 S 283
           S
Sbjct: 302 S 302

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 175/362 (48%), Gaps = 87/362 (24%)

Query: 1   MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGG 60
           M SC R        E    ++ NG ILLEK IA +NG+ NPIR FS DEL+TAT+ +   
Sbjct: 1   MFSCFRDNMD----ENETALMRNGGILLEKSIAFNNGRGNPIRWFSVDELQTATNSYSQN 56

Query: 61  KVIMKCLFYKL--------------YKGFLQDR--PISVMKF------------------ 86
            VI +  ++ L              Y+  + +R  PI+ + F                  
Sbjct: 57  NVIYEGGWHTLYKGFLRDRPVIVKRYRNNIHERVCPINDIVFASEMSRHKNVLKLLGCCL 116

Query: 87  EDTFPFSV---------------------------SKLKIAIEIASAVAYLHVGFSRPVV 119
           E   P  V                           S+LKIA++ A+ +AYLH    RPVV
Sbjct: 117 ESEIPILVFEYAEKGKLQDYIYKTDSASFRPLLWKSRLKIAVDAANVIAYLHTACPRPVV 176

Query: 120 SRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSE 179
            RDI  + I L E+ VA++ DFT+S+SI EGETHI D   V+GT G+ APEY  +G F+E
Sbjct: 177 HRDITLSNIWLDEDYVAKVTDFTVSMSILEGETHIEDF--VLGTCGYAAPEYVRSGIFNE 234

Query: 180 KSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI-------ENESFKEI--- 229
           K DV+SFG LLL LLT +K    +  +  +D R  +++   I       E E  +     
Sbjct: 235 KIDVFSFGVLLLVLLTDQKPFQGNWENILKDARFDEIIGSLIVEKGLWSEKEQLETFLTR 294

Query: 230 --------VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY 281
                   +DP IV EEG  WPEKEQQL     L  +C+   E +RP I  VAKQLR  Y
Sbjct: 295 TRQKLDLTIDPIIV-EEG-PWPEKEQQLKAFLMLGVQCIDPDEENRPEITDVAKQLRHFY 352

Query: 282 QS 283
            S
Sbjct: 353 LS 354

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539344|ref|XP_002510737.1| receptor protein kinase, putative [Ricinus communis] gi|223551438|gb|EEF52924.1| receptor protein kinase, putative [Ricinus communis]

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 170/295 (57%), Gaps = 29/295 (9%)

Query: 15  EKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKG 74
           E++K  L NG  LLE+ IA  NG  NPI++FSAD+L  A +DF     +   + +   KG
Sbjct: 46  ERQKCWLENGSKLLEERIAFGNGGGNPIKTFSADKLHEAIEDFRKKHPLNSIIDFTWCKG 105

Query: 75  FLQDRPISVMKF----EDTFPFSV---------SKLKI----------AIEIASAVAYLH 111
            +  R I + K+    ++ +  +V         + LK+          A+E+ASAVAYLH
Sbjct: 106 IMDGRLILIKKYFKSCKEAYQDNVITSHMSTHNNVLKLLGCCLELPGPALEVASAVAYLH 165

Query: 112 VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEY 171
             FS+ +V RD+KP  I L     A+L DF+L +SIPEGE+ + D + + GT+GF+ P Y
Sbjct: 166 TAFSKRIVHRDVKPENIFLDHNFAAKLSDFSLCISIPEGESRVKDCS-ITGTWGFLDPNY 224

Query: 172 RTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD 231
             T   +EK+DV+SFG  +L LLT ++ +++ H+ +     + D V+  +E + F E+  
Sbjct: 225 VLTEFVTEKTDVFSFGVFMLVLLT-EQPAFTRHYSENGG-SVVDHVEYLVERDRFDEVPG 282

Query: 232 PAIVGEEGL--MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN 284
           P I+ E G   + P+   +L   TELA +C   +  DRP+I++VA+QL++IY ++
Sbjct: 283 PGIL-ENGRTEIEPQLRSELQAFTELALRCTHLTGEDRPSILEVAQQLQKIYSTS 336

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/189 (47%), Positives = 127/189 (67%), Gaps = 4/189 (2%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           +LKI  +IA+ V Y+H  F RP+V R+IK + I+L E+ VA+L DF+L +SIPEG++ + 
Sbjct: 143 RLKIVADIANVVVYIHTAFPRPIVHRNIKASNILLDEDYVAKLSDFSLCVSIPEGKSRVR 202

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
           D   + GT G +A E   TG F+EKSDVYSFG +LL +LTG++    S  + GE + L +
Sbjct: 203 DI--MAGTMGLIASESLATGYFNEKSDVYSFGVVLLVVLTGQRSFDFSRTETGEQFLLVN 260

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
            VKK+IE   FKE+VDP IV EE      K Q+L    +LA +C+ +S  +RPT+++VAK
Sbjct: 261 HVKKHIETGGFKEMVDPIIVAEEA--GNRKGQELEDFRDLALRCIHDSAEERPTMIEVAK 318

Query: 276 QLRQIYQSN 284
           QLR IY S+
Sbjct: 319 QLRHIYLSS 327

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495254|ref|XP_002271826.2| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/326 (35%), Positives = 173/326 (53%), Gaps = 66/326 (20%)

Query: 13  KAEKRKFMLGNGKILLEKLIASSNGKH-NPIRSFSADELKTATDDFDGGKV----IMKCL 67
           K  K++ ML NG +LL++ I+  NGK+ NPIRSF   EL+ ATDD++ G +    +  C+
Sbjct: 7   KEMKKESMLKNGSLLLKERISYFNGKYFNPIRSFCMKELQNATDDYNTGLIFDHDVGNCI 66

Query: 68  FYK-------------LYKGF--------------------------LQDR-PISVMKFE 87
           +YK              Y+G                           L+ R PI V +F 
Sbjct: 67  WYKGSLEGRTISVRTNFYEGVEMAINEIVIASQMSAHKNALKLLGCCLETRIPILVYEFP 126

Query: 88  D-----------TFPFSV-SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV 135
                         P S  S+L+IA +IA+ +AYLH+ F R ++  DIKP++  L ++  
Sbjct: 127 SGGSLIDRIFSPPNPLSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFFLDQDCA 186

Query: 136 AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           A+L DF+LS+++PEGE H+ D  R  GTFG++APE   +G ++EK+DV+SFG LLLELL 
Sbjct: 187 AKLSDFSLSITLPEGEMHVEDEIR--GTFGYLAPETLISGVYTEKNDVFSFGILLLELLI 244

Query: 196 GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE-EGLMWPEKEQQLLICTE 254
           GK+     H    E   +QD  + ++       IVDP I+ +  G+    +E Q     +
Sbjct: 245 GKRAHSIMH---EERASIQDYAQSFVNTYDINGIVDPIILAQPRGI---HEELQFQAIFD 298

Query: 255 LAFKCLSESEGDRPTIVQVAKQLRQI 280
           LA +C  +   +RPTIV  AK++R+I
Sbjct: 299 LAMRCSMKDMDERPTIVNAAKEVRRI 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740943|emb|CBI31255.3| unnamed protein product [Vitis vinifera]

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 172/323 (53%), Gaps = 66/323 (20%)

Query: 16  KRKFMLGNGKILLEKLIASSNGKH-NPIRSFSADELKTATDDFDGGKV----IMKCLFYK 70
           K++ ML NG +LL++ I+  NGK+ NPIRSF   EL+ ATDD++ G +    +  C++YK
Sbjct: 2   KKESMLKNGSLLLKERISYFNGKYFNPIRSFCMKELQNATDDYNTGLIFDHDVGNCIWYK 61

Query: 71  -------------LYKGF--------------------------LQDR-PISVMKFED-- 88
                         Y+G                           L+ R PI V +F    
Sbjct: 62  GSLEGRTISVRTNFYEGVEMAINEIVIASQMSAHKNALKLLGCCLETRIPILVYEFPSGG 121

Query: 89  ---------TFPFSV-SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL 138
                      P S  S+L+IA +IA+ +AYLH+ F R ++  DIKP++  L ++  A+L
Sbjct: 122 SLIDRIFSPPNPLSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFFLDQDCAAKL 181

Query: 139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
            DF+LS+++PEGE H+ D  R  GTFG++APE   +G ++EK+DV+SFG LLLELL GK+
Sbjct: 182 SDFSLSITLPEGEMHVEDEIR--GTFGYLAPETLISGVYTEKNDVFSFGILLLELLIGKR 239

Query: 199 ISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE-EGLMWPEKEQQLLICTELAF 257
                H    E   +QD  + ++       IVDP I+ +  G+    +E Q     +LA 
Sbjct: 240 AHSIMH---EERASIQDYAQSFVNTYDINGIVDPIILAQPRGI---HEELQFQAIFDLAM 293

Query: 258 KCLSESEGDRPTIVQVAKQLRQI 280
           +C  +   +RPTIV  AK++R+I
Sbjct: 294 RCSMKDMDERPTIVNAAKEVRRI 316

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62320087|dbj|BAD94258.1| protein kinase - like protein [Arabidopsis thaliana]

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 165/338 (48%), Gaps = 72/338 (21%)

Query: 12  EKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKL 71
           EK + +++ L NG I L +L+A  NGK  PIRSFS +++  AT++FD    + + ++YK 
Sbjct: 15  EKDKAKRWFLDNGSIFLRELVADCNGKSIPIRSFSPEQILKATNNFDSSCFVSQDVYYKW 74

Query: 72  YKGFLQDRPISVMKFED-------------------------------------TFPFSV 94
           Y+G ++DR   + +F +                                      FPF V
Sbjct: 75  YRGEIEDRSYMIKRFSEDEITGKRHRVKEVYNDIVLSARMSNHSNFLQPLGCCLEFPFPV 134

Query: 95  SKLKIA-------------------------IEIASAVA----YLHVGFSRPVVSRDIKP 125
              + A                         ++I   +A    YLH  F + ++ RD+KP
Sbjct: 135 LVFEFAEHGAMNQRGGVIVNGEESLLPWSVRLKIGKEIANAVTYLHTAFPKIIIHRDVKP 194

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYS 185
             + L +   A+L D + S+S+PEG++ I ++  V+GTFG++ P Y  T   +E +DVYS
Sbjct: 195 MHVFLDKNWTAKLSDLSFSISLPEGKSRI-EAEWVLGTFGYIDPLYHKTCFVTEYTDVYS 253

Query: 186 FGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEK 245
           FG  LL ++TGK    +    DG+   +  LV++  EN    E++DP ++ +   +   +
Sbjct: 254 FGICLLVIITGKPAIMT--ISDGDLQGILSLVRELCENGKLDEVIDPRLMKD---ITSGQ 308

Query: 246 EQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
             Q+  C  LA +C  E + DRP ++QVAK+L+QI  S
Sbjct: 309 RLQVEACVVLALRCCKERDEDRPKMIQVAKELKQIEAS 346

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
TAIR|locus:2076586	351	AT3G57710 [Arabidopsis thalian	0.669	0.541	0.385	5.3e-47
TAIR|locus:2076681	359	AT3G57720 [Arabidopsis thalian	0.707	0.559	0.360	1.8e-44
TAIR|locus:2076596	340	AT3G57700 [Arabidopsis thalian	0.658	0.55	0.386	5.9e-44
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.679	0.543	0.37	1.4e-42
TAIR|locus:2076646	334	AT3G57750 [Arabidopsis thalian	0.644	0.547	0.374	1.5e-41
TAIR|locus:2206235	372	AT1G65250 [Arabidopsis thalian	0.647	0.494	0.348	1.3e-34
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.630	0.239	0.391	1.1e-32
TAIR|locus:2032875	720	AT1G16260 [Arabidopsis thalian	0.633	0.25	0.395	2.9e-32
TAIR|locus:2200552	730	WAKL1 "wall associated kinase-	0.626	0.243	0.377	4.3e-32
TAIR|locus:2019893	751	RFO1 "RESISTANCE TO FUSARIUM O	0.626	0.237	0.393	6.1e-32

TAIR|locus:2076586 AT3G57710 [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
 Identities = 76/197 (38%), Positives = 119/197 (60%)

Query:    87 EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS 146
             E   P+SV +LKI  EIA+AV YLH  F + ++ RD+KP  + L +   A+L D + S+S
Sbjct:   157 ESLLPWSV-RLKIGKEIANAVTYLHTAFPKIIIHRDVKPMHVFLDKNWTAKLSDLSFSIS 215

Query:   147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
             +PEG++ I ++  V+GTFG++ P Y  T   +E +DVYSFG  LL ++TGK    +    
Sbjct:   216 LPEGKSRI-EAEWVLGTFGYIDPLYHKTCFVTEYTDVYSFGICLLVIITGKPAIMT--IS 272

Query:   207 DGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD 266
             DG+   +  LV++  EN    E++DP ++ +   +   +  Q+  C  LA +C  E + D
Sbjct:   273 DGDLQGILSLVRELCENGKLDEVIDPRLMKD---ITSGQRLQVEACVVLALRCCKERDED 329

Query:   267 RPTIVQVAKQLRQIYQS 283
             RP ++QVAK+L+QI  S
Sbjct:   330 RPKMIQVAKELKQIEAS 346

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076681 AT3G57720 [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
 Identities = 75/208 (36%), Positives = 121/208 (58%)

Query:    74 GFLQDRPISVMKFEDTF-PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE 132
             G L  R   ++  E+   P S+ +LKI  EIA+AV YLH+ F + ++ R IKP  + L E
Sbjct:   151 GVLNHRGGVIVNGEEVILPLSL-RLKIGKEIANAVTYLHMAFPKILIHRHIKPRNVFLDE 209

Query:   133 ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLE 192
                 +L DF++S+++PEG++ I +   V GT G++ P Y TT   +E +DVYSFG  L+ 
Sbjct:   210 NWTPKLSDFSISINLPEGKSRI-EVECVQGTIGYLDPVYYTTKMVTEYTDVYSFGVFLMV 268

Query:   193 LLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC 252
             +LTGK  + +S   DG+   +   VK + EN     ++DP ++  E +   +K   +  C
Sbjct:   269 ILTGKP-ALASTSSDGDYKHIASYVKGFHENGQLDGVIDPKVM--EDITSAQKVH-VEAC 324

Query:   253 TELAFKCLSESEGDRPTIVQVAKQLRQI 280
               LA +C    + +RP ++Q+AK+L+QI
Sbjct:   325 VVLALRCCELRDENRPKMIQIAKELKQI 352

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076596 AT3G57700 [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
 Identities = 75/194 (38%), Positives = 114/194 (58%)

Query:    89 TFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP 148
             +FP++V +L+IA EIA AVAYLH  F R ++ RD+K   I L E   A+L  F+LS+ +P
Sbjct:   148 SFPWNV-RLRIAKEIADAVAYLHTEFPRTIIHRDLKLANIFLDENWSAKLSSFSLSIVLP 206

Query:   149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDG 208
             EGET +ND   V  T  ++ P+Y  TG  +E  D+YS G ++L +LTGK   Y+S     
Sbjct:   207 EGETGVNDM--VCRTSSYIEPDYFNTGLVTENVDIYSLGIIMLIILTGKS-EYNSEVAVY 263

Query:   209 EDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQ-QLLICTELAFKCLSESEGDR 267
                 L   V K++E     E++DP+I+       P+  + Q+    ELAF+C+    G+ 
Sbjct:   264 LPV-LPVYVGKFLERGLLTELIDPSILDSTSDDIPKHSRLQMEAFIELAFRCVRFRPGEN 322

Query:   268 -PTIVQVAKQLRQI 280
              P ++ VAK+L++I
Sbjct:   323 VPRMIDVAKELKKI 336

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
 Identities = 74/200 (37%), Positives = 116/200 (58%)

Query:    81 ISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD 140
             I+V   E   P S+ +LKI  EIA+A+AYLH+ F + ++ RD+KP  + L     A+L D
Sbjct:   156 ITVNGEESLLPLSL-RLKIGKEIANALAYLHMAFPKIIIYRDVKPLHVFLDNNWTAKLSD 214

Query:   141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKIS 200
              + S+S+ EG++ I ++  V+GT+G++ P Y  T   +E +DVYSFG  L+ ++TG  + 
Sbjct:   215 LSFSISLEEGKSQI-EAEDVLGTYGYLDPLYFATRIVTEYTDVYSFGVFLMVVITGISVY 273

Query:   201 YSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCL 260
             ++    DG    +   +K   EN    EIV P I+ E   M   +  Q+  C  LA +C 
Sbjct:   274 FTG--SDGYPVGILGYMKGLAENGKLNEIVYPMIMKE---MTSAQRLQVEACVLLALRCC 328

Query:   261 SESEGDRPTIVQVAKQLRQI 280
              E   DRP ++QVAK+L++I
Sbjct:   329 EERVEDRPKMIQVAKELKRI 348

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076646 AT3G57750 [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
 Identities = 73/195 (37%), Positives = 110/195 (56%)

Query:    91 PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
             P+ V +LKIA EIAS+V YLH  F   +V R+I PT I + E   A+L DF   ++IPEG
Sbjct:   143 PWKV-RLKIAKEIASSVTYLHTAFPETIVHRNINPTNIFIDENWTAKLSDFWFCVAIPEG 201

Query:   151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED 210
             E ++ D   V G  GF+ P+Y  T   +EK D+YSFG ++L LL+G+   ++    D   
Sbjct:   202 ELYVEDD--VKGVIGFVDPDYYWTMKVTEKVDIYSFGVVMLVLLSGRAAVFNG--PDEAP 257

Query:   211 YRLQDLVKKYIENESFKEIVDPAIV----GEEGLMWPEKEQQLLICTELAFKCLSESEGD 266
               L D V + +E   F EIVD  I     G++ L+   +  Q+     LA +C+   + D
Sbjct:   258 MSLNDHVSEVMEKGEFDEIVDKEIWNDLGGDDDLVL--RRSQVKAFLRLALRCVRYKKED 315

Query:   267 RPT-IVQVAKQLRQI 280
               + +++VAK+L+ I
Sbjct:   316 PVSGMLEVAKELKLI 330

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2206235 AT1G65250 [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 70/201 (34%), Positives = 116/201 (57%)

Query:    96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
             ++KIA +IA+A+AYLH  F RP V R +    I+L E+ VA+L DF+  +SIPEGET + 
Sbjct:   147 RMKIAEDIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSIPEGETFVR 206

Query:   156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALL-LELLTGKKISYSSHFDDGEDYRLQ 214
               +R +G + + A  Y  +G  S+K+DV++FG  +   LL G +  Y  H+  GE+   +
Sbjct:   207 -VDRDVGLYSYFADNYVRSGLVSDKTDVFAFGIFMGHRLLLGYEY-YFEHYR-GEEEESE 263

Query:   215 D----LVKKYIEN--------ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSE 262
             D    L+K++  N           +EI D  ++ + G +  ++  Q+    +L+ +C   
Sbjct:   264 DGFDSLMKRHARNLLSTLKEDRPMEEIADSKMIEKMGQISEQERCQMKAFLKLSLRCTGP 323

Query:   263 SEGDRPTIVQVAKQLRQIYQS 283
             SE + PT+V+VAK+L +I +S
Sbjct:   324 SE-EVPTMVEVAKELNKIQRS 343

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
 Identities = 74/189 (39%), Positives = 107/189 (56%)

Query:    96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
             +L IAIEIA A++YLH   S P+  RDIK T I+L E N A++ DF  S S+   +TH+ 
Sbjct:   515 RLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHL- 573

Query:   156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
              + +V GTFG++ PEY  +  F+EKSDVYSFG +L+ELLTG+K S     ++        
Sbjct:   574 -TTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAH- 631

Query:   216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
              V+   EN    +IVD  I  E  +       Q++    LA +CL+     RP + +V+ 
Sbjct:   632 FVEAVKENRVL-DIVDDRIKDECNM------DQVMSVANLARRCLNRKGKKRPNMREVSI 684

Query:   276 QLRQIYQSN 284
             +L  I  S+
Sbjct:   685 ELEMIRSSH 693

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2032875 AT1G16260 [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
 Identities = 76/192 (39%), Positives = 112/192 (58%)

Query:    87 EDTFPFSVS-KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
             ED FP S   +L IA E+A A++YLH   S P+  RD+K T I+L E++ A++ DF +S 
Sbjct:   480 ED-FPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISR 538

Query:   146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF 205
             S+   +TH+  +  V GT G++ PEY  +  F+ KSDVYSFG LL+ELLTG+K    S  
Sbjct:   539 SVAIDDTHL--TTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPV--SLL 594

Query:   206 DDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEG 265
                E   L     + + N+   EI+D A + EE     ++E+ L +  +LA +CLS +  
Sbjct:   595 RRQEVRMLGAYFLEAMRNDRLHEILD-ARIKEEC----DREEVLAVA-KLARRCLSLNSE 648

Query:   266 DRPTIVQVAKQL 277
              RPT+  V  +L
Sbjct:   649 HRPTMRDVFIEL 660

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200552 WAKL1 "wall associated kinase-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
 Identities = 71/188 (37%), Positives = 108/188 (57%)

Query:    96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
             +L+IAIEIA A+ Y+H   S P+  RDIK T I+L E+  A++ DF  S S+   +TH+ 
Sbjct:   528 RLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHL- 586

Query:   156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
              +  V GTFG+M PEY  +  ++ KSDVYSFG +L+EL+TG+K       ++G       
Sbjct:   587 -TTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHF 645

Query:   216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
             L +   EN    +I+D  I  E  L      +Q++   +LA KCL+    +RP + +V+ 
Sbjct:   646 L-EAMKENRVI-DIIDIRIKDESKL------EQVMAVAKLARKCLNRKGKNRPNMKEVSN 697

Query:   276 QLRQIYQS 283
             +L +I  S
Sbjct:   698 ELERIRSS 705

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019893 RFO1 "RESISTANCE TO FUSARIUM OXYSPORUM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 6.1e-32, Sum P(2) = 6.1e-32
 Identities = 74/188 (39%), Positives = 112/188 (59%)

Query:    96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
             +L+I++EIA A+AYLH   S PV  RD+K T I+L E+  A++ DF  S SI   +TH+ 
Sbjct:   520 RLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHL- 578

Query:   156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
              +  V GTFG++ PEY  T  F++KSDVYSFG +L+EL+TG+K  +S    + E+  L  
Sbjct:   579 -TTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEK-PFSVMRPE-ENRGLVS 635

Query:   216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
                + ++     +IVD  I  +EG       +Q+L   +LA +CLS     RP + +V+ 
Sbjct:   636 HFNEAMKQNRVLDIVDSRI--KEGCTL----EQVLAVAKLARRCLSLKGKKRPNMREVSV 689

Query:   276 QLRQIYQS 283
             +L +I  S
Sbjct:   690 ELERIRSS 697

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009620 "response to fungus" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XIII000087 hypothetical protein (344 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	284
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-16
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-16
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-15
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-15
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-14
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-14
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-14
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-13
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	4e-13
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-13
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-13
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-13
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	7e-12
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-11
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-10
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-10
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-10
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-10
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	9e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-09
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-09
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-09
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-09
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-09
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	7e-09
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-08
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-08
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-08
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-08
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-08
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-08
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-08
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-08
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-08
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	5e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	5e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-08
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	6e-08
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	7e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-08
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	9e-08
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-07
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-07
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-07
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	4e-07
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	5e-07
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	5e-07
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	6e-07
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-07
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	7e-07
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	8e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	8e-07
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	8e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-06
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-06
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-06
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-06
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-06
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	4e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	4e-06
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-06
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	5e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	5e-06
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	5e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-06
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-06
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	5e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	6e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-06
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	8e-06
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	9e-06
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-06
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	9e-06
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	2e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-05
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-05
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-05
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	5e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	5e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	6e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	7e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	7e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-05
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	8e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	8e-05
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	9e-05
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	9e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-05
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	9e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	9e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-04
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-04
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	3e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	4e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	4e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	4e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-04
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	5e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	6e-04
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	6e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	6e-04
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	6e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	7e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	7e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	9e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	9e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.001
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.001
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.001
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.001
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.001
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.001
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	0.002
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	0.002
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.002
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	0.002
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.002
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.002
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.002
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.002
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	0.002
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.003
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.003
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.003
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 8/100 (8%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHI 154
            L+I ++I   + YLH   S  ++ RD+KP  I+L  +N   +L DF LS  +   +   
Sbjct: 94  ILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK--- 147

Query: 155 NDSNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLEL 193
           +    ++GT  +MAPE     G +SEKSD++S G +L EL
Sbjct: 148 SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 75.8 bits (187), Expect = 4e-16
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 25/177 (14%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KIA++I   + YLH   S  ++ RD+KP  I+L E  V ++ DF L+       +    +
Sbjct: 102 KIALQILRGLEYLH---SNGIIHRDLKPENILLDENGVVKIADFGLA-KKLLKSSSSLTT 157

Query: 158 NRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
              +GT  +MAPE       +  K DV+S G +L ELLTGK      +  D         
Sbjct: 158 --FVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILD--------- 206

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
                + +  + I+ P +        P+         +L  KCL++    RPT  ++
Sbjct: 207 -----QLQLIRRILGPPL----EFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEI 254

Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 75.3 bits (186), Expect = 6e-16
 Identities = 46/208 (22%), Positives = 79/208 (37%), Gaps = 31/208 (14%)

Query: 73  KGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE 132
             +L+         E +       L  AI+IA  + YL    S+  V RD+     ++ E
Sbjct: 84  LDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGE 140

Query: 133 ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLE 192
           + V ++ DF LS  + + + +   +   +    +MAPE    G F+ KSDV+SFG LL E
Sbjct: 141 DLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR-WMAPESLKDGIFTSKSDVWSFGVLLWE 199

Query: 193 LLTGKKISYSSHFDDGEDYRLQDLVKKYIENE--SFKEIVDPAIVGEEGLMWPEKEQQLL 250
           + T     Y            +++++   +       E     +                
Sbjct: 200 IFTLGATPY-------PGLSNEEVLEYLRKGYRLPKPEYCPDEL---------------- 236

Query: 251 ICTELAFKCLSESEGDRPTIVQVAKQLR 278
              EL   C      DRPT  ++ ++L 
Sbjct: 237 --YELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 73.7 bits (182), Expect = 2e-15
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
             +I   +AYLH   S  +V RDIK   I++  + V +L DF  +  + + ET    +  
Sbjct: 107 TRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET-GEGTGS 162

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           V GT  +MAPE     ++   +D++S G  ++E+ TGK
Sbjct: 163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 72.6 bits (179), Expect = 5e-15
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 8/116 (6%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
            ++K         ++     +I SA+ YLH   S+ +V RD+KP  I+L E+   +L DF
Sbjct: 86  DLLKKRGRLSEDEAR-FYLRQILSALEYLH---SKGIVHRDLKPENILLDEDGHVKLADF 141

Query: 142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            L+  +  GE         +GT  +MAPE      + +  D++S G +L ELLTGK
Sbjct: 142 GLARQLDPGEKL----TTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 72.2 bits (178), Expect = 6e-15
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 28/182 (15%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
            L  A++IA  + YL    S+  + RD+     ++ E  V ++ DF LS  + + + +  
Sbjct: 104 LLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRK 160

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
              ++     +MAPE    G F+ KSDV+SFG LL E+ T  +  Y       E+     
Sbjct: 161 RGGKL--PIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPG--MSNEE----- 211

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
            V +Y++N                   P +        +L  +C +E   DRPT  ++ +
Sbjct: 212 -VLEYLKNGYRLPQPPNC---------PPE------LYDLMLQCWAEDPEDRPTFSELVE 255

Query: 276 QL 277
            L
Sbjct: 256 IL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 91  PFSVSKLKIAI-EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
            FS  ++K  I EI  A+ YLH   S+ ++ RDIKP  I+L E+    + DF ++  +  
Sbjct: 96  KFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152

Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
                  +    GT G+MAPE      +S   D +S G    E L GK+
Sbjct: 153 DTL----TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKR 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 69.9 bits (172), Expect = 5e-14
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 12/130 (9%)

Query: 73  KGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE 132
             +L+      +   D        L  A++IA  + YL    S+  + RD+     ++ E
Sbjct: 89  LDYLRKNRPKELSLSD-------LLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGE 138

Query: 133 ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLE 192
             V ++ DF LS  + + + +     ++     +MAPE    G F+ KSDV+SFG LL E
Sbjct: 139 NLVVKISDFGLSRDLYDDDYYKVKGGKL--PIRWMAPESLKEGKFTSKSDVWSFGVLLWE 196

Query: 193 LLTGKKISYS 202
           + T  +  Y 
Sbjct: 197 IFTLGEEPYP 206

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 69.4 bits (171), Expect = 7e-14
 Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 42/186 (22%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L   +++  A+ YLH   SR ++ RDIKP  I L    + +L DF +S  +    + ++ 
Sbjct: 106 LDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVL---SSTVDL 159

Query: 157 SNRVIGTFGFMAPE------YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED 210
           +  V+GT  +++PE      Y      + KSD++S G +L EL T K      +      
Sbjct: 160 AKTVVGTPYYLSPELCQNKPY------NYKSDIWSLGCVLYELCTLKHPFEGEN------ 207

Query: 211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI 270
             L +L  K I    +  I  P+    E           L    L    L +   +RP+I
Sbjct: 208 --LLELALK-ILKGQYPPI--PSQYSSE-----------LR--NLVSSLLQKDPEERPSI 249

Query: 271 VQVAKQ 276
            Q+ + 
Sbjct: 250 AQILQS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 69.1 bits (170), Expect = 9e-14
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
           S +  E  F    ++   A EI  A+ YLH   S  ++ RD+KP  I+L  +   +L DF
Sbjct: 82  SHLSKEGRFSEERARFYAA-EIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDF 137

Query: 142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            L+  +    +  N      GT  ++APE      + +  D +S G LL E+LTGK    
Sbjct: 138 GLAKELSSEGSRTNT---FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK---- 190

Query: 202 SSHFDDGEDYRLQDLVKKYIENESFKEIVDP 232
              F   +   + + + K  +   F E + P
Sbjct: 191 -PPFYAEDRKEIYEKILK--DPLRFPEFLSP 218

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 39/182 (21%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +  E+   + YLH   S  ++ RDIK   I+L  +   +L DF LS  +    +     N
Sbjct: 103 VCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQL----SDTKARN 155

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
            ++GT  +MAPE      +  K+D++S G   +EL  GK                     
Sbjct: 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK--------------------P 195

Query: 219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTEL-AF--KCLSESEGDRPTIVQVAK 275
            Y E    K +   A  G  GL  PEK        E   F  KCL ++   RPT    A+
Sbjct: 196 PYSELPPMKALFKIATNGPPGLRNPEK-----WSDEFKDFLKKCLQKNPEKRPT----AE 246

Query: 276 QL 277
           QL
Sbjct: 247 QL 248

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 69.1 bits (169), Expect = 4e-13
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 21/183 (11%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KIAI IA A+ +LH   S  VV  ++ P  I++  ++   L      LS+P       D+
Sbjct: 784 KIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-----RLSLPG--LLCTDT 836

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV 217
              I +  ++APE R T D +EKSD+Y FG +L+ELLTGK  +      D E      +V
Sbjct: 837 KCFISS-AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPA------DAEFGVHGSIV 889

Query: 218 K--KYIENESFKEI-VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA 274
           +  +Y  ++   ++ +DP+I G+  +     + +++    LA  C +     RP    V 
Sbjct: 890 EWARYCYSDCHLDMWIDPSIRGDVSV----NQNEIVEVMNLALHCTATDPTARPCANDVL 945

Query: 275 KQL 277
           K L
Sbjct: 946 KTL 948

Length = 968

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 66.9 bits (164), Expect = 4e-13
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
            ++K    FP S+  + +  ++   +AYLH    + V+ RDIK   I+  ++ V +L DF
Sbjct: 88  QIIKKFGPFPESLVAVYVY-QVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADF 143

Query: 142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++  + +      D   V+GT  +MAPE       S  SD++S G  ++ELLTG 
Sbjct: 144 GVATKLNDVS---KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 67.1 bits (164), Expect = 6e-13
 Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 27/175 (15%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KIA  +   ++YLH   SR ++ RDIKP+ I+L  +   +L DF +S     GE   + +
Sbjct: 109 KIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVS-----GELVNSLA 160

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF---DDGEDYRLQ 214
               GT  +MAPE      +S  SDV+S G  LLE+   +       F    +GE     
Sbjct: 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR-------FPFPPEGEPPLGP 213

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT 269
             +  YI N    E+ D       G+ W E+ +  +        CL +    RPT
Sbjct: 214 IELLSYIVNMPNPELKDEP---GNGIKWSEEFKDFIKQ------CLEKDPTRRPT 259

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 66.8 bits (164), Expect = 7e-13
 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 14/126 (11%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
            L++A++IA  + YL    S+  V RD+     ++ E  V ++ DF LS  I E + +  
Sbjct: 104 LLQMALQIAKGMEYLE---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRK 160

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS--------SHFDD 207
                +    +MAPE    G F+ KSDV+SFG LL E+ T  +  Y            +D
Sbjct: 161 RGGGKLPIK-WMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLED 219

Query: 208 GEDYRL 213
           G  YRL
Sbjct: 220 G--YRL 223

Length = 258

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 13/173 (7%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
           S+++   +    V+++ IA EI  A+ YLH   S  ++ RD+KP  I++      +L DF
Sbjct: 82  SLLENVGSLDEDVARIYIA-EIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDF 137

Query: 142 TLSLSIPEGET-----HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            LS                +  R++GT  ++APE       S+  D +S G +L E L G
Sbjct: 138 GLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197

Query: 197 KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQL 249
                     +  +   Q+++   IE     E+ D AI     L+ P+ E++L
Sbjct: 198 ----IPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRL 246

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 64.0 bits (156), Expect = 7e-12
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 27/176 (15%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND- 156
           KIA+ +   + YL+      ++ RDIKP+ I++      +L DF +S     GE  IN  
Sbjct: 107 KIAVAVVEGLTYLY--NVHRIMHRDIKPSNILVNSRGQIKLCDFGVS-----GEL-INSI 158

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK-KISYSSHFDDGEDYRLQ- 214
           ++  +GT  +M+PE    G ++ KSDV+S G  ++EL  GK   ++S+  DDG+D  +  
Sbjct: 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGI 218

Query: 215 -DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT 269
            DL+++              IV E     P          +    CL +   +RPT
Sbjct: 219 LDLLQQ--------------IVQEPPPRLP-SSDFPEDLRDFVDACLLKDPTERPT 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 28/184 (15%)

Query: 34  SSNGKHNP--IRSFSADELKTATDDFDGGKVIMKCL----FYKLYKGFLQDRPISVMKFE 87
           +S GK  P  ++   +D+L    DDF     IM  L      +LY G +   P+ +M  E
Sbjct: 18  TSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY-GVVLTHPL-MMVTE 75

Query: 88  --------DTF------PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE 132
                   D         F +S L   A++IA+ + YL    S+  + RD+    I+L  
Sbjct: 76  LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLAS 132

Query: 133 ENVAQLFDFTLSLSIPEGETH-INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLL 191
           ++  ++ DF L  ++P+ E H + + +  +  F + APE   T  FS  SDV+ FG  L 
Sbjct: 133 DDKVKIGDFGLMRALPQNEDHYVMEEHLKV-PFAWCAPESLRTRTFSHASDVWMFGVTLW 191

Query: 192 ELLT 195
           E+ T
Sbjct: 192 EMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 62.8 bits (151), Expect = 3e-11
 Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 23/217 (10%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           L  +   G   +  +  +  +     S +   I  +I SA+ YLH   S+ ++ RDIKP 
Sbjct: 75  LVMEYVDGGSLEDLLKKIGRKGPLSESEAL-FILAQILSALEYLH---SKGIIHRDIKPE 130

Query: 127 TIVLQEE-NVAQLFDFTLSLSIPEGETHIND---SNRVIGTFGFMAPEY---RTTGDFSE 179
            I+L  +  V +L DF L+  +P+  +  +     +  +GT G+MAPE     +    S 
Sbjct: 131 NILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASS 190

Query: 180 KSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG 239
            SD++S G  L ELLTG        F+  ++        K I       +  P       
Sbjct: 191 SSDIWSLGITLYELLTGL-----PPFEGEKNSSATSQTLKIILELPTPSLASPLS----- 240

Query: 240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                 E      ++L  K L++   +R +       
Sbjct: 241 --PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275

Length = 384

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 61.8 bits (151), Expect = 4e-11
 Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 28/163 (17%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-------- 141
                ++   A EI  A+ YLH   S+ ++ RD+KP  I+L ++   ++ DF        
Sbjct: 99  LDEKCTRFYAA-EILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154

Query: 142 -TLSLSIPEGETHINDSNRV--------IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLE 192
            +   S     T+I+             +GT  +++PE        + SD+++ G ++ +
Sbjct: 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQ 214

Query: 193 LLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV 235
           +LTGK       F    +Y     + K     SF     P   
Sbjct: 215 MLTGK-----PPFRGSNEYLTFQKILK--LEYSFPPNFPPDAK 250

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-N 158
            +++   +AYLH   S  +V RDIKP  I L    V +L DF  ++ +    T + +   
Sbjct: 105 TLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQ 161

Query: 159 RVIGTFGFMAPEYRTTGDFSEK---SDVYSFGALLLELLTGKK 198
            + GT  +MAPE  T G        +D++S G ++LE+ TGK+
Sbjct: 162 SLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 28/158 (17%)

Query: 68  FYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTT 127
             K  +G + +R +                KIA+ +   + YLH      ++ RD+KP+ 
Sbjct: 89  ILKEVQGRIPERILG---------------KIAVAVLKGLTYLHE--KHKIIHRDVKPSN 131

Query: 128 IVLQEENVAQLFDFTLSLSIPEGETHIND-SNRVIGTFGFMAPEYRTTGDFSEKSDVYSF 186
           I++      +L DF +S     G+  +N  +   +GT  +MAPE     D+S KSD++S 
Sbjct: 132 ILVNSRGQIKLCDFGVS-----GQL-VNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSL 185

Query: 187 GALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE 224
           G  L+EL TG +  Y    +D  D   + L  +YI NE
Sbjct: 186 GLSLIELATG-RFPYPPE-NDPPDGIFELL--QYIVNE 219

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 37/186 (19%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
            IA +I   + YLH    R ++ RDIKP+ +++  +   ++ DF +S  +   E  ++  
Sbjct: 103 YIARQILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVL---ENTLDQC 157

Query: 158 NRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           N  +GT  +M+PE R  G+ +S  +D++S G  LLE   GK             +     
Sbjct: 158 NTFVGTVTYMSPE-RIQGESYSYAADIWSLGLTLLECALGK-------------FPFLPP 203

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTEL-AF--KCLSESEGDRPTIVQV 273
                   SF E++  AI        P +E       E   F   CL +    RP+    
Sbjct: 204 -----GQPSFFELMQ-AICDGPPPSLPAEE----FSPEFRDFISACLQKDPKKRPS---- 249

Query: 274 AKQLRQ 279
           A +L Q
Sbjct: 250 AAELLQ 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
            +I SAV+Y+H      ++ RDIK   I L +  + +L DF +S  +    +  + +  V
Sbjct: 108 FQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKIL---GSEYSMAETV 161

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
           +GT  +M+PE      ++ KSD+++ G +L ELLT K+
Sbjct: 162 VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 59.0 bits (143), Expect = 9e-10
 Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 27/138 (19%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L I  +I + + Y+H   S+ V+ RD+KP  I+L       + D+  ++     E  + D
Sbjct: 116 LSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD 172

Query: 157 SN---------------RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT------ 195
            +               +++GT  +MAPE       SE +D+Y+ G +L ++LT      
Sbjct: 173 IDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232

Query: 196 ---GKKISYSSHFDDGED 210
              G+KISY        +
Sbjct: 233 RKKGRKISYRDVILSPIE 250

Length = 932

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A A+ +LH   S  ++ RD+KP  I+L EE   +L DF LS    E   H   +    
Sbjct: 106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 159

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  +MAPE       ++ +D +SFG L+ E+LTG
Sbjct: 160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 18/131 (13%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           +LQ      +K           + +A ++AS +AYL    ++  + RD+    +++ E N
Sbjct: 91  YLQGGAGRALKLPQ-------LIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENN 140

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGT---FGFMAPEYRTTGDFSEKSDVYSFGALLL 191
           + ++ DF L+  I E     +      G      + APE      FS KSDV+SFG LL 
Sbjct: 141 ICKVADFGLARVIKE-----DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLT 195

Query: 192 ELLTGKKISYS 202
           E++T  ++ Y 
Sbjct: 196 EIVTYGRMPYP 206

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IA  +AYL    SR  + RD+    I++ E  V ++ DF L+  I + E    +  
Sbjct: 108 MAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA 164

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS 203
           +      + APE    G F+ KSDV+SFG LL E++T  ++ Y  
Sbjct: 165 KF--PIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPG 207

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 97  LKIAIEIASAVAYLHVGF--SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI 154
            +I  ++  A+   H        V+ RD+KP  I L   N  +L DF L+  +       
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL---GHDS 164

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           + +   +GT  +M+PE      + EKSD++S G L+ EL    
Sbjct: 165 SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 55.5 bits (134), Expect = 5e-09
 Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 6/105 (5%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +A ++A  +AYL     +  + RD+    I++ E+ V ++ DF L+  I E + +++ 
Sbjct: 107 IDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE-DVYLSS 162

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             ++   + + APE  + G FS KSDV+SFG LL E+ T  ++ Y
Sbjct: 163 DKKI--PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPY 205

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 55.5 bits (134), Expect = 5e-09
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 15/128 (11%)

Query: 73  KGFLQDRPISVMKFEDTFPFSVSK---LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIV 129
           K FLQ   +     E   P ++S    + +AI+IA  ++YLH    R V+ +DI     V
Sbjct: 97  KLFLQQCRLG----EANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCV 149

Query: 130 LQEENVAQLFDFTLSLSIPEGETHI--NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFG 187
           + EE   ++ D  LS  +   + H   ++ NR +    +MA E     ++S  SDV+SFG
Sbjct: 150 IDEELQVKITDNALSRDLFPMDYHCLGDNENRPVK---WMALESLVNKEYSSASDVWSFG 206

Query: 188 ALLLELLT 195
            LL EL+T
Sbjct: 207 VLLWELMT 214

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 55.3 bits (133), Expect = 7e-09
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN--- 158
           +I   VAYLH   +  VV RDIK   ++L    + +L DF  +  +     H   SN   
Sbjct: 110 QILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLK 166

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            + GT  +MAPE      +  KSD++S G  + E+ TGK
Sbjct: 167 SMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 55.0 bits (132), Expect = 7e-09
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 9/105 (8%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L+ ++++A  + YL    S+ +V RD+    I++ E+ VA++ DF L+     G     D
Sbjct: 103 LQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----D 155

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           ++++     + APE      FS KSDV+S+G LL E+ +  +  Y
Sbjct: 156 NSKL--PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A +I   +AYLH   S+  + RD+    ++L  + + ++ DF L+ ++PEG  +   
Sbjct: 110 LLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 166

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                    + A E      FS  SDV+SFG  L ELLT
Sbjct: 167 REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 54.6 bits (131), Expect = 1e-08
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 30/182 (16%)

Query: 26  ILLEKLIASSNGKHNPI----RSF-SADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRP 80
           I+ E+ +   N KH  +     SF + ++L    D  +GG+     LF+ L +       
Sbjct: 42  IMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGE-----LFFHLQR------- 89

Query: 81  ISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD 140
                 E +FP   ++   A EIASA+ YLH   S  +V RD+KP  I+L  +    L D
Sbjct: 90  ------ERSFPEPRARFYAA-EIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTD 139

Query: 141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKIS 200
           F L     EG    + +    GT  ++APE      +    D +  GA+L E+L G    
Sbjct: 140 FGLC---KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPF 196

Query: 201 YS 202
           Y 
Sbjct: 197 YC 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 11/122 (9%)

Query: 82  SVMKFEDTFPFSVSKLKIAI----EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ 137
            +MK   ++P       I      E+   + YLH   S   + RDIK   I+L E+   +
Sbjct: 88  DIMKS--SYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVK 142

Query: 138 LFDFTLSLSIPEGETHINDS-NRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLT 195
           + DF +S S+ +G           +GT  +MAPE       +  K+D++SFG   +EL T
Sbjct: 143 IADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT 202

Query: 196 GK 197
           G 
Sbjct: 203 GA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 12/121 (9%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   + +LH    R ++ RD+K   ++L  E   ++ DF +     EG      ++ 
Sbjct: 102 AAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMC---KEGILGGVTTST 155

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD-DGEDYRLQDLVK 218
             GT  ++APE  +   +    D ++ G LL E+L G+     S F+ D ED   Q +++
Sbjct: 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQ-----SPFEGDDEDELFQSILE 210

Query: 219 K 219
            
Sbjct: 211 D 211

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)

Query: 70  KLYKGFLQ-DRPISVMKFEDTFP--------------FSVSKL-KIAIEIASAVAYLHVG 113
           + YK FL+ DR   VM   +  P              F+  ++  I +++  A+ YLH  
Sbjct: 73  RYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK- 131

Query: 114 FSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT 173
             + +V RD+ P  I+L E++   + DF L+          +    V+GT  +  PE   
Sbjct: 132 -EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTS----VVGTILYSCPEIVK 186

Query: 174 TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA 233
              + EK+DV++FG +L ++ T +   YS++        +  L  K +E        +P 
Sbjct: 187 NEPYGEKADVWAFGCILYQMCTLQPPFYSTN--------MLSLATKIVEAV-----YEPL 233

Query: 234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA 274
               EG M+ E        T++   CL+     RP I+QV+
Sbjct: 234 ---PEG-MYSED------VTDVITSCLTPDAEARPDIIQVS 264

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 27/143 (18%)

Query: 63  IMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRD 122
           +M     K YK         V     T P  +   KIA+ I  A+ YLH   S  V+ RD
Sbjct: 81  VMDTSLDKFYK--------KVYDKGLTIPEDILG-KIAVSIVKALEYLHSKLS--VIHRD 129

Query: 123 IKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS---NRVIGTFGFMAPEYRTTGD--- 176
           +KP+ +++      +L DF +S        ++ DS       G   +MAPE R   +   
Sbjct: 130 VKPSNVLINRNGQVKLCDFGIS-------GYLVDSVAKTIDAGCKPYMAPE-RINPELNQ 181

Query: 177 --FSEKSDVYSFGALLLELLTGK 197
             +  KSDV+S G  ++EL TG+
Sbjct: 182 KGYDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 54.2 bits (130), Expect = 2e-08
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 92  FSVSKLKI-AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           FS ++++  A EI   + ++H  F   VV RD+KP  I+L E    ++ D  L+    + 
Sbjct: 94  FSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 150

Query: 151 ETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTG 196
           + H +     +GT G+MAPE    G  +   +D +S G +L +LL G
Sbjct: 151 KPHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 13/107 (12%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A+++   + YL     +  V RD+    +++ E+ VA++ DF L+    +G+     
Sbjct: 105 LGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---- 157

Query: 157 SNRVIGTF--GFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
                G     + APE      FS KSDV+SFG LL E+ +  ++ Y
Sbjct: 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I   + +LH    R +V RD+KP  ++L +    ++ D  L++ +  G+        
Sbjct: 101 AAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK----IKG 153

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             GT G+MAPE      +    D ++ G  L E++ G+
Sbjct: 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 26/160 (16%)

Query: 44  SF-SADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIE 102
           SF +AD+L    D  +GG+     LF+ L +             E +FP   ++   A E
Sbjct: 64  SFQTADKLYFVLDYVNGGE-----LFFHLQR-------------ERSFPEPRARF-YAAE 104

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           IASA+ YLH   S  ++ RD+KP  I+L  +    L DF L     EG  H   ++   G
Sbjct: 105 IASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLC---KEGIEHSKTTSTFCG 158

Query: 163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
           T  ++APE      +    D +  GA+L E+L G    YS
Sbjct: 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG-ETHIN 155
           L  + +I   + YL    S+  + RD+    I+++ E++ ++ DF L+  +PE  + +  
Sbjct: 112 LLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYV 168

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                   F + APE   T  FS  SDV+SFG  L EL T
Sbjct: 169 KEPGESPIFWY-APECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   +  LH      +V RD+KP  I+L +    ++ D  L++ +PEG+T      R
Sbjct: 108 AAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGR 161

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           V GT G+MAPE      ++   D ++ G LL E++ G+
Sbjct: 162 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 53.5 bits (128), Expect = 3e-08
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 92  FSVSKLKI-AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           FS  +++  A EI   + ++H   +R VV RD+KP  I+L E    ++ D  L+    + 
Sbjct: 94  FSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 150

Query: 151 ETHINDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTG 196
           + H +     +GT G+MAPE    G  +   +D +S G +L +LL G
Sbjct: 151 KPHAS-----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 53.3 bits (129), Expect = 3e-08
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 7/112 (6%)

Query: 90  FPFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP 148
             F+ S++K    ++   + YLH   S  ++ RDIK + I++  + V +L DF L+    
Sbjct: 95  VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPY- 150

Query: 149 EGETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKI 199
                 + +NRVI T  +  PE       +  + D++S G +L EL  GK I
Sbjct: 151 TKRNSADYTNRVI-TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPI 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 10/104 (9%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K+ + I  A+ YL       V+ RD+KP+ I+L      +L DF +S  + + +      
Sbjct: 118 KMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK---- 171

Query: 158 NRVIGTFGFMAPEYRT----TGDFSEKSDVYSFGALLLELLTGK 197
            R  G   +MAPE          +  ++DV+S G  L+EL TG+
Sbjct: 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 52.9 bits (127), Expect = 5e-08
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 16/112 (14%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SL 145
           EDT  F +S      EI+ A+ +LH    + ++ RD+KP  I+L  +   +L DF L   
Sbjct: 99  EDTACFYLS------EISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKE 149

Query: 146 SIPEGE-THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           SI EG  TH        GT  +MAPE        +  D +S GAL+ ++LTG
Sbjct: 150 SIHEGTVTHT-----FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 52.9 bits (127), Expect = 5e-08
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   +  LH      +V RD+KP  I+L +    ++ D  L++ IPEGET      R
Sbjct: 108 AAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET---IRGR 161

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           V GT G+MAPE      ++   D +  G L+ E++ GK
Sbjct: 162 V-GTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 52.9 bits (127), Expect = 5e-08
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +I S +AYLH    R +V RDIKP+ +++      ++ DF +S  + +     N S 
Sbjct: 173 VARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS- 228

Query: 159 RVIGTFGFMAPEYRTTGDFSE------KSDVYSFGALLLELLTGK 197
             +GT  +M+PE R   D +         D++S G  +LE   G+
Sbjct: 229 --VGTIAYMSPE-RINTDLNHGAYDGYAGDIWSLGVSILEFYLGR 270

Length = 353

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 52.8 bits (127), Expect = 5e-08
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KI+I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 103 KISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 155

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      ++ +SD++S G  L+E+  G+
Sbjct: 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 52.2 bits (125), Expect = 5e-08
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 6/119 (5%)

Query: 84  MKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFT 142
           +K  +    +++KL  +A +IA  +A++     +  + RD++   I++ E    ++ DF 
Sbjct: 91  LKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFG 147

Query: 143 LSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           L+  I + E    +  +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 148 LARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPY 204

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 52.3 bits (125), Expect = 6e-08
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK ++++  A+ YL    +   V RD+    +++ E+NVA++ DF L+       +   D
Sbjct: 105 LKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQD 157

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           + ++     + APE      FS KSDV+SFG LL E+ +  ++ Y
Sbjct: 158 TGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 52.4 bits (125), Expect = 7e-08
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 7/100 (7%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   +AYL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 107 KVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 159

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+EL  G+
Sbjct: 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR 199

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 52.1 bits (125), Expect = 7e-08
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K   +I   V YLH   S  +V RDIK   I+       +L DF  S  +    +     
Sbjct: 108 KYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGM 164

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             V GT  +M+PE  +   +  K+DV+S G  ++E+LT K
Sbjct: 165 KSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 108 AYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFM 167
            YLH   S   + RDIK   I+L EE  A+L DF +S  +      +   N VIGT  +M
Sbjct: 113 EYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQL---TDTMAKRNTVIGTPFWM 166

Query: 168 APEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           APE      ++ K+D++S G   +E+  GK
Sbjct: 167 APEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 51.9 bits (124), Expect = 9e-08
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 7/98 (7%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   +  LH       V RD+KP  I+L +    ++ D  L++ IPEGE+      R
Sbjct: 108 AAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES---IRGR 161

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           V GT G+MAPE      ++   D +  G L+ E++ G+
Sbjct: 162 V-GTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 51.5 bits (123), Expect = 1e-07
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 118 VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDF 177
           +V RD+KP  I+L +    ++ D  L++ IPEGET      RV GT G+MAPE      +
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET---VRGRV-GTVGYMAPEVINNEKY 178

Query: 178 SEKSDVYSFGALLLELLTGK 197
           +   D +  G L+ E++ G+
Sbjct: 179 TFSPDWWGLGCLIYEMIQGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 107 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 163

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 164 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 204

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 92  FSVSKLKIAI-EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           F+ S++++ I EI  A+ +LH      ++ RDIK   I+L  E    L DF LS      
Sbjct: 102 FTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158

Query: 151 ETHINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTG 196
           E     +    GT  +MAPE    G     +  D +S G L  ELLTG
Sbjct: 159 EE--ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 43/190 (22%), Positives = 72/190 (37%), Gaps = 37/190 (19%)

Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           S   L   ++IA  ++YL     + +V RD+    ++++     ++ DF L+  +   E 
Sbjct: 108 SQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164

Query: 153 HIN-DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
             + +  +V     +MA E      ++ KSDV+S+G  + EL+T     Y          
Sbjct: 165 EYHAEGGKV--PIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY---------- 212

Query: 212 RLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT----ELAFKCLSESEGDR 267
                     E     EI D    GE  L  P       ICT     +  KC       R
Sbjct: 213 ----------EGIPAVEIPDLLEKGER-LPQPP------ICTIDVYMVLVKCWMIDAESR 255

Query: 268 PTIVQVAKQL 277
           PT  ++  + 
Sbjct: 256 PTFKELINEF 265

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 40/202 (19%)

Query: 8   RKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPI----RSF-SADELKTATDDFDGGKV 62
           +K++ K ++ K ++    +LL+      N KH  +     SF +AD+L    D  +GG+ 
Sbjct: 30  KKAILKKKEEKHIMSERNVLLK------NVKHPFLVGLHFSFQTADKLYFVLDYINGGE- 82

Query: 63  IMKCLFYKLYKG--FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
               LFY L +   FL+ R     +F             A EIASA+ YLH   S  +V 
Sbjct: 83  ----LFYHLQRERCFLEPRA----RF------------YAAEIASALGYLH---SLNIVY 119

Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+KP  I+L  +    L DF L     E   H   ++   GT  ++APE      +   
Sbjct: 120 RDLKPENILLDSQGHIVLTDFGLC---KENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRT 176

Query: 181 SDVYSFGALLLELLTGKKISYS 202
            D +  GA+L E+L G    YS
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYS 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           +  I+I   +A+LH   S+ ++ RDIK   + L   +  ++ D  ++  +     + N +
Sbjct: 105 RFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLL---SDNTNFA 158

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N ++GT  +++PE      ++EKSDV++ G +L E  TGK
Sbjct: 159 NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGK 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +  E+   + YLH   S+ V+ RDIK   I+L ++   +L DF  +  + + ++     N
Sbjct: 121 VCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK---RN 174

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            V+GT  +MAPE     D+  K D++S G + +E+  G
Sbjct: 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI-NDSNR- 159
           +I   + YLH   +R ++ RDIK   I++  +   ++ DF +S  +         +  R 
Sbjct: 114 QILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARP 170

Query: 160 -VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            + G+  +MAPE      ++ K+D++S G L++E+LTGK
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           +   E+   V  LH    R ++ RDIKP  +++ +    +L DF LS +  E       +
Sbjct: 101 QYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-------N 150

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            + +GT  ++APE        + SD +S G ++ E L G
Sbjct: 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 50.0 bits (119), Expect = 3e-07
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 46/239 (19%)

Query: 44  SFSAD-ELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIE 102
           SF  D EL    +  D G +     ++K  K  + +R +                K  ++
Sbjct: 70  SFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTV---------------WKYFVQ 114

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           + SAV ++H   SR V+ RDIKP  + +    V +L D  L        T    ++ ++G
Sbjct: 115 LCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA---AHSLVG 168

Query: 163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE 222
           T  +M+PE      ++ KSD++S G LL E+   +   Y      G+   L  L +K IE
Sbjct: 169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY------GDKMNLFSLCQK-IE 221

Query: 223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI---VQVAKQLR 278
              +     P +  E    + EK +      EL   C+      RP I    Q+AKQ+ 
Sbjct: 222 QCDY-----PPLPTEH---YSEKLR------ELVSMCIYPDPDQRPDIGYVHQIAKQMH 266

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           +I I++   +  LH    + ++ RD+K   I+L   ++ ++ D  +S  + +        
Sbjct: 107 RIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA----- 158

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
              IGT  +MAPE      +S KSD++S G LL E+ T  
Sbjct: 159 KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSLSIP----EGETHI 154
           ++  A+A  H   ++ +V RD+KP  I++ +  V   A++ DF +   +P         +
Sbjct: 87  QVLDALACAH---NQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATL 143

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI 199
             +  V+GT  + APE       +  SD+Y++G + LE LTG+++
Sbjct: 144 TRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRV 188

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 50.0 bits (119), Expect = 4e-07
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 6/103 (5%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A E+ASA+ YLH   S  ++ RD+KP  I+L  +    L DF L     EG      ++ 
Sbjct: 102 AAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLC---KEGVEPEETTST 155

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
             GT  ++APE      +    D +  GA+L E+L G    YS
Sbjct: 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 49.8 bits (119), Expect = 5e-07
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L IAI+IA+ + YL    S   V RD+     ++ E    ++ DF LS  I   + +   
Sbjct: 127 LHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQ 183

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLEL 193
           S  ++    +M PE    G F+ +SD++SFG +L E+
Sbjct: 184 SKSLL-PVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
            +++A EIA  +AYL    ++  V RD+     ++ E+   ++ DF ++  I E + +  
Sbjct: 121 FIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRK 177

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               ++    +MAPE    G F+ KSDV+SFG +L E+ T
Sbjct: 178 GGKGLL-PVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 49.3 bits (117), Expect = 6e-07
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 12/122 (9%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K  +++ SA+ ++H   SR V+ RDIKP  + +    V +L D  L        T    +
Sbjct: 110 KYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA---A 163

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV 217
           + ++GT  +M+PE      ++ KSD++S G LL E+   +   Y      G+   L  L 
Sbjct: 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY------GDKMNLYSLC 217

Query: 218 KK 219
           KK
Sbjct: 218 KK 219

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 15/103 (14%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSIPEGETHINDSNR 159
           E    +AYLH      V+ RDIK   I+L +    +L DF +S  L    G       N 
Sbjct: 121 ETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRR-----NT 172

Query: 160 VIGTFGFMAPE-----YRTTGDFSEKSDVYSFGALLLELLTGK 197
            IGT  +MAPE      +    +  +SDV+S G   +EL  GK
Sbjct: 173 FIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGK 215

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 24/138 (17%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSNRVI 161
           +  A  YLH   +R ++ RD+KP  ++L      +L DF  +  +  G+ T         
Sbjct: 102 VVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT-----FC 153

Query: 162 GTFGFMAPE------YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
           GT  ++APE      Y    DFS   D +S G LL ELLTG +  +    DD +   + +
Sbjct: 154 GTPEYVAPEIILNKGY----DFS--VDYWSLGILLYELLTG-RPPFGE--DDEDPMEIYN 204

Query: 216 LVKKYIENESFKEIVDPA 233
            + K      F   +D A
Sbjct: 205 DILKGNGKLEFPNYIDKA 222

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 49.3 bits (117), Expect = 6e-07
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 5/100 (5%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +IA  +AY+     +  + RD++   +++ E  + ++ DF L+  I + E    +  +  
Sbjct: 111 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF- 166

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
               + APE    G F+ KSDV+SFG LL E++T  KI Y
Sbjct: 167 -PIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPY 205

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 49.2 bits (117), Expect = 7e-07
 Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 33/181 (18%)

Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++IA A+ YLH    + ++ RD+K   + L   N+ ++ D  ++  +   E   + ++ +
Sbjct: 109 VQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVL---ENQCDMASTL 162

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY 220
           IGT  +M+PE  +   ++ KSDV++ G  + E+ T K      H  + +D  +  LV + 
Sbjct: 163 IGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK------HAFNAKD--MNSLVYRI 214

Query: 221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI 280
           IE             G+   M  +   +L    EL    LS+    RP++  +   LRQ 
Sbjct: 215 IE-------------GKLPPMPKDYSPEL---GELIATMLSKRPEKRPSVKSI---LRQP 255

Query: 281 Y 281
           Y
Sbjct: 256 Y 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 48.9 bits (116), Expect = 7e-07
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 5/105 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +A +IA  +AY+        + RD++   I++ +  V ++ DF L+  I + E     
Sbjct: 105 VDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ 161

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL EL+T  ++ Y
Sbjct: 162 GAKF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 204

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           I++  AV ++H   S+ ++ RDIK   I+L    + +L DF  S       T  +D  R 
Sbjct: 150 IQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMY--AATVSDDVGRT 204

Query: 161 I-GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
             GT  ++APE      +S+K+D++S G LL ELLT K+
Sbjct: 205 FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKR 243

Length = 496

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 48.9 bits (116), Expect = 8e-07
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  + +IA  +A++     R  + RD++   I++    V ++ DF L+  I + E    +
Sbjct: 105 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 161

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL+E++T  +I Y
Sbjct: 162 GAKF--PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 204

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 49.1 bits (117), Expect = 8e-07
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 12/102 (11%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND- 156
           +IA+ +   + YL   +S  ++ RD+KP+ +++      +L DF +S  +      +N  
Sbjct: 99  RIAVAVVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQL------VNSI 149

Query: 157 SNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGK 197
           +   +GT  +MAPE R +G+ +   SDV+S G   +EL  G+
Sbjct: 150 AKTYVGTNAYMAPE-RISGEQYGIHSDVWSLGISFMELALGR 190

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 48.8 bits (116), Expect = 8e-07
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A ++A+ +AY+        + RD++   I++ +  V ++ DF L+  I + E       
Sbjct: 107 MAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL+T  ++ Y
Sbjct: 164 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 204

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 48.8 bits (116), Expect = 8e-07
 Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 11/123 (8%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + +LH   S  +V RD+KP  ++L ++   +L D  L++ + +G+T      +  
Sbjct: 103 QITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT----ITQRA 155

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI 221
           GT G+MAPE      +S   D ++ G  + E++ G+    +   D  E    ++L ++ +
Sbjct: 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR----TPFKDHKEKVAKEELKRRTL 211

Query: 222 ENE 224
           E+E
Sbjct: 212 EDE 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 51/216 (23%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKI-AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE 133
           +L+ R              VS LK  A ++A  +AYL    S+  V RD+    ++L   
Sbjct: 85  YLKKRRE----------IPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNR 131

Query: 134 NVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLEL 193
           + A++ DF +S ++  G  +   +        + APE    G FS KSDV+S+G  L E 
Sbjct: 132 HQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEA 191

Query: 194 LT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG--EEGLMWPEKEQQLL 250
            + G K                           + E+    ++   E G   P  E+   
Sbjct: 192 FSYGAK--------------------------PYGEMKGAEVIAMLESGERLPRPEE--- 222

Query: 251 ICTE----LAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
            C +    +   C      DRPT  ++    R+  +
Sbjct: 223 -CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDPE 257

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHINDSNRV 160
           E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I PE     +  + +
Sbjct: 123 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----SKRSTM 175

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV- 160
           E+  A+ Y+H      V+ RDIK   I++      +L DF ++  +     + N S R  
Sbjct: 109 EVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALL-----NQNSSKRST 160

Query: 161 -IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTG 196
            +GT  +MAPE  T G  +  K+D++S G  + E+ TG
Sbjct: 161 FVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 107 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 159

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 4/106 (3%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L+++++ A+ + YL    S+  + RD+     ++ E NV ++ DF +S     G   ++D
Sbjct: 96  LQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
             + I    + APE    G ++ +SDV+S+G LL E  +     Y 
Sbjct: 153 GLKQI-PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYP 197

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 13/122 (10%)

Query: 88  DTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS 146
                ++S+L +IA++IAS + YL    S+  V RD+     ++  + V ++ DF +S  
Sbjct: 115 PMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRD 171

Query: 147 IPEGETHINDSNRVIGT----FGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
           +     +  D  RV G       +M PE      F+ +SDV+SFG +L E+ T  K  + 
Sbjct: 172 V-----YTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226

Query: 203 SH 204
             
Sbjct: 227 GL 228

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 103 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 158

Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           +   +        + APE      FS KSDV++FG LL E+ T
Sbjct: 159 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 31/143 (21%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI  A+ YLH   S+ +V RD+KP  I+L +E   +L DF  +  +       + +  
Sbjct: 107 ASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKL------RDRTWT 157

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK------------------KISY 201
           + GT  ++APE   +   ++  D ++ G L+ E+L G                   K+ +
Sbjct: 158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEF 217

Query: 202 SSHFDDGEDYRLQDLVKKYIENE 224
             H     D   +DL+KK +  +
Sbjct: 218 PRHL----DLYAKDLIKKLLVVD 236

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)

Query: 62  VIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSR 121
           VI +   Y     FL+ +  S +  ED   FS        ++A  +A+L    S+  + R
Sbjct: 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSY-------QVAKGMAFLA---SKNCIHR 165

Query: 122 DIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF-----MAPEYRTTGD 176
           D+    ++L    + ++ DF L+  I      +NDSN V+          MAPE      
Sbjct: 166 DLAARNVLLTHGKIVKICDFGLARDI------MNDSNYVVKGNARLPVKWMAPESIFNCV 219

Query: 177 FSEKSDVYSFGALLLELLT 195
           ++ +SDV+S+G LL E+ +
Sbjct: 220 YTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           I  E+   + YLH       + RDIK   I+L EE   +L DF +S     G+     S 
Sbjct: 103 ILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVS-----GQLTSTMSK 154

Query: 159 R--VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           R   +GT  +MAPE      + EK+D++S G   +EL  G+
Sbjct: 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK A++I   + YL    SR  V RD+    ++++ E+  ++ DF L+ +I   + +   
Sbjct: 112 LKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTV 168

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
            + +     + APE      F   SDV+SFG  L ELLT      S
Sbjct: 169 KDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESS 214

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 34/185 (18%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSIPEGETHIN 155
           K  +++ SA+ ++H   S+ ++ RDIKP  + +    V +L D  L    S      H  
Sbjct: 110 KYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH-- 164

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
               ++GT  +M+PE      ++ KSD++S G LL E+   +   Y      G+   L  
Sbjct: 165 ---SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY------GDKMNLYS 215

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP---TIVQ 272
           L KK IE   +  +  PA    E L             +L  +C++     RP    ++Q
Sbjct: 216 LCKK-IEKCDYPPL--PADHYSEEL------------RDLVSRCINPDPEKRPDISYVLQ 260

Query: 273 VAKQL 277
           VAK++
Sbjct: 261 VAKEM 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +  ++  A+ YL    S   + RD+     ++ E+NV ++ DF L+  + + +   + 
Sbjct: 103 LDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      +  PE      FS KSDV+SFG L+ E+ +  K+ Y
Sbjct: 160 GTKF--PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPY 202

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 47.3 bits (112), Expect = 4e-06
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI SA+ YLH   SR VV RDIK   ++L ++   ++ DF L     EG +         
Sbjct: 103 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFC 156

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
           GT  ++APE     D+    D +  G ++ E++ G+   Y+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 46.9 bits (111), Expect = 4e-06
 Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 86  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 142

Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++  +   ++ DF ++  I E + +      ++     MAPE    G F+  
Sbjct: 143 RDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW-MAPESLKDGVFTTS 201

Query: 181 SDVYSFGALLLELLT 195
           SD++SFG +L E+ +
Sbjct: 202 SDMWSFGVVLWEITS 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
            ++K   +FP  V +L    +I   + YLH    R  V RDIK   I++    V +L DF
Sbjct: 91  KLLKKYGSFPEPVIRLYTR-QILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADF 146

Query: 142 TLSLSIPEGETHINDSNRVIGTFGFMAPEY-RTTGDFSEKSDVYSFGALLLELLTGK 197
            ++  + E       +    G+  +MAPE     G +   +D++S G  +LE+ TGK
Sbjct: 147 GMAKQVVEFSF----AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 15/133 (11%)

Query: 87  EDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
           ED++P  +  L + + ++A  + +L    S+  + RD+    ++L +  VA++ DF L+ 
Sbjct: 204 EDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLAR 260

Query: 146 SIPEGETHINDSNRVIG-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKIS 200
            I      +NDSN V+         +MAPE      ++ +SDV+S+G LL E+ +  K  
Sbjct: 261 DI------MNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSP 314

Query: 201 YSSHFDDGEDYRL 213
           Y     + + Y++
Sbjct: 315 YPGILVNSKFYKM 327

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.9 bits (111), Expect = 4e-06
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT 174
           SR  + RD+    I+L E NV ++ DF L+  I +   ++   +  +    +MAPE    
Sbjct: 192 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL-PLKWMAPESIFD 250

Query: 175 GDFSEKSDVYSFGALLLELLT 195
             ++ +SDV+SFG LL E+ +
Sbjct: 251 KVYTTQSDVWSFGVLLWEIFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 26/96 (27%), Positives = 54/96 (56%), Gaps = 14/96 (14%)

Query: 106 AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF----TLSLSIPEGETHINDSNRVI 161
           A+++LH   ++ V+ RDIK  +I+L  +   +L DF     +S  +P  ++       ++
Sbjct: 127 ALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKS-------LV 176

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)

Query: 80  PISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF 139
           P   + F+D        +  A ++A  + YL    S+  + RD+    +++ E+NV ++ 
Sbjct: 133 PEEQLSFKDL-------VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIA 182

Query: 140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           DF L+  I   + +   +N  +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 183 DFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 12/130 (9%)

Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIE--------IASAVAYLHVGFSRPVVSRDIKP 125
           GF++++ +S ++ E+     + K  + +E        +A  + +L    SR  + RD+  
Sbjct: 151 GFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAA 207

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYS 185
             I+L E NV ++ DF L+  I +   ++   +  +    +MAPE      ++ +SDV+S
Sbjct: 208 RNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWS 266

Query: 186 FGALLLELLT 195
           FG LL E+ +
Sbjct: 267 FGVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 46.8 bits (111), Expect = 5e-06
 Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I S + +LH    R ++ RD+KP  ++L  +   ++ D  L++ + +G+   + +    
Sbjct: 105 QIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ---SKTKGYA 158

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT GFMAPE     ++    D ++ G  L E++  +
Sbjct: 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 7/107 (6%)

Query: 89  TFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP 148
           +F   VS    A ++A  + YL    SR  + RD+    +++ E+NV ++ DF L+  + 
Sbjct: 132 SFKDLVS---CAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVH 185

Query: 149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           + + +   SN  +    +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 186 DIDYYKKTSNGRL-PVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 72  YKGFLQDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           Y G   +R  S +   D    ++  L   A +I+  + YL       +V RD+    +++
Sbjct: 104 YLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLV 160

Query: 131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALL 190
            E    ++ DF LS  + E ++++  S   I    +MA E      ++ +SDV+SFG LL
Sbjct: 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLL 219

Query: 191 LELLT 195
            E++T
Sbjct: 220 WEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 46.7 bits (111), Expect = 5e-06
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 20/103 (19%)

Query: 101 IEIA-------SAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH 153
           +EIA         +AYLH   S   + RDIK   I+L E    +L DF  S S+      
Sbjct: 115 VEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFG-SASL------ 164

Query: 154 INDSNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLEL 193
           ++ +N  +GT  +MAPE       G +  K DV+S G   +EL
Sbjct: 165 VSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 46.6 bits (110), Expect = 5e-06
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 11/125 (8%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI+ A+ YLH    R ++ RD+K   ++L  E   +L D+ +     EG    + ++   
Sbjct: 104 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSTFC 157

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK----ISYSSHFD-DGEDYRLQDL 216
           GT  ++APE     D+    D ++ G L+ E++ G+     +  S + D + EDY  Q +
Sbjct: 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 217

Query: 217 VKKYI 221
           ++K I
Sbjct: 218 LEKQI 222

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIE--------IASAVAYLHVGFSRPVVSRDIKP 125
           GF++D+ +S ++ ED     + K  + +E        +A  + +L    SR  + RD+  
Sbjct: 146 GFIEDKSLSDVE-EDEEGDELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAA 201

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHI-NDSNRVIGTFGFMAPEYRTTGDFSEKSDVY 184
             I+L E NV ++ DF L+  I +   ++     R+     +MAPE      ++ +SDV+
Sbjct: 202 RNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPESIFDKVYTTQSDVW 259

Query: 185 SFGALLLELLT 195
           SFG LL E+ +
Sbjct: 260 SFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 13/117 (11%)

Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS 144
           +FE+      ++     ++   +AYLH   S+ ++ RD+K   +++  + + ++ DF +S
Sbjct: 104 RFEEQLVRFFTE-----QVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGIS 155

Query: 145 LSIPEGETHINDSNRVI-GTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKK 198
                 + + ND N  + G+  +MAPE   +    +S K D++S G ++LE+  G++
Sbjct: 156 KK--SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 46.6 bits (110), Expect = 6e-06
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           +  A+ YLH   S+ V+ RDIK  +I+L  +   +L DF     I +    +     ++G
Sbjct: 126 VLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK---DVPKRKSLVG 179

Query: 163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
           T  +MAPE  +   +  + D++S G +++E++ G+   +S
Sbjct: 180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFS 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 45.9 bits (108), Expect = 8e-06
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I   ++     + ++
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMV 177

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSNR 159
           +++A  + YL    S+  V RD+     +L E    ++ DF L+  I + E + +++   
Sbjct: 105 LQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTG 161

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                 +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 162 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 45.8 bits (108), Expect = 9e-06
 Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++YLH   ++ V+ RDIK  +I+L  +   +L DF     + +    +    
Sbjct: 123 VCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK---EVPKRK 176

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 45.6 bits (108), Expect = 9e-06
 Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLSIPEGETHIND-SNR 159
           ++   ++YLH      ++ RD+K   +++       ++ DF  +  +    T   +   +
Sbjct: 111 QLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQ 167

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           ++GT  FMAPE      +    DV+S G +++E+ T K
Sbjct: 168 LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L IAI+IA+ + YL   F    V +D+    I++ E+   ++ D  LS  I   + +   
Sbjct: 127 LHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQ 183

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
              ++    +M PE    G FS  SD++SFG +L E+ +
Sbjct: 184 PKSLL-PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 108 AYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSNRVIGTFGF 166
           AYLH       + RDIK   I+L E+   +L DF +S  +    T  I      IGT  +
Sbjct: 115 AYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQL----TATIAKRKSFIGTPYW 167

Query: 167 MAPEY---RTTGDFSEKSDVYSFGALLLEL 193
           MAPE       G +  K D+++ G   +EL
Sbjct: 168 MAPEVAAVERKGGYDGKCDIWALGITAIEL 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 14/137 (10%)

Query: 92  FSVSKLKIAI-EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           F   +++I   EI  A+ +LH      ++ RDIK   I+L       L DF LS    E 
Sbjct: 102 FKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158

Query: 151 ETHINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFD-D 207
           E     +    GT  +MAP+    GD    +  D +S G L+ ELLTG     +S F  D
Sbjct: 159 EVE--RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG-----ASPFTVD 211

Query: 208 GEDYRLQDLVKKYIENE 224
           GE     ++ ++ +++E
Sbjct: 212 GEKNSQAEISRRILKSE 228

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E    +L DF ++  + + +      N  +
Sbjct: 109 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFV 162

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE      +  K+D++S G   +EL  G+
Sbjct: 163 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 6/103 (5%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E+   +L DF ++  + + +      N  +
Sbjct: 109 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---KRNTFV 162

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
           GT  +MAPE      +  K+D++S G   +EL  G+  +   H
Sbjct: 163 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 205

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 14/118 (11%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           FP  V+K   A E+  A  YLH   S+ ++ RD+KP  ++L  +   ++ DF  +  +P+
Sbjct: 115 FPNDVAKFYHA-ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170

Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
                  +  + GT  ++APE   +    +  D ++ G LL E + G    Y   FDD
Sbjct: 171 ------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG----YPPFFDD 218

Length = 329

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 37/96 (38%), Positives = 45/96 (46%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI  A+ +LH      +V RDIK   I+L  E    L DF LS      E     S    
Sbjct: 113 EIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYS--FC 167

Query: 162 GTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  +MAPE  R  G   +  D +S G L+ ELLTG
Sbjct: 168 GTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTG 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 45.1 bits (106), Expect = 2e-05
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I   ++     + ++
Sbjct: 123 ECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMV 176

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++ LH   ++ V+ RDIK  +I+L  +   +L DF     + +    +    
Sbjct: 121 VCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK---EVPRRK 174

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 5/106 (4%)

Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+ K+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 115 PPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 171

Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 172 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 216

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 13/124 (10%)

Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL 143
           KFED  P  +++  +A E+  A+  +H +G+    V RDIKP  ++L +    +L DF  
Sbjct: 94  KFEDRLPEDMARFYLA-EMVLAIDSVHQLGY----VHRDIKPDNVLLDKNGHIRLADFGS 148

Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEY-----RTTGDFSEKSDVYSFGALLLELLTGKK 198
            L +    T    SN  +GT  +++PE         G +  + D +S G  + E+L G+ 
Sbjct: 149 CLRLLADGT--VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGET 206

Query: 199 ISYS 202
             Y+
Sbjct: 207 PFYA 210

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  +   + +   +N 
Sbjct: 140 AYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNG 196

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 197 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 21/128 (16%)

Query: 85  KFEDTFP-----FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF 139
           KFED  P     F ++++ IAI+    + Y+H         RDIKP  I++      +L 
Sbjct: 94  KFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLA 144

Query: 140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELL 194
           DF   L + E  T    S+  +GT  +++PE         G +  + D +S G  + E+L
Sbjct: 145 DFGSCLKLMEDGT--VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEML 202

Query: 195 TGKKISYS 202
            G+   Y+
Sbjct: 203 YGETPFYA 210

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E   A+ +LH   +  V+ RDIK   ++L  +   +L DF     I   ++     + ++
Sbjct: 123 ECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS---KRSTMV 176

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 44.3 bits (104), Expect = 3e-05
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E+   +L DF ++  + + +      N  +
Sbjct: 109 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---KRNTFV 162

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE      +  K+D++S G   +EL  G+
Sbjct: 163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 32/137 (23%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
           +D FP   ++  IA E+  A+  +H +GF    + RDIKP  I++  +   +L DF L  
Sbjct: 95  KDVFPEETARFYIA-ELVLALDSVHKLGF----IHRDIKPDNILIDADGHIKLADFGLCK 149

Query: 146 SIPEGETHINDSNR--------------------------VIGTFGFMAPEYRTTGDFSE 179
            + + +      N                            +GT  ++APE      +  
Sbjct: 150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGL 209

Query: 180 KSDVYSFGALLLELLTG 196
           + D +S G +L E+L G
Sbjct: 210 ECDWWSLGVILYEMLYG 226

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 44.3 bits (104), Expect = 3e-05
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI SA+ YLH G    +V RD+K   ++L ++   ++ DF L     EG T         
Sbjct: 103 EIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLC---KEGITDAATMKTFC 156

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++APE     D+    D +  G ++ E++ G+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 10/111 (9%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   + +LH    + ++ RD+K   ++L ++   ++ DF +      GE     ++ 
Sbjct: 102 AAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---GKAST 155

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED 210
             GT  ++APE      ++E  D +SFG LL E+L G+    S    + ED
Sbjct: 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ----SPFHGEDED 202

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 28/181 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL    S  V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 103 LGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             +      + +PE  +   +S KSDV+SFG L+ E+ +  K  Y               
Sbjct: 160 GTKF--PVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPY--------------- 202

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                EN S  E+V+    G   L  P    Q +   EL   C  E   DRP+   +  Q
Sbjct: 203 -----ENRSNSEVVETINAGFR-LYKPRLASQSVY--ELMQHCWKERPEDRPSFSLLLHQ 254

Query: 277 L 277
           L
Sbjct: 255 L 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 11/123 (8%)

Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS 144
           KFED  P  +++  IA E+  A+  +H       V RDIKP  ++L      +L DF   
Sbjct: 94  KFEDRLPEDMARFYIA-EMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSC 149

Query: 145 LSIPEGETHINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKI 199
           L + +  T    S+  +GT  +++PE         G +  + D +S G  + E+L G+  
Sbjct: 150 LKMNQDGT--VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207

Query: 200 SYS 202
            Y+
Sbjct: 208 FYA 210

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +K A++ A+ +AYL    S+  + RD+     ++ E NV ++ DF +S    +G    + 
Sbjct: 96  VKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG 152

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
             ++     + APE    G +S +SDV+S+G LL E  +
Sbjct: 153 LKQI--PIKWTAPEALNYGRYSSESDVWSYGILLWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 43.7 bits (103), Expect = 5e-05
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 95  SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI 154
            +L IA ++A+ +AYL     R  V RD+     ++ E  V ++ DF LS +I   + + 
Sbjct: 131 EQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 187

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
              N  I    +M PE      ++ +SDV+++G +L E+ +
Sbjct: 188 ASENDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 43.8 bits (103), Expect = 5e-05
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   + +LH   S+ +V RD+K   I+L  +   ++ DF +      G+     +  
Sbjct: 102 AAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK---TCT 155

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             GT  ++APE      ++   D +SFG LL E+L G+
Sbjct: 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  +   + +   +N  +
Sbjct: 145 QVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRL 201

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 202 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L IA +IAS + YL    S   V RD+     ++ +  V ++ DF +S  I     +  D
Sbjct: 125 LAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-----YSTD 176

Query: 157 SNRVIG----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISY 201
             RV G       +M PE      F+ +SD++SFG +L E+ T GK+  Y
Sbjct: 177 YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 31/152 (20%)

Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           +++M+ L Y   + +LQ       K  +        L  A +I   + YL    S+  V 
Sbjct: 83  RLVMEYLPYGSLRDYLQ-------KHRERLDHR-KLLLYASQICKGMEYLG---SKRYVH 131

Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPE----------GETHINDSNRVIGTFGFMAPE 170
           RD+    I+++ EN  ++ DF L+  +P+          GE+ I         F + APE
Sbjct: 132 RDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPI---------FWY-APE 181

Query: 171 YRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
             T   FS  SDV+SFG +L EL T    S S
Sbjct: 182 SLTESKFSVASDVWSFGVVLYELFTYSDKSCS 213

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 43.5 bits (102), Expect = 6e-05
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 11/103 (10%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           I  EI   +A+LH      V+ RDIK   ++L E    +L DF +S  +   +  +   N
Sbjct: 126 ICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRN 179

Query: 159 RVIGTFGFMAPEY-----RTTGDFSEKSDVYSFGALLLELLTG 196
             IGT  +MAPE           +  +SD++S G   +E+  G
Sbjct: 180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 32/125 (25%), Positives = 68/125 (54%), Gaps = 15/125 (12%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEE 133
           ++Q R  S++  EDT       L   ++I  A+ ++H   ++ ++ RD+K   I+L + +
Sbjct: 89  YIQKRCNSLLD-EDTI------LHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHK 138

Query: 134 NVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLEL 193
            V ++ DF +S  +       + +  V+GT  +++PE      +++KSD+++ G +L EL
Sbjct: 139 MVVKIGDFGISKILSSK----SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYEL 194

Query: 194 LTGKK 198
            + K+
Sbjct: 195 ASLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 91  PFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           PFS S++K + +++   + YLH  F   ++ RD+K + ++L ++   ++ DF L+ +   
Sbjct: 104 PFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY-- 158

Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKS-DVYSFGALLLELLTGK 197
                      + T  + APE          + D+++ G +L ELL  K
Sbjct: 159 -GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 43.5 bits (102), Expect = 7e-05
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT 174
           SR ++ RD+K   I L    + +L DF  S    +    ++ ++   GT  ++APE    
Sbjct: 187 SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD-SVSLDVASSFCGTPYYLAPELWER 245

Query: 175 GDFSEKSDVYSFGALLLELLT 195
             +S+K+D++S G +L ELLT
Sbjct: 246 KRYSKKADMWSLGVILYELLT 266

Length = 478

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 43.3 bits (102), Expect = 7e-05
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI SA+ YLH   S  VV RD+K   ++L ++   ++ DF L     EG +         
Sbjct: 103 EIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFC 156

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
           GT  ++APE     D+    D +  G ++ E++ G+   Y+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 23/141 (16%)

Query: 63  IMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRD 122
           +M     K YK             +   P  +   KIA+    A+ YL       ++ RD
Sbjct: 84  LMDISLDKFYK-------YVYEVLKSVIPEEILG-KIAVATVKALNYLKEELK--IIHRD 133

Query: 123 IKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS---NRVIGTFGFMAPEYRTTGD--- 176
           +KP+ I+L      +L DF +S         + DS    R  G   +MAPE         
Sbjct: 134 VKPSNILLDRNGNIKLCDFGIS-------GQLVDSIAKTRDAGCRPYMAPERIDPSARDG 186

Query: 177 FSEKSDVYSFGALLLELLTGK 197
           +  +SDV+S G  L E+ TGK
Sbjct: 187 YDVRSDVWSLGITLYEVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 42.8 bits (100), Expect = 8e-05
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           I  EI   +++LH      V+ RDIK   ++L E    +L DF +S  +   +  +   N
Sbjct: 116 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRN 169

Query: 159 RVIGTFGFMAPEY-------RTTGDFSEKSDVYSFGALLLELLTG 196
             IGT  +MAPE          T DF  KSD++S G   +E+  G
Sbjct: 170 TFIGTPYWMAPEVIACDENPDATYDF--KSDLWSLGITAIEMAEG 212

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 42.8 bits (101), Expect = 9e-05
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 22/112 (19%)

Query: 166 FMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES 225
           ++APE     DFS KSDV+SFG L+ E+ T  ++ +    D+                  
Sbjct: 184 WLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE------------------ 225

Query: 226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL 277
             E++    +    L  P  E       +L  +C + +  DRP+  ++   L
Sbjct: 226 --EVL--NRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 42.5 bits (100), Expect = 9e-05
 Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++I  A+ ++H    R ++ RDIK   I L ++   +L DF ++  +    + +  +   
Sbjct: 108 VQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVL---NSTVELARTC 161

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           IGT  +++PE      ++ KSD+++ G +L E+ T K
Sbjct: 162 IGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 42.7 bits (100), Expect = 9e-05
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           SV++ K   +I   ++YLH   S  +V RDIK   I+       +L DF  S  +     
Sbjct: 106 SVTR-KYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161

Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
                  V GT  +M+PE  +   +  K+DV+S G  ++E+LT K
Sbjct: 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (101), Expect = 9e-05
 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SL 145
           E  F  S ++   A E+  A+  LH      V+ RD+KP  I+L  +    L DF L  L
Sbjct: 87  EGRFDLSRARFYTA-ELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKL 142

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           ++ + +     +N   GT  ++APE      +++  D ++ G LL E+LTG
Sbjct: 143 NMKDDDK----TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTG 189

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 9e-05
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 24/117 (20%)

Query: 91  PFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSI 147
           P S + +K I  ++   +AY H   S  ++ RD+KP  I++  + V +L DF L+    I
Sbjct: 94  PLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGI 150

Query: 148 PEGETHINDSNRVIGTFGFMAPE-------YRTTGDFSEKSDVYSFGALLLELLTGK 197
           P        ++ V+ T  + APE       Y      S   D++S G +  E++TGK
Sbjct: 151 PL----RTYTHEVV-TLWYRAPEILLGSKHY------STAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 29/209 (13%)

Query: 7   SRKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSAD-ELKTATDDFDGGKVIMK 65
           S+K +   ++    +G   IL+  L+  S        SF  D +L   TD   GG+    
Sbjct: 27  SKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGE---- 82

Query: 66  CLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKP 125
            LF+ L K             E  F    +K  IA E+  A+ +LH      +V RD+KP
Sbjct: 83  -LFWHLQK-------------EGRFSEDRAKFYIA-ELVLALEHLH---KYDIVYRDLKP 124

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPE-YRTTGDFSEKSDVY 184
             I+L       L DF LS +     T    +N   GT  ++APE       +++  D +
Sbjct: 125 ENILLDATGHIALCDFGLSKA---NLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFW 181

Query: 185 SFGALLLELLTGKKISYSSHFDDGEDYRL 213
           S G L+ E+  G    Y+   D  + YR 
Sbjct: 182 SLGVLVFEMCCGWSPFYAE--DTQQMYRN 208

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 27/181 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +++    A+ + YL    S+  + RD+     ++ E+NV ++ DF +S    +G      
Sbjct: 97  IQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             + I    + APE    G +S +SDV+SFG LL E  +   + Y++             
Sbjct: 154 GMKQI-PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYAN------------- 199

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
               + N+  +E +      E+G+  P  E        L  +C     G RP+   V ++
Sbjct: 200 ----LSNQQTREAI------EQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249

Query: 277 L 277
           L
Sbjct: 250 L 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   V+YLH   S  +V RDIK   I+       +L DF  S  I            V 
Sbjct: 114 QILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVT 170

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +M+PE  +   +  K+DV+S    ++E+LT K
Sbjct: 171 GTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 11/93 (11%)

Query: 106 AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFG 165
           A+ +LH   S  V+ RD+K   I+L  +   +L DF +S    + ++ +   +  IGT  
Sbjct: 115 ALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVS---AKNKSTLQKRDTFIGTPY 168

Query: 166 FMAPEYRTTGDFSE-----KSDVYSFGALLLEL 193
           +MAPE      F +     K+D++S G  L+EL
Sbjct: 169 WMAPEVVACETFKDNPYDYKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 24/74 (32%), Positives = 37/74 (50%)

Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS 176

Query: 179 EKSDVYSFGALLLE 192
            KSDV+SFG L+ E
Sbjct: 177 SKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 13/107 (12%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L IA +IAS + YL    S+  V RD+     ++    + ++ DF +S  +     +  D
Sbjct: 126 LHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV-----YSTD 177

Query: 157 SNRVIG----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKK 198
             RV G       +M PE      F+ +SDV+SFG +L E+ T GK+
Sbjct: 178 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 6/120 (5%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
           ++++  +  P  V   K+   I   +  +H      +V RDIKP  +++   +V +L DF
Sbjct: 85  NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDF 144

Query: 142 TLSLSIPEGETHINDSN--RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI 199
             + ++ EG    +++N    + T  + +PE      + +  D++S G +L EL  G+ +
Sbjct: 145 GFARNLSEG----SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPL 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SLSIPEGETHINDSNRV 160
           EI SA+ YLH    + VV RD+K   ++L ++   ++ DF L    I +G T        
Sbjct: 103 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT----MKTF 156

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            GT  ++APE     D+    D +  G ++ E++ G+
Sbjct: 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 22/104 (21%)

Query: 101 IEIAS-------AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGET 152
           +EIA+        +AYLH   S  ++ RDIK   I+L E    +L DF + S S P    
Sbjct: 121 VEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173

Query: 153 HINDSNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLEL 193
               +N  +GT  +MAPE       G +  K DV+S G   +EL
Sbjct: 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 13/128 (10%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SLSIPEGETHINDSN 158
           + EI+ A+ +LH    R ++ RD+K   ++L  E   +L D+ +    I  G+T    ++
Sbjct: 102 SAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT----TS 154

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK----ISYSSHFD-DGEDYRL 213
              GT  ++APE     D+    D ++ G L+ E++ G+     +  S + D + EDY  
Sbjct: 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLF 214

Query: 214 QDLVKKYI 221
           Q +++K I
Sbjct: 215 QVILEKQI 222

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 21/137 (15%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++   + +LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T+   +  V+
Sbjct: 131 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ACTNFMMTPYVV 184

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ EL+ G  I   + H D              
Sbjct: 185 TRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243

Query: 212 ----RLQDLVKKYIENE 224
               RLQ  V+ Y+EN 
Sbjct: 244 EFMNRLQPTVRNYVENR 260

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 20/102 (19%)

Query: 106 AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV----I 161
           A+ Y+H   S  V+ RD+KP+ I+L  +   +L DF L+ S+ E E   N  N V    +
Sbjct: 119 ALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE--ENPENPVLTDYV 173

Query: 162 GTFGFMAPE------YRTTGDFSEKSDVYSFGALLLELLTGK 197
            T  + APE        T G      D++S G +L E+L GK
Sbjct: 174 ATRWYRAPEILLGSTRYTKG-----VDMWSVGCILGEMLLGK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + +L    S+  + RD+    +++ E++V ++ DF L+  I     H  D  R
Sbjct: 138 AYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDI-----HHIDYYR 189

Query: 160 VIGT----FGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                     +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 190 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 19/130 (14%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI  A+ +LH    R ++ RD+K   ++L  +   +L D+ +     EG    + ++ 
Sbjct: 102 AAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMC---KEGLGPGDTTST 155

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD--------DGEDY 211
             GT  ++APE     ++    D ++ G L+ E++ G+     S FD        + EDY
Sbjct: 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR-----SPFDIITDNPDMNTEDY 210

Query: 212 RLQDLVKKYI 221
             Q +++K I
Sbjct: 211 LFQVILEKPI 220

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 22/104 (21%)

Query: 101 IEIAS-------AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGET 152
           +EIA+        +AYLH   S  ++ RDIK   I+L E    +L DF + S++ P    
Sbjct: 125 VEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177

Query: 153 HINDSNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLEL 193
               +N  +GT  +MAPE       G +  K DV+S G   +EL
Sbjct: 178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 47/194 (24%), Positives = 75/194 (38%), Gaps = 42/194 (21%)

Query: 92  FSVSKL-KIAIEIASAVAYL-HVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           F+V +L  +   IAS + YL  + +    V RD+    I++    V ++ DF LS     
Sbjct: 103 FTVGQLVGMLRGIASGMKYLSEMNY----VHRDLAARNILVNSNLVCKVSDFGLS----- 153

Query: 150 GETHINDSNRVIGTFG------FMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS 203
               + DS     T G      + APE      F+  SDV+SFG ++ E+++  +  Y  
Sbjct: 154 --RRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPY-- 209

Query: 204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSES 263
                 D   QD++K                  E+G   P          +L   C  + 
Sbjct: 210 -----WDMSNQDVIKAV----------------EDGYRLPPPMDCPSALYQLMLDCWQKD 248

Query: 264 EGDRPTIVQVAKQL 277
             +RPT  Q+   L
Sbjct: 249 RNERPTFSQIVSTL 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 15/102 (14%)

Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHINDSNR 159
           ++I+  + ++H    R ++ RDIK   I L +   VA+L DF ++  +       NDS  
Sbjct: 108 VQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL-------NDSME 157

Query: 160 V----IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +    +GT  +++PE      ++ K+D++S G +L EL T K
Sbjct: 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLK 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
             S +  + ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + +   
Sbjct: 106 LASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162

Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKK 198
           +     ++     +MAPE      F+  SDV+ FG  + E+L  G K
Sbjct: 163 YKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVK 207

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   V+YLH   S  +V RDIK   I+       +L DF  S  +            V 
Sbjct: 114 QILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVT 170

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +M+PE  +   +  K+D++S G  ++E+LT K
Sbjct: 171 GTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 16/130 (12%)

Query: 80  PISVMKFEDTFPFSVSK---LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA 136
           P +V+  E   P  +++   L IA +IA+ + YL    S+  V RD+     ++ E  + 
Sbjct: 103 PDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLV 159

Query: 137 QLFDFTLSLSIPEGETHINDSNRVIG----TFGFMAPEYRTTGDFSEKSDVYSFGALLLE 192
           ++ DF +S  +     +  D  RV G       +M PE      F+ +SDV+S G +L E
Sbjct: 160 KIGDFGMSRDV-----YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 214

Query: 193 LLT-GKKISY 201
           + T GK+  Y
Sbjct: 215 IFTYGKQPWY 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SLSIPEGETHINDSN 158
           A EI SA+ +LH    + ++ RD+K   ++L  E   +L DF +    I  G+T    ++
Sbjct: 102 AAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT----TS 154

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
              GT  ++APE      +    D ++ G LL E+L G
Sbjct: 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 10/102 (9%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG-ETHIND 156
               ++  A+AY H   S  ++ RDIKP  I++ E  V +L DF  + ++     + + D
Sbjct: 104 SYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD 160

Query: 157 SNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTG 196
               + T  + APE    GD  + +  DV++ G ++ ELL G
Sbjct: 161 ---YVATRWYRAPEL-LVGDTNYGKPVDVWAIGCIMAELLDG 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A E+  A+  LH      +V RD+ P  I+L +    QL  F+    + +      D   
Sbjct: 91  AAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEA 143

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKIS 200
           V   +   APE     + +E  D +S GA+L ELLTGK + 
Sbjct: 144 VENMY--CAPEVGGISEETEACDWWSLGAILFELLTGKTLV 182

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 40/204 (19%)

Query: 87  EDTFPFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
            D    S S L  +A +IAS + YL    S   V RD+     ++ +    ++ DF +S 
Sbjct: 122 ADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSR 178

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF 205
           ++  G+ +     R +    +M+ E    G F+  SDV++FG  L E+LT  K    S  
Sbjct: 179 NLYSGD-YYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237

Query: 206 DDGEDYRLQDLVKKYIEN--ESFKEIVDPAIVGEEGLMWPEKEQQLL----ICTELAFK- 258
            D          ++ IEN  E F++               +  Q  L    +C +  +K 
Sbjct: 238 SD----------EQVIENTGEFFRD---------------QGRQVYLPKPALCPDSLYKL 272

Query: 259 ---CLSESEGDRPTIVQVAKQLRQ 279
              C   +  +RP+  ++   L +
Sbjct: 273 MLSCWRRNAKERPSFQEIHATLLE 296

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 20/103 (19%)

Query: 101 IEIAS-------AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH 153
           +EIA+        +AYLH   S  ++ RD+K   I+L E  + +L DF  S SI      
Sbjct: 115 VEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFG-SASI------ 164

Query: 154 INDSNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLEL 193
           +  +N  +GT  +MAPE       G +  K DV+S G   +EL
Sbjct: 165 MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 30/194 (15%)

Query: 91  PFSVSK---LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI 147
           PF++     ++  I+IAS + YL    S+  + RD+     +L E     + DF LS  I
Sbjct: 107 PFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKI 163

Query: 148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
             G+ +       +    ++A E      ++  SDV++FG  + E++T  +  Y+     
Sbjct: 164 YSGDYYRQGCASKL-PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG---- 218

Query: 208 GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR 267
                        +EN    EI +  I G      P+  + +    EL  +C S     R
Sbjct: 219 -------------VEN---SEIYNYLIKGNRLKQPPDCLEDVY---ELMCQCWSPEPKCR 259

Query: 268 PTIVQVAKQLRQIY 281
           P+   +  QL  I+
Sbjct: 260 PSFQHLRDQLELIW 273

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 32/148 (21%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           FP  V++   A ++  A+ YLH   S  +V RD+KP  ++L  +   ++ DF  +  +  
Sbjct: 98  FPEPVARFYAA-QVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153

Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG------------- 196
             T+      + GT  ++APE   +  + +  D ++ G L+ E+L G             
Sbjct: 154 R-TYT-----LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY 207

Query: 197 KKI-----SYSSHFDDGEDYRLQDLVKK 219
           +KI      + S F        +DL++ 
Sbjct: 208 EKILEGKVRFPSFFSP----DAKDLIRN 231

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   + +LH   S+ ++ RD+K   ++L  +   ++ DF +      G+   N ++ 
Sbjct: 102 AAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---NRAST 155

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED 210
             GT  ++APE      ++   D +SFG LL E+L G+    S    D ED
Sbjct: 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ----SPFHGDDED 202

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 11/98 (11%)

Query: 100 AIEIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
             E+  AV  LH +G+    + RD+KP   ++      +L DF LS  I      +  +N
Sbjct: 107 MAEMFEAVDALHELGY----IHRDLKPENFLIDASGHIKLTDFGLSKGI------VTYAN 156

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            V+G+  +MAPE      +    D +S G +L E L G
Sbjct: 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCG 194

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 11/86 (12%)

Query: 118 VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD- 176
           ++ RD+KPT +++      +L DF +S ++      +  +N  IG   +MAPE   +G  
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNL---VASLAKTN--IGCQSYMAPERIKSGGP 178

Query: 177 -----FSEKSDVYSFGALLLELLTGK 197
                ++ +SDV+S G  +LE+  G+
Sbjct: 179 NQNPTYTVQSDVWSLGLSILEMALGR 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A  +   + YLH      +V RD+K   ++L  E   ++ DF L     EG    + ++ 
Sbjct: 107 AACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLC---KEGMGFGDRTST 160

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             GT  F+APE  T   ++   D +  G L+ E+L G
Sbjct: 161 FCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVG 197

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A++IAS + YL    S   V RD+     ++ E    ++ DF +S ++  G+ +   
Sbjct: 141 LHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGD-YYRI 196

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
             R +    +MA E    G F+  SDV++FG  L E+L
Sbjct: 197 QGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 40.4 bits (94), Expect = 6e-04
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 40/177 (22%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SLSIPEGETHINDSN 158
           A EIA  + +LH   S+ ++ RD+K   ++L  E   ++ DF +   ++ +G T    + 
Sbjct: 107 AAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT----TK 159

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT  ++APE      + +  D ++FG LL E+L G+     + F +GED        
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ-----APF-EGED-------- 205

Query: 219 KYIENESFKEIVDPAIVGEEGLMWPE--KEQQLLICTELAFK-------CLSESEGD 266
              E+E F+ I+      E  + +P+   ++ + IC  L  K       C  E E D
Sbjct: 206 ---EDELFQSIM------EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERD 253

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 25/133 (18%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SLSIPEGETHINDSN 158
           A EIA  + +LH   S+ ++ RD+K   ++L  E   ++ DF +   +I  G+T    + 
Sbjct: 107 AAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT----TR 159

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT  ++APE      + +  D ++FG LL E+L G+       F DGED        
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ-----PPF-DGED-------- 205

Query: 219 KYIENESFKEIVD 231
              E+E F+ I++
Sbjct: 206 ---EDELFQSIME 215

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 40.4 bits (94), Expect = 6e-04
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSIPEGETHI 154
           L   ++IA  ++YL       +V RD+    ++++  N  ++ DF L+  L I E E H 
Sbjct: 112 LNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 168

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            D  +V     +MA E      F+ +SDV+S+G  + EL+T
Sbjct: 169 -DGGKV--PIKWMALESILHRRFTHQSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 38/150 (25%)

Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHV-GFSRPVVSRDIKPTTIVLQE 132
             LQ +P             V++   A E+  A+ YLH+ G     V RD+KP  I+L E
Sbjct: 90  RLLQRQPGKC------LSEEVARFYAA-EVLLALEYLHLLGI----VYRDLKPENILLHE 138

Query: 133 ENVAQLFDFTLSLSIPEGETHIND--------------------------SNRVIGTFGF 166
                L DF LS         ++                           SN  +GT  +
Sbjct: 139 SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEY 198

Query: 167 MAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +APE  +        D ++ G LL E+L G
Sbjct: 199 IAPEVISGDGHGSAVDWWTLGILLYEMLYG 228

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 17/117 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-----VAQLFDFTLSLSIPEGE 151
           L I +++A    YL        + RD+     ++ E+      V ++ DF L+  I    
Sbjct: 109 LDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI---- 161

Query: 152 THINDSNRVIGT----FGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
            + +D  R  G       +MAPE    G F+ +SDV+SFG L+ E+LT  +  Y + 
Sbjct: 162 -YKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL 217

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 16/127 (12%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
           +++K     P  ++++  A E   A+ YLH   +  +V RD+KP  +++      +L DF
Sbjct: 90  TLLKNIGALPVDMARMYFA-ETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDF 145

Query: 142 TLS------LSIPEGETHINDSNR------VIGTFGFMAPEYRTTGDFSEKSDVYSFGAL 189
            LS      L+    E HI    R      V GT  ++APE      + +  D ++ G +
Sbjct: 146 GLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGII 205

Query: 190 LLELLTG 196
           L E L G
Sbjct: 206 LYEFLVG 212

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 40.3 bits (94), Expect = 7e-04
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 14/104 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  + ++A  +++L    S+  + RD+    I+L    + ++ DF L+  I       ND
Sbjct: 217 LSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIR------ND 267

Query: 157 SNRVIG-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           SN V+         +MAPE      ++ +SDV+S+G LL E+ +
Sbjct: 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 311

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.0 bits (93), Expect = 8e-04
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 11/100 (11%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           I  ++  A+ YLH   S  ++ RD+K   ++L  +   +L DF +S    +    +   +
Sbjct: 115 ICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVS---AKNVKTLQRRD 168

Query: 159 RVIGTFGFMAPEY---RTTGD--FSEKSDVYSFGALLLEL 193
             IGT  +MAPE     T  D  +  K+D++S G  L+E+
Sbjct: 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 39.8 bits (93), Expect = 9e-04
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 14/99 (14%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV- 160
           +I   + Y+H   S  VV RD+KP+ I++ E    ++ DF L+         I D     
Sbjct: 116 QILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLA--------RIQDPQMTG 164

Query: 161 -IGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGK 197
            + T  + APE   T   +  + D++S G +  E+L GK
Sbjct: 165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 39.6 bits (92), Expect = 9e-04
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 12/106 (11%)

Query: 94  VSKLKIAI---EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           +S+L+IA    E    +AYLH   S+  + RDIK   I+L +    +L DF ++  I   
Sbjct: 103 LSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKI--- 156

Query: 151 ETHINDSNRVIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLEL 193
              I      IGT  +MAPE       G +++  D+++ G   +EL
Sbjct: 157 TATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 13/128 (10%)

Query: 73  KGFL-QDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           K FL ++RP    + E     ++  L   A ++A    YL        + RDI     +L
Sbjct: 97  KSFLRENRP----RPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLL 149

Query: 131 Q---EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFG 187
                  VA++ DF ++  I    ++     R +    +M PE    G F+ K+DV+SFG
Sbjct: 150 TCKGPGRVAKIADFGMARDI-YRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFG 208

Query: 188 ALLLELLT 195
            LL E+ +
Sbjct: 209 VLLWEIFS 216

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 128 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 177

Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 178 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 217

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 16/113 (14%)

Query: 91  PFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL--SLSI 147
               S +K    ++   +A+ H   S  ++ RD+KP  +++  E V +L DF L  S   
Sbjct: 94  GLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGS 150

Query: 148 PEGE-THINDSNRVIGTFGFMAPE--YRTTGDFSEKSDVYSFGALLLELLTGK 197
           P    TH       + T  + APE      G +S   D++S G +  ELL+ +
Sbjct: 151 PVRPYTH------YVVTRWYRAPELLLGDKG-YSTPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 16/151 (10%)

Query: 75  FLQDRPI-SVMKFEDTFPFSVSK---LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           FL  R I S     +  P SVS    L +A++IAS + YL    S   V RD+     ++
Sbjct: 107 FLSQREIESTFTHANNIP-SVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLV 162

Query: 131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALL 190
                 ++ DF +S ++  G+ +     R +    +MA E    G F+  SDV++FG  L
Sbjct: 163 GNHYTIKIADFGMSRNLYSGD-YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL 221

Query: 191 LELLT-GKKISYSSHFDD------GEDYRLQ 214
            E+ T  K+  YS   D+      GE +R Q
Sbjct: 222 WEMFTLCKEQPYSLLSDEQVIENTGEFFRNQ 252

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 36/192 (18%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IAS + YL    S   V RD+     ++ +    ++ DF +S ++     + +D
Sbjct: 133 LYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL-----YSSD 184

Query: 157 SNRVIGT----FGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDY 211
             RV G       +MA E    G F+ KSDV++FG  L E+LT  ++  Y  H  D    
Sbjct: 185 YYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY-EHLTD--QQ 241

Query: 212 RLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIV 271
            +++    + ++     +  P    ++               EL  +C    E DRPT  
Sbjct: 242 VIENAGHFFRDDGRQIYLPRPPNCPKD-------------IYELMLECWRRDEEDRPT-- 286

Query: 272 QVAKQLRQIYQS 283
                 R+I+  
Sbjct: 287 -----FREIHLF 293

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 10/109 (9%)

Query: 89  TFPFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI 147
           T P S S++  ++ E    + YLH   S+  + RDIK   I+L +    +L DF +S  I
Sbjct: 100 TGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQI 156

Query: 148 PEGETHINDSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLEL 193
                 I      IGT  +MAPE       G +++  D+++ G   +EL
Sbjct: 157 ---TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 46/149 (30%)

Query: 90  FPFSVSKLKIAIEIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL----- 143
           F   +++  IA E+  A+  +H +GF    + RDIKP  I++  +   +L DF L     
Sbjct: 98  FEEDLARFYIA-ELTCAIESVHKMGF----IHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152

Query: 144 ----SLSIPEGETHINDS-------------------------------NRVIGTFGFMA 168
               S    +G+ H  DS                               + ++GT  ++A
Sbjct: 153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIA 212

Query: 169 PEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           PE      +++  D +S G +L E+L G+
Sbjct: 213 PEVLLRTGYTQLCDWWSVGVILYEMLVGQ 241

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 25/133 (18%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL-SLSIPEGETHINDSN 158
           A EI+  + +LH    R ++ RD+K   ++L  E   ++ DF +    + +G T    + 
Sbjct: 107 AAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT----TR 159

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT  ++APE      + +  D +++G LL E+L G+         DGED        
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF------DGED-------- 205

Query: 219 KYIENESFKEIVD 231
              E+E F+ I++
Sbjct: 206 ---EDELFQSIME 215

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 42/196 (21%)

Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 75  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLCQVIQMELDHERMSYLLY 133

Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +   G + +     V 
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV- 187

Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED----------- 210
            T  + APE      + E  D++S G ++ E++ G  +   +   D  +           
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246

Query: 211 ---YRLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 EFMKKLQPTVRTYVEN 262

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN- 155
           L   ++IA  + YL     R +V RD+    ++++  N  ++ DF L+  +   E   N 
Sbjct: 112 LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 168

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           D  ++     +MA E      F+ +SDV+S+G  + EL+T
Sbjct: 169 DGGKM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 14/107 (13%)

Query: 106 AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV--IGT 163
           A+AYLH    R ++ RD+K   I L E   A L DF  +  +     H +        GT
Sbjct: 197 ALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA---HPDTPQCYGWSGT 250

Query: 164 FGFMAPEYRTTGDFSEKSDVYSFGALLLEL------LTGKKISYSSH 204
               +PE      +  K+D++S G +L E+      L GK++  SS 
Sbjct: 251 LETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSS 297

Length = 392

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A E+  A+ +LH      V+ RD+K   I+L  E   +L DF +     EG  +   +  
Sbjct: 102 AAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMC---KEGILNGVTTTT 155

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             GT  ++APE     ++    D ++ G L+ E++ G+
Sbjct: 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 11/113 (9%)

Query: 83  VMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFT 142
            + + D   FS        ++A+ + +L    S+  V RD+    +++ E  + ++ DF 
Sbjct: 235 ALSYMDLVGFS-------YQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFG 284

Query: 143 LSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           L+  I     +I+  +  +    +MAPE      ++  SDV+SFG LL E+ T
Sbjct: 285 LARDIMRDSNYISKGSTFL-PLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 14/120 (11%)

Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL 143
           ++ED F   +++  +A E+  A+  +H +G+    V RDIKP  +++      +L DF  
Sbjct: 94  RYEDQFDEDMAQFYLA-ELVLAIHSVHQMGY----VHRDIKPENVLIDRTGHIKLADFGS 148

Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKS------DVYSFGALLLELLTGK 197
           +  +      +N S   +GT  ++APE  TT +   K       D +S G +  E++ G+
Sbjct: 149 AARL-TANKMVN-SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 14/116 (12%)

Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL--FDFT 142
           K+ +    S  + K   +I   + + H   S  ++ RDIKP  I++ +  V +L  F F 
Sbjct: 92  KYPNGLDESRVR-KYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFA 147

Query: 143 LSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTG 196
            +L+ P GE + +     + T  + APE    GD  +    D+++ G L+ E+LTG
Sbjct: 148 RTLAAP-GEVYTD----YVATRWYRAPEL-LVGDTKYGRAVDIWAVGCLVTEMLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 37/189 (19%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-LSIPEGETHIN 155
           L   ++IA  + YL       +V R++    I+L+ +++ Q+ DF ++ L  P+ + +  
Sbjct: 112 LNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYF- 167

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
             +       +MA E    G ++ +SDV+S+G  + E+++     Y+         R  +
Sbjct: 168 -YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG-------MRPHE 219

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT----ELAFKCLSESEGDRPTIV 271
           +               P ++ E+G    E+  Q  ICT     +  KC    E  RPT  
Sbjct: 220 V---------------PDLL-EKG----ERLAQPQICTIDVYMVMVKCWMIDENVRPTFK 259

Query: 272 QVAKQLRQI 280
           ++A +  ++
Sbjct: 260 ELANEFTRM 268

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 14/120 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L    ++A  + +L    S+  V RD+    ++L +  + ++ DF L+  I      ++D
Sbjct: 240 LSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDI------MHD 290

Query: 157 SNRVI--GTF---GFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
           SN V    TF    +MAPE      ++  SDV+S+G LL E+ +     Y     D   Y
Sbjct: 291 SNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 12/119 (10%)

Query: 93  SVSKLKIAI-EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL--SIPE 149
           S+  +KI + +I   +AY H    R V+ RD+KP  +++ E    +L DF L+   S+P 
Sbjct: 102 SMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158

Query: 150 GETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            +T+   SN V+ T  +  P+    + ++S + D++  G +  E+ +G+ +   S  +D
Sbjct: 159 -KTY---SNEVV-TLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 17/104 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L+ A ++A+ + YL     +  + RD+    +++ E   +++ DF LS     GE     
Sbjct: 122 LQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLS----RGE----- 169

Query: 157 SNRVIGTFG-----FMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
              V  T G     +MA E      ++ KSDV+SFG LL E+++
Sbjct: 170 EVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 8/109 (7%)

Query: 91  PFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           PF  S++K + +++ S VA+LH      ++ RD+K + ++L    + ++ DF L+     
Sbjct: 102 PFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158

Query: 150 GETHINDSNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGK 197
                    +++ T  + APE      ++S   D++S G +  ELLT K
Sbjct: 159 PLKPYT---QLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	284
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.98
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.98
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.98
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.98
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.98
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.98
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.98
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.98
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.98
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.98
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.98
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.98
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.98
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.98
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.98
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.98
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.98
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.98
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.98
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.98
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.98
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.98
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.98
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.97
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.97
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.97
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.97
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.97
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.97
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.97
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.97
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG0584	632	consensus Serine/threonine protein kinase [General	99.97
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.96
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
KOG0586	596	consensus Serine/threonine protein kinase [General	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.96
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.96
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.96
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.95
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.93
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.92
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.91
KOG1152	772	consensus Signal transduction serine/threonine kin	99.91
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.91
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.9
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.88
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.85
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.84
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.84
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.83
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.82
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.82
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.81
PRK09188	365	serine/threonine protein kinase; Provisional	99.8
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.78
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.77
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.76
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.74
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.73
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.69
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.68
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.67
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.65
PRK12274	218	serine/threonine protein kinase; Provisional	99.61
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.54
smart00090	237	RIO RIO-like kinase.	99.52
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.5
PRK14879	211	serine/threonine protein kinase; Provisional	99.48
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.45
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.41
COG4248	637	Uncharacterized protein with protein kinase and he	99.28
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.25
PRK10345	210	hypothetical protein; Provisional	99.25
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.25
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.25
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.2
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.13
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.1
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.08
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.05
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.02
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.96
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.91
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.89
KOG3087	229	consensus Serine/threonine protein kinase [General	98.66
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.58
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.43
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.36
KOG1243	690	consensus Protein kinase [General function predict	98.31
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.22
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.2
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.94
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.92
PRK09902	216	hypothetical protein; Provisional	97.92
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.88
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.52
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.47
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	96.99
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.95
PHA03111	444	Ser/Thr kinase; Provisional	96.85
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	96.76
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.73
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.67
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.61
PRK05231	319	homoserine kinase; Provisional	96.32
KOG2270	520	consensus Serine/threonine protein kinase involved	96.19
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.18
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.15
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.0
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.44
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	94.93
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.89
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	94.69
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	94.64
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.49
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.38
PF01636	239	APH: Phosphotransferase enzyme family This family	94.3
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	94.3
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.8
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	93.68
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.57
PRK10271	188	thiK thiamine kinase; Provisional	93.51
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	93.36
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	93.36
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.04
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.81
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	92.23
KOG1236	565	consensus Predicted unusual protein kinase [Genera	92.12
PRK12396	409	5-methylribose kinase; Reviewed	91.93
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	91.68
PLN02236	344	choline kinase	91.67
COG2334	331	Putative homoserine kinase type II (protein kinase	91.3
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	91.09
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	90.29
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	90.17
PRK06148	1013	hypothetical protein; Provisional	88.14
KOG1093	725	consensus Predicted protein kinase (contains TBC a	87.85
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	87.84
PLN02756	418	S-methyl-5-thioribose kinase	87.03
PRK11768	325	serine/threonine protein kinase; Provisional	87.01

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-47  Score=331.75  Aligned_cols=231  Identities=41%  Similarity=0.678  Sum_probs=197.0

Q ss_pred             CcceecHHHHHHHhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------CC
Q 039895           41 PIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------FP   91 (284)
Q Consensus        41 ~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------~~   91 (284)
                      ..+.|++.||.+||++|+..++||+|+||.||+|.. +|..||||++...                            ||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            788999999999999999999999999999999999 6689999987652                            33


Q ss_pred             Cc-------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeec
Q 039895           92 FS-------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        92 ~~-------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                      .+                               ..|++||.++|+||+|||+.+..+||||||||+|||+|+++.+||+|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            32                               45889999999999999998888999999999999999999999999


Q ss_pred             cccccccCC-CCccccCCCCc-ccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          141 FTLSLSIPE-GETHINDSNRV-IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       141 fg~a~~~~~-~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      ||+|+.... ......    . .||.+|+|||+...+..+.++|||||||+++|++||+.+.+...  ......+..|..
T Consensus       221 FGLa~~~~~~~~~~~~----~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~--~~~~~~l~~w~~  294 (361)
T KOG1187|consen  221 FGLAKLGPEGDTSVST----TVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR--PRGELSLVEWAK  294 (361)
T ss_pred             ccCcccCCccccceee----ecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC--CcccccHHHHHH
Confidence            999966654 221111    2 79999999999999999999999999999999999998876543  334445899998


Q ss_pred             HHhhcCcccccccccccC-CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          219 KYIENESFKEIVDPAIVG-EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .....+.+.+++|+.+.. ..    + ...+...+..++.+|++.+|..||+|.||+++|+.+..
T Consensus       295 ~~~~~~~~~eiiD~~l~~~~~----~-~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  295 PLLEEGKLREIVDPRLKEGEY----P-DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHCcchhheeCCCccCCCC----C-hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            888888999999999873 31    1 11567779999999999999999999999999977653

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-42  Score=295.12  Aligned_cols=195  Identities=28%  Similarity=0.391  Sum_probs=154.6

Q ss_pred             CCCeeeecCCceEEEEEeCCcc-eEEEeecCCC------------------------------CCc--------------
Q 039895           59 GGKVIMKCLFYKLYKGFLQDRP-ISVMKFEDTF------------------------------PFS--------------   93 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~~~~~-vavK~~~~~~------------------------------~~~--------------   93 (284)
                      ..+.||+|+||+||+|.+.|.. ||||++....                              |.+              
T Consensus        45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~  124 (362)
T KOG0192|consen   45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG  124 (362)
T ss_pred             hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence            3456999999999999999988 9999998631                              000              


Q ss_pred             -----------------hhHHHHHHHHHHHHHHhccCCCCC-eeecccccCcEEEecCC-cceeeccccccccCCCCccc
Q 039895           94 -----------------VSKLKIAIEIASAVAYLHVGFSRP-VVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        94 -----------------~~~~~i~~~i~~gL~~LH~~~~~~-ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                       ..++++|.|||+||.|||   +.+ ||||||||+|||++.++ ++||+|||+++......   
T Consensus       125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---  198 (362)
T KOG0192|consen  125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---  198 (362)
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc---
Confidence                             456899999999999999   888 99999999999999998 99999999998776432   


Q ss_pred             cCCCCcccCcccccccccc--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRT--TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ...+...||+.|||||++.  ...|+.|+||||||+++|||+||..||....        ..............+     
T Consensus       199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~--------~~~~~~~v~~~~~Rp-----  265 (362)
T KOG0192|consen  199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA--------PVQVASAVVVGGLRP-----  265 (362)
T ss_pred             ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhcCCCC-----
Confidence            1112267999999999999  5689999999999999999999999997543        111122221111111     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                +.+..++..+..||.+||+.||+.||++.+++..|+.+..
T Consensus       266 ----------~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  266 ----------PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             ----------CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence                      1122355668899999999999999999999999998864

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-42  Score=275.36  Aligned_cols=197  Identities=25%  Similarity=0.337  Sum_probs=156.5

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|...++||.|+||+||++..  +|..||.|.++-.                                            
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            455567899999999999998  9999999998744                                            


Q ss_pred             -CCCc-------------------hhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEecCCcceeecccccccc
Q 039895           90 -FPFS-------------------VSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 -~~~~-------------------~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                       +|..                   ....+++.|++.||..+|... ..  |+||||||.||+|+.+|.+||+|||+++.+
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence             2211                   567789999999999999321 44  999999999999999999999999999998


Q ss_pred             CCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      .+..+...   +.+|||.||+||.+...+|+.+|||||+||++|||..-++||++..        +..+ ...+.++.++
T Consensus       179 ~s~~tfA~---S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~L-~~KI~qgd~~  246 (375)
T KOG0591|consen  179 SSKTTFAH---SLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--------LLSL-CKKIEQGDYP  246 (375)
T ss_pred             cchhHHHH---hhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--------HHHH-HHHHHcCCCC
Confidence            77655433   3799999999999999999999999999999999999999998643        2222 2333444433


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .+.              ....+..+..|+..|+..||+.||+...++..++.
T Consensus       247 ~~p--------------~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  247 PLP--------------DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             CCc--------------HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            322              13445558899999999999999986555555443

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-41  Score=281.34  Aligned_cols=195  Identities=22%  Similarity=0.295  Sum_probs=152.9

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------C----------------------CCc--
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------F----------------------PFS--   93 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------~----------------------~~~--   93 (284)
                      +...+.||+|..|+||++.+  ++..+|+|.+...                 -                      |.+  
T Consensus        81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM  160 (364)
T KOG0581|consen   81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM  160 (364)
T ss_pred             hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence            33457899999999999999  7999999999433                 0                      111  


Q ss_pred             -----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           94 -----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        94 -----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                       ...-+++.++++||.|||+  ..+||||||||+|||+++.|.+||||||.+..+..+.     
T Consensus       161 DgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~-----  233 (364)
T KOG0581|consen  161 DGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSI-----  233 (364)
T ss_pred             CCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhh-----
Confidence                             3345799999999999994  4999999999999999999999999999998876551     


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ..+++||..|||||.+.+..|+.++||||||+.++|+.+|+.|+....   .......+.......... +.        
T Consensus       234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~---~~~~~~~~Ll~~Iv~~pp-P~--------  301 (364)
T KOG0581|consen  234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN---PPYLDIFELLCAIVDEPP-PR--------  301 (364)
T ss_pred             cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC---CCCCCHHHHHHHHhcCCC-CC--------
Confidence            223899999999999999999999999999999999999999987641   222333333333332111 11        


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                           .|.. .+++++.+++..||+.||.+|||+.|++++
T Consensus       302 -----lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  302 -----LPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             -----CCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                 1111 356669999999999999999999999853

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-41  Score=295.08  Aligned_cols=190  Identities=21%  Similarity=0.300  Sum_probs=155.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ..|..+++||+|||+.||+++.  .|..||+|++.+.                                           
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4588899999999999999999  8999999999764                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       .|..               .....++.||+.||.|||   +.+|+|||||..|++++++.++||+|||+|..+......
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er  174 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER  174 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence             2222               567789999999999999   999999999999999999999999999999988754322


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .   .+.+|||-|.|||++....++..+||||+||++|-|+.|++||....        +.+........    +     
T Consensus       175 k---~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--------vkety~~Ik~~----~-----  234 (592)
T KOG0575|consen  175 K---KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--------VKETYNKIKLN----E-----  234 (592)
T ss_pred             c---ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--------HHHHHHHHHhc----C-----
Confidence            2   23799999999999999999999999999999999999999997543        22222221111    1     


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              +..+.....+..+||.++|+.+|.+|||+++|+.
T Consensus       235 --------Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  235 --------YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             --------cccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                    1112233445789999999999999999999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=3.3e-41  Score=271.26  Aligned_cols=210  Identities=20%  Similarity=0.284  Sum_probs=153.8

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      .|+...++|+|+||.||+++.  +|+.||||+|...                                           |
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            456667899999999999999  8999999999765                                           3


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC-CCCccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP-EGETHI  154 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~-~~~~~~  154 (284)
                      |..               ....+++.|++.|+.|+|   ++++|||||||+||||+.+|.+||||||+|+.+. .+..+.
T Consensus        83 ~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT  159 (396)
T KOG0593|consen   83 CDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT  159 (396)
T ss_pred             cchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence            332               456689999999999999   9999999999999999999999999999999987 333332


Q ss_pred             cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHH---------HhhcC
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK---------YIENE  224 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~  224 (284)
                      .    .+.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+.|.+..  +-+....+.....         +..++
T Consensus       160 D----YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S--DiDQLy~I~ktLG~L~prhq~iF~~N~  233 (396)
T KOG0593|consen  160 D----YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS--DIDQLYLIRKTLGNLIPRHQSIFSSNP  233 (396)
T ss_pred             h----hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc--hHHHHHHHHHHHcccCHHHHHHhccCC
Confidence            2    678999999999887 589999999999999999999999887644  2111111111110         00111


Q ss_pred             cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      -+.-+.-|....-... ....+.....+++++..||+.||++|++.+|++.
T Consensus       234 ~F~Gv~lP~~~~~epL-e~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPL-ERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ceeeeecCCCCCccch-hhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            1221111111111000 0001223335789999999999999999999874

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=2e-41  Score=294.35  Aligned_cols=215  Identities=24%  Similarity=0.324  Sum_probs=160.3

Q ss_pred             eecHHHHHHHhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------
Q 039895           44 SFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------   89 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------   89 (284)
                      ..+.+++....+.+.....||+|+||+||+|.|.|. ||||++...                                  
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            334455555556666778999999999999999875 999999866                                  


Q ss_pred             --------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           90 --------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        90 --------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                              +|..                .+.+.||.|||+|+.|||   .++|||||||+.||++.+++++||+|||++.
T Consensus       460 p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLat  536 (678)
T KOG0193|consen  460 PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLAT  536 (678)
T ss_pred             CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEeccccee
Confidence                    2222                456789999999999999   9999999999999999999999999999985


Q ss_pred             ccCCCCccccCCCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          146 SIPEGETHINDSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      .-..- ..........|...|||||++..   .+|+..+|||||||++|||+||..|+....   .      +.+--.+.
T Consensus       537 vk~~w-~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~---~------dqIifmVG  606 (678)
T KOG0193|consen  537 VKTRW-SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN---R------DQIIFMVG  606 (678)
T ss_pred             eeeee-ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC---h------hheEEEec
Confidence            43211 11111122568889999999864   379999999999999999999999986322   0      00000001


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .+-    +.+.+       ......++.++.+|+..||..++++||++.+|+..|+.+..+
T Consensus       607 rG~----l~pd~-------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  607 RGY----LMPDL-------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             ccc----cCccc-------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            110    00111       112456677799999999999999999999999999988763

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-40  Score=286.28  Aligned_cols=195  Identities=27%  Similarity=0.366  Sum_probs=157.9

Q ss_pred             CCeeeecCCceEEEEEeCCc-ceEEEeecCC---------------------------CCCc------------------
Q 039895           60 GKVIMKCLFYKLYKGFLQDR-PISVMKFEDT---------------------------FPFS------------------   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~~~~-~vavK~~~~~---------------------------~~~~------------------   93 (284)
                      .+.||+|-||+||.|.+++. .||+|.++..                           .|..                  
T Consensus       211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~  290 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLD  290 (468)
T ss_pred             HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHH
Confidence            46799999999999999776 9999999875                           1111                  


Q ss_pred             ------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcc
Q 039895           94 ------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        94 ------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                  .+.+.++.|||+|++||.   ++++|||||-++|||++++..+||+|||+|+...++.+.....  ..
T Consensus       291 yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~--~k  365 (468)
T KOG0197|consen  291 YLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG--GK  365 (468)
T ss_pred             HhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCC--CC
Confidence                        567889999999999999   9999999999999999999999999999999665554433322  33


Q ss_pred             cCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCC
Q 039895          162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL  240 (284)
Q Consensus       162 gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
                      -+..|.|||.+..+.++.+||||||||+|||++| |+.|+....        ..+.+...-                .+.
T Consensus       366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--------n~ev~~~le----------------~Gy  421 (468)
T KOG0197|consen  366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--------NEEVLELLE----------------RGY  421 (468)
T ss_pred             CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--------HHHHHHHHh----------------ccC
Confidence            4678999999999999999999999999999999 555544322        222222211                233


Q ss_pred             CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      +.|.+..|++.+.+||..||+.+|++|||+..+...|+++..+
T Consensus       422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            4455667888899999999999999999999999999998765

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-40  Score=282.07  Aligned_cols=198  Identities=21%  Similarity=0.346  Sum_probs=155.4

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCCc-----------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPFS-----------------------------------   93 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-----------------------------------   93 (284)
                      +...++|..++.||+|+|++|++|+.  .++.+|||++.+.+...                                   
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            44457899999999999999999999  89999999997761100                                   


Q ss_pred             -------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           94 -------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        94 -------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                                               .....++.+|+.||+|||   +.|||||||||+|||+|.+|.++|+|||.|+.+.
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence                                     334568999999999999   9999999999999999999999999999999886


Q ss_pred             CCCcc----------ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          149 EGETH----------INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       149 ~~~~~----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      .....          .....+++||..|.+||++.....+..+|+|+|||++|+|+.|.+||....     ...+-+-+.
T Consensus       226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-----eyliFqkI~  300 (604)
T KOG0592|consen  226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-----EYLIFQKIQ  300 (604)
T ss_pred             hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-----HHHHHHHHH
Confidence            43222          111245899999999999999999999999999999999999999997543     111111111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ..  .-.+                  ++..++.+.+|+.+.|..||.+|+|+.+|.++
T Consensus       301 ~l--~y~f------------------p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  301 AL--DYEF------------------PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             Hh--cccC------------------CCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            10  0011                  11122347899999999999999999888653

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-39  Score=270.67  Aligned_cols=145  Identities=24%  Similarity=0.406  Sum_probs=126.9

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ...+|...+.||+|+||+||+|++  ++..||||.+...                                         
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            346788888899999999999999  8899999998655                                         


Q ss_pred             --CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC------Ccceeeccccccc
Q 039895           90 --FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE------NVAQLFDFTLSLS  146 (284)
Q Consensus        90 --~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~------~~~kl~Dfg~a~~  146 (284)
                        ||..               .....++.|||.||++||   +++||||||||+||||+..      -.+||+|||+|+.
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~  164 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF  164 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence              5553               456679999999999999   9999999999999999865      4579999999999


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                      +..+....    +.+|++.|||||++....|+.|+|+||+|+++|++++|+.||....
T Consensus       165 L~~~~~a~----tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  165 LQPGSMAE----TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             CCchhHHH----HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            98654332    2789999999999999999999999999999999999999997543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-39  Score=268.16  Aligned_cols=185  Identities=26%  Similarity=0.324  Sum_probs=147.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCCc--------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPFS--------------------------------------   93 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~--------------------------------------   93 (284)
                      .++|+..++||+|+||.||.++.  +++.+|+|++++..+.+                                      
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            47899999999999999999998  89999999998772222                                      


Q ss_pred             ---------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           94 ---------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        94 ---------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                                           ....-++.+|+.||.|||   +++||||||||+|||+|.+|.++|+|||+++..-....
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence                                 334558999999999999   99999999999999999999999999999986543322


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .   +.+++||+.|||||++....|+..+|.||+|+++|||++|.+||+...        ...+........ ...  . 
T Consensus       181 ~---t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~--------~~~~~~~I~~~k-~~~--~-  245 (357)
T KOG0598|consen  181 A---TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED--------VKKMYDKILKGK-LPL--P-  245 (357)
T ss_pred             c---cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc--------HHHHHHHHhcCc-CCC--C-
Confidence            2   123799999999999999999999999999999999999999998644        233333322221 000  0 


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP  268 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  268 (284)
                                  +........+++...|..||++|.
T Consensus       246 ------------p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  246 ------------PGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             ------------CccCCHHHHHHHHHHhccCHHHhc
Confidence                        111223378999999999999996

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.9e-39  Score=256.71  Aligned_cols=211  Identities=16%  Similarity=0.164  Sum_probs=153.0

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCC-----------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPF-----------------------------------------   92 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~-----------------------------------------   92 (284)
                      .|...++||+|.||.||+|.+  +|+.||||+++...-.                                         
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            355678999999999999999  8999999999765110                                         


Q ss_pred             -----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           93 -----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        93 -----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                       ......++.++++||+|||   .+.|+||||||.|+|++++|.+||+|||+|+.+.+......
T Consensus        83 m~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~  159 (318)
T KOG0659|consen   83 MPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT  159 (318)
T ss_pred             ccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence                             1557789999999999999   99999999999999999999999999999999876543322


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh--cCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE--NESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  232 (284)
                      .   .+-|.+|+|||.+.+. .|+..+||||.||++.||+.|.+.|.+..    +-.++....+....  ...++++..-
T Consensus       160 ~---~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s----DidQL~~If~~LGTP~~~~WP~~~~l  232 (318)
T KOG0659|consen  160 H---QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS----DIDQLSKIFRALGTPTPDQWPEMTSL  232 (318)
T ss_pred             c---ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc----hHHHHHHHHHHcCCCCcccCcccccc
Confidence            2   3679999999988765 69999999999999999999987765433    11122222222111  1223322110


Q ss_pred             c----ccCCCCC-CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 A----IVGEEGL-MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~----~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .    +...+.. .-.....+....++|+..+|.+||.+|+|++|++++
T Consensus       233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            0    0000000 000122344456899999999999999999999764

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.3e-40  Score=273.94  Aligned_cols=193  Identities=21%  Similarity=0.252  Sum_probs=149.6

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---CCC--------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---FPF--------------------------------------   92 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~--------------------------------------   92 (284)
                      .|-..+.||+|+||.|-+|..  +|+.||||++.+.   -|.                                      
T Consensus       173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y  252 (475)
T KOG0615|consen  173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY  252 (475)
T ss_pred             eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence            455678899999999999998  9999999999866   111                                      


Q ss_pred             ----------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC---Ccceeecccccccc
Q 039895           93 ----------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE---NVAQLFDFTLSLSI  147 (284)
Q Consensus        93 ----------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~Dfg~a~~~  147 (284)
                                            +..-..++.|++.|+.|||   +.||+||||||+|||+..+   ..+||+|||+|+..
T Consensus       253 mVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~  329 (475)
T KOG0615|consen  253 MVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS  329 (475)
T ss_pred             EEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence                                  0233458999999999999   9999999999999999866   78999999999988


Q ss_pred             CCCCccccCCCCcccCccccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE  224 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
                      .....  .  .+.+|||.|.|||++.+..   +..++|+||+||+||-+++|.+||....    ....+.+.+..     
T Consensus       330 g~~sf--m--~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~----~~~sl~eQI~~-----  396 (475)
T KOG0615|consen  330 GEGSF--M--KTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY----TDPSLKEQILK-----  396 (475)
T ss_pred             cccee--h--hhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc----CCccHHHHHhc-----
Confidence            64322  2  2379999999999998764   3358899999999999999999997543    11223332221     


Q ss_pred             cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 +.+...++.......+.++|+.+||..||++|||+.|+++
T Consensus       397 -----------G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  397 -----------GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             -----------CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence                       1111122334455666889999999999999999999985

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-40  Score=277.45  Aligned_cols=210  Identities=17%  Similarity=0.226  Sum_probs=155.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPF----------------------------------------   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~----------------------------------------   92 (284)
                      +.|...+.||.|.||.||+|+.  .|..||||.++..+-.                                        
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            4555667899999999999998  8899999999877111                                        


Q ss_pred             -------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           93 -------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        93 -------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                         +.....|+.||++||+|+|   .+|+.|||+||+|||+..+..+||+|||+|+.+.+....
T Consensus        90 E~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY  166 (538)
T KOG0661|consen   90 EFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY  166 (538)
T ss_pred             HhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccCCCc
Confidence                               1567789999999999999   999999999999999999999999999999998766544


Q ss_pred             ccCCCCcccCcccccccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc---ccc-
Q 039895          154 INDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES---FKE-  228 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-  228 (284)
                      ..    .+.|.+|+|||++. .+.|+.+.||||+|||++|+.+-++.|.+..    +...+.... ..+....   +.+ 
T Consensus       167 Te----YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s----E~Dqi~KIc-~VLGtP~~~~~~eg  237 (538)
T KOG0661|consen  167 TE----YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS----EIDQIYKIC-EVLGTPDKDSWPEG  237 (538)
T ss_pred             ch----hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc----HHHHHHHHH-HHhCCCccccchhH
Confidence            33    68899999999865 5679999999999999999999999887643    111111111 1111111   111 


Q ss_pred             -----cccccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          229 -----IVDPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       229 -----~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                           .+.-.+....+... .....+..++.+++.+|+++||++||||.|++++
T Consensus       238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence                 11111111111000 0112356678899999999999999999999864

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-39  Score=276.83  Aligned_cols=211  Identities=20%  Similarity=0.215  Sum_probs=154.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|+...+||+|.||.||+|..  +|+.||+|++...                                           
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            4577778999999999999999  8999999998755                                           


Q ss_pred             -----------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -----------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -----------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                                       ...+.+...++.|++.||.|+|   +++|+|||||.+|||||.+|.+||+|||+|+.+.....
T Consensus       197 FeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~  273 (560)
T KOG0600|consen  197 FEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS  273 (560)
T ss_pred             EecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence                             1111678889999999999999   99999999999999999999999999999998765543


Q ss_pred             cccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc---Cccc-
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN---ESFK-  227 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-  227 (284)
                      ...+.  .+-|++|+|||++.+. .|+.++|+||.|||+.||++|+++|.+..    +...+. .+-.....   ..|. 
T Consensus       274 ~~~T~--rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t----EveQl~-kIfklcGSP~e~~W~~  346 (560)
T KOG0600|consen  274 APYTS--RVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT----EVEQLH-KIFKLCGSPTEDYWPV  346 (560)
T ss_pred             ccccc--ceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc----HHHHHH-HHHHHhCCCChhcccc
Confidence            33222  5679999999998876 69999999999999999999999887543    111111 11111111   1111 


Q ss_pred             -cccccc-ccCCCCC--CCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          228 -EIVDPA-IVGEEGL--MWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       228 -~~~~~~-~~~~~~~--~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       .+.... +......  ... .....+...++|+..+|..||.+|.|+.++++
T Consensus       347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence             000000 0000000  000 01223445789999999999999999999874

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-38  Score=265.25  Aligned_cols=191  Identities=21%  Similarity=0.285  Sum_probs=151.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~   91 (284)
                      .|....+||+|+||.||+|.+  .++.||+|++.-.                                          +|
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            466668999999999999999  8899999999755                                          11


Q ss_pred             Cc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 FS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      ..               ....-++.+++.||.|||   ..+.+|||||+.|||+..+|.+|++|||.+..+.......  
T Consensus        94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr--  168 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR--  168 (467)
T ss_pred             cCcchhhhhccCCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhcc--
Confidence            11               223347899999999999   9999999999999999999999999999998887655443  


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                       .+++||+.|||||++....|+.++||||||++.+||.+|.+|+.....  ....            --+++-..|.+  
T Consensus       169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP--mrvl------------flIpk~~PP~L--  231 (467)
T KOG0201|consen  169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP--MRVL------------FLIPKSAPPRL--  231 (467)
T ss_pred             -ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc--ceEE------------EeccCCCCCcc--
Confidence             338999999999999988999999999999999999999999865431  0000            00111111222  


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                              .....+.+.+++..||+.||+.||||.++++.
T Consensus       232 --------~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  232 --------DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             --------ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence                    12444558899999999999999999999863

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=8.2e-38  Score=271.07  Aligned_cols=161  Identities=23%  Similarity=0.394  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD  176 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (284)
                      +.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......... .....+++.|+|||++.+..
T Consensus       177 ~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~  252 (338)
T cd05102         177 ICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR-KGSARLPLKWMAPESIFDKV  252 (338)
T ss_pred             HHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhc-ccCCCCCccccCcHHhhcCC
Confidence            457889999999999   99999999999999999999999999999987643322211 11234678899999998889


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHH
Q 039895          177 FSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTEL  255 (284)
Q Consensus       177 ~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (284)
                      ++.++|||||||++|||++ |..||.....    ..   ... .....+....               .+...+..+.+|
T Consensus       253 ~~~~sDiwslG~il~el~~~g~~pf~~~~~----~~---~~~-~~~~~~~~~~---------------~~~~~~~~l~~l  309 (338)
T cd05102         253 YTTQSDVWSFGVLLWEIFSLGASPYPGVQI----NE---EFC-QRLKDGTRMR---------------APENATPEIYRI  309 (338)
T ss_pred             CCcccCHHHHHHHHHHHHhCCCCCCCCCCc----cH---HHH-HHHhcCCCCC---------------CCCCCCHHHHHH
Confidence            9999999999999999997 8888864321    00   111 1111111100               011223457899


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          256 AFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       256 ~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                      +.+||+.||++|||+.|+++.|+++.++|
T Consensus       310 i~~cl~~dp~~RPs~~el~~~l~~~~~~~  338 (338)
T cd05102         310 MLACWQGDPKERPTFSALVEILGDLLQEN  338 (338)
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.1e-38  Score=274.12  Aligned_cols=198  Identities=21%  Similarity=0.232  Sum_probs=150.2

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      ...++|+....||+|+||.||.++-  +|..+|+|++++.                                        
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            3568999999999999999999998  8999999999876                                        


Q ss_pred             -------------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 -------------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -------------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                                         ...+.....++.+++.|+.-||   ..|+|||||||+|+|||..|.+||+|||++..+...
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~  294 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK  294 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence                               1111556678999999999999   999999999999999999999999999998644210


Q ss_pred             ---------------------Cccc----cCC-------------------CCcccCccccccccccCCCCCcchhHHHH
Q 039895          151 ---------------------ETHI----NDS-------------------NRVIGTFGFMAPEYRTTGDFSEKSDVYSF  186 (284)
Q Consensus       151 ---------------------~~~~----~~~-------------------~~~~gt~~y~aPE~~~~~~~~~~~DvwS~  186 (284)
                                           ....    ...                   -..+|||.|||||++.+..|+..+|.||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL  374 (550)
T KOG0605|consen  295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL  374 (550)
T ss_pred             hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence                                 0000    000                   03689999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC
Q 039895          187 GALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD  266 (284)
Q Consensus       187 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  266 (284)
                      |||+|||+.|.+||.+...     .....-+..+..                ...+|.......+..+||.+|+. ||++
T Consensus       375 G~ImyEmLvGyPPF~s~tp-----~~T~rkI~nwr~----------------~l~fP~~~~~s~eA~DLI~rll~-d~~~  432 (550)
T KOG0605|consen  375 GCIMYEMLVGYPPFCSETP-----QETYRKIVNWRE----------------TLKFPEEVDLSDEAKDLITRLLC-DPEN  432 (550)
T ss_pred             HHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhh----------------hccCCCcCcccHHHHHHHHHHhc-CHHH
Confidence            9999999999999986541     111111111100                01122233334568899999999 9999


Q ss_pred             CCC---HHHHH
Q 039895          267 RPT---IVQVA  274 (284)
Q Consensus       267 Rps---~~ev~  274 (284)
                      |..   +.||.
T Consensus       433 RLG~~G~~EIK  443 (550)
T KOG0605|consen  433 RLGSKGAEEIK  443 (550)
T ss_pred             hcCcccHHHHh
Confidence            975   55553

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-37  Score=261.60  Aligned_cols=205  Identities=21%  Similarity=0.264  Sum_probs=156.4

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCCc-------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPFS-------------------------------------   93 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-------------------------------------   93 (284)
                      .-.+|+....||.|..++||+|..  .+..||||++.-..|..                                     
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            346788889999999999999999  78999999998663333                                     


Q ss_pred             ----------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           94 ----------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        94 ----------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                            ..+..|+.++++||.|||   .+|.||||||+.||||+.+|.+||+|||.+..+.+..
T Consensus       104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence                                  455678999999999999   9999999999999999999999999999887765544


Q ss_pred             ccccCC-CCcccCccccccccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          152 THINDS-NRVIGTFGFMAPEYRTTG--DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       152 ~~~~~~-~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ...... .+++||+.|||||++...  .|+.|+||||||++..|+.+|..||....        ........+.+ ..+.
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p--------PmkvLl~tLqn-~pp~  251 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP--------PMKVLLLTLQN-DPPT  251 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC--------hHHHHHHHhcC-CCCC
Confidence            333322 557999999999996543  69999999999999999999999996432        11222222211 1111


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..-..+      ...........+.+++..||..||.+|||++++++
T Consensus       252 ~~t~~~------~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  252 LLTSGL------DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             cccccC------ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            111111      11223334446889999999999999999999875

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-39  Score=276.40  Aligned_cols=190  Identities=25%  Similarity=0.335  Sum_probs=154.9

Q ss_pred             CCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------CCCc------------
Q 039895           60 GKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------FPFS------------   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------~~~~------------   93 (284)
                      .+-||+|+.|.||.|++.++.||||+++.-                                  ||..            
T Consensus       129 LeWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~  208 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRP  208 (904)
T ss_pred             hhhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCc
Confidence            457999999999999999999999998643                                  3433            


Q ss_pred             ---hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccc
Q 039895           94 ---VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPE  170 (284)
Q Consensus        94 ---~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  170 (284)
                         ...+.+..+||.|+.|||   .+.|||||||+-||||..+..+||+|||.++......+.    ..+.||..|||||
T Consensus       209 itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STk----MSFaGTVaWMAPE  281 (904)
T KOG4721|consen  209 ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTK----MSFAGTVAWMAPE  281 (904)
T ss_pred             cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhh----hhhhhhHhhhCHH
Confidence               445678999999999999   999999999999999999999999999999877654322    2278999999999


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHH
Q 039895          171 YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLL  250 (284)
Q Consensus       171 ~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (284)
                      ++...+.+.|+|||||||+||||+||..|+....     .. .+  ++.               .+......|.+..|+.
T Consensus       282 vIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd-----ss-AI--IwG---------------VGsNsL~LpvPstcP~  338 (904)
T KOG4721|consen  282 VIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD-----SS-AI--IWG---------------VGSNSLHLPVPSTCPD  338 (904)
T ss_pred             HhhcCCcccccceehhHHHHHHHHhcCCCccccc-----hh-ee--EEe---------------ccCCcccccCcccCch
Confidence            9999999999999999999999999999985422     00 00  000               0111222345667777


Q ss_pred             HHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          251 ICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       251 ~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .+.-|+..||+..|.+||++.+++.+|.-
T Consensus       339 GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  339 GFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             HHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            88899999999999999999999998863

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-38  Score=261.49  Aligned_cols=198  Identities=25%  Similarity=0.348  Sum_probs=149.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      .++...+.||+|+||+||.+..  +|...|||.+...                                           
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            4567788999999999999999  5899999987652                                           


Q ss_pred             CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccccCCCCc
Q 039895           90 FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |+                .+.....+..||++||.|||   +++||||||||+|||++. ++.+||+|||+++.......
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            11                11456789999999999999   999999999999999999 79999999999987764222


Q ss_pred             cccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      .........||+.|||||++..+ ....++||||+||++.||+||++||...       ......+-........+.+  
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~~~~~~~ig~~~~~P~i--  244 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEEAEALLLIGREDSLPEI--  244 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cchHHHHHHHhccCCCCCC--
Confidence            21222237899999999999854 3345999999999999999999998642       1111111111111112211  


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                                   +...+....+++.+|+..+|+.||||.++++..
T Consensus       245 -------------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  245 -------------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             -------------CcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence                         222344478999999999999999999998754

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.9e-38  Score=255.12  Aligned_cols=211  Identities=18%  Similarity=0.208  Sum_probs=153.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.|++|+||.||+|.+  ++..||+|+++..                                          
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            35677788999999999999999  8999999999765                                          


Q ss_pred             ---CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         ||..               .+...++.|+++|++|||   ...|+||||||+|+|++..|.+||+|||+|+.+.+..
T Consensus       155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence               2211               456679999999999999   9999999999999999999999999999999987663


Q ss_pred             ccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh--cCcccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE--NESFKE  228 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  228 (284)
                      ...   +..+-|.+|+|||.+.+. .|+++.|+||+|||+.|++++++.|.+..    +...+...+.....  ...++.
T Consensus       232 k~~---T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s----E~dQl~~If~llGtPte~iwpg  304 (419)
T KOG0663|consen  232 KPY---TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS----EIDQLDKIFKLLGTPSEAIWPG  304 (419)
T ss_pred             ccC---cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc----hHHHHHHHHHHhCCCccccCCC
Confidence            221   225679999999998876 59999999999999999999999887543    22222222222111  111221


Q ss_pred             cccccccC------C-CC---CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          229 IVDPAIVG------E-EG---LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~------~-~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .......+      . ++   ..++... ....-.+|+...|.+||.+|.|+.|.++
T Consensus       305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  305 YSELPAVKKMTFSEHPYNNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             ccccchhhccccCCCCchhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhc
Confidence            11111000      0 00   0011110 2244678999999999999999999875

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-37  Score=267.15  Aligned_cols=192  Identities=21%  Similarity=0.309  Sum_probs=154.9

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |..-.+||+|..|.||.+..  .+..||||.+...                                             
T Consensus       275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g  354 (550)
T KOG0578|consen  275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG  354 (550)
T ss_pred             hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence            55556899999999999998  8889999998755                                             


Q ss_pred             ----------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           90 ----------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        90 ----------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                ...+.+...|+.+++.||+|||   .++|+|||||.+|||++.+|.+||+|||++..+.....   ...+
T Consensus       355 gsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---KR~T  428 (550)
T KOG0578|consen  355 GSLTDVVTKTRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---KRST  428 (550)
T ss_pred             CchhhhhhcccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC---cccc
Confidence                      1122677889999999999999   99999999999999999999999999999988765544   3344


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      .+|||.|||||+.....|++++||||||++++||+-|.+||..+.       .+.... ....++ .+++          
T Consensus       429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~-------PlrAly-LIa~ng-~P~l----------  489 (550)
T KOG0578|consen  429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN-------PLRALY-LIATNG-TPKL----------  489 (550)
T ss_pred             ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC-------hHHHHH-HHhhcC-CCCc----------
Confidence            899999999999999999999999999999999999999997432       111111 111111 1111          


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                         .........+.+++.+||+.|+++||++.|+|++
T Consensus       490 ---k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  490 ---KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             ---CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence               1234555668999999999999999999999863

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-36  Score=257.07  Aligned_cols=206  Identities=17%  Similarity=0.249  Sum_probs=157.3

Q ss_pred             CCcceecHHHHHHHhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC------------------------------
Q 039895           40 NPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------------   89 (284)
Q Consensus        40 ~~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------------   89 (284)
                      ..++.++.+++     +......||+|++|.||+|.++|+.||||.+...                              
T Consensus        10 ~~~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~   84 (283)
T PHA02988         10 NDIKCIESDDI-----DKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY   84 (283)
T ss_pred             CcceecCHHHc-----CCCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            34556677776     3334478999999999999999999999998643                              


Q ss_pred             ------------------CCCc---------------hhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCc
Q 039895           90 ------------------FPFS---------------VSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENV  135 (284)
Q Consensus        90 ------------------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~  135 (284)
                                        +|..               ...+.++.+++.||.|||   . .+++||||||+|||++.++.
T Consensus        85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~  161 (283)
T PHA02988         85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYK  161 (283)
T ss_pred             eeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCc
Confidence                              1110               456789999999999999   6 48899999999999999999


Q ss_pred             ceeeccccccccCCCCccccCCCCcccCccccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          136 AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       136 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      +||+|||+++.......      ...|++.|+|||++.+  ..++.++|||||||++|||++|..||....        .
T Consensus       162 ~kl~dfg~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~--------~  227 (283)
T PHA02988        162 LKIICHGLEKILSSPPF------KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT--------T  227 (283)
T ss_pred             EEEcccchHhhhccccc------cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC--------H
Confidence            99999999876643322      1468899999999876  678999999999999999999999986432        1


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      ............ .              ++.+..++..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus       228 ~~~~~~i~~~~~-~--------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        228 KEIYDLIINKNN-S--------------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHHHHHHhcCC-C--------------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            111111111110 0              00111234458899999999999999999999999998753

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-36  Score=266.54  Aligned_cols=216  Identities=18%  Similarity=0.178  Sum_probs=151.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------CC------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------FP------   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------~~------   91 (284)
                      ++|+..+.||+|+||.||++..  +++.||+|.....                                   ++      
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~  171 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYC  171 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCCCCHHH
Confidence            5688899999999999999998  7889999987543                                   00      


Q ss_pred             --------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccC
Q 039895           92 --------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGT  163 (284)
Q Consensus        92 --------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt  163 (284)
                              .....+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........  ......||
T Consensus       172 ~l~~~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~--~~~~~~gt  246 (391)
T PHA03212        172 YLAAKRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN--KYYGWAGT  246 (391)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc--ccccccCc
Confidence                    01456789999999999999   999999999999999999999999999998654322111  11225799


Q ss_pred             ccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc---cccHHHHHHHHhh-cCccc--------ccc-
Q 039895          164 FGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE---DYRLQDLVKKYIE-NESFK--------EIV-  230 (284)
Q Consensus       164 ~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~--------~~~-  230 (284)
                      +.|+|||++.+..++.++|||||||++|||++|..|+......+..   ...+...+..... ...+.        ... 
T Consensus       247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~  326 (391)
T PHA03212        247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI  326 (391)
T ss_pred             cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence            9999999999889999999999999999999999887643211111   0111111111000 00000        000 


Q ss_pred             ----cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 ----DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          ...........+......+..+.+|+.+||+.||++|||+.|+++
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                000000001112222234556889999999999999999999985

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-37  Score=257.31  Aligned_cols=208  Identities=20%  Similarity=0.288  Sum_probs=150.0

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--CCCc--------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--FPFS--------------------------------------   93 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~--------------------------------------   93 (284)
                      .|...+++|.|+||.||+|..  ++..||||+....  ++..                                      
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym  104 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM  104 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence            355678999999999999999  7789999988655  1100                                      


Q ss_pred             --------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-CcceeeccccccccCCCCc
Q 039895           94 --------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        94 --------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~~~~~~~~  152 (284)
                                          ....-+..||.+||.|||   +.+|+||||||+|+|+|.+ |.+||||||.|+.+..+..
T Consensus       105 P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep  181 (364)
T KOG0658|consen  105 PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP  181 (364)
T ss_pred             hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence                                122347999999999999   9999999999999999965 9999999999999866543


Q ss_pred             cccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc--------
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN--------  223 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------  223 (284)
                      ..    +...|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|.+..    ....+...+.-...+        
T Consensus       182 ni----SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s----~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  182 NI----SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS----SVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             ce----eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC----HHHHHHHHHHHhCCCCHHHHhhc
Confidence            32    25679999999988765 69999999999999999999999987633    222222222221111        


Q ss_pred             -CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 -ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ....+...+.+....... -......++..+|+.++|.++|.+|.++.|++.
T Consensus       254 n~~y~~~~~p~ik~~~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             CcccccccCccccccccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence             011111122222211000 012233445789999999999999999999874

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=8.1e-37  Score=258.82  Aligned_cols=211  Identities=20%  Similarity=0.251  Sum_probs=149.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  ++..||+|++...                                           
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            4678889999999999999999  6789999988643                                           


Q ss_pred             CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|.               ......++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++..........
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence            110               1456779999999999999   9999999999999999999999999999998765432221


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH------------hh
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY------------IE  222 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------~~  222 (284)
                      .  ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....    ...+.. +...            ..
T Consensus       158 ~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~  230 (287)
T cd07848         158 Y--TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESE----IDQLFT-IQKVLGPLPAEQMKLFYS  230 (287)
T ss_pred             c--cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCH----HHHHHH-HHHhhCCCCHHHHHhhhc
Confidence            1  125689999999999888899999999999999999999999865321    000100 0000            00


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .........+................+..+.+|+.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00000000000000000000001123456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-37  Score=254.86  Aligned_cols=215  Identities=17%  Similarity=0.195  Sum_probs=153.1

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC--------------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF--------------------------------------   90 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--------------------------------------   90 (284)
                      -.+...|...+.||+|+||.|..+..  +|..||||++...+                                      
T Consensus        18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~   97 (359)
T KOG0660|consen   18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK   97 (359)
T ss_pred             EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence            33445566678899999999999999  89999999987430                                      


Q ss_pred             ------------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           91 ------------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        91 ------------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                                              ..+.....++.|++.||.|+|   +.+|+||||||+|+|++.+..+||+|||+|+.
T Consensus        98 f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen   98 FNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARY  174 (359)
T ss_pred             cceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceee
Confidence                                    011334568999999999999   99999999999999999999999999999999


Q ss_pred             cCCCCccccCCCCcccCcccccccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      .... ......+..+.|.+|.|||++. ...|+.+.||||+|||+.||++|++.|.+...     ......+......+.
T Consensus       175 ~~~~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~-----v~Ql~lI~~~lGtP~  248 (359)
T KOG0660|consen  175 LDKF-FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY-----VHQLQLILELLGTPS  248 (359)
T ss_pred             cccc-CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch-----HHHHHHHHHhcCCCC
Confidence            8654 2222324477899999999865 45799999999999999999999999876431     111111111111110


Q ss_pred             -----------ccccccccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 -----------FKEIVDPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 -----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 ....+. .+.......+ ...+...+..++|+.+||..||.+|+|++|+++
T Consensus       249 ~e~l~~i~s~~ar~yi~-slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  249 EEDLQKIRSEKARPYIK-SLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             HHHHHHhccHHHHHHHH-hCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                       000000 0000111111 011233445789999999999999999999875

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=5e-37  Score=253.19  Aligned_cols=209  Identities=16%  Similarity=0.203  Sum_probs=149.1

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------CC-Cc------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------FP-FS------------------   93 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------~~-~~------------------   93 (284)
                      |...++||+|+||+||+|..  +|+.||+|++.-.                      .| ..                  
T Consensus        13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l   92 (323)
T KOG0594|consen   13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL   92 (323)
T ss_pred             HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence            44445799999999999999  8999999998644                      11 00                  


Q ss_pred             ---------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           94 ---------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        94 ---------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                                                 .....++.||+.||+|||   +.+|+||||||+||||+++|.+||+|||+|+.
T Consensus        93 ~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   93 YLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             EEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence                                       246789999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh---
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE---  222 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---  222 (284)
                      ..-....   .+..++|.+|+|||++.+. .|++..||||+||++.||+++++.|.+..    + ......+-....   
T Consensus       170 ~~ip~~~---yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s----e-~~ql~~If~~lGtP~  241 (323)
T KOG0594|consen  170 FSIPMRT---YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS----E-IDQLFRIFRLLGTPN  241 (323)
T ss_pred             hcCCccc---ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc----H-HHHHHHHHHHcCCCC
Confidence            6532221   1226789999999998877 69999999999999999999998887643    1 111111111111   


Q ss_pred             cCcccccccccccCCCCCCCh----hhH---HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWP----EKE---QQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ...++....-.-....-..+.    ...   .......+++.+||+++|.+|.|+..++.+
T Consensus       242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            122222211000000000111    001   111357899999999999999999999875

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.6e-36  Score=257.02  Aligned_cols=192  Identities=22%  Similarity=0.313  Sum_probs=145.4

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .|...+.||+|+||+||+|..  +|+.||+|.+...                                            
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            366678999999999999998  7899999987532                                            


Q ss_pred             CCC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 FPF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ~~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      +|.                 ......++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++........
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET  157 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence            110                 1355678999999999999   99999999999999999999999999999977643322


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .    ....||+.|+|||++.+..++.++|||||||++|+|++|..||.....     ......+......... . .  
T Consensus       158 ~----~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~-~-~--  224 (285)
T cd05631         158 V----RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKE-----RVKREEVDRRVKEDQE-E-Y--  224 (285)
T ss_pred             e----cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCc-----chhHHHHHHHhhcccc-c-C--
Confidence            1    125689999999999998999999999999999999999999975331     1111111111111000 0 0  


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                                  .......+.+|+.+||+.||.+||+     ++++++
T Consensus       225 ------------~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         225 ------------SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             ------------CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence                        1112334789999999999999997     788775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.4e-36  Score=274.10  Aligned_cols=146  Identities=17%  Similarity=0.268  Sum_probs=120.0

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------   89 (284)
                      ++...+++|...++||+|+||+||+|..  .+..||||++...                                     
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3444567888889999999999999998  6789999998531                                     


Q ss_pred             ----------CC--------------CchhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCC----------
Q 039895           90 ----------FP--------------FSVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEEN----------  134 (284)
Q Consensus        90 ----------~~--------------~~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~----------  134 (284)
                                ++              .......++.||+.||.|||   . .+||||||||+|||++.++          
T Consensus       203 ~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~  279 (467)
T PTZ00284        203 ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRA  279 (467)
T ss_pred             CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccc
Confidence                      00              00345678999999999999   7 5999999999999998765          


Q ss_pred             ------cceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          135 ------VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       135 ------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                            .+||+|||.+.......      ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       280 ~~~~~~~vkl~DfG~~~~~~~~~------~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~  348 (467)
T PTZ00284        280 LPPDPCRVRICDLGGCCDERHSR------TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH  348 (467)
T ss_pred             cCCCCceEEECCCCccccCcccc------ccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                  48999999875432221      2267999999999999999999999999999999999999999653

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=3.6e-36  Score=272.21  Aligned_cols=200  Identities=22%  Similarity=0.260  Sum_probs=152.7

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------   89 (284)
                      +.....+.|...+.||+|+||+||+|..  +|+.||||++...                                     
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence            3444557899999999999999999998  8899999987532                                     


Q ss_pred             --------------CCCc-------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 --------------FPFS-------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 --------------~~~~-------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                                    ++..                   .....++.|++.||.|||   +.+|+||||||+|||++.++.+
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~v  182 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLV  182 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCE
Confidence                          0000                   234568899999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL  216 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~  216 (284)
                      ||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|..||....        ....
T Consensus       183 kL~DFGls~~~~~~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~--------~~~~  253 (496)
T PTZ00283        183 KLGDFGFSKMYAATVSDD-VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN--------MEEV  253 (496)
T ss_pred             EEEecccCeecccccccc-ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------HHHH
Confidence            999999997764332211 1123679999999999999899999999999999999999999986432        1222


Q ss_pred             HHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ...... +...               +.+...+..+.+++.+||+.+|.+||++.++++.
T Consensus       254 ~~~~~~-~~~~---------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        254 MHKTLA-GRYD---------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHhc-CCCC---------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            222111 1110               0111223458899999999999999999999864

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=6.4e-36  Score=253.68  Aligned_cols=209  Identities=19%  Similarity=0.236  Sum_probs=147.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe---CCcceEEEeecCC---------------------------------CC-------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL---QDRPISVMKFEDT---------------------------------FP-------   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~---------------------------------~~-------   91 (284)
                      +.|...+.||+|+||.||+|..   ++..||+|++...                                 .|       
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            3577788999999999999987   4678999987532                                 00       


Q ss_pred             ---------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           92 ---------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        92 ---------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                                                 .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~  157 (290)
T cd07862          81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA  157 (290)
T ss_pred             CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence                                       00355779999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh--
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE--  222 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--  222 (284)
                      ........    .....||+.|+|||++....++.++|||||||++|||++|.+||....     .......+.....  
T Consensus       158 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~-----~~~~~~~i~~~~~~~  228 (290)
T cd07862         158 RIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-----DVDQLGKILDVIGLP  228 (290)
T ss_pred             EeccCCcc----cccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHHhCCC
Confidence            76643311    122568999999999988889999999999999999999999986532     1111111111110  


Q ss_pred             -cCcccccc---cccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 -NESFKEIV---DPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 -~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ...++...   ...+......... ........+.+++.+||+.||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             00010000   0000000000000 01123345779999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=9.4e-36  Score=255.85  Aligned_cols=200  Identities=21%  Similarity=0.340  Sum_probs=150.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc----ceEEEeecCC-----------------------------CCC-------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR----PISVMKFEDT-----------------------------FPF-------   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~-----------------------------~~~-------   92 (284)
                      ++|+..+.||+|+||.||+|.+  ++.    .||+|++...                             +|.       
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            5688899999999999999987  444    3899998633                             000       


Q ss_pred             ---------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           93 ---------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        93 ---------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                           ....+.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence                                 0345688999999999999   9999999999999999999999999999998775433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ..... ....++..|+|||++....++.++|||||||++||+++ |..||....        ..... ........    
T Consensus       164 ~~~~~-~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~--------~~~~~-~~~~~~~~----  229 (316)
T cd05108         164 KEYHA-EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--------ASEIS-SILEKGER----  229 (316)
T ss_pred             cceec-cCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHH-HHHhCCCC----
Confidence            22111 11234678999999998899999999999999999998 888875422        11111 11111100    


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                 ++.+..+...+.+++.+||+.+|++|||+.+++..|..+..
T Consensus       230 -----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         230 -----------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             -----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence                       00111222347899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=8.9e-36  Score=253.48  Aligned_cols=162  Identities=15%  Similarity=0.160  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc----ccCCCCcccCcccccccc
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH----INDSNRVIGTFGFMAPEY  171 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~  171 (284)
                      ...++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+++.+......    ........||+.|+|||+
T Consensus       128 ~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~  204 (294)
T PHA02882        128 IKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDA  204 (294)
T ss_pred             HHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHH
Confidence            4568999999999999   999999999999999999999999999999876432211    111122469999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHH
Q 039895          172 RTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLI  251 (284)
Q Consensus       172 ~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
                      ..+..++.++|||||||+++||++|..||.....  .  ...........    ...+....+.         ...++..
T Consensus       205 ~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~--~--~~~~~~~~~~~----~~~~~~~~~~---------~~~~~~~  267 (294)
T PHA02882        205 HNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH--N--GNLIHAAKCDF----IKRLHEGKIK---------IKNANKF  267 (294)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc--c--hHHHHHhHHHH----HHHhhhhhhc---------cCCCCHH
Confidence            9999999999999999999999999999965421  1  11111000000    0000000000         0112345


Q ss_pred             HHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          252 CTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       252 ~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                      +.+++..||..+|++||++.++++.|
T Consensus       268 ~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        268 IYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            88999999999999999999998876

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-36  Score=241.63  Aligned_cols=178  Identities=21%  Similarity=0.284  Sum_probs=143.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||.|+||+|..++.  +|..+|+|++...                                           
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            5677788999999999999998  8999999999876                                           


Q ss_pred             ----------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 ----------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ----------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                      ...+....-+|.||+.||+|||   +.+|++|||||+|||+|.+|.+||+|||+|+....... 
T Consensus       124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~-  199 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW-  199 (355)
T ss_pred             eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEE-
Confidence                            1111455679999999999999   99999999999999999999999999999988765422 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh-cCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE-NESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  232 (284)
                           +.+|||.|+|||++...+|+.++|-|||||++|||+.|.+||+...     .   ......... .-.++..+  
T Consensus       200 -----TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~-----~---~~iY~KI~~~~v~fP~~f--  264 (355)
T KOG0616|consen  200 -----TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN-----P---IQIYEKILEGKVKFPSYF--  264 (355)
T ss_pred             -----EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC-----h---HHHHHHHHhCcccCCccc--
Confidence                 2789999999999999999999999999999999999999998654     1   111222211 11222222  


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCC
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR  267 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  267 (284)
                                      ...+.+|+...|+.|-.+|
T Consensus       265 ----------------s~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  265 ----------------SSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             ----------------CHHHHHHHHHHHhhhhHhh
Confidence                            2236789999999988888

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.4e-37  Score=277.18  Aligned_cols=198  Identities=25%  Similarity=0.334  Sum_probs=161.9

Q ss_pred             CCCCeeeecCCceEEEEEeC-------CcceEEEeecCC-----------------------------C-----------
Q 039895           58 DGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT-----------------------------F-----------   90 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~-----------------------------~-----------   90 (284)
                      ...+.||+|.||.||+|...       ...||||.++..                             .           
T Consensus       489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF  568 (774)
T KOG1026|consen  489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF  568 (774)
T ss_pred             eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence            34568999999999999982       356999999876                             0           


Q ss_pred             -------------------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceee
Q 039895           91 -------------------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF  139 (284)
Q Consensus        91 -------------------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~  139 (284)
                                                     ....+.+.||.|||.|+.||-   +..+|||||-.+|+|+.++..+||+
T Consensus       569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIs  645 (774)
T KOG1026|consen  569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKIS  645 (774)
T ss_pred             EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEEEec
Confidence                                           111578999999999999999   9999999999999999999999999


Q ss_pred             ccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHH
Q 039895          140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       140 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      |||+++...+..++..... ..-+..|||||.+..++|+++||||||||+|||+++ |+.|+++..        -. .+-
T Consensus       646 DfGLsRdiYssDYYk~~~~-t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--------n~-EVI  715 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYKVRGN-TLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--------NQ-EVI  715 (774)
T ss_pred             ccccchhhhhhhhhcccCC-ceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc--------hH-HHH
Confidence            9999999887776654422 234789999999999999999999999999999998 788887543        11 122


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..+..+.+               ++-+..|+.++.+||..||+.+|.+||+++||-..|+..-+.
T Consensus       716 e~i~~g~l---------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  716 ECIRAGQL---------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             HHHHcCCc---------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            22233332               233567888899999999999999999999999999987653

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=4.3e-36  Score=260.15  Aligned_cols=211  Identities=18%  Similarity=0.255  Sum_probs=145.5

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||.||+|..  +|..||+|++...                                             
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            56678999999999999998  7899999987532                                             


Q ss_pred             ---CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 ---FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ---~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                         +|..              .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus        82 v~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          82 VFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             EEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence               1100              445678999999999999   99999999999999999999999999999976533222


Q ss_pred             cccCCCCcccCccccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-------
Q 039895          153 HINDSNRVIGTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-------  223 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------  223 (284)
                      .........||+.|+|||++.+  ..++.++|||||||++|||++|+.||.....     ......+......       
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~  233 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV-----VHQLDLITDLLGTPSPETIS  233 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh-----HHHHHHHHHHhCCCCHHHHH
Confidence            1111122578999999999865  5789999999999999999999999864321     1111111110000       


Q ss_pred             ----CcccccccccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 ----ESFKEIVDPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                          ......+.. +......... ........+.+++.+||+.||++|||+.|+++.
T Consensus       234 ~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         234 RVRNEKARRYLSS-MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HhhhhhHHHHHHh-hcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                000000000 0000000000 001123447899999999999999999999853

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.1e-35  Score=257.50  Aligned_cols=162  Identities=23%  Similarity=0.383  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      +..++.||+.||.|||   +.+|+||||||+|||++.++.++|+|||++..+........ .....++..|+|||++.+.
T Consensus       175 ~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  250 (337)
T cd05054         175 LISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPESIFDK  250 (337)
T ss_pred             HHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhh-ccCCCCCccccCcHHhcCC
Confidence            4568899999999999   99999999999999999999999999999987644332211 1124567789999999999


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++|||||||++|||++ |..||.....  .  ..    .......+....               .+......+.+
T Consensus       251 ~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~--~--~~----~~~~~~~~~~~~---------------~~~~~~~~~~~  307 (337)
T cd05054         251 VYTTQSDVWSFGVLLWEIFSLGASPYPGVQI--D--EE----FCRRLKEGTRMR---------------APEYATPEIYS  307 (337)
T ss_pred             CCCccccHHHHHHHHHHHHHcCCCCCCCCCc--c--HH----HHHHHhccCCCC---------------CCccCCHHHHH
Confidence            99999999999999999998 8888754220  0  00    111111111000               01122344789


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                      ++.+||+.+|++||++.||++.|+++++.|
T Consensus       308 l~~~cl~~~p~~RPs~~ell~~l~~~~~~~  337 (337)
T cd05054         308 IMLDCWHNNPEDRPTFSELVEILGDLLQEN  337 (337)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3.9e-36  Score=254.93  Aligned_cols=208  Identities=14%  Similarity=0.213  Sum_probs=146.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|...+.||+|+||.||+|..  ++..||+|++...                                          +
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            4678888999999999999998  7889999988632                                          1


Q ss_pred             C---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 P---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |               .......++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++........  
T Consensus        85 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~--  159 (288)
T cd07871          85 LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT--  159 (288)
T ss_pred             CCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc--
Confidence            1               01345678999999999999   999999999999999999999999999998765432211  


Q ss_pred             CCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc---Ccccc---
Q 039895          156 DSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN---ESFKE---  228 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---  228 (284)
                       .....|++.|+|||++.+ ..++.++||||+||++|+|++|..||....     .......+......   ..++.   
T Consensus       160 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07871         160 -YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST-----VKEELHLIFRLLGTPTEETWPGITS  233 (288)
T ss_pred             -ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChHHhhcccc
Confidence             112467999999998865 468999999999999999999999986532     11111111111110   00111   


Q ss_pred             ------cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          229 ------IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       229 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            ...+.....  ............+.+|+.+||+.||.+|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         234 NEEFRSYLFPQYRAQ--PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             chhhhccccCccCCC--chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                  111100000  000000112334789999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=5.9e-36  Score=267.56  Aligned_cols=210  Identities=17%  Similarity=0.246  Sum_probs=145.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      ..+|...+.||+|+||.||+|..  +++.||||++...                                          
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~l  144 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNV  144 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEE
Confidence            35688899999999999999998  7889999987532                                          


Q ss_pred             ---CCCc------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeecccccccc
Q 039895           90 ---FPFS------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSI  147 (284)
Q Consensus        90 ---~~~~------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~  147 (284)
                         +|..                  .....++.||+.||+|||   +.+|+||||||+|||++.++ .+||+|||+++.+
T Consensus       145 vmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~  221 (440)
T PTZ00036        145 VMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL  221 (440)
T ss_pred             EEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence               0000                  234567889999999999   99999999999999999665 7999999999876


Q ss_pred             CCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc---
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN---  223 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---  223 (284)
                      ......    ....||+.|+|||++.+. .++.++|||||||++|||++|.+||.+..    ....+...+......   
T Consensus       222 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~----~~~~~~~i~~~~~~p~~~  293 (440)
T PTZ00036        222 LAGQRS----VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS----SVDQLVRIIQVLGTPTED  293 (440)
T ss_pred             cCCCCc----ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHHhCCCCHH
Confidence            543221    125689999999987654 68999999999999999999999986532    111111111110000   


Q ss_pred             ------CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 ------ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            ..+..+.-+..... ......+...+..+.+|+.+||..||.+|||+.|+++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~-~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        294 QLKEMNPNYADIKFPDVKPK-DLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHHHhchhhhcccCCccCch-hHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence                  00000000000000 0000001112345889999999999999999999984

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-36  Score=253.77  Aligned_cols=200  Identities=21%  Similarity=0.317  Sum_probs=155.8

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------   89 (284)
                      .+..|.|.....||+|.||.|-+|+.  +++.||+|++.+.                                       
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            34567899999999999999999999  8999999999765                                       


Q ss_pred             ------------------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 ------------------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 ------------------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                                        ||..               .+..+++.+++.||.|||   .++||||||||+|+|++++|++
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~V  249 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTV  249 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcE
Confidence                              2211               567889999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCcc--ccCCCCcccCccccccccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          137 QLFDFTLSLSIPEGETH--INDSNRVIGTFGFMAPEYRTTGD----FSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      ||+|||.+.....+...  .......+|||.|+|||.+.++.    .+.+.||||+||+||.++.|+-||.+..      
T Consensus       250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~------  323 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF------  323 (576)
T ss_pred             EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch------
Confidence            99999999877443211  11112368999999999987732    3578999999999999999999997543      


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                        .........         ..      ...+|..++....+.+|+.++|+.||+.|.++.+|..+
T Consensus       324 --~~~l~~KIv---------n~------pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  324 --ELELFDKIV---------ND------PLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             --HHHHHHHHh---------cC------cccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence              122221111         11      12233344555668899999999999999999998643

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=2e-35  Score=259.22  Aligned_cols=159  Identities=20%  Similarity=0.363  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      .++++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......... .....+++.|+|||++...
T Consensus       214 ~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  289 (374)
T cd05106         214 LLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV-KGNARLPVKWMAPESIFDC  289 (374)
T ss_pred             HHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee-ccCCCCccceeCHHHhcCC
Confidence            3578999999999999   99999999999999999999999999999977644322111 1113456789999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++|||||||++|||++ |..||.....    .......    ...+ . ....             +...+..+.+
T Consensus       290 ~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~----~~~~~~~----~~~~-~-~~~~-------------~~~~~~~l~~  346 (374)
T cd05106         290 VYTVQSDVWSYGILLWEIFSLGKSPYPGILV----NSKFYKM----VKRG-Y-QMSR-------------PDFAPPEIYS  346 (374)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCccccc----cHHHHHH----HHcc-c-CccC-------------CCCCCHHHHH
Confidence            99999999999999999997 9998864320    0011111    1110 0 0000             0011234789


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      ++.+||+.||++|||+.+|++.|+++.
T Consensus       347 li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         347 IMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-35  Score=251.80  Aligned_cols=188  Identities=22%  Similarity=0.292  Sum_probs=145.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|+.||+|++...                                           
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            3677889999999999999998  6899999998532                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++........ 
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~-  156 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW-  156 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcc-
Confidence             1111               345678999999999999   99999999999999999999999999999877643221 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                           ...||+.|+|||++.+..++.++|||||||++|+|++|..||....        .......... ...      .
T Consensus       157 -----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~--------~~~~~~~i~~-~~~------~  216 (291)
T cd05612         157 -----TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN--------PFGIYEKILA-GKL------E  216 (291)
T ss_pred             -----cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CCc------C
Confidence                 2568999999999998889999999999999999999999986432        1111111111 110      0


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~~  276 (284)
                      +          +......+.+|+.+||+.||.+||+     +.++++.
T Consensus       217 ~----------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         217 F----------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             C----------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            0          0111234789999999999999995     8887653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-35  Score=255.58  Aligned_cols=191  Identities=25%  Similarity=0.310  Sum_probs=151.2

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      ...+.|...+.||+|+||.|+.|..  ++..||+|++...                                        
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3456888999999999999999988  8899999976552                                        


Q ss_pred             -------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-Ccceeeccccccc
Q 039895           90 -------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLS  146 (284)
Q Consensus        90 -------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~~  146 (284)
                             ||..               .....++.|++.|++|||   +.+|+||||||+|||++.+ +.+||+|||++..
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~  170 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAI  170 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence                   1211               356679999999999999   9999999999999999999 9999999999988


Q ss_pred             cC-CCCccccCCCCcccCccccccccccCCC-CC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh-
Q 039895          147 IP-EGETHINDSNRVIGTFGFMAPEYRTTGD-FS-EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE-  222 (284)
Q Consensus       147 ~~-~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-  222 (284)
                      .. ...    ...+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||....        .......... 
T Consensus       171 ~~~~~~----~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--------~~~l~~ki~~~  238 (370)
T KOG0583|consen  171 SPGEDG----LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--------VPNLYRKIRKG  238 (370)
T ss_pred             cCCCCC----cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcC
Confidence            74 221    122378999999999999877 86 78999999999999999999997522        2222222111 


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                      .-.++.+++                 ...+..|+.+||..+|.+|+|+.+|+
T Consensus       239 ~~~~p~~~~-----------------S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  239 EFKIPSYLL-----------------SPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             CccCCCCcC-----------------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            111222221                 34478999999999999999999998

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-36  Score=264.29  Aligned_cols=187  Identities=21%  Similarity=0.260  Sum_probs=149.3

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------CCCc------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------FPFS------   93 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------~~~~------   93 (284)
                      ..++|....+||+|+||.|+.+..  +++.+|||++++.                               .|+.      
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            447888899999999999999999  8889999999887                               1111      


Q ss_pred             ----------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           94 ----------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        94 ----------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                            ....-+|..|+.||+|||   +++||+||||.+|||+|..|.+||+|||+++...-..
T Consensus       446 fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g  522 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG  522 (694)
T ss_pred             EEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCCCC
Confidence                                  445568999999999999   9999999999999999999999999999997654221


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                         ..+.+++|||.|||||++.+..|+.++|-|||||++|||+.|..||.+..    +    .             +++|
T Consensus       523 ---~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd----E----e-------------e~Fd  578 (694)
T KOG0694|consen  523 ---DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD----E----E-------------EVFD  578 (694)
T ss_pred             ---CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC----H----H-------------HHHH
Confidence               12344899999999999999999999999999999999999999997643    1    1             1111


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                      ..+..+.    .-+...+.+..+|+.++|..+|++|..+
T Consensus       579 sI~~d~~----~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  579 SIVNDEV----RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHhcCCC----CCCCcccHHHHHHHHHHhccCcccccCC
Confidence            1111110    0122334457899999999999999865

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-35  Score=248.28  Aligned_cols=244  Identities=21%  Similarity=0.319  Sum_probs=174.0

Q ss_pred             CchHHHHHHHHhh--CCCCCCcceecHHHHHHHhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC-----------
Q 039895           23 NGKILLEKLIASS--NGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT-----------   89 (284)
Q Consensus        23 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----------   89 (284)
                      .+...+.+++...  +|+.++++.+-...+...   ....+.||+|.||.||+|.|.|..||||+|...           
T Consensus       180 ~~~stl~Dll~~~~tSGSGSGlplLVQRTiarq---I~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEI  256 (513)
T KOG2052|consen  180 AGDSTLKDLLDDLETSGSGSGLPLLVQRTIARQ---IVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEI  256 (513)
T ss_pred             cCCccHHHHHHhhccCCCCCCchhHhHHhhhhe---eEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHH
Confidence            3445566666444  566677776655555443   345678999999999999999999999999766           


Q ss_pred             -----------------------C------------------------CCchhHHHHHHHHHHHHHHhcc-----CCCCC
Q 039895           90 -----------------------F------------------------PFSVSKLKIAIEIASAVAYLHV-----GFSRP  117 (284)
Q Consensus        90 -----------------------~------------------------~~~~~~~~i~~~i~~gL~~LH~-----~~~~~  117 (284)
                                             .                        -.....++++..+|.||++||.     +..+.
T Consensus       257 YqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPa  336 (513)
T KOG2052|consen  257 YQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPA  336 (513)
T ss_pred             HHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCch
Confidence                                   0                        0005678999999999999993     33678


Q ss_pred             eeecccccCcEEEecCCcceeeccccccccCCC-CccccCCCCcccCccccccccccCCC----C--CcchhHHHHHHHH
Q 039895          118 VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG-ETHINDSNRVIGTFGFMAPEYRTTGD----F--SEKSDVYSFGALL  190 (284)
Q Consensus       118 ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~~DvwS~G~il  190 (284)
                      |.|||||+.|||+.+++++.|+|+|+|....+. ..........+||..|||||++...-    +  -..+||||||.++
T Consensus       337 IAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl  416 (513)
T KOG2052|consen  337 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL  416 (513)
T ss_pred             hhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence            999999999999999999999999999877654 33333344578999999999986542    2  1469999999999


Q ss_pred             HHHHhC----------CCCCCCCCCCCCccccHHHHHHHHhhcCccccc-ccccccCCCCCCChhhHHHHHHHHHHHHHh
Q 039895          191 LELLTG----------KKISYSSHFDDGEDYRLQDLVKKYIENESFKEI-VDPAIVGEEGLMWPEKEQQLLICTELAFKC  259 (284)
Q Consensus       191 ~elltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  259 (284)
                      ||+...          +.||++.-..+..   ..          .+.++ ....+....+.+|.. .+.+..+.+||..|
T Consensus       417 WEiarRc~~ggi~eey~~Pyyd~Vp~DPs---~e----------eMrkVVCv~~~RP~ipnrW~s-~~~l~~m~klMkeC  482 (513)
T KOG2052|consen  417 WEIARRCESGGIVEEYQLPYYDVVPSDPS---FE----------EMRKVVCVQKLRPNIPNRWKS-DPALRVMAKLMKEC  482 (513)
T ss_pred             HHHHHHhhcCCEehhhcCCcccCCCCCCC---HH----------HHhcceeecccCCCCCccccc-CHHHHHHHHHHHHh
Confidence            998753          2344432211111   10          11111 122233333333433 35566688999999


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          260 LSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       260 l~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      |..+|..|.|+--+.+.|.++.++
T Consensus       483 W~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  483 WYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             hcCCchhhhHHHHHHHHHHHHhcC
Confidence            999999999999999999998753

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=4.3e-36  Score=259.34  Aligned_cols=190  Identities=24%  Similarity=0.384  Sum_probs=154.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||||+.  +.+.||+|.+.+.                                           
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            3566667899999999999998  7889999998755                                           


Q ss_pred             CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           90 FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        90 ~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      ||..              .....++.+++.||.|||   +.+|+|||+||.|||++.+|.+|+||||+|+....... ..
T Consensus        82 ~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~-vl  157 (808)
T KOG0597|consen   82 YAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS-VL  157 (808)
T ss_pred             hhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCce-ee
Confidence            2221              567789999999999999   99999999999999999999999999999988765322 22


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                        +...|||.|||||+..+.+|+..+|.||+||++||+++|++||+...        +...+........          
T Consensus       158 --tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--------i~~Lv~~I~~d~v----------  217 (808)
T KOG0597|consen  158 --TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--------ITQLVKSILKDPV----------  217 (808)
T ss_pred             --eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--------HHHHHHHHhcCCC----------
Confidence              23789999999999999999999999999999999999999998543        3444444332211          


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           .||  ......+..++...|..||..|.|-.+++.
T Consensus       218 -----~~p--~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  218 -----KPP--STASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             -----CCc--ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence                 111  134445889999999999999999988764

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=4e-35  Score=247.52  Aligned_cols=200  Identities=22%  Similarity=0.334  Sum_probs=149.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc----ceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR----PISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  +|.    .||+|++...                                       
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~   86 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV   86 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence            5677788999999999999987  554    4899988643                                       


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence              00                01456789999999999999   9999999999999999999999999999998765432


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ..... ....+++.|+|||...+..++.++|||||||++||+++ |..||....     ...+...+    ......   
T Consensus       164 ~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~~----~~~~~~---  230 (279)
T cd05109         164 TEYHA-DGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-----AREIPDLL----EKGERL---  230 (279)
T ss_pred             ceeec-CCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH----HCCCcC---
Confidence            22111 11234678999999988889999999999999999998 778775322     11111111    111100   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                  +.....+..+.+++.+||+.||+.||++.++++.|+.+..
T Consensus       231 ------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         231 ------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             ------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                        0011223347899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=6.3e-36  Score=258.30  Aligned_cols=187  Identities=19%  Similarity=0.295  Sum_probs=144.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +++.||+|++...                                           
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5678888999999999999999  7889999988532                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........ 
T Consensus        98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-  173 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF-  173 (329)
T ss_pred             cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc-
Confidence             1111               344568899999999999   99999999999999999999999999999977644322 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                           ...||+.|+|||++.+..++.++|||||||++|+|++|..||....        ......... .+...      
T Consensus       174 -----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~-~~~~~------  233 (329)
T PTZ00263        174 -----TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT--------PFRIYEKIL-AGRLK------  233 (329)
T ss_pred             -----eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC--------HHHHHHHHh-cCCcC------
Confidence                 2568999999999998889999999999999999999999986432        111111111 11100      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                      +          +......+.+|+.+||+.||.+||+     +.+++.
T Consensus       234 ~----------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        234 F----------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             C----------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            0          0011223779999999999999997     577764

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.8e-35  Score=248.85  Aligned_cols=198  Identities=24%  Similarity=0.378  Sum_probs=150.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCC-------cceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQD-------RPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~-------~~vavK~~~~~--------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|...+       ..||+|.+...                                      
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            467778899999999999999822       46999988643                                      


Q ss_pred             ----CCC-------------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC
Q 039895           90 ----FPF-------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN  134 (284)
Q Consensus        90 ----~~~-------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~  134 (284)
                          ++.                               ....+.++.|++.||.|||   +.+++|+||||+||+++.++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence                110                               0234579999999999999   99999999999999999999


Q ss_pred             cceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccH
Q 039895          135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       135 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~  213 (284)
                      .++|+|||++........... .....+++.|+|||.+....++.++|||||||++|||++ |..||....     ....
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~-----~~~~  235 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRV-QSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS-----NQEV  235 (283)
T ss_pred             cEEECCCcceeeccccccccc-cCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHH
Confidence            999999999976644332211 112456888999999988889999999999999999998 988886432     1111


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      ...    +..+...               +.+..++..+.+|+.+||+.+|++||++.||++.|+.+
T Consensus       236 ~~~----i~~~~~~---------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         236 IEM----IRSRQLL---------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHH----HHcCCcC---------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            111    1111111               11223445688999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.7e-35  Score=252.75  Aligned_cols=211  Identities=14%  Similarity=0.214  Sum_probs=145.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|...+.||+|+||.||+|..  +++.||+|++...                                          +
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            6788889999999999999999  7889999998633                                          1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |.               ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........  
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--  159 (303)
T cd07869          85 VHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT--  159 (303)
T ss_pred             CCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc--
Confidence            10               0346678999999999999   999999999999999999999999999998754322211  


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccccc--
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEI--  229 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--  229 (284)
                       .....||+.|+|||++.+. .++.++||||+||++|+|++|..||....    ........+.......   .+...  
T Consensus       160 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (303)
T cd07869         160 -YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK----DIQDQLERIFLVLGTPNEDTWPGVHS  234 (303)
T ss_pred             -CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc----cHHHHHHHHHHHhCCCChhhccchhh
Confidence             1125689999999987654 58899999999999999999999996532    0001111111111000   00000  


Q ss_pred             ---cccc-ccCCCCCCChh---hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 ---VDPA-IVGEEGLMWPE---KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ---~~~~-~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                         ..+. ...........   .......+.+|+.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence               0000 00000000000   0011234779999999999999999999975

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=3.9e-35  Score=244.69  Aligned_cols=192  Identities=21%  Similarity=0.304  Sum_probs=145.4

Q ss_pred             eeeecCCceEEEEEe----CCcceEEEeecCC------------------------------------------C-----
Q 039895           62 VIMKCLFYKLYKGFL----QDRPISVMKFEDT------------------------------------------F-----   90 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~------------------------------------------~-----   90 (284)
                      .||+|+||.||+|.+    ++..+|+|++...                                          +     
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            589999999999976    5788999988543                                          0     


Q ss_pred             ----------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           91 ----------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        91 ----------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                                ........++.|++.||.|||   +++|+|+||||+||+++.++.++|+|||++................
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG  158 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence                      011466789999999999999   9999999999999999999999999999998765443322222223


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      .+++.|+|||.+....++.++|||||||++||+++ |..||....     .......+    ..+....           
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~i----~~~~~~~-----------  218 (257)
T cd05116         159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK-----GNEVTQMI----ESGERME-----------  218 (257)
T ss_pred             CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH----HCCCCCC-----------
Confidence            44678999999988889999999999999999998 888886432     11111111    1111110           


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                          .+...+..+.+++.+||+.||++||++.+|+..|++.
T Consensus       219 ----~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         219 ----CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             ----CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence                0112334578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-36  Score=278.21  Aligned_cols=200  Identities=24%  Similarity=0.350  Sum_probs=155.5

Q ss_pred             CCCCCeeeecCCceEEEEEe---CCc----ceEEEeecCC-----------------------------CCCc-------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL---QDR----PISVMKFEDT-----------------------------FPFS-------   93 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~---~~~----~vavK~~~~~-----------------------------~~~~-------   93 (284)
                      ....+.||+|.||.||+|.+   .|.    .||+|.+...                             .|..       
T Consensus       694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~  773 (1025)
T KOG1095|consen  694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL  773 (1025)
T ss_pred             eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence            34467899999999999999   443    3899988765                             0100       


Q ss_pred             ----------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           94 ----------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        94 ----------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                                                  ...+.++.|||+|+.||+   +++.|||||..+|+|++....+||+|||+|+
T Consensus       774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhH
Confidence                                        677899999999999999   9999999999999999999999999999999


Q ss_pred             ccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      .+....++..... ..-+..|||||.+..+.|+.|+|||||||++||++|...++++..    .   ..+........+ 
T Consensus       851 Diy~~~yyr~~~~-a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~----~---n~~v~~~~~~gg-  921 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGE-AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR----S---NFEVLLDVLEGG-  921 (1025)
T ss_pred             hhhhchheeccCc-cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc----c---hHHHHHHHHhCC-
Confidence            7666555544332 234578999999999999999999999999999999544443322    1   111122122222 


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                     +.+.+..|+..+.++|..||+.+|++||++..+++++..+...
T Consensus       922 ---------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  922 ---------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             ---------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence                           1233556777789999999999999999999999999988754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.2e-35  Score=255.90  Aligned_cols=184  Identities=20%  Similarity=0.259  Sum_probs=140.7

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CCCc-
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FPFS-   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~~~-   93 (284)
                      +.||+|+||.||++..  +|+.||+|++...                                            +|.. 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4799999999999998  7899999988643                                            1111 


Q ss_pred             --------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           94 --------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        94 --------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                    .....++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++.......   ....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~---~~~~  154 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKT  154 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC---cccc
Confidence                          345668899999999999   99999999999999999999999999999875422211   1122


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      ..||+.|+|||++.+..++.++|||||||++|||++|..||....        ......... ....      .+     
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~~~-~~~~------~~-----  214 (323)
T cd05571         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELIL-MEEI------RF-----  214 (323)
T ss_pred             eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC--------HHHHHHHHH-cCCC------CC-----
Confidence            579999999999998899999999999999999999999996432        111111111 1110      00     


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                           +......+.+++.+||+.||++||     ++.++++
T Consensus       215 -----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         215 -----PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             -----CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence                 111233478999999999999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=4.2e-35  Score=255.81  Aligned_cols=145  Identities=20%  Similarity=0.262  Sum_probs=122.3

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------C--------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------F--------   90 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------~--------   90 (284)
                      ...++|...+.||+|+||.||++..  .++.||+|++...                               +        
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3557898899999999999999998  7889999988643                               0        


Q ss_pred             ----------C------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           91 ----------P------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        91 ----------~------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                                |            .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus        94 ~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874          94 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             cceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence                      0            00334568999999999999   9999999999999999999999999999997654


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      .....    ....||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       171 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  221 (355)
T cd07874         171 TSFMM----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR  221 (355)
T ss_pred             Ccccc----CCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            33221    1256899999999999888999999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3e-35  Score=251.38  Aligned_cols=162  Identities=23%  Similarity=0.317  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      .+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+........ .....++..|+|||++...
T Consensus       140 ~~~i~~~i~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  215 (304)
T cd05096         140 LLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRI-QGRAVLPIRWMAWECILMG  215 (304)
T ss_pred             HHHHHHHHHHHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEe-cCcCCCCccccCHHHHhcC
Confidence            4579999999999999   99999999999999999999999999999977644332211 1124567889999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHhC--CCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLTG--KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT  253 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~elltg--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (284)
                      .++.++|||||||++|||+++  ..||....     .......+......... ... .          ..+..++..+.
T Consensus       216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~-~~~-~----------~~~~~~~~~~~  278 (304)
T cd05096         216 KFTTASDVWAFGVTLWEILMLCKEQPYGELT-----DEQVIENAGEFFRDQGR-QVY-L----------FRPPPCPQGLY  278 (304)
T ss_pred             CCCchhhhHHHHHHHHHHHHccCCCCCCcCC-----HHHHHHHHHHHhhhccc-ccc-c----------cCCCCCCHHHH
Confidence            899999999999999999874  44554321     11122222111111100 000 0          00112234588


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          254 ELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       254 ~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      +|+.+||+.+|++|||+.+|.+.|+
T Consensus       279 ~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         279 ELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHccCCchhCcCHHHHHHHHh
Confidence            9999999999999999999998886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=8.4e-35  Score=243.82  Aligned_cols=200  Identities=26%  Similarity=0.375  Sum_probs=153.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  ++..||+|.+...                                           
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            5788889999999999999998  8899999976432                                           


Q ss_pred             -CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                       ++                   .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence             00                   01345678999999999999   99999999999999999999999999999877654


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .....   ....|++.|+|||.+.+..++.++||||||+++||+++|..||....      .......... .....+..
T Consensus       159 ~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~------~~~~~~~~~~-~~~~~~~~  228 (267)
T cd08228         159 KTTAA---HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLFSLCQKI-EQCDYPPL  228 (267)
T ss_pred             hhHHH---hcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc------ccHHHHHHHH-hcCCCCCC
Confidence            32211   12468889999999988889999999999999999999999986432      1112222111 11111110


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                                    ........+.+++.+||+.+|++|||+.+|++.|+.+.
T Consensus       229 --------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         229 --------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             --------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence                          01123345889999999999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.8e-35  Score=246.06  Aligned_cols=197  Identities=19%  Similarity=0.316  Sum_probs=148.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+     .+..||+|.+...                                        
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            4677888999999999999986     3568999988754                                        


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.|++.||+|||   +.+++||||||+|||++.++.++++|||.+.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence              11                01456789999999999999   9999999999999999999999999999876543222


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ...  .....++..|+|||++.+..++.++|||||||++||+++ |..||....        ........ ..+..    
T Consensus       162 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--------~~~~~~~~-~~~~~----  226 (266)
T cd05064         162 IYT--TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--------GQDVIKAV-EDGFR----  226 (266)
T ss_pred             hhc--ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHH-HCCCC----
Confidence            111  111345678999999988899999999999999999775 988886432        11111111 11100    


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                                 .+.+..++..+.+++..||+.+|++|||+.+|++.|+++
T Consensus       227 -----------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         227 -----------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             -----------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                       011223344578999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=6.1e-35  Score=250.84  Aligned_cols=141  Identities=23%  Similarity=0.375  Sum_probs=113.7

Q ss_pred             CCeeeecCCceEEEEEe----CCcceEEEeecCC-----------------------------------------CC---
Q 039895           60 GKVIMKCLFYKLYKGFL----QDRPISVMKFEDT-----------------------------------------FP---   91 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-----------------------------------------~~---   91 (284)
                      +.+||+|+||+||+|..    ++..||+|.+...                                         ++   
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~   85 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHD   85 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCC
Confidence            46899999999999986    4578999988643                                         00   


Q ss_pred             --------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE----ecCCcceeecccccccc
Q 039895           92 --------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL----QEENVAQLFDFTLSLSI  147 (284)
Q Consensus        92 --------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~Dfg~a~~~  147 (284)
                                          .......++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|||+++..
T Consensus        86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence                                00224578999999999999   9999999999999999    45678999999999876


Q ss_pred             CCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ..............||+.|+|||++.+. .++.++||||+||++|+|++|.+||...
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            5433222222336789999999998764 5889999999999999999999998643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=3.7e-35  Score=245.61  Aligned_cols=197  Identities=23%  Similarity=0.334  Sum_probs=150.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC-
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP-   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~-   91 (284)
                      .+|...+.||+|+||.||+|.+  .+..||+|++...                                        ++ 
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            3567778999999999999998  6889999998654                                        00 


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      ....++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++...........
T Consensus        86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence                            00445778999999999999   99999999999999999999999999999877654332211


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      .  ...++..|+|||.+.+..++.++|||||||++|||++ |..|+....        ........ ... ..    +  
T Consensus       163 ~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--------~~~~~~~~-~~~-~~----~--  224 (263)
T cd05052         163 A--GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELL-EKG-YR----M--  224 (263)
T ss_pred             C--CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHH-HCC-CC----C--
Confidence            1  1234678999999988899999999999999999998 888875422        11111111 111 00    0  


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                              +.+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       225 --------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         225 --------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             --------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence                    00112234588999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=2.7e-35  Score=258.57  Aligned_cols=158  Identities=21%  Similarity=0.325  Sum_probs=117.5

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      .+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......... .....++..|+|||++.+.
T Consensus       216 ~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  291 (375)
T cd05104         216 LLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV-KGNARLPVKWMAPESIFNC  291 (375)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc-cCCCCCCcceeChhHhcCC
Confidence            3468899999999999   99999999999999999999999999999987654332211 1113456789999999988


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++|||||||++|||++ |..||.....    .......+    ..+....  .             +...+.++.+
T Consensus       292 ~~~~~sDi~slG~~l~ellt~g~~p~~~~~~----~~~~~~~~----~~~~~~~--~-------------~~~~~~~l~~  348 (375)
T cd05104         292 VYTFESDVWSYGILLWEIFSLGSSPYPGMPV----DSKFYKMI----KEGYRML--S-------------PECAPSEMYD  348 (375)
T ss_pred             CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc----hHHHHHHH----HhCccCC--C-------------CCCCCHHHHH
Confidence            99999999999999999998 7777754220    01111111    1110000  0             0111234789


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      |+.+||+.||++|||+.||++.|++.
T Consensus       349 li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         349 IMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHhh
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.6e-35  Score=258.61  Aligned_cols=211  Identities=18%  Similarity=0.219  Sum_probs=146.5

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|+..+.||+|+||.||++..  +|+.||+|++...                                            
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            578889999999999999997  7899999987532                                            


Q ss_pred             ----CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ----FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ----~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                          ++              .......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~  157 (372)
T cd07853          81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE  157 (372)
T ss_pred             EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence                00              00345678999999999999   9999999999999999999999999999997654332


Q ss_pred             ccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc--
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE--  228 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  228 (284)
                      ....  ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.....     ......+...........  
T Consensus       158 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~g~~~~~~~~  230 (372)
T cd07853         158 SKHM--TQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP-----IQQLDLITDLLGTPSLEAMR  230 (372)
T ss_pred             cccC--CCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHHHcCCCCHHHHH
Confidence            2211  124678999999998764 478999999999999999999999865331     111111111110000000  


Q ss_pred             --------cccccc--cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          229 --------IVDPAI--VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       229 --------~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                              .+....  .......+.........+.+|+.+||+.||++|||+.|+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                    000000  000000000011123457899999999999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.6e-35  Score=255.90  Aligned_cols=144  Identities=20%  Similarity=0.244  Sum_probs=121.4

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..+.|...+.||+|+||.||++..  .|..||+|++...                                         
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            457888899999999999999998  7899999998532                                         


Q ss_pred             --------CC------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 --------FP------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 --------~~------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                              ++            .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus        99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~  175 (359)
T cd07876          99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT  175 (359)
T ss_pred             ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence                    00            00334568999999999999   99999999999999999999999999999876533


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ....    ....||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       176 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~  225 (359)
T cd07876         176 NFMM----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT  225 (359)
T ss_pred             CccC----CCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence            2211    1256899999999999889999999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=5.2e-35  Score=256.01  Aligned_cols=144  Identities=19%  Similarity=0.270  Sum_probs=122.1

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF----------------------------------------   90 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----------------------------------------   90 (284)
                      ..++|...+.||+|+||.||++..  .++.||||++....                                        
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            457899899999999999999998  78899999986420                                        


Q ss_pred             ---------C------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           91 ---------P------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        91 ---------~------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                               +            .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus       102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  178 (364)
T cd07875         102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  178 (364)
T ss_pred             CeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence                     0            00345568999999999999   99999999999999999999999999999976543


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ....    ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus       179 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  228 (364)
T cd07875         179 SFMM----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT  228 (364)
T ss_pred             CCcc----cCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence            3221    1256899999999999989999999999999999999999999653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1e-34  Score=245.20  Aligned_cols=200  Identities=20%  Similarity=0.337  Sum_probs=148.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc----ceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR----PISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  ++.    .+++|.+...                                       
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            4567778999999999999998  555    4777777432                                       


Q ss_pred             --CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++.                ....+.++.||+.||.|||   +.+++|+||||+|||++.++.+||+|||+++......
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence              000                0356779999999999999   9999999999999999999999999999998664332


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ... ......++..|+|||.+.+..++.++|||||||++||+++ |..||....     .....+.+    ..+....  
T Consensus       164 ~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~~----~~~~~~~--  231 (279)
T cd05111         164 KKY-FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR-----PHEVPDLL----EKGERLA--  231 (279)
T ss_pred             ccc-ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH----HCCCcCC--
Confidence            211 1112456788999999988889999999999999999998 888875432     11111111    1111100  


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .+             ..+...+.+++.+||..+|+.|||+.|+++.|..+.+
T Consensus       232 ~~-------------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         232 QP-------------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             CC-------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            00             1122346789999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-36  Score=234.51  Aligned_cols=205  Identities=19%  Similarity=0.222  Sum_probs=154.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|||+-||.++.  +++.+|+|++...                                          
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            35688889999999999999997  8999999988644                                          


Q ss_pred             -----------------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 -----------------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 -----------------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                                             +-++.+.+.|+.+|++||.+||+. ..+.+||||||.|||+.+.+.+++.|||.+..
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence                                   222267889999999999999943 33499999999999999999999999999876


Q ss_pred             cCCCCcc------ccCCCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          147 IPEGETH------INDSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       147 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      ..-....      .........|..|+|||.+.-   ...+.++|||||||++|+|+.|..||..... .          
T Consensus       179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-~----------  247 (302)
T KOG2345|consen  179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-Q----------  247 (302)
T ss_pred             cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-c----------
Confidence            6421111      111112457899999998864   3578999999999999999999999964321 1          


Q ss_pred             HHHhhcCcccc-cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          218 KKYIENESFKE-IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                           .+.+.- +....+      .+|.....+..+.+++.+|++.||.+||++.+++..++++.
T Consensus       248 -----GgSlaLAv~n~q~------s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  248 -----GGSLALAVQNAQI------SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             -----CCeEEEeeecccc------ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence                 111111 111111      12222234556889999999999999999999999998874

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.7e-35  Score=260.39  Aligned_cols=139  Identities=22%  Similarity=0.300  Sum_probs=119.6

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CCCc-
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FPFS-   93 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~~~-   93 (284)
                      |...++||+|+||.|-+|.+  ++..||||+++..                                        .|.- 
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVf  267 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVF  267 (586)
T ss_pred             EEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeee
Confidence            45567899999999999999  8999999999877                                        1110 


Q ss_pred             ---------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC--cceeeccccccccCCC
Q 039895           94 ---------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN--VAQLFDFTLSLSIPEG  150 (284)
Q Consensus        94 ---------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~--~~kl~Dfg~a~~~~~~  150 (284)
                                           .....++.||+.||.+||   ..+|||+||||+||||...+  .+||+|||.|......
T Consensus       268 ELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~  344 (586)
T KOG0667|consen  268 ELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR  344 (586)
T ss_pred             hhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence                                 456679999999999999   99999999999999997543  7899999999887665


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                      ...      ..-+..|+|||++.+.+|+.+.||||||||+.||++|.+.|.+..
T Consensus       345 vyt------YiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n  392 (586)
T KOG0667|consen  345 VYT------YIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN  392 (586)
T ss_pred             cee------eeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence            442      567889999999999999999999999999999999988776543

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-35  Score=256.76  Aligned_cols=196  Identities=19%  Similarity=0.220  Sum_probs=147.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +++.||+|++...                                           
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            3677888999999999999999  6889999998632                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++......   
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~---  154 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY---  154 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCcccccc---
Confidence             111               1455678999999999999   999999999999999999999999999999765441   


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .....||+.|+|||++.+..++.++|||||||++|||++|..||....     .......+.........+...++ 
T Consensus       155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~-  225 (333)
T cd05600         155 ---ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST-----PNETWENLKYWKETLQRPVYDDP-  225 (333)
T ss_pred             ---cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC-----HHHHHHHHHhccccccCCCCCcc-
Confidence               122578999999999998899999999999999999999999986432     11111111110000000000000 


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                 .......+.+++.+||..+|++||++.++++.
T Consensus       226 -----------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         226 -----------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             -----------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence                       01233457899999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=5.2e-35  Score=255.00  Aligned_cols=195  Identities=21%  Similarity=0.247  Sum_probs=143.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      .+|+..+.||+|+||.||+|.+  +++.||||++...                                          +
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            3455567899999999999998  7899999998543                                          1


Q ss_pred             CC-----------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           91 PF-----------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        91 ~~-----------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                      |.           +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..+......   ...
T Consensus       154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~---~~~  227 (353)
T PLN00034        154 MDGGSLEGTHIADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP---CNS  227 (353)
T ss_pred             CCCCcccccccCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc---ccc
Confidence            11           1345679999999999999   999999999999999999999999999999876433211   112


Q ss_pred             cccCccccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          160 VIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~-----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      ..||..|+|||++..     ...+.++|||||||++|||++|+.||....     ...+........... ..       
T Consensus       228 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~-~~-------  294 (353)
T PLN00034        228 SVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR-----QGDWASLMCAICMSQ-PP-------  294 (353)
T ss_pred             cccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CccHHHHHHHHhccC-CC-------
Confidence            578999999998743     234568999999999999999999986322     111111111111000 00       


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                              .........+.+|+.+||+.||++|||+.|+++.
T Consensus       295 --------~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        295 --------EAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             --------CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                    0011223448899999999999999999999864

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=6.3e-35  Score=247.29  Aligned_cols=208  Identities=15%  Similarity=0.168  Sum_probs=145.8

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||+||+|..  +++.||+|.+...                                             
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            66778999999999999998  7889999987532                                             


Q ss_pred             ------CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 ------FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 ------~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                            ++                .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        82 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          82 VTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             EEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence                  00                00345678999999999999   999999999999999999999999999998766


Q ss_pred             CCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh--cCc
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE--NES  225 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~  225 (284)
                      ......    ....||+.|+|||++.+..++.++||||+||++|+|++|.+||....    ....+.........  ...
T Consensus       159 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~----~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07863         159 SCQMAL----TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS----EADQLGKIFDLIGLPPEDD  230 (288)
T ss_pred             cCcccC----CCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC----HHHHHHHHHHHhCCCChhh
Confidence            432221    12568999999999988889999999999999999999999885432    11111111111000  000


Q ss_pred             cccccc---ccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVD---PAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +.....   ........... .........+.+++.+||+.||++|||+.|++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            100000   00000000000 001123345789999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4e-35  Score=252.80  Aligned_cols=184  Identities=21%  Similarity=0.279  Sum_probs=139.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|...+.||+|+||.||+|..  +++.||+|++...                                            
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            467788999999999999998  6678999988632                                            


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........ 
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-  156 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK-  156 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC-
Confidence             1111               455678999999999999   99999999999999999999999999999865322111 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                        ......||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ...      .
T Consensus       157 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~~-~~~------~  219 (324)
T cd05587         157 --TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--------EDELFQSIME-HNV------S  219 (324)
T ss_pred             --ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHc-CCC------C
Confidence              1112568999999999999999999999999999999999999986432        1111111111 100      0


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                      +          +......+.+++.+||+.+|++|++.
T Consensus       220 ~----------~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         220 Y----------PKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             C----------CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            0          01122347799999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-35  Score=231.69  Aligned_cols=190  Identities=21%  Similarity=0.270  Sum_probs=151.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|+.++.||+|.||.||.|..  ++..||+|++.+.                                          
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            37899999999999999999999  7889999998765                                          


Q ss_pred             -------------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 -------------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -------------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                                         .-.+.....+..|+|.||.|+|   .++|+||||||+|+|++..+.+||+|||.+...+.+
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~  177 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN  177 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence                               0111445578999999999999   999999999999999999999999999998776532


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .     ..+.+||..|.|||+..+..++..+|+|++|++.||++.|.+||.+..  .   ...   .+....    .++.
T Consensus       178 k-----R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~---~et---YkrI~k----~~~~  240 (281)
T KOG0580|consen  178 K-----RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--H---SET---YKRIRK----VDLK  240 (281)
T ss_pred             C-----ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--h---HHH---HHHHHH----cccc
Confidence            2     233789999999999999999999999999999999999999997543  1   111   111111    0111


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      +|             ......+.+++.+|+..+|.+|.+..|++..
T Consensus       241 ~p-------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  241 FP-------------STISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             CC-------------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            11             1222337899999999999999999999864

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.1e-34  Score=243.85  Aligned_cols=157  Identities=24%  Similarity=0.316  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      ...++.|++.||+|||   +.+|+||||||+|||++.++.++|+|||+++.......... .....+++.|+|||...+.
T Consensus       114 ~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~  189 (272)
T cd05075         114 LVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQ-GRIAKMPVKWIAIESLADR  189 (272)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccCcccceec-CCcccCCcccCCHHHccCC
Confidence            5678999999999999   89999999999999999999999999999987654332211 1123467789999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++|||||||++||+++ |..||....     ...+..    ....+....               .....+..+.+
T Consensus       190 ~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~----~~~~~~~~~---------------~~~~~~~~~~~  245 (272)
T cd05075         190 VYTTKSDVWSFGVTMWEIATRGQTPYPGVE-----NSEIYD----YLRQGNRLK---------------QPPDCLDGLYS  245 (272)
T ss_pred             CcChHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH----HHHcCCCCC---------------CCCCCCHHHHH
Confidence            89999999999999999999 677775321     111111    111111100               01122334789


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      ++.+||+.+|++|||+.++++.|+++
T Consensus       246 li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         246 LMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.9e-35  Score=252.78  Aligned_cols=184  Identities=21%  Similarity=0.273  Sum_probs=141.3

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|...+.||+|+||.||+|..  ++..||+|++...                                            
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            477788999999999999998  6789999987643                                            


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++........
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence             111               0456779999999999999   999999999999999999999999999998754322211


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .....||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ....  +   
T Consensus       158 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~--------~~~~~~~i~~-~~~~--~---  220 (323)
T cd05616         158 ---TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIME-HNVA--Y---  220 (323)
T ss_pred             ---cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CCCC--C---
Confidence               122578999999999999999999999999999999999999986432        1111111111 1100  0   


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                                 +......+.+++.+||+.+|++|++.
T Consensus       221 -----------p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         221 -----------PKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             -----------CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence                       01122347899999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=6.3e-35  Score=250.73  Aligned_cols=183  Identities=21%  Similarity=0.315  Sum_probs=138.5

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      +.||+|+||.||+|..  ++..||+|++...                                             +|..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999998  6788999988532                                             1110


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++........   ...
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~---~~~  154 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG---KAS  154 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC---ccc
Confidence                           445668999999999999   99999999999999999999999999999876533221   112


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        ............       +.+    
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~-------~~~----  215 (316)
T cd05592         155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED--------EDELFDSILNDR-------PHF----  215 (316)
T ss_pred             cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC-------CCC----
Confidence            2578999999999998899999999999999999999999986432        111111111100       000    


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHH-HHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIV-QVA  274 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-ev~  274 (284)
                            +......+.+++.+||+.+|++||++. +++
T Consensus       216 ------~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         216 ------PRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             ------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence                  111223467899999999999999875 453

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=4.8e-35  Score=252.76  Aligned_cols=188  Identities=19%  Similarity=0.272  Sum_probs=139.0

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      +.||+|+||.||++..  +++.||+|++...                                             +|..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4799999999999998  7789999998643                                             1110


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++........   ..
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~---~~  154 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TS  154 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc---cc
Confidence                           455678999999999999   999999999999999999999999999998754222111   12


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||...............++..........  +        
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~--------  224 (329)
T cd05618         155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--I--------  224 (329)
T ss_pred             cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC--C--------
Confidence            257899999999999989999999999999999999999999643211111112222222211111100  0        


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                            +......+.+++.+||+.||++|||+
T Consensus       225 ------p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         225 ------PRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             ------CCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence                  11122347799999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1.5e-34  Score=282.02  Aligned_cols=222  Identities=26%  Similarity=0.395  Sum_probs=170.7

Q ss_pred             eecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------
Q 039895           44 SFSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------   89 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------   89 (284)
                      .++++++.   ..|...+.||+|+||.||+|..  +|..||||++...                                
T Consensus       682 ~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~  758 (968)
T PLN00113        682 SITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGA  758 (968)
T ss_pred             hhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence            34555554   4577788999999999999997  7899999988543                                


Q ss_pred             -----CCC------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -----FPF------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -----~~~------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                           |+.            ...+..++.|++.||+|||+.++.+|+||||||+||+++.++.+++. ||.+......  
T Consensus       759 ~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--  835 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--  835 (968)
T ss_pred             EEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence                 111            14567899999999999997777899999999999999998888876 6654332211  


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                           ....||+.|+|||++.+..++.++|||||||++|||+||+.||+...   ........|............++|+
T Consensus       836 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  907 (968)
T PLN00113        836 -----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF---GVHGSIVEWARYCYSDCHLDMWIDP  907 (968)
T ss_pred             -----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc---CCCCcHHHHHHHhcCccchhheeCc
Confidence                 11467899999999999899999999999999999999999985432   2234455666555444445556666


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .+...    .+....+...+.+++.+||+.+|++||||.||++.|+++..+
T Consensus       908 ~~~~~----~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        908 SIRGD----VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS  954 (968)
T ss_pred             cccCC----CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence            55432    122345566788999999999999999999999999998753

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=4.6e-35  Score=244.69  Aligned_cols=197  Identities=21%  Similarity=0.338  Sum_probs=149.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CCCc
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FPFS   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~~~   93 (284)
                      ++|...++||+|+||.||+|.. ++..||+|.+...                                        ++..
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   85 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK   85 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence            5677788999999999999998 6778999987643                                        1110


Q ss_pred             -----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           94 -----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        94 -----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                       ..++.++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||++........... 
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~-  161 (261)
T cd05072          86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-  161 (261)
T ss_pred             CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc-
Confidence                             345678999999999999   89999999999999999999999999999987654332211 


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                       ....++..|+|||++....++.++|||||||++|+|++ |..||....     .......+    .... .        
T Consensus       162 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-----~~~~~~~~----~~~~-~--------  222 (261)
T cd05072         162 -EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS-----NSDVMSAL----QRGY-R--------  222 (261)
T ss_pred             -CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC-----HHHHHHHH----HcCC-C--------
Confidence             11346778999999988889999999999999999998 888875322     11111111    1110 0        


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                            .+.....+..+.+++.+||+.+|++|||++++.+.|+++
T Consensus       223 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         223 ------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             ------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence                  000112233478999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=3.3e-35  Score=254.18  Aligned_cols=194  Identities=23%  Similarity=0.234  Sum_probs=142.6

Q ss_pred             CCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC-----------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~-----------------------------------------   89 (284)
                      +|...+.||+|+||.||++..     ++..||+|++...                                         
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            467778999999999999876     5788999998532                                         


Q ss_pred             -----CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence                 1111               445678899999999999   99999999999999999999999999999876543


Q ss_pred             CCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ......  ....||+.|+|||++.+. .++.++|||||||++|||++|..||.....  .  ............ .    
T Consensus       158 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~--~~~~~~~~~~~~-~----  226 (332)
T cd05614         158 EEKERT--YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE--R--NTQSEVSRRILK-C----  226 (332)
T ss_pred             cCCCcc--ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC--C--CCHHHHHHHHhc-C----
Confidence            322111  125789999999998765 478899999999999999999999864321  1  111111111111 0    


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                        ++.+          +......+.+++.+||+.||++||     ++.++++
T Consensus       227 --~~~~----------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         227 --DPPF----------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             --CCCC----------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence              0000          111223478999999999999999     6777764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.2e-34  Score=245.16  Aligned_cols=209  Identities=22%  Similarity=0.270  Sum_probs=149.8

Q ss_pred             CCCCeeeecCCceEEEEEe------CCcceEEEeecCC------------------------------------------
Q 039895           58 DGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~------------------------------------------   89 (284)
                      ...+.||+|+||+||.+.+      ++..||+|.+...                                          
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            6678999999999988653      5678999998643                                          


Q ss_pred             --CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 --FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 --~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                        ++              ....+..++.|++.||.|||   +.+|+|+||||+|||++.++.++|+|||++.........
T Consensus        87 ~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  163 (283)
T cd05080          87 MEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  163 (283)
T ss_pred             ecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence              00              01556789999999999999   999999999999999999999999999999876543322


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh---hcCcccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI---ENESFKEIV  230 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  230 (284)
                      ........++..|+|||.+....++.++||||||+++|||++|..|+.....      ..........   ....+.+..
T Consensus       164 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05080         164 YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK------KFEEMIGPKQGQMTVVRLIELL  237 (283)
T ss_pred             hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc------hhhhhhcccccccchhhhhhhh
Confidence            1111123456779999999888899999999999999999999998753220      0000000000   000011111


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      +...      ..+.+...+..+.+++..||+.+|++|||+++|++.|+++.
T Consensus       238 ~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         238 ERGM------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hcCC------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            1110      01112233456889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=2e-34  Score=247.51  Aligned_cols=141  Identities=22%  Similarity=0.371  Sum_probs=113.5

Q ss_pred             CCeeeecCCceEEEEEe----CCcceEEEeecCC-----------------------------------------CCC--
Q 039895           60 GKVIMKCLFYKLYKGFL----QDRPISVMKFEDT-----------------------------------------FPF--   92 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-----------------------------------------~~~--   92 (284)
                      +.+||+|+||.||+|..    ++..||+|.+...                                         ++.  
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~   85 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHD   85 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCc
Confidence            46899999999999997    3468999987643                                         000  


Q ss_pred             ---------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE----ecCCcceeecccccccc
Q 039895           93 ---------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL----QEENVAQLFDFTLSLSI  147 (284)
Q Consensus        93 ---------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~Dfg~a~~~  147 (284)
                                           ......++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|||+++..
T Consensus        86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07867          86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence                                 0235578999999999999   9999999999999999    56678999999999876


Q ss_pred             CCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ..............||+.|+|||++.+. .++.++|||||||++|||+||..||...
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            5443322222335789999999998764 5889999999999999999999998643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.3e-34  Score=258.72  Aligned_cols=218  Identities=15%  Similarity=0.143  Sum_probs=149.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------C-------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------F-------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------~-------   90 (284)
                      .+|...+.||+|+||.||++..  .++.||||.....                                   +       
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~  248 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLYT  248 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccCCCHHH
Confidence            4688888999999999999999  6788999964321                                   0       


Q ss_pred             --------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCccc
Q 039895           91 --------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG  162 (284)
Q Consensus        91 --------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g  162 (284)
                              .....++.++.||+.||.|||   +.+|+||||||+|||++.++.++|+|||+++........ .......|
T Consensus       249 ~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~~G  324 (461)
T PHA03211        249 YLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST-PFHYGIAG  324 (461)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc-ccccccCC
Confidence                    111456789999999999999   999999999999999999999999999999766432211 11122569


Q ss_pred             CccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc---cHHHHHHHHhh-cCcccccccccc----
Q 039895          163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY---RLQDLVKKYIE-NESFKEIVDPAI----  234 (284)
Q Consensus       163 t~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~----  234 (284)
                      |+.|+|||++.+..++.++|||||||++|||++|..+++..........   .+...+..... ...+.......+    
T Consensus       325 T~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~  404 (461)
T PHA03211        325 TVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQY  404 (461)
T ss_pred             CcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHH
Confidence            9999999999998999999999999999999999877654331111111   11111111100 000110000000    


Q ss_pred             ---------cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          235 ---------VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       235 ---------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                               .......|.........+.+|+.+||+.||.+|||+.|+++.
T Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        405 RHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                     000000111111222357899999999999999999999864

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=6.7e-36  Score=261.95  Aligned_cols=198  Identities=20%  Similarity=0.289  Sum_probs=147.8

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||++..  ++..||+|++...                                         
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            456788889999999999999998  7889999988531                                         


Q ss_pred             ---CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 ---FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ---~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                         +|..              .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........
T Consensus       121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence               1211              345568899999999999   99999999999999999999999999999977643322


Q ss_pred             cccCCCCcccCccccccccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTG----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ...  ....||+.|+|||++.+.    .++.++|||||||++|||++|..||....        ..............  
T Consensus       198 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~~~--  265 (370)
T cd05596         198 VRC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIMDHKNS--  265 (370)
T ss_pred             ccC--CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC--------HHHHHHHHHcCCCc--
Confidence            111  225799999999988653    37899999999999999999999997533        11111111111000  


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD--RPTIVQVAKQ  276 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~ev~~~  276 (284)
                                 ..++.....+..+.+++.+||+.+|.+  |||+.|+++.
T Consensus       266 -----------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         266 -----------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             -----------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence                       001111123345789999999999988  9999999754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=8.1e-35  Score=251.39  Aligned_cols=193  Identities=19%  Similarity=0.274  Sum_probs=142.0

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      +.||+|+||.||++..  ++..||+|++...                                             +|..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4799999999999998  7889999998642                                             1111


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     ..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......   ...
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~---~~~  154 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD---TTS  154 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC---ccc
Confidence                           456678999999999999   99999999999999999999999999999865322111   112


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||...............+...........      +    
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----  224 (329)
T cd05588         155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR------I----  224 (329)
T ss_pred             cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC------C----
Confidence            257899999999999989999999999999999999999999643321211111222222222111110      0    


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCC------HHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPT------IVQVAK  275 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps------~~ev~~  275 (284)
                            +......+.+++.+||+.||.+|||      +.++++
T Consensus       225 ------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         225 ------PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             ------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence                  0112234789999999999999998      566653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=6.9e-35  Score=251.70  Aligned_cols=185  Identities=19%  Similarity=0.259  Sum_probs=141.2

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CCC--
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FPF--   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~~--   92 (284)
                      +.||+|+||.||++..  +|+.||+|++...                                            +|.  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999998  7899999998643                                            111  


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                   +.....++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++........   ...
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~---~~~  154 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT---MKT  154 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc---ccc
Confidence                         1456678999999999999   999999999999999999999999999998754322111   122


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..||....        ......... ....      .+     
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~--------~~~~~~~~~-~~~~------~~-----  214 (328)
T cd05593         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELIL-MEDI------KF-----  214 (328)
T ss_pred             ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC--------HHHHHHHhc-cCCc------cC-----
Confidence            568999999999998889999999999999999999999986432        111111111 0000      00     


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAKQ  276 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~~  276 (284)
                           +......+.+++.+||+.||++||     ++.++++.
T Consensus       215 -----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         215 -----PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             -----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence                 111223478999999999999997     88888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.3e-35  Score=254.00  Aligned_cols=210  Identities=14%  Similarity=0.225  Sum_probs=147.4

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------C---------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------F---------   90 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------~---------   90 (284)
                      ...+.|...+.||+|+||.||+|..  ++..||||++...                              .         
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            3457788889999999999999998  7789999998642                              0         


Q ss_pred             -----------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           91 -----------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        91 -----------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                                             ........++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        92 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          92 FNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             cCcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence                                   001445678999999999999   999999999999999999999999999999776


Q ss_pred             CCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ....      ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.....     ......+...... ..
T Consensus       169 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~-~~  236 (343)
T cd07878         169 DDEM------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-----IDQLKRIMEVVGT-PS  236 (343)
T ss_pred             CCCc------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHhCC-CC
Confidence            4322      12578999999999876 4688999999999999999999999864321     0000000000000 00


Q ss_pred             ccccc-----------ccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          227 KEIVD-----------PAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       227 ~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .+...           ..+.......+. ......+.+.+|+.+||+.||++|||+.|+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000           000000000000 000112346799999999999999999999853

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.5e-34  Score=249.89  Aligned_cols=140  Identities=24%  Similarity=0.286  Sum_probs=119.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|+..+.||+|+||.||++..  +|..+|+|++...                                          +
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            6788889999999999999999  6888999987643                                          1


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      |..               .....++.|++.||.|||   +. +|+||||||+|||++.++.++|+|||++........  
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--  159 (331)
T cd06649          85 MDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--  159 (331)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccccccc--
Confidence            111               345678999999999999   64 699999999999999999999999999876643221  


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~  202 (284)
                         ....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       160 ---~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         160 ---NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             ---ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence               125689999999999988999999999999999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-34  Score=242.15  Aligned_cols=196  Identities=22%  Similarity=0.312  Sum_probs=146.5

Q ss_pred             CCCCCeeeecCCceEEEEEe--C---CcceEEEeecCCC------------------------------C----------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--Q---DRPISVMKFEDTF------------------------------P----------   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~~------------------------------~----------   91 (284)
                      |...+.||+|+||.||+|..  +   +..||+|++....                              +          
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678999999999999997  2   2679999886430                              0          


Q ss_pred             ------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           92 ------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        92 ------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                                                    .......++.|++.||.|||   +.+++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence                                          00234568999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHH
Q 039895          142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      |+++.......... .....++..|+|||++....++.++|||||||++||+++ |..||....     ....   ....
T Consensus       158 g~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~-----~~~~---~~~~  228 (273)
T cd05035         158 GLSKKIYSGDYYRQ-GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE-----NHEI---YDYL  228 (273)
T ss_pred             cceeeccccccccc-cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-----HHHH---HHHH
Confidence            99987654432211 111235678999999988889999999999999999999 777775322     1111   1111


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                       ..+....               .+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus       229 -~~~~~~~---------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         229 -RHGNRLK---------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             -HcCCCCC---------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             1111110               0112334588999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=8.2e-35  Score=249.99  Aligned_cols=183  Identities=22%  Similarity=0.300  Sum_probs=138.4

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      +.||+|+||.||+|..  +|..||+|++...                                             +|..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4799999999999999  7889999988632                                             1111


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.|++.||+|||   +.+|+||||||+|||++.++.++|+|||+++.......   ...
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~  154 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN---RAS  154 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC---cee
Confidence                           455678999999999999   99999999999999999999999999999865322111   112


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ..      +.+    
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~--------~~~~~~~~~~-~~------~~~----  215 (316)
T cd05620         155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--------EDELFESIRV-DT------PHY----  215 (316)
T ss_pred             ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CC------CCC----
Confidence            2578999999999998899999999999999999999999986432        1111111110 00      000    


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHH-HHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIV-QVA  274 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-ev~  274 (284)
                            +......+.+++.+||+.||++||++. +++
T Consensus       216 ------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         216 ------PRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             ------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence                  001223477999999999999999984 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.5e-34  Score=240.93  Aligned_cols=193  Identities=24%  Similarity=0.358  Sum_probs=149.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------------CCC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------------FPF--   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------------~~~--   92 (284)
                      .+|...+.||+|+||.||++...|..||+|.+...                                        ++.  
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~   85 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   85 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCC
Confidence            46777889999999999999999999999998654                                        110  


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ....+.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++........     
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~-----  157 (256)
T cd05082          86 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----  157 (256)
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCC-----
Confidence                           0345789999999999999   99999999999999999999999999999876543221     


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                       ...++..|+|||++....++.++|||||||++|+|++ |..||....        ........ ..+....        
T Consensus       158 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~-~~~~~~~--------  219 (256)
T cd05082         158 -TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRV-EKGYKMD--------  219 (256)
T ss_pred             -CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-hcCCCCC--------
Confidence             1345678999999988889999999999999999998 888875322        12221111 1110000        


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                             ....++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       220 -------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         220 -------APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             -------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence                   0112234578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1e-34  Score=250.11  Aligned_cols=184  Identities=22%  Similarity=0.276  Sum_probs=140.3

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CCC--
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FPF--   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~~--   92 (284)
                      +.||+|+||.||++..  +|..||+|++...                                            +|.  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4799999999999998  7899999998642                                            111  


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                   +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........   ...
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---~~~  154 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKT  154 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc---ccc
Confidence                         1456678999999999999   999999999999999999999999999998754222111   112


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      ..||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ...      .+     
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~~~~-~~~------~~-----  214 (323)
T cd05595         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILM-EEI------RF-----  214 (323)
T ss_pred             ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHhc-CCC------CC-----
Confidence            568999999999998899999999999999999999999986432        1111111110 000      00     


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                           +......+.+++.+||+.||++||     ++.++++
T Consensus       215 -----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         215 -----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             -----CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence                 011233478999999999999998     7888765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.7e-36  Score=259.23  Aligned_cols=196  Identities=23%  Similarity=0.324  Sum_probs=147.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +|+.||+|++...                                           
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            3677888999999999999999  6899999998632                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC--
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE--  151 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~--  151 (284)
                       +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.......  
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence             1111               455678999999999999   9999999999999999999999999999997765432  


Q ss_pred             ------------------------ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 039895          152 ------------------------THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD  207 (284)
Q Consensus       152 ------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~  207 (284)
                                              ..........||+.|+|||++.+..++.++|||||||++|||++|..||....   
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~---  234 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT---  234 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC---
Confidence                                    00011123578999999999999999999999999999999999999986532   


Q ss_pred             CccccHHHHHHHHhhc-CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHHH
Q 039895          208 GEDYRLQDLVKKYIEN-ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-IVQVAKQ  276 (284)
Q Consensus       208 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~ev~~~  276 (284)
                           ........... ....              .+.....+..+.+++.+||. +|.+||+ +.++++.
T Consensus       235 -----~~~~~~~i~~~~~~~~--------------~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         235 -----LQETYNKIINWKESLR--------------FPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             -----HHHHHHHHhccCCccc--------------CCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence                 11111111110 0000              00011123447899999997 9999999 9999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-37  Score=241.57  Aligned_cols=193  Identities=23%  Similarity=0.336  Sum_probs=147.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|+....||+|.|+.||++..  +|+.+|+|++...                                           
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            4455567899999999999998  8999999887644                                           


Q ss_pred             ------CCCc---------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC---CcceeeccccccccCCCC
Q 039895           90 ------FPFS---------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE---NVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ------~~~~---------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~Dfg~a~~~~~~~  151 (284)
                            .|.+         ...-..+.||+.+|.|+|   .++|||||+||.|+|+.+.   .-+||+|||+|..+.++.
T Consensus        91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~  167 (355)
T KOG0033|consen   91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE  167 (355)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence                  1111         223347899999999999   9999999999999999643   357999999999988444


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ....    ..|||+|||||++...+|+..+|||+.||+||-++.|..||++..     ...+.+.+..            
T Consensus       168 ~~~G----~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~-----~~rlye~I~~------------  226 (355)
T KOG0033|consen  168 AWHG----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYEQIKA------------  226 (355)
T ss_pred             cccc----ccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc-----HHHHHHHHhc------------
Confidence            3322    689999999999999999999999999999999999999998633     1222222211            


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          +.+....|......++..+|+.+||..||.+|.|+.|.++
T Consensus       227 ----g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  227 ----GAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             ----cccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence                1111111122233445789999999999999999999875

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-35  Score=250.86  Aligned_cols=182  Identities=23%  Similarity=0.289  Sum_probs=138.0

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CCC----
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FPF----   92 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~~----   92 (284)
                      ||+|+||.||+|..  ++..||+|++...                                            +|.    
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999999  6889999988642                                            111    


Q ss_pred             -----------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcc
Q 039895           93 -----------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        93 -----------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                 ......++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+++.......   ......
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~  154 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD---KTNTFC  154 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC---cccccc
Confidence                       1455678999999999999   99999999999999999999999999999875432221   112257


Q ss_pred             cCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCC
Q 039895          162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLM  241 (284)
Q Consensus       162 gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
                      ||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ...      .        
T Consensus       155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~--------~~~~~~~~~~-~~~------~--------  211 (312)
T cd05585         155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN--------VNEMYRKILQ-EPL------R--------  211 (312)
T ss_pred             CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC--------HHHHHHHHHc-CCC------C--------
Confidence            8999999999999899999999999999999999999986432        1222222111 100      0        


Q ss_pred             ChhhHHHHHHHHHHHHHhhcCCCCCCCC---HHHHHH
Q 039895          242 WPEKEQQLLICTELAFKCLSESEGDRPT---IVQVAK  275 (284)
Q Consensus       242 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~ev~~  275 (284)
                        .+......+.+++.+||+.||++||+   +.|++.
T Consensus       212 --~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         212 --FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             --CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence              01112234789999999999999985   555543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3.3e-34  Score=248.96  Aligned_cols=161  Identities=23%  Similarity=0.401  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD  176 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (284)
                      +.++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++........... .....+++.|+|||++.+..
T Consensus       182 ~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~  257 (343)
T cd05103         182 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPETIFDRV  257 (343)
T ss_pred             HHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh-cCCCCCCcceECcHHhcCCC
Confidence            457889999999999   99999999999999999999999999999876543322111 11134567899999998888


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHH
Q 039895          177 FSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTEL  255 (284)
Q Consensus       177 ~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (284)
                      ++.++||||||+++|++++ |..|+.....    .   .... .....+.....               +......+.++
T Consensus       258 ~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~---~~~~-~~~~~~~~~~~---------------~~~~~~~~~~~  314 (343)
T cd05103         258 YTIQSDVWSFGVLLWEIFSLGASPYPGVKI----D---EEFC-RRLKEGTRMRA---------------PDYTTPEMYQT  314 (343)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCCccc----c---HHHH-HHHhccCCCCC---------------CCCCCHHHHHH
Confidence            9999999999999999997 8777753220    0   0111 11111110000               00112347899


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          256 AFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       256 ~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                      +..||+.+|++|||+.||++.|+.+++.+
T Consensus       315 ~~~cl~~~p~~Rps~~eil~~l~~~~~~~  343 (343)
T cd05103         315 MLDCWHGEPSQRPTFSELVEHLGNLLQAN  343 (343)
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.4e-35  Score=257.13  Aligned_cols=190  Identities=19%  Similarity=0.217  Sum_probs=153.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +-|+.++-||.|+.|.|-.|++  +|+.+|||++.+.                                           
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            5688899999999999999999  9999999998765                                           


Q ss_pred             ----------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 ----------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ----------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                      -..+....+++.||+.|+.|+|   ..+|+||||||+|+|+|.++.+||+|||+|..-..+...
T Consensus        92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklL  168 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLL  168 (786)
T ss_pred             EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCccc
Confidence                            0111667889999999999999   999999999999999999999999999999665443322


Q ss_pred             ccCCCCcccCccccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                          .+.+|+|.|.|||++.+.+|. .++||||+|||||.|+||+-||++.+        +.. +...+..+.+.     
T Consensus       169 ----eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN--------ir~-LLlKV~~G~f~-----  230 (786)
T KOG0588|consen  169 ----ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN--------IRV-LLLKVQRGVFE-----  230 (786)
T ss_pred             ----cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc--------HHH-HHHHHHcCccc-----
Confidence                226899999999999999986 79999999999999999999997433        222 22222233221     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                 .+...+.++++|+.+|+..||+.|.|+.||+++
T Consensus       231 -----------MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  231 -----------MPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             -----------CCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence                       123334458899999999999999999999864

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.6e-34  Score=249.31  Aligned_cols=186  Identities=18%  Similarity=0.249  Sum_probs=138.2

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCC-
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPF-   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~-   92 (284)
                      +.||+|+||.||+|..  +++.||+|++...                                             +|. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999998  7789999998743                                             111 


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    +..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++........   ..
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---~~  154 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT---TS  154 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc---ee
Confidence                          1456679999999999999   999999999999999999999999999998753221111   11


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||.....  ....................  +        
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~--~--------  222 (327)
T cd05617         155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITD--NPDMNTEDYLFQVILEKPIR--I--------  222 (327)
T ss_pred             cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCC--CcccccHHHHHHHHHhCCCC--C--------
Confidence            25789999999999988999999999999999999999999964321  11111112222211111100  0        


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                            +......+.+++.+||+.||++||++
T Consensus       223 ------p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         223 ------PRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             ------CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence                  11122336799999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-34  Score=255.59  Aligned_cols=217  Identities=17%  Similarity=0.156  Sum_probs=150.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe----CCcceEEEeecCC------------------------------------CC---
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL----QDRPISVMKFEDT------------------------------------FP---   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~------------------------------------~~---   91 (284)
                      ..|.....||+|+||.||++..    .+..||+|.+...                                    ++   
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  171 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCD  171 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCCC
Confidence            4688889999999999999976    3567999988654                                    00   


Q ss_pred             -----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           92 -----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        92 -----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                                 .....+.++.||+.||.|||   +.+|+||||||+|||++.++.++|+|||++..+....... .....
T Consensus       172 l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~-~~~~~  247 (392)
T PHA03207        172 LFTYVDRSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP-QCYGW  247 (392)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccc-ccccc
Confidence                       01466789999999999999   9999999999999999999999999999997665432221 11225


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccccccc------
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEIVDPA------  233 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------  233 (284)
                      .||+.|+|||++....++.++|||||||++|||++|..||....... ....+...+...... ..+.......      
T Consensus       248 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  326 (392)
T PHA03207        248 SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS-SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFK  326 (392)
T ss_pred             ccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC-cHHHHHHHHHHhccCccccCCccchhHHHHHH
Confidence            79999999999998899999999999999999999999997654211 111111111111000 0000000000      


Q ss_pred             -ccCCCCCCChhh-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          234 -IVGEEGLMWPEK-----EQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       234 -~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                       ........++.+     ......+.+++.+||..||++|||+.|++..
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        327 QYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             hhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence             000000000000     1123347789999999999999999999864

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=5.5e-35  Score=255.73  Aligned_cols=146  Identities=22%  Similarity=0.294  Sum_probs=121.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||+||++..  +++.||+|++...                                           
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4688889999999999999998  7889999998642                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+......
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~  157 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT  157 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence             2211               456678999999999999   999999999999999999999999999998765321100


Q ss_pred             --------------------------------ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039895          154 --------------------------------INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY  201 (284)
Q Consensus       154 --------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~  201 (284)
                                                      ........||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence                                            000112579999999999998899999999999999999999999996


Q ss_pred             CC
Q 039895          202 SS  203 (284)
Q Consensus       202 ~~  203 (284)
                      ..
T Consensus       238 ~~  239 (363)
T cd05628         238 SE  239 (363)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.2e-34  Score=249.30  Aligned_cols=179  Identities=22%  Similarity=0.268  Sum_probs=137.0

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      +.||+|+||.||+|..  +++.||+|++...                                             +|..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999998  6889999988632                                             1111


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........   ..
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~---~~  154 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT---TS  154 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc---cc
Confidence                           445678999999999999   999999999999999999999999999998754322111   12


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||....        ......... ....   ..       
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~--------~~~~~~~i~-~~~~---~~-------  215 (320)
T cd05590         155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAIL-NDEV---VY-------  215 (320)
T ss_pred             ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHh-cCCC---CC-------
Confidence            2578999999999998889999999999999999999999986432        111111111 1110   00       


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                            +......+.+++.+||+.||++||++
T Consensus       216 ------~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         216 ------PTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             ------CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence                  01122347899999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.1e-34  Score=244.60  Aligned_cols=199  Identities=19%  Similarity=0.320  Sum_probs=148.2

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~------------------------------------   89 (284)
                      +.++|+..+.||+|+||.||+|.+.       +..||+|++...                                    
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4577999999999999999999863       356999987532                                    


Q ss_pred             ------CCCc-------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 ------FPFS-------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ------~~~~-------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                            ++..                         ...+.++.|++.||.|||   +.+++|+||||+||+++.++.++|
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence                  1110                         134668899999999999   899999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||++............ ....+++.|+|||++.+..++.++|||||||++||+++ |..||....        .....
T Consensus       161 ~dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~--------~~~~~  231 (277)
T cd05062         161 GDFGMTRDIYETDYYRKG-GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS--------NEQVL  231 (277)
T ss_pred             CCCCCccccCCcceeecC-CCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHH
Confidence            999998766543332211 11345788999999988889999999999999999999 677765322        11111


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .... .......               +...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus       232 ~~~~-~~~~~~~---------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         232 RFVM-EGGLLDK---------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HHHH-cCCcCCC---------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            1111 1111110               11123357899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=8.4e-35  Score=245.99  Aligned_cols=156  Identities=21%  Similarity=0.325  Sum_probs=117.5

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      ...++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......... .....+++.|+|||.+.+.
T Consensus       126 ~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  201 (283)
T cd05091         126 FVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKL-MGNSLLPIRWMSPEAIMYG  201 (283)
T ss_pred             HHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCceEecccccccccccchheee-ccCccCCccccCHHHHhcC
Confidence            4568899999999999   99999999999999999999999999999876643322111 1123467889999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++|||||||++|||++ |..||....        ......... ......               .+..++..+.+
T Consensus       202 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~i~-~~~~~~---------------~~~~~~~~~~~  257 (283)
T cd05091         202 KFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--------NQDVIEMIR-NRQVLP---------------CPDDCPAWVYT  257 (283)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHH-cCCcCC---------------CCCCCCHHHHH
Confidence            89999999999999999998 777765322        112222111 111110               01223344789


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      ++..||+.+|++||++.+|+..|+.
T Consensus       258 li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         258 LMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHhCCCcccCCCHHHHHHHhhC
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=2.1e-34  Score=248.30  Aligned_cols=188  Identities=18%  Similarity=0.240  Sum_probs=142.1

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||.||+|..  +++.||||++...                                             
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            45567899999999999998  7899999998532                                             


Q ss_pred             --CCC--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 --FPF--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 --~~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                        +|.              ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........ 
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-  156 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD-  156 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC-
Confidence              111              1456779999999999999   99999999999999999999999999999865432211 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                        ......|++.|+|||++.+..++.++|||||||++|||++|..||....        ........... ...  .   
T Consensus       157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~--------~~~~~~~i~~~-~~~--~---  220 (324)
T cd05589         157 --RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD--------EEEVFDSIVND-EVR--Y---  220 (324)
T ss_pred             --cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhC-CCC--C---
Confidence              1123578999999999998899999999999999999999999986432        11111111111 000  0   


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                                 +...+..+.+++.+||+.||++||     ++.++++
T Consensus       221 -----------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         221 -----------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             -----------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence                       011223477999999999999999     4666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-34  Score=240.34  Aligned_cols=198  Identities=22%  Similarity=0.356  Sum_probs=149.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CC-
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FP-   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~-   91 (284)
                      .++|...+.||+|++|.||+|.+ +++.||+|.+...                                        ++ 
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK   84 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence            35678889999999999999998 6678999998753                                        11 


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      .......++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++...........
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05068          85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR  161 (261)
T ss_pred             CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence                            01456789999999999999   99999999999999999999999999999987753322111


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                        .....+..|+|||++.+..++.++||||||+++||+++ |..||....        ....... .... ...      
T Consensus       162 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~-~~~~-~~~------  223 (261)
T cd05068         162 --EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--------NAEVLQQ-VDQG-YRM------  223 (261)
T ss_pred             --CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHH-HHcC-CCC------
Confidence              11223467999999988889999999999999999999 888875422        1111111 1111 000      


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                              +.....+..+.+++.+||+.+|++||++.+++..|+++
T Consensus       224 --------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         224 --------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             --------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence                    00112234588999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2.2e-34  Score=247.29  Aligned_cols=183  Identities=21%  Similarity=0.304  Sum_probs=138.6

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCC-
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPF-   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~-   92 (284)
                      +.||+|+||.||+|..  ++..||+|++...                                             +|. 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999998  6788999987542                                             111 


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........   ..
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~  154 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK---TC  154 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc---ee
Confidence                          0455678999999999999   999999999999999999999999999998754322111   11


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        ............       +..    
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~i~~~~-------~~~----  215 (316)
T cd05619         155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD--------EEELFQSIRMDN-------PCY----  215 (316)
T ss_pred             eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-------CCC----
Confidence            2568999999999998899999999999999999999999986432        111111111100       000    


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHH-HHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIV-QVA  274 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-ev~  274 (284)
                            +......+.+++.+||+.+|++||++. ++.
T Consensus       216 ------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         216 ------PRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             ------CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence                  001123377999999999999999997 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.1e-34  Score=249.73  Aligned_cols=184  Identities=19%  Similarity=0.248  Sum_probs=139.8

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      ++||+|+||.||+|..  +++.||+|++...                                             +|..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4699999999999998  6789999988642                                             1111


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........   ..
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~---~~  154 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT---TT  154 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc---cc
Confidence                           345678999999999999   999999999999999999999999999998754322211   12


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ...   ..       
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~--------~~~~~~~i~~-~~~---~~-------  215 (321)
T cd05591         155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN--------EDDLFESILH-DDV---LY-------  215 (321)
T ss_pred             ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC--------HHHHHHHHHc-CCC---CC-------
Confidence            2568999999999998899999999999999999999999986432        1111111111 110   00       


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCC-------CHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRP-------TIVQVAK  275 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-------s~~ev~~  275 (284)
                            +......+.+++.+||+.||++||       ++.++++
T Consensus       216 ------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         216 ------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             ------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence                  001123478999999999999999       7777764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.3e-35  Score=233.83  Aligned_cols=198  Identities=21%  Similarity=0.294  Sum_probs=157.1

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------   89 (284)
                      ....+.|...++||.|..++|.++..  .|...|+|++...                                       
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            34456788889999999999999988  8899999998654                                       


Q ss_pred             --------------------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccc
Q 039895           90 --------------------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL  143 (284)
Q Consensus        90 --------------------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~  143 (284)
                                                ..++....+|+.|+..|+.|||   ..+||||||||+|||++++..++|+|||+
T Consensus        93 es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGF  169 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccce
Confidence                                      1111456789999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +..+..+.....    .+|||+|.|||.+.-      ..|+..+|+||+||++|.++.|.+||.-..         +...
T Consensus       170 a~~l~~GekLre----lCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk---------QmlM  236 (411)
T KOG0599|consen  170 ACQLEPGEKLRE----LCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK---------QMLM  236 (411)
T ss_pred             eeccCCchhHHH----hcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH---------HHHH
Confidence            999987765443    789999999998653      247889999999999999999999997321         2222


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ...+..+.            +....|...+......+|+.+||+.||.+|.|+.|+++.
T Consensus       237 LR~ImeGk------------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  237 LRMIMEGK------------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             HHHHHhcc------------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            22332322            112223334555567899999999999999999999853

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.4e-34  Score=250.12  Aligned_cols=143  Identities=19%  Similarity=0.230  Sum_probs=118.8

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------C-----
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------F-----   90 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------~-----   90 (284)
                      ...+|...+.||+|+||.||+|..  ++..||+|+....                                   +     
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l  143 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDL  143 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCCcH
Confidence            346799999999999999999999  6678999975433                                   0     


Q ss_pred             ----------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           91 ----------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        91 ----------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                                .....+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........    ...
T Consensus       144 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~----~~~  216 (357)
T PHA03209        144 YTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF----LGL  216 (357)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCccc----ccc
Confidence                      011456789999999999999   999999999999999999999999999998754322111    125


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~  202 (284)
                      .||+.|+|||++.+..++.++|||||||++|||+++..++..
T Consensus       217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~  258 (357)
T PHA03209        217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFE  258 (357)
T ss_pred             cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcccc
Confidence            689999999999988999999999999999999997666543

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-35  Score=255.81  Aligned_cols=188  Identities=24%  Similarity=0.339  Sum_probs=148.7

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      -|+..+-||.|+||.||.+.+  +...||||++.-.                                            
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            356667899999999999999  8899999998633                                            


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      ||..               ..+..|+.+.+.||+|||   +.+.||||||..|||+++.|.+||+|||.|....+..+  
T Consensus       107 YClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAns--  181 (948)
T KOG0577|consen  107 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANS--  181 (948)
T ss_pred             HHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCchhc--
Confidence            4443               456678999999999999   99999999999999999999999999999876654333  


Q ss_pred             cCCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                           ++|||.|||||++.   .+.|+-++||||+|+++.|+.-.++|.+..+        ..........+.      .
T Consensus       182 -----FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN--------AMSALYHIAQNe------s  242 (948)
T KOG0577|consen  182 -----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNE------S  242 (948)
T ss_pred             -----ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch--------HHHHHHHHHhcC------C
Confidence                 79999999999875   5679999999999999999999999987543        111111111111      1


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      |.+.         ..+....+..++..||+.-|.+|||..+++..
T Consensus       243 PtLq---------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  243 PTLQ---------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             CCCC---------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            1111         12344558899999999999999999998764

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.9e-35  Score=258.96  Aligned_cols=200  Identities=20%  Similarity=0.300  Sum_probs=147.1

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------   89 (284)
                      ....++|...+.||+|+||.||++..  +++.+|+|++...                                       
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            33457788899999999999999998  6889999988532                                       


Q ss_pred             -----CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 -----FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -----~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                           +|..              .....++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++......
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~  195 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET  195 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence                 2211              446678999999999999   999999999999999999999999999999876443


Q ss_pred             CccccCCCCcccCccccccccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTG----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      .....  ....||+.|+|||++...    .++.++||||+||++|||++|..||....        ..............
T Consensus       196 ~~~~~--~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~--------~~~~~~~i~~~~~~  265 (370)
T cd05621         196 GMVRC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS--------LVGTYSKIMDHKNS  265 (370)
T ss_pred             Cceec--ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCcc
Confidence            22211  236799999999998654    37889999999999999999999996532        11111111111100


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD--RPTIVQVAKQ  276 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~ev~~~  276 (284)
                                   ..+|........+.+++..||..+|.+  |||+.|++++
T Consensus       266 -------------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         266 -------------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             -------------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence                         001111223344778999999855543  8999998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.1e-35  Score=257.05  Aligned_cols=194  Identities=18%  Similarity=0.232  Sum_probs=145.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||++..  +|+.||+|++...                                           
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4678889999999999999998  7899999998643                                           


Q ss_pred             -CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|..                .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.....
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM  157 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence             1110                344568899999999999   99999999999999999999999999999987654332


Q ss_pred             cccCCCCcccCcccccccccc------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          153 HINDSNRVIGTFGFMAPEYRT------TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ...  ....||+.|+|||++.      ...++.++|||||||++|||++|..||....        ..............
T Consensus       158 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~--------~~~~~~~i~~~~~~  227 (330)
T cd05601         158 VNS--KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT--------SAKTYNNIMNFQRF  227 (330)
T ss_pred             eee--ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC--------HHHHHHHHHcCCCc
Confidence            211  1246899999999986      4567899999999999999999999986432        11111111111110


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..             ++........+.+|+..||+ +|.+|||+.+++.
T Consensus       228 ~~-------------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         228 LK-------------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             cC-------------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            00             01111223347889999998 9999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=4.1e-34  Score=241.43  Aligned_cols=202  Identities=23%  Similarity=0.337  Sum_probs=153.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-C-----CcceEEEeecCC--------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-Q-----DRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~-----~~~vavK~~~~~--------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+ +     +..|++|.+...                                      
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            35677889999999999999998 4     578999987643                                      


Q ss_pred             -----CC-----------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           90 -----FP-----------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        90 -----~~-----------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                           ++                       .......++.|++.||+|||   +.+++|+||||+||+++.++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence                 00                       01345678999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHH
Q 039895          142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      |+++.+......... ....++..|+|||++.+..++.++|||||||++||+++ |..||....     ...+.....  
T Consensus       162 g~~~~~~~~~~~~~~-~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~--  233 (280)
T cd05043         162 ALSRDLFPMDYHCLG-DNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID-----PFEMAAYLK--  233 (280)
T ss_pred             CCcccccCCceEEeC-CCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC-----HHHHHHHHH--
Confidence            999876443322111 11346778999999988889999999999999999999 888885422     111111111  


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                       .....                +....++..+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus       234 -~~~~~----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         234 -DGYRL----------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             -cCCCC----------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence             11000                00112234578999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=3.5e-34  Score=243.16  Aligned_cols=161  Identities=24%  Similarity=0.348  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      .+.++.|++.||.|||   +.+++||||||+|||+++++.++|+|||+++.......... .....++..|+|||.+.+.
T Consensus       129 ~~~i~~~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~apE~~~~~  204 (290)
T cd05045         129 LISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVK-RSKGRIPVKWMAIESLFDH  204 (290)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhc-ccCCCCCccccCHHHHccC
Confidence            3688999999999999   99999999999999999999999999999876543322211 1123457789999998888


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++||||||++++||++ |..||....     ...+...    .....     .          ++.+......+.+
T Consensus       205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~----~~~~~-----~----------~~~~~~~~~~~~~  260 (290)
T cd05045         205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-----PERLFNL----LKTGY-----R----------MERPENCSEEMYN  260 (290)
T ss_pred             CcchHhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH----HhCCC-----C----------CCCCCCCCHHHHH
Confidence            89999999999999999998 888875322     1111111    11110     0          0001122335889


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                      ++..||+.+|++||++.++++.|+++..+|
T Consensus       261 ~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~~  290 (290)
T cd05045         261 LMLTCWKQEPDKRPTFADISKELEKMMVKS  290 (290)
T ss_pred             HHHHHccCCcccCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=9e-35  Score=251.96  Aligned_cols=188  Identities=21%  Similarity=0.297  Sum_probs=143.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--C-CcceEEEeecCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--Q-DRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+  . +..||+|++...                                          
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            5688889999999999999987  2 357999988532                                          


Q ss_pred             --CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        +|..               .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++........
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~  186 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY  186 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcc
Confidence              1111               345678999999999999   99999999999999999999999999999977643221


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                            ...||+.|+|||++.+..++.++|||||||++|||++|..||....     .   ........ .+...  +. 
T Consensus       187 ------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~---~~~~~~i~-~~~~~--~p-  248 (340)
T PTZ00426        187 ------TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-----P---LLIYQKIL-EGIIY--FP-  248 (340)
T ss_pred             ------eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-----H---HHHHHHHh-cCCCC--CC-
Confidence                  2578999999999988889999999999999999999999996432     1   11111111 11100  00 


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~~  276 (284)
                                   ......+.+++.+||+.+|++|+     |+.++++.
T Consensus       249 -------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        249 -------------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             -------------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence                         11122367999999999999995     88888753

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-35  Score=257.19  Aligned_cols=196  Identities=20%  Similarity=0.269  Sum_probs=144.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4688889999999999999999  7899999998632                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               +.....++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+......
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  157 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT  157 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence             111               1456678999999999999   999999999999999999999999999998765322110


Q ss_pred             c-----------------------------------cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 039895          154 I-----------------------------------NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK  198 (284)
Q Consensus       154 ~-----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~  198 (284)
                      .                                   .......||+.|+|||++....++.++|||||||++|||++|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~  237 (364)
T cd05599         158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP  237 (364)
T ss_pred             cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence            0                                   00012469999999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC---HHHHHH
Q 039895          199 ISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT---IVQVAK  275 (284)
Q Consensus       199 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~ev~~  275 (284)
                      ||....        .............  ...           .+........+.+++.+|+. +|.+|++   +.|+++
T Consensus       238 Pf~~~~--------~~~~~~~i~~~~~--~~~-----------~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         238 PFCSDN--------PQETYRKIINWKE--TLQ-----------FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             CCCCCC--------HHHHHHHHHcCCC--ccC-----------CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            996432        1111111111000  000           00011122347789999996 9999998   888865

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-36  Score=266.81  Aligned_cols=220  Identities=21%  Similarity=0.338  Sum_probs=174.5

Q ss_pred             CCCCCcceecHHHHHHHhcCCC---------CCCeeeecCCceEEEEEe--CC---cceEEEeecCCCCCc---------
Q 039895           37 GKHNPIRSFSADELKTATDDFD---------GGKVIMKCLFYKLYKGFL--QD---RPISVMKFEDTFPFS---------   93 (284)
Q Consensus        37 ~~~~~~~~~~~~~l~~~~~~f~---------~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~~~~~---------   93 (284)
                      |...=+.-++|+|-.+|...|.         ++++||.|.||.|++|.+  .|   ..||||-++..+...         
T Consensus       602 G~k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EA  681 (996)
T KOG0196|consen  602 GTKTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEA  681 (996)
T ss_pred             CceeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhh
Confidence            3444556678888877776663         467899999999999999  34   579999998772211         


Q ss_pred             -------------------------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccc
Q 039895           94 -------------------------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIK  124 (284)
Q Consensus        94 -------------------------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlk  124 (284)
                                                                       .+.+.++.+||.|+.||-   +.+.|||||.
T Consensus       682 sIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLA  758 (996)
T KOG0196|consen  682 SIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLA  758 (996)
T ss_pred             hhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhh
Confidence                                                             456778999999999999   9999999999


Q ss_pred             cCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 039895          125 PTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSS  203 (284)
Q Consensus       125 p~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~  203 (284)
                      .+|||++++-.+|++|||+++.+.++.........-.-+..|.|||.+...+++.++||||||+++||+++ |.+|+...
T Consensus       759 ARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm  838 (996)
T KOG0196|consen  759 ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM  838 (996)
T ss_pred             hhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence            99999999999999999999988665422222211122568999999999999999999999999999876 88887643


Q ss_pred             CCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .        .++.+...                +.+.+.|.+++|+..+.+||+.||+.|..+||.+.||+..|.++..+
T Consensus       839 S--------NQdVIkaI----------------e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  839 S--------NQDVIKAI----------------EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             c--------hHHHHHHH----------------HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            3        22222221                12345566889999999999999999999999999999999999754

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=2.2e-34  Score=240.57  Aligned_cols=196  Identities=26%  Similarity=0.325  Sum_probs=142.4

Q ss_pred             CeeeecCCceEEEEEe-----CCcceEEEeecCC-----------------------------CCC--------------
Q 039895           61 KVIMKCLFYKLYKGFL-----QDRPISVMKFEDT-----------------------------FPF--------------   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~-----------------------------~~~--------------   92 (284)
                      +.||+|+||.||+|.+     .+..||+|.+...                             .|.              
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            4689999999999987     2347999987532                             010              


Q ss_pred             ----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc-
Q 039895           93 ----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN-  155 (284)
Q Consensus        93 ----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~-  155 (284)
                                      ....+.++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.......... 
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence                            0345678899999999999   89999999999999999999999999999876543221111 


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                      ......++..|+|||.+....++.++|||||||++|||++|..|++...    .   ......... .+...        
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~----~---~~~~~~~~~-~~~~~--------  221 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----D---SFDITVYLL-QGRRL--------  221 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC----C---HHHHHHHHh-cCCCC--------
Confidence            1112346778999999988889999999999999999999655443211    1   111111111 11000        


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                             +.+...+..+.+++..||+.+|++||++.+|++.|+++..
T Consensus       222 -------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         222 -------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             -------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence                   0011123358899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=5.2e-34  Score=239.00  Aligned_cols=198  Identities=23%  Similarity=0.330  Sum_probs=149.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--C---CcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--Q---DRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|.+  .   ...||+|.+...                                        
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            5688899999999999999998  2   347999988644                                        


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.|++.||.|||   +.+|+|+||||+|||++.++.++|+|||++.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence              11                01456788999999999999   9999999999999999999999999999998775221


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .... .....+++.|+|||.+.+..++.++||||||+++|++++ |..||....        ........ ......   
T Consensus       161 ~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~-~~~~~~---  227 (266)
T cd05033         161 ATYT-TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS--------NQDVIKAV-EDGYRL---  227 (266)
T ss_pred             ccee-ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC--------HHHHHHHH-HcCCCC---
Confidence            1111 111345678999999988889999999999999999998 888875322        11111111 111000   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                                  +....++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       228 ------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         228 ------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             ------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                        00112234578999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3.5e-34  Score=238.71  Aligned_cols=194  Identities=19%  Similarity=0.290  Sum_probs=146.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CCC-
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FPF-   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~~-   92 (284)
                      ++|+..+.||+|+||.||++.+ ++..+|+|.+...                                        ++. 
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~   83 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN   83 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence            4577778999999999999999 6668999987643                                        111 


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||.+...........  
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~--  158 (256)
T cd05114          84 GCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS--  158 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceecc--
Confidence                           0345779999999999999   99999999999999999999999999999876643322211  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....++..|+|||++.+..++.++||||||+++||+++ |+.||....        ....+........   ...+    
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--------~~~~~~~i~~~~~---~~~~----  223 (256)
T cd05114         159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--------NYEVVEMISRGFR---LYRP----  223 (256)
T ss_pred             CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHCCCC---CCCC----
Confidence            11345678999999988889999999999999999999 888875422        1122222111110   0001    


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                               ......+.+++.+||+.+|++|||+.++++.|
T Consensus       224 ---------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         224 ---------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             ---------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence                     11123478999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=4.9e-34  Score=239.18  Aligned_cols=200  Identities=25%  Similarity=0.356  Sum_probs=152.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|..  ++..+|||.+...                                           
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4677788999999999999997  8899999977532                                           


Q ss_pred             -CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                       ++                   .+.....++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence             00                   01345678999999999999   99999999999999999999999999999876643


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .....   ....|+..|+|||.+.+..++.++||||||+++|+|++|..||....      ........... ...    
T Consensus       159 ~~~~~---~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~~~----  224 (267)
T cd08229         159 KTTAA---HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIE-QCD----  224 (267)
T ss_pred             CCccc---ccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc------chHHHHhhhhh-cCC----
Confidence            32211   12468899999999988889999999999999999999999986432      11111111111 000    


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                       .+..         ........+.+++.+||+.+|++|||+.+|++.++++.
T Consensus       225 -~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         225 -YPPL---------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             -CCCC---------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence             0000         01123445889999999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=4.6e-34  Score=242.20  Aligned_cols=201  Identities=19%  Similarity=0.271  Sum_probs=151.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..       ++..+|+|.+...                                      
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            4677889999999999999985       2356899987643                                      


Q ss_pred             ---CC----------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 ---FP----------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ---~~----------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                         ++                            .....+.++.|++.||+|||   +.+++||||||+|||++.++.++|
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence               11                            11345679999999999999   999999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||++........... .....+++.|+|||++.+..++.++|||||||++++|++ |..||....        .....
T Consensus       162 ~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~--------~~~~~  232 (288)
T cd05093         162 GDFGMSRDVYSTDYYRV-GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEVI  232 (288)
T ss_pred             ccCCccccccCCceeec-CCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH
Confidence            99999976644322111 112345788999999988889999999999999999998 888875432        11111


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ... ..+.....               ....+..+.+|+.+||+.+|.+|||+.+|++.|+++...
T Consensus       233 ~~i-~~~~~~~~---------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         233 ECI-TQGRVLQR---------------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HHH-HcCCcCCC---------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            111 11111110               011223488999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-34  Score=238.39  Aligned_cols=196  Identities=21%  Similarity=0.256  Sum_probs=147.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|++|.||.+..  ++..||+|.+...                                           
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5788999999999999999987  7899999987532                                           


Q ss_pred             ---CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         ++.               ......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.......
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~  158 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC  158 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence               110               0345678999999999999   9999999999999999999999999999987654322


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..........|+..|+|||++.+..++.++||||||+++||+++|+.||....     .   ..............    
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~---~~~~~~~~~~~~~~----  226 (263)
T cd06625         159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE-----A---MAAIFKIATQPTNP----  226 (263)
T ss_pred             cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc-----h---HHHHHHHhccCCCC----
Confidence            21111122467889999999998889999999999999999999999985422     0   11111111110000    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                 ..+......+.+++.+||..+|++|||+.++++.
T Consensus       227 -----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         227 -----------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             -----------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence                       0011223347899999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=3.2e-34  Score=247.03  Aligned_cols=184  Identities=19%  Similarity=0.263  Sum_probs=141.0

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|+..+.||+|+||+||+|..  +|+.||+|++...                                            
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            467778999999999999998  7889999988632                                            


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               +.....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++........
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence             111               1556779999999999999   999999999999999999999999999998754322211


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .....||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ....      
T Consensus       158 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--------~~~~~~~i~~-~~~~------  219 (323)
T cd05615         158 ---TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED--------EDELFQSIME-HNVS------  219 (323)
T ss_pred             ---ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CCCC------
Confidence               122568999999999998899999999999999999999999986432        1111111111 1100      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                      .          +......+.+++.+||+.+|.+|++.
T Consensus       220 ~----------p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         220 Y----------PKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             C----------CccCCHHHHHHHHHHcccCHhhCCCC
Confidence            0          01122347799999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=7.6e-35  Score=251.17  Aligned_cols=185  Identities=21%  Similarity=0.271  Sum_probs=140.3

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CCC--
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FPF--   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~~--   92 (284)
                      +.||+|+||.||++..  +|..||+|++...                                            +|.  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999998  7899999998643                                            111  


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                   +.....++.||+.||.|||   + .+|+||||||+|||++.++.+||+|||+++........   ..
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---~~  154 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MK  154 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc---cc
Confidence                         1456678999999999999   7 79999999999999999999999999998754322111   11


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||....        ......... ....      .+    
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~--------~~~~~~~i~-~~~~------~~----  215 (325)
T cd05594         155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELIL-MEEI------RF----  215 (325)
T ss_pred             cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC--------HHHHHHHHh-cCCC------CC----
Confidence            2568999999999998899999999999999999999999986432        111111111 1100      00    


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAKQ  276 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~~  276 (284)
                            +......+.+++.+||+.||++|+     ++.++++.
T Consensus       216 ------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         216 ------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             ------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence                  011223478999999999999996     89988753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=5e-34  Score=238.12  Aligned_cols=193  Identities=19%  Similarity=0.296  Sum_probs=143.7

Q ss_pred             eeeecCCceEEEEEe----CCcceEEEeecCC-----------------------------------------CC-----
Q 039895           62 VIMKCLFYKLYKGFL----QDRPISVMKFEDT-----------------------------------------FP-----   91 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-----------------------------------------~~-----   91 (284)
                      .||+|+||.||+|.+    .+..||+|++...                                         ++     
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            389999999999987    3446999988644                                         00     


Q ss_pred             -----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           92 -----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        92 -----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                                 ....++.++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||++................
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence                       11456789999999999999   8999999999999999999999999999997664433222111112


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      .+++.|+|||++....++.++|||||||++||+++ |..||....        ..... .....+...            
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~-~~~~~~~~~------------  217 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--------GPEVM-SFIEQGKRL------------  217 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--------HHHHH-HHHHCCCCC------------
Confidence            34578999999988889999999999999999996 888886432        11111 111111100            


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                         +.+..++.++.+++.+||+.+|++||++.+|.+.|+.+.
T Consensus       218 ---~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~  256 (257)
T cd05115         218 ---DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY  256 (257)
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence               001123345789999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.6e-34  Score=237.63  Aligned_cols=194  Identities=23%  Similarity=0.337  Sum_probs=145.9

Q ss_pred             CeeeecCCceEEEEEe--CC---cceEEEeecCC-----------------------------------------C----
Q 039895           61 KVIMKCLFYKLYKGFL--QD---RPISVMKFEDT-----------------------------------------F----   90 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~-----------------------------------------~----   90 (284)
                      +.||+|+||.||+|.+  .+   ..+|+|.+...                                         +    
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            4799999999999987  22   67999987644                                         1    


Q ss_pred             -----------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           91 -----------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        91 -----------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                 ..+..+..++.|++.||.|||   ..+++|+||||+|||++.++.+||+|||+++..............
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence                       111556789999999999999   899999999999999999999999999999876544332222212


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ..++..|+|||.+.+..++.++||||||+++|++++ |..||....     .......+.   .....            
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-----~~~~~~~~~---~~~~~------------  217 (257)
T cd05060         158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-----GAEVIAMLE---SGERL------------  217 (257)
T ss_pred             ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHH---cCCcC------------
Confidence            234568999999988889999999999999999998 888875322     111111111   11100            


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                          +.+...+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       218 ----~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         218 ----PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             ----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence                001122345789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=5.2e-34  Score=240.81  Aligned_cols=197  Identities=21%  Similarity=0.316  Sum_probs=146.5

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~   91 (284)
                      +|...++||+|+||.||+|..  ++..||+|++...                                          ++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            566778999999999999998  7889999987533                                          11


Q ss_pred             C-----------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           92 F-----------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        92 ~-----------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                      .           +.....++.|++.||.|||   +.+|+|+||||+|||++.++.++|+|||++........     ...
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~-----~~~  153 (279)
T cd06619          82 DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA-----KTY  153 (279)
T ss_pred             CCCChHHhhcCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc-----cCC
Confidence            1           0345679999999999999   99999999999999999999999999999876543221     125


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL  240 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
                      .||..|+|||++.+..++.++|||||||++|++++|..||......... ........... ....     +.+.     
T Consensus       154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~-~~~~-----~~~~-----  221 (279)
T cd06619         154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-LMPLQLLQCIV-DEDP-----PVLP-----  221 (279)
T ss_pred             CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-cchHHHHHHHh-ccCC-----CCCC-----
Confidence            7899999999999888999999999999999999999998653211111 11111111111 1100     0000     


Q ss_pred             CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                          .......+.+++.+||+.+|++||++.|+++.
T Consensus       222 ----~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         222 ----VGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             ----CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                01122347899999999999999999999764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=3.2e-34  Score=239.55  Aligned_cols=196  Identities=22%  Similarity=0.340  Sum_probs=150.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CC---
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FP---   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~---   91 (284)
                      ++|...++||+|+||.||+|.. ++..||+|.+...                                       ++   
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~   85 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENG   85 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCC
Confidence            5677788999999999999998 7889999988754                                       11   


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||++...........  
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~--  160 (260)
T cd05067          86 SLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR--  160 (260)
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc--
Confidence                          01445678999999999999   99999999999999999999999999999977653322111  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....++..|+|||++....++.++||||||+++||+++ |..||....     .   ....... ......         
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~---~~~~~~~-~~~~~~---------  222 (260)
T cd05067         161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT-----N---PEVIQNL-ERGYRM---------  222 (260)
T ss_pred             cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC-----h---HHHHHHH-HcCCCC---------
Confidence            11346778999999988889999999999999999999 888885432     1   1111111 111000         


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                            +.....+..+.+++.+||+.+|++|||++++...|++
T Consensus       223 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         223 ------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             ------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence                  0011123348899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=9.7e-35  Score=248.78  Aligned_cols=210  Identities=16%  Similarity=0.216  Sum_probs=145.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|...+.||+|+||.||+|..  ++..||+|.+...                                          +
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            4577788999999999999998  7888999988633                                          1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      +.               ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.......... 
T Consensus        86 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-  161 (309)
T cd07872          86 LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY-  161 (309)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc-
Confidence            10               0345668899999999999   9999999999999999999999999999987653322111 


Q ss_pred             CCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEIVD  231 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  231 (284)
                        ....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.....     ......+.......   .++.+..
T Consensus       162 --~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
T cd07872         162 --SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV-----EDELHLIFRLLGTPTEETWPGISS  234 (309)
T ss_pred             --ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCCHHHHhhhcc
Confidence              12467899999998765 4688999999999999999999999865431     11111111111000   0000000


Q ss_pred             ------ccccCCC-CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 ------PAIVGEE-GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ------~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            ....... .............+.+++.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence                  0000000 0000001123345789999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.3e-34  Score=249.53  Aligned_cols=180  Identities=25%  Similarity=0.313  Sum_probs=137.9

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      +.||+|+||+||+|..  +|+.||+|++...                                             +|..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4799999999999999  7899999998632                                             1111


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........   ...
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~~~  154 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK---TTS  154 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC---ccc
Confidence                           345668999999999999   99999999999999999999999999999865422211   112


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ....  +.       
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~-~~~~--~~-------  216 (323)
T cd05575         155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------TAEMYDNILN-KPLR--LK-------  216 (323)
T ss_pred             cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC--------HHHHHHHHHc-CCCC--CC-------
Confidence            2568999999999998899999999999999999999999986432        1122211111 1000  00       


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIV  271 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  271 (284)
                             ......+.+++.+||+.||.+||++.
T Consensus       217 -------~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         217 -------PNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             -------CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence                   11133478999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-35  Score=253.57  Aligned_cols=195  Identities=24%  Similarity=0.282  Sum_probs=160.1

Q ss_pred             CCCeeeecCCceEEEEEeC----C--cceEEEeecCCC-----------------------------CCc----------
Q 039895           59 GGKVIMKCLFYKLYKGFLQ----D--RPISVMKFEDTF-----------------------------PFS----------   93 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~~----~--~~vavK~~~~~~-----------------------------~~~----------   93 (284)
                      ..++||.|-||.||+|.+.    |  -.||||..+..+                             |.+          
T Consensus       393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~  472 (974)
T KOG4257|consen  393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELA  472 (974)
T ss_pred             HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecc
Confidence            4568999999999999992    2  258999888751                             111          


Q ss_pred             ------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           94 ------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        94 ------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                        ...+.++.||+.||+|||   +...|||||-.+|||+.+.-.+|++|||+++.+.+...+..
T Consensus       473 ~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka  549 (974)
T KOG4257|consen  473 PLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA  549 (974)
T ss_pred             cchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhc
Confidence                              455678999999999999   99999999999999999999999999999999987765543


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      ..  ..-+..|||||.+....++.++|||-|||++||+++ |..||.+-..                  .      |-..
T Consensus       550 S~--~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN------------------s------DVI~  603 (974)
T KOG4257|consen  550 SR--GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN------------------S------DVIG  603 (974)
T ss_pred             cc--cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc------------------c------ceEE
Confidence            32  344678999999999999999999999999999876 8889875431                  1      1111


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .-+.+.+.|.++.|++.+..|+.+||+++|.+||++.++...|.++++
T Consensus       604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            222344566778888999999999999999999999999999999886

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.7e-34  Score=241.33  Aligned_cols=195  Identities=24%  Similarity=0.312  Sum_probs=145.6

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      .+++.|+..+.||+|+||.||+|..  +++.||+|++...                                        
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            4567788889999999999999998  7889999998533                                        


Q ss_pred             -------CCC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           90 -------FPF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        90 -------~~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                             +|.                 +.....++.|++.||+|||   +.+|+|+||+|+||+++.++.++|+|||++.
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence                   000                 0345668999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCCccccCCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          146 SIPEGETHINDSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      .......   ......|++.|+|||++.     ...++.++|||||||++|||++|..||....     .  ..... . 
T Consensus       160 ~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~-----~--~~~~~-~-  227 (272)
T cd06637         160 QLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----P--MRALF-L-  227 (272)
T ss_pred             ecccccc---cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----H--HHHHH-H-
Confidence            6543221   112257899999999875     3357889999999999999999999985422     0  01100 0 


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..........              ....+..+.+|+.+||+.+|.+|||+.++++
T Consensus       228 ~~~~~~~~~~--------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         228 IPRNPAPRLK--------------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HhcCCCCCCC--------------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            0011101110              0112234789999999999999999999975

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4.8e-35  Score=256.61  Aligned_cols=204  Identities=18%  Similarity=0.283  Sum_probs=148.9

Q ss_pred             HHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------
Q 039895           47 ADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------   89 (284)
Q Consensus        47 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------   89 (284)
                      +.++....++|...+.||+|+||.||++..  +++.+|+|++...                                   
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            334444568899999999999999999999  7889999997531                                   


Q ss_pred             ---------CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 ---------FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 ---------~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                               +|..              .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~  191 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK  191 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence                     2211              345668999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTG----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      .........  ....||+.|+|||++...    .++.++|||||||++|||++|..||....        ..........
T Consensus       192 ~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~~  261 (371)
T cd05622         192 MNKEGMVRC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIMN  261 (371)
T ss_pred             cCcCCcccc--cCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC--------HHHHHHHHHc
Confidence            654322211  225799999999998654    37899999999999999999999997533        1111122111


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD--RPTIVQVAKQ  276 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~ev~~~  276 (284)
                      ......             ++........+.+++..||..++.+  ||++.++++.
T Consensus       262 ~~~~~~-------------~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         262 HKNSLT-------------FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             CCCccc-------------CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            111000             1111223344778999999844433  7899998864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.2e-33  Score=236.73  Aligned_cols=200  Identities=25%  Similarity=0.374  Sum_probs=153.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|..  +|+.||+|.+...                                           
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5788899999999999999999  7899999987531                                           


Q ss_pred             -CCC-------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -FPF-------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -~~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                       +|.                   ...+..++.+++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence             111                   1345678999999999999   99999999999999999999999999999876543


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....   .....+++.|+|||.+.+..++.++|||||||++|++++|..||....      ........... .+.....
T Consensus       159 ~~~~---~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~~~~~~~  228 (267)
T cd08224         159 KTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIE-KCDYPPL  228 (267)
T ss_pred             CCcc---cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC------ccHHHHHhhhh-cCCCCCC
Confidence            3211   112468889999999988889999999999999999999999986432      12222221111 1111100


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                                   + .......+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus       229 -------------~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         229 -------------P-ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             -------------C-hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence                         0 1123345789999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.6e-34  Score=246.25  Aligned_cols=184  Identities=20%  Similarity=0.270  Sum_probs=140.0

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCC-
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPF-   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~-   92 (284)
                      +.||+|+||.||+|..  ++..||+|++...                                             +|. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999  6789999988632                                             111 


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    +.....++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||+++........   ..
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~  154 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT---TS  154 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc---cc
Confidence                          1455678999999999999   999999999999999999999999999998653222111   11


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||....        ......... .....  .        
T Consensus       155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~--------~~~~~~~i~-~~~~~--~--------  215 (318)
T cd05570         155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD--------EDELFQSIL-EDEVR--Y--------  215 (318)
T ss_pred             ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC--------HHHHHHHHH-cCCCC--C--------
Confidence            2568999999999999999999999999999999999999986432        111111111 11100  0        


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH-----HHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTI-----VQVAK  275 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~ev~~  275 (284)
                            +......+.+|+.+||+.||++|||+     .++++
T Consensus       216 ------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         216 ------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             ------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence                  01122347899999999999999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=6.2e-34  Score=238.74  Aligned_cols=200  Identities=20%  Similarity=0.341  Sum_probs=149.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCc---ceEEEeecCC---------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDR---PISVMKFEDT---------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~---~vavK~~~~~---------------------------------------   89 (284)
                      .++|+..+.||+|+||.||+|..  ++.   .+|+|.+...                                       
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            35788889999999999999998  333   6999987643                                       


Q ss_pred             ---CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ---FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ---~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                         ++                .......++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||++......
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence               00                00356789999999999999   999999999999999999999999999998766543


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ............++.|+|||++....++.++|||||||++||+++ |..||....        ..............   
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--------~~~~~~~i~~~~~~---  229 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--------NHEVMKAINDGFRL---  229 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--------HHHHHHHHhcCCCC---
Confidence            222111111233567999999988889999999999999999997 998885432        11111111111000   


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                                   +.....+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       230 -------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         230 -------------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             -------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                         11112334578999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=7.8e-34  Score=237.58  Aligned_cols=198  Identities=22%  Similarity=0.312  Sum_probs=150.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPF--   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~--   92 (284)
                      +.|...+.||+|+||.||+|.+ ++..||+|++...                                       ++.  
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~   85 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG   85 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCC
Confidence            4577888999999999999998 5567999988753                                       010  


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ....+.++.|++.||+|||   +.+++|+||||+||+++.++.++|+|||.+..+........  
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~--  160 (262)
T cd05071          86 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR--  160 (262)
T ss_pred             cHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccccc--
Confidence                           1345778999999999999   99999999999999999999999999999976654332211  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....++..|+|||+..+..++.++|||||||++|++++ |..||....     .   ............           
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-----~---~~~~~~~~~~~~-----------  221 (262)
T cd05071         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----N---REVLDQVERGYR-----------  221 (262)
T ss_pred             cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----h---HHHHHHHhcCCC-----------
Confidence            11346778999999988889999999999999999999 666764321     1   111111110000           


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                           .+.....+..+.+++.+||+.+|++|||+.++++.|++.+
T Consensus       222 -----~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         222 -----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             -----CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence                 0111233445889999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.6e-34  Score=249.16  Aligned_cols=183  Identities=25%  Similarity=0.291  Sum_probs=138.5

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      +.||+|+||.||+|..  +++.||+|++...                                             +|..
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            3699999999999998  6788999998532                                             1110


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......   ...
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~---~~~  154 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG---TTS  154 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC---Ccc
Confidence                           344568999999999999   99999999999999999999999999999875432211   112


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||....        .......... ...  ...       
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~-~~~--~~~-------  216 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILN-KPL--QLK-------  216 (325)
T ss_pred             cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC--------HHHHHHHHHh-CCc--CCC-------
Confidence            2579999999999999899999999999999999999999996432        1111111111 100  001       


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                             ......+.+++.+||+.+|.+||++.+.+
T Consensus       217 -------~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         217 -------PNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             -------CCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence                   11223478999999999999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.9e-34  Score=240.94  Aligned_cols=190  Identities=29%  Similarity=0.449  Sum_probs=139.8

Q ss_pred             CCeeeecCCceEEEEEeC------CcceEEEeecCC------------------------------------------CC
Q 039895           60 GKVIMKCLFYKLYKGFLQ------DRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~~------~~~vavK~~~~~------------------------------------------~~   91 (284)
                      .+.||.|.||.||+|.+.      +..|+||.++..                                          +|
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            357999999999999996      678999999653                                          11


Q ss_pred             C-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           92 F-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        92 ~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      .                 ...+..++.||+.||.|||   +.+++|+||+++|||++.++.+||+|||++..........
T Consensus        84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             ccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc
Confidence            1                 1567889999999999999   8999999999999999999999999999998773332221


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                       ......+...|+|||.+....++.++||||||+++||+++ |..|+...        ......... ..+.....    
T Consensus       161 -~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--------~~~~~~~~~-~~~~~~~~----  226 (259)
T PF07714_consen  161 -NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--------DNEEIIEKL-KQGQRLPI----  226 (259)
T ss_dssp             -ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--------CHHHHHHHH-HTTEETTS----
T ss_pred             -ccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccc-ccccccee----
Confidence             1112456788999999988889999999999999999999 56776432        122222222 11111110    


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                                 +..++..+.+++..||+.+|++|||+.++++.|
T Consensus       227 -----------~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  227 -----------PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             -----------BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             -----------ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence                       112233478999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=5.1e-34  Score=238.27  Aligned_cols=196  Identities=22%  Similarity=0.338  Sum_probs=148.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CC---
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FP---   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~---   91 (284)
                      ++|...+.||+|+||.||+|.. ++..+|+|.+...                                       ++   
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~   85 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKG   85 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCC
Confidence            4577788999999999999998 6678999998753                                       00   


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    ....+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++............ 
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~-  161 (260)
T cd05070          86 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ-  161 (260)
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc-
Confidence                          01346789999999999999   899999999999999999999999999999776443222111 


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                       ...++..|+|||++.+..++.++||||||+++|++++ |..||....        ..............          
T Consensus       162 -~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~----------  222 (260)
T cd05070         162 -GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--------NREVLEQVERGYRM----------  222 (260)
T ss_pred             -CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHcCCCC----------
Confidence             1345678999999988889999999999999999999 777775422        11111111111000          


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                            +.+...+..+.+++.+||+.+|++|||+.++.+.|++
T Consensus       223 ------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         223 ------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             ------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                  0111223458899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1e-34  Score=255.55  Aligned_cols=197  Identities=19%  Similarity=0.224  Sum_probs=140.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .|...+.||+|+||+||+|..  ++..||+|++...                                            
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            577788999999999999998  7889999998542                                            


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc-
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-  153 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  153 (284)
                      +|..               .....++.||+.||.|||   ..+|+||||||+|||++.++.+||+|||++..+...... 
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~  158 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK  158 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence            2211               344567889999999999   999999999999999999999999999997543210000 


Q ss_pred             -------------------------------------------ccCCCCcccCccccccccccCCCCCcchhHHHHHHHH
Q 039895          154 -------------------------------------------INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALL  190 (284)
Q Consensus       154 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il  190 (284)
                                                                 ........||+.|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il  238 (381)
T cd05626         159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL  238 (381)
T ss_pred             cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence                                                       0001125799999999999888899999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHH--hhcCCCCCCC
Q 039895          191 LELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFK--CLSESEGDRP  268 (284)
Q Consensus       191 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--cl~~~p~~Rp  268 (284)
                      |||++|..||....     .   ...............             .+........+.+++.+  |+..+|..||
T Consensus       239 ~elltG~~Pf~~~~-----~---~~~~~~i~~~~~~~~-------------~~~~~~~s~~~~dli~~ll~~~~~~~~R~  297 (381)
T cd05626         239 FEMLVGQPPFLAPT-----P---TETQLKVINWENTLH-------------IPPQVKLSPEAVDLITKLCCSAEERLGRN  297 (381)
T ss_pred             HHHHhCCCCCcCCC-----H---HHHHHHHHccccccC-------------CCCCCCCCHHHHHHHHHHccCcccccCCC
Confidence            99999999996532     0   111111110000000             01111122346678877  5566677799


Q ss_pred             CHHHHHHH
Q 039895          269 TIVQVAKQ  276 (284)
Q Consensus       269 s~~ev~~~  276 (284)
                      ++.++++.
T Consensus       298 ~~~~~l~h  305 (381)
T cd05626         298 GADDIKAH  305 (381)
T ss_pred             CHHHHhcC
Confidence            99999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=9.1e-34  Score=240.72  Aligned_cols=201  Identities=21%  Similarity=0.279  Sum_probs=151.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      .+|...+.||+|+||.||+|..       ++..+++|.+...                                      
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            3567778999999999999985       2346889987643                                      


Q ss_pred             ---CC-------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc
Q 039895           90 ---FP-------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV  135 (284)
Q Consensus        90 ---~~-------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~  135 (284)
                         ++                               ....++.++.||+.||+|||   +.+|+||||||+|||++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence               11                               01245789999999999999   999999999999999999999


Q ss_pred             ceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHH
Q 039895          136 AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQ  214 (284)
Q Consensus       136 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~  214 (284)
                      ++|+|||++........... .....++..|+|||++.+..++.++|||||||++|||++ |..||....        ..
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------~~  232 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRV-GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--------NT  232 (291)
T ss_pred             EEECCCCcccccCCCceeec-CCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HH
Confidence            99999999976644332111 112456788999999988889999999999999999999 888875432        11


Q ss_pred             HHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .... ....+.....               ....+..+.+++.+||+.+|++|||+.+|++.|+++..+
T Consensus       233 ~~~~-~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         233 EVIE-CITQGRVLER---------------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             HHHH-HHhCCCCCCC---------------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            1111 1111111111               111233478999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.5e-34  Score=267.96  Aligned_cols=155  Identities=25%  Similarity=0.374  Sum_probs=111.9

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC----C-----------CCccccCCCC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP----E-----------GETHINDSNR  159 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~----~-----------~~~~~~~~~~  159 (284)
                      ...+++.+|++||.|+|   ++|||||||||.||++++++.+||+|||+|....    .           ........+.
T Consensus       698 ~~wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts  774 (1351)
T KOG1035|consen  698 EAWRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTS  774 (1351)
T ss_pred             HHHHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccc
Confidence            34578999999999999   9999999999999999999999999999998721    0           1111223345


Q ss_pred             cccCccccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          160 VIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~---~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      .+||..|+|||++.+..   |+.|+|+||+||+++||+.   ||....       .-...+ ..+..+.++.-  +.+  
T Consensus       775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM-------ERa~iL-~~LR~g~iP~~--~~f--  839 (1351)
T KOG1035|consen  775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM-------ERASIL-TNLRKGSIPEP--ADF--  839 (1351)
T ss_pred             ccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchH-------HHHHHH-HhcccCCCCCC--ccc--
Confidence            78999999999987654   9999999999999999975   443321       111111 12223333332  000  


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              .....+.-..++.++++.||++||||.|+++
T Consensus       840 --------~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  840 --------FDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             --------ccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence                    0111122358999999999999999999985

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=7e-34  Score=239.84  Aligned_cols=197  Identities=21%  Similarity=0.315  Sum_probs=147.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-C------CcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-Q------DRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~------~~~vavK~~~~~--------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.. +      +..||+|++...                                      
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            4577778999999999999987 2      368999998654                                      


Q ss_pred             ----CCC-----------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 ----FPF-----------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 ----~~~-----------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                          ++.                             ......++.|++.||.|||   +.+++||||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence                110                             0234668999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~  215 (284)
                      +|+|||++........... .....+++.|+|||++.+..++.++|||||||++|||++ |..||....     ......
T Consensus       162 kl~d~g~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~-----~~~~~~  235 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRV-GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS-----NEEVIE  235 (280)
T ss_pred             EECCcccceecccCcceec-CCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Confidence            9999999876543322111 112346788999999999999999999999999999998 998886432     111111


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .+.    .+.....               +...+..+.+++.+||+.+|++|||+.||++.|++
T Consensus       236 ~~~----~~~~~~~---------------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         236 CIT----QGRLLQR---------------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             HHH----cCCcCCC---------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            111    1111100               11223447899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.6e-34  Score=242.21  Aligned_cols=212  Identities=22%  Similarity=0.250  Sum_probs=148.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe------CCcceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..      ++..||+|.+...                                       
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4677788999999999999974      5778999998543                                       


Q ss_pred             ----CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ----FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ----~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                          ++                ....+..++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++.....
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence                00                00445678999999999999   99999999999999999999999999999987654


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ............++..|+|||++.+..++.++|||||||+++||++|..++.....         .+.............
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---------~~~~~~~~~~~~~~~  231 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---------EFMRMMGNDKQGQMI  231 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---------hhhhhcccccccccc
Confidence            33221111112345569999999888899999999999999999998776532210         000000000000000


Q ss_pred             cc---ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          230 VD---PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       230 ~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      ..   ..+..  ....+.....+..+.+|+.+||+.+|++|||+.||++.|+++
T Consensus       232 ~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         232 VYHLIELLKN--NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             hHHHHHHHhc--CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            00   00000  000111122334588999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=9.1e-34  Score=250.15  Aligned_cols=160  Identities=19%  Similarity=0.352  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD  176 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (284)
                      +.++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||+++.......... .....+++.|+|||++.+..
T Consensus       240 ~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~  315 (400)
T cd05105         240 LSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVS-KGSTFLPVKWMAPESIFDNL  315 (400)
T ss_pred             HHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccc-cCCcCCCcceEChhhhcCCC
Confidence            468899999999999   99999999999999999999999999999986643322111 11245678899999998888


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHH
Q 039895          177 FSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTEL  255 (284)
Q Consensus       177 ~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (284)
                      ++.++|||||||++|||++ |..||.....        ..........+..               ++.....+..+.++
T Consensus       316 ~~~~~DiwSlGvil~ellt~g~~P~~~~~~--------~~~~~~~~~~~~~---------------~~~~~~~~~~l~~l  372 (400)
T cd05105         316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIV--------DSTFYNKIKSGYR---------------MAKPDHATQEVYDI  372 (400)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCcccch--------hHHHHHHHhcCCC---------------CCCCccCCHHHHHH
Confidence            9999999999999999997 8888754220        0001111111100               00112234458899


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          256 AFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       256 ~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      +.+||+.+|++|||+.+|.+.|+++.++
T Consensus       373 i~~cl~~dP~~RPt~~~l~~~l~~l~~~  400 (400)
T cd05105         373 MVKCWNSEPEKRPSFLHLSDIVESLLPS  400 (400)
T ss_pred             HHHHCccCHhHCcCHHHHHHHHHHHcCC
Confidence            9999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.1e-34  Score=236.95  Aligned_cols=193  Identities=20%  Similarity=0.283  Sum_probs=144.8

Q ss_pred             CCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CC---
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FP---   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~---   91 (284)
                      +|...+.||+|+||.||+|.+ .+..+|+|++...                                        ++   
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG   84 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence            467788999999999999998 6668999998653                                        11   


Q ss_pred             -------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           92 -------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        92 -------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                   .....+.++.|++.||.|||   +.+++||||||+||+++.++.+||+|||+++...........  
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~--  159 (256)
T cd05059          85 CLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ--  159 (256)
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccccccC--
Confidence                         01345789999999999999   999999999999999999999999999998766433222111  


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ...++..|+|||.+.+..++.++||||||+++|++++ |..||....     .   ........ .. .    ..     
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~---~~~~~~~~-~~-~----~~-----  220 (256)
T cd05059         160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS-----N---SEVVESVS-AG-Y----RL-----  220 (256)
T ss_pred             CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC-----H---HHHHHHHH-cC-C----cC-----
Confidence            1234567999999988889999999999999999999 777775322     1   11111111 11 0    00     


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                           +.+...+..+.+++.+||+.+|++|||+.|+++.|
T Consensus       221 -----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         221 -----YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             -----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence                 00112334588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.1e-35  Score=249.49  Aligned_cols=192  Identities=24%  Similarity=0.299  Sum_probs=157.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.+|+|+||.++....  ++..+++|.+...                                           
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            4677788999999999988877  8889999998655                                           


Q ss_pred             -CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 -FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 -~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                       ||..                 .....++.|++.|+.|||   +..|+|||||+.||+++.++.++|+|||+|+.+....
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence             3322                 556789999999999999   9999999999999999999999999999999987765


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ...   .+.+||+.||+||++.+.+|+.|+|||||||++|||++-+++|....        ....+......     .. 
T Consensus       161 ~~a---~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~--------m~~Li~ki~~~-----~~-  223 (426)
T KOG0589|consen  161 SLA---STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN--------MSELILKINRG-----LY-  223 (426)
T ss_pred             hhh---heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc--------hHHHHHHHhhc-----cC-
Confidence            222   23789999999999999999999999999999999999999997543        23333322211     11 


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                .|.+.....++..++..||..+|..||++.+++.+
T Consensus       224 ----------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  224 ----------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ----------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                      13345556668999999999999999999999876

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-33  Score=234.74  Aligned_cols=194  Identities=26%  Similarity=0.370  Sum_probs=150.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------------CC--
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------------FP--   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------------~~--   91 (284)
                      .++|...+.||.|+||.||+|...|+.||+|.+...                                        ++  
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   84 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK   84 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence            356788899999999999999999999999998755                                        11  


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 ---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                     .......++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||.+........    
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----  157 (256)
T cd05039          85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----  157 (256)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc----
Confidence                           11456789999999999999   99999999999999999999999999999977643222    


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                        ...++..|+|||.+....++.++||||||+++|++++ |..||....        ....... ........       
T Consensus       158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~-~~~~~~~~-------  219 (256)
T cd05039         158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPH-VEKGYRME-------  219 (256)
T ss_pred             --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHH-HhcCCCCC-------
Confidence              1334678999999988889999999999999999997 888875322        1111111 11110000       


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                              .+...+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus       220 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         220 --------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             --------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence                    0111234578999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=5.5e-34  Score=238.95  Aligned_cols=197  Identities=20%  Similarity=0.281  Sum_probs=145.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ++|...+.||+|+||.||+|..  ++..||+|++...                                         ++
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            5688889999999999999998  7889999988643                                         11


Q ss_pred             C---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 F---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      .               ......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.........   
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~---  162 (267)
T cd06646          89 GGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK---  162 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccccc---
Confidence            1               1355678999999999999   999999999999999999999999999999766432211   


Q ss_pred             CCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .....|++.|+|||.+.   ...++.++|||||||++|||++|..|+........        .. ......   ...+.
T Consensus       163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--------~~-~~~~~~---~~~~~  230 (267)
T cd06646         163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--------LF-LMSKSN---FQPPK  230 (267)
T ss_pred             cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--------he-eeecCC---CCCCC
Confidence            11256889999999874   34578899999999999999999999853320000        00 000000   00000


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                      .        ......+..+.+++.+||+.+|++|||++++++.|
T Consensus       231 ~--------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         231 L--------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             C--------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            0        00112234578999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=7.2e-34  Score=239.72  Aligned_cols=186  Identities=19%  Similarity=0.294  Sum_probs=138.8

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CCC----
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FPF----   92 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~~----   92 (284)
                      ||+|+||.||++..  +|+.+|+|.+...                                            +|.    
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999998  7899999988532                                            111    


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                   ......++.|++.||+|||   +.+|+||||||+||+++.++.++|+|||++.........    ..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~----~~  153 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI----TQ  153 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee----ec
Confidence                         0334678899999999999   999999999999999999999999999998776543221    12


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      ..|++.|+|||++.+..++.++||||+||++|||++|..||....    ............. ...... .         
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~----~~~~~~~~~~~~~-~~~~~~-~---------  218 (277)
T cd05607         154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK----EKVAKEELKRRTL-EDEVKF-E---------  218 (277)
T ss_pred             cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc----chhhHHHHHHHhh-cccccc-c---------
Confidence            468999999999988889999999999999999999999986432    1011111111111 111000 0         


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           .......+.+|+.+||+.||++||++.|+++
T Consensus       219 -----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         219 -----HQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             -----cccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence                 0112334789999999999999999977653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.5e-33  Score=240.95  Aligned_cols=202  Identities=20%  Similarity=0.284  Sum_probs=150.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe---------CCcceEEEeecCC-----------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL---------QDRPISVMKFEDT-----------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~-----------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..         ++..||+|.+...                                   
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            46678889999999999999975         2346999988643                                   


Q ss_pred             --------CCCc-------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE
Q 039895           90 --------FPFS-------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL  130 (284)
Q Consensus        90 --------~~~~-------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl  130 (284)
                              +|..                               ..++.++.||+.||.|||   +.+|+||||||+|||+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence                    1110                               124567899999999999   9999999999999999


Q ss_pred             ecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCc
Q 039895          131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGE  209 (284)
Q Consensus       131 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~  209 (284)
                      +.++.+||+|||+++.......... .....+++.|+|||++.+..++.++||||||+++|++++ |..||....     
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----  244 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKK-TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----  244 (304)
T ss_pred             cCCCcEEECCCccceeccccccccc-ccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----
Confidence            9999999999999987654332211 111345678999999988889999999999999999998 666664321     


Q ss_pred             cccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          210 DYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                         ......... ......               .+..++..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       245 ---~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         245 ---VEELFKLLK-EGHRMD---------------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             ---HHHHHHHHH-cCCcCC---------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence               222222111 111000               0112334588999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.6e-33  Score=240.58  Aligned_cols=200  Identities=23%  Similarity=0.358  Sum_probs=148.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc----ceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR----PISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+  +|.    .||+|.+...                                       
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            4567778999999999999997  554    4688877643                                       


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||+++......
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence              00                01356788999999999999   9999999999999999999999999999998765332


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ... ......++..|+|||++.+..++.++|||||||++||+++ |..||....     ......++    ......   
T Consensus       164 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-----~~~~~~~~----~~~~~~---  230 (303)
T cd05110         164 KEY-NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-----TREIPDLL----EKGERL---  230 (303)
T ss_pred             ccc-ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH----HCCCCC---
Confidence            211 1112345778999999988889999999999999999998 888875322     11111111    111000   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                  +....+...+.+++..||..+|++||++.++++.|+++.+
T Consensus       231 ------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         231 ------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             ------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                        0011122347899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=7.1e-34  Score=240.15  Aligned_cols=186  Identities=18%  Similarity=0.274  Sum_probs=139.8

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CC-----
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FP-----   91 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~-----   91 (284)
                      ||+|+||+||++..  +++.||+|++...                                            +|     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999999998  7889999998532                                            11     


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .+.....++.||+.||.|||   +.+|+||||||+||+++.++.++|+|||++..+......   .
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---~  154 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK---T  154 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc---c
Confidence                          11345678999999999999   999999999999999999999999999999766543221   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....||+.|+|||++.+..++.++|||||||++|||++|..||.....    ............ ....           
T Consensus       155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~-~~~~-----------  218 (280)
T cd05608         155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRIL-NDSV-----------  218 (280)
T ss_pred             cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCc----chhHHHHHHhhc-ccCC-----------
Confidence            125689999999999999999999999999999999999999864321    001111111110 0000           


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                           ..+...+..+.+++.+||+.||++||     |++++++
T Consensus       219 -----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         219 -----TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             -----CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence                 00112334478999999999999999     6677765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.1e-34  Score=244.94  Aligned_cols=184  Identities=22%  Similarity=0.288  Sum_probs=138.8

Q ss_pred             CeeeecCCceEEEEEe-----CCcceEEEeecCC---------------------------------------------C
Q 039895           61 KVIMKCLFYKLYKGFL-----QDRPISVMKFEDT---------------------------------------------F   90 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~---------------------------------------------~   90 (284)
                      +.||+|+||.||++..     .++.||+|++...                                             +
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999986     5678999988632                                             1


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |..               .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++........  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--  156 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV--  156 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc--
Confidence            111               344567899999999999   999999999999999999999999999998754322211  


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                       .....||+.|+|||++.+..++.++|||||||++|||++|..||....        ......... .+.. . +     
T Consensus       157 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~--------~~~~~~~~~-~~~~-~-~-----  219 (323)
T cd05584         157 -THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN--------RKKTIDKIL-KGKL-N-L-----  219 (323)
T ss_pred             -ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC--------HHHHHHHHH-cCCC-C-C-----
Confidence             112568999999999988889999999999999999999999986432        111111111 1110 0 0     


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                               +......+.+++.+||+.+|++||     ++.++++
T Consensus       220 ---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         220 ---------PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             ---------CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence                     111223478999999999999999     7887765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=5.1e-34  Score=242.34  Aligned_cols=201  Identities=22%  Similarity=0.317  Sum_probs=149.9

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~------------------------------------   89 (284)
                      ..++|+..+.||+|+||.||++...       ...+|+|.+...                                    
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            4466888889999999999999872       257899987643                                    


Q ss_pred             -------CCCc-------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -------FPFS-------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -------~~~~-------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                             +|..                               ...+.++.|++.||+|||   +.+|+|+||||+|||++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEc
Confidence                   1100                               234568999999999999   99999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~  210 (284)
                      .++.+||+|||+++.+......... ....++..|+|||++.+..++.++|||||||++||+++ |..||....      
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------  239 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKT-TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------  239 (293)
T ss_pred             CCCeEEeCccccccccccccceecc-CCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC------
Confidence            9999999999999876543322111 11335678999999988889999999999999999998 888875322      


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                        ........ ..+....               .+......+.+|+.+||+.+|++|||+.|+++.|+++.
T Consensus       240 --~~~~~~~~-~~~~~~~---------------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         240 --VEELFKLL-KEGYRME---------------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             --HHHHHHHH-HcCCcCC---------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence              11111111 1111000               01122344789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-34  Score=244.90  Aligned_cols=220  Identities=20%  Similarity=0.280  Sum_probs=152.0

Q ss_pred             CCCCeeeecCCceEEEEEeCCcceEEEeecCC------------------------------CC----------------
Q 039895           58 DGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------------FP----------------   91 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------------~~----------------   91 (284)
                      ....+||+|+||.||+|.++++.||||+|...                              .+                
T Consensus       213 ~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k  292 (534)
T KOG3653|consen  213 QLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK  292 (534)
T ss_pred             hhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence            34568999999999999999999999999654                              00                


Q ss_pred             ------------CchhHHHHHHHHHHHHHHhccC------CCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           92 ------------FSVSKLKIAIEIASAVAYLHVG------FSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ------------~~~~~~~i~~~i~~gL~~LH~~------~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                  +.....+++..+++||+|||+.      ..++|+|||||++|||+.+|+++.|+|||+|..+..+...
T Consensus       293 GsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~  372 (534)
T KOG3653|consen  293 GSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ  372 (534)
T ss_pred             CcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC
Confidence                        0055678999999999999953      3578999999999999999999999999999988755433


Q ss_pred             ccCCCCcccCccccccccccCCC-CC-----cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGD-FS-----EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      ... ...+||..|||||++.+.. +.     .+.||||+|.++||++++...+++.. .+.....+..-+..   ...+.
T Consensus       373 ~d~-~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~-vp~Yqlpfe~evG~---hPt~e  447 (534)
T KOG3653|consen  373 GDT-HGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGP-VPEYQLPFEAEVGN---HPTLE  447 (534)
T ss_pred             cch-hhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCC-CCcccCchhHHhcC---CCCHH
Confidence            222 2378999999999987642 21     46899999999999999876554311 11111111111111   11111


Q ss_pred             ccccccccCCCCCCChh---hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          228 EIVDPAIVGEEGLMWPE---KEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      ++..-.......+.+|.   ......-+.+.+..||..||+.|.|+.=|.+++.++..
T Consensus       448 ~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  448 EMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             HHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            11100000001111111   11233447899999999999999999999888887753

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.8e-34  Score=240.50  Aligned_cols=193  Identities=24%  Similarity=0.339  Sum_probs=145.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|...++||+|+||+||++..  +++.||+|++...                                            
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            366678999999999999998  7899999988532                                            


Q ss_pred             CCC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 FPF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ~~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      +|.                 ......++.|++.||.|||   +.+|+|+||||+||++++++.++|+|||++........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET  157 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence            110                 0345678999999999999   99999999999999999999999999999877543322


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .    ....|++.|+|||++.+..++.++||||+||++||+++|..||....     .......+........  ..   
T Consensus       158 ~----~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~--~~---  223 (285)
T cd05605         158 I----RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK-----EKVKREEVERRVKEDQ--EE---  223 (285)
T ss_pred             c----ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc-----hhhHHHHHHHHhhhcc--cc---
Confidence            1    12468999999999988889999999999999999999999986432     1111111111111100  00   


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~~  276 (284)
                                 .+...+..+.+|+.+||+.||++||     ++.++++.
T Consensus       224 -----------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         224 -----------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             -----------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence                       0112233478999999999999999     88888653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=3.9e-34  Score=238.97  Aligned_cols=198  Identities=22%  Similarity=0.362  Sum_probs=151.7

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC-----------------------------------------C
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      ...+|...+.||.|+||.||+|.. ++..+|+|++...                                         +
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            345688889999999999999999 7789999998654                                         1


Q ss_pred             CC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 PF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      |.                 ......++.|++.||.|||   +.+|+|+||+|+||+++.++.+||+|||.+.........
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence            11                 0345779999999999999   899999999999999999999999999999776543222


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ..   ...++..|+|||.+....++.++||||||++++++++ |..||....        .............       
T Consensus       161 ~~---~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~-------  222 (261)
T cd05148         161 SS---DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--------NHEVYDQITAGYR-------  222 (261)
T ss_pred             cc---CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHHhCCc-------
Confidence            11   1346778999999988889999999999999999998 788875322        1111111111000       


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                               .+.+..++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       223 ---------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         223 ---------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             ---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                     011122334578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=7.7e-34  Score=236.80  Aligned_cols=194  Identities=20%  Similarity=0.260  Sum_probs=145.4

Q ss_pred             CCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CCC--
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FPF--   92 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~~--   92 (284)
                      +|...+.||+|+||.||.|.+ ++..+|+|.+...                                        +|.  
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG   84 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence            466678899999999999998 4556999987653                                        110  


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    ...++.++.||+.||.|||   +.+++|+||||+||+++.++.+||+|||.++..........  .
T Consensus        85 ~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~--~  159 (256)
T cd05113          85 CLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS--V  159 (256)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec--C
Confidence                          1456789999999999999   99999999999999999999999999999876644332211  1


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ...++..|+|||++.+..++.++|||||||++|+|++ |..||....        ......... ......  .      
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~-~~~~~~--~------  222 (256)
T cd05113         160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--------NSETVEKVS-QGLRLY--R------  222 (256)
T ss_pred             CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--------HHHHHHHHh-cCCCCC--C------
Confidence            1345678999999988889999999999999999998 888875322        111111111 111000  0      


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                             .......+.+++.+||+.+|++|||+.+++..|+
T Consensus       223 -------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         223 -------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             -------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence                   0111244789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.9e-33  Score=243.29  Aligned_cols=141  Identities=22%  Similarity=0.289  Sum_probs=118.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|+..+.||+|+||.||++..  ++..+|+|++...                                          
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            36788899999999999999999  6788999987543                                          


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +|..               .....++.|++.||.|||   + .+|+|+||||+|||++.++.+||+|||++..+..... 
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-  159 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-  159 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc-
Confidence            1111               334578999999999999   6 4799999999999999999999999999876533211 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~  202 (284)
                          ....|+..|+|||++.+..++.++|||||||++|++++|..||..
T Consensus       160 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         160 ----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             ----ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                125689999999999888899999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.4e-34  Score=249.44  Aligned_cols=182  Identities=25%  Similarity=0.320  Sum_probs=138.5

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCC-
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPF-   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~-   92 (284)
                      +.||+|+||.||+|..  +|+.||+|++...                                             +|. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999998  7899999998532                                             111 


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......   ...
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~---~~~  154 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD---TTT  154 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC---Ccc
Confidence                          1456678999999999999   99999999999999999999999999999865422211   112


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ...  .+.+      
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~~~~-~~~--~~~~------  217 (325)
T cd05604         155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD--------VAEMYDNILH-KPL--VLRP------  217 (325)
T ss_pred             cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC--------HHHHHHHHHc-CCc--cCCC------
Confidence            2578999999999999899999999999999999999999986432        1111221111 100  0000      


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV  273 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  273 (284)
                              .....+.+++.+||+.+|.+||++.+.
T Consensus       218 --------~~~~~~~~ll~~ll~~~p~~R~~~~~~  244 (325)
T cd05604         218 --------GASLTAWSILEELLEKDRQRRLGAKED  244 (325)
T ss_pred             --------CCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence                    122337789999999999999988643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.5e-33  Score=240.11  Aligned_cols=198  Identities=21%  Similarity=0.280  Sum_probs=146.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc--ceEEEeecCC-----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR--PISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~--~vavK~~~~~-----------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|..  ++.  .+++|.+...                                         
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            4678889999999999999988  333  4688877632                                         


Q ss_pred             --CCC-------------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 --FPF-------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 --~~~-------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                        ++.                               ....+.++.|++.||+|||   +.+|+||||||+|||++.++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence              000                               0234678999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~  215 (284)
                      ||+|||++........    ......+..|+|||++....++.++|||||||++|||++ |..||....        ...
T Consensus       159 kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~--------~~~  226 (297)
T cd05089         159 KIADFGLSRGEEVYVK----KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT--------CAE  226 (297)
T ss_pred             EECCcCCCccccceec----cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHH
Confidence            9999999864322111    111223567999999988889999999999999999997 888885432        111


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ...... .+.     .+          +.+...+..+.+|+.+||+.+|.+|||+.++++.|+++.+.
T Consensus       227 ~~~~~~-~~~-----~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         227 LYEKLP-QGY-----RM----------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             HHHHHh-cCC-----CC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            111111 110     00          00112234478999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.6e-33  Score=238.17  Aligned_cols=197  Identities=25%  Similarity=0.386  Sum_probs=146.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe------CCcceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~---------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|.+      .+..||+|.+...                                       
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4577778999999999999985      4568999998742                                       


Q ss_pred             ---CCC--------------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC
Q 039895           90 ---FPF--------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN  134 (284)
Q Consensus        90 ---~~~--------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~  134 (284)
                         ++.                                ....+.++.|++.||.|||   +.+|+|+||||+|||++.++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence               110                                0123568999999999999   99999999999999999999


Q ss_pred             cceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccH
Q 039895          135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       135 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~  213 (284)
                      .+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||....     ....
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~-----~~~~  235 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRV-QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS-----NQEV  235 (283)
T ss_pred             cEEeccccccccccCCcceec-ccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHH
Confidence            999999999987644322111 112446778999999988889999999999999999998 888875432     1111


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      ...+    .......               .+..++..+.+++.+||+.+|++||++.+|++.|..
T Consensus       236 ~~~~----~~~~~~~---------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         236 IEMV----RKRQLLP---------------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHH----HcCCcCC---------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            1111    1111110               011223347899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-34  Score=254.62  Aligned_cols=197  Identities=20%  Similarity=0.267  Sum_probs=141.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..  +++.||+|++...                                           
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            3677889999999999999998  8899999987532                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+......
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  157 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS  157 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence             2211               334568999999999999   999999999999999999999999999998643211000


Q ss_pred             ------------c--------------------------------cCCCCcccCccccccccccCCCCCcchhHHHHHHH
Q 039895          154 ------------I--------------------------------NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGAL  189 (284)
Q Consensus       154 ------------~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~i  189 (284)
                                  .                                .......||+.|+|||++.+..++.++|||||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  237 (377)
T cd05629         158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI  237 (377)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence                        0                                00012469999999999998899999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCC--
Q 039895          190 LLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR--  267 (284)
Q Consensus       190 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R--  267 (284)
                      +|||++|..||....     .   ............  .+           .++........+.+++.+||. +|.+|  
T Consensus       238 l~elltG~~Pf~~~~-----~---~~~~~~i~~~~~--~~-----------~~p~~~~~s~~~~dli~~lL~-~~~~r~~  295 (377)
T cd05629         238 MFECLIGWPPFCSEN-----S---HETYRKIINWRE--TL-----------YFPDDIHLSVEAEDLIRRLIT-NAENRLG  295 (377)
T ss_pred             hhhhhcCCCCCCCCC-----H---HHHHHHHHccCC--cc-----------CCCCCCCCCHHHHHHHHHHhc-CHhhcCC
Confidence            999999999986432     1   111111111000  00           001111122347789999997 66665  


Q ss_pred             -CCHHHHHHH
Q 039895          268 -PTIVQVAKQ  276 (284)
Q Consensus       268 -ps~~ev~~~  276 (284)
                       +|+.|++..
T Consensus       296 r~~~~~~l~h  305 (377)
T cd05629         296 RGGAHEIKSH  305 (377)
T ss_pred             CCCHHHHhcC
Confidence             599998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=9.1e-34  Score=235.95  Aligned_cols=192  Identities=23%  Similarity=0.349  Sum_probs=147.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------CCC----
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------FPF----   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------~~~----   92 (284)
                      ++|...+.||+|+||.||+|..+++.||+|.+...                                      +|.    
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L   85 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNL   85 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCH
Confidence            45778899999999999999999999999998644                                      111    


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                   ....+.++.|++.||.|||   +.+++||||||+||+++.++.++|+|||++........      .
T Consensus        86 ~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~------~  156 (254)
T cd05083          86 VNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD------N  156 (254)
T ss_pred             HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCC------C
Confidence                         1456778999999999999   99999999999999999999999999999876433211      1


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...+..|+|||.+.+..++.++|||||||++|+|++ |..||....        ....... ...+....          
T Consensus       157 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~-~~~~~~~~----------  217 (254)
T cd05083         157 SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS--------LKEVKEC-VEKGYRME----------  217 (254)
T ss_pred             CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC--------HHHHHHH-HhCCCCCC----------
Confidence            334678999999988889999999999999999998 888875432        1111111 11110000          


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                           .....+..+.+++.+||+.+|+.||++.+++..|++
T Consensus       218 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         218 -----PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             -----CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence                 011223457899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=8e-34  Score=257.00  Aligned_cols=199  Identities=21%  Similarity=0.232  Sum_probs=155.7

Q ss_pred             CCCCCCeeeecCCceEEEEEe-CC-cceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-QD-RPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-~~-~~vavK~~~~~--------------------------------------------   89 (284)
                      .....+.|.+|||+.||.+.. .+ ..+|+|++...                                            
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev  117 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV  117 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence            344567899999999999999 44 89999998644                                            


Q ss_pred             -----CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 -----FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 -----~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                           ||..                 ...++|+.|+++|+++||.. ..+|||||||-+||||+.+|..||||||.+...
T Consensus       118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTK  196 (738)
T ss_pred             EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence                 4442                 67899999999999999954 778999999999999999999999999998654


Q ss_pred             CCCCccc------cCCCCcccCccccccccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          148 PEGETHI------NDSNRVIGTFGFMAPEYR---TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       148 ~~~~~~~------~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      .......      ...-...-|+.|+|||++   .+.+++.|+|||+|||+||.|+....||....              
T Consensus       197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------------  262 (738)
T KOG1989|consen  197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------------  262 (738)
T ss_pred             cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc--------------
Confidence            3322110      111113468999999975   46689999999999999999999999997542              


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                             -..+++      ..+.+|..+.....+.+||..||+.||++||++-+|+..+.+|..
T Consensus       263 -------~laIln------g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  263 -------KLAILN------GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             -------ceeEEe------ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence                   011111      122334445667779999999999999999999999999988764

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.1e-33  Score=238.47  Aligned_cols=197  Identities=20%  Similarity=0.327  Sum_probs=145.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~-------------------------------------   89 (284)
                      .++|...+.||+|++|.||+|.+.       +..||+|.+...                                     
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            467888899999999999999993       357888987533                                     


Q ss_pred             -----CC----------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceee
Q 039895           90 -----FP----------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLF  139 (284)
Q Consensus        90 -----~~----------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~  139 (284)
                           ++                      .....+.++.||+.||.|||   +.+++|+||||+||+++.++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence                 11                      00335679999999999999   99999999999999998765   58999


Q ss_pred             ccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHH
Q 039895          140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       140 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      |||+++.......... ......+..|+|||++.+..++.++|||||||++|||++ |..||....     .   .....
T Consensus       162 dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~-----~---~~~~~  232 (277)
T cd05036         162 DFGMARDIYRASYYRK-GGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT-----N---QEVME  232 (277)
T ss_pred             cCccccccCCccceec-CCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----H---HHHHH
Confidence            9999987643322211 111334568999999988889999999999999999997 888875432     1   11111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      ........ .               .+...+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus       233 ~~~~~~~~-~---------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         233 FVTGGGRL-D---------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHcCCcC-C---------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            11111100 0               01112345789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=3.4e-33  Score=233.37  Aligned_cols=196  Identities=22%  Similarity=0.314  Sum_probs=147.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPF--   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~--   92 (284)
                      ++|.....||+|++|.||+|.+ .+..+|+|.+...                                       ++.  
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~   85 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKG   85 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCC
Confidence            3467778999999999999998 5557999987643                                       000  


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ......++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++...........  
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~--  160 (260)
T cd05069          86 SLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR--  160 (260)
T ss_pred             CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc--
Confidence                           0345788999999999999   99999999999999999999999999999977644322111  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....++..|+|||...+..++.++||||||+++|++++ |..||....     .   .............          
T Consensus       161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~---~~~~~~~~~~~~~----------  222 (260)
T cd05069         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV-----N---REVLEQVERGYRM----------  222 (260)
T ss_pred             CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC-----H---HHHHHHHHcCCCC----------
Confidence            11346778999999988889999999999999999999 787775422     1   1111111111000          


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                            +.+...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus       223 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         223 ------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             ------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence                  0011223458899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=5.5e-34  Score=241.19  Aligned_cols=207  Identities=22%  Similarity=0.247  Sum_probs=149.5

Q ss_pred             CCCCCCeeeecCCceEEEEEe------CCcceEEEeecCC----------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~----------------------------------------   89 (284)
                      .|...+.||+|+||.||.+.+      ++..||+|.+...                                        
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            356678999999999999974      5778999998633                                        


Q ss_pred             ----CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ----FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ----~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                          ++                ....++.++.|++.||+|||   +.+++||||||+||+++.++.++|+|||++..+..
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence                01                11456789999999999999   99999999999999999999999999999987654


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC-------CCccccHHHHHHHHhh
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD-------DGEDYRLQDLVKKYIE  222 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~~  222 (284)
                      ............++..|+|||++.+..++.++|||||||++||++++..|.......       ..........+.. ..
T Consensus       162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  240 (284)
T cd05079         162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV-LE  240 (284)
T ss_pred             CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH-HH
Confidence            332211112245677899999998888999999999999999999987664321100       0000011111110 00


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      .+.               ..+.....+..+.+|+.+||+.+|++|||+.++++.|+++.
T Consensus       241 ~~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~  284 (284)
T cd05079         241 EGK---------------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL  284 (284)
T ss_pred             cCc---------------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence            000               00111123445889999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.6e-33  Score=254.45  Aligned_cols=191  Identities=19%  Similarity=0.204  Sum_probs=145.0

Q ss_pred             CCCCCeeeecCCceEEEEEe--C-CcceEEEeecCC-----------------------------------------CCC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--Q-DRPISVMKFEDT-----------------------------------------FPF   92 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~-----------------------------------------~~~   92 (284)
                      |...+.||+|+||.||+|..  + +..||+|.+...                                         +|.
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            77788999999999999988  4 677888876433                                         221


Q ss_pred             c-------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           93 S-------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        93 ~-------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      .                   .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+......
T Consensus       149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~  225 (478)
T PTZ00267        149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL  225 (478)
T ss_pred             CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence            1                   344568899999999999   999999999999999999999999999999876543221


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                       .......||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... +....     
T Consensus       226 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~--------~~~~~~~~~~-~~~~~-----  290 (478)
T PTZ00267        226 -DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS--------QREIMQQVLY-GKYDP-----  290 (478)
T ss_pred             -ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CCCCC-----
Confidence             11223579999999999998899999999999999999999999986432        1111211111 11100     


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                .+......+.+++.+||+.+|++|||+.+++.
T Consensus       291 ----------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        291 ----------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             ----------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence                      01122334789999999999999999999874

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.3e-33  Score=239.06  Aligned_cols=191  Identities=23%  Similarity=0.326  Sum_probs=143.7

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------C
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------F   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~   90 (284)
                      |+..+.||+|+||+||++..  +++.||+|.+...                                            +
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            66678999999999999999  7889999987532                                            1


Q ss_pred             C-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 P-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +                 .....+.++.|++.||.|||   +.+|+||||||+||+++.++.++|+|||++.........
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  158 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI  158 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccc
Confidence            1                 11345678999999999999   999999999999999999999999999998765433221


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....|+..|+|||++.+..++.++|||||||++|+|++|..||.....  .   ............  .....   
T Consensus       159 ----~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~--~---~~~~~~~~~~~~--~~~~~---  224 (285)
T cd05630         159 ----KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK--K---IKREEVERLVKE--VQEEY---  224 (285)
T ss_pred             ----cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCc--c---chHHHHHhhhhh--hhhhc---
Confidence                124689999999999988999999999999999999999999964321  0   000001111000  00000   


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                                 .......+.+|+..||+.||++|||     +.|+++
T Consensus       225 -----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         225 -----------SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             -----------CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence                       0112234789999999999999999     788876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.7e-33  Score=234.04  Aligned_cols=190  Identities=25%  Similarity=0.354  Sum_probs=140.4

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CC-----
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FP-----   91 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~-----   91 (284)
                      +.||+|+||.||+|..  +++.||+|.+...                                          ++     
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999999998  7899999987543                                          11     


Q ss_pred             -----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           92 -----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        92 -----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                                 .......++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++.......... .....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~  156 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS-TGGMK  156 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccc-cCCCC
Confidence                       01445779999999999999   9999999999999999999999999999987654322111 11111


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      .++..|+|||.+.+..++.++|||||||++||+++ |..|+....        ... ......... ..           
T Consensus       157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~--------~~~-~~~~~~~~~-~~-----------  215 (252)
T cd05084         157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS--------NQQ-TREAIEQGV-RL-----------  215 (252)
T ss_pred             CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC--------HHH-HHHHHHcCC-CC-----------
Confidence            23457999999988889999999999999999998 777764321        011 111111100 00           


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                         +.+...+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus       216 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         216 ---PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence               001122345889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=2.1e-33  Score=239.79  Aligned_cols=200  Identities=20%  Similarity=0.297  Sum_probs=149.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~-------------------------------------   89 (284)
                      .++|...+.||+|+||.||++..       .+..||+|.+...                                     
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            35788899999999999999975       2347999987542                                     


Q ss_pred             ------CC-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 ------FP-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 ------~~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                            ++                 ...+...++.|++.||.|||   +.+|+|+||||+|||++.++.++++|||++..
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence                  11                 11456779999999999999   99999999999999999999999999999986


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      ......... .....++..|+|||.+....++.++|||||||++||+++ |..||.....    .....    .....+.
T Consensus       191 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~----~~~~~----~~~~~~~  261 (302)
T cd05055         191 IMNDSNYVV-KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV----DSKFY----KLIKEGY  261 (302)
T ss_pred             ccCCCceee-cCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc----hHHHH----HHHHcCC
Confidence            654332111 112346788999999988889999999999999999998 8888764320    00111    1111110


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                       ...              .+......+.+++.+||+.+|++|||+.|+++.|+++
T Consensus       262 -~~~--------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         262 -RMA--------------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             -cCC--------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence             000              0011123478999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.4e-33  Score=237.45  Aligned_cols=191  Identities=22%  Similarity=0.317  Sum_probs=142.7

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------C
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------F   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~   90 (284)
                      |...+.||+|+||+||+|.+  +++.||+|.+...                                            +
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            55567899999999999999  7889999988532                                            0


Q ss_pred             C-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 P-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +                 .......++.|++.||.|||   +.+|+||||||+||+++.++.++|+|||++.........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  158 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI  158 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc
Confidence            1                 01356779999999999999   999999999999999999999999999998765432221


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....|+..|+|||++.+..++.++|+|||||++|++++|..||....     .......+........  ...   
T Consensus       159 ----~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~-----~~~~~~~~~~~~~~~~--~~~---  224 (285)
T cd05632         159 ----RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK-----EKVKREEVDRRVLETE--EVY---  224 (285)
T ss_pred             ----cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhhhccc--ccc---
Confidence                12468999999999988889999999999999999999999986432     0101111111111110  000   


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                                 .......+.+|+..||+.+|++||+     +.+++.
T Consensus       225 -----------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         225 -----------SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             -----------CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence                       0112233678999999999999999     666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-34  Score=250.94  Aligned_cols=209  Identities=24%  Similarity=0.368  Sum_probs=156.0

Q ss_pred             ecHHHHHHHhcCCCCCCeeeecCCceEEEEEe---CC--cc-eEEEeecCC-----------------------------
Q 039895           45 FSADELKTATDDFDGGKVIMKCLFYKLYKGFL---QD--RP-ISVMKFEDT-----------------------------   89 (284)
Q Consensus        45 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~---~~--~~-vavK~~~~~-----------------------------   89 (284)
                      +....+.-...+-...++||+|.||.||+|.+   ++  .. ||||.....                             
T Consensus       147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF  226 (474)
T ss_pred             ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            33444444555666678999999999999999   22  23 899998852                             


Q ss_pred             ---------------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 ---------------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ---------------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                                     +|..                .+++.++.+.|.||+|||   +++++||||-.+|+|++.++.+||
T Consensus       227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKI  303 (474)
T KOG0194|consen  227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKI  303 (474)
T ss_pred             EEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEe
Confidence                           1111                678899999999999999   999999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||+++....-   ........-+..|+|||.+....|+.++|||||||++||+++ |..|+.+..        ..+..
T Consensus       304 SDFGLs~~~~~~---~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--------~~~v~  372 (474)
T KOG0194|consen  304 SDFGLSRAGSQY---VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--------NYEVK  372 (474)
T ss_pred             CccccccCCcce---eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--------HHHHH
Confidence            999998765411   111111234678999999999999999999999999999999 777776543        12211


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .....++ .+.              +.+...+..+..++..||..+|++||||.++.+.|+.+..
T Consensus       373 ~kI~~~~-~r~--------------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~  422 (474)
T KOG0194|consen  373 AKIVKNG-YRM--------------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK  422 (474)
T ss_pred             HHHHhcC-ccC--------------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence            1111111 111              1122334457789999999999999999999999998865

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.1e-34  Score=253.75  Aligned_cols=145  Identities=20%  Similarity=0.249  Sum_probs=117.8

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .|...+.||+|+||+||+|..  ++..||+|++...                                            
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            477788999999999999998  7889999998642                                            


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc--
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET--  152 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~--  152 (284)
                      +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.....  
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~  158 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK  158 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence            2211               334567899999999999   99999999999999999999999999999754321000  


Q ss_pred             ------------------------------------------cccCCCCcccCccccccccccCCCCCcchhHHHHHHHH
Q 039895          153 ------------------------------------------HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALL  190 (284)
Q Consensus       153 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il  190 (284)
                                                                .........||+.|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil  238 (382)
T cd05625         159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  238 (382)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence                                                      00001124699999999999988999999999999999


Q ss_pred             HHHHhCCCCCCCC
Q 039895          191 LELLTGKKISYSS  203 (284)
Q Consensus       191 ~elltg~~p~~~~  203 (284)
                      |||++|..||...
T Consensus       239 ~elltG~~Pf~~~  251 (382)
T cd05625         239 YEMLVGQPPFLAQ  251 (382)
T ss_pred             HHHHhCCCCCCCC
Confidence            9999999999653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=5.5e-34  Score=245.43  Aligned_cols=180  Identities=25%  Similarity=0.330  Sum_probs=136.7

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CCCc
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FPFS   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~~~   93 (284)
                      ++||+|+||.||+|..  ++..||+|++...                                             +|..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999  7889999998532                                             1111


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........   ...
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~~~  154 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE---TTS  154 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC---ccc
Confidence                           345568999999999999   99999999999999999999999999999875322211   112


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ... . +        
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~-~~~-~-~--------  215 (321)
T cd05603         155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------VSQMYDNILH-KPL-Q-L--------  215 (321)
T ss_pred             cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC--------HHHHHHHHhc-CCC-C-C--------
Confidence            2578999999999988889999999999999999999999986532        1111111111 100 0 0        


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIV  271 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  271 (284)
                            +......+.+++.+||+.+|.+||++.
T Consensus       216 ------~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         216 ------PGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             ------CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                  011223477999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.3e-33  Score=240.02  Aligned_cols=201  Identities=21%  Similarity=0.271  Sum_probs=149.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEeC---------CcceEEEeecCC------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQ---------DRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~------------------------------------   89 (284)
                      ++|...+.||+|+||.||++...         +..+|+|.+...                                    
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            56888899999999999999862         246999988643                                    


Q ss_pred             -------CCC-------------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -------FPF-------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -------~~~-------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                             +|.                               ....+.++.|++.||+|||   +.+++||||||+||+++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEc
Confidence                   111                               0234578999999999999   99999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~  210 (284)
                      .++.++|+|||++........... .....+++.|+|||++.+..++.++|||||||++|||++ |..||....      
T Consensus       175 ~~~~~kL~dfg~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------  247 (307)
T cd05098         175 EDNVMKIADFGLARDIHHIDYYKK-TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------  247 (307)
T ss_pred             CCCcEEECCCcccccccccchhhc-cccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------
Confidence            999999999999876643222111 111234578999999988889999999999999999998 777764321      


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                        ........ ......               +.+......+.+++.+||+.+|++|||+.+|++.|+++...
T Consensus       248 --~~~~~~~~-~~~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         248 --VEELFKLL-KEGHRM---------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             --HHHHHHHH-HcCCCC---------------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence              11111111 111100               01112234578999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=3.8e-33  Score=231.53  Aligned_cols=189  Identities=23%  Similarity=0.326  Sum_probs=142.4

Q ss_pred             CeeeecCCceEEEEEe-CCcceEEEeecCC------------------------------------------CC------
Q 039895           61 KVIMKCLFYKLYKGFL-QDRPISVMKFEDT------------------------------------------FP------   91 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------------------------------------------~~------   91 (284)
                      ++||+|+||.||+|.. ++..+|+|.+...                                          ++      
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            3689999999999998 7788999987644                                          11      


Q ss_pred             ----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcc
Q 039895           92 ----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        92 ----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                .....+.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++............  ...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~--~~~  155 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG--LKQ  155 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCC--CCC
Confidence                      11455788999999999999   999999999999999999999999999998765433222111  124


Q ss_pred             cCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCC
Q 039895          162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL  240 (284)
Q Consensus       162 gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
                      +++.|+|||++.+..++.++||||||+++|++++ |..||....        ...... .........            
T Consensus       156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~--------~~~~~~-~~~~~~~~~------------  214 (250)
T cd05085         156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT--------NQQARE-QVEKGYRMS------------  214 (250)
T ss_pred             CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC--------HHHHHH-HHHcCCCCC------------
Confidence            4678999999988889999999999999999998 888875432        111111 111111000            


Q ss_pred             CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                         .....+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       215 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         215 ---CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             ---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence               01112345889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=3.6e-33  Score=234.62  Aligned_cols=196  Identities=23%  Similarity=0.307  Sum_probs=146.0

Q ss_pred             CCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC------------------------------C-----------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT------------------------------F-----------   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~------------------------------~-----------   90 (284)
                      |...+.||+|+||.||+|.+     ++..||+|++...                              .           
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            45567899999999999986     3578999987643                              0           


Q ss_pred             --------C---------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           91 --------P---------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        91 --------~---------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                              +                     .......++.|++.||+|||   +.+|+||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence                    0                     00234678999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHH
Q 039895          142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      |+++........... ....+++.|++||.+....++.++|||||||++|++++ |..||....        ........
T Consensus       158 g~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~--------~~~~~~~~  228 (273)
T cd05074         158 GLSKKIYSGDYYRQG-CASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--------NSEIYNYL  228 (273)
T ss_pred             cccccccCCcceecC-CCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--------HHHHHHHH
Confidence            999876443322111 11345678999999988889999999999999999999 777765322        11111111


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      ........                ....+..+.+++.+||+.+|++|||+.+++..|+++
T Consensus       229 ~~~~~~~~----------------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         229 IKGNRLKQ----------------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HcCCcCCC----------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11111000                011233588999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.2e-33  Score=240.43  Aligned_cols=163  Identities=25%  Similarity=0.340  Sum_probs=116.9

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                      ..+.++.|++.||+|||   +.+|+|+||||+||+++.++.++|+|||++........... .....+++.|+|||++..
T Consensus       131 ~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  206 (296)
T cd05051         131 TLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRV-QGRAPLPIRWMAWESVLL  206 (296)
T ss_pred             HHHHHHHHHHHHHHHHH---HcCccccccchhceeecCCCceEEccccceeecccCcceee-cCcCCCCceecCHHHhhc
Confidence            35678999999999999   99999999999999999999999999999876644322211 122456788999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHh--CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          175 GDFSEKSDVYSFGALLLELLT--GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      ..++.++|||||||++||+++  +..|+....     .....................            +.....+..+
T Consensus       207 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l  269 (296)
T cd05051         207 GKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-----DQQVIENAGHFFRDDGRQIYL------------PRPPNCPKDI  269 (296)
T ss_pred             CCCCccchhhhhHHHHHHHHhcCCCCCCCCcC-----hHHHHHHHHhccccccccccC------------CCccCCCHHH
Confidence            889999999999999999998  555654221     111111111110000000000            0111223458


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          253 TELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      .+++.+||+.+|++|||+.||++.|+
T Consensus       270 ~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         270 YELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHhccChhcCCCHHHHHHHhc
Confidence            89999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-34  Score=252.32  Aligned_cols=186  Identities=21%  Similarity=0.315  Sum_probs=146.4

Q ss_pred             eeeecCCceEEEEEe--CCcceEEEeecCC----------------------------CCCc------------------
Q 039895           62 VIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------FPFS------------------   93 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------~~~~------------------   93 (284)
                      +||+|.||+||-|++  +...+|||.+...                            .|++                  
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            799999999999999  5667899988655                            1111                  


Q ss_pred             -------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-cCCcceeeccccccccCCCCccccCCCC
Q 039895           94 -------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        94 -------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                   .+.-.+-.||++||.|||   +..|||||||-+|+|++ -.|.+||+|||.++.+..-.   +.+.+
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin---P~TET  735 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN---PCTET  735 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCC---ccccc
Confidence                         445568899999999999   99999999999999997 57899999999998775322   22334


Q ss_pred             cccCccccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          160 VIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~--~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      +.||..|||||++..++  |+.++|||||||++.||.||++||.....      ....+.+-                +-
T Consensus       736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs------pqAAMFkV----------------Gm  793 (1226)
T KOG4279|consen  736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS------PQAAMFKV----------------GM  793 (1226)
T ss_pred             cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC------hhHhhhhh----------------cc
Confidence            88999999999998774  88999999999999999999999975431      01111110                01


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....+|.+.+...++..++.+|+.++|.+||++.+++.
T Consensus       794 yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  794 YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            11223557788888999999999999999999999874

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=5.2e-33  Score=233.43  Aligned_cols=200  Identities=25%  Similarity=0.348  Sum_probs=150.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-C----CcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-Q----DRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~----~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+ +    ...||+|.....                                        
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            3577788999999999999997 2    246899987643                                        


Q ss_pred             -CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|                ....++.++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++........
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence             11                11456778999999999999   99999999999999999999999999999877654432


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ....  ...++..|+|||.+....++.++||||||+++||+++ |..||....     ..   ...... ..+...    
T Consensus       163 ~~~~--~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~---~~~~~~-~~~~~~----  227 (270)
T cd05056         163 YKAS--KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK-----NN---DVIGRI-ENGERL----  227 (270)
T ss_pred             eecC--CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC-----HH---HHHHHH-HcCCcC----
Confidence            2111  1334578999999888889999999999999999986 998885432     11   111111 111100    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                 +.+..++..+.+++.+||..+|++|||+.+++..|+++..+
T Consensus       228 -----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         228 -----------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             -----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                       01112234588999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-34  Score=228.84  Aligned_cols=189  Identities=24%  Similarity=0.344  Sum_probs=141.7

Q ss_pred             CCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------CCCc------------------
Q 039895           60 GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------FPFS------------------   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------~~~~------------------   93 (284)
                      ...||.|+-|.||++.+  .|..+|||.+...                          .|..                  
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C  176 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTC  176 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHH
Confidence            45699999999999999  7899999998765                          1111                  


Q ss_pred             --------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           94 --------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        94 --------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                    ...-++...+++||.||-+  .++|+|||+||+|||+|..|++|+||||++-.+-++....    .
T Consensus       177 ~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht----r  250 (391)
T KOG0983|consen  177 AEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT----R  250 (391)
T ss_pred             HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccc----c
Confidence                          1111456778899999997  7899999999999999999999999999997775544332    2


Q ss_pred             cccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          160 VIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ..|.+.|||||.+.-   ..|+.++||||||+.++||.||+.||....    ........+..   +      ..|.+.+
T Consensus       251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~----tdFe~ltkvln---~------ePP~L~~  317 (391)
T KOG0983|consen  251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK----TDFEVLTKVLN---E------EPPLLPG  317 (391)
T ss_pred             ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC----ccHHHHHHHHh---c------CCCCCCc
Confidence            568999999998764   368999999999999999999999997533    11111111111   1      1122222


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .        ...++.+.+++..||..|+.+||...++++
T Consensus       318 ~--------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  318 H--------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             c--------cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            2        223445889999999999999999998875

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=3.8e-33  Score=233.83  Aligned_cols=194  Identities=21%  Similarity=0.287  Sum_probs=143.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      .+|...+.||+|+||.||+|..  ++..||+|++...                                           
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4788899999999999999998  7889999987421                                           


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           ++.               ......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.....
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence                 000               0345678999999999999   99999999999999999999999999999876543


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ............++..|+|||.+.+..++.++|||||||++||+++|..||....        ....+........    
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~--------~~~~~~~~~~~~~----  226 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE--------AMAAIFKIATQPT----  226 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc--------hHHHHHHHhcCCC----
Confidence            2211111122457899999999988889999999999999999999999985321        1111111111110    


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       .+.+          +......+.+++ +||..+|++||++.||++
T Consensus       227 -~~~~----------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         227 -NPQL----------PSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             -CCCC----------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence             0110          112223355666 788899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.7e-33  Score=263.44  Aligned_cols=203  Identities=22%  Similarity=0.335  Sum_probs=149.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...++||+|+||.||+|..  +|+.||+|++...                                           
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5688889999999999999998  6899999998642                                           


Q ss_pred             -CCCc--------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccc
Q 039895           90 -FPFS--------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFT  142 (284)
Q Consensus        90 -~~~~--------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg  142 (284)
                       +|..                          ...+.++.||+.||+|||   +.+|+||||||+|||++.++.++|+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence             1110                          123678899999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCc---------------cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 039895          143 LSLSIPEGET---------------HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD  207 (284)
Q Consensus       143 ~a~~~~~~~~---------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~  207 (284)
                      +++.......               .........||+.|+|||++.+..++.++|||||||++|||+||..||....   
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~---  235 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK---  235 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc---
Confidence            9986621110               0001112569999999999999999999999999999999999999986422   


Q ss_pred             CccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHHHHh
Q 039895          208 GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-TIVQVAKQLRQIYQ  282 (284)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~ev~~~L~~l~~  282 (284)
                      .  ....  ....        ..++...       ......+..+.+++.+||+.||++|| +++++++.|+...+
T Consensus       236 ~--~ki~--~~~~--------i~~P~~~-------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        236 G--RKIS--YRDV--------ILSPIEV-------APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             h--hhhh--hhhh--------ccChhhc-------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            0  0000  0000        0000000       00112234477899999999999996 66778888887654

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=5e-33  Score=231.44  Aligned_cols=191  Identities=24%  Similarity=0.347  Sum_probs=147.0

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..+.||+|++|.||+|..  ++..|++|.+...                                           +
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            467778999999999999998  7899999987532                                           1


Q ss_pred             CC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 PF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +.                 ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~  157 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF  157 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence            10                 0345678999999999999   999999999999999999999999999998876543322


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .   ....|++.|+|||++.+..++.++|||||||++++|++|..||....        ......... .+.....    
T Consensus       158 ~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~----  221 (256)
T cd08529         158 A---NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--------QGALILKII-RGVFPPV----  221 (256)
T ss_pred             h---hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-cCCCCCC----
Confidence            1   12468899999999998889999999999999999999999986432        111111111 1111110    


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                 .......+.+++.+||+.+|++||++.++++.
T Consensus       222 -----------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         222 -----------SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             -----------ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence                       11233448899999999999999999999763

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.3e-34  Score=252.98  Aligned_cols=197  Identities=18%  Similarity=0.210  Sum_probs=141.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..  +++.||+|++...                                           
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            3678889999999999999998  7899999998532                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc-
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET-  152 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~-  152 (284)
                       +|..               .....++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++..+..... 
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence             2211               334567899999999999   99999999999999999999999999999753311000 


Q ss_pred             ---------------------------------------cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHH
Q 039895          153 ---------------------------------------HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLEL  193 (284)
Q Consensus       153 ---------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~el  193 (284)
                                                             .........||+.|+|||++.+..++.++|||||||++|||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel  237 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  237 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence                                                   00001125799999999999988999999999999999999


Q ss_pred             HhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC---CH
Q 039895          194 LTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP---TI  270 (284)
Q Consensus       194 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp---s~  270 (284)
                      ++|..||....     .   ...............             .+........+.+++.+|+ .+|.+|+   |+
T Consensus       238 l~G~~Pf~~~~-----~---~~~~~~i~~~~~~~~-------------~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~  295 (376)
T cd05598         238 LVGQPPFLADT-----P---AETQLKVINWETTLH-------------IPSQAKLSREASDLILRLC-CGAEDRLGKNGA  295 (376)
T ss_pred             hhCCCCCCCCC-----H---HHHHHHHhccCcccc-------------CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCH
Confidence            99999996533     1   111111110000000             0001112233667888766 5999999   88


Q ss_pred             HHHHHH
Q 039895          271 VQVAKQ  276 (284)
Q Consensus       271 ~ev~~~  276 (284)
                      .++++.
T Consensus       296 ~ell~h  301 (376)
T cd05598         296 DEIKAH  301 (376)
T ss_pred             HHHhCC
Confidence            888753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=4.2e-33  Score=237.24  Aligned_cols=194  Identities=21%  Similarity=0.316  Sum_probs=146.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ..|...+.||+|+||.||+|..  ++..||+|.+...                                         ++
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            3566778899999999999997  7889999988643                                         11


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++.........   .
T Consensus       100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~---~  173 (296)
T cd06654         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---R  173 (296)
T ss_pred             CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc---c
Confidence                          11456789999999999999   999999999999999999999999999998765432211   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....|++.|+|||.+.+..++.++|||||||++|+|++|..||.....       ...+.. ..... ....        
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-------~~~~~~-~~~~~-~~~~--------  236 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYL-IATNG-TPEL--------  236 (296)
T ss_pred             CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-------HHhHHH-HhcCC-CCCC--------
Confidence            124688999999999888889999999999999999999999864320       011110 10000 0000        


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                           +.+......+.+++.+||..+|++|||+.++++.
T Consensus       237 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         237 -----QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             -----CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence                 0011223447899999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-33  Score=242.00  Aligned_cols=215  Identities=16%  Similarity=0.207  Sum_probs=148.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|..||+|.+...                                          
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46788899999999999999998  7899999987532                                          


Q ss_pred             -----CC-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 -----FP-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 -----~~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                           ++             .......++.|++.||.|||   +.+|+||||||+||+++.++.++|+|||++.......
T Consensus        84 ~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  160 (336)
T cd07849          84 YIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH  160 (336)
T ss_pred             EEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence                 00             00345668999999999999   9999999999999999999999999999987765433


Q ss_pred             ccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFK  227 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  227 (284)
                      ..........||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.....     ..............   .+.
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~  235 (336)
T cd07849         161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-----LHQLNLILGVLGTPSQEDLN  235 (336)
T ss_pred             cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCCHHHHH
Confidence            22222223568999999998654 4688999999999999999999999864320     11111111111000   000


Q ss_pred             cccccc-------ccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          228 EIVDPA-------IVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       228 ~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .+.+..       ........+. ........+.+++.+||+.+|++|||+.|+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000000       0000000000 001223458899999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.7e-33  Score=236.65  Aligned_cols=201  Identities=19%  Similarity=0.314  Sum_probs=149.1

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~------------------------------------   89 (284)
                      ..+.|+..+.||+|+||.||+|..       .+..||+|.+...                                    
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            456788889999999999999975       2447999987533                                    


Q ss_pred             ------CCCc-------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 ------FPFS-------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ------~~~~-------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                            +|..                         .....++.|++.||.|||   +++|+||||||+|||++.++.++|
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence                  1110                         134568999999999999   999999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||+++.......... .....++..|+|||.+.+..++.++|||||||++||+++ |..||....        .....
T Consensus       161 ~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~--------~~~~~  231 (288)
T cd05061         161 GDFGMTRDIYETDYYRK-GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--------NEQVL  231 (288)
T ss_pred             CcCCccccccccccccc-cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH
Confidence            99999876644332211 111345778999999988889999999999999999998 677765322        11111


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      .... .+....               .+..++..+.+++.+||+.+|++|||+.++++.|++..
T Consensus       232 ~~~~-~~~~~~---------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         232 KFVM-DGGYLD---------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHHH-cCCCCC---------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            1111 111110               01122345889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-34  Score=247.39  Aligned_cols=183  Identities=21%  Similarity=0.257  Sum_probs=135.5

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------------CCCc
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------------FPFS   93 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------------~~~~   93 (284)
                      ||+|+||+||+|..  ++..||+|++...                                               +|..
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999998  7899999998532                                               1110


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .....++.||+.||+|||   +.+|+||||||+|||++.++.++|+|||++.........   ..
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~---~~  154 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT---TN  154 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC---cc
Confidence                           345678999999999999   999999999999999999999999999998754322211   12


Q ss_pred             CcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          159 RVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ...||+.|+|||++.+. .++.++|||||||++|+|++|..||....        ........ ..+.. .+..      
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~--------~~~~~~~i-~~~~~-~~~~------  218 (330)
T cd05586         155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED--------TQQMYRNI-AFGKV-RFPK------  218 (330)
T ss_pred             CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC--------HHHHHHHH-HcCCC-CCCC------
Confidence            25799999999998754 47899999999999999999999986532        11111111 11110 0000      


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCC----CHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRP----TIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp----s~~ev~~  275 (284)
                              ......+.+++.+||+.||++||    ++.++++
T Consensus       219 --------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         219 --------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             --------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence                    01123467899999999999998    4555544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=4.1e-33  Score=235.52  Aligned_cols=192  Identities=26%  Similarity=0.342  Sum_probs=143.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF------------------------------------------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------------------------------------------   90 (284)
                      ++|+..+.||+|+||.||++..  +|..||+|.+....                                          
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            4678888999999999999998  78999999886430                                          


Q ss_pred             -------------------CCchhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           91 -------------------PFSVSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        91 -------------------~~~~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                                         +.+.....++.|++.||.|||   +. +++||||||+||+++.++.+||+|||++..+...
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence                               011345689999999999999   76 9999999999999999999999999998766432


Q ss_pred             CccccCCCCcccCccccccccccC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTT----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ...    ....|+..|+|||++.+    ..++.++|+|||||++|+|++|..||....      ..... ...... ...
T Consensus       158 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~-~~~~~~-~~~  225 (283)
T cd06617         158 VAK----TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK------TPFQQ-LKQVVE-EPS  225 (283)
T ss_pred             ccc----ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc------cCHHH-HHHHHh-cCC
Confidence            211    12457889999998764    456889999999999999999999985321      11111 111111 000


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....              ....+..+.+++.+||..+|++|||+.+++.
T Consensus       226 ~~~~--------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         226 PQLP--------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CCCC--------------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000              0112344789999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.4e-33  Score=239.58  Aligned_cols=198  Identities=22%  Similarity=0.278  Sum_probs=146.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc--ceEEEeecCC-----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR--PISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~--~vavK~~~~~-----------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|.+  ++.  .+|+|.+...                                         
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            5778889999999999999997  454  4577776532                                         


Q ss_pred             --CCC-------------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 --FPF-------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 --~~~-------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                        ++.                               ....+.++.|++.||+|||   +.+++||||||+|||++.++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcE
Confidence              110                               1235678999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~  215 (284)
                      ||+|||++........    .....++..|+|||++.+..++.++|||||||++||++| |..||....        ...
T Consensus       164 kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~  231 (303)
T cd05088         164 KIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAE  231 (303)
T ss_pred             EeCccccCcccchhhh----cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC--------hHH
Confidence            9999999864321111    111234667999999988889999999999999999998 888885432        111


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..... .......               .....+..+.+|+.+||+.+|++||++.+++..|+.+.+.
T Consensus       232 ~~~~~-~~~~~~~---------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         232 LYEKL-PQGYRLE---------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             HHHHH-hcCCcCC---------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            11111 1100000               0111223478999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-33  Score=235.70  Aligned_cols=196  Identities=22%  Similarity=0.327  Sum_probs=146.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~--------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|...       +..||+|.+...                                      
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            56777889999999999999983       257999997644                                      


Q ss_pred             ----CCCc-------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeec
Q 039895           90 ----FPFS-------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        90 ----~~~~-------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                          ++..                         ...+.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~d  162 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGD  162 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECC
Confidence                1110                         135678999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHH
Q 039895          141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKK  219 (284)
Q Consensus       141 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  219 (284)
                      ||+++.......... .....++..|+|||.+....++.++|||||||++||+++ |..||....        .......
T Consensus       163 fg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------~~~~~~~  233 (277)
T cd05032         163 FGMTRDIYETDYYRK-GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--------NEEVLKF  233 (277)
T ss_pred             cccchhhccCccccc-CCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC--------HHHHHHH
Confidence            999876644332211 112456789999999988889999999999999999998 887775322        1111111


Q ss_pred             HhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      . ........               +...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       234 ~-~~~~~~~~---------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         234 V-IDGGHLDL---------------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             H-hcCCCCCC---------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            1 11111110               1112345889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=8.3e-34  Score=259.32  Aligned_cols=210  Identities=20%  Similarity=0.240  Sum_probs=138.9

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--C----CcceEEEeecCC-------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--Q----DRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~----~~~vavK~~~~~-------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|.+  +    +..||+|++...                                     
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE  209 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence            567899999999999999999999  5    689999986531                                     


Q ss_pred             ------CCCc-----------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcE
Q 039895           90 ------FPFS-----------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTI  128 (284)
Q Consensus        90 ------~~~~-----------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NI  128 (284)
                            |+..                                   .....++.||+.||.|||   +.+|+||||||+||
T Consensus       210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLKP~NI  286 (566)
T PLN03225        210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVKPQNI  286 (566)
T ss_pred             eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCCHHHE
Confidence                  0000                                   012358999999999999   99999999999999


Q ss_pred             EEec-CCcceeeccccccccCCCCccccCCCCcccCccccccccccCC----------------------CCCcchhHHH
Q 039895          129 VLQE-ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG----------------------DFSEKSDVYS  185 (284)
Q Consensus       129 Ll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~DvwS  185 (284)
                      |++. ++.+||+|||+++.+.........  ...+++.|+|||.+...                      .++.++||||
T Consensus       287 Ll~~~~~~~KL~DFGlA~~l~~~~~~~~~--~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS  364 (566)
T PLN03225        287 IFSEGSGSFKIIDLGAAADLRVGINYIPK--EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS  364 (566)
T ss_pred             EEeCCCCcEEEEeCCCccccccccccCCc--ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence            9985 579999999999876543332222  26789999999965322                      1334679999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC----cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhc
Q 039895          186 FGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE----SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLS  261 (284)
Q Consensus       186 ~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  261 (284)
                      |||++|||+++..++...         ...+.......+    .+.....+....+....+...........+|+.+||+
T Consensus       365 lGviL~el~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~  435 (566)
T PLN03225        365 AGLIFLQMAFPNLRSDSN---------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR  435 (566)
T ss_pred             HHHHHHHHHhCcCCCchH---------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence            999999999876553211         111111111000    0111111110000000000000111235689999999


Q ss_pred             CCCCCCCCHHHHHHH
Q 039895          262 ESEGDRPTIVQVAKQ  276 (284)
Q Consensus       262 ~~p~~Rps~~ev~~~  276 (284)
                      .||++|||+.|++++
T Consensus       436 ~dP~kR~ta~e~L~H  450 (566)
T PLN03225        436 FKGRQRISAKAALAH  450 (566)
T ss_pred             CCcccCCCHHHHhCC
Confidence            999999999999863

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=6e-33  Score=234.71  Aligned_cols=209  Identities=13%  Similarity=0.144  Sum_probs=144.0

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------CC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FP   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~   91 (284)
                      |...+.||+|+||.||+|..  +|..||+|.+...                                           +|
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            66678899999999999999  7899999988532                                           11


Q ss_pred             C---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 F---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      .               ......++.||+.||.|||   ..+|+|+||||+||+++.++.++|+|||++.........   
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~---  155 (284)
T cd07839          82 DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC---  155 (284)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC---
Confidence            1               1455789999999999999   999999999999999999999999999998765432211   


Q ss_pred             CCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc---c---ccc
Q 039895          157 SNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES---F---KEI  229 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~  229 (284)
                      .....+++.|+|||++.+. .++.++|||||||++|+|++|..|+.....   ....+ ..+........   +   ...
T Consensus       156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07839         156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND---VDDQL-KRIFRLLGTPTEESWPGVSKL  231 (284)
T ss_pred             cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC---HHHHH-HHHHHHhCCCChHHhHHhhhc
Confidence            1124578899999988764 478999999999999999999998754321   11111 11111000000   0   000


Q ss_pred             ccccccCCCC--CC-ChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEG--LM-WPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+........  .. ..........+.+++.+||+.||.+|||+.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            0000000000  00 0001123445789999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.5e-33  Score=232.06  Aligned_cols=197  Identities=23%  Similarity=0.349  Sum_probs=149.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CC-
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FP-   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~-   91 (284)
                      -++|...+.||+|+||.||+|.. ++..||+|.+...                                        ++ 
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   84 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS   84 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence            36788889999999999999998 6678999988754                                        00 


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+........
T Consensus        85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  161 (261)
T cd05034          85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR  161 (261)
T ss_pred             CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence                            01345789999999999999   99999999999999999999999999999877654221111


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      .  ...++..|+|||.+.+..++.++||||||++++++++ |..||....        ...........  ...      
T Consensus       162 ~--~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~~~~~~~~~~--~~~------  223 (261)
T cd05034         162 E--GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--------NREVLEQVERG--YRM------  223 (261)
T ss_pred             h--ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcC--CCC------
Confidence            1  1334678999999988889999999999999999998 888875321        11111111110  000      


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                              +.+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       224 --------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         224 --------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             --------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence                    0011123457899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.9e-34  Score=245.95  Aligned_cols=194  Identities=23%  Similarity=0.293  Sum_probs=144.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------CCCc--------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------FPFS--------------------------------   93 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------~~~~--------------------------------   93 (284)
                      .|+..+.||.||.+.||++.. +.+.+|+|++...         ||.+                                
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~  441 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC  441 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec
Confidence            467778899999999999999 6677888876433         1111                                


Q ss_pred             ------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           94 ------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        94 ------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                        ..+..+..||+.++.++|   ..||||.||||.|+|+- .|.+||+|||+|..+....+...
T Consensus       442 Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~  517 (677)
T KOG0596|consen  442 GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIV  517 (677)
T ss_pred             ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCcccccee
Confidence                              356678999999999999   99999999999999986 57899999999998876655443


Q ss_pred             CCCCcccCccccccccccCC-----------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-----------DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE  224 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
                      .. ..+||+.||+||.+...           ..+.++||||+|||||+|+.|+.||..          +......     
T Consensus       518 kd-sQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~----------~~n~~aK-----  581 (677)
T KOG0596|consen  518 KD-SQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ----------IINQIAK-----  581 (677)
T ss_pred             ec-cccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH----------HHHHHHH-----
Confidence            32 37899999999987532           256899999999999999999999842          2222221     


Q ss_pred             cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       +..+.+|...-+    +|....-. ++.++|..||.+||.+|||+.++++
T Consensus       582 -l~aI~~P~~~Ie----fp~~~~~~-~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  582 -LHAITDPNHEIE----FPDIPEND-ELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             -HHhhcCCCcccc----ccCCCCch-HHHHHHHHHHhcCcccCCCcHHHhc
Confidence             223333322111    11111111 1789999999999999999999985

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.6e-33  Score=234.93  Aligned_cols=193  Identities=30%  Similarity=0.404  Sum_probs=143.7

Q ss_pred             CCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------CCC-
Q 039895           59 GGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FPF-   92 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~~-   92 (284)
                      ..+.||+|+||+||++..  ++..+|+|++...                                           +|. 
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~   82 (260)
T PF00069_consen    3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG   82 (260)
T ss_dssp             EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred             EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence            456899999999999999  6668999999766                                           000 


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    ...+..++.|++.||.+||   +.+|+|+||||+||+++.++.++|+|||.+........   ...
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~---~~~  156 (260)
T PF00069_consen   83 GSLQDYLQKNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE---NFN  156 (260)
T ss_dssp             EBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS---EBS
T ss_pred             ccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc---ccc
Confidence                          0566789999999999999   89999999999999999999999999999876421111   111


Q ss_pred             CcccCcccccccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          159 RVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~-~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ...++..|+|||++. +..++.++||||+|+++|+|++|..|+....     .....................       
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------  224 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN-----SDDQLEIIEKILKRPLPSSSQ-------  224 (260)
T ss_dssp             SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS-----HHHHHHHHHHHHHTHHHHHTT-------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccc-----chhhhhhhhhccccccccccc-------
Confidence            256899999999988 7789999999999999999999999987531     011111111111100000000       


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            ........+.+++..||+.||++|||+.++++
T Consensus       225 ------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  225 ------QSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             ------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             ------ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  00001145889999999999999999999975

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=3.8e-33  Score=232.29  Aligned_cols=191  Identities=19%  Similarity=0.259  Sum_probs=146.0

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~   91 (284)
                      +|...+.||+|+||.||++..  ++..+|+|.+...                                          ++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            366678999999999999998  7889999987532                                          11


Q ss_pred             -----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           92 -----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        92 -----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                       .+...+.++.|++.||.|||   +.+|+|+||||+||+++.++.++++|||.+......... 
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-  156 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY-  156 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccccc-
Confidence                             01345678999999999999   999999999999999999999999999998766432221 


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                        .....|++.|+|||++.+..++.++|+||||+++|+|++|..||....        ......... .+.....     
T Consensus       157 --~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~-----  220 (255)
T cd08219         157 --ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS--------WKNLILKVC-QGSYKPL-----  220 (255)
T ss_pred             --cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC--------HHHHHHHHh-cCCCCCC-----
Confidence              112568899999999988889999999999999999999999986432        111111111 1111110     


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                +......+.+++.+||+.+|++|||+.+++..
T Consensus       221 ----------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         221 ----------PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ----------CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                      11122347899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=3.9e-33  Score=235.66  Aligned_cols=202  Identities=23%  Similarity=0.301  Sum_probs=151.3

Q ss_pred             ecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------
Q 039895           45 FSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------   89 (284)
Q Consensus        45 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------   89 (284)
                      .++.++..+.+.|+..+.||.|+||.||+|..  ++..+|+|++...                                 
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            46777777888999999999999999999999  7889999987533                                 


Q ss_pred             --------------CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 --------------FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 --------------~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                                    +|..                 .....++.|++.||.|||   +.+|+|+||+|+||+++.++.++|
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence                          1100                 235678899999999999   999999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      +|||++........   ......|++.|+|||.+.     ...++.++|||||||++|||++|..||....     ..  
T Consensus       163 ~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~-----~~--  232 (282)
T cd06636         163 VDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH-----PM--  232 (282)
T ss_pred             eeCcchhhhhcccc---CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC-----HH--
Confidence            99999876543211   112256899999999875     3457889999999999999999999986432     00  


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .. .... .....     +..         .....+..+.+++.+||+.||.+|||+.|+++
T Consensus       233 ~~-~~~~-~~~~~-----~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         233 RA-LFLI-PRNPP-----PKL---------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             hh-hhhH-hhCCC-----CCC---------cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            00 0000 00000     000         01122345889999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=2.2e-33  Score=239.52  Aligned_cols=210  Identities=17%  Similarity=0.220  Sum_probs=145.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      +.|...+.||+|+||.||+|..  ++..||+|.+...                                          +
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            4577788999999999999998  6889999988632                                          1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      +.               ......++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++.........  
T Consensus        86 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--  160 (301)
T cd07873          86 LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT--  160 (301)
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc--
Confidence            10               1345668899999999999   999999999999999999999999999998765332211  


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh---cCccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE---NESFKEIVD  231 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  231 (284)
                       .....+++.|+|||++.+. .++.++|||||||++|+|++|..||....     .......+.....   ...+..+.+
T Consensus       161 -~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  234 (301)
T cd07873         161 -YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST-----VEEQLHFIFRILGTPTEETWPGILS  234 (301)
T ss_pred             -ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHcCCCChhhchhhhc
Confidence             1114578899999987654 57889999999999999999999986432     1111111111110   011111111


Q ss_pred             ccccCCCC-CCC------hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEG-LMW------PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~-~~~------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ........ ...      .........+.+|+.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            00000000 000      001122345789999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=4.8e-33  Score=232.45  Aligned_cols=197  Identities=21%  Similarity=0.325  Sum_probs=148.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPF--   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~--   92 (284)
                      .+|...+.||+|+||.||++.. .+..+|+|.+...                                       ++.  
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~   85 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKG   85 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCC
Confidence            5677889999999999999998 6678999988653                                       110  


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ...++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+...........  
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~--  160 (260)
T cd05073          86 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR--  160 (260)
T ss_pred             cHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc--
Confidence                           0345678999999999999   89999999999999999999999999999876654322211  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....++..|+|||++....++.++|+|||||+++++++ |..||....     .......    ...+...         
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-----~~~~~~~----~~~~~~~---------  222 (260)
T cd05073         161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----NPEVIRA----LERGYRM---------  222 (260)
T ss_pred             cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH----HhCCCCC---------
Confidence            11345678999999988889999999999999999999 888875322     1111111    1111000         


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                            +.....+..+.+++.+||+.+|++||++.++...|+.+
T Consensus       223 ------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~  260 (260)
T cd05073         223 ------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  260 (260)
T ss_pred             ------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence                  00112233478999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=6.8e-33  Score=232.45  Aligned_cols=199  Identities=20%  Similarity=0.310  Sum_probs=148.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CC---cceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QD---RPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  ++   ..+|+|.+...                                        
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4677789999999999999987  33   36999987643                                        


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.|++.||+|||   +.+++|+||||+|||++.++.++++|||++.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence              11                01456789999999999999   9999999999999999999999999999998765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ..........++..|+|||++.+..++.++||||||+++||+++ |..||....     ......   ........    
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~-----~~~~~~---~~~~~~~~----  228 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS-----NQDVIK---AIEEGYRL----  228 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC-----HHHHHH---HHhCCCcC----
Confidence            22221111234568999999988889999999999999999887 998875432     111111   11110000    


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                                  +.....+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       229 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         229 ------------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             ------------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence                        11112234578999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=6.6e-33  Score=235.03  Aligned_cols=198  Identities=21%  Similarity=0.323  Sum_probs=148.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~-------------------------------------   89 (284)
                      .++|+..+.||+|+||.||++..       ++..||+|++...                                     
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            46788899999999999999986       3578999987643                                     


Q ss_pred             -----CCCc-------------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCc
Q 039895           90 -----FPFS-------------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTT  127 (284)
Q Consensus        90 -----~~~~-------------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~N  127 (284)
                           +|..                                     ...+.++.|++.||.|||   ..+++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence                 1110                                     124679999999999999   9999999999999


Q ss_pred             EEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 039895          128 IVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFD  206 (284)
Q Consensus       128 ILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~  206 (284)
                      |+++.++.++|+|||++........... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||....  
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~--  237 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKA-SENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA--  237 (288)
T ss_pred             eEecCCCceEECccccceecccCccccc-cCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--
Confidence            9999999999999999876543322111 111334678999999988889999999999999999998 777775422  


Q ss_pred             CCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          207 DGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                            ....... ...+....               .+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus       238 ------~~~~~~~-~~~~~~~~---------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         238 ------HEEVIYY-VRDGNVLS---------------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             ------HHHHHHH-HhcCCCCC---------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence                  1121211 11111110               011223458899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-33  Score=239.34  Aligned_cols=164  Identities=24%  Similarity=0.339  Sum_probs=116.3

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                      ..+.++.|++.||+|||   +.+++|+||||+||+++.++.+||+|||++.......... ......++..|+|||++..
T Consensus       130 ~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  205 (295)
T cd05097         130 NLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYR-IQGRAVLPIRWMAWESILL  205 (295)
T ss_pred             HHHHHHHHHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecccccccccccCccee-ccCcCcCceeecChhhhcc
Confidence            34678999999999999   9999999999999999999999999999987664332211 1112345778999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHh--CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          175 GDFSEKSDVYSFGALLLELLT--GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      ..++.++|||||||++++|++  +..||....     .....................      .      .....+..+
T Consensus       206 ~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~------~------~~~~~~~~l  268 (295)
T cd05097         206 GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS-----DEQVIENTGEFFRNQGRQIYL------S------QTPLCPSPV  268 (295)
T ss_pred             CCcCchhhHHHHHHHHHHHHHcCCCCCCcccC-----hHHHHHHHHHhhhhccccccC------C------CCCCCCHHH
Confidence            889999999999999999998  445554321     111111111111110000000      0      011122358


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          253 TELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .+|+.+||+.+|++|||+.+|++.|++
T Consensus       269 ~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         269 FKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=3.2e-34  Score=250.70  Aligned_cols=146  Identities=23%  Similarity=0.301  Sum_probs=120.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||.||++..  ++..||+|++...                                           
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4678889999999999999998  7889999998532                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++..+......
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~  157 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT  157 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence             1111               445678999999999999   999999999999999999999999999998755321100


Q ss_pred             --------------------------------ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039895          154 --------------------------------INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY  201 (284)
Q Consensus       154 --------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~  201 (284)
                                                      ........||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~  237 (360)
T cd05627         158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (360)
T ss_pred             ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence                                            000112579999999999999999999999999999999999999996


Q ss_pred             CC
Q 039895          202 SS  203 (284)
Q Consensus       202 ~~  203 (284)
                      ..
T Consensus       238 ~~  239 (360)
T cd05627         238 SE  239 (360)
T ss_pred             CC
Confidence            53

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-32  Score=232.30  Aligned_cols=201  Identities=20%  Similarity=0.317  Sum_probs=150.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc----ceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR----PISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~---------------------------------------   89 (284)
                      .+|...+.||+|+||.||+|.+  +|.    .+|+|.+...                                       
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            4566778999999999999997  443    5899987644                                       


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.|++.||+|||   +.+++|+||||+||+++.++.+||+|||+++......
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence              11                11456789999999999999   8999999999999999999999999999998765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ...... ...++..|+|||.+....++.++||||||+++||+++ |..||....        ..............    
T Consensus       164 ~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~~~----  230 (279)
T cd05057         164 KEYHAE-GGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP--------AVEIPDLLEKGERL----  230 (279)
T ss_pred             cceecC-CCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHHhCCCCC----
Confidence            221111 1234568999999988889999999999999999999 998886432        11111111111100    


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                  +.+..+...+.+++.+||..+|+.|||+.++++.|..+...
T Consensus       231 ------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         231 ------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             ------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence                        00111223477999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=4e-33  Score=235.80  Aligned_cols=210  Identities=19%  Similarity=0.189  Sum_probs=142.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..+.||+|++|.||+|..  ++..||+|++...                                           +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            466778999999999999998  7889999987532                                           1


Q ss_pred             CC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 PF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      |.                 ......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.........
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  157 (285)
T cd07861          81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV  157 (285)
T ss_pred             CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc
Confidence            11                 1345668999999999999   999999999999999999999999999998765432211


Q ss_pred             ccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc--Ccccc--
Q 039895          154 INDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN--ESFKE--  228 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--  228 (284)
                         .....+++.|+|||++.+. .++.++|||||||++++|++|+.||....    ...............  ..+..  
T Consensus       158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
T cd07861         158 ---YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDS----EIDQLFRIFRILGTPTEDVWPGVT  230 (285)
T ss_pred             ---ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHHHhCCCChhhhhcch
Confidence               1124578899999987654 57899999999999999999999886432    000111111100000  00000  


Q ss_pred             -ccc--ccccCCCCCC-ChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          229 -IVD--PAIVGEEGLM-WPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       229 -~~~--~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ..+  +......... .........++.+++.+||+.||++|||+.+|+.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence             000  0000000000 0000112345779999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=7.8e-33  Score=232.13  Aligned_cols=199  Identities=19%  Similarity=0.267  Sum_probs=145.6

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------   89 (284)
                      |+..+++++.....||+|+||.||+|.+  ++..||+|.+...                                     
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            3456778888889999999999999997  6778999987643                                     


Q ss_pred             ----CC------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccc
Q 039895           90 ----FP------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLS  146 (284)
Q Consensus        90 ----~~------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~  146 (284)
                          ++                  .......++.|++.||.|||   ..+|+|+||||+||+++. ++.++|+|||++..
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence                11                  11334567889999999999   999999999999999986 67899999999876


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE  224 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
                      .......   .....|++.|+|||++....  ++.++||||||+++|++++|..||.....     .....+....  ..
T Consensus       159 ~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~-----~~~~~~~~~~--~~  228 (268)
T cd06624         159 LAGINPC---TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE-----PQAAMFKVGM--FK  228 (268)
T ss_pred             cccCCCc---cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC-----hhhhHhhhhh--hc
Confidence            5432211   11245789999999986543  78899999999999999999999853220     0000000000  00


Q ss_pred             cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .     .+          ..+......+.+++.+||+.+|++|||+.|++.
T Consensus       229 ~-----~~----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         229 I-----HP----------EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             c-----CC----------CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            0     00          001123344789999999999999999999975

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.1e-33  Score=237.26  Aligned_cols=206  Identities=21%  Similarity=0.238  Sum_probs=149.9

Q ss_pred             CCCCCCeeeecCCceEEEEEeC------CcceEEEeecCCC---------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFLQ------DRPISVMKFEDTF---------------------------------------   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~~------~~~vavK~~~~~~---------------------------------------   90 (284)
                      .|...+.||+|+||.||+|.++      +..+|||++....                                       
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4556688999999999999872      6789999886441                                       


Q ss_pred             -----CC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           91 -----PF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        91 -----~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           |.                ......++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||.+.....
T Consensus        85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence                 10                0345779999999999999   99999999999999999999999999999987763


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc-------cccHHHHHHHHhh
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE-------DYRLQDLVKKYIE  222 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~~~  222 (284)
                      ............++..|+|||.+.+..++.++||||||++++||++|..|+.........       ......+. ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  240 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL-ELLK  240 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH-HHHH
Confidence            322211111134566799999998888999999999999999999999887543210000       00011111 1110


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      ...               ..+....++..+.+++.+||+.+|++|||+.||+++|+++
T Consensus       241 ~~~---------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         241 EGE---------------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cCC---------------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            000               0111223335588999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=9.5e-33  Score=237.00  Aligned_cols=159  Identities=24%  Similarity=0.346  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      .+.++.|++.||.|||   +.+++|+||||+|||++.++.+||+|||+++............ ...++..|+|||++.+.
T Consensus       136 ~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~  211 (314)
T cd05099         136 LVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS-NGRLPVKWMAPEALFDR  211 (314)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEccccccccccccccccccc-cCCCCccccCHHHHccC
Confidence            4568899999999999   9999999999999999999999999999998765332211111 12345679999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++|||||||++|++++ |..||....        ........ .......               .+..++..+.+
T Consensus       212 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~--------~~~~~~~~-~~~~~~~---------------~~~~~~~~l~~  267 (314)
T cd05099         212 VYTHQSDVWSFGILMWEIFTLGGSPYPGIP--------VEELFKLL-REGHRMD---------------KPSNCTHELYM  267 (314)
T ss_pred             CcCccchhhHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-HcCCCCC---------------CCCCCCHHHHH
Confidence            89999999999999999999 777775322        11111111 1111000               01122334779


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      ++.+||+.+|++|||+.++++.|+++..
T Consensus       268 li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         268 LMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=8e-33  Score=233.65  Aligned_cols=197  Identities=21%  Similarity=0.275  Sum_probs=145.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      .++.....||+|+||.||++..       ++..+|+|.+...                                      
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            3456678999999999999964       3567899987643                                      


Q ss_pred             ---CC------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 ---FP------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 ---~~------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                         ++                              ....++.++.|++.||+|||   +.+++|+||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence               11                              11345678999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~  215 (284)
                      +|+|||++........... .....+++.|+|||++.+..++.++|||||||++||+++ |..||....     .   ..
T Consensus       162 kL~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~---~~  232 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRV-GGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS-----N---TE  232 (280)
T ss_pred             EECCCCceeEcCCCceeec-CCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC-----H---HH
Confidence            9999999876543322111 112345788999999988889999999999999999998 888875422     1   11


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      ........... .               .+..++..+.+++.+||+.||++||++.+|++.|++
T Consensus       233 ~~~~~~~~~~~-~---------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         233 AIECITQGREL-E---------------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             HHHHHHcCccC-C---------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            11111111000 0               011223347899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-33  Score=240.47  Aligned_cols=197  Identities=21%  Similarity=0.284  Sum_probs=140.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||++..  +++.||+|++...                                           
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            3677888999999999999998  7889999998531                                           


Q ss_pred             -CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|.                +.....++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++..+.....
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT  157 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence             111                1345678999999999999   99999999999999999999999999999876544322


Q ss_pred             cccCCCCcccCccccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      ...  ....||+.|+|||++..     ..++.++|||||||++|+|++|..||....        ...............
T Consensus       158 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~--------~~~~~~~i~~~~~~~  227 (331)
T cd05597         158 VQS--NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHKEHF  227 (331)
T ss_pred             ccc--cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC--------HHHHHHHHHcCCCcc
Confidence            111  12468999999999863     457889999999999999999999986432        111111111111000


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCC--CCCCCHHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESE--GDRPTIVQVAKQ  276 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p--~~Rps~~ev~~~  276 (284)
                      .. .           +.....+..+.+++.+|+..++  ..||++.++++.
T Consensus       228 ~~-~-----------~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         228 QF-P-----------PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             cC-C-----------CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            00 0           0011123346788888776543  348899988764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=4.9e-33  Score=235.45  Aligned_cols=205  Identities=21%  Similarity=0.252  Sum_probs=152.7

Q ss_pred             eecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------C---
Q 039895           44 SFSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------F---   90 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------~---   90 (284)
                      .+.++.+..+.++|+..+.||+|+||.||++..  +++.+|+|++...                            +   
T Consensus         7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            356677888899999999999999999999998  7889999987542                            1   


Q ss_pred             ---------------CCc-------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           91 ---------------PFS-------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        91 ---------------~~~-------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                                     |..                   .....++.|++.||.|||   +.+|+||||||+||+++.++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~  163 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGV  163 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCE
Confidence                           100                   223458899999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY  211 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~  211 (284)
                      +|+|||++.........   .....|++.|+|||++..     ..++.++||||+||++|||++|..|+.....      
T Consensus       164 kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~------  234 (286)
T cd06638         164 KLVDFGVSAQLTSTRLR---RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP------  234 (286)
T ss_pred             EEccCCceeecccCCCc---cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch------
Confidence            99999998776433211   112468999999998753     4478899999999999999999999864320      


Q ss_pred             cHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          212 RLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                        ........ ........+             +......+.+++.+||+.+|++|||+.||++.
T Consensus       235 --~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         235 --MRALFKIP-RNPPPTLHQ-------------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             --hHHHhhcc-ccCCCcccC-------------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence              00000000 000001101             11122347899999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1e-32  Score=231.53  Aligned_cols=199  Identities=19%  Similarity=0.306  Sum_probs=146.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc---ceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR---PISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~---~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  ++.   .||+|.+...                                        
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            3466788999999999999998  333   5999998643                                        


Q ss_pred             --CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++.                ....+.++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence              110                0456788999999999999   9999999999999999999999999999987664332


Q ss_pred             ccccCCCCc--ccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          152 THINDSNRV--IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       152 ~~~~~~~~~--~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      .........  ..+..|+|||.+.+..++.++|||||||++||+++ |..||....     .......+   .....   
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-----~~~~~~~i---~~~~~---  229 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----NQDVINAI---EQDYR---  229 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC-----HHHHHHHH---HcCCc---
Confidence            211111111  12457999999998899999999999999999886 888885432     11111111   10000   


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                                   .+....++..+.+++.+||+.+|++||++.+|+..|+++
T Consensus       230 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         230 -------------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             -------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                         011122334578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.8e-33  Score=238.27  Aligned_cols=164  Identities=21%  Similarity=0.345  Sum_probs=117.5

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                      ....++.|++.||+|||   +.+++|+||||+|||++.++.++|+|||++..+........ .....+++.|+|||+...
T Consensus       131 ~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~  206 (296)
T cd05095         131 TLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRI-QGRAVLPIRWMSWESILL  206 (296)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceec-cCcCcCccccCCHHHHhc
Confidence            46788999999999999   99999999999999999999999999999876644322111 111345678999998888


Q ss_pred             CCCCcchhHHHHHHHHHHHHh--CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          175 GDFSEKSDVYSFGALLLELLT--GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      ..++.++|||||||++|||++  |..||....     ................ ....           .+.+..++..+
T Consensus       207 ~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~  269 (296)
T cd05095         207 GKFTTASDVWAFGVTLWEILTLCKEQPYSQLS-----DEQVIENTGEFFRDQG-RQVY-----------LPKPALCPDSL  269 (296)
T ss_pred             CCccchhhhhHHHHHHHHHHHhCCCCCccccC-----hHHHHHHHHHHHhhcc-cccc-----------CCCCCCCCHHH
Confidence            889999999999999999998  666764322     1111111111110000 0000           01111233458


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          253 TELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .+++.+||+.||++|||+.+|++.|++
T Consensus       270 ~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         270 YKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.5e-32  Score=228.75  Aligned_cols=191  Identities=21%  Similarity=0.278  Sum_probs=146.4

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|...+.||+|++|.||++..  +++.||+|.+...                                            
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            467778999999999999998  6789999987532                                            


Q ss_pred             CCC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 FPF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ~~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      +|.                 ......++.+++.||.|||   +.+++|+||+|+||+++.++.++|+|||++........
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~  157 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD  157 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence            111                 0345689999999999999   99999999999999999999999999999876643221


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                         ......+++.|+|||++.+..++.++||||||++++++++|..||....        ......... .+....    
T Consensus       158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~--------~~~~~~~~~-~~~~~~----  221 (257)
T cd08223         158 ---MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD--------MNSLVYRII-EGKLPP----  221 (257)
T ss_pred             ---ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHH-hcCCCC----
Confidence               1122568899999999998889999999999999999999999886322        112111111 111111    


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                 ........+.+++.+||+.+|++|||+.+++++
T Consensus       222 -----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         222 -----------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             -----------CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                       011233458899999999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=6.7e-33  Score=230.86  Aligned_cols=195  Identities=22%  Similarity=0.344  Sum_probs=146.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CCC-
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FPF-   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~~-   92 (284)
                      .+|...+.||+|+||.||+|.+ ++..+|+|++...                                        ++. 
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            3566678999999999999998 6889999988753                                        110 


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ......++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++...........  
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~--  158 (256)
T cd05112          84 GCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS--  158 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCccccc--
Confidence                           1345678999999999999   89999999999999999999999999999876543322111  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....++..|+|||.+.+..++.++||||||+++||+++ |..||....        .......... +  .....+.   
T Consensus       159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~-~--~~~~~~~---  224 (256)
T cd05112         159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS--------NSEVVETINA-G--FRLYKPR---  224 (256)
T ss_pred             CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHhC-C--CCCCCCC---
Confidence            11345678999999988889999999999999999998 888875322        1111211111 0  0001111   


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                                ..+..+.+|+.+||+.+|++|||+.++++.|.
T Consensus       225 ----------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         225 ----------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             ----------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence                      11234889999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.3e-32  Score=230.23  Aligned_cols=148  Identities=21%  Similarity=0.384  Sum_probs=109.8

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc-------ceeeccccccccCCCCccccCCCCcccCccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV-------AQLFDFTLSLSIPEGETHINDSNRVIGTFGF  166 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  166 (284)
                      ..++.++.||+.||+|||   +.+|+||||||+|||++.++.       ++++|||++.......       ...++..|
T Consensus       105 ~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~-------~~~~~~~y  174 (262)
T cd05077         105 PWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ-------ECVERIPW  174 (262)
T ss_pred             HHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc-------cccccccc
Confidence            456789999999999999   999999999999999987664       7999999986553221       14578899


Q ss_pred             ccccccc-CCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChh
Q 039895          167 MAPEYRT-TGDFSEKSDVYSFGALLLELL-TGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPE  244 (284)
Q Consensus       167 ~aPE~~~-~~~~~~~~DvwS~G~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
                      +|||.+. +..++.++|||||||++|||+ +|..|+....        .... .... .... ...              
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--------~~~~-~~~~-~~~~-~~~--------------  229 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT--------LAEK-ERFY-EGQC-MLV--------------  229 (262)
T ss_pred             cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc--------hhHH-HHHH-hcCc-cCC--------------
Confidence            9999886 456889999999999999998 4766664322        1110 0000 1100 000              


Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          245 KEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       245 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                       ......+.+|+.+||+.||++||++.+|++.|
T Consensus       230 -~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         230 -TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             -CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence             01123478999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.9e-33  Score=235.65  Aligned_cols=195  Identities=22%  Similarity=0.281  Sum_probs=142.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ++|...+.||+|+||.||+|..  ++..||+|.+...                                         +|
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4566667899999999999998  7889999987543                                         11


Q ss_pred             C---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 F---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      .               +.....++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++........   .
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~---~  162 (267)
T cd06645          89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA---K  162 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc---c
Confidence            1               1456779999999999999   89999999999999999999999999999876543221   1


Q ss_pred             CCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .....|++.|+|||++.   ...++.++|||||||++|+|++|..||.....     .  .. ..... .....   .+.
T Consensus       163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~-----~--~~-~~~~~-~~~~~---~~~  230 (267)
T cd06645         163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP-----M--RA-LFLMT-KSNFQ---PPK  230 (267)
T ss_pred             cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc-----h--hh-HHhhh-ccCCC---CCc
Confidence            12257899999999874   45688999999999999999999999864320     0  00 00000 00000   000


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...        ....+..+.+++.+||+.+|++|||+.+|++
T Consensus       231 ~~~--------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         231 LKD--------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             ccc--------cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            000        0011233779999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=9.3e-33  Score=235.26  Aligned_cols=193  Identities=20%  Similarity=0.287  Sum_probs=146.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ..|...+.||+|+||.||+|..  +++.||+|.+...                                         ++
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            5677888999999999999997  7899999998643                                         00


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||.|||   +.+++|+||||+|||++.++.++|+|||++.........   .
T Consensus        99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~---~  172 (297)
T cd06656          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---R  172 (297)
T ss_pred             CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC---c
Confidence                          11466789999999999999   999999999999999999999999999998765433221   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....+++.|+|||.+.+..++.++|||||||++|++++|..||.....  ...  ..    .....+ .+.         
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~--~~~--~~----~~~~~~-~~~---------  234 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP--LRA--LY----LIATNG-TPE---------  234 (297)
T ss_pred             CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc--chh--ee----eeccCC-CCC---------
Confidence            124688899999999888899999999999999999999999864321  000  00    000000 000         


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          ...+......+.+++.+||..+|++|||+.++++
T Consensus       235 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         235 ----LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             ----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                0011222344778999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.6e-33  Score=241.71  Aligned_cols=217  Identities=15%  Similarity=0.218  Sum_probs=149.3

Q ss_pred             cHHHHHHHh----cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------
Q 039895           46 SADELKTAT----DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------   89 (284)
Q Consensus        46 ~~~~l~~~~----~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------   89 (284)
                      +.+|+..++    +.|...+.||+|+||.||+|..  +|..||+|++...                              
T Consensus         2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~   81 (342)
T cd07879           2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLD   81 (342)
T ss_pred             chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhh
Confidence            445555554    7888889999999999999997  7899999988532                              


Q ss_pred             CC-------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 FP-------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ~~-------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                      ++                               .......++.|++.||+|||   +.+|+||||||+||+++.++.++|
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL  158 (342)
T cd07879          82 VFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKI  158 (342)
T ss_pred             eecccccCCCCceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence            00                               00334568999999999999   999999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||+++......      ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.....     ......+
T Consensus       159 ~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-----~~~~~~~  227 (342)
T cd07879         159 LDFGLARHADAEM------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQI  227 (342)
T ss_pred             eeCCCCcCCCCCC------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence            9999987653321      12467889999998866 4688999999999999999999999864321     1111100


Q ss_pred             HHHhhc--Ccccccccc--------cccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          218 KKYIEN--ESFKEIVDP--------AIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       218 ~~~~~~--~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ......  ..+.+....        .........+ .........+.+++.+||+.||++||++.+++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         228 LKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             HHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000000  000000000        0000000000 0001123447899999999999999999999854

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=6.8e-33  Score=235.29  Aligned_cols=203  Identities=21%  Similarity=0.266  Sum_probs=151.7

Q ss_pred             ecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------
Q 039895           45 FSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------   89 (284)
Q Consensus        45 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------   89 (284)
                      +...++..++++|...+.||+|+||.||++..  +++.+|+|++...                                 
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            45567777889999999999999999999998  7889999988532                                 


Q ss_pred             -------------CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcce
Q 039895           90 -------------FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ  137 (284)
Q Consensus        90 -------------~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k  137 (284)
                                   ++                   .+.....++.|++.||.|||   +.+++|+||||+||+++.++.++
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEE
Confidence                         00                   00334568999999999999   89999999999999999999999


Q ss_pred             eeccccccccCCCCccccCCCCcccCccccccccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcccc
Q 039895          138 LFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR  212 (284)
Q Consensus       138 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~  212 (284)
                      |+|||++..........   ....|+..|+|||++...     .++.++|||||||++|||++|..||....        
T Consensus       169 l~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~--------  237 (291)
T cd06639         169 LVDFGVSAQLTSTRLRR---NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH--------  237 (291)
T ss_pred             Eeecccchhcccccccc---cCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc--------
Confidence            99999987664332211   124678999999987643     36889999999999999999999986432        


Q ss_pred             HHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....+.... ......+.+             .......+.+++.+||+.+|++||++.++++
T Consensus       238 ~~~~~~~~~-~~~~~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         238 PVKTLFKIP-RNPPPTLLH-------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HHHHHHHHh-cCCCCCCCc-------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            011111111 111111111             1122334789999999999999999999975

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-32  Score=231.55  Aligned_cols=192  Identities=24%  Similarity=0.301  Sum_probs=147.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF------------------------------------------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------------------------------------------   90 (284)
                      ++|+..+.||.|++|.||+|..  ++..||+|.+....                                          
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            3577778999999999999998  78899999876430                                          


Q ss_pred             --------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           91 --------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        91 --------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                    ........++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++........   .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---~  154 (274)
T cd06609          81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS---K  154 (274)
T ss_pred             eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc---c
Confidence                          111556789999999999999   99999999999999999999999999999987754321   1


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      .....+++.|+|||++.+..++.++||||||+++|++++|..||....     ......   . ......+....     
T Consensus       155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~-----~~~~~~---~-~~~~~~~~~~~-----  220 (274)
T cd06609         155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH-----PMRVLF---L-IPKNNPPSLEG-----  220 (274)
T ss_pred             cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc-----hHHHHH---H-hhhcCCCCCcc-----
Confidence            122568889999999988889999999999999999999999985432     111111   1 11111111100     


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               ...+..+.+++.+||..+|++|||+.++++
T Consensus       221 ---------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         221 ---------NKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             ---------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence                     002334789999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.7e-32  Score=228.50  Aligned_cols=194  Identities=22%  Similarity=0.266  Sum_probs=144.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      .+|...+.||+|+||.||.|..  +|..||+|.+...                                           
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4688889999999999999998  6889999987421                                           


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           ++.               ....+.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~  158 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT  158 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence                 000               0345779999999999999   99999999999999999999999999999876543


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ............|+..|+|||++.+..++.++|||||||++|++++|..||....       .... .........    
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-------~~~~-~~~~~~~~~----  226 (265)
T cd06652         159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE-------AMAA-IFKIATQPT----  226 (265)
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc-------hHHH-HHHHhcCCC----
Confidence            2221112222568899999999988889999999999999999999999985321       1111 111111100    


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       .+          ..+......+.+++.+||. +|++||+++||++
T Consensus       227 -~~----------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         227 -NP----------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             -CC----------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence             00          0122333457789999995 9999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.6e-32  Score=233.76  Aligned_cols=192  Identities=19%  Similarity=0.313  Sum_probs=146.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC-
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP-   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~-   91 (284)
                      +|...+.||.|++|.||+|..  +|+.||+|.+...                                         ++ 
T Consensus        20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   99 (296)
T cd06655          20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLA   99 (296)
T ss_pred             eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecC
Confidence            477778999999999999997  8899999988543                                         11 


Q ss_pred             -------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           92 -------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        92 -------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                   ....+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........   ..
T Consensus       100 ~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~---~~  173 (296)
T cd06655         100 GGSLTDVVTETCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK---RS  173 (296)
T ss_pred             CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc---CC
Confidence                         11566789999999999999   999999999999999999999999999998765443221   11


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...++..|+|||.+.+..++.++|||||||++|++++|..||....     .  ..... ...... .....        
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~-----~--~~~~~-~~~~~~-~~~~~--------  236 (296)
T cd06655         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN-----P--LRALY-LIATNG-TPELQ--------  236 (296)
T ss_pred             CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H--HHHHH-HHHhcC-CcccC--------
Confidence            2468899999999988889999999999999999999999986432     0  11111 110000 00000        


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           .+......+.+++.+||..+|++|||+.+++.
T Consensus       237 -----~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         237 -----NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             -----CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                 01122334778999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.4e-32  Score=232.11  Aligned_cols=193  Identities=20%  Similarity=0.231  Sum_probs=143.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      +.|...+.||.|+||.||+|..  ++..+|+|.+...                                         ++
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            4567778999999999999998  6889999998644                                         11


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      .......++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.........  
T Consensus        92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~--  166 (292)
T cd06644          92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR--  166 (292)
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc--
Confidence                            11455779999999999999   999999999999999999999999999988654322111  


Q ss_pred             CCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          156 DSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                       .....+++.|+|||++.     ...++.++|||||||++|+|++|..||....        ......... ........
T Consensus       167 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~~  236 (292)
T cd06644         167 -RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIA-KSEPPTLS  236 (292)
T ss_pred             -cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc--------HHHHHHHHh-cCCCccCC
Confidence             11246788999999874     3457889999999999999999999885422        111111111 11100100


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                   .+......+.+++.+||+.+|++||++.++++
T Consensus       237 -------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         237 -------------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             -------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                         01122334789999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-32  Score=230.46  Aligned_cols=157  Identities=24%  Similarity=0.319  Sum_probs=117.5

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                      .+..++.|++.||+|||   +.+++|+||||+|||++.++.+||+|||++.......    .......+..|+|||++..
T Consensus       113 ~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~----~~~~~~~~~~y~apE~~~~  185 (270)
T cd05047         113 QLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNY  185 (270)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCccccchhh----hccCCCCccccCChHHHcc
Confidence            44788999999999999   9999999999999999999999999999985332111    1111233567999999988


Q ss_pred             CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHH
Q 039895          175 GDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT  253 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (284)
                      ..++.++|||||||++|||++ |..||....        .............. .               ........+.
T Consensus       186 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~--------~~~~~~~~~~~~~~-~---------------~~~~~~~~~~  241 (270)
T cd05047         186 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAELYEKLPQGYRL-E---------------KPLNCDDEVY  241 (270)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCccccC--------HHHHHHHHhCCCCC-C---------------CCCcCCHHHH
Confidence            889999999999999999997 888885422        11111111110000 0               0111223478


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          254 ELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       254 ~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      +++.+||+.+|.+|||+.+++..|+++++
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~~l~~~~~  270 (270)
T cd05047         242 DLMRQCWREKPYERPSFAQILVSLNRMLE  270 (270)
T ss_pred             HHHHHHcccChhhCCCHHHHHHHHHHhhC
Confidence            99999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.4e-32  Score=242.63  Aligned_cols=158  Identities=22%  Similarity=0.325  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD  176 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (284)
                      +.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......... .....+++.|+|||.+....
T Consensus       242 ~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~  317 (401)
T cd05107         242 VGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYIS-KGSTFLPLKWMAPESIFNNL  317 (401)
T ss_pred             HHHHHHHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccccc-CCCcCCCCceeChHHhcCCC
Confidence            457889999999999   99999999999999999999999999999976543222111 11245688999999998888


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHH
Q 039895          177 FSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTEL  255 (284)
Q Consensus       177 ~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (284)
                      ++.++|||||||++||+++ |..||....        ...........+...               +.+......+.+|
T Consensus       318 ~~~~~DvwslGvil~e~l~~g~~P~~~~~--------~~~~~~~~~~~~~~~---------------~~p~~~~~~l~~l  374 (401)
T cd05107         318 YTTLSDVWSFGILLWEIFTLGGTPYPELP--------MNEQFYNAIKRGYRM---------------AKPAHASDEIYEI  374 (401)
T ss_pred             CCcHhHHHHHHHHHHHHHHcCCCCCCCCC--------chHHHHHHHHcCCCC---------------CCCCCCCHHHHHH
Confidence            9999999999999999998 777875322        011111111111000               0011223458899


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          256 AFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       256 ~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      +.+||+.+|+.||++.||++.|+++.
T Consensus       375 i~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         375 MQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.5e-32  Score=233.16  Aligned_cols=213  Identities=14%  Similarity=0.184  Sum_probs=145.4

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ++++|...+.||+|+||.||+|..  +|..||+|++...                                         
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            457788889999999999999987  7889999998532                                         


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       ++.               ......++.|++.||.|||   +.+|+|+||||+|||++.++.++|+|||+++........
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  159 (291)
T cd07870          83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT  159 (291)
T ss_pred             ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence             110               0345678999999999999   899999999999999999999999999998764332211


Q ss_pred             ccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc---C-----
Q 039895          154 INDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN---E-----  224 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~-----  224 (284)
                         .....+++.|+|||++.+. .++.++|||||||++|++++|..||.....   ....+.. .......   .     
T Consensus       160 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~  232 (291)
T cd07870         160 ---YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD---VFEQLEK-IWTVLGVPTEDTWPGV  232 (291)
T ss_pred             ---CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh---HHHHHHH-HHHHcCCCChhhhhhh
Confidence               1124578899999988754 578899999999999999999999864320   0000110 0000000   0     


Q ss_pred             -cccccccccccCCCCCCChh---hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 -SFKEIVDPAIVGEEGLMWPE---KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ..+.................   .......+.+++.+|+..||++|||+.|++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence             00000000000000000000   0011345779999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.7e-33  Score=243.51  Aligned_cols=197  Identities=21%  Similarity=0.271  Sum_probs=141.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||++..  .++.+|+|++...                                           
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            3677788999999999999998  6788999998531                                           


Q ss_pred             -CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|..                .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.....
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  157 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence             1110                345678999999999999   99999999999999999999999999999876543322


Q ss_pred             cccCCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      ...  ....||+.|+|||++.     ...++.++|||||||++|||++|..||....        ...............
T Consensus       158 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~  227 (332)
T cd05623         158 VQS--SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHKERF  227 (332)
T ss_pred             cee--cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC--------HHHHHHHHhCCCccc
Confidence            111  1256999999999886     3467899999999999999999999996432        111121111110000


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD--RPTIVQVAKQ  276 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~ev~~~  276 (284)
                      . +.           .........+.+++.+|+..+|++  |+++.|+++.
T Consensus       228 ~-~p-----------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         228 Q-FP-----------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             c-CC-----------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            0 00           001122344778999988665444  7899998765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.6e-32  Score=229.04  Aligned_cols=193  Identities=22%  Similarity=0.367  Sum_probs=146.3

Q ss_pred             CCCCCCeeeecCCceEEEEEe---CCcceEEEeecCC-------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL---QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +|+..+.||+|+||.||+|..   .+..+|+|.+...                                           
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            477788999999999999999   3578999976421                                           


Q ss_pred             ---------CCC-------------------chhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeec
Q 039895           90 ---------FPF-------------------SVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        90 ---------~~~-------------------~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                               ++.                   ......++.|++.||.|||   + .+++|+||+|+||+++.++.++|+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEec
Confidence                     110                   0345678999999999999   5 6899999999999999999999999


Q ss_pred             cccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       141 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      ||++........    .....|+..|+|||++.+..++.++||||||+++|++++|..||....        ........
T Consensus       158 fg~~~~~~~~~~----~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~--------~~~~~~~~  225 (269)
T cd08528         158 FGLAKQKQPESK----LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN--------MLSLATKI  225 (269)
T ss_pred             ccceeecccccc----cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC--------HHHHHHHH
Confidence            999977654331    122568899999999998889999999999999999999999985432        11111111


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      . ........              .......+.+++.+||+.||++||++.||..+|.
T Consensus       226 ~-~~~~~~~~--------------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         226 V-EAVYEPLP--------------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             h-hccCCcCC--------------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            1 11111000              0112234789999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.3e-33  Score=241.24  Aligned_cols=181  Identities=23%  Similarity=0.268  Sum_probs=137.3

Q ss_pred             CeeeecCCceEEEEEe-----CCcceEEEeecCC-------------------------------------------CCC
Q 039895           61 KVIMKCLFYKLYKGFL-----QDRPISVMKFEDT-------------------------------------------FPF   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~-------------------------------------------~~~   92 (284)
                      +.||+|+||.||++..     +|..||+|++...                                           +|.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999875     5789999998642                                           111


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........   .
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~---~  155 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK---A  155 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc---e
Confidence                           1456778999999999999   999999999999999999999999999998765433211   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....||+.|+|||++....++.++|||||||++|||++|+.||....        ......... .... .         
T Consensus       156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~--------~~~~~~~i~-~~~~-~---------  216 (318)
T cd05582         156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD--------RKETMTMIL-KAKL-G---------  216 (318)
T ss_pred             ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC--------HHHHHHHHH-cCCC-C---------
Confidence            12578999999999988889999999999999999999999986432        111111111 1100 0         


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ  272 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  272 (284)
                            .+......+.+++.+||+.||++|||+.+
T Consensus       217 ------~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         217 ------MPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             ------CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                  01112234779999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.3e-32  Score=227.75  Aligned_cols=192  Identities=24%  Similarity=0.354  Sum_probs=143.1

Q ss_pred             CeeeecCCceEEEEEe-C--Cc--ceEEEeecCCCC--------------------------------------------
Q 039895           61 KVIMKCLFYKLYKGFL-Q--DR--PISVMKFEDTFP--------------------------------------------   91 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~-~--~~--~vavK~~~~~~~--------------------------------------------   91 (284)
                      +.||+|++|.||+|.+ +  +.  .||+|.+.....                                            
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            3689999999999998 2  22  589999875411                                            


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||++..+..........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME  157 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence                          00345678899999999999   9999999999999999999999999999998775433222222


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....++..|+|||.+.+..++.++|||||||++|+|++ |..||....        ..+...........  .       
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~~~~~~~--~-------  220 (257)
T cd05040         158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS--------GSQILKKIDKEGER--L-------  220 (257)
T ss_pred             cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHhcCCc--C-------
Confidence            22457789999999988889999999999999999999 998875322        11111111111100  0       


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                            +.+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       221 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         221 ------ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             ------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence                  001122345889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=3.6e-33  Score=236.59  Aligned_cols=196  Identities=23%  Similarity=0.314  Sum_probs=143.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|.....||+|+||.||++..  ++..||+|.+...                                           +
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            444567899999999999999  7899999988642                                           1


Q ss_pred             CC-------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           91 PF-------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 ~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                      +.                   ......++.+++.||+|||+  ..+++||||||+||+++.++.++|+|||++..+....
T Consensus        85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  162 (288)
T cd06616          85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI  162 (288)
T ss_pred             ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence            10                   02346789999999999992  3599999999999999999999999999987654332


Q ss_pred             ccccCCCCcccCccccccccccCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTG---DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ..    ....|++.|+|||++...   .++.++|||||||++|++++|..||....       ........... ...  
T Consensus       163 ~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~-~~~--  228 (288)
T cd06616         163 AK----TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVK-GDP--  228 (288)
T ss_pred             cc----ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcC-CCC--
Confidence            11    114578999999998766   68899999999999999999999985321       11111111111 110  


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                         +.+...      .....+..+.+|+.+||+.+|++|||+.+|+..
T Consensus       229 ---~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         229 ---PILSNS------EEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             ---CcCCCc------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               011000      112234458899999999999999999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=2.1e-32  Score=229.70  Aligned_cols=159  Identities=21%  Similarity=0.289  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC-
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-  174 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  174 (284)
                      .+.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||++............ ....+++.|+|||++.. 
T Consensus       102 ~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~  177 (269)
T cd05042         102 LQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK-DCHAVPLRWLAPELVEIR  177 (269)
T ss_pred             HHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheecc-CCCCCcccccCHHHHhhc
Confidence            4678999999999999   999999999999999999999999999998654332221111 22456778999998642 


Q ss_pred             ------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHH
Q 039895          175 ------GDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQ  247 (284)
Q Consensus       175 ------~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
                            ..++.++|||||||++|||++ |..||....     .   ........... ...+..+.+          ...
T Consensus       178 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~---~~~~~~~~~~~-~~~~~~~~~----------~~~  238 (269)
T cd05042         178 GQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS-----D---EQVLKQVVREQ-DIKLPKPQL----------DLK  238 (269)
T ss_pred             cccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC-----H---HHHHHHHhhcc-CccCCCCcc----------ccc
Confidence                  356789999999999999999 666664321     1   11111111111 111111111          112


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          248 QLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       248 ~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      ....+.+++..|| .||++|||+.+|++.|.
T Consensus       239 ~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         239 YSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            2334667888998 59999999999998873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.8e-32  Score=231.73  Aligned_cols=190  Identities=20%  Similarity=0.217  Sum_probs=140.0

Q ss_pred             CCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC---
Q 039895           58 DGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP---   91 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~---   91 (284)
                      +..+.||+|+||.||+|..  ++..+++|.+...                                         ++   
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~   87 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   87 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence            3456799999999999999  6778899987643                                         11   


Q ss_pred             -------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           92 -------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        92 -------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                   .+..+..++.|++.||.|||   +.+++|+||||+|||++.++.++|+|||++........   ...
T Consensus        88 ~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---~~~  161 (282)
T cd06643          88 AVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ---RRD  161 (282)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccccc---ccc
Confidence                         11456779999999999999   99999999999999999999999999999876543221   112


Q ss_pred             CcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          159 RVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      ...+++.|+|||++.     ...++.++|||||||++|+|++|..||....        ....+...... .......  
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~-~~~~~~~--  230 (282)
T cd06643         162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKS-EPPTLAQ--  230 (282)
T ss_pred             cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC--------HHHHHHHHhhc-CCCCCCC--
Confidence            256899999999874     3457889999999999999999999885422        11111111110 0001000  


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 +...+..+.+++.+||+.+|++|||+.++++
T Consensus       231 -----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         231 -----------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             -----------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                       1112334789999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2e-32  Score=233.28  Aligned_cols=189  Identities=19%  Similarity=0.277  Sum_probs=142.8

Q ss_pred             CCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC-----
Q 039895           60 GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP-----   91 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~-----   91 (284)
                      ...||+|+||.||++..  ++..||+|.+...                                         ++     
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            45799999999999988  7899999998543                                         11     


Q ss_pred             ---------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCccc
Q 039895           92 ---------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG  162 (284)
Q Consensus        92 ---------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g  162 (284)
                               .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........   .....|
T Consensus       106 ~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~  179 (297)
T cd06659         106 TDIVSQTRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK---RKSLVG  179 (297)
T ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc---ccceec
Confidence                     11456789999999999999   999999999999999999999999999998765433211   112568


Q ss_pred             CccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCC
Q 039895          163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMW  242 (284)
Q Consensus       163 t~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
                      +..|+|||++.+..++.++|||||||+++||++|..||....        ......... ........            
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~~------------  238 (297)
T cd06659         180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--------PVQAMKRLR-DSPPPKLK------------  238 (297)
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHh-ccCCCCcc------------
Confidence            999999999988889999999999999999999999986422        111111111 11000000            


Q ss_pred             hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          243 PEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       243 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                       ........+.+++.+||+.+|++||++.++++.
T Consensus       239 -~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         239 -NAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             -ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence             001122347799999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2.6e-32  Score=235.58  Aligned_cols=140  Identities=19%  Similarity=0.223  Sum_probs=111.0

Q ss_pred             CCeeeec--CCceEEEEEe--CCcceEEEeecCC-------------------------------------------CCC
Q 039895           60 GKVIMKC--LFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FPF   92 (284)
Q Consensus        60 ~~~lg~G--~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~~   92 (284)
                      ..+||+|  +|++||++..  +|..||+|++...                                           +|.
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            4689999  7889999998  8899999998643                                           111


Q ss_pred             -----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc--
Q 039895           93 -----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH--  153 (284)
Q Consensus        93 -----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~--  153 (284)
                                       ......++.|++.||.|||   +.+|+||||||+|||++.++.++++||+...........  
T Consensus        83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (327)
T cd08227          83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR  159 (327)
T ss_pred             CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence                             1345679999999999999   999999999999999999999999999865443221110  


Q ss_pred             --ccCCCCcccCccccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 039895          154 --INDSNRVIGTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       154 --~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~G~il~elltg~~p~~~  202 (284)
                        ........++..|+|||++.+  ..++.++|||||||++|||++|..||..
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence              011112356788999999875  4588999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.3e-32  Score=233.05  Aligned_cols=207  Identities=20%  Similarity=0.273  Sum_probs=146.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|...+.||+|+||.||++..  ++..+|+|.+...                                          +
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            4688889999999999999998  6788999987533                                          1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +.               ......++.|++.||.|||   + .+++|+||||+|||++.++.++|+|||++........  
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--  155 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--  155 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCccccccccc--
Confidence            11               1345689999999999999   6 5899999999999999999999999999866533221  


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc-------
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK-------  227 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  227 (284)
                         ....|++.|+|||++.+..++.++|||||||++|++++|..||....     ..................       
T Consensus       156 ---~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  227 (308)
T cd06615         156 ---NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD-----AKELEAMFGRPVSEGEAKESHRPVS  227 (308)
T ss_pred             ---ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc-----hhhHHHhhcCccccccccCCccccc
Confidence               12568999999999888889999999999999999999999985422     111111110000000000       


Q ss_pred             -------------ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          228 -------------EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       228 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                   +..+... .......+. ......+.+++.+||+.+|++|||+.+|++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         228 GHPPDSPRPMAIFELLDYIV-NEPPPKLPS-GAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             CCCCCccchhhHHHHHHHHh-cCCCccCcC-cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                         0000000 000000000 0133458899999999999999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.2e-33  Score=253.64  Aligned_cols=175  Identities=21%  Similarity=0.269  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      ...++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+........  ....||+.|+|||++.+.
T Consensus       269 ~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~  343 (501)
T PHA03210        269 TRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFD--YGWVGTVATNSPEILAGD  343 (501)
T ss_pred             HHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCccccccc--ccccCCcCCCCchhhcCC
Confidence            4568999999999999   99999999999999999999999999999987754332211  125799999999999998


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh-hcCcccc-------cccccccCCCCCCChh---
Q 039895          176 DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI-ENESFKE-------IVDPAIVGEEGLMWPE---  244 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~---  244 (284)
                      .++.++|||||||++|||++|..++..... ......+...+.... ....++.       .++...........+.   
T Consensus       344 ~~~~~~DiwSlGvil~ell~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~  422 (501)
T PHA03210        344 GYCEITDIWSCGLILLDMLSHDFCPIGDGG-GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIR  422 (501)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCccCCC-CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHH
Confidence            999999999999999999999865543221 111111111111100 0000110       0000000000000000   


Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          245 KEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       245 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .......+.+++.+||+.||++|||+.|++..
T Consensus       423 ~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        423 NLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             hcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            00112346788999999999999999999863

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.8e-32  Score=228.05  Aligned_cols=193  Identities=25%  Similarity=0.353  Sum_probs=147.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------CCC-
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------FPF-   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------~~~-   92 (284)
                      ++|+..+.||+|+||.||+|..  ++..+++|.+...                                       ++. 
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   82 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA   82 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence            6788889999999999999999  4789999988643                                       110 


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........   .
T Consensus        83 ~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~---~  156 (256)
T cd06612          83 GSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK---R  156 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCccc---c
Confidence                           1455679999999999999   999999999999999999999999999998876543211   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....|+..|+|||++.+..++.++||||||+++|+|++|..||.....     .  .. ... .....     .+     
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~-----~--~~-~~~-~~~~~-----~~-----  217 (256)
T cd06612         157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP-----M--RA-IFM-IPNKP-----PP-----  217 (256)
T ss_pred             ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch-----h--hh-hhh-hccCC-----CC-----
Confidence            124578899999999888899999999999999999999999864320     0  00 000 00000     00     


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                         ....+......+.+++.+||+.+|++|||+.||+.
T Consensus       218 ---~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         218 ---TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             ---CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence               00112223345889999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=5e-32  Score=226.82  Aligned_cols=195  Identities=26%  Similarity=0.367  Sum_probs=144.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------------   89 (284)
                      +|...+.||+|+||+||+|.. +|+.+|+|.+...                                             
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            366788999999999999998 8889999987532                                             


Q ss_pred             --CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        +|.               +.....++.|++.||+|||   +.+|+|+||+|+||++++++.++|+|||++........
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  157 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL  157 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence              110               1345568999999999999   89999999999999999999999999999876532111


Q ss_pred             c---ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          153 H---INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       153 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .   ........|+..|+|||++.+..++.++|||||||++|++++|..||....     .  ..............+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~--~~~~~~~~~~~~~~~~~  230 (265)
T cd06631         158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD-----R--LAAMFYIGAHRGLMPRL  230 (265)
T ss_pred             cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC-----h--HHHHHHhhhccCCCCCC
Confidence            1   111122568999999999988889999999999999999999999986422     0  11110000000111110


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                     +......+.+++.+||+.+|++|||+.+++.
T Consensus       231 ---------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         231 ---------------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             ---------------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                           1112334789999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=3e-32  Score=226.32  Aligned_cols=190  Identities=23%  Similarity=0.368  Sum_probs=141.6

Q ss_pred             CeeeecCCceEEEEEe-CCcceEEEeecCC------------------------------------------CC------
Q 039895           61 KVIMKCLFYKLYKGFL-QDRPISVMKFEDT------------------------------------------FP------   91 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------------------------------------------~~------   91 (284)
                      ++||+|+||.||++.. .++.||+|.+...                                          ++      
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            4799999999999998 5899999987643                                          00      


Q ss_pred             ----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcc
Q 039895           92 ----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        92 ----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                .....+.++.+++.||.|||   +.+++||||+|+||+++.++.++|+|||++........... .....
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-~~~~~  156 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS-DGLKQ  156 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec-cccCc
Confidence                      00345678999999999999   99999999999999999999999999999876643222111 11123


Q ss_pred             cCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCC
Q 039895          162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL  240 (284)
Q Consensus       162 gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
                      ++..|+|||.+.+..++.++||||||+++|++++ |..||....     .......+    ....  ..           
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~-----~~~~~~~~----~~~~--~~-----------  214 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS-----NQQTRERI----ESGY--RM-----------  214 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC-----HHHHHHHH----hcCC--CC-----------
Confidence            4667999999988889999999999999999999 677764322     01111111    1100  00           


Q ss_pred             CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                        +.+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus       215 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         215 --PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             --CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence              001122345889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-33  Score=242.33  Aligned_cols=198  Identities=24%  Similarity=0.328  Sum_probs=156.9

Q ss_pred             CCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------CCCc---------------
Q 039895           58 DGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------FPFS---------------   93 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------~~~~---------------   93 (284)
                      .-.++||-|.||.||.|.|  ..-.||||.++..                           .|..               
T Consensus       270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGN  349 (1157)
T KOG4278|consen  270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGN  349 (1157)
T ss_pred             eeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCcc
Confidence            3457899999999999999  6778999999876                           1211               


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     .-.+.+|.||++|+.||.   .+++|||||-.+|+|+.++..+|++|||+++.+..+.+..... 
T Consensus       350 LLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAG-  425 (1157)
T KOG4278|consen  350 LLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAG-  425 (1157)
T ss_pred             HHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccC-
Confidence                           345678999999999999   9999999999999999999999999999999886554433222 


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                       ..-++.|.|||.+....++.|+|||+|||+|||+.| |-.|+.+..        +. .+...++.              
T Consensus       426 -AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid--------lS-qVY~LLEk--------------  481 (1157)
T KOG4278|consen  426 -AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LS-QVYGLLEK--------------  481 (1157)
T ss_pred             -ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc--------HH-HHHHHHhc--------------
Confidence             234678999999999999999999999999999998 555654322        11 12222211              


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                       +.+...++-|++.+.+||..||+++|.+||++.|+.+.++.++.+|
T Consensus       482 -gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s  527 (1157)
T KOG4278|consen  482 -GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS  527 (1157)
T ss_pred             -cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence             1222335567778999999999999999999999999999998764

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.1e-32  Score=235.81  Aligned_cols=159  Identities=23%  Similarity=0.336  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      ++.++.|++.||.|||   +.+++||||||+|||++.++.+||+|||+++.......... .....++..|+|||++.+.
T Consensus       136 ~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  211 (334)
T cd05100         136 LVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKK-TTNGRLPVKWMAPEALFDR  211 (334)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcccceeccccccccc-ccCCCcCceEcCHHHhccC
Confidence            3568899999999999   99999999999999999999999999999876644322111 1113345789999999888


Q ss_pred             CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          176 DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       176 ~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      .++.++||||||+++|||++ |..||....        ......... ......               .+...+..+.+
T Consensus       212 ~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~-~~~~~~---------------~~~~~~~~l~~  267 (334)
T cd05100         212 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIP--------VEELFKLLK-EGHRMD---------------KPANCTHELYM  267 (334)
T ss_pred             CcCchhhhHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHH-cCCCCC---------------CCCCCCHHHHH
Confidence            89999999999999999998 777775322        122221111 111000               01122334789


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      ++.+||+.+|++|||+.|+++.|+++..
T Consensus       268 li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         268 IMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=4.6e-32  Score=226.00  Aligned_cols=190  Identities=27%  Similarity=0.377  Sum_probs=145.4

Q ss_pred             CeeeecCCceEEEEEeC-----CcceEEEeecCC------------------------------------------CC--
Q 039895           61 KVIMKCLFYKLYKGFLQ-----DRPISVMKFEDT------------------------------------------FP--   91 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~~-----~~~vavK~~~~~------------------------------------------~~--   91 (284)
                      +.||+|+||.||+|...     +..||+|.+...                                          +|  
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            47999999999999993     789999998754                                          11  


Q ss_pred             ----------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           92 ----------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        92 ----------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                                            .+.....++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence                                  11345789999999999999   99999999999999999999999999999987765


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      .... .......+++.|+|||.+....++.++||||+|++++++++ |..||....        ......... .+... 
T Consensus       158 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~-~~~~~-  226 (262)
T cd00192         158 DDYY-RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS--------NEEVLEYLR-KGYRL-  226 (262)
T ss_pred             cccc-ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHH-cCCCC-
Confidence            4321 11222567889999999988889999999999999999999 588875432        111111111 11000 


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                                    +.+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus       227 --------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         227 --------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             --------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                          011222445889999999999999999999998873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-32  Score=238.88  Aligned_cols=195  Identities=24%  Similarity=0.292  Sum_probs=153.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      ...|+..+.||.|.||.||++..  +|+.+|+|++.+.                                          
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            34577789999999999999999  7999999999765                                          


Q ss_pred             ----------------C-CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC----CcceeeccccccccC
Q 039895           90 ----------------F-PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE----NVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 ----------------~-~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~Dfg~a~~~~  148 (284)
                                      . ..+.....++.|++.|+.|||   +.+|+||||||+|+|+...    +.+|++|||++....
T Consensus       114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~  190 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK  190 (382)
T ss_pred             EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence                            1 333566789999999999999   9999999999999999643    479999999999887


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      .+...    ...+||+.|+|||++....|+..+||||+|+++|.|++|.+||....    ......     .+..+.+  
T Consensus       191 ~~~~~----~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~----~~~~~~-----~i~~~~~--  255 (382)
T KOG0032|consen  191 PGERL----HTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET----EFEIFL-----AILRGDF--  255 (382)
T ss_pred             CCceE----eeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC----hhHHHH-----HHHcCCC--
Confidence            63222    22789999999999999999999999999999999999999998644    101111     1111111  


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                ....+........+.+++..|+..||..|+|+.+++++
T Consensus       256 ----------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  256 ----------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             ----------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence                      00111122334557899999999999999999999874

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=2.7e-32  Score=237.86  Aligned_cols=144  Identities=17%  Similarity=0.251  Sum_probs=121.3

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..+.|+..+.||+|+||.||+|..  +|+.||+|.+...                                         
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            457899899999999999999998  8899999998532                                         


Q ss_pred             --------CC------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 --------FP------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 --------~~------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                              +|            .......++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++.....
T Consensus        94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence                    00            00334568999999999999   99999999999999999999999999999977644


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ...    .....+++.|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus       171 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~  220 (353)
T cd07850         171 SFM----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT  220 (353)
T ss_pred             CCC----CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence            322    11246789999999999889999999999999999999999998643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-32  Score=228.63  Aligned_cols=195  Identities=22%  Similarity=0.331  Sum_probs=146.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ++|...+.||+|+||.||+|..  ++..+|+|++...                                         ++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            5677888999999999999998  6788999987643                                         11


Q ss_pred             C----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 F----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      .                ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........  
T Consensus        83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~--  157 (262)
T cd06613          83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK--  157 (262)
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhhc--
Confidence            0                1345679999999999999   999999999999999999999999999998766432211  


Q ss_pred             CCCCcccCccccccccccCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTG---DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                       .....++..|+|||.+...   .++.++||||||+++|+|++|..||....     .   ........ ...+.   .+
T Consensus       158 -~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~-----~---~~~~~~~~-~~~~~---~~  224 (262)
T cd06613         158 -RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH-----P---MRALFLIS-KSNFP---PP  224 (262)
T ss_pred             -cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC-----H---HHHHHHHH-hccCC---Cc
Confidence             1125678899999998776   78899999999999999999999986432     0   00010000 00000   00


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+        ......+..+.+++.+||+.+|+.|||+.+|+.
T Consensus       225 ~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         225 KL--------KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             cc--------cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00        012233455889999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=5.3e-32  Score=227.28  Aligned_cols=194  Identities=20%  Similarity=0.227  Sum_probs=135.5

Q ss_pred             CeeeecCCceEEEEEe----CCcceEEEeecCC------------------------------------------CCCc-
Q 039895           61 KVIMKCLFYKLYKGFL----QDRPISVMKFEDT------------------------------------------FPFS-   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~------------------------------------------~~~~-   93 (284)
                      +.||+|+||.||+|.+    .+..+|+|.+...                                          ++.. 
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            3689999999999987    2356899987643                                          1110 


Q ss_pred             -------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           94 -------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        94 -------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                         ...+.++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++..........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence                               123468899999999999   9999999999999999999999999999987554332211


Q ss_pred             cCCCCcccCccccccccccCC-------CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTG-------DFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                       ......++..|+|||++...       .++.++||||||+++|||++ |..||....     .......   .. ....
T Consensus       158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-----~~~~~~~---~~-~~~~  227 (269)
T cd05087         158 -TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLS-----DEQVLTY---TV-REQQ  227 (269)
T ss_pred             -cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHH---Hh-hccc
Confidence             11224578889999987542       35789999999999999996 988885422     0111111   11 1111


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      .....+.+.          ......+.+++..|| .+|++|||+.||+..|.
T Consensus       228 ~~~~~~~~~----------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         228 LKLPKPRLK----------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCCCccC----------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            111111111          011223678999999 58999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=8.2e-32  Score=226.02  Aligned_cols=199  Identities=20%  Similarity=0.208  Sum_probs=150.4

Q ss_pred             cHHHHHHHhcCCCCCCee--eecCCceEEEEEe--CCcceEEEeecCC--------------------------------
Q 039895           46 SADELKTATDDFDGGKVI--MKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------   89 (284)
Q Consensus        46 ~~~~l~~~~~~f~~~~~l--g~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------   89 (284)
                      +..++....++|+..+.+  |+|+||.||++..  ++..+|+|.+...                                
T Consensus         5 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390          5 SLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            345556666777777776  9999999999998  7888999988653                                


Q ss_pred             -----CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccC
Q 039895           90 -----FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIP  148 (284)
Q Consensus        90 -----~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~  148 (284)
                           ++               .+.....++.|++.||.|||   +.+++||||+|+||+++.++ .++|+|||++....
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~  161 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG  161 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence                 11               11556789999999999999   99999999999999999998 99999999987654


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ....       ..|+..|+|||++.+..++.++||||||+++|+|++|..||....   ........+....  .... .
T Consensus       162 ~~~~-------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~--~~~~-~  228 (267)
T PHA03390        162 TPSC-------YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE---DEELDLESLLKRQ--QKKL-P  228 (267)
T ss_pred             CCcc-------CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---cchhhHHHHHHhh--cccC-C
Confidence            3221       457899999999998889999999999999999999999986432   1111122221111  0000 0


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-IVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~ev~~  275 (284)
                                     ........+.+++.+||+.+|.+||+ ++++++
T Consensus       229 ---------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        229 ---------------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             ---------------cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence                           01123344789999999999999996 588874

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=8.2e-33  Score=239.10  Aligned_cols=197  Identities=21%  Similarity=0.278  Sum_probs=142.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||++..  +++.||+|++...                                           
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4677888999999999999998  7788999988542                                           


Q ss_pred             -CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|..                .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++........
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence             1110                345568899999999999   99999999999999999999999999999977654332


Q ss_pred             cccCCCCcccCccccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      ...  ....||+.|+|||++.+     ..++.++|||||||++|+|++|+.||....        ...............
T Consensus       158 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~  227 (331)
T cd05624         158 VQS--SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHEERF  227 (331)
T ss_pred             eee--ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC--------HHHHHHHHHcCCCcc
Confidence            211  12568999999998865     467889999999999999999999996432        111111111110000


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD--RPTIVQVAKQ  276 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~ev~~~  276 (284)
                      . +.+           .....+..+.+++.+|+..++.+  |+++.++++.
T Consensus       228 ~-~p~-----------~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         228 Q-FPS-----------HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             c-CCC-----------ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            0 000           01122345778999999866544  5688888653

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-33  Score=236.36  Aligned_cols=188  Identities=23%  Similarity=0.311  Sum_probs=146.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------CCC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------FPF--   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------~~~--   92 (284)
                      +.|..-++||+||||.||-++.  +|+.+|.|++.+.                                      .|.  
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            5788889999999999999998  8999999988654                                      111  


Q ss_pred             ---------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           93 ---------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        93 ---------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                           +...+.+|.+|+.||++||   ...||.|||||+|||+|++|.++|+|+|+|..+..+.
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~  341 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK  341 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence                                 1556679999999999999   9999999999999999999999999999999988766


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ....    .+||.+|||||++.+..|+...|-||+||++|||+.|+.||.....     ..-..-             +|
T Consensus       342 ~~~~----rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke-----Kvk~eE-------------vd  399 (591)
T KOG0986|consen  342 PIRG----RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE-----KVKREE-------------VD  399 (591)
T ss_pred             cccc----ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh-----hhhHHH-------------HH
Confidence            5433    4899999999999999999999999999999999999999964320     000001             11


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                      .....+. ..+  +...++++.+|....|+.||++|...
T Consensus       400 rr~~~~~-~ey--~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  400 RRTLEDP-EEY--SDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             HHHhcch-hhc--ccccCHHHHHHHHHHHccCHHHhccC
Confidence            1111110 000  12334457788888999999999754

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.7e-32  Score=257.98  Aligned_cols=199  Identities=21%  Similarity=0.267  Sum_probs=144.7

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------   89 (284)
                      +.....++|...+.||+|+||+||++..  .+..||+|++...                                     
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            3344557888899999999999999999  7788999987632                                     


Q ss_pred             --------CCC-------------------chhHHHHHHHHHHHHHHhccCC----CCCeeecccccCcEEEecC-----
Q 039895           90 --------FPF-------------------SVSKLKIAIEIASAVAYLHVGF----SRPVVSRDIKPTTIVLQEE-----  133 (284)
Q Consensus        90 --------~~~-------------------~~~~~~i~~~i~~gL~~LH~~~----~~~ivHrDlkp~NILl~~~-----  133 (284)
                              +|.                   +...+.|+.||+.||.|||...    ..+||||||||+|||++..     
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence                    111                   0345678999999999999321    1569999999999999642     


Q ss_pred             ------------CcceeeccccccccCCCCccccCCCCcccCccccccccccC--CCCCcchhHHHHHHHHHHHHhCCCC
Q 039895          134 ------------NVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKKI  199 (284)
Q Consensus       134 ------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~G~il~elltg~~p  199 (284)
                                  +.+||+|||++..+......    ....||+.|+|||++.+  ..++.++|||||||++|||++|..|
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~----~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P  242 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIESMA----HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP  242 (1021)
T ss_pred             cccccccccCCCCceEEccCCccccccccccc----cccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence                        34899999999776433221    12578999999999854  4588999999999999999999999


Q ss_pred             CCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          200 SYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      |....       .....+........++      +           ...+..+.+|+..||+.+|.+||++.|++.
T Consensus       243 F~~~~-------~~~qli~~lk~~p~lp------i-----------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        243 FHKAN-------NFSQLISELKRGPDLP------I-----------KGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             CCcCC-------cHHHHHHHHhcCCCCC------c-----------CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            86422       1112222111110000      0           011234789999999999999999999984

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2e-32  Score=231.85  Aligned_cols=211  Identities=20%  Similarity=0.302  Sum_probs=147.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|..  ++..||+|++...                                           
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3577788999999999999998  6789999987642                                           


Q ss_pred             CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      ++               .......++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||++..........
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence            11               11456678999999999999   8999999999999999999999999999987765443211


Q ss_pred             cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc--Ccccccc-
Q 039895          155 NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN--ESFKEIV-  230 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-  230 (284)
                      .  ....++..|+|||++.+. .++.++||||||+++|++++|..||....    ....+.. .......  ....... 
T Consensus       158 ~--~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~  230 (288)
T cd07833         158 L--TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDS----DIDQLYL-IQKCLGPLPPSHQELFS  230 (288)
T ss_pred             c--cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHH-HHHHhCCCCHHHhhhcc
Confidence            1  125678899999999887 78999999999999999999998886432    1000111 0010000  0000000 


Q ss_pred             -cccccCCC--CCCCh------hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 -DPAIVGEE--GLMWP------EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 -~~~~~~~~--~~~~~------~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ++......  ....+      .+...+..+.+++.+||+.+|++|||++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence             00000000  00000      01112456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.2e-32  Score=230.55  Aligned_cols=190  Identities=26%  Similarity=0.362  Sum_probs=143.6

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CCC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FPF   92 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~~   92 (284)
                      |+..+.||+|+||.||+|.+  ++..||+|.+...                                          +|.
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            33446799999999999988  6789999988633                                          111


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    ......++.|++.||.|||   ..+++|+||+|+||+++.++.++++|||++..+......   ..
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~---~~  159 (277)
T cd06642          86 GGSALDLLKPGPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---RN  159 (277)
T ss_pred             CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcchh---hh
Confidence                          1455678999999999999   999999999999999999999999999998766533211   11


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...|+..|+|||++.+..++.++|||||||++||+++|..|+....     ......    ......     .+.+    
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-----~~~~~~----~~~~~~-----~~~~----  221 (277)
T cd06642         160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH-----PMRVLF----LIPKNS-----PPTL----  221 (277)
T ss_pred             cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc-----hhhHHh----hhhcCC-----CCCC----
Confidence            2467889999999988889999999999999999999999875322     000000    000000     0100    


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                            ....+..+.+++.+||+.+|++|||+.++++.
T Consensus       222 ------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         222 ------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             ------CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                  11233447899999999999999999999973

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.4e-32  Score=229.46  Aligned_cols=150  Identities=20%  Similarity=0.337  Sum_probs=109.8

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc--------ceeeccccccccCCCCccccCCCCcccCcc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV--------AQLFDFTLSLSIPEGETHINDSNRVIGTFG  165 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~  165 (284)
                      ..++.++.||+.||.|||   +.+|+||||||+||+++.++.        ++++|||++.......       ...+++.
T Consensus       100 ~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~-------~~~~~~~  169 (258)
T cd05078         100 SWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE-------ILLERIP  169 (258)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccccCCch-------hccccCC
Confidence            456778999999999999   999999999999999987765        5899999876543221       1467889


Q ss_pred             ccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChh
Q 039895          166 FMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPE  244 (284)
Q Consensus       166 y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
                      |+|||++.+. .++.++|||||||++|++++|..++....    .   .............++                 
T Consensus       170 y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~----~---~~~~~~~~~~~~~~~-----------------  225 (258)
T cd05078         170 WVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL----D---SQKKLQFYEDRHQLP-----------------  225 (258)
T ss_pred             ccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc----c---HHHHHHHHHccccCC-----------------
Confidence            9999998764 57899999999999999999964433211    0   111111000000000                 


Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          245 KEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       245 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                       ......+.+++.+||+.+|++|||+.++++.|+
T Consensus       226 -~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         226 -APKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             -CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence             011234789999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-34  Score=232.97  Aligned_cols=192  Identities=21%  Similarity=0.289  Sum_probs=152.4

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------CCCc--
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------FPFS--   93 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------~~~~--   93 (284)
                      |+...+||+|+||.||++.+  .|+.||+|.+...                                       ||.-  
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS  114 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS  114 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence            44456899999999999998  8999999987654                                       3332  


Q ss_pred             --------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           94 --------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        94 --------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                    .....++...+.||+|||   ...-+|||||..|||++.+|.+||+|||.|-.+.+....   ..+
T Consensus       115 iSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK---RNT  188 (502)
T KOG0574|consen  115 ISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK---RNT  188 (502)
T ss_pred             HHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh---hCc
Confidence                          445568889999999999   889999999999999999999999999999887655433   234


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      +.|||.|||||++..-.|+.++||||+|++..||..|++|+.....                    ...++-  +...+.
T Consensus       189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP--------------------MRAIFM--IPT~PP  246 (502)
T KOG0574|consen  189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP--------------------MRAIFM--IPTKPP  246 (502)
T ss_pred             cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc--------------------cceeEe--ccCCCC
Confidence            7899999999999999999999999999999999999999865331                    011110  011112


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      +-+..++.-+.++.+++..||-.+|++|-|+.++++.
T Consensus       247 PTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  247 PTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             CCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            2223355666778999999999999999999988764

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.9e-32  Score=228.12  Aligned_cols=199  Identities=23%  Similarity=0.339  Sum_probs=147.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|+..+.||.|+||+||+|..  ++..+|+|++...                                          +
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4688889999999999999998  7789999988643                                          1


Q ss_pred             C------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           91 P------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |                  .+.....++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++..+.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            1                  11234578999999999999   99999999999999999999999999999877654432


Q ss_pred             cc-cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          153 HI-NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       153 ~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .. .......|+..|+|||++... .++.++|+|||||++|+|++|..||.....    .    ..........      
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~----~----~~~~~~~~~~------  223 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP----M----KVLMLTLQND------  223 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh----h----hhHHHHhcCC------
Confidence            21 111225689999999998776 788999999999999999999999864321    0    0111111110      


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+.+...     ......+..+.+++.+||+.+|++|||+.+++.
T Consensus       224 ~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         224 PPSLETG-----ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             CCCcCCc-----cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            0000000     001123445789999999999999999999975

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=6.8e-32  Score=230.96  Aligned_cols=189  Identities=23%  Similarity=0.302  Sum_probs=143.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ..|+..+.||+|+||.||+|..  +++.||+|++...                                           
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            4477778999999999999998  7899999987532                                           


Q ss_pred             -CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       ++               .......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.......  
T Consensus        95 e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~--  169 (307)
T cd06607          95 EYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN--  169 (307)
T ss_pred             HhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC--
Confidence             11               00445678999999999999   9999999999999999999999999999986654322  


Q ss_pred             ccCCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                           ...+++.|+|||++.   ...++.++||||||+++||+++|..||....        ........... ....  
T Consensus       170 -----~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~--------~~~~~~~~~~~-~~~~--  233 (307)
T cd06607         170 -----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQN-DSPT--  233 (307)
T ss_pred             -----CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc--------HHHHHHHHhcC-CCCC--
Confidence                 146788999999874   3568899999999999999999999986432        11111111100 0000  


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                         +         ........+.+++.+||+.+|++||++.+|+..
T Consensus       234 ---~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         234 ---L---------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             ---C---------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence               0         011233458899999999999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4e-32  Score=230.83  Aligned_cols=188  Identities=18%  Similarity=0.286  Sum_probs=141.9

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CCC-----
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FPF-----   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~~-----   92 (284)
                      ..||+|+||.||++..  ++..||+|.+...                                         ++.     
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            5799999999999998  7889999987543                                         111     


Q ss_pred             ---------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccC
Q 039895           93 ---------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGT  163 (284)
Q Consensus        93 ---------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt  163 (284)
                               ......++.||+.||.|||   +.+|+||||||+||+++.++.++|+|||++.........   .....|+
T Consensus       108 ~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~  181 (292)
T cd06658         108 DIVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKSLVGT  181 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc---CceeecC
Confidence                     1456789999999999999   999999999999999999999999999998765432211   1225688


Q ss_pred             ccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCCh
Q 039895          164 FGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWP  243 (284)
Q Consensus       164 ~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
                      ..|+|||++.+..++.++||||||+++||+++|..||....     .   ........ .     ...+....       
T Consensus       182 ~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~---~~~~~~~~-~-----~~~~~~~~-------  240 (292)
T cd06658         182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP-----P---LQAMRRIR-D-----NLPPRVKD-------  240 (292)
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H---HHHHHHHH-h-----cCCCcccc-------
Confidence            99999999988889999999999999999999999986432     1   11111110 0     00111100       


Q ss_pred             hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          244 EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       244 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                       .......+.+++..||..+|++|||+.++++.
T Consensus       241 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         241 -SHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             -ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence             11122347789999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=7.3e-32  Score=227.41  Aligned_cols=191  Identities=24%  Similarity=0.313  Sum_probs=146.3

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~   91 (284)
                      .|+..+.||+|+||.||+|.+  ++..||+|++...                                          ++
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            456677899999999999998  6889999987643                                          11


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||+|||   +.+++|+||+|+||+++.++.++++|||++.........   .
T Consensus        85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~---~  158 (277)
T cd06640          85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---R  158 (277)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc---c
Confidence                          11445678999999999999   999999999999999999999999999998766433211   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....++..|+|||++.+..++.++|+|||||++|||++|..|+....     ......   . ......           
T Consensus       159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-----~~~~~~---~-~~~~~~-----------  218 (277)
T cd06640         159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH-----PMRVLF---L-IPKNNP-----------  218 (277)
T ss_pred             ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC-----hHhHhh---h-hhcCCC-----------
Confidence            12467889999999988889999999999999999999999986432     000000   0 000000           


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                          .......+..+.+++.+||+.+|++||++.+++..
T Consensus       219 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         219 ----PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             ----CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence                01123345568899999999999999999999765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=3.6e-32  Score=229.60  Aligned_cols=185  Identities=21%  Similarity=0.269  Sum_probs=138.1

Q ss_pred             eeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------------CC-
Q 039895           62 VIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------------FP-   91 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------------~~-   91 (284)
                      +||+|+||.||++..  +++.+|+|.+...                                               ++ 
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999998  6889999987532                                               11 


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||.|||   +.+|+|+||||+|||++.++.++|+|||++........     
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~-----  152 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-----  152 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-----
Confidence                          00456678999999999999   99999999999999999999999999999865543221     


Q ss_pred             CCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....|++.|+|||.+.. ..++.++|||||||+++++++|..||.....  ..   .. ........      ....   
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~---~~-~~~~~~~~------~~~~---  217 (279)
T cd05633         153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--KD---KH-EIDRMTLT------VNVE---  217 (279)
T ss_pred             cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC--cC---HH-HHHHHhhc------CCcC---
Confidence            12468999999998864 5688999999999999999999999864321  11   11 11111000      0000   


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAKQ  276 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~~  276 (284)
                             .+...+..+.+++.+||+.||++||     |+.++++.
T Consensus       218 -------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         218 -------LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             -------CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence                   0112334578999999999999999     58888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=9.6e-32  Score=225.26  Aligned_cols=192  Identities=23%  Similarity=0.350  Sum_probs=143.9

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |.....||+|++|.||+|..  ++..+|+|.+...                                             
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            56678999999999999998  6789999977532                                             


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           ++.               ......++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||.++....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence                 110               0345679999999999999   99999999999999999999999999999887653


Q ss_pred             CCccc---cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          150 GETHI---NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       150 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      .....   .......|+..|+|||.+.+..++.++|||||||++|++++|..||....       ... .+.... ..  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~-~~~~~~-~~--  227 (267)
T cd06628         159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT-------QLQ-AIFKIG-EN--  227 (267)
T ss_pred             ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc-------HHH-HHHHHh-cc--
Confidence            22111   11112457889999999988889999999999999999999999986422       011 111100 00  


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                         ..+.+          +...+..+.+++.+||+.+|++||++.+|++
T Consensus       228 ---~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         228 ---ASPEI----------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             ---CCCcC----------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence               00110          1122344789999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.98  E-value=6.7e-32  Score=228.35  Aligned_cols=210  Identities=18%  Similarity=0.232  Sum_probs=145.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+....||+|+||.||+|..  +|+.||+|++...                                           
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            3577788999999999999998  6899999987532                                           


Q ss_pred             CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      ++               .+..+..++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++......... 
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-  156 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD-  156 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCccc-
Confidence            11               11457789999999999999   899999999999999999999999999999876543321 


Q ss_pred             cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh----------c
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE----------N  223 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~  223 (284)
                        .....++..|+|||++.+ ..++.++||||||+++|+|++|..||.....    .............          .
T Consensus       157 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07847         157 --YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD----VDQLYLIRKTLGDLIPRHQQIFST  230 (286)
T ss_pred             --ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCChHHhhhccc
Confidence              112457889999998865 4578999999999999999999999864321    0111111110000          0


Q ss_pred             Ccc-cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 ESF-KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..+ .....+....... ...........+.+++.+||+.+|++|||+.|++.
T Consensus       231 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         231 NQFFKGLSIPEPETREP-LESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             ccccccccCCCcccccC-HHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            000 0000000000000 00000112345789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.98  E-value=1.1e-31  Score=224.27  Aligned_cols=194  Identities=21%  Similarity=0.230  Sum_probs=148.1

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|+..+.||.|+||.||++..  ++..||+|.+...                                            
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            366778999999999999998  7789999988532                                            


Q ss_pred             -CCCc-------------------hhHHHHHHHHHHHHHHhccCC--CCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 -FPFS-------------------VSKLKIAIEIASAVAYLHVGF--SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 -~~~~-------------------~~~~~i~~~i~~gL~~LH~~~--~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                       +|..                   ...+.++.|++.||.|||..+  +.+++|+||+|+||+++.++.++|+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence             1110                   345678999999999999554  678999999999999999999999999999877


Q ss_pred             CCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      .......   ....+++.|+|||++....++.++||||||++++++++|..|+....        ...... ........
T Consensus       161 ~~~~~~~---~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~-~~~~~~~~  228 (265)
T cd08217         161 GHDSSFA---KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--------QLQLAS-KIKEGKFR  228 (265)
T ss_pred             cCCcccc---cccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--------HHHHHH-HHhcCCCC
Confidence            5433211   12468999999999988889999999999999999999999986432        111111 11111111


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .               .+......+.+++.+||+.+|++|||+.+|++.
T Consensus       229 ~---------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         229 R---------------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             C---------------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            1               111233457899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.98  E-value=4.1e-32  Score=232.29  Aligned_cols=214  Identities=15%  Similarity=0.186  Sum_probs=145.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|+..+.||+|+||.||+|..  ++..||+|.+...                                          
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            45688889999999999999998  7899999987432                                          


Q ss_pred             ---------CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           90 ---------FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        90 ---------~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                               +|               .......++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.
T Consensus        91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  167 (310)
T cd07865          91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLAR  167 (310)
T ss_pred             CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence                     00               01455679999999999999   8999999999999999999999999999997


Q ss_pred             ccCCCCccc-cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh-
Q 039895          146 SIPEGETHI-NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE-  222 (284)
Q Consensus       146 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-  222 (284)
                      ......... .......++..|+|||.+.+. .++.++||||||+++|||++|..||....     .......+..... 
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~-----~~~~~~~~~~~~~~  242 (310)
T cd07865         168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT-----EQHQLTLISQLCGS  242 (310)
T ss_pred             cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCC
Confidence            664332211 111224578899999987654 47889999999999999999998886432     1111111111110 


Q ss_pred             --cCccccccccc------ccCCCCCCChh---hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 --NESFKEIVDPA------IVGEEGLMWPE---KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 --~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        ...++......      .........+.   .......+.+++.+||+.||++|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence              00000000000      00000000000   0001234678999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.98  E-value=8.3e-32  Score=229.26  Aligned_cols=195  Identities=23%  Similarity=0.340  Sum_probs=144.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+  +++.||||.+...                                          
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            35677889999999999999999  4899999998643                                          


Q ss_pred             -CC---------------CchhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FP---------------FSVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~---------------~~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       ++               ....+..++.|++.||+|||   + .+|+||||+|+||++++++.++|+|||++..+.....
T Consensus        94 e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          94 ELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA  170 (296)
T ss_pred             eccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence             00               00334579999999999999   6 5999999999999999999999999999876643322


Q ss_pred             cccCCCCcccCccccccccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGD----FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ..    ...++..|+|||.+.+..    ++.++||||||+++|+|++|+.||....      .. .......... ....
T Consensus       171 ~~----~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~-~~~~~~~~~~-~~~~  238 (296)
T cd06618         171 KT----RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK------TE-FEVLTKILQE-EPPS  238 (296)
T ss_pred             cc----CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch------hH-HHHHHHHhcC-CCCC
Confidence            11    135788999999987553    7889999999999999999999985321      00 1111111111 1000


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .             +........+.+++.+||+.+|++|||+.+++..
T Consensus       239 ~-------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         239 L-------------PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             C-------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0             0001123347899999999999999999999754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.98  E-value=7.2e-32  Score=227.19  Aligned_cols=148  Identities=22%  Similarity=0.343  Sum_probs=109.0

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-------cceeeccccccccCCCCccccCCCCcccCccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-------VAQLFDFTLSLSIPEGETHINDSNRVIGTFGF  166 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  166 (284)
                      ..++.++.||+.||+|||   +.+|+||||||+|||++..+       .++++|||++........       ..++..|
T Consensus       117 ~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~-------~~~~~~~  186 (274)
T cd05076         117 AWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREE-------RVERIPW  186 (274)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccc-------cccCCcc
Confidence            556789999999999999   99999999999999998654       379999998755432211       3567889


Q ss_pred             cccccccC-CCCCcchhHHHHHHHHHHHH-hCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChh
Q 039895          167 MAPEYRTT-GDFSEKSDVYSFGALLLELL-TGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPE  244 (284)
Q Consensus       167 ~aPE~~~~-~~~~~~~DvwS~G~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
                      +|||.+.+ ..++.++|||||||++||++ +|..||....     .........   .....+.                
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~---~~~~~~~----------------  242 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT-----PSEKERFYE---KKHRLPE----------------  242 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC-----hHHHHHHHH---hccCCCC----------------
Confidence            99998865 46889999999999999985 6888875432     011111110   0000000                


Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          245 KEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       245 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                        .....+.+++.+||+.+|++|||+.+|++.|
T Consensus       243 --~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         243 --PSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             --CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence              0112378999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=3.4e-32  Score=235.81  Aligned_cols=217  Identities=17%  Similarity=0.183  Sum_probs=150.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||+||+|..  ++..||+|.+...                                          
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            35688888999999999999998  7899999987542                                          


Q ss_pred             ------CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ------FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ------~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                            ++              .......++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.....
T Consensus        84 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          84 VYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             EEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence                  00              01345678999999999999   99999999999999999999999999999977644


Q ss_pred             CCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---c
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---S  225 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~  225 (284)
                      ....   .....++..|+|||.+.. ..++.++|||||||++|+|++|..||....     ...............   .
T Consensus       161 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07858         161 KGDF---MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD-----YVHQLKLITELLGSPSEED  232 (337)
T ss_pred             Cccc---ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC-----hHHHHHHHHHHhCCCChHH
Confidence            3211   112467889999998764 468899999999999999999999986432     011111111111000   0


Q ss_pred             ccccccccc-------cCCCCCC-ChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH--HHHHH
Q 039895          226 FKEIVDPAI-------VGEEGLM-WPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ--LRQIY  281 (284)
Q Consensus       226 ~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~--L~~l~  281 (284)
                      +..+.+...       ....... ..........+.+++.+||+.+|++|||+.++++.  +..+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            000000000       0000000 00011234557899999999999999999999876  55443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.98  E-value=6.5e-32  Score=226.54  Aligned_cols=157  Identities=24%  Similarity=0.386  Sum_probs=117.2

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-----cceeeccccccccCCCCccccCCCCcccCcccccc
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-----VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAP  169 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  169 (284)
                      ..+.++.|++.||.|||   +.+++|+||+|+||+++.++     .++++|||++............ ....++..|+||
T Consensus       107 ~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~y~aP  182 (269)
T cd05044         107 ELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKE-GEGLLPVRWMAP  182 (269)
T ss_pred             HHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccC-cccCCCccccCH
Confidence            34568999999999999   89999999999999999877     8999999998766433222111 113457889999


Q ss_pred             ccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHH
Q 039895          170 EYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQ  248 (284)
Q Consensus       170 E~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (284)
                      |++.+..++.++|||||||++|||++ |..||....     .......    ...+...               ......
T Consensus       183 E~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~-----~~~~~~~----~~~~~~~---------------~~~~~~  238 (269)
T cd05044         183 ESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN-----NQEVLQH----VTAGGRL---------------QKPENC  238 (269)
T ss_pred             HHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC-----HHHHHHH----HhcCCcc---------------CCcccc
Confidence            99998899999999999999999998 888875322     1111111    1111000               011223


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          249 LLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       249 ~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      +..+.+++.+||+.+|++||++.+|++.|++
T Consensus       239 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         239 PDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             hHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            3457899999999999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.98  E-value=3.9e-32  Score=227.31  Aligned_cols=195  Identities=22%  Similarity=0.310  Sum_probs=146.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|+..+.||+|++|.||++..  +++.||+|.+...                                          +
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            3566778999999999999999  6889999987644                                          1


Q ss_pred             CC----------------chhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 PF----------------SVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~~----------------~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      |.                ......++.|++.||.|||   + .+++|+||+|+||+++.++.++|+|||.+.........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  157 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK  157 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence            11                0344578999999999999   8 99999999999999999999999999998665432211


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .     ..++..|+|||.+.+..++.++||||||+++|++++|..||.....   ................. ..     
T Consensus       158 ~-----~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~-~~-----  223 (265)
T cd06605         158 T-----FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEND---PPDGIFELLQYIVNEPP-PR-----  223 (265)
T ss_pred             c-----ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccc---ccccHHHHHHHHhcCCC-CC-----
Confidence            1     4678899999999888999999999999999999999999864321   11112222222211110 00     


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +        + .......+.+++.+||..+|++|||+.+++.
T Consensus       224 ~--------~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         224 L--------P-SGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             C--------C-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            0        0 0113445889999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.98  E-value=4.6e-32  Score=232.21  Aligned_cols=211  Identities=15%  Similarity=0.174  Sum_probs=147.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|+..+.||+|+||.||+|..  +|..||+|++...                                          
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            46788899999999999999998  7899999988532                                          


Q ss_pred             ---CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|.               +.....++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.......
T Consensus        86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~  162 (309)
T cd07845          86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA  162 (309)
T ss_pred             EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence               110               0345679999999999999   9999999999999999999999999999998765432


Q ss_pred             ccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFK  227 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  227 (284)
                      ..   .....+++.|+|||++.+ ..++.++||||+||++|||++|..||....     .......+.......   .++
T Consensus       163 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~  234 (309)
T cd07845         163 KP---MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS-----EIEQLDLIIQLLGTPNESIWP  234 (309)
T ss_pred             CC---CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCChhhch
Confidence            11   111345788999998865 457899999999999999999999986432     111111111111100   000


Q ss_pred             ccccc------cccCCCCCCChh-hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          228 EIVDP------AIVGEEGLMWPE-KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       228 ~~~~~------~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..-+.      .+.......... .......+.+++.+||+.||++|||+.|++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00000      000000000000 0112445779999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=5.1e-32  Score=229.27  Aligned_cols=193  Identities=19%  Similarity=0.282  Sum_probs=142.7

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~   91 (284)
                      +|+..+.||+|+||.||++..  +|..||+|.+...                                          +|
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            566778999999999999999  6899999987542                                          11


Q ss_pred             C------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           92 F------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ~------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      .                  ......++.|++.||.|||+  ..+|+|+||||+||+++.++.++|+|||++..+..... 
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-  158 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA-  158 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc-
Confidence            1                  03457889999999999993  25999999999999999999999999999876543222 


Q ss_pred             ccCCCCcccCccccccccccCC------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                          ....+++.|+|||.+.+.      .++.++|||||||++|++++|..||....     ............ .....
T Consensus       159 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~-~~~~~  228 (286)
T cd06622         159 ----KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET-----YANIFAQLSAIV-DGDPP  228 (286)
T ss_pred             ----ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc-----hhhHHHHHHHHh-hcCCC
Confidence                124578899999987544      35789999999999999999999986432     111111111111 11100


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .               .+......+.+++.+||+.+|++||++.++++.
T Consensus       229 ~---------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         229 T---------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             C---------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            0               112234457899999999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.98  E-value=6.4e-32  Score=231.75  Aligned_cols=145  Identities=23%  Similarity=0.349  Sum_probs=118.0

Q ss_pred             CCCCCeeeecCCceEEEEEe----CCcceEEEeecCC-------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL----QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-------------------------------------------   89 (284)
                      |...+.||+|+||.||+|..    .+..||+|.+...                                           
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            66678899999999999999    4689999998761                                           


Q ss_pred             ---CCC-------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec----CCcceeecccc
Q 039895           90 ---FPF-------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE----ENVAQLFDFTL  143 (284)
Q Consensus        90 ---~~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~----~~~~kl~Dfg~  143 (284)
                         +|.                   ......++.|++.||.|||   +.+|+||||||+||+++.    ++.+||+|||+
T Consensus        82 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~  158 (316)
T cd07842          82 LFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGL  158 (316)
T ss_pred             EEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence               110                   0234578999999999999   999999999999999999    89999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                      +.................+++.|+|||++.+. .++.++|||||||++++|++|..||....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~  220 (316)
T cd07842         159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE  220 (316)
T ss_pred             ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence            98765433222222235678999999987664 57899999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.98  E-value=8.5e-32  Score=227.66  Aligned_cols=203  Identities=18%  Similarity=0.207  Sum_probs=143.5

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..+.||.|++|.||+|..  +|..||||++...                                           +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            477788999999999999998  7899999988632                                           1


Q ss_pred             CC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 PF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +.                ......++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++..........
T Consensus        81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  157 (284)
T cd07860          81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY  157 (284)
T ss_pred             cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc
Confidence            10                0345678999999999999   9999999999999999999999999999987654322111


Q ss_pred             cCCCCcccCccccccccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---------
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---------  224 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------  224 (284)
                         ....+++.|+|||++.+.. ++.++|||||||++|+++||+.||....    ................         
T Consensus       158 ---~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07860         158 ---THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS----EIDQLFRIFRTLGTPDEVVWPGVTS  230 (284)
T ss_pred             ---ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHHHhCCCChhhhhhhhH
Confidence               1135688999999876644 6889999999999999999999986432    1111111111100000         


Q ss_pred             ------cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 ------SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            .+..+....+.       .........+.+++.+||+.||++|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         231 LPDYKPSFPKWARQDFS-------KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHHhhcccccccCHH-------HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence                  00000000000       000112334779999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.98  E-value=1.1e-31  Score=226.61  Aligned_cols=206  Identities=16%  Similarity=0.188  Sum_probs=143.5

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||.||+|..  ++..||+|++...                                             
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            44567899999999999998  7889999988643                                             


Q ss_pred             CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      ++               .......++.|++.||.|||   +.+++|+||+|+||+++. +.+||+|||++......... 
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~-  155 (282)
T cd07831          81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY-  155 (282)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc-
Confidence            00               00456779999999999999   999999999999999999 99999999999776433221 


Q ss_pred             cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--c-----
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--F-----  226 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----  226 (284)
                         ....++..|+|||++.. ..++.++|||||||++|||++|..||....     ................  +     
T Consensus       156 ---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  227 (282)
T cd07831         156 ---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN-----ELDQIAKIHDVLGTPDAEVLKKFR  227 (282)
T ss_pred             ---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC-----HHHHHHHHHHHcCCCCHHHHHhhc
Confidence               11457889999997644 457889999999999999999999986432     1111111111110000  0     


Q ss_pred             -cccccccccCCCC-CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 -KEIVDPAIVGEEG-LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ....+........ ...+.....+..+.+++.+||+.+|++|||+.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence             0000000000000 000111234567899999999999999999999975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.98  E-value=1.4e-31  Score=224.26  Aligned_cols=197  Identities=18%  Similarity=0.290  Sum_probs=146.1

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|+..+.||+|++|.||+|..  ++..||+|++...                                            
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            477889999999999999997  8899999988632                                            


Q ss_pred             ---CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCCC
Q 039895           90 ---FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ---~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~  150 (284)
                         ++               .+.....++.|++.||.|||   +.+++|+||+|+||+++.++ .++|+|||.+......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~  157 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK  157 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence               01               01445678999999999999   99999999999999998776 5899999998776543


Q ss_pred             Ccccc-CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHIN-DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ..... ......|+..|+|||.+.+..++.++||||+|++++++++|..||.....     ................   
T Consensus       158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~---  229 (268)
T cd06630         158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH-----SNHLALIFKIASATTA---  229 (268)
T ss_pred             cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-----cchHHHHHHHhccCCC---
Confidence            22111 11225688999999999888899999999999999999999999853321     1111111111000000   


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  ...+......+.+++.+||..+|++|||+.++++
T Consensus       230 ------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         230 ------------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             ------------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence                        0112233445789999999999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.98  E-value=8.3e-33  Score=223.69  Aligned_cols=149  Identities=23%  Similarity=0.321  Sum_probs=122.3

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe----C--CcceEEEeecCC---------CCCc-----------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL----Q--DRPISVMKFEDT---------FPFS-----------------------   93 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~----~--~~~vavK~~~~~---------~~~~-----------------------   93 (284)
                      +....|+....||+|.||.||+|.-    +  ...+|+|+++..         .|-+                       
T Consensus        21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d  100 (438)
T KOG0666|consen   21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD  100 (438)
T ss_pred             HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence            3345677788999999999999966    2  237999999765         0100                       


Q ss_pred             -------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC----Cccee
Q 039895           94 -------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE----NVAQL  138 (284)
Q Consensus        94 -------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl  138 (284)
                                                     ....+|+.||+.|+.|||   ++=|+||||||.|||+..+    |.+||
T Consensus       101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI  177 (438)
T KOG0666|consen  101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI  177 (438)
T ss_pred             ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence                                           455689999999999999   9999999999999999877    89999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      +|||+++.+...-........++-|.+|+|||.+.+. .|+.+.||||+|||+.||+|-.+.|.+.
T Consensus       178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~  243 (438)
T KOG0666|consen  178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR  243 (438)
T ss_pred             ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence            9999999987654433333336789999999998876 5899999999999999999999888654

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.98  E-value=9.4e-32  Score=224.79  Aligned_cols=195  Identities=26%  Similarity=0.376  Sum_probs=145.4

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCC------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPF------------------------------------------   92 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------------------------------------------   92 (284)
                      |...+.||+|+||.||+|..  +++.||+|.+......                                          
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            66778999999999999998  7889999998754111                                          


Q ss_pred             ----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           93 ----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        93 ----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                      ......++.+++.||.|||   +.+|+|+||+|+||+++.++.+||+|||++............
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~  158 (264)
T cd06626          82 SGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE  158 (264)
T ss_pred             CCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence                            1445678999999999999   999999999999999999999999999998876544332221


Q ss_pred             -CCCcccCccccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          157 -SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       157 -~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                       .....+++.|+|||++....   ++.++||||||+++|++++|..||....      .... ...... ....     +
T Consensus       159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~------~~~~-~~~~~~-~~~~-----~  225 (264)
T cd06626         159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD------NEFQ-IMFHVG-AGHK-----P  225 (264)
T ss_pred             cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc------chHH-HHHHHh-cCCC-----C
Confidence             11246788999999988766   8899999999999999999999986432      0111 111100 0100     0


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+        +........+.+++.+||+.+|++|||+.+++.
T Consensus       226 ~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         226 PI--------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CC--------CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00        111122344779999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.98  E-value=2.2e-31  Score=221.63  Aligned_cols=192  Identities=26%  Similarity=0.370  Sum_probs=144.1

Q ss_pred             CCCCCeeeecCCceEEEEEeC--C----cceEEEeecCCC----------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFLQ--D----RPISVMKFEDTF----------------------------------------   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~~--~----~~vavK~~~~~~----------------------------------------   90 (284)
                      |...+.||.|+||.||++...  +    ..||+|.+....                                        
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            345678999999999999993  2    789999987541                                        


Q ss_pred             -------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           91 -------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 -------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                         ........++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence                               111345678999999999999   9999999999999999999999999999998776543


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .....  ...+++.|+|||.+.+..++.++||||+|++++++++ |..||....        ......... ......  
T Consensus       158 ~~~~~--~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~~-~~~~~~--  224 (258)
T smart00219      158 YYKKK--GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS--------NEEVLEYLK-KGYRLP--  224 (258)
T ss_pred             ccccc--cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHh-cCCCCC--
Confidence            32221  1336789999999988889999999999999999998 666664321        111111111 111100  


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                                   .....+..+.+++.+||..+|++|||+.|+++.|
T Consensus       225 -------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      225 -------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             -------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence                         0111334588999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.98  E-value=1.5e-31  Score=228.63  Aligned_cols=199  Identities=21%  Similarity=0.228  Sum_probs=144.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..  .++.||+|.+...                                           
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            4678889999999999999998  6789999987643                                           


Q ss_pred             -CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       ++               .+.....++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||+++........
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence             11               00345678899999999999   999999999999999999999999999988642111000


Q ss_pred             ------------ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh
Q 039895          154 ------------INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI  221 (284)
Q Consensus       154 ------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  221 (284)
                                  ........++..|+|||.+....++.++|||||||++||+++|..||.+..        .........
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~--------~~~~~~~~~  229 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT--------PEELFGQVI  229 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH
Confidence                        001112457889999999988889999999999999999999999986432        111111111


Q ss_pred             hcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          222 ENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      .. ...   .+..          ....+..+.+++.+||+.+|++||++.++.+.|+
T Consensus       230 ~~-~~~---~~~~----------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         230 SD-DIE---WPEG----------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             hc-ccC---CCCc----------cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence            11 000   0000          0122334789999999999999999765555554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.98  E-value=1.7e-31  Score=226.10  Aligned_cols=191  Identities=18%  Similarity=0.264  Sum_probs=143.3

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC--
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP--   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~--   91 (284)
                      |...+.||+|++|.||++..  ++..+++|++...                                         ++  
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44457999999999999987  7789999987422                                         11  


Q ss_pred             ------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           92 ------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        92 ------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                  ....+..++.|++.||+|||   +.+++||||+|+||+++.++.++|+|||.+.........   ...
T Consensus       101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~---~~~  174 (285)
T cd06648         101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR---RKS  174 (285)
T ss_pred             CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc---ccc
Confidence                        01345679999999999999   999999999999999999999999999988655432211   112


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      ..|++.|+|||.+.+..++.++||||||+++|++++|..||....        .......... .......         
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~--------~~~~~~~~~~-~~~~~~~---------  236 (285)
T cd06648         175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP--------PLQAMKRIRD-NLPPKLK---------  236 (285)
T ss_pred             ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHh-cCCCCCc---------
Confidence            468899999999988889999999999999999999999986422        1111111111 1000000         


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          .....+..+.+++.+||+.+|++|||+.++++
T Consensus       237 ----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         237 ----NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             ----ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence                01112335889999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.98  E-value=5.9e-32  Score=229.82  Aligned_cols=211  Identities=17%  Similarity=0.158  Sum_probs=143.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|.+  +++.||+|++...                                           
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            4688889999999999999998  7899999986532                                           


Q ss_pred             ------CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeecccc
Q 039895           90 ------FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTL  143 (284)
Q Consensus        90 ------~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~  143 (284)
                            +|                   .......++.||+.||.|||   +.+|+||||+|+||+++. ++.++|+|||+
T Consensus        81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~  157 (295)
T cd07837          81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGL  157 (295)
T ss_pred             EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeeccc
Confidence                  00                   11345678999999999999   999999999999999998 88999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      +..+......   .....+++.|+|||++.+ ..++.++||||||+++|+|++|..||....    ....+.........
T Consensus       158 ~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~----~~~~~~~~~~~~~~  230 (295)
T cd07837         158 GRAFSIPVKS---YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS----ELQQLLHIFKLLGT  230 (295)
T ss_pred             ceecCCCccc---cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHHHhCC
Confidence            8765332111   111356888999998765 457899999999999999999999886432    11111111110000


Q ss_pred             c--CcccccccccccCCCCCCCh-----hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 N--ESFKEIVDPAIVGEEGLMWP-----EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .  ..+................+     ........+.+++.+||+.+|++|||+.|++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0  00000000000000000000     01123445789999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.98  E-value=2.8e-31  Score=224.57  Aligned_cols=208  Identities=17%  Similarity=0.196  Sum_probs=145.8

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |+..+.||+|+||.||+|..  ++..||+|++...                                             
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            45667899999999999999  5899999998621                                             


Q ss_pred             ------CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 ------FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 ------~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                            ++                ....+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++...
T Consensus        81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~  157 (287)
T cd07838          81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIY  157 (287)
T ss_pred             eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence                  00                01445679999999999999   899999999999999999999999999998776


Q ss_pred             CCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--  225 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--  225 (284)
                      .......    ...++..|+|||++.+..++.++|||||||++|+|++|..||....    ....+............  
T Consensus       158 ~~~~~~~----~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  229 (287)
T cd07838         158 SFEMALT----SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS----EADQLDKIFDVIGLPSEEE  229 (287)
T ss_pred             cCCcccc----cccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC----hHHHHHHHHHHcCCCChHh
Confidence            4432211    1357889999999998889999999999999999999988876432    11111111111100000  


Q ss_pred             ccccc---cccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIV---DPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +....   ...........+ .........+.+++.+||+.||++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            00000   000000000000 011233456789999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=7.9e-32  Score=227.47  Aligned_cols=194  Identities=22%  Similarity=0.247  Sum_probs=144.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ++|...+.||.|+||.||+|..  ++..+|+|.+...                                         ++
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            4577778899999999999998  6889999998543                                         11


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      .......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.........  
T Consensus        85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~--  159 (280)
T cd06611          85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK--  159 (280)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc--
Confidence                            11456779999999999999   999999999999999999999999999988665432211  


Q ss_pred             CCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          156 DSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                       .....|++.|+|||++.     ...++.++||||||+++|+|++|..||....        ........ .........
T Consensus       160 -~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~--------~~~~~~~~-~~~~~~~~~  229 (280)
T cd06611         160 -RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN--------PMRVLLKI-LKSEPPTLD  229 (280)
T ss_pred             -cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC--------HHHHHHHH-hcCCCCCcC
Confidence             12256899999999874     3457789999999999999999999986432        11111111 111110000


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                   .+......+.+++.+||+.+|++||++.++++.
T Consensus       230 -------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         230 -------------QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             -------------CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence                         011223347899999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=6.1e-32  Score=228.69  Aligned_cols=200  Identities=24%  Similarity=0.306  Sum_probs=146.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|+..+.||+|+||+||++..  +|..||+|++...                                          +
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4566678999999999999998  6889999987533                                          1


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      +..               .....++.+++.||.|||+  ..+++|+||+|+||+++.++.++|+|||++........   
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~---  159 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA---  159 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc---
Confidence            100               3456789999999999993  26899999999999999999999999998865432211   


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC---ccccHHHHHHHHhhcCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDG---EDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                        ....|+..|+|||++.+..++.++|||||||++|++++|..||........   ................      .+
T Consensus       160 --~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  231 (284)
T cd06620         160 --DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------PP  231 (284)
T ss_pred             --CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------CC
Confidence              125689999999999888899999999999999999999999875431111   1111112222111110      00


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .+        + ....+..+.+++.+||+.||++|||+.|++++
T Consensus       232 ~~--------~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         232 RL--------P-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             CC--------C-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            00        0 11233457899999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=6.6e-32  Score=229.19  Aligned_cols=142  Identities=18%  Similarity=0.310  Sum_probs=115.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|...+.||+|++|.||+|..  +++.||+|.+...                                          +
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            5677888999999999999998  7899999987532                                          1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      +.               ......++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||+++........  
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--  159 (291)
T cd07844          85 LDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT--  159 (291)
T ss_pred             CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc--
Confidence            10               1345678899999999999   999999999999999999999999999998654322111  


Q ss_pred             CCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 039895          156 DSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~  202 (284)
                       .....++..|+|||++.+ ..++.++||||+|+++|+|++|..||..
T Consensus       160 -~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~  206 (291)
T cd07844         160 -YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG  206 (291)
T ss_pred             -ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence             111346888999998865 4588999999999999999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.2e-31  Score=233.08  Aligned_cols=222  Identities=17%  Similarity=0.233  Sum_probs=154.2

Q ss_pred             cceecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------
Q 039895           42 IRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------   89 (284)
Q Consensus        42 ~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------   89 (284)
                      ++.....++..+.++|...+.||+|+||.||+|..  ++..||+|++...                              
T Consensus         4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~   83 (345)
T cd07877           4 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD   83 (345)
T ss_pred             chhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence            44555677778889999999999999999999987  7899999988642                              


Q ss_pred             C--------------------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcce
Q 039895           90 F--------------------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ  137 (284)
Q Consensus        90 ~--------------------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k  137 (284)
                      .                                .....+..++.|++.||+|||   +.+|+||||||+||+++.++.++
T Consensus        84 ~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          84 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             eeeecccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEE
Confidence            0                                000345668999999999999   99999999999999999999999


Q ss_pred             eeccccccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHH
Q 039895          138 LFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL  216 (284)
Q Consensus       138 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~  216 (284)
                      |+|||++.......      ....++..|+|||++.+ ..++.++|||||||++|++++|..||....    ....+...
T Consensus       161 l~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~----~~~~~~~~  230 (345)
T cd07877         161 ILDFGLARHTDDEM------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD----HIDQLKLI  230 (345)
T ss_pred             Eecccccccccccc------cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH
Confidence            99999987653322      12467889999998765 468899999999999999999999985422    10111111


Q ss_pred             HHHHhhc-Cc-ccccccc-------cccCCCCCCChh-hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          217 VKKYIEN-ES-FKEIVDP-------AIVGEEGLMWPE-KEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       217 ~~~~~~~-~~-~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ....... .. ...+.+.       .+.......+.. .......+.+++.+||+.+|.+|||+.+++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            1100000 00 0000000       000000000000 00123347899999999999999999998753

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=1.2e-31  Score=232.08  Aligned_cols=213  Identities=15%  Similarity=0.245  Sum_probs=149.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC-----------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF-----------------------------------------   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----------------------------------------   90 (284)
                      .++|+..+.||+|+||.||+|..  +|..||+|++....                                         
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            36788889999999999999998  78999999876430                                         


Q ss_pred             ------C--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           91 ------P--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        91 ------~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                            +              .......++.||+.||.|||   ..+|+||||||+||+++.++.+||+|||++......
T Consensus        84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  160 (334)
T cd07855          84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS  160 (334)
T ss_pred             EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence                  0              01456788999999999999   899999999999999999999999999998766433


Q ss_pred             Cccc-cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC----
Q 039895          151 ETHI-NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE----  224 (284)
Q Consensus       151 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----  224 (284)
                      .... .......|+..|+|||.+.. ..++.++|||||||++|||++|..||.....     ......+.......    
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~-----~~~~~~~~~~~g~~~~~~  235 (334)
T cd07855         161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY-----VHQLKLILSVLGSPSEEV  235 (334)
T ss_pred             CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh-----HHHHHHHHHHhCCChhHh
Confidence            2211 11122568899999998765 4588999999999999999999999965321     11111111100000    


Q ss_pred             -------cccccccccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 -------SFKEIVDPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 -------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                             ......+ .........+. .....+..+.+++.+||+.+|++|||+.+++.
T Consensus       236 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         236 LNRIGSDRVRKYIQ-NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             hhhhchhhHHHHHh-hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                   0000000 00000000000 01123456889999999999999999999876

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.5e-32  Score=234.04  Aligned_cols=189  Identities=21%  Similarity=0.301  Sum_probs=153.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPF----------------------------------------   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~----------------------------------------   92 (284)
                      .-|+.++.||+|.|+.|-.+.+  +|..||||++.+.-..                                        
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            4577788999999999999988  9999999999876111                                        


Q ss_pred             -------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-cCCcceeeccccccccCCCCc
Q 039895           93 -------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        93 -------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                                         +....+++.||+.|+.|+|   ...+|||||||+|+.+. +-|.+||.|||++..+.++..
T Consensus        98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k  174 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK  174 (864)
T ss_pred             ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence                               0445679999999999999   89999999999998775 568999999999988876654


Q ss_pred             cccCCCCcccCccccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..    +.+|++.|-|||++.+..|+ +++||||+|||||-|++|+.||...+  +.+.               +..++|
T Consensus       175 L~----TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN--DSET---------------LTmImD  233 (864)
T KOG4717|consen  175 LT----TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN--DSET---------------LTMIMD  233 (864)
T ss_pred             hh----cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc--chhh---------------hhhhhc
Confidence            32    37899999999999999987 68999999999999999999997654  2211               122222


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      -.        +..+.....++.+||..||..||.+|.|.++|+.
T Consensus       234 CK--------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  234 CK--------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             cc--------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            21        1235566777999999999999999999999874

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-32  Score=240.05  Aligned_cols=187  Identities=21%  Similarity=0.291  Sum_probs=140.6

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CCCc----
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FPFS----   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~~~----   93 (284)
                      .-||.|+||.||++..  .+-..|.|++...                                         ||..    
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD  117 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD  117 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence            4689999999999998  4555666776543                                         4433    


Q ss_pred             ------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcc
Q 039895           94 ------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        94 ------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                  .++.-++.|++.||.|||   +++|||||||..|||+.-+|.++|+|||.+........   ...++.
T Consensus       118 aimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q---kRDsFI  191 (1187)
T KOG0579|consen  118 AIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ---KRDSFI  191 (1187)
T ss_pred             HHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHHh---hhcccc
Confidence                        556678999999999999   99999999999999999999999999999866544332   223489


Q ss_pred             cCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          162 GTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       162 gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      |||.|||||+..     ..+|++++||||||++|.||..+.+|-....     .+..   +... .....+-++.     
T Consensus       192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-----pMRV---llKi-aKSePPTLlq-----  257 (1187)
T KOG0579|consen  192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRV---LLKI-AKSEPPTLLQ-----  257 (1187)
T ss_pred             CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-----hHHH---HHHH-hhcCCCcccC-----
Confidence            999999999854     4589999999999999999999998864322     1111   1111 1111111111     


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              +......+.+++.+||..||..||++.++++
T Consensus       258 --------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  258 --------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             --------cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence                    2233344889999999999999999999975

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.97  E-value=2.3e-31  Score=228.73  Aligned_cols=188  Identities=25%  Similarity=0.331  Sum_probs=142.6

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------C
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------F   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~   90 (284)
                      |+..+.||+|+||.||++..  ++..||+|++...                                            +
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            66678999999999999998  7889999988532                                            1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |.               ...+..++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.......    
T Consensus       107 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~----  179 (317)
T cd06635         107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN----  179 (317)
T ss_pred             CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCcc----
Confidence            11               1455678999999999999   9999999999999999999999999999886543321    


Q ss_pred             CCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                         ...|++.|+|||++.   ...++.++|||||||++|+|++|..||....        ............. ..    
T Consensus       180 ---~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~~-~~----  243 (317)
T cd06635         180 ---SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNES-PT----  243 (317)
T ss_pred             ---cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHhccC-CC----
Confidence               146888999999873   4568899999999999999999999986421        1111111111110 00    


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                                .........+.+++.+||+.+|.+||++.++++.+
T Consensus       244 ----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         244 ----------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             ----------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence                      00112233478999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=1.5e-31  Score=227.77  Aligned_cols=208  Identities=18%  Similarity=0.192  Sum_probs=144.2

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCC-------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFP-------------------------------------------   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------------------------------------------   91 (284)
                      |+..+.||+|++|.||+|..  +|+.||+|.+.....                                           
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            66778999999999999998  688999999864311                                           


Q ss_pred             ------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           92 ------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                        .......++.||+.||.|||   +.+|+|+||+|+||+++.++.++|+|||++.........
T Consensus        82 e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  158 (298)
T cd07841          82 EFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK  158 (298)
T ss_pred             cccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence                              11446789999999999999   999999999999999999999999999999876543221


Q ss_pred             ccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccc--
Q 039895          154 INDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFK--  227 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--  227 (284)
                      .   ....+++.|+|||.+.+ ..++.++|||||||+++|+++|.++|....     ...............   .+.  
T Consensus       159 ~---~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  230 (298)
T cd07841         159 M---THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-----DIDQLGKIFEALGTPTEENWPGV  230 (298)
T ss_pred             c---cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-----cHHHHHHHHHHcCCCchhhhhhc
Confidence            1   11356788999998754 457899999999999999999976665322     111111111110000   000  


Q ss_pred             -ccccccccCCCCCCCh---hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          228 -EIVDPAIVGEEGLMWP---EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       228 -~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                       ...+.. ........+   ........+.+++.+||+.+|++|||+.|++..
T Consensus       231 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         231 TSLPDYV-EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccccc-cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence             000000 000000000   011234558899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=1.8e-31  Score=222.46  Aligned_cols=149  Identities=21%  Similarity=0.351  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-------cceeeccccccccCCCCccccCCCCcccCccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-------VAQLFDFTLSLSIPEGETHINDSNRVIGTFGF  166 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  166 (284)
                      ..++.++.||+.||+|||   +.+|+||||||+|||++.++       .++|+|||++.......       ...++..|
T Consensus       101 ~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~y  170 (259)
T cd05037         101 HWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE-------ERVERIPW  170 (259)
T ss_pred             HHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCccccccccc-------ccccCCCc
Confidence            456778999999999999   99999999999999999888       79999999987754311       14567789


Q ss_pred             cccccccCC--CCCcchhHHHHHHHHHHHHhC-CCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCCh
Q 039895          167 MAPEYRTTG--DFSEKSDVYSFGALLLELLTG-KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWP  243 (284)
Q Consensus       167 ~aPE~~~~~--~~~~~~DvwS~G~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
                      +|||++...  .++.++||||||+++|++++| ..|+....     ......   .........         .     +
T Consensus       171 ~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-----~~~~~~---~~~~~~~~~---------~-----~  228 (259)
T cd05037         171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-----SSEKER---FYQDQHRLP---------M-----P  228 (259)
T ss_pred             cChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-----chhHHH---HHhcCCCCC---------C-----C
Confidence            999998876  789999999999999999995 55554321     011111   110000000         0     0


Q ss_pred             hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          244 EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       244 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      .    ...+.+++.+||..+|++|||+.+|++.|.
T Consensus       229 ~----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         229 D----CAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             C----chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0    144789999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.97  E-value=1.4e-31  Score=227.50  Aligned_cols=194  Identities=19%  Similarity=0.282  Sum_probs=146.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      +.|...+.||+|+||.||++..  ++..||+|.+...                                         ++
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            6788889999999999999987  7788999987533                                         11


Q ss_pred             C--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 F--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 ~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                      .              ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........   .
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~---~  172 (293)
T cd06647          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---R  172 (293)
T ss_pred             CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc---c
Confidence            0              1345778999999999999   999999999999999999999999999988765433221   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....|++.|+|||.+....++.++||||||+++|++++|..||......  .      .+......+.            
T Consensus       173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~--~------~~~~~~~~~~------------  232 (293)
T cd06647         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--R------ALYLIATNGT------------  232 (293)
T ss_pred             ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh--h------heeehhcCCC------------
Confidence            2246888999999998888999999999999999999999998653210  0      0000000000            


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                        ..++........+.+++.+||+.+|++||++.+++.+
T Consensus       233 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         233 --PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             --CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              0011112233457899999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.7e-31  Score=229.33  Aligned_cols=195  Identities=22%  Similarity=0.282  Sum_probs=145.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|++|+||+|..  ++..||+|.+...                                           
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            3677888999999999999999  6899999988643                                           


Q ss_pred             -CCC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 -FPF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 -~~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                       +|.                 +.....++.|++.||.|||   +.+++|+||||+||+++.++.++|+|||++.......
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence             111                 0345568899999999999   9999999999999999999999999999987653221


Q ss_pred             ccc--------------------------cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 039895          152 THI--------------------------NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF  205 (284)
Q Consensus       152 ~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~  205 (284)
                      ...                          .......||..|+|||++.+..++.++||||||+++|++++|..||.... 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~-  236 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN-  236 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc-
Confidence            100                          01112468899999999988889999999999999999999999986432 


Q ss_pred             CCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC----HHHHHH
Q 039895          206 DDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT----IVQVAK  275 (284)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps----~~ev~~  275 (284)
                         .    ......... ...              .++........+.+++.+||+.+|++|||    +.++++
T Consensus       237 ---~----~~~~~~~~~-~~~--------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         237 ---R----DETFSNILK-KEV--------------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             ---h----HHHHHHHhc-CCc--------------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence               0    111111110 000              00111113445889999999999999999    777765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.5e-32  Score=240.05  Aligned_cols=191  Identities=22%  Similarity=0.316  Sum_probs=147.8

Q ss_pred             CCeeeecCCceEEEEEe---CCc--ceEEEeecCCCCCc-----------------------------------------
Q 039895           60 GKVIMKCLFYKLYKGFL---QDR--PISVMKFEDTFPFS-----------------------------------------   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~---~~~--~vavK~~~~~~~~~-----------------------------------------   93 (284)
                      .++||+|.||.|++|.|   .|+  .||||.+...-...                                         
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl  194 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL  194 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence            35899999999999999   343  58999998761110                                         


Q ss_pred             -----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           94 -----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        94 -----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                       ...-.++.|||.|+.||-   ++++|||||-.+|+|+.....+||+|||+.+.+.........
T Consensus       195 GSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm  271 (1039)
T KOG0199|consen  195 GSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM  271 (1039)
T ss_pred             chHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence                             233468999999999999   999999999999999999999999999999998765544332


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                      .....-...|.|||.+....++.++|||+|||++|||+| |..||-+..        -.+ +         .+.+|.   
T Consensus       272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--------g~q-I---------L~~iD~---  330 (1039)
T KOG0199|consen  272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--------GIQ-I---------LKNIDA---  330 (1039)
T ss_pred             cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC--------HHH-H---------HHhccc---
Confidence            222234678999999999999999999999999999999 566775432        111 1         111221   


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                         +.+.+.+..|+..+.++|..||..+|++|||+..|.+.+
T Consensus       331 ---~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  331 ---GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             ---cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence               112233567788899999999999999999999997443

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=2.3e-31  Score=223.93  Aligned_cols=196  Identities=19%  Similarity=0.292  Sum_probs=145.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      .+|+....||+|+||.||+|..       ....|++|.+...                                      
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            4677888999999999999996       2467999987543                                      


Q ss_pred             ----CC------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           90 ----FP------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        90 ----~~------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                          +|                        ....+..++.|++.||+|||   +.+|+|+||||+||+++.++.++++||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence                11                        01335678999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHH
Q 039895          142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      |++..........  .....++..|+|||.+.+..++.++||||||+++|++++ |..||....        ....+.. 
T Consensus       162 ~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~--------~~~~~~~-  230 (275)
T cd05046         162 SLSKDVYNSEYYK--LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS--------DEEVLNR-  230 (275)
T ss_pred             ccccccCcccccc--cCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc--------hHHHHHH-
Confidence            9987553322211  112456788999999888888999999999999999999 667764321        1111111 


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      ...+.....              .....+..+.+++.+||+.+|++|||+.|++..|.
T Consensus       231 ~~~~~~~~~--------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         231 LQAGKLELP--------------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHcCCcCCC--------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            111111110              01122335889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=6.5e-32  Score=229.47  Aligned_cols=205  Identities=17%  Similarity=0.234  Sum_probs=145.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||.|+||.||+|..  +++.+|+|.++..                                           
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            5678888999999999999999  6889999988532                                           


Q ss_pred             --CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        ++               .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++........
T Consensus        85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  161 (293)
T cd07843          85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK  161 (293)
T ss_pred             ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence              01               11456789999999999999   99999999999999999999999999999887654321


Q ss_pred             cccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-------
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-------  224 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------  224 (284)
                      ..   ....+++.|+|||.+.+. .++.++||||||+++|+|++|..||.....     ......+.......       
T Consensus       162 ~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-----~~~~~~~~~~~~~~~~~~~~~  233 (293)
T cd07843         162 PY---TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-----IDQLNKIFKLLGTPTEKIWPG  233 (293)
T ss_pred             cc---ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCchHHHHH
Confidence            11   124578899999988654 468999999999999999999999864321     11111110000000       


Q ss_pred             --ccc--------ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 --SFK--------EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 --~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        .+.        ......+...    ++.. .....+.+++.+||+.+|++|||+.|++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         234 FSELPGAKKKTFTKYPYNQLRKK----FPAL-SLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hhccchhcccccccccchhhhcc----cccc-CCChHHHHHHHHHhccCccccCCHHHHhc
Confidence              000        0000000000    0000 02444789999999999999999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-32  Score=235.64  Aligned_cols=202  Identities=19%  Similarity=0.230  Sum_probs=156.7

Q ss_pred             CCCeeeecCCceEEEEEeCC-cceEEEeecCCCCCc--------------------------------------------
Q 039895           59 GGKVIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFS--------------------------------------------   93 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~~~-~~vavK~~~~~~~~~--------------------------------------------   93 (284)
                      ..++||+|.||.|..+..+| ..||||.++...|..                                            
T Consensus       542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGD  621 (807)
T KOG1094|consen  542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGD  621 (807)
T ss_pred             hhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence            45689999999999999965 999999998772211                                            


Q ss_pred             ---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           94 ---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 ---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                     ..-++|+.||+.|++||.   +.++|||||.++|+|++.++++||+|||+++.+.++.++.....
T Consensus       622 LnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr  698 (807)
T KOG1094|consen  622 LNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR  698 (807)
T ss_pred             HHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence                           345689999999999999   99999999999999999999999999999998888776654332


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT--GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                       .+-+..|||||.+..+++++++|||+||+++||+++  ...|+....     .....+........+...-.       
T Consensus       699 -~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt-----~e~vven~~~~~~~~~~~~~-------  765 (807)
T KOG1094|consen  699 -AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT-----DEQVVENAGEFFRDQGRQVV-------  765 (807)
T ss_pred             -eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh-----HHHHHHhhhhhcCCCCccee-------
Confidence             456889999999999999999999999999999876  556664322     11122222222211111111       


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                           .+.+.-|+..+.++|.+||..+-.+|||++++...|++..
T Consensus       766 -----l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  766 -----LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             -----ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence                 1224456667889999999999999999999999998753

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.97  E-value=1e-31  Score=227.36  Aligned_cols=209  Identities=21%  Similarity=0.328  Sum_probs=144.3

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..+.||+|+||.||+|.+  +++.||+|++...                                           +
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            577788999999999999999  6889999987532                                           1


Q ss_pred             C---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 P---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      +               .....+.++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++.........  
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~--  156 (286)
T cd07846          82 VDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV--  156 (286)
T ss_pred             CCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccc--
Confidence            1               11456778999999999999   899999999999999999999999999998776443221  


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc--Cccccccc-
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN--ESFKEIVD-  231 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-  231 (284)
                       .....++..|+|||++.+. .++.++||||||+++|||++|..||....    ......... .....  .......+ 
T Consensus       157 -~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~  230 (286)
T cd07846         157 -YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS----DIDQLYHII-KCLGNLIPRHQEIFQK  230 (286)
T ss_pred             -cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc----hHHHHHHHH-HHhCCCchhhHHHhcc
Confidence             1124678999999988653 47889999999999999999998875432    000000000 00000  00000000 


Q ss_pred             -----ccccCCCCCCCh---hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 -----PAIVGEEGLMWP---EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 -----~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           ...........+   .....+..+.+++.+||+.+|++||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                 000000000000   01123455889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=2.3e-31  Score=223.61  Aligned_cols=197  Identities=18%  Similarity=0.330  Sum_probs=142.7

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||.||+|..  +|+.||+|.+...                                             
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            55678999999999999987  7889999987421                                             


Q ss_pred             ------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 ------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 ------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                            ++.               ...+..++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++....
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSD  159 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence                  110               0345678999999999999   8999999999999999999999999999987654


Q ss_pred             CCCccccCCCCcccCccccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ...... ......|+..|+|||++....  ++.++|+||||+++|++++|..|+....       ...... .... ...
T Consensus       160 ~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-------~~~~~~-~~~~-~~~  229 (272)
T cd06629         160 DIYDND-QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE-------AIAAMF-KLGN-KRS  229 (272)
T ss_pred             cccccc-ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc-------hHHHHH-Hhhc-ccc
Confidence            321111 112246889999999987654  7899999999999999999999985322       011111 1100 000


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ...+....          ....+..+.+++.+||+.+|++|||+.+|++.
T Consensus       230 ~~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         230 APPIPPDV----------SMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             CCcCCccc----------cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            00111100          11233458899999999999999999999763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=1.4e-31  Score=229.14  Aligned_cols=214  Identities=16%  Similarity=0.176  Sum_probs=146.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------CC----------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------FP----------   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------~~----------   91 (284)
                      .++|...+.||+|+||.||+|..  ++..+|+|++...                              .+          
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            47888899999999999999998  7889999987422                              00          


Q ss_pred             --------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           92 --------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        92 --------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                                                .......++.|+++||.|||   +.+|+|+||||+||++++++.++|+|||++.
T Consensus        87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866          87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence                                      00445678999999999999   9999999999999999999999999999997


Q ss_pred             ccCCCCccc--------cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHH
Q 039895          146 SIPEGETHI--------NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL  216 (284)
Q Consensus       146 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~  216 (284)
                      .........        .......+++.|+|||.+.+. .++.++|||||||++|||++|.+||....     .......
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~-----~~~~~~~  238 (311)
T cd07866         164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS-----DIDQLHL  238 (311)
T ss_pred             hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHH
Confidence            654322111        111224678889999987654 57899999999999999999999886432     1111111


Q ss_pred             HHHHhhcC---cc------cccccccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          217 VKKYIENE---SF------KEIVDPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       217 ~~~~~~~~---~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +.......   .+      ....+........... .........+.+++.+||+.+|.+|||+.|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            11111000   00      0000000000000000 000112245789999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=9.6e-32  Score=227.40  Aligned_cols=211  Identities=16%  Similarity=0.202  Sum_probs=145.3

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|...+.||+|++|.||+|..  +|..||+|++...                                           +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            366778999999999999998  7899999998643                                           1


Q ss_pred             C---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 P---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      +               ....+..++.||+.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........  
T Consensus        81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~--  155 (286)
T cd07832          81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR--  155 (286)
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC--
Confidence            1               11446678999999999999   999999999999999999999999999998876543321  


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---cccccc-
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEIV-  230 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-  230 (284)
                      ......|+..|+|||++.+. .++.++||||+||+++++++|.++|....     .......+.......   .+++.. 
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07832         156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-----DIEQLAIVFRTLGTPNEETWPGLTS  230 (286)
T ss_pred             ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-----HHHHHHHHHHHcCCCChHHHhhccC
Confidence            11124688999999988654 46899999999999999999976664322     111111111111000   000000 


Q ss_pred             --cc---cccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 --DP---AIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 --~~---~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                        +.   .........+ .........+.+++.+||+.+|++|||+.+++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence              00   0000000000 0011223568899999999999999999999763

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.97  E-value=2.7e-31  Score=221.20  Aligned_cols=189  Identities=23%  Similarity=0.299  Sum_probs=143.0

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|++|.||+|..  ++..|++|.+...                                             
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            56678999999999999998  6899999987532                                             


Q ss_pred             -C---------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -F---------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~---------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +               ........++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++........ 
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~-  157 (258)
T cd06632          82 ELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF-  157 (258)
T ss_pred             EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecccccc-
Confidence             0               011445578999999999999   99999999999999999999999999999876644321 


Q ss_pred             ccCCCCcccCccccccccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                         .....|+..|+|||.+.... ++.++|+||||+++|++++|..||....        .................   
T Consensus       158 ---~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~---  223 (258)
T cd06632         158 ---AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE--------GVAAVFKIGRSKELPPI---  223 (258)
T ss_pred             ---ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc--------HHHHHHHHHhcccCCCc---
Confidence               12256889999999987766 8999999999999999999999985422        11111111110111110   


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  +......+.+++.+||+.+|++|||+.+++.
T Consensus       224 ------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         224 ------------PDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             ------------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence                        1112234778999999999999999999975

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.6e-31  Score=223.90  Aligned_cols=191  Identities=21%  Similarity=0.324  Sum_probs=143.6

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .|+..+.||+|+||.||+|.+  ++..||+|.+...                                            
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            466778999999999999998  7899999987532                                            


Q ss_pred             -CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 -FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 -~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                       ++              .....+.++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++......... 
T Consensus        82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-  157 (277)
T cd06917          82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK-  157 (277)
T ss_pred             ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc-
Confidence             00              00456778999999999999   999999999999999999999999999998776543321 


Q ss_pred             cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                        .....|+..|+|||.+.++ .++.++||||||+++|+|++|..||....        ....... ....     ..+.
T Consensus       158 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~--------~~~~~~~-~~~~-----~~~~  221 (277)
T cd06917         158 --RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD--------AFRAMML-IPKS-----KPPR  221 (277)
T ss_pred             --cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC--------hhhhhhc-cccC-----CCCC
Confidence              1225688999999987654 57899999999999999999999986432        0111100 0000     0011


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +...         .....+.+++.+||+.+|++||++.+++.
T Consensus       222 ~~~~---------~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         222 LEDN---------GYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             CCcc---------cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            1000         12334789999999999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=5.4e-33  Score=259.02  Aligned_cols=198  Identities=22%  Similarity=0.268  Sum_probs=150.5

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      .+-.+..+++||.|.||.||-|..  +|...|+|.+.-.                                         
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            445677889999999999999998  8899999987644                                         


Q ss_pred             --CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        ||.+               .-...+..|++.|++|||   ..|||||||||.||+++.+|.+|++|||.|..+.....
T Consensus      1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence              5544               122357889999999999   99999999999999999999999999999998865531


Q ss_pred             c-ccCCCCcccCccccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          153 H-INDSNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       153 ~-~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      . ...-....||+.|||||++.+..   ...+.||||+||++.||+||+.||....      ..++.+..-.  -+..+ 
T Consensus      1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d------ne~aIMy~V~--~gh~P- 1460 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD------NEWAIMYHVA--AGHKP- 1460 (1509)
T ss_pred             cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc------chhHHHhHHh--ccCCC-
Confidence            1 12223468999999999997653   5578999999999999999999996432      1111111111  11111 


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                    +.+.....+-.+++.+||..||..|-++.|+++.
T Consensus      1461 --------------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1461 --------------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             --------------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence                          1233345556799999999999999999888753

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=5.1e-31  Score=221.28  Aligned_cols=159  Identities=18%  Similarity=0.225  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC-
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-  174 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  174 (284)
                      ...++.||+.||.|||   +.+++||||||+|||++.++.++|+|||++......... .......++..|+|||++.. 
T Consensus       101 ~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  176 (268)
T cd05086         101 LQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI-ETEDDKCVPLRWLAPELVGEF  176 (268)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhh-hcccCCcCcccccCchhcccc
Confidence            3568899999999999   999999999999999999999999999987643222111 11122567889999998743 


Q ss_pred             ------CCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHH
Q 039895          175 ------GDFSEKSDVYSFGALLLELLTG-KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQ  247 (284)
Q Consensus       175 ------~~~~~~~DvwS~G~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
                            ..++.++|||||||++|||+++ ..||....        ........... ......++.+...          
T Consensus       177 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~----------  237 (268)
T cd05086         177 HGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS--------DREVLNHVIKD-QQVKLFKPQLELP----------  237 (268)
T ss_pred             cCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHhh-cccccCCCccCCC----------
Confidence                  2457899999999999999975 44553221        11112111111 1112222222111          


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          248 QLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       248 ~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                      ....+.+++..|| .+|++|||+.+|++.|.
T Consensus       238 ~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         238 YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            1233678999999 67999999999988873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=2.9e-31  Score=223.95  Aligned_cols=184  Identities=21%  Similarity=0.295  Sum_probs=138.5

Q ss_pred             eeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------------CCC
Q 039895           62 VIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------------FPF   92 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------------~~~   92 (284)
                      +||+|+||.||++..  +++.||+|.+...                                               +|.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999988  6889999987532                                               110


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     ...+..++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++........     
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~-----  152 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-----  152 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-----
Confidence                           0456779999999999999   89999999999999999999999999999876543221     


Q ss_pred             CCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....|+..|+|||++.++ .++.++||||+||++|+|++|..||.......     ... ........      ...+  
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~-----~~~-~~~~~~~~------~~~~--  218 (278)
T cd05606         153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHE-IDRMTLTM------AVEL--  218 (278)
T ss_pred             cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc-----hHH-HHHHhhcc------CCCC--
Confidence            124689999999998754 68999999999999999999999986542110     011 00000000      0000  


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                              +...+..+.+++.+||..+|++||     ++.++++
T Consensus       219 --------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         219 --------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             --------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence                    111234478999999999999999     9999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=1.3e-31  Score=228.51  Aligned_cols=214  Identities=18%  Similarity=0.196  Sum_probs=148.5

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------CC--------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------FP--------   91 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------~~--------   91 (284)
                      .+.++|+..+.||+|+||.||+|..  +|..||+|++...                              .+        
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            4567899999999999999999999  6889999998532                              00        


Q ss_pred             ------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           92 ------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        92 ------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                                                    .......++.|++.||+|||   +.+|+|+||+|+||+++.++.+||+||
T Consensus        84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~df  160 (302)
T cd07864          84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADF  160 (302)
T ss_pred             ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcc
Confidence                                          00456788999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      |++..........  .....++..|+|||.+.+. .++.++|||||||++|+|++|+.||....     .......+...
T Consensus       161 g~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-----~~~~~~~~~~~  233 (302)
T cd07864         161 GLARLYNSEESRP--YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-----ELAQLELISRL  233 (302)
T ss_pred             cccccccCCcccc--cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHH
Confidence            9987765433211  1113467889999987653 57889999999999999999998886422     11111111111


Q ss_pred             hhcC---ccccccccccc----CCCCCCC---hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          221 IENE---SFKEIVDPAIV----GEEGLMW---PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       221 ~~~~---~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....   .++.+......    .......   ......+..+.+++..||+.+|++|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1110   11111000000    0000000   001112445889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-32  Score=220.51  Aligned_cols=199  Identities=23%  Similarity=0.246  Sum_probs=153.5

Q ss_pred             HhcCCCC-CCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           53 ATDDFDG-GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~-~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      +|++|+. .++||-|-.|.|..+..  ++..+|+|++...                                        
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm  138 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM  138 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence            4566654 35899999999999998  8999999998765                                        


Q ss_pred             C------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceeeccccccccC
Q 039895           90 F------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 ~------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~Dfg~a~~~~  148 (284)
                      -                  ..+...-.|+.||+.|+.|||   +.+|.||||||+|+|...   |..+||+|||+|+.-.
T Consensus       139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~  215 (400)
T KOG0604|consen  139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ  215 (400)
T ss_pred             ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence            1                  111556689999999999999   999999999999999974   4578999999998765


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ....    ..+.+.||.|.|||++....|+..+|+||+||++|-|++|.+||++..-     ..+..-.+..+.      
T Consensus       216 ~~~~----L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg-----~aispgMk~rI~------  280 (400)
T KOG0604|consen  216 EPGD----LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-----LAISPGMKRRIR------  280 (400)
T ss_pred             CCcc----ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC-----ccCChhHHhHhh------
Confidence            3221    2236779999999999999999999999999999999999999987541     111111111111      


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            .+.+...-++..+.+....++++.+|..+|.+|.|+.++++
T Consensus       281 ------~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  281 ------TGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             ------ccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence                  12222223445566777889999999999999999999875

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9e-32  Score=226.03  Aligned_cols=196  Identities=24%  Similarity=0.293  Sum_probs=145.8

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      .++++|...+.||+|++|.||+|..  +++.+++|++...                                        
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            4568899999999999999999999  6788999997643                                        


Q ss_pred             -------CCCc-------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccc
Q 039895           90 -------FPFS-------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL  143 (284)
Q Consensus        90 -------~~~~-------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~  143 (284)
                             +|..                   .....++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence                   0000                   223458999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      +.........   .....|+..|+|||++..     ..++.++|||||||+++++++|..||....    .    .....
T Consensus       160 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~----~~~~~  228 (275)
T cd06608         160 SAQLDSTLGR---RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH----P----MRALF  228 (275)
T ss_pred             ceecccchhh---hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc----h----HHHHH
Confidence            8765432221   112568899999998753     246789999999999999999999986422    0    01111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ... ......+             .........+.+++.+||..||++|||+.++++
T Consensus       229 ~~~-~~~~~~~-------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         229 KIP-RNPPPTL-------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             Hhh-ccCCCCC-------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            111 1100010             111223445889999999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7e-32  Score=225.29  Aligned_cols=186  Identities=20%  Similarity=0.223  Sum_probs=139.1

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------CC--
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------FP--   91 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------~~--   91 (284)
                      +.||+|+||.||+|..  +|+.||+|.+...                                             +|  
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999998  7889999988542                                             11  


Q ss_pred             -------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           92 -------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        92 -------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                   .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++......       .
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-------~  151 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN-------K  151 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceecccc-------c
Confidence                         11456789999999999999   999999999999999999999999999988764331       1


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...|++.|+|||.+.+..++.++||||||+++|++++|..||....        ......... ..... . ..      
T Consensus       152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~-~-~~------  214 (260)
T cd05611         152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET--------PDAVFDNIL-SRRIN-W-PE------  214 (260)
T ss_pred             cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-hcccC-C-CC------
Confidence            2467889999999988888999999999999999999999986432        111111111 11000 0 00      


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                          ......+..+.+++.+||+.+|++||++.++.+.|
T Consensus       215 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         215 ----EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             ----cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence                00112334478999999999999999775544433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.97  E-value=8.2e-32  Score=224.30  Aligned_cols=191  Identities=21%  Similarity=0.280  Sum_probs=146.3

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      .|+..+.||+|+||.||.+..  +|+.||+|.+...                                           +
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            366778999999999999998  7889999987532                                           1


Q ss_pred             CC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 PF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +.                 ....+.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  157 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL  157 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence            11                 1345788999999999999   899999999999999999999999999998766443221


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .   ....|++.|+|||++.+..++.++|||||||+++++++|..|+....        ....+..... +....     
T Consensus       158 ~---~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~~-~~~~~-----  220 (256)
T cd08218         158 A---RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN--------MKNLVLKIIR-GSYPP-----  220 (256)
T ss_pred             h---hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC--------HHHHHHHHhc-CCCCC-----
Confidence            1   12457889999999988889999999999999999999999986422        1122222111 11110     


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                .+......+.+++.+||+.+|++||++.+|++.
T Consensus       221 ----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         221 ----------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             ----------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence                      111223347899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.97  E-value=4.4e-31  Score=219.71  Aligned_cols=189  Identities=21%  Similarity=0.324  Sum_probs=142.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|...+.||+|+||.||++..  ++..+|+|.+...                                           +
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            366778999999999999988  7889999987543                                           0


Q ss_pred             C-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-CcceeeccccccccCCCCc
Q 039895           91 P-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~~~~~~~~  152 (284)
                      +                 .+.....++.+++.||.|||   +.+++|+||+|+||+++.+ +.++|+|||.+........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK  157 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence            0                 01345678999999999999   9999999999999999855 4689999999987654322


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .    ....|+..|+|||.+....++.++||||||+++|++++|..||....        .......... ......   
T Consensus       158 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~---  221 (256)
T cd08220         158 A----YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN--------LPALVLKIMS-GTFAPI---  221 (256)
T ss_pred             c----cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc--------hHHHHHHHHh-cCCCCC---
Confidence            1    12467889999999988888999999999999999999999985432        1111111111 111111   


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  .......+.+++.+||+.+|++|||+.|++.
T Consensus       222 ------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         222 ------------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             ------------CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                        0112334789999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=2.3e-31  Score=224.92  Aligned_cols=208  Identities=16%  Similarity=0.167  Sum_probs=142.3

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------CC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FP   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~   91 (284)
                      |+..+.||.|++|.||+|..  +|..||+|++...                                           ++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            45678999999999999998  7899999987532                                           00


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      ....++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........  
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--  155 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT--  155 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc--
Confidence                            11455789999999999999   899999999999999999999999999998765332111  


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--------c
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--------F  226 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  226 (284)
                       .....+++.|+|||++.+. .++.++||||||+++|+|++|..||....    .................        .
T Consensus       156 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd07835         156 -YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS----EIDQLFRIFRTLGTPDEDVWPGVTSL  230 (283)
T ss_pred             -cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCChHHhhhhhhc
Confidence             1113568899999987654 57899999999999999999999986432    11111111111000000        0


Q ss_pred             cccccccccCCC-CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIVDPAIVGEE-GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ++... ...... .............+.+++.+||+.+|++|||+.|+++
T Consensus       231 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         231 PDYKP-TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhhhh-hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00000 000000 0000001112245789999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-31  Score=239.65  Aligned_cols=196  Identities=21%  Similarity=0.319  Sum_probs=153.1

Q ss_pred             CCCeeeecCCceEEEEEe--CC----cceEEEeecCC-----------------------------CCCc----------
Q 039895           59 GGKVIMKCLFYKLYKGFL--QD----RPISVMKFEDT-----------------------------FPFS----------   93 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~--~~----~~vavK~~~~~-----------------------------~~~~----------   93 (284)
                      ...+||+|+||+||+|.|  .|    -+||+|++...                             .|..          
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~m  779 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLM  779 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhc
Confidence            356899999999999999  44    47999998765                             1111          


Q ss_pred             ------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           94 ------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        94 ------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                        ...+.+..|||+||.|||   .+.++||||-.+|||+.+-..+||.|||+++.+........
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~  856 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS  856 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence                              567789999999999999   99999999999999999999999999999998876544332


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      ... ..-.+.|||-|.+....|+.++|||||||++||++| |..|++...         ..-+...++.+          
T Consensus       857 ~~~-gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~---------~~eI~dlle~g----------  916 (1177)
T KOG1025|consen  857 APG-GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP---------AEEIPDLLEKG----------  916 (1177)
T ss_pred             ccc-cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC---------HHHhhHHHhcc----------
Confidence            221 223578999999999999999999999999999998 777876433         11111111111          


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                           .+.+.++.+...+..+|.+||..|+..||+++++...+.++..
T Consensus       917 -----eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  917 -----ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             -----ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence                 1123345566678999999999999999999999998877653

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.97  E-value=4.9e-31  Score=219.65  Aligned_cols=192  Identities=25%  Similarity=0.285  Sum_probs=146.6

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..+.||.|+||.||.+..  ++..+++|.+...                                           +
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            367778999999999888887  7889999986543                                           1


Q ss_pred             CCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 PFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      |..                 .....++.|++.||.|||   +.+++|+||+|+||+++.++.+||+|||++.........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~  157 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM  157 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence            110                 345678999999999999   899999999999999999999999999998776443321


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .....|++.|+|||++.+..++.++||||||+++|+|++|..||....        ......... .+.....    
T Consensus       158 ---~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~-~~~~~~~----  221 (256)
T cd08221         158 ---AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN--------PLNLVVKIV-QGNYTPV----  221 (256)
T ss_pred             ---ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-cCCCCCC----
Confidence               122568999999999988888999999999999999999999885422        112222211 1111110    


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                                 .......+.+++.+||+.+|++|||+.++++.+
T Consensus       222 -----------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         222 -----------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             -----------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence                       112233478999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=5.7e-31  Score=221.99  Aligned_cols=190  Identities=24%  Similarity=0.340  Sum_probs=144.5

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CCC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FPF   92 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~~   92 (284)
                      |+..+.||+|+||.||+|..  ++..||+|++...                                          +|.
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            55677899999999999987  7789999987533                                          111


Q ss_pred             --------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCC
Q 039895           93 --------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 --------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                    ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+......   ..
T Consensus        86 ~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~---~~  159 (277)
T cd06641          86 GGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RN  159 (277)
T ss_pred             CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhh---hc
Confidence                          1456789999999999999   999999999999999999999999999998766432211   12


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...++..|+|||.+.+..++.++|+|||||++|++++|..|+....     .   ...... ........     +    
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-----~---~~~~~~-~~~~~~~~-----~----  221 (277)
T cd06641         160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH-----P---MKVLFL-IPKNNPPT-----L----  221 (277)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc-----h---HHHHHH-HhcCCCCC-----C----
Confidence            2467889999999988888999999999999999999999885322     1   111111 11111100     0    


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                            ....+..+.+++.+||+.+|++||++.++++.
T Consensus       222 ------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         222 ------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             ------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                  11223347899999999999999999999884

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=1.6e-31  Score=231.67  Aligned_cols=216  Identities=20%  Similarity=0.202  Sum_probs=147.7

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------CC--------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------FP--------   91 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------~~--------   91 (284)
                      ..++|...+.||+|+||.||+|.+  +|..+|+|++...                               +|        
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            456788889999999999999998  6889999977431                               00        


Q ss_pred             --------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           92 --------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        92 --------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                          ....+..++.||+.||.|||   +.+|+|+||+|+||+++.++.+||+|||++.......
T Consensus        85 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~  161 (337)
T cd07852          85 YLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE  161 (337)
T ss_pred             EEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence                                00344568999999999999   9999999999999999999999999999998765433


Q ss_pred             cc--ccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-----
Q 039895          152 TH--INDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-----  223 (284)
Q Consensus       152 ~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----  223 (284)
                      ..  ........|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.....     .............     
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~-----~~~~~~~~~~~~~~~~~~  236 (337)
T cd07852         162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST-----LNQLEKIIEVIGPPSAED  236 (337)
T ss_pred             ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCCHHH
Confidence            21  111122568999999998754 4578899999999999999999999854321     0000000000000     


Q ss_pred             ------CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 ------ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                            ......++....................+.+++.+||+.+|++|||+.++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence                  00000000000000000000011134558899999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=2.4e-31  Score=224.84  Aligned_cols=209  Identities=17%  Similarity=0.186  Sum_probs=144.5

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC--------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF--------------------------------------------   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--------------------------------------------   90 (284)
                      |+..+.||+|++|.||+|..  ++..+|+|++....                                            
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            45567899999999999998  57899999986430                                            


Q ss_pred             ----------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 ----------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ----------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                      ......+.++.|++.||+|||   ..+++|+||+|+||++++++.++|+|||++..........
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~  157 (287)
T cd07840          81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD  157 (287)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence                            000355789999999999999   8999999999999999999999999999998765443211


Q ss_pred             cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---cccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEIV  230 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  230 (284)
                        .....++..|+|||.+.+ ..++.++||||||+++||+++|..||....     .......+.......   .+....
T Consensus       158 --~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07840         158 --YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST-----ELEQLEKIFELCGSPTDENWPGVS  230 (287)
T ss_pred             --ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCchhhccccc
Confidence              112456888999997664 457899999999999999999999986432     111111111111110   011100


Q ss_pred             cc----cccCCCCCCC---hhhHH-HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DP----AIVGEEGLMW---PEKEQ-QLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~----~~~~~~~~~~---~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +.    ..........   ..... ++..+.+++.+||+.+|++||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            00    0000000000   00011 2556889999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=5.3e-32  Score=226.12  Aligned_cols=188  Identities=21%  Similarity=0.251  Sum_probs=151.4

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .|+..+.||+|.||.|-+++.  .|+.||||.+.+.                                            
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME  133 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME  133 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence            456667899999999999998  8999999998766                                            


Q ss_pred             ---------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 ---------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ---------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                     ...+.....++.||.+|+.|+|   .++++|||||.+|||+|.|+++||+|||++..+.......
T Consensus       134 YaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLq  210 (668)
T KOG0611|consen  134 YASGGELYDYISERGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQ  210 (668)
T ss_pred             ecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccccHHH
Confidence                           1111566789999999999999   9999999999999999999999999999998877655432


Q ss_pred             cCCCCcccCccccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          +++|++.|.+||++.+.+|. +.+|.||+||+||-|+.|..||++..        ...+++.. ..+...+.-.  
T Consensus       211 ----TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D--------hk~lvrQI-s~GaYrEP~~--  275 (668)
T KOG0611|consen  211 ----TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD--------HKRLVRQI-SRGAYREPET--  275 (668)
T ss_pred             ----HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch--------HHHHHHHh-hcccccCCCC--
Confidence                38899999999999999985 78999999999999999999997643        22233222 2222222111  


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                     +....-||.+||-.+|++|.|+.+|...
T Consensus       276 ---------------PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  276 ---------------PSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             ---------------CchHHHHHHHHHhcCcccchhHHHHhhh
Confidence                           1125579999999999999999998764

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-33  Score=231.09  Aligned_cols=208  Identities=17%  Similarity=0.237  Sum_probs=150.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------CCCc------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------FPFS------------   93 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------~~~~------------   93 (284)
                      ++.|....++|+|.||.|-++.+  .+..||||+++..                          .|..            
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            56788888999999999999999  6789999998754                          0100            


Q ss_pred             ------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-----------------
Q 039895           94 ------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-----------------  132 (284)
Q Consensus        94 ------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-----------------  132 (284)
                                              .....++.|++++++|||   +.+++|-||||+|||+.+                 
T Consensus       168 ivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r  244 (415)
T KOG0671|consen  168 IVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR  244 (415)
T ss_pred             EEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccceec
Confidence                                    567789999999999999   999999999999999942                 


Q ss_pred             ---CCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 039895          133 ---ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE  209 (284)
Q Consensus       133 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~  209 (284)
                         +..+++.|||.|.......+.      .+.|..|+|||++.+-.++.++||||+||||.|+.||...|+...  +.+
T Consensus       245 ~~ks~~I~vIDFGsAtf~~e~hs~------iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe--n~E  316 (415)
T KOG0671|consen  245 PLKSTAIKVIDFGSATFDHEHHST------IVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE--NLE  316 (415)
T ss_pred             cCCCcceEEEecCCcceeccCcce------eeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC--cHH
Confidence               235789999999776554432      678999999999999999999999999999999999999987644  112


Q ss_pred             cccHHHHHHHHhhc-----------------Cc--cccccccc-ccCCCCCCCh------hhHHHHHHHHHHHHHhhcCC
Q 039895          210 DYRLQDLVKKYIEN-----------------ES--FKEIVDPA-IVGEEGLMWP------EKEQQLLICTELAFKCLSES  263 (284)
Q Consensus       210 ~~~~~~~~~~~~~~-----------------~~--~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~l~~~cl~~~  263 (284)
                      ..   .+.+....+                 +.  +.+...+. .......+-|      ....+...+.+|+.+||..|
T Consensus       317 HL---aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD  393 (415)
T KOG0671|consen  317 HL---AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD  393 (415)
T ss_pred             HH---HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence            11   122221111                 10  00000000 0000000001      01233445899999999999


Q ss_pred             CCCCCCHHHHHH
Q 039895          264 EGDRPTIVQVAK  275 (284)
Q Consensus       264 p~~Rps~~ev~~  275 (284)
                      |.+|+|+.|++.
T Consensus       394 P~~RiTl~EAL~  405 (415)
T KOG0671|consen  394 PARRITLREALS  405 (415)
T ss_pred             ccccccHHHHhc
Confidence            999999999975

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.9e-31  Score=219.90  Aligned_cols=194  Identities=23%  Similarity=0.272  Sum_probs=144.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      .+|...+.||+|+||.||+|..  ++..||+|.+...                                           
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            3688899999999999999998  7899999986421                                           


Q ss_pred             -----CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           ++               .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  158 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT  158 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence                 00               00345678999999999999   99999999999999999999999999999976643


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ............|+..|+|||++.+..++.++|+|||||+++++++|..||....       .... +....... ....
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~-~~~~~~~~-~~~~  229 (264)
T cd06653         159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-------AMAA-IFKIATQP-TKPM  229 (264)
T ss_pred             ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-------HHHH-HHHHHcCC-CCCC
Confidence            2111111122568899999999988888999999999999999999999985321       1111 11111111 0011


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +              +......+.+++.+||. +|..|||+.+++.
T Consensus       230 ~--------------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         230 L--------------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             C--------------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            1              12233447899999999 5799999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.97  E-value=5.6e-31  Score=220.02  Aligned_cols=195  Identities=21%  Similarity=0.307  Sum_probs=150.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|+..+.||+|++|.||++..  ++..|++|++...                                          +
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            4688889999999999999999  5899999987654                                          1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +.               ...++.++.|++.||.|||   + .+++|+||+|+||+++.++.++|+|||.+..........
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~  157 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC  157 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence            11               0456789999999999999   8 999999999999999999999999999987765433221


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                         ....++..|+|||.+....++.++||||||+++|++++|..|+.....     ............. .....     
T Consensus       158 ---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~-~~~~~-----  223 (264)
T cd06623         158 ---NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDG-PPPSL-----  223 (264)
T ss_pred             ---cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcC-CCCCC-----
Confidence               124678899999999888899999999999999999999999865421     1122222222111 11000     


Q ss_pred             cCCCCCCChhhHH-HHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          235 VGEEGLMWPEKEQ-QLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       235 ~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                ... .+..+.+++.+||+.+|++|||+.++++.
T Consensus       224 ----------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         224 ----------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             ----------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                      111 33458899999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.7e-31  Score=228.62  Aligned_cols=212  Identities=18%  Similarity=0.213  Sum_probs=148.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCC------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFP------------------------------------------   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~------------------------------------------   91 (284)
                      +|...+.||.|++|.||+|..  ++..||+|++.....                                          
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            366778999999999999998  589999998764310                                          


Q ss_pred             --------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           92 --------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        92 --------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                          .......++.|++.||.|||   +.+|+|+||||+|||++.++.++|+|||++.......
T Consensus        81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~  157 (330)
T cd07834          81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE  157 (330)
T ss_pred             EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence                                00334568999999999999   9999999999999999999999999999998775543


Q ss_pred             ccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc-----
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES-----  225 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----  225 (284)
                      ..........++..|+|||++.+. .++.++||||||+++|+|++|..||.....     ......+........     
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~  232 (330)
T cd07834         158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY-----IDQLNLIVEVLGTPSEEDLK  232 (330)
T ss_pred             cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH-----HHHHHHHHHhcCCCChhHhh
Confidence            211112225678899999999887 789999999999999999999999865431     111111111100000     


Q ss_pred             ------ccccccccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          226 ------FKEIVDPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       226 ------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                            ....+.. ........+ .........+.+++.+||+.+|++|||+.+++..
T Consensus       233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         233 FITSEKARNYLKS-LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             hccccchhhHHhh-cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                  0000000 000000000 0011134557899999999999999999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=4.3e-31  Score=223.88  Aligned_cols=200  Identities=23%  Similarity=0.205  Sum_probs=146.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||.|++|.||++..  ++..+|+|.+...                                           
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            3577788999999999999999  6889999988643                                           


Q ss_pred             -CCCc-------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -FPFS-------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -~~~~-------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                       +|..                   .....++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence             1110                   234468999999999999   99999999999999999999999999999866543


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....     ...++..|+|||.+.+..++.++|||||||++|+|++|..||.........   ..+..... .......+
T Consensus       158 ~~~~-----~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~-~~~~~~~~  228 (287)
T cd06621         158 SLAG-----TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG---PIELLSYI-VNMPNPEL  228 (287)
T ss_pred             cccc-----cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCC---hHHHHHHH-hcCCchhh
Confidence            2211     145788999999998888999999999999999999999998754311111   11111111 11111111


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+. .        +........+.+++.+||+.+|++|||+.|++.
T Consensus       229 ~~~-~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         229 KDE-P--------GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             ccC-C--------CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            000 0        000122345889999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1e-31  Score=235.72  Aligned_cols=187  Identities=24%  Similarity=0.269  Sum_probs=148.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      ++.|.....+|.|+|+.|-++..  ++...+||++...                                          
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g  400 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDG  400 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccc
Confidence            45666777899999999999998  8889999998765                                          


Q ss_pred             ----------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE-ecCCcceeeccccccccCCCCccccCCC
Q 039895           90 ----------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        90 ----------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                ......+..|+.+|+.|+.|||   ++|+|||||||+|||+ ++.++++|+|||.++.......      
T Consensus       401 ~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~------  471 (612)
T KOG0603|consen  401 GELLRRIRSKPEFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD------  471 (612)
T ss_pred             cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhc------
Confidence                      0000345569999999999999   9999999999999999 6899999999999988765511      


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      +..-|..|.|||++....|+.++|+||||++||+|++|+.||.....  +      ..+...+..+.+.           
T Consensus       472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~--~------~ei~~~i~~~~~s-----------  532 (612)
T KOG0603|consen  472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA--G------IEIHTRIQMPKFS-----------  532 (612)
T ss_pred             ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc--h------HHHHHhhcCCccc-----------
Confidence            14568899999999988999999999999999999999999975431  1      1122222222222           


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                             ...+....+|+.+||+.||.+||++.++..
T Consensus       533 -------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  533 -------ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             -------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence                   233445789999999999999999999864

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=2.4e-32  Score=238.99  Aligned_cols=152  Identities=26%  Similarity=0.403  Sum_probs=119.3

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccccCCCCccccCCCCcccCccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR  172 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  172 (284)
                      .....|+.||++||.|||.. .++|+|||||.+||+|+. .|.+||+|+|+|..........     ..|||.|||||++
T Consensus       143 kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks-----vIGTPEFMAPEmY  216 (632)
T KOG0584|consen  143 KAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS-----VIGTPEFMAPEMY  216 (632)
T ss_pred             HHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccce-----eccCccccChHHH
Confidence            44567999999999999976 789999999999999974 5899999999998876543322     6899999999988


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          173 TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       173 ~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      . ..|+..+||||||++++||+|+..|+....    ....+..-+-....+..+..+-||                  ++
T Consensus       217 E-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~----n~AQIYKKV~SGiKP~sl~kV~dP------------------ev  273 (632)
T KOG0584|consen  217 E-ENYNELVDVYAFGMCMLEMVTSEYPYSECT----NPAQIYKKVTSGIKPAALSKVKDP------------------EV  273 (632)
T ss_pred             h-hhcchhhhhhhhhHHHHHHHhccCChhhhC----CHHHHHHHHHcCCCHHHhhccCCH------------------HH
Confidence            7 789999999999999999999999986432    222222222222233333333332                  27


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHH
Q 039895          253 TELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .++|.+|+.. .+.|||+.|+++
T Consensus       274 r~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  274 REFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHHHHhcC-chhccCHHHHhh
Confidence            8999999999 999999999985

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.97  E-value=4.6e-31  Score=224.00  Aligned_cols=187  Identities=18%  Similarity=0.258  Sum_probs=143.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..  +++.||+|++...                                           
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            3577788999999999999999  7899999988532                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ...+..++.|++.||.|||   +.+++|+||+|+|||++.++.++|+|||++.......  
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~--  155 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT--  155 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC--
Confidence             121               1456678999999999999   9999999999999999999999999999987765431  


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....|++.|+|||.+.+...+.++||||||+++|+|++|..||....        ......... .+...  +   
T Consensus       156 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~--~---  217 (290)
T cd05580         156 ----YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--------PIQIYEKIL-EGKVR--F---  217 (290)
T ss_pred             ----CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHh-cCCcc--C---
Confidence                12568899999999988888999999999999999999999986432        111111111 11100  0   


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                                 +......+.+++.+||+.+|.+||     ++.|+++
T Consensus       218 -----------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         218 -----------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             -----------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence                       011123478999999999999999     7777653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=4.6e-31  Score=225.98  Aligned_cols=187  Identities=22%  Similarity=0.304  Sum_probs=140.8

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------C
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------F   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~   90 (284)
                      |+..+.||+|+||.||+|..  ++..+|+|.+...                                            +
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            55567899999999999998  7788999987531                                            1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |.               ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.......    
T Consensus        97 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~----  169 (308)
T cd06634          97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN----  169 (308)
T ss_pred             cCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc----
Confidence            11               1455678999999999999   9999999999999999999999999999987654321    


Q ss_pred             CCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                         ...|++.|+|||.+.   ...++.++|||||||++|++++|..|+....        ......... ....+...  
T Consensus       170 ---~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~~--  235 (308)
T cd06634         170 ---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIA-QNESPALQ--  235 (308)
T ss_pred             ---cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc--------HHHHHHHHh-hcCCCCcC--
Confidence               146788999999874   3467889999999999999999999975421        011111111 11111100  


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                  .......+.+++.+||+.+|++||++.++++.
T Consensus       236 ------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         236 ------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             ------------cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence                        11233447899999999999999999998864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=2e-31  Score=230.55  Aligned_cols=212  Identities=16%  Similarity=0.225  Sum_probs=143.8

Q ss_pred             CCCCCCeeeecCCceEEEEEe--C--CcceEEEeecCC------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--Q--DRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~--~~~vavK~~~~~------------------------------------------   89 (284)
                      +|...+.||+|+||.||++..  .  +..||+|++...                                          
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            366678899999999999999  4  678999987532                                          


Q ss_pred             ------CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ------FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ------~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                            ++              .......++.||+.||.|||   ..+|+||||||+|||++.++.++|+|||++..+..
T Consensus        81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857          81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSE  157 (332)
T ss_pred             EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence                  00              01455678999999999999   99999999999999999999999999999987654


Q ss_pred             CCccc-cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---
Q 039895          150 GETHI-NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---  224 (284)
Q Consensus       150 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---  224 (284)
                      ..... .......||+.|+|||++.+ ..++.++||||+||++|++++|..||.....     ..............   
T Consensus       158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~  232 (332)
T cd07857         158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY-----VDQLNQILQVLGTPDEE  232 (332)
T ss_pred             ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH-----HHHHHHHHHHhCCCCHH
Confidence            32211 11122578999999998765 4688999999999999999999998864321     01111000000000   


Q ss_pred             cccccccc-------cccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 SFKEIVDP-------AIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+..+.++       .........++ ........+.+++.+||+.+|++|||+.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00000000       00000000000 00112345789999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=6.5e-31  Score=221.88  Aligned_cols=208  Identities=17%  Similarity=0.187  Sum_probs=146.2

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------CC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FP   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~   91 (284)
                      |+..+.||+|++|.||+|..  ++..+++|.+...                                           ++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            44567899999999999998  7889999987543                                           11


Q ss_pred             C---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 F---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      .               ...+..++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||.+.........   
T Consensus        81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~---  154 (283)
T cd05118          81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP---  154 (283)
T ss_pred             CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc---
Confidence            0               0455679999999999999   999999999999999999999999999998777544311   


Q ss_pred             CCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccccccc-
Q 039895          157 SNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEIVD-  231 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-  231 (284)
                      .....++..|+|||.+.+. .++.++||||+|+++|++++|+.||....     .......+.......   .+....+ 
T Consensus       155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (283)
T cd05118         155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS-----EIDQLFKIFRTLGTPDPEVWPKFTSL  229 (283)
T ss_pred             ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHcCCCchHhcccchhh
Confidence            1114578899999998776 78899999999999999999998885432     111111111110000   0000000 


Q ss_pred             -----ccccCCCCC-CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 -----PAIVGEEGL-MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 -----~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           ......... ...........+.+++.+||+.||.+||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence                 000000000 00112234566889999999999999999999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=2.4e-31  Score=229.64  Aligned_cols=213  Identities=17%  Similarity=0.198  Sum_probs=148.4

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------   89 (284)
                      ++..++++|+..+.||.|+||.||++..  ++..||+|++...                                     
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            4455788999999999999999999987  7889999987432                                     


Q ss_pred             -------CCC-------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -------FPF-------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -------~~~-------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                             ++.             ......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||.+.....
T Consensus        84 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~  160 (328)
T cd07856          84 DIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDP  160 (328)
T ss_pred             cEEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence                   000             0334568999999999999   99999999999999999999999999999875432


Q ss_pred             CCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-----
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-----  223 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----  223 (284)
                      ..      ....++..|+|||.+.+ ..++.++|||||||+++++++|..||....     .......+......     
T Consensus       161 ~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~-----~~~~~~~~~~~~~~~~~~~  229 (328)
T cd07856         161 QM------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKD-----HVNQFSIITDLLGTPPDDV  229 (328)
T ss_pred             Cc------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCHHH
Confidence            21      12467889999998765 568999999999999999999999885432     00000001010000     


Q ss_pred             ------CcccccccccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 ------ESFKEIVDPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                            ....+.+. .+......... ........+.+++.+||+.+|++|||+.+++..
T Consensus       230 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         230 INTICSENTLRFVQ-SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHhccchhhHHHHh-hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                  00000000 00000000000 001123568899999999999999999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.6e-31  Score=223.45  Aligned_cols=195  Identities=26%  Similarity=0.335  Sum_probs=150.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||.|.-|+||.+..  .+..+|+|++.+.                                           
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            3455567899999999999999  4589999999766                                           


Q ss_pred             -CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 -FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 -~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                       ||..                 .....++.+++.||+|||   -.|||.|||||+|||+.++|.+.|+||.++.......
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence             4443                 445568999999999999   9999999999999999999999999999875442100


Q ss_pred             c--------------------------------c---------------------ccCCCCcccCccccccccccCCCCC
Q 039895          152 T--------------------------------H---------------------INDSNRVIGTFGFMAPEYRTTGDFS  178 (284)
Q Consensus       152 ~--------------------------------~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~  178 (284)
                      +                                .                     ......++||-.|.|||++.+...+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence            0                                0                     0011247899999999999999999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHH
Q 039895          179 EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFK  258 (284)
Q Consensus       179 ~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (284)
                      .++|-|+|||++|||+.|..||.+..    .             ...+.+++-..      ..+|..+.....+.+||.+
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~----~-------------~~Tl~NIv~~~------l~Fp~~~~vs~~akDLIr~  370 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSN----N-------------KETLRNIVGQP------LKFPEEPEVSSAAKDLIRK  370 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCC----c-------------hhhHHHHhcCC------CcCCCCCcchhHHHHHHHH
Confidence            99999999999999999999998654    1             11122222111      1223333555668999999


Q ss_pred             hhcCCCCCCCC----HHHHHH
Q 039895          259 CLSESEGDRPT----IVQVAK  275 (284)
Q Consensus       259 cl~~~p~~Rps----~~ev~~  275 (284)
                      .|..||.+|..    +.||.+
T Consensus       371 LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  371 LLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             HhccChhhhhccccchHHhhc
Confidence            99999999997    777654

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=1.2e-30  Score=223.88  Aligned_cols=187  Identities=24%  Similarity=0.314  Sum_probs=140.1

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------C
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------F   90 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~   90 (284)
                      |...+.||+|+||.||+|..  +|..||+|++...                                            +
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            45567899999999999998  7889999998532                                            1


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |..               ..++.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++......     
T Consensus       103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~-----  174 (313)
T cd06633         103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA-----  174 (313)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC-----
Confidence            111               455678999999999999   999999999999999999999999999987543221     


Q ss_pred             CCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                        ....|+..|+|||++.   ...++.++|||||||++|+|++|..|+....        .......... ...+.... 
T Consensus       175 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~-~~~~~~~~-  242 (313)
T cd06633         175 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQ-NDSPTLQS-  242 (313)
T ss_pred             --CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHh-cCCCCCCc-
Confidence              1256889999999874   4568889999999999999999999986432        1111111111 11111100 


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                   ......+.+++.+||+.+|++||++.+++..
T Consensus       243 -------------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         243 -------------NEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             -------------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                         1112237789999999999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=3.3e-31  Score=230.13  Aligned_cols=214  Identities=16%  Similarity=0.171  Sum_probs=143.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------C----------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------F----------------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------~----------------   90 (284)
                      +.|...+.||.|+||.||+|..  +|..||+|++...                          +                
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            5688889999999999999998  7889999987442                          0                


Q ss_pred             -------------C-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-cCCcceeecccc
Q 039895           91 -------------P-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQLFDFTL  143 (284)
Q Consensus        91 -------------~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~Dfg~  143 (284)
                                   +             .+.....++.||+.||.|||   +.+|+||||||+||+++ .++.++++|||.
T Consensus        85 ~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~  161 (342)
T cd07854          85 LTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGL  161 (342)
T ss_pred             ccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCccc
Confidence                         0             00355678999999999999   89999999999999997 456789999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      +..+..............++..|+|||++.. ..++.++|||||||++|+|++|..||.....    .............
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~----~~~~~~~~~~~~~  237 (342)
T cd07854         162 ARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE----LEQMQLILESVPV  237 (342)
T ss_pred             ceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCC
Confidence            8766432222111122457889999997654 4678899999999999999999999964320    0000000000000


Q ss_pred             -----cCccccccccccc-CCCCCCChh---hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 -----NESFKEIVDPAIV-GEEGLMWPE---KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 -----~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           ...+......... .......+.   .......+.+++.+||+.||++|||+.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence                 0000000000000 000000000   0122345789999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=1.2e-30  Score=221.72  Aligned_cols=209  Identities=19%  Similarity=0.183  Sum_probs=141.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|++|.||+|..  +|+.||+|++...                                           
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            4678888999999999999998  7889999987532                                           


Q ss_pred             CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccccCCCCc
Q 039895           90 FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      ++                .......++.||+.||+|||   +.+++|+||+|+||+++. ++.+||+|||++........
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~  158 (294)
T PLN00009         82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR  158 (294)
T ss_pred             cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence            10                00234468899999999999   999999999999999985 55789999999876543211


Q ss_pred             cccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc-
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV-  230 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  230 (284)
                      .   .....+++.|+|||++.+. .++.++|||||||++|+|+||..||.....    .......... .... ..... 
T Consensus       159 ~---~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~----~~~~~~~~~~-~~~~-~~~~~~  229 (294)
T PLN00009        159 T---FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE----IDELFKIFRI-LGTP-NEETWP  229 (294)
T ss_pred             c---cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHH-hCCC-Chhhcc
Confidence            1   1124578899999987654 578999999999999999999999864320    0011111000 0000 00000 


Q ss_pred             ------cc--cccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 ------DP--AIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ------~~--~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            +-  .......... .........+.+++.+||+.+|++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        230 GVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             ccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  00  0000000000 001112334789999999999999999999985

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=6.7e-31  Score=222.11  Aligned_cols=210  Identities=15%  Similarity=0.219  Sum_probs=144.6

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~~   91 (284)
                      +|+..+.||.|++|.||+|..  +|..||+|++...                                          ++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            477788999999999999999  7889999987643                                          01


Q ss_pred             -----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           92 -----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        92 -----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                       .......++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||++......... 
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~-  156 (284)
T cd07836          81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT-  156 (284)
T ss_pred             CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc-
Confidence                             11445679999999999999   899999999999999999999999999998765432111 


Q ss_pred             cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc--Cccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN--ESFKEIVD  231 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  231 (284)
                        .....+++.|+|||++.+. .++.++||||||+++|++++|..||.....    ..............  ..+..+.+
T Consensus       157 --~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07836         157 --FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN----EDQLLKIFRIMGTPTESTWPGISQ  230 (284)
T ss_pred             --cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHHHhCCCChhhHHHHhc
Confidence              1124578899999987654 578899999999999999999999864321    11111111100000  00000000


Q ss_pred             -ccccCCCCCCCh-----hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 -PAIVGEEGLMWP-----EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 -~~~~~~~~~~~~-----~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       +.+.........     ........+.+++.+||+.+|.+||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             000000000000     01123455789999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=1.8e-30  Score=214.94  Aligned_cols=191  Identities=25%  Similarity=0.311  Sum_probs=145.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC-----------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF-----------------------------------------PF   92 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----------------------------------------~~   92 (284)
                      +|+..+.||+|++|.||++..  ++..+++|++....                                         +.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            366778999999999999999  58899999886541                                         11


Q ss_pred             ----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           93 ----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        93 ----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                      ......++.|++.||.|||   ..+++|+||+|+||+++.++.++|+|||.+........    
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----  153 (253)
T cd05122          81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----  153 (253)
T ss_pred             CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc----
Confidence                            1445678999999999999   89999999999999999999999999999877654432    


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      .....++..|+|||.+....++.++||||||++++++++|..|+....     .   ........ .........     
T Consensus       154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~---~~~~~~~~-~~~~~~~~~-----  219 (253)
T cd05122         154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP-----P---MKALFKIA-TNGPPGLRN-----  219 (253)
T ss_pred             ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc-----h---HHHHHHHH-hcCCCCcCc-----
Confidence            122568899999999988888999999999999999999999986432     0   11111110 011111100     


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              .......+.+++.+||+.+|++|||+.+++.
T Consensus       220 --------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         220 --------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             --------ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                    1111344889999999999999999999975

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=5.8e-31  Score=219.49  Aligned_cols=190  Identities=23%  Similarity=0.256  Sum_probs=144.6

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      +|...+.||.|+||.||+|..  ++..||+|++...                                            
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            466778999999999999999  6899999988643                                            


Q ss_pred             CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|               .......++.|++.||.|||   +.+++|+||+|+||++++++.++|+|||.+......... 
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-  156 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT-  156 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccc-
Confidence            11               01456778999999999999   999999999999999999999999999998776543211 


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                         ....|+..|+|||++....++.++|+||||+++|++++|..||......      ...........  ....     
T Consensus       157 ---~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~--~~~~-----  220 (258)
T cd05578         157 ---TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQET--ADVL-----  220 (258)
T ss_pred             ---cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhcc--cccc-----
Confidence               1256788999999998888999999999999999999999998654310      11111111110  0000     


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH--HHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI--VQVA  274 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~--~ev~  274 (284)
                               .+...+..+.+++.+||+.+|.+||++  .|++
T Consensus       221 ---------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         221 ---------YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             ---------CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence                     011223458899999999999999999  6654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.2e-31  Score=230.31  Aligned_cols=208  Identities=18%  Similarity=0.264  Sum_probs=146.1

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCC---------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFP---------------------------------------   91 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---------------------------------------   91 (284)
                      ..++|...+.||+|++|.||+|..  ++..||+|++.....                                       
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            457788889999999999999999  678999998753200                                       


Q ss_pred             -----------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           92 -----------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        92 -----------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                                             .......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++....
T Consensus        93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence                                   00345678999999999999   9999999999999999999999999999987664


Q ss_pred             CCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      ...      ....++..|+|||.+.+ ..++.++|||||||++|++++|..||....     .......+..... ....
T Consensus       170 ~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~-----~~~~~~~i~~~~~-~~~~  237 (343)
T cd07851         170 DEM------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSD-----HIDQLKRIMNLVG-TPDE  237 (343)
T ss_pred             ccc------cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhcC-CCCH
Confidence            331      12467889999998765 367899999999999999999999986432     1111111111000 0000


Q ss_pred             cccccc-----------ccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          228 EIVDPA-----------IVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       228 ~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+....           +.......+ .........+.+++.+||+.+|++|||+.+|+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            000000           000000000 000112456889999999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=6.2e-31  Score=228.45  Aligned_cols=210  Identities=16%  Similarity=0.219  Sum_probs=145.5

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF----------------------------------------   90 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----------------------------------------   90 (284)
                      ..+.|+..+.||+|+||.||++..  +|..||||++....                                        
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            456788889999999999999988  78999999885320                                        


Q ss_pred             ---------C-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           91 ---------P-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        91 ---------~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                               +             .......++.|++.||+|||   ..+|+||||||+||+++.++.++|+|||++....
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880          93 HDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence                     0             00345678999999999999   9999999999999999999999999999987654


Q ss_pred             CCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh-cCcc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE-NESF  226 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~  226 (284)
                      ....      ...+++.|+|||++.+ ..++.++|+||+|+++|++++|..||.....    ............. ...+
T Consensus       170 ~~~~------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~  239 (343)
T cd07880         170 SEMT------GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH----LDQLMEIMKVTGTPSKEF  239 (343)
T ss_pred             cCcc------ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCCCCHHH
Confidence            3221      1467889999998875 3588999999999999999999999864320    0001110000000 0000


Q ss_pred             ccccccc-----ccCCCCCCC----hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIVDPA-----IVGEEGLMW----PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...+...     .........    .........+.+++.+|++.||++|||+.+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         240 VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0000000     000000000    001122334789999999999999999999983

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.97  E-value=1.3e-30  Score=217.13  Aligned_cols=191  Identities=25%  Similarity=0.317  Sum_probs=144.5

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..+.||+|+||.||+|..  +|..+|+|.+...                                           +
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            466778999999999999999  6889999998532                                           1


Q ss_pred             C-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCCCCc
Q 039895           91 P-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~~~  152 (284)
                      +                 .+.....++.|++.||.|||   +.+++|+||+|+||+++.++ .++|+|||.+........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME  157 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence            1                 11456788999999999999   99999999999999999886 469999999877654322


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ..   ....|++.|+|||++....++.++||||||++++++++|..||....        ....+.... .......   
T Consensus       158 ~~---~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~---  222 (257)
T cd08225         158 LA---YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--------LHQLVLKIC-QGYFAPI---  222 (257)
T ss_pred             cc---cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHh-cccCCCC---
Confidence            11   11468899999999988889999999999999999999999985422        122222211 1111111   


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                  .......+.+++.+||+.+|++|||+.|+++.
T Consensus       223 ------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         223 ------------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             ------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence                        01112347899999999999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2.3e-30  Score=218.72  Aligned_cols=207  Identities=16%  Similarity=0.162  Sum_probs=142.4

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------CC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FP   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~   91 (284)
                      |...+.||+|++|+||+|..  +++.||+|.+...                                           +|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            45678899999999999999  6788999987543                                           11


Q ss_pred             C----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 F----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      .                ....+.++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++.........  
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~--  155 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY--  155 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc--
Confidence            0                0345778999999999999   999999999999999999999999999998766443221  


Q ss_pred             CCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---------c
Q 039895          156 DSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---------S  225 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~  225 (284)
                        ....++..|+|||++.. ..++.++|+||||++++++++|..||.....     ..............         .
T Consensus       156 --~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  228 (283)
T cd07830         156 --TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSE-----IDQLYKICSVLGTPTKQDWPEGYK  228 (283)
T ss_pred             --CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCCh-----HHHHHHHHHhcCCCChhhhhhHhh
Confidence              11467889999998754 4578999999999999999999988854320     00000000000000         0


Q ss_pred             ccccccccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .....+..+........ .........+.+++.+||+.+|++|||+.|++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            00000000000000000 000111345889999999999999999999975

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.97  E-value=1.7e-30  Score=219.97  Aligned_cols=195  Identities=21%  Similarity=0.321  Sum_probs=147.7

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------C
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------F   90 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~   90 (284)
                      .++.|+..+.||+|++|.||+|.+  ++..|++|++...                                        +
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            456677788999999999999999  5889999998643                                        1


Q ss_pred             C----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 P----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +                ....+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++......... 
T Consensus        97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-  172 (286)
T cd06614          97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK-  172 (286)
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh-
Confidence            1                11456779999999999999   999999999999999999999999999988665433211 


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                        .....++..|+|||++.+..++.++||||||+++|++++|..|+....        ......... .......     
T Consensus       173 --~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~-----  236 (286)
T cd06614         173 --RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP--------PLRALFLIT-TKGIPPL-----  236 (286)
T ss_pred             --hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hcCCCCC-----
Confidence              112457889999999988889999999999999999999999975322        011111111 1111110     


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              +........+.+++.+||+.+|..|||+.+++.
T Consensus       237 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         237 --------KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             --------cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence                    001113345889999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=3.1e-30  Score=214.56  Aligned_cols=188  Identities=21%  Similarity=0.251  Sum_probs=145.7

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..+.||+|+||.||++..  ++..+|+|.+...                                           +
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            467778999999999999988  7789999998643                                           0


Q ss_pred             C-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           91 P-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 ~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                      +                   .......++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++.......
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence            0                   00234578999999999999   9999999999999999999999999999997765541


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..     ...+++.|+|||.+.+..++.++|+||||+++|++++|..||....        ...... .........   
T Consensus       158 ~~-----~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--------~~~~~~-~~~~~~~~~---  220 (256)
T cd08530         158 AK-----TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS--------MQDLRY-KVQRGKYPP---  220 (256)
T ss_pred             cc-----cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH-HHhcCCCCC---
Confidence            11     1457889999999988889999999999999999999999986432        111111 111111111   


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  ........+.+++.+||+.+|++|||+.++++
T Consensus       221 ------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         221 ------------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             ------------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                        11233445889999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=1.3e-30  Score=220.91  Aligned_cols=199  Identities=22%  Similarity=0.252  Sum_probs=144.4

Q ss_pred             CCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC-----------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~-----------------------------------------   89 (284)
                      +|...+.||+|++|.||++..     ++..||+|.+...                                         
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            356678999999999999885     4678999988532                                         


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           ++.               ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++..+..
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  157 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA  157 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence                 110               0345568889999999999   99999999999999999999999999999877644


Q ss_pred             CCccccCCCCcccCccccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      ......  ....|+..|+|||.+.+..  .+.++||||||+++|+|++|..||....    ................   
T Consensus       158 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~----~~~~~~~~~~~~~~~~---  228 (288)
T cd05583         158 EEEERA--YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG----EQNSQSEISRRILKSK---  228 (288)
T ss_pred             cccccc--ccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc----ccchHHHHHHHHHccC---
Confidence            322211  1246889999999987654  7889999999999999999999985322    1111111111111100   


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                          +          +.+......+.+++.+||+.+|++|||+.++...|+..
T Consensus       229 ----~----------~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         229 ----P----------PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             ----C----------CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence                0          00111223478999999999999999998887766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-30  Score=239.70  Aligned_cols=162  Identities=25%  Similarity=0.362  Sum_probs=123.7

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                      ..+.++.|||.|++||+   +.++|||||-.+|||+..+..+||+|||+++................-+..|||||.+..
T Consensus       419 dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~  495 (609)
T KOG0200|consen  419 DLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD  495 (609)
T ss_pred             HHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc
Confidence            45789999999999999   999999999999999999999999999999977665554432211112456999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHH
Q 039895          175 GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE  254 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
                      ..|+.++||||||++|||++|...++++.-      ........ ....+.               +...+..|..++.+
T Consensus       496 ~~ft~kSDVWSfGI~L~EifsLG~~PYp~~------~~~~~l~~-~l~~G~---------------r~~~P~~c~~eiY~  553 (609)
T KOG0200|consen  496 RVFTSKSDVWSFGILLWEIFTLGGTPYPGI------PPTEELLE-FLKEGN---------------RMEQPEHCSDEIYD  553 (609)
T ss_pred             CcccccchhhHHHHHHHHHhhCCCCCCCCC------CcHHHHHH-HHhcCC---------------CCCCCCCCCHHHHH
Confidence            999999999999999999999544433221      11122211 222221               12234556677899


Q ss_pred             HHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          255 LAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       255 l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      +|..||+.+|++||++.++.+.++..+
T Consensus       554 iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  554 LMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             HHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            999999999999999999999999864

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=2.5e-30  Score=219.74  Aligned_cols=187  Identities=18%  Similarity=0.277  Sum_probs=140.4

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CCC-----
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FPF-----   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~~-----   92 (284)
                      ..||+|+||.||++..  ++..||+|++...                                         ++.     
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            4799999999999998  7889999987532                                         111     


Q ss_pred             ---------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccC
Q 039895           93 ---------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGT  163 (284)
Q Consensus        93 ---------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt  163 (284)
                               ......++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.........   .....|+
T Consensus       106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~  179 (292)
T cd06657         106 DIVTHTRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKSLVGT  179 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccccc---ccccccC
Confidence                     1455678999999999999   899999999999999999999999999988765432211   1225688


Q ss_pred             ccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCCh
Q 039895          164 FGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWP  243 (284)
Q Consensus       164 ~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
                      +.|+|||.+....++.++|+||||+++|++++|..||....        ..........  ...    +.+.        
T Consensus       180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~--------~~~~~~~~~~--~~~----~~~~--------  237 (292)
T cd06657         180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRD--NLP----PKLK--------  237 (292)
T ss_pred             ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh--hCC----cccC--------
Confidence            99999999888888999999999999999999999986432        1111111100  000    0000        


Q ss_pred             hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          244 EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       244 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ........+.+++.+||+.+|.+||++.+++.
T Consensus       238 ~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         238 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            00112234778999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.4e-32  Score=216.66  Aligned_cols=215  Identities=15%  Similarity=0.213  Sum_probs=149.2

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |....+||+|.||.||+|..  .|+.||+|+..-.                                             
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            44456899999999999998  7888999876431                                             


Q ss_pred             ------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 ------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 ------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                            +|..               ....+++.++..||.|+|   ...|+|||+||.|+||+.+|.+||+|||+++.+.
T Consensus        99 ~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~fs  175 (376)
T KOG0669|consen   99 FYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAFS  175 (376)
T ss_pred             eeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence                  1211               566789999999999999   9999999999999999999999999999998775


Q ss_pred             CCCccccC-CCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          149 EGETHIND-SNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       149 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ........ .+..+-|.+|++||.+.+. .|+++.|||.-||++.||+|+.+.+.+..  +.....++.........+.+
T Consensus       176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt--eqqql~~Is~LcGs~tkevW  253 (376)
T KOG0669|consen  176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT--EQQQLHLISQLCGSITKEVW  253 (376)
T ss_pred             cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCCh--HHHHHHHHHHHhccCCcccC
Confidence            44332221 1224569999999988776 68999999999999999999998876432  11112222222222222333


Q ss_pred             cccccccccCCC------CCCChhhHHHH------HHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          227 KEIVDPAIVGEE------GLMWPEKEQQL------LICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       227 ~~~~~~~~~~~~------~~~~~~~~~~~------~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      +++..-.+....      ...+....+..      +..++|+..++..||.+|++++++++.
T Consensus       254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            332211111000      00000011111      246799999999999999999998764

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.97  E-value=4.2e-32  Score=243.70  Aligned_cols=193  Identities=22%  Similarity=0.313  Sum_probs=148.4

Q ss_pred             CCCCCCeeeecCCce-EEEEEeCCcceEEEeecCC------------------------CCCc-----------------
Q 039895           56 DFDGGKVIMKCLFYK-LYKGFLQDRPISVMKFEDT------------------------FPFS-----------------   93 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~-Vy~~~~~~~~vavK~~~~~------------------------~~~~-----------------   93 (284)
                      -|+..+++|.|+.|+ ||+|.++|+.||||.+-..                        ||.+                 
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL  589 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSL  589 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhH
Confidence            356677899999995 7999999999999998655                        3433                 


Q ss_pred             ----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---C--CcceeeccccccccCCCCc
Q 039895           94 ----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---E--NVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        94 ----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~--~~~kl~Dfg~a~~~~~~~~  152 (284)
                                      ...+.++.|+++||++||   +.+||||||||.||||+.   +  ..++|+|||+++.+..+..
T Consensus       590 ~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  590 QDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             HHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence                            123568999999999999   999999999999999986   3  4689999999999988776


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG-KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      .........||-+|+|||++....-+.++||||+||++|.+++| .+||....         .....-...+..+..+. 
T Consensus       667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~---------~R~~NIl~~~~~L~~L~-  736 (903)
T KOG1027|consen  667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL---------ERQANILTGNYTLVHLE-  736 (903)
T ss_pred             hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH---------HhhhhhhcCccceeeec-
Confidence            66666668899999999999998888899999999999999997 66774321         00000000011111110 


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          .        ..++  +..+||.+|++.+|..||++.+|+.
T Consensus       737 ----~--------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  737 ----P--------LPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             ----c--------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence                0        1112  4779999999999999999999975

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=7.6e-30  Score=220.32  Aligned_cols=203  Identities=18%  Similarity=0.218  Sum_probs=136.5

Q ss_pred             eeeec--CCceEEEEEe--CCcceEEEeecCCC-------------------------------------------CC--
Q 039895           62 VIMKC--LFYKLYKGFL--QDRPISVMKFEDTF-------------------------------------------PF--   92 (284)
Q Consensus        62 ~lg~G--~~g~Vy~~~~--~~~~vavK~~~~~~-------------------------------------------~~--   92 (284)
                      .||+|  +||+||++..  .|+.||+|++....                                           +.  
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46666  8999999998  89999999986430                                           00  


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc----
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH----  153 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~----  153 (284)
                                     ......++.|++.||+|||   +.+|+||||||+|||++.++.++++||+.+.........    
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (328)
T cd08226          85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV  161 (328)
T ss_pred             CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence                           0233478999999999999   999999999999999999999999999865433211110    


Q ss_pred             ccCCCCcccCccccccccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc----
Q 039895          154 INDSNRVIGTFGFMAPEYRTTG--DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK----  227 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  227 (284)
                      ........++..|+|||++.+.  .++.++|||||||++|++++|..||.....       ..... .........    
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~-------~~~~~-~~~~~~~~~~~~~  233 (328)
T cd08226         162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLR-------TQMLL-QKLKGPPYSPLDI  233 (328)
T ss_pred             ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcCh-------HHHHH-HHhcCCCCCCccc
Confidence            0111112356779999998764  478999999999999999999999864320       00000 000000000    


Q ss_pred             -----------------------cccccc---ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          228 -----------------------EIVDPA---IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       228 -----------------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                             ......   .........+........+.+|+.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                                   000000   000001112233445667899999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5e-30  Score=212.92  Aligned_cols=190  Identities=24%  Similarity=0.380  Sum_probs=145.3

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCC------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFP------------------------------------------   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~------------------------------------------   91 (284)
                      +|+..+.||+|++|.||++..  ++..|++|.+.....                                          
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            366778999999999999988  678999999865411                                          


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      .......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||.+.........  
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--  155 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--  155 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--
Confidence                            11445679999999999999   999999999999999999999999999999877543321  


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                       .....++..|+|||......++.++||||+|++++++++|..|+....       ...... ... ...... +     
T Consensus       156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-------~~~~~~-~~~-~~~~~~-~-----  219 (254)
T cd06627         156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN-------PMAALF-RIV-QDDHPP-L-----  219 (254)
T ss_pred             -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHH-HHh-ccCCCC-C-----
Confidence             112467889999999887788999999999999999999999986422       111111 111 111100 0     


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               +......+.+++.+||..+|++|||+.+++.
T Consensus       220 ---------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         220 ---------PEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             ---------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence                     1112334789999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.97  E-value=2.8e-30  Score=215.85  Aligned_cols=185  Identities=19%  Similarity=0.242  Sum_probs=139.4

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCCCC-------------------------------------------------
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDTFP-------------------------------------------------   91 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------------------------------------------------   91 (284)
                      ||.|++|.||++..  ++..+|+|++.....                                                 
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            69999999999999  489999999864300                                                 


Q ss_pred             ----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcc
Q 039895           92 ----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        92 ----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++........    .....
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~----~~~~~  153 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK----TWTFC  153 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc----ccccc
Confidence                      00455678899999999999   99999999999999999999999999999987754321    11246


Q ss_pred             cCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCC
Q 039895          162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLM  241 (284)
Q Consensus       162 gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
                      |++.|+|||.+....++.++|+||||+++|++++|..||.....      ................              
T Consensus       154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~--------------  213 (262)
T cd05572         154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNGKL--------------  213 (262)
T ss_pred             CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCCCC--------------
Confidence            78899999998888899999999999999999999999864331      1111111111000000              


Q ss_pred             ChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          242 WPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       242 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                       ..+......+.+++.+||+.+|++||+     +.|+++
T Consensus       214 -~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         214 -EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             -CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence             001111345889999999999999999     677654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=6.9e-30  Score=219.12  Aligned_cols=170  Identities=20%  Similarity=0.291  Sum_probs=115.5

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc----ccCCCCcccCcccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH----INDSNRVIGTFGFMAP  169 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aP  169 (284)
                      .....++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||.+.........    ........++..|+||
T Consensus       101 ~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  177 (314)
T cd08216         101 LAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSP  177 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCH
Confidence            345678999999999999   999999999999999999999999999988765332211    1111224577889999


Q ss_pred             ccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc--------c----
Q 039895          170 EYRTTG--DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI--------V----  235 (284)
Q Consensus       170 E~~~~~--~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----  235 (284)
                      |++...  .++.++|||||||++|||++|..||.....       ........  .+.....++...        .    
T Consensus       178 E~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  248 (314)
T cd08216         178 EVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPA-------TQMLLEKV--RGTVPCLLDKSTYPLYEDSMSQSRS  248 (314)
T ss_pred             HHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHH--hccCccccccCchhhhcCCcCcccc
Confidence            998653  588999999999999999999999864320       01111110  000011000000        0    


Q ss_pred             ----C--CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          236 ----G--EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       236 ----~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          .  ...............+.+++.+||+.+|++|||+.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         249 SNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             cccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence                0  000001112233456789999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.97  E-value=3.7e-30  Score=214.95  Aligned_cols=189  Identities=21%  Similarity=0.293  Sum_probs=139.7

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CC-----
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FP-----   91 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~-----   91 (284)
                      ||.|+||.||++..  +|..+|+|++...                                            ++     
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999999999  5899999998543                                            11     


Q ss_pred             ----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc-----ccC
Q 039895           92 ----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-----IND  156 (284)
Q Consensus        92 ----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-----~~~  156 (284)
                                ....+..++.|++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.........     ...
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence                      11456679999999999999   999999999999999999999999999998765433211     001


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      .....++..|+|||.......+.++||||||++++++++|..||....        .......... +...         
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~---------  219 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET--------PEEIFQNILN-GKIE---------  219 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhc-CCcC---------
Confidence            122567889999999888888999999999999999999999986432        1111111111 1100         


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                           ++.....+..+.+++.+||+.+|++|||+.++.+.|
T Consensus       220 -----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         220 -----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             -----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence                 011111234578999999999999999995554444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=4.3e-32  Score=233.10  Aligned_cols=191  Identities=21%  Similarity=0.304  Sum_probs=147.7

Q ss_pred             HHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-CCCc---------------------------------
Q 039895           50 LKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-FPFS---------------------------------   93 (284)
Q Consensus        50 l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-~~~~---------------------------------   93 (284)
                      +....+-|. .+.||+|.||+||-|.+  +|+.||||++.+- ++..                                 
T Consensus       560 ~stvYQif~-devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  560 ISTVYQIFA-DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERV  638 (888)
T ss_pred             HHHHHHhhh-HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence            344445555 47999999999999999  9999999999765 0000                                 


Q ss_pred             -------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceeecccccc
Q 039895           94 -------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSL  145 (284)
Q Consensus        94 -------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~Dfg~a~  145 (284)
                                               .....++.||+.||+|||   .++|+|+||||+|||+.+..   .+||||||.|+
T Consensus       639 FVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR  715 (888)
T KOG4236|consen  639 FVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFAR  715 (888)
T ss_pred             EEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeecccccee
Confidence                                     233457899999999999   99999999999999997543   68999999999


Q ss_pred             ccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh---h
Q 039895          146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI---E  222 (284)
Q Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~  222 (284)
                      .+.......    +.+|||.|+|||++....|+...|+||+||++|--++|..||...       .++.+.++...   .
T Consensus       716 iIgEksFRr----sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-------EdIndQIQNAaFMyP  784 (888)
T KOG4236|consen  716 IIGEKSFRR----SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED-------EDINDQIQNAAFMYP  784 (888)
T ss_pred             ecchhhhhh----hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc-------cchhHHhhccccccC
Confidence            997655432    378999999999999999999999999999999999999998532       22333332211   1


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                      ...|                   .+.....++||...|+..-.+|.|.+..+
T Consensus       785 p~PW-------------------~eis~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  785 PNPW-------------------SEISPEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             CCch-------------------hhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            1111                   23344477899999999999999887654

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.97  E-value=2.9e-30  Score=217.62  Aligned_cols=185  Identities=18%  Similarity=0.259  Sum_probs=136.2

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CCC----
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FPF----   92 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~~----   92 (284)
                      ||+|+||+||++..  +|+.||+|++...                                            ++.    
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999988  7899999987532                                            110    


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                   ......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+.........    ..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~----~~  153 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI----KG  153 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcc----cc
Confidence                         0345668999999999999   999999999999999999999999999998765432111    12


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      ..++..|+|||++.+..++.++||||||++++++++|..||......    ......... ....      ..       
T Consensus       154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~-~~~~------~~-------  215 (277)
T cd05577         154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK----VEKEELKRR-TLEM------AV-------  215 (277)
T ss_pred             ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc----ccHHHHHhc-cccc------cc-------
Confidence            45788999999998888999999999999999999999998643310    001111100 0000      00       


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                         ..+......+.+++.+||+.+|++||     ++.+++.
T Consensus       216 ---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         216 ---EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             ---cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence               00111233478999999999999999     6666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=5.6e-31  Score=233.23  Aligned_cols=215  Identities=20%  Similarity=0.270  Sum_probs=153.0

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      +...+.||+|+||.||+|+.  .|+.||||.+...                                             
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            45567899999999999997  9999999999774                                             


Q ss_pred             ---CCCc------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe--cCC--cceeeccccc
Q 039895           90 ---FPFS------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ--EEN--VAQLFDFTLS  144 (284)
Q Consensus        90 ---~~~~------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~--~~kl~Dfg~a  144 (284)
                         ||..                  ...+.++.+++.||.|||   +++|+||||||.||++-  .+|  .-||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence               4443                  677889999999999999   99999999999999985  334  3599999999


Q ss_pred             cccCCCCccccCCCCcccCcccccccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh-
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE-  222 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-  222 (284)
                      +.+.++....    +.+||..|.+||++. ...|+..+|.|||||++|+++||..||.+..    .........+.... 
T Consensus       172 rel~d~s~~~----S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~----~pk~~~~~~~~~~tk  243 (732)
T KOG4250|consen  172 RELDDNSLFT----SLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG----GPKNNKEIMWHIITK  243 (732)
T ss_pred             ccCCCCCeee----eecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC----Cccccchhhhhhhcc
Confidence            9998776332    389999999999998 4789999999999999999999999997643    11111111111111 


Q ss_pred             -cCcccccccccccCC----CCCCChh--hHHHHHHHHHHHHHhhcCCCCCCC--CHHHHHHHHHHHHh
Q 039895          223 -NESFKEIVDPAIVGE----EGLMWPE--KEQQLLICTELAFKCLSESEGDRP--TIVQVAKQLRQIYQ  282 (284)
Q Consensus       223 -~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rp--s~~ev~~~L~~l~~  282 (284)
                       .....-..++...+.    .....|.  .......+-..+..+|..+|.+|-  ...+....+.+|+.
T Consensus       244 kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  244 KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence             111111111111100    0001111  122223355677778889999998  77777777777664

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=2.6e-32  Score=216.40  Aligned_cols=192  Identities=20%  Similarity=0.247  Sum_probs=139.5

Q ss_pred             CCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------CCCc-----
Q 039895           60 GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------FPFS-----   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------~~~~-----   93 (284)
                      ...||.|.||+|++-.+  .|+..|||.+...                                       .|.+     
T Consensus        69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~S  148 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDIS  148 (361)
T ss_pred             HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhh
Confidence            35799999999999988  8999999998755                                       1111     


Q ss_pred             ------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           94 ------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        94 ------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                        .-.-.|..-.+.||.||-+  ...|||||+||+|||++..|.+||||||++-.+..+-....
T Consensus       149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~  226 (361)
T KOG1006|consen  149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV  226 (361)
T ss_pred             HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence                              1111344456789999996  78899999999999999999999999999876644322211


Q ss_pred             CCCCcccCccccccccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTG--DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          -.|...|||||.+...  .|+.+|||||+|++|+|+.||..|+..-.       ...+.+.... .+..+.+..+.
T Consensus       227 ----daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-------svfeql~~Vv-~gdpp~l~~~~  294 (361)
T KOG1006|consen  227 ----DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-------SVFEQLCQVV-IGDPPILLFDK  294 (361)
T ss_pred             ----ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-------HHHHHHHHHH-cCCCCeecCcc
Confidence                4688999999987643  48999999999999999999999975322       1222222221 22222221111


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                ...+....+..++.-||..|.+.||...++.+
T Consensus       295 ----------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  295 ----------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             ----------cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence                      12234455889999999999999999998764

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=7.3e-30  Score=212.18  Aligned_cols=194  Identities=24%  Similarity=0.298  Sum_probs=147.6

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC-------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF-------------------------------------------   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-------------------------------------------   90 (284)
                      +|...+.||+|++|.||+|..  ++..|++|++....                                           
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            367778999999999999999  58899999875431                                           


Q ss_pred             --C---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 --P---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 --~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                        +               ....+..++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+.........
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence              0               00455779999999999999   899999999999999999999999999998877654321


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                       .......++..|+|||.+....++.++||||||++++++++|..||....       .................     
T Consensus       158 -~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~-----  224 (260)
T cd06606         158 -EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-------NPMAALYKIGSSGEPPE-----  224 (260)
T ss_pred             -ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------chHHHHHhccccCCCcC-----
Confidence             01112568899999999988889999999999999999999999986432       11111111110011111     


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                .+......+.+++.+||+.+|++||++.+++.
T Consensus       225 ----------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         225 ----------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             ----------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence                      11122445889999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=6.2e-30  Score=215.50  Aligned_cols=193  Identities=21%  Similarity=0.273  Sum_probs=146.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|..||+|++...                                           
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            3677788999999999999998  7899999998642                                           


Q ss_pred             --CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        ++               .......++.|++.||.|||   +.+++|+||+|+||+++.++.++++|||++........
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~  157 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS  157 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence              11               11467789999999999999   99999999999999999999999999999877654322


Q ss_pred             c-----------------ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHH
Q 039895          153 H-----------------INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       153 ~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~  215 (284)
                      .                 ........++..|+|||+.....++.++||||||++++++++|..||....        ...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~  229 (280)
T cd05581         158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN--------EYL  229 (280)
T ss_pred             cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc--------HHH
Confidence            1                 011123567889999999888889999999999999999999999986432        011


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH----HHHHH
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI----VQVAK  275 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~----~ev~~  275 (284)
                      ....... ..  ..              .+...+..+.+++.+||+.+|++|||+    .++++
T Consensus       230 ~~~~~~~-~~--~~--------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         230 TFQKILK-LE--YS--------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHHh-cC--CC--------------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            1111110 00  00              011113347899999999999999999    77654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=4.6e-30  Score=222.28  Aligned_cols=208  Identities=15%  Similarity=0.176  Sum_probs=141.4

Q ss_pred             CCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------------
Q 039895           60 GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------------   89 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------------   89 (284)
                      .+.||+|+||.||+|..  .+..||||++...                                                
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD   93 (335)
T ss_pred             hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence            56799999999999997  7899999987421                                                


Q ss_pred             -------CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 -------FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 -------~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                             ++              .......++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++....
T Consensus        94 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024         94 FINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             cEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccceeecc
Confidence                   00              01455679999999999999   9999999999999999999999999999987664


Q ss_pred             CCCc-----------cccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHH
Q 039895          149 EGET-----------HINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL  216 (284)
Q Consensus       149 ~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~  216 (284)
                      ....           .........+++.|+|||.+.+. .++.++|||||||++|+|++|..||....     .......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-----~~~~~~~  245 (335)
T PTZ00024        171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN-----EIDQLGR  245 (335)
T ss_pred             cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHH
Confidence            1110           00111123468889999988764 46899999999999999999999986433     1111111


Q ss_pred             HHHHhhcC---cccccccccc-----cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          217 VKKYIENE---SFKEIVDPAI-----VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       217 ~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +.......   .++...+...     .................+.+++.+||+.+|++|||+.|++.
T Consensus       246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            11111111   0111100000     00000000001122445789999999999999999999985

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=4.6e-30  Score=213.42  Aligned_cols=190  Identities=26%  Similarity=0.356  Sum_probs=145.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|...+.||.|+||.||++..  ++..+|+|++...                                           +
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            466778999999999999999  5899999998643                                           1


Q ss_pred             CC-------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           91 PF-------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 ~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                      |.                   ......++.+++.||.|||   +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            11                   0345678999999999999   8999999999999999999999999999987765443


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..   .....|++.|+|||.+....++.++||||+|++++++++|..|+....        ......... ......+  
T Consensus       158 ~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~--  223 (258)
T cd08215         158 DL---AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--------LLELALKIL-KGQYPPI--  223 (258)
T ss_pred             ce---ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc--------HHHHHHHHh-cCCCCCC--
Confidence            11   112468889999999888889999999999999999999999985422        112221111 1111110  


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                   +......+.+++.+||..+|++|||+.++++
T Consensus       224 -------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         224 -------------PSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             -------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                         1122234789999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=8.5e-30  Score=214.98  Aligned_cols=208  Identities=19%  Similarity=0.218  Sum_probs=143.8

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------CC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FP   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~   91 (284)
                      |+....||+|++|.||+|..  +++.+|+|++...                                           ++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            45567899999999999999  6899999988753                                           00


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 ---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                     ....+..++.|++.||.|||   +.+|+|+||+|+||+++.++.++|+|||++..........  
T Consensus        81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~--  155 (282)
T cd07829          81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY--  155 (282)
T ss_pred             CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc--
Confidence                           01445778999999999999   8999999999999999999999999999987765432211  


Q ss_pred             CCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc---Ccccccc--
Q 039895          157 SNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN---ESFKEIV--  230 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--  230 (284)
                       ....++..|+|||.+... .++.++|||||||+++|+++|..||....    . ......+......   ..+..+.  
T Consensus       156 -~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~  229 (282)
T cd07829         156 -THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS----E-IDQLFKIFQILGTPTEESWPGVTKL  229 (282)
T ss_pred             -CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc----H-HHHHHHHHHHhCCCcHHHHHhhccc
Confidence             113457789999998766 78899999999999999999988885432    0 1111111111000   0000000  


Q ss_pred             ---cccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 ---DPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ---~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                         +........... .........+.+++.+||+.+|++||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence               000000000000 000112445889999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=5.3e-30  Score=217.45  Aligned_cols=194  Identities=22%  Similarity=0.291  Sum_probs=140.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC-----------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~-----------------------------------------   89 (284)
                      +|+..+.||+|+||.||++..     +|..||+|++...                                         
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            466778999999999999986     6788999988642                                         


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           ++.               ......++.|++.||.|||   +.+++||||+|+|||++.++.++|+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  157 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE  157 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence                 110               0344567779999999999   99999999999999999999999999999877644


Q ss_pred             CCccccCCCCcccCccccccccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTG--DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      .....  .....|+..|+|||.+...  .++.++||||||+++|++++|..||....    .................  
T Consensus       158 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~----~~~~~~~~~~~~~~~~~--  229 (290)
T cd05613         158 DEVER--AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG----EKNSQAEISRRILKSEP--  229 (290)
T ss_pred             ccccc--cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC----ccccHHHHHHHhhccCC--
Confidence            32211  1125688999999988653  46789999999999999999999985322    11111222211111000  


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                                     +.+......+.+++.+||+.+|++||     ++.+++.
T Consensus       230 ---------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         230 ---------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             ---------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence                           00111233478999999999999997     6666654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-30  Score=196.24  Aligned_cols=211  Identities=15%  Similarity=0.202  Sum_probs=145.7

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|+..++||+|.||+||+|..  ++..||+|.+.-.                                           +
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            455567899999999999998  7889999998644                                           3


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |..               ....+++.|+++||.|+|   +.+++||||||.|+||+.+|.+|++|||+++.+.-..... 
T Consensus        83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvrcy-  158 (292)
T KOG0662|consen   83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY-  158 (292)
T ss_pred             hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEee-
Confidence            322               445678999999999999   9999999999999999999999999999998876443211 


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH--hhcCcccccc--
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY--IENESFKEIV--  230 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--  230 (284)
                        +..+-|.+|.+|+++.+. -|++..|+||-||++.|+.....|.++..   .....+....+..  .....++.+.  
T Consensus       159 --saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~---dvddqlkrif~~lg~p~ed~wps~t~l  233 (292)
T KOG0662|consen  159 --SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN---DVDDQLKRIFRLLGTPTEDQWPSMTKL  233 (292)
T ss_pred             --eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC---cHHHHHHHHHHHhCCCccccCCccccC
Confidence              114568999999998876 48999999999999999988655554332   1111122212111  1122233221  


Q ss_pred             -cccccCCCCC--CChh-hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 -DPAIVGEEGL--MWPE-KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 -~~~~~~~~~~--~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       |-.....+..  .|.. .+.....=.+++++.+.-+|..|.++++.++
T Consensus       234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence             1111111000  0000 1111122358899999999999999998875

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-30  Score=217.76  Aligned_cols=183  Identities=23%  Similarity=0.291  Sum_probs=142.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------CCCc--------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------FPFS--------   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------~~~~--------   93 (284)
                      .+|....+||+|+||.|..|..  +...+|||++++.                               .|..        
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            4688889999999999999998  6678999999876                               1111        


Q ss_pred             ---------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           94 ---------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        94 ---------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                                           ...+-+|.+||-||-+||   +++|+.||||.+|||+|.+|.+||+|||+.+.---+  
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~--  503 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD--  503 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccccC--
Confidence                                 455678999999999999   999999999999999999999999999998653222  


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (284)
                       ..++.+++|||.|+|||++...+|+.++|-|||||+||||+.|++||+++.    +    .+..+..... ..+     
T Consensus       504 -~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD----E----~elF~aI~ehnvsy-----  569 (683)
T KOG0696|consen  504 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED----E----DELFQAIMEHNVSY-----  569 (683)
T ss_pred             -CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC----H----HHHHHHHHHccCcC-----
Confidence             222334899999999999999999999999999999999999999998643    1    1112221111 111     


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT  269 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  269 (284)
                                   +...+.+..++....|...|.+|..
T Consensus       570 -------------PKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  570 -------------PKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             -------------cccccHHHHHHHHHHhhcCCccccC
Confidence                         1222334667888888999999864

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.5e-31  Score=211.09  Aligned_cols=212  Identities=15%  Similarity=0.231  Sum_probs=147.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------CCCc-----------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------FPFS-----------------------   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------~~~~-----------------------   93 (284)
                      .+.+..+.||-|.||.||-.++  +|+.||+|++-..                .|+-                       
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            3567789999999999999999  8999999988544                1100                       


Q ss_pred             -----------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           94 -----------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        94 -----------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                                             ....-++.||++||.|||   +.+|+||||||.|+|+++|..+||||||+++.....
T Consensus       133 YV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d  209 (449)
T KOG0664|consen  133 YVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR  209 (449)
T ss_pred             HHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchh
Confidence                                   334457899999999999   999999999999999999999999999999887654


Q ss_pred             CccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-----
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-----  224 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----  224 (284)
                      .....+.  .+-|..|+|||++.+. .|+.+.||||+||++.|++..+..|....     .....+++.......     
T Consensus       210 ~~~hMTq--EVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~-----PiqQL~lItdLLGTPs~EaM  282 (449)
T KOG0664|consen  210 DRLNMTH--EVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG-----PIEQLQMIIDLLGTPSQEAM  282 (449)
T ss_pred             hhhhhHH--HHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC-----hHHHHHHHHHHhCCCcHHHH
Confidence            4433332  4568899999999876 58999999999999999998888776433     111122222211111     


Q ss_pred             ------ccccccccccc-CCCCCCC--hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          225 ------SFKEIVDPAIV-GEEGLMW--PEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       225 ------~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                            .-..++..... ......+  ......-.+...+...++..||+.|.+..+.+..
T Consensus       283 r~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  283 KYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             HHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence                  11111111000 0000000  0011222335678888999999999998887654

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.96  E-value=4.3e-29  Score=208.46  Aligned_cols=188  Identities=18%  Similarity=0.223  Sum_probs=138.5

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||.||++..  .+..+++|+++..                                             
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            66678999999999999988  4455666665421                                             


Q ss_pred             -CCC-------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -FPF-------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -~~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                       ++.                   +...+.++.|++.||.|||   +.+++|+||+|+||+++. +.++|+|||++.....
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~  157 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG  157 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecCC
Confidence             111                   1345678999999999999   999999999999999975 5699999999876643


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....   .....|++.|+|||.+....++.++|+||||+++|++++|..||....        ......... .+..+. 
T Consensus       158 ~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~--------~~~~~~~~~-~~~~~~-  224 (260)
T cd08222         158 SCDL---ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN--------FLSVVLRIV-EGPTPS-  224 (260)
T ss_pred             Cccc---ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHH-cCCCCC-
Confidence            3221   112467889999999888888999999999999999999999985322        111111111 111110 


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                    .+......+.+++.+||..+|++||++.++++
T Consensus       225 --------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         225 --------------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             --------------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence                          11223345789999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.7e-30  Score=210.44  Aligned_cols=184  Identities=24%  Similarity=0.310  Sum_probs=143.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------CCCc
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------FPFS   93 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------~~~~   93 (284)
                      .++|+..++||+|.||.|-.+.-  .|+.+|+|++++.                                      .|+-
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            36899999999999999999988  8999999999876                                      1110


Q ss_pred             ---------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           94 ---------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        94 ---------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                                           .....+-..|+.||.|||   +.+||.||||.+|+|+|.+|.+||+|||+.+.--.   
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~---  320 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK---  320 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhccc---
Confidence                                 233457789999999999   99999999999999999999999999999865322   


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ......+++|||.|+|||++....|+.++|-|.+||++|||++|+.||+...     ...+..++..  ..-.++.    
T Consensus       321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d-----h~kLFeLIl~--ed~kFPr----  389 (516)
T KOG0690|consen  321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD-----HEKLFELILM--EDLKFPR----  389 (516)
T ss_pred             ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc-----hhHHHHHHHh--hhccCCc----
Confidence            2222334899999999999999999999999999999999999999998533     2222222211  1111211    


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP  268 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  268 (284)
                                    ...++...|+...|..||.+|.
T Consensus       390 --------------~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  390 --------------TLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             --------------cCCHHHHHHHHHHhhcChHhhc
Confidence                          1222366888899999999996

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=3.6e-30  Score=224.96  Aligned_cols=193  Identities=23%  Similarity=0.263  Sum_probs=155.4

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------   89 (284)
                      ..-+..|.....||+|.|+.|..|++  ++..||+|++.+.                                       
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            34457788999999999999999999  8999999999776                                       


Q ss_pred             ----CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ----FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ----~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                          |+..               .....++.|+.+|++|||   +++|||||||+.|||++.+.++||+|||++..+..+
T Consensus       132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~  208 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG  208 (596)
T ss_pred             EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeeccc
Confidence                1111               455678999999999999   999999999999999999999999999999988755


Q ss_pred             CccccCCCCcccCccccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....    +.+|++.|.|||++.+..|+ +.+|+||+|+++|-|+.|.-||++..                     +.++
T Consensus       209 ~~lq----t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~---------------------lk~L  263 (596)
T KOG0586|consen  209 LMLQ----TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN---------------------LKEL  263 (596)
T ss_pred             cccc----ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc---------------------cccc
Confidence            4332    27899999999999988775 78999999999999999999997543                     2222


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      -++.+.+.....+.    ...++.++++++|-.+|.+|++++++..
T Consensus       264 r~rvl~gk~rIp~~----ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  264 RPRVLRGKYRIPFY----MSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             cchheeeeecccce----eechhHHHHHHhhccCccccCCHHHhhh
Confidence            22333333222222    2223778999999999999999999875

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.9e-30  Score=220.83  Aligned_cols=184  Identities=20%  Similarity=0.268  Sum_probs=144.7

Q ss_pred             CCCCCCeeeecCCceEEEEEeCCcc--eEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFLQDRP--ISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~~~~~--vavK~~~~~--------------------------------------------   89 (284)
                      +++....||-||||.|=....++..  +|+|++++.                                            
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            3444457999999999998884444  899998766                                            


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      .|..               .+...++..+++|++|||   .++||.|||||+|.+++.+|.+||.|||+|+.+.++....
T Consensus       501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTw  577 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTW  577 (732)
T ss_pred             hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCCcee
Confidence            1111               344567889999999999   9999999999999999999999999999999997765432


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                          +++|||.|.|||++.....+.++|.||+|+++|||++|.+||.+..     ++...+.+...+..-.++.      
T Consensus       578 ----TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d-----pmktYn~ILkGid~i~~Pr------  642 (732)
T KOG0614|consen  578 ----TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD-----PMKTYNLILKGIDKIEFPR------  642 (732)
T ss_pred             ----eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc-----hHHHHHHHHhhhhhhhccc------
Confidence                3899999999999999999999999999999999999999997543     3444444444333222221      


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT  269 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  269 (284)
                                  .......+|+.+....+|.+|..
T Consensus       643 ------------~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  643 ------------RITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             ------------ccchhHHHHHHHHHhcCcHhhhc
Confidence                        22223678999999999999975

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=1.7e-29  Score=208.29  Aligned_cols=168  Identities=20%  Similarity=0.184  Sum_probs=128.9

Q ss_pred             cCCceEEEEEe--CCcceEEEeecCC------------------------------------CCC---------------
Q 039895           66 CLFYKLYKGFL--QDRPISVMKFEDT------------------------------------FPF---------------   92 (284)
Q Consensus        66 G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------~~~---------------   92 (284)
                      |.+|.||++..  +++.+|+|.+...                                    ++.               
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   83 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIP   83 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCC
Confidence            89999999999  8899999998754                                    111               


Q ss_pred             chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccc
Q 039895           93 SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR  172 (284)
Q Consensus        93 ~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  172 (284)
                      ......++.|++.||.|||   +.+|+||||||+||+++.++.++++|||.+........      ...++..|+|||.+
T Consensus        84 ~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~------~~~~~~~y~aPE~~  154 (237)
T cd05576          84 EECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD------GEAVENMYCAPEVG  154 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccc------cCCcCccccCCccc
Confidence            1445678999999999999   99999999999999999999999999998766543221      13457789999999


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          173 TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       173 ~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      ....++.++||||+|+++||+++|..|+......                   ........          .+......+
T Consensus       155 ~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-------------------~~~~~~~~----------~~~~~~~~~  205 (237)
T cd05576         155 GISEETEACDWWSLGAILFELLTGKTLVECHPSG-------------------INTHTTLN----------IPEWVSEEA  205 (237)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-------------------cccccccC----------CcccCCHHH
Confidence            8888999999999999999999999876432100                   00000000          011123347


Q ss_pred             HHHHHHhhcCCCCCCCCHH
Q 039895          253 TELAFKCLSESEGDRPTIV  271 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~  271 (284)
                      .+++.+||+.||++||++.
T Consensus       206 ~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         206 RSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             HHHHHHHccCCHHHhcCCC
Confidence            8999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.96  E-value=4.1e-29  Score=233.57  Aligned_cols=88  Identities=28%  Similarity=0.423  Sum_probs=76.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+  +++.||+|++...                                           
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5678889999999999999999  6899999998642                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                       ++.               ....+.++.||+.||.|||   ..+|+||||||+|||++.++.+||+|||+++
T Consensus        84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence             111               1346789999999999999   8999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-30  Score=219.58  Aligned_cols=198  Identities=23%  Similarity=0.344  Sum_probs=146.6

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------CC
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------FP   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~~   91 (284)
                      |-..++||+|||+.||++.+  ..+.||||+-...                                           ||
T Consensus       465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC  544 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC  544 (775)
T ss_pred             HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence            33456899999999999999  8899999986543                                           22


Q ss_pred             ------Cc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceeecccccccc
Q 039895           92 ------FS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSI  147 (284)
Q Consensus        92 ------~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~Dfg~a~~~  147 (284)
                            ..               .....|++||+.||.||.+. +.+|||-||||.|||+-+   -|.+||+|||+++.+
T Consensus       545 TVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM  623 (775)
T KOG1151|consen  545 TVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM  623 (775)
T ss_pred             eeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence                  21               55678999999999999976 789999999999999964   467899999999998


Q ss_pred             CCCCcccc----CCCCcccCccccccccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHH
Q 039895          148 PEGETHIN----DSNRVIGTFGFMAPEYRTTG----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK  219 (284)
Q Consensus       148 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~  219 (284)
                      ........    -+....||.+|++||.+.-+    .++.++||||+|||+|.++.|+.||....       ..++....
T Consensus       624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq-------sQQdILqe  696 (775)
T KOG1151|consen  624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ-------SQQDILQE  696 (775)
T ss_pred             cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch-------hHHHHHhh
Confidence            76543322    22346799999999987644    47899999999999999999999985321       11111111


Q ss_pred             HhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                      .    .+        .......+|..+....+..++|.+||++.-++|....++.
T Consensus       697 N----TI--------lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  697 N----TI--------LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             h----ch--------hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            1    11        1111122333344555678999999999999998887764

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-30  Score=239.79  Aligned_cols=196  Identities=23%  Similarity=0.323  Sum_probs=149.6

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      .-++|...++||+|+||.|..+.+  +++.+|.|++.+-                                         
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence            346899999999999999999999  8899999998763                                         


Q ss_pred             ----CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ----FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ----~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                          +|              .+.....++..|+.||.-||   +.|+|||||||+|||||.+|.+||+|||....+....
T Consensus       153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG  229 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG  229 (1317)
T ss_pred             EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCCCC
Confidence                00              11455668899999999999   9999999999999999999999999999988877555


Q ss_pred             ccccCCCCcccCccccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ......  .+|||.|.+||++..     +.|+..+|-||+||++|||+.|..||+...        +..-.......   
T Consensus       230 ~V~s~~--aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads--------lveTY~KIm~h---  296 (1317)
T KOG0612|consen  230 TVRSSV--AVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS--------LVETYGKIMNH---  296 (1317)
T ss_pred             cEEecc--ccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH--------HHHHHHHHhch---
Confidence            444433  799999999998752     568999999999999999999999998643        22222222111   


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC---HHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT---IVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~ev~~  275 (284)
                                .....+|.....+....+||.+.+. +|+.|..   +.++..
T Consensus       297 ----------k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~  337 (1317)
T KOG0612|consen  297 ----------KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN  337 (1317)
T ss_pred             ----------hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence                      1111223333455567788877654 6677776   777654

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.1e-28  Score=204.47  Aligned_cols=179  Identities=24%  Similarity=0.310  Sum_probs=136.6

Q ss_pred             eeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------CC-----
Q 039895           63 IMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------FP-----   91 (284)
Q Consensus        63 lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------~~-----   91 (284)
                      ||.|+||.||++..  ++..+|+|.+...                                            ++     
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            68999999999998  6899999987643                                            11     


Q ss_pred             ----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcc
Q 039895           92 ----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        92 ----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                .......++.|++.||.|||   +.+++|+||+|+||+++.++.++|+|||++........   ......
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~  154 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS---RTNTFC  154 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC---cccCCc
Confidence                      11456778999999999999   99999999999999999999999999999877644321   112256


Q ss_pred             cCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCC
Q 039895          162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLM  241 (284)
Q Consensus       162 gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
                      ++..|+|||...+...+.++|+||||+++|++++|..||....     .   ......... ...               
T Consensus       155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~---~~~~~~~~~-~~~---------------  210 (250)
T cd05123         155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED-----R---KEIYEKILK-DPL---------------  210 (250)
T ss_pred             CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----H---HHHHHHHhc-CCC---------------
Confidence            7889999999988888999999999999999999999985432     1   111111111 000               


Q ss_pred             ChhhHHHHHHHHHHHHHhhcCCCCCCCCHHH
Q 039895          242 WPEKEQQLLICTELAFKCLSESEGDRPTIVQ  272 (284)
Q Consensus       242 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  272 (284)
                       +.+...+..+.+++.+||..||++|||+.+
T Consensus       211 -~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         211 -RFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             -CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence             001111334789999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=206.26  Aligned_cols=210  Identities=20%  Similarity=0.264  Sum_probs=149.5

Q ss_pred             cHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------
Q 039895           46 SADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------   89 (284)
Q Consensus        46 ~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------   89 (284)
                      +++|+-+.|.     .+||+|+++.|--+..  +|..+|||++.+.                                  
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            3667666664     5899999999999887  9999999999876                                  


Q ss_pred             -----------------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceeecccc
Q 039895           90 -----------------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTL  143 (284)
Q Consensus        90 -----------------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~Dfg~  143 (284)
                                             +..+...-++..+|+.||.|||   .+||.||||||+|||..+..   -+|||||.+
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL  225 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDL  225 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeecccc
Confidence                                   2222556689999999999999   99999999999999997654   469999988


Q ss_pred             ccccCCC----CccccCCCCcccCcccccccccc---C--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC-----Cc
Q 039895          144 SLSIPEG----ETHINDSNRVIGTFGFMAPEYRT---T--GDFSEKSDVYSFGALLLELLTGKKISYSSHFDD-----GE  209 (284)
Q Consensus       144 a~~~~~~----~~~~~~~~~~~gt~~y~aPE~~~---~--~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~-----~~  209 (284)
                      +..+.-.    ........+.+|+..|||||+..   +  ..|+.++|.||+|||+|-|++|.+||.+..-.+     ++
T Consensus       226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe  305 (463)
T KOG0607|consen  226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE  305 (463)
T ss_pred             ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence            7654321    12222334578999999999743   2  358899999999999999999999997654221     11


Q ss_pred             cccH-HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          210 DYRL-QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       210 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .-.. ++..-..+..+.            +..........+.+..+++...|..++.+|.++.++++
T Consensus       306 ~Cr~CQ~~LFesIQEGk------------YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  306 VCRVCQNKLFESIQEGK------------YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             ccHHHHHHHHHHHhccC------------CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            1111 111111111111            11111112344556778999999999999999999876

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-29  Score=193.54  Aligned_cols=144  Identities=24%  Similarity=0.280  Sum_probs=116.0

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------CCCc-----------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------FPFS-----------------   93 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------~~~~-----------------   93 (284)
                      ..++......||+|++|.|=+-++  +|...|+|.+...                    .|.-                 
T Consensus        44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc  123 (282)
T KOG0984|consen   44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC  123 (282)
T ss_pred             chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence            334555566799999998766665  9999999998755                    1111                 


Q ss_pred             ------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           94 ------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        94 ------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                                              .-.-+||..+..||.|||+  ...++|||+||+||||+.+|.+|+||||.+-.+.+
T Consensus       124 ME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  124 MELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             HHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence                                    2233689999999999996  67899999999999999999999999999977765


Q ss_pred             CCccccCCCCcccCccccccccccC----CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTT----GDFSEKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwS~G~il~elltg~~p~~~  202 (284)
                      +.....    ..|...|||||.+..    ..|+.++||||+|++++||.+++.|+..
T Consensus       202 SiAkt~----daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  202 SIAKTM----DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             hhHHHH----hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence            433322    357889999998753    3689999999999999999999999854

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=3.5e-28  Score=217.73  Aligned_cols=160  Identities=16%  Similarity=0.215  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG  175 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (284)
                      ...++.|++.||.|||   ..+|+||||||+|||++.++.+||+|||++...........  ....+|+.|+|||.+...
T Consensus       311 ~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~--~~g~~tp~Y~aPE~l~~~  385 (507)
T PLN03224        311 IKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNP--LYGMLDPRYSPPEELVMP  385 (507)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCc--cccCCCcceeChhhhcCC
Confidence            3457889999999999   89999999999999999999999999999976543322111  113457899999987532


Q ss_pred             C--------------------C--CcchhHHHHHHHHHHHHhCCC-CCCCCCCCCCc----cccHHHHHHHHhhcCcccc
Q 039895          176 D--------------------F--SEKSDVYSFGALLLELLTGKK-ISYSSHFDDGE----DYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       176 ~--------------------~--~~~~DvwS~G~il~elltg~~-p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  228 (284)
                      .                    +  ..+.||||+||++++|++|.. |+.........    ......|..  .....   
T Consensus       386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~~~~---  460 (507)
T PLN03224        386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YKGQK---  460 (507)
T ss_pred             CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hcccC---
Confidence            2                    1  124799999999999999875 54321100000    000111100  00000   


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCC---CCCCCHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESE---GDRPTIVQVAKQ  276 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~Rps~~ev~~~  276 (284)
                                 ..++..........+|+.++|..+|   .+|+|+.|++++
T Consensus       461 -----------~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        461 -----------YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             -----------CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence                       0111112233457899999999766   689999999863

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.95  E-value=3.3e-29  Score=208.49  Aligned_cols=160  Identities=23%  Similarity=0.311  Sum_probs=126.3

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  173 (284)
                      .+.+.++.|++.|++|||   ..+|||.||-.+|.+||+.-.+||+|=.+++.+-+..+..-.. ....+..||+||.+.
T Consensus       396 ~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGD-nEnRPvkWMslEal~  471 (563)
T KOG1024|consen  396 IQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGD-NENRPVKWMSLEALQ  471 (563)
T ss_pred             HHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccchhccccCcccccccCC-CCCCcccccCHHHHh
Confidence            456778999999999999   9999999999999999999999999999999886655442211 133477899999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          174 TGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       174 ~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      ...|+.++||||||+++|||+| |+.|+....     +....    .++..+               .+...+..|++++
T Consensus       472 n~~yssasDvWsfGVllWELmtlg~~PyaeID-----PfEm~----~ylkdG---------------yRlaQP~NCPDeL  527 (563)
T KOG1024|consen  472 NSHYSSASDVWSFGVLLWELMTLGKLPYAEID-----PFEME----HYLKDG---------------YRLAQPFNCPDEL  527 (563)
T ss_pred             hhhhcchhhhHHHHHHHHHHHhcCCCCccccC-----HHHHH----HHHhcc---------------ceecCCCCCcHHH
Confidence            9999999999999999999998 677764322     11111    111111               1122345677889


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          253 TELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      ..+|..||...|++||+++|++.-|.+..
T Consensus       528 f~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  528 FTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             HHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            99999999999999999999999988764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=6.9e-28  Score=189.60  Aligned_cols=155  Identities=19%  Similarity=0.173  Sum_probs=114.0

Q ss_pred             CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccccccc
Q 039895           92 FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEY  171 (284)
Q Consensus        92 ~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  171 (284)
                      .+.....++.|++.||.|||   +.+      ||+|||++.++.+++  ||++.......        ..||+.|+|||+
T Consensus        15 ~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--------~~g~~~y~aPE~   75 (176)
T smart00750       15 NEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ--------SRVDPYFMAPEV   75 (176)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc--------CCCcccccChHH
Confidence            34677899999999999999   666      999999999999999  99987654322        257899999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHH--
Q 039895          172 RTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQL--  249 (284)
Q Consensus       172 ~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  249 (284)
                      +.+..++.++|||||||++|||++|..||....   .....+........ ..      ++..       .+......  
T Consensus        76 ~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~---~~~~~~~~~~~~~~-~~------~~~~-------~~~~~~~~~~  138 (176)
T smart00750       76 IQGQSYTEKADIYSLGITLYEALDYELPYNEER---ELSAILEILLNGMP-AD------DPRD-------RSNLESVSAA  138 (176)
T ss_pred             hcCCCCcchhhHHHHHHHHHHHHhCCCCccccc---hhcHHHHHHHHHhc-cC------Cccc-------cccHHHHHhh
Confidence            999999999999999999999999999985432   00111111111100 00      0000       00111222  


Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          250 LICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       250 ~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      ..+.+++.+||+.+|++|||+.|+++.+..+..
T Consensus       139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      139 RSFADFMRVCASRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             hhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence            258899999999999999999999999887754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=8.7e-28  Score=217.08  Aligned_cols=204  Identities=25%  Similarity=0.311  Sum_probs=159.2

Q ss_pred             eecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------
Q 039895           44 SFSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------   89 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------   89 (284)
                      .+.++.+...++-|.....||.|.+|.||+++.  +|+.+|||+....                                
T Consensus         8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            344555566778899999999999999999988  8999999998655                                


Q ss_pred             --------------CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 --------------FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 --------------~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                                    +|..                 ....-|+..++.||.+||   ...++|||+|-.|||++.++.+|+
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEE
Confidence                          4443                 345568999999999999   999999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      +|||++..+.++....   .+.+||+.|||||++...     .|+..+|+||+|++..||.-|.+|+.....       .
T Consensus       165 vDFGvSaQldsT~grR---nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-------m  234 (953)
T KOG0587|consen  165 VDFGVSAQLDSTVGRR---NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-------M  234 (953)
T ss_pred             eeeeeeeeeecccccc---cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-------h
Confidence            9999998887654433   347899999999997643     478899999999999999999999865431       0


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..++       .++.-..|.+        -.+..-...+.+++..||..|-++||++.++++
T Consensus       235 raLF-------~IpRNPPPkL--------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  235 RALF-------LIPRNPPPKL--------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             hhhc-------cCCCCCCccc--------cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            0000       0011111111        113455667899999999999999999998875

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.95  E-value=1.2e-28  Score=211.60  Aligned_cols=210  Identities=21%  Similarity=0.209  Sum_probs=149.1

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CCCc-
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FPFS-   93 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~~~-   93 (284)
                      |......|+|-||+|.+|.+  .|..||||++...                                        .|.- 
T Consensus       434 Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVF  513 (752)
T KOG0670|consen  434 YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVF  513 (752)
T ss_pred             eEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEe
Confidence            44444578999999999999  6789999999876                                        1111 


Q ss_pred             ----------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-CcceeeccccccccCCC
Q 039895           94 ----------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        94 ----------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~~~~~~  150 (284)
                                            .....++.|+..||..|-   ..+|+|.||||+|||+++. ..+||||||.|......
T Consensus       514 E~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en  590 (752)
T KOG0670|consen  514 EPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASEN  590 (752)
T ss_pred             hhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccccccccc
Confidence                                  455679999999999999   9999999999999999865 46899999999877654


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHH-----HhhcCc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK-----YIENES  225 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~  225 (284)
                      ....     +.-+..|.|||++.+.+|+...|+||+||+||||.||+..|.+..  .+....+..-+..     ++..+.
T Consensus       591 eitP-----YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~T--NN~MLrl~me~KGk~p~KmlRKgq  663 (752)
T KOG0670|consen  591 EITP-----YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRT--NNQMLRLFMELKGKFPNKMLRKGQ  663 (752)
T ss_pred             cccH-----HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCC--cHHHHHHHHHhcCCCcHHHhhhcc
Confidence            4321     344678999999999999999999999999999999999987644  1111111100000     000011


Q ss_pred             cc-ccccccc----------------------cCC---------CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q 039895          226 FK-EIVDPAI----------------------VGE---------EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV  273 (284)
Q Consensus       226 ~~-~~~~~~~----------------------~~~---------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  273 (284)
                      +. ..+|..+                      .+.         ..............+.+|+..||..||++|.|..++
T Consensus       664 F~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqA  743 (752)
T KOG0670|consen  664 FKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQA  743 (752)
T ss_pred             hhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHH
Confidence            00 0001000                      000         001122345667778999999999999999999998


Q ss_pred             HHH
Q 039895          274 AKQ  276 (284)
Q Consensus       274 ~~~  276 (284)
                      +++
T Consensus       744 L~H  746 (752)
T KOG0670|consen  744 LKH  746 (752)
T ss_pred             hcC
Confidence            753

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=2.9e-28  Score=189.79  Aligned_cols=211  Identities=17%  Similarity=0.258  Sum_probs=150.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------CC--------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------FP--------------------------   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------~~--------------------------   91 (284)
                      .++|+..+++|+|.++.||.|..  +...++||++++.              .|                          
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~  116 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY  116 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence            35677788999999999999996  8889999999765              00                          


Q ss_pred             -------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccccCCCCccccCC
Q 039895           92 -------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 -------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                   .......++.+++.||.|+|   ++||+|||+||.|++||. ...++|.|+|+|.....+.....  
T Consensus       117 v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV--  191 (338)
T KOG0668|consen  117 VNNTDFKQLYPTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--  191 (338)
T ss_pred             hccccHHHHhhhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeee--
Confidence                         01445668999999999999   999999999999999995 45789999999998877665443  


Q ss_pred             CCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-------ccccc
Q 039895          158 NRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-------SFKEI  229 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  229 (284)
                        .+.+..|..||.+... .|+...|+|||||++..|+-.+.||+...   .....+...+. .+...       ...-.
T Consensus       192 --RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~---dN~DQLVkIak-VLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  192 --RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH---DNYDQLVKIAK-VLGTDELYAYLNKYQID  265 (338)
T ss_pred             --eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCC---CCHHHHHHHHH-HhChHHHHHHHHHHccC
Confidence              4567788999987654 58999999999999999999999997543   11111111111 11100       01111


Q ss_pred             ccccccC----CCCCCChh-----hH-HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVG----EEGLMWPE-----KE-QQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~----~~~~~~~~-----~~-~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +||....    .....|..     .. -..++..+++.+.|.+|.++|||+.|.+.
T Consensus       266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            2222211    11111111     11 12356889999999999999999999875

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.4e-27  Score=202.06  Aligned_cols=115  Identities=18%  Similarity=0.226  Sum_probs=73.7

Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC--CccccHHHHHHHHh-------hcCc-ccccc
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD--GEDYRLQDLVKKYI-------ENES-FKEIV  230 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~-------~~~~-~~~~~  230 (284)
                      .-|..|+|||++.+..|++.+||||++|++|||+||-..|.+..-..  .+...+...+.-..       ..+. ..+.+
T Consensus       412 IQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFF  491 (590)
T KOG1290|consen  412 IQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFF  491 (590)
T ss_pred             hhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhh
Confidence            34678999999999999999999999999999999999987643111  11112222221110       0111 11111


Q ss_pred             ccc--ccCCC-CCCChh----------hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPA--IVGEE-GLMWPE----------KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~--~~~~~-~~~~~~----------~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +..  +.... -..||.          +.+....+.+++.-||+.+|++||||.+.++
T Consensus       492 nr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  492 NRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             ccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            111  00000 012322          4566777999999999999999999999874

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.94  E-value=2.8e-26  Score=188.57  Aligned_cols=181  Identities=27%  Similarity=0.316  Sum_probs=135.7

Q ss_pred             CCceEEEEEe--CCcceEEEeecCCC------------------------------------------------------
Q 039895           67 LFYKLYKGFL--QDRPISVMKFEDTF------------------------------------------------------   90 (284)
Q Consensus        67 ~~g~Vy~~~~--~~~~vavK~~~~~~------------------------------------------------------   90 (284)
                      +||.||+|..  +|..+|+|++....                                                      
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            5899999999  57899999986430                                                      


Q ss_pred             ---CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccc
Q 039895           91 ---PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFM  167 (284)
Q Consensus        91 ---~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  167 (284)
                         ........++.+++.++.|||   ..+++|+||+|+||+++.++.++|+|||.+.........    ....++..|+
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~  153 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLL----TTFVGTPEYM  153 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccccc----ccccCCcCCC
Confidence               111455679999999999999   899999999999999999999999999999877554211    1256788999


Q ss_pred             ccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHH
Q 039895          168 APEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQ  247 (284)
Q Consensus       168 aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
                      +||.+....++.++||||||++++++++|..|+....    .   ...... ...........             ....
T Consensus       154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~---~~~~~~-~~~~~~~~~~~-------------~~~~  212 (244)
T smart00220      154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD----Q---LLELFK-KIGKPKPPFPP-------------PEWK  212 (244)
T ss_pred             CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----c---HHHHHH-HHhccCCCCcc-------------cccc
Confidence            9999988888999999999999999999999885421    1   111111 11111110000             0000


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          248 QLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       248 ~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....+.+++.+||..+|++||++.++++
T Consensus       213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      213 ISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             CCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            2344889999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3e-27  Score=193.62  Aligned_cols=145  Identities=22%  Similarity=0.308  Sum_probs=124.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------CCCc-------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------FPFS-------   93 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------~~~~-------   93 (284)
                      .++|+..++||+|+|+.|..+.+  +.+.+|+|++++.                               .|+.       
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            47899999999999999999998  8899999998766                               1111       


Q ss_pred             ----------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           94 ----------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        94 ----------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                                            .....+...|+.||.|||   +.||+.||||.+|+|+|..|.+|++|+|+.+.--...
T Consensus       329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g  405 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence                                  334557889999999999   9999999999999999999999999999886532221


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                         ..+++++|||.|.|||++.+..|...+|-|++||+++||+.|+.||+--.
T Consensus       406 ---d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivg  455 (593)
T KOG0695|consen  406 ---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVG  455 (593)
T ss_pred             ---cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceec
Confidence               12234899999999999999999999999999999999999999997544

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=2.9e-27  Score=192.13  Aligned_cols=205  Identities=22%  Similarity=0.313  Sum_probs=144.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCCCc----------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFPFS----------------------------------------   93 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~----------------------------------------   93 (284)
                      .|.....+|.|.- .|-.+.+  .+++||+|+....+-..                                        
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            3444567888888 6777777  89999999886541111                                        


Q ss_pred             ---------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           94 ---------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        94 ---------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                                           .....|..|++.|++|||   +.+|+||||||+||++..++.+||.|||+|+.....  
T Consensus        97 y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--  171 (369)
T KOG0665|consen   97 YLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--  171 (369)
T ss_pred             HHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCcc--
Confidence                                 445578999999999999   999999999999999999999999999999876544  


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc--------------cccHHHHHH
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE--------------DYRLQDLVK  218 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~--------------~~~~~~~~~  218 (284)
                      ...+  -.+.|..|.|||++.+..+...+||||+||++.||++|...|.+..-.+..              -..+...++
T Consensus       172 ~~mt--pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r  249 (369)
T KOG0665|consen  172 FMMT--PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR  249 (369)
T ss_pred             cccC--chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence            1222  267899999999999888999999999999999999999888643211100              011112222


Q ss_pred             HHhhcC------cccccccccccCCCCCCChh----hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          219 KYIENE------SFKEIVDPAIVGEEGLMWPE----KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       219 ~~~~~~------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+..+.      .+.+.+..       ..|+.    +.-....+.+++.+||-.+|++|.|++++++
T Consensus       250 ~yv~~~~~y~~~~f~~~fpD-------~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  250 NYVENRPQYQAISFSELFPD-------SLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             HHhhcChHhhccchhhhCCc-------ccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence            222110      01111100       01111    1112233678999999999999999999985

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.94  E-value=3.1e-27  Score=225.63  Aligned_cols=154  Identities=16%  Similarity=0.193  Sum_probs=107.7

Q ss_pred             chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-------------------CCcceeeccccccccCCCCc-
Q 039895           93 SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-------------------ENVAQLFDFTLSLSIPEGET-  152 (284)
Q Consensus        93 ~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-------------------~~~~kl~Dfg~a~~~~~~~~-  152 (284)
                      ....+.++.||+.||.|||   +++|+||||||+|||++.                   ++.+|++|||+++....... 
T Consensus        79 ~~~~~~i~~qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~  155 (793)
T PLN00181         79 AFECFHVFRQIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSER  155 (793)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccccccccccc
Confidence            3567889999999999999   999999999999999954                   45667777777764321000 


Q ss_pred             ------------cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          153 ------------HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       153 ------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                                  .........||+.|||||++.+..++.++|||||||++|||++|..|+....      ......... 
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~~~~~~~-  228 (793)
T PLN00181        156 RIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTMSSLRHR-  228 (793)
T ss_pred             chhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHHHHHHHh-
Confidence                        0000112458999999999999999999999999999999999877653211      001111000 


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              ...+.           ..........++.+||+.+|.+|||+.||++
T Consensus       229 --------~~~~~-----------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        229 --------VLPPQ-----------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             --------hcChh-----------hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence                    00000           0111223567888999999999999999975

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.93  E-value=5.2e-26  Score=191.01  Aligned_cols=152  Identities=24%  Similarity=0.278  Sum_probs=118.2

Q ss_pred             HHHHhcCCCCCCeeeecCCceEEEEEe-C----CcceEEEeecCC--------------------------CCCc-----
Q 039895           50 LKTATDDFDGGKVIMKCLFYKLYKGFL-Q----DRPISVMKFEDT--------------------------FPFS-----   93 (284)
Q Consensus        50 l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~----~~~vavK~~~~~--------------------------~~~~-----   93 (284)
                      +....+.|...++||+|+|++||+++. +    ++.||+|.+...                          .|..     
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v  110 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV  110 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence            344556788899999999999999998 3    578999988655                          1111     


Q ss_pred             ---------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccccCCC-
Q 039895           94 ---------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEG-  150 (284)
Q Consensus        94 ---------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~-  150 (284)
                                           ..+..++..++.||.++|   ..|||||||||+|+|.+. .+.-.|.|||+|...... 
T Consensus       111 ~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~  187 (418)
T KOG1167|consen  111 AIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ  187 (418)
T ss_pred             EEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence                                 567789999999999999   999999999999999984 356689999998721100 


Q ss_pred             ------C------cc---------------------c-------cCCCCcccCccccccccccCC-CCCcchhHHHHHHH
Q 039895          151 ------E------TH---------------------I-------NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGAL  189 (284)
Q Consensus       151 ------~------~~---------------------~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~i  189 (284)
                            .      ..                     .       .......||++|.|||++... ..++++||||.||+
T Consensus       188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI  267 (418)
T KOG1167|consen  188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI  267 (418)
T ss_pred             hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence                  0      00                     0       000124699999999998765 46889999999999


Q ss_pred             HHHHHhCCCCCCCCC
Q 039895          190 LLELLTGKKISYSSH  204 (284)
Q Consensus       190 l~elltg~~p~~~~~  204 (284)
                      ++-++++..||+...
T Consensus       268 ~Lslls~~~PFf~a~  282 (418)
T KOG1167|consen  268 LLSLLSRRYPFFKAK  282 (418)
T ss_pred             eehhhccccccccCc
Confidence            999999999997654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2.2e-25  Score=195.62  Aligned_cols=156  Identities=22%  Similarity=0.266  Sum_probs=119.5

Q ss_pred             cHHHHHHHh---cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------C
Q 039895           46 SADELKTAT---DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------F   90 (284)
Q Consensus        46 ~~~~l~~~~---~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------~   90 (284)
                      +|-.|+.+-   ..|...+.||-|+||.|..+.-  +...+|.|-+.+.                              |
T Consensus       617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy  696 (1034)
T KOG0608|consen  617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY  696 (1034)
T ss_pred             hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence            344444442   3577778899999999999876  5566777766544                              0


Q ss_pred             -----------------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           91 -----------------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        91 -----------------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                                                   ..+.....++.++.+|+++.|   ..|+|||||||+|||||.+|.+||+||
T Consensus       697 SFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDF  773 (1034)
T KOG0608|consen  697 SFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDF  773 (1034)
T ss_pred             EeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeec
Confidence                                         000233456789999999999   999999999999999999999999999


Q ss_pred             ccccccCC---------CCccc------------------------------cCCCCcccCccccccccccCCCCCcchh
Q 039895          142 TLSLSIPE---------GETHI------------------------------NDSNRVIGTFGFMAPEYRTTGDFSEKSD  182 (284)
Q Consensus       142 g~a~~~~~---------~~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~D  182 (284)
                      |+..-+.-         +....                              ...-..+||+.|+|||++....|+..+|
T Consensus       774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd  853 (1034)
T KOG0608|consen  774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD  853 (1034)
T ss_pred             cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence            99754410         00000                              0001358999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Q 039895          183 VYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       183 vwS~G~il~elltg~~p~~~~~  204 (284)
                      -||.|||||||+.|+.||....
T Consensus       854 wws~gvil~em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  854 WWSVGVILYEMLVGQPPFLADT  875 (1034)
T ss_pred             hhHhhHHHHHHhhCCCCccCCC
Confidence            9999999999999999997544

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=5.7e-25  Score=175.37  Aligned_cols=198  Identities=21%  Similarity=0.224  Sum_probs=138.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|.||.+..+.+  ....+++|.+...                                          
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            35677788999999999999999  6678999987655                                          


Q ss_pred             CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec--CCcceeeccccccccCCCCcc
Q 039895           90 FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE--ENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +|..              ....+++.|+++||.|+|   ++++||||||.+||||-.  ...+|+||||+.+..+.....
T Consensus       103 ~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~  179 (378)
T KOG1345|consen  103 FAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY  179 (378)
T ss_pred             cCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence            1110              345679999999999999   999999999999999953  347999999998776544332


Q ss_pred             ccCCCCcccCccccccccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTG-----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                            .--+..|.|||+....     ..++.+|||.||++++.++||+.|+......+..-..+..|....  ...++.
T Consensus       180 ------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk--~~~~P~  251 (378)
T KOG1345|consen  180 ------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK--NPALPK  251 (378)
T ss_pred             ------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc--CccCch
Confidence                  2235668899976533     356889999999999999999999975443222222222222211  111111


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                      .+.               ...+.+..+..+-|..+|++|=-+.++.++.
T Consensus       252 ~F~---------------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r  285 (378)
T KOG1345|consen  252 KFN---------------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMR  285 (378)
T ss_pred             hhc---------------ccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence            111               1122366788888999999995555555443

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.91  E-value=6e-25  Score=190.96  Aligned_cols=140  Identities=17%  Similarity=0.294  Sum_probs=121.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      .+|...+.+|+|+||.|+.|.+  +...|+||.+.+.                                           
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            4688889999999999999999  6678999988766                                           


Q ss_pred             -------------------------CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           90 -------------------------FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        90 -------------------------~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                                               .-.+....-|+.|++.|+++||   +.+|||||||-+|+.++.+|-+||.|||.+
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfgsa  717 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFGSA  717 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeeccch
Confidence                                     0011455669999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCccccCCCCcccCccccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCC
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~G~il~elltg~~p~~~  202 (284)
                      ....+++...     ++||..|.|||++.+.+|- ..-|||++|++||.++....|++.
T Consensus       718 a~~ksgpfd~-----f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  718 AYTKSGPFDV-----FVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhhcCCCcce-----eeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            8777665543     7899999999999998874 668999999999999999888863

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.91  E-value=1.8e-23  Score=167.86  Aligned_cols=152  Identities=27%  Similarity=0.419  Sum_probs=127.6

Q ss_pred             eeecCCceEEEEEeC--CcceEEEeecCCCCC------------------------------------------------
Q 039895           63 IMKCLFYKLYKGFLQ--DRPISVMKFEDTFPF------------------------------------------------   92 (284)
Q Consensus        63 lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~------------------------------------------------   92 (284)
                      ||+|++|.||++...  +..+++|++......                                                
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999994  899999998755221                                                


Q ss_pred             ----------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccccCCCCccccCCCCcc
Q 039895           93 ----------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEGETHINDSNRVI  161 (284)
Q Consensus        93 ----------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  161 (284)
                                ...+..++.+++.+|.+||   ..+++|+||+|.||+++. ++.++|+|||.+........   ......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~  154 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---LLKTIV  154 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---hhhccc
Confidence                      0345678999999999999   899999999999999999 89999999999877654321   111145


Q ss_pred             cCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCC
Q 039895          162 GTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL  240 (284)
Q Consensus       162 gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
                      +...|++||.+... .++.++|+|++|++++++                                               
T Consensus       155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------------------  187 (215)
T cd00180         155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------------------  187 (215)
T ss_pred             CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence            78889999998877 788999999999999998                                               


Q ss_pred             CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                               ..+.+++..|++.+|++||++.++++.
T Consensus       188 ---------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ---------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ---------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                     126789999999999999999999865

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.90  E-value=2.2e-24  Score=190.16  Aligned_cols=196  Identities=21%  Similarity=0.280  Sum_probs=146.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      -++|.....+|+|.+|.||++++  .+.+.|+|+++-.                                         |
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy   93 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY   93 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence            46788889999999999999999  8999999998754                                         3


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |..               .+....+...+.||.|||   +++-+|||||-.|||+++.|.+|++|||.+-.+....   .
T Consensus        94 cgggslQdiy~~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati---~  167 (829)
T KOG0576|consen   94 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI---A  167 (829)
T ss_pred             cCCCcccceeeecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhhh---h
Confidence            332               344556888999999999   9999999999999999999999999999987765332   2


Q ss_pred             CCCCcccCccccccccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYR---TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ....+.||+.|||||+.   ..+.|+..+|||++|+...|+---++|.+...       ..........      ..+++
T Consensus       168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-------pmr~l~LmTk------S~~qp  234 (829)
T KOG0576|consen  168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-------PMRALFLMTK------SGFQP  234 (829)
T ss_pred             hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-------hHHHHHHhhc------cCCCC
Confidence            33347899999999975   35579999999999999999988777754322       1111111111      11111


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .-..+       ...-.+.+.+++..|+-.+|.+|||+..++.
T Consensus       235 p~lkD-------k~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  235 PTLKD-------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             CcccC-------CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            11111       1122334779999999999999999987654

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.88  E-value=6.6e-22  Score=160.95  Aligned_cols=141  Identities=28%  Similarity=0.337  Sum_probs=116.2

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCC-------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFP-------------------------------------------   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------------------------------------------   91 (284)
                      |+..+.||+|++|.||++..  ++..+|+|.+.....                                           
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            45678999999999999999  478999999875311                                           


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 ---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                     .......++.+++.+|.+||   ..+++|+||+|.||+++.++.++|+|||.+.........  .
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~--~  155 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA--L  155 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc--c
Confidence                           11335678999999999999   889999999999999999999999999998877544311  1


Q ss_pred             CCCcccCccccccccc-cCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 039895          157 SNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYS  202 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~G~il~elltg~~p~~~  202 (284)
                      .....++..|++||.+ ....++.++|||+||++++++++|+.||+.
T Consensus       156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            1125678889999998 666788899999999999999999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.85  E-value=1.8e-21  Score=161.31  Aligned_cols=136  Identities=21%  Similarity=0.244  Sum_probs=91.0

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  173 (284)
                      ..++.+..|+++.+++||   ..|++|+||+|+|++++.+|.+.|+||+...........      ...+..|.|||...
T Consensus       145 ~arl~lT~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~------~~~~~~~~PPe~~~  215 (288)
T PF14531_consen  145 AARLSLTVQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC------SEFPVAFTPPELES  215 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG------GGS-TTTS-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec------cCCCcccCChhhhh
Confidence            345667789999999999   999999999999999999999999999877655432221      12357789999753


Q ss_pred             C--------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhh
Q 039895          174 T--------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEK  245 (284)
Q Consensus       174 ~--------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
                      .        -.++.+.|.|++|+++|.+.++..||...........                     .+. .       .
T Consensus       216 ~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------------------~f~-~-------C  266 (288)
T PF14531_consen  216 CAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------------------DFS-R-------C  266 (288)
T ss_dssp             HHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---------------------GGT-T-------S
T ss_pred             hhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---------------------cch-h-------c
Confidence            3        2478899999999999999999999864331111100                     010 1       1


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCC
Q 039895          246 EQQLLICTELAFKCLSESEGDR  267 (284)
Q Consensus       246 ~~~~~~~~~l~~~cl~~~p~~R  267 (284)
                      .+.++.+..||..+|+.+|.+|
T Consensus       267 ~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  267 RDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             S---HHHHHHHHHHT-SSGGGS
T ss_pred             CCcCHHHHHHHHHHccCCcccC
Confidence            1444558899999999999988

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.85  E-value=2e-21  Score=155.42  Aligned_cols=188  Identities=18%  Similarity=0.183  Sum_probs=136.3

Q ss_pred             CCeeeecCCceEEEEEeCCcceEEEeecCCCCCc----------------------------------------------
Q 039895           60 GKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFS----------------------------------------------   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~----------------------------------------------   93 (284)
                      ..+|.+...|..|+|.|+|..+++|++....|..                                              
T Consensus       195 ~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl  274 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL  274 (448)
T ss_pred             hhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence            3468889999999999999999999987652211                                              


Q ss_pred             --------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceee--ccccccccCCCCccccCC
Q 039895           94 --------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF--DFTLSLSIPEGETHINDS  157 (284)
Q Consensus        94 --------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~--Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .+.++++.++++|++|||+. +.-|..--|.+..++||++.+++|+  |--++.+.        ..
T Consensus       275 ynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe--------~g  345 (448)
T KOG0195|consen  275 YNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE--------VG  345 (448)
T ss_pred             HHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec--------cc
Confidence                          67889999999999999964 3445556799999999999988875  32222111        00


Q ss_pred             CCcccCccccccccccCCCCC---cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          158 NRVIGTFGFMAPEYRTTGDFS---EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~---~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                        ..-+|.||+||.+...+-+   .++|+|||++++||+.|...||......+-.         ..+.-+.+.--+    
T Consensus       346 --r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg---------mkialeglrv~i----  410 (448)
T KOG0195|consen  346 --RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG---------MKIALEGLRVHI----  410 (448)
T ss_pred             --cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh---------hhhhhccccccC----
Confidence              2347899999998876543   5799999999999999999999754311111         000011111112    


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                                ++.....+.+||.-|++.||.+||.++.|+..|+++.
T Consensus       411 ----------ppgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  411 ----------PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ----------CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence                      2223334789999999999999999999999999874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=4.5e-21  Score=175.58  Aligned_cols=162  Identities=19%  Similarity=0.184  Sum_probs=119.5

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc-ccCCCCcccCcccccccccc
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~  173 (284)
                      .+-.++.|++.|++|+|   +.||.|||+|++|+++..+|.+||+|||.+..+...... ........|+..|+|||++.
T Consensus       421 e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~  497 (601)
T KOG0590|consen  421 EADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLT  497 (601)
T ss_pred             hhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccccc
Confidence            34468999999999999   999999999999999999999999999998766433221 11222378999999999999


Q ss_pred             CCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          174 TGDFSE-KSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       174 ~~~~~~-~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      ...|++ ..||||.|+++..|++|+.||......+...                .......-..............+...
T Consensus       498 ~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~lp~~~  561 (601)
T KOG0590|consen  498 GKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF----------------KTNNYSDQRNIFEGPNRLLSLLPRET  561 (601)
T ss_pred             ccccCcchhhhhhccceEEEEecCCCccccccccccch----------------hhhccccccccccChHHHHHhchhhH
Confidence            999885 5899999999999999999986543211110                00000000000111122344555667


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHHH
Q 039895          253 TELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..++.++|+.+|.+|.|+.+|++
T Consensus       562 ~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  562 RIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             HHHHHHHccCChhheecHHHHhh
Confidence            89999999999999999999985

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.84  E-value=5.1e-21  Score=177.32  Aligned_cols=197  Identities=18%  Similarity=0.165  Sum_probs=136.5

Q ss_pred             CCCCCCeeeecCCceEEEEEeCCcceEEEeecCC------------------------CCCc------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------FPFS------------------   93 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------~~~~------------------   93 (284)
                      ++...+.||++.|=.|.+|++....|+||+|.+.                        .|..                  
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv  103 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV  103 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence            4556678999999999999995555999999766                        1111                  


Q ss_pred             ----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           94 ----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        94 ----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                      .++..|+.|++.||..+|   ..||+|+|||.+||||++=..+.|+||..-+...-........
T Consensus       104 khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf  180 (1431)
T KOG1240|consen  104 KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADF  180 (1431)
T ss_pred             hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccc
Confidence                            567789999999999999   9999999999999999999999999998765542111111111


Q ss_pred             CCc----ccCccccccccccCC----------C-CCcchhHHHHHHHHHHHHhC-CCCCCCCCCCCCccccHHHHHHHHh
Q 039895          158 NRV----IGTFGFMAPEYRTTG----------D-FSEKSDVYSFGALLLELLTG-KKISYSSHFDDGEDYRLQDLVKKYI  221 (284)
Q Consensus       158 ~~~----~gt~~y~aPE~~~~~----------~-~~~~~DvwS~G~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~  221 (284)
                      +.+    ..-..|.|||.+...          + .+++-||||+||++.|+++- ++||.           +.++..-..
T Consensus       181 ~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-----------LSQL~aYr~  249 (1431)
T KOG1240|consen  181 TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-----------LSQLLAYRS  249 (1431)
T ss_pred             eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-----------HHHHHhHhc
Confidence            111    123469999976431          2 56789999999999999985 55553           222221111


Q ss_pred             hcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          222 ENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .+....+.+-..+..             ..+.+++..|++.||++|.++++.++.-..
T Consensus       250 ~~~~~~e~~Le~Ied-------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  250 GNADDPEQLLEKIED-------------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             cCccCHHHHHHhCcC-------------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence            111111111001100             127899999999999999999999887543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.83  E-value=8.1e-20  Score=149.89  Aligned_cols=147  Identities=19%  Similarity=0.310  Sum_probs=124.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      -+|..+++||+|+||.++.|+.  ++.+||||.-...                                           
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG  107 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG  107 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC
Confidence            4789999999999999999998  9999999975433                                           


Q ss_pred             --------CCCc----hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-----cceeeccccccccCCCCc
Q 039895           90 --------FPFS----VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-----VAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --------~~~~----~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-----~~kl~Dfg~a~~~~~~~~  152 (284)
                              +|..    .+.+.+|.|++.-++|+|   ++.+|.|||||+|+||...+     .+.+.|||+|+.+.+..+
T Consensus       108 PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T  184 (449)
T KOG1165|consen  108 PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT  184 (449)
T ss_pred             cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence                    2322    567789999999999999   99999999999999997544     578999999999876544


Q ss_pred             ccc----CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          153 HIN----DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       153 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                      ...    ......||..||+--.-.+...+.+.|+=|+|-++...+-|..||.+..
T Consensus       185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence            322    2234679999999998888889999999999999999999999998654

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=2.3e-19  Score=154.42  Aligned_cols=205  Identities=20%  Similarity=0.190  Sum_probs=144.8

Q ss_pred             CCCCCCeeeecCCceEEEEEeCC---cceEEEeecCC-------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFLQD---RPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~~~---~~vavK~~~~~-------------------------------------------   89 (284)
                      .|...+.||+|+||.||.+....   ..+|+|.....                                           
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            78899999999999999999833   36888876542                                           


Q ss_pred             ---------------CC----CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-----Ccceeecccccc
Q 039895           90 ---------------FP----FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-----NVAQLFDFTLSL  145 (284)
Q Consensus        90 ---------------~~----~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-----~~~kl~Dfg~a~  145 (284)
                                     .+    +..+.++++.|++.+|.+||   +.|++||||||+|+++...     ..+.+.|||+++
T Consensus        99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence                           00    11677889999999999999   9999999999999999865     368999999998


Q ss_pred             --ccCCCCcc--c---cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          146 --SIPEGETH--I---NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       146 --~~~~~~~~--~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                        .+......  .   .......||..|.++.+..+...+.+.|+||++-++.|++.|..|+........     ...+.
T Consensus       176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~~~~~  250 (322)
T KOG1164|consen  176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----KSKFE  250 (322)
T ss_pred             cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----HHHHH
Confidence              33222111  1   111235699999999999999999999999999999999999988854321111     11111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..........     .          ....+..+.++...+-..+...+|....+...|+++...
T Consensus       251 ~~~~~~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  251 KDPRKLLTDR-----F----------GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             HHhhhhcccc-----c----------cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            1111100000     0          011122255566666668999999999999998877653

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=4.1e-20  Score=145.46  Aligned_cols=155  Identities=21%  Similarity=0.262  Sum_probs=124.5

Q ss_pred             cHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------
Q 039895           46 SADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------   89 (284)
Q Consensus        46 ~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------   89 (284)
                      +.+++..+ +.|...++||+|+||.+|.|..  +|..||||+-...                                  
T Consensus         7 s~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y   85 (341)
T KOG1163|consen    7 SLEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY   85 (341)
T ss_pred             chhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence            34444433 5688889999999999999998  9999999997655                                  


Q ss_pred             -----------------CCCc----hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC---Ccceeecccccc
Q 039895           90 -----------------FPFS----VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE---NVAQLFDFTLSL  145 (284)
Q Consensus        90 -----------------~~~~----~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~Dfg~a~  145 (284)
                                       +|..    .+.+-+|-|++.-++|+|   .++.+||||||+|+|..-+   ..+.++|||+|+
T Consensus        86 nvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   86 NVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             ceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchh
Confidence                             3332    566778999999999999   9999999999999999743   357899999999


Q ss_pred             ccCCCCcccc----CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          146 SIPEGETHIN----DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       146 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                      .+.+..+...    ......||..|.+--...+...+.+.|+=|+|-++..+.-|.-||.+..
T Consensus       163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk  225 (341)
T KOG1163|consen  163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK  225 (341)
T ss_pred             hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence            8865433221    2233679999998877767777889999999999999999999997644

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.81  E-value=2.7e-20  Score=172.15  Aligned_cols=190  Identities=22%  Similarity=0.278  Sum_probs=136.7

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------CCCchhHH--HHHHHHHHHHHHhc
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------FPFSVSKL--KIAIEIASAVAYLH  111 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------~~~~~~~~--~i~~~i~~gL~~LH  111 (284)
                      ...+|+..++|..|++|.||...+  ..+.+|.|+-+..                 .|....+.  ..=.+++.+++|||
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~lilRnilt~a~npfvvgDc~tllk~~g~lPvdmvla~Eylh  160 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLILRNILTFAGNPFVVGDCATLLKNIGPLPVDMVLAVEYLH  160 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhcccccchhhhccccccCCcceechhhhhcccCCCCcchhhHHhHhhc
Confidence            457899999999999999999988  5778888543332                 12221111  12234588999999


Q ss_pred             cCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc------------ccCCCCcccCccccccccccCCCCCc
Q 039895          112 VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH------------INDSNRVIGTFGFMAPEYRTTGDFSE  179 (284)
Q Consensus       112 ~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~  179 (284)
                         ..+|+|||+||+|.+|..-|.+|++|||+++........            .-.....+||+.|+|||++.-..|..
T Consensus       161 ---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygk  237 (1205)
T KOG0606|consen  161 ---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGK  237 (1205)
T ss_pred             ---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCC
Confidence               999999999999999999999999999998754221111            01112368999999999999999999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-cccccccccccCCCCCCChhhHHHHHHHHHHHHH
Q 039895          180 KSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFK  258 (284)
Q Consensus       180 ~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (284)
                      .+|-|++|+++||.+.|+.||++..        ..+++...+... .+++- |              ....++..+++..
T Consensus       238 pvdwwamGiIlyeFLVgcvpffGdt--------peelfg~visd~i~wpE~-d--------------ea~p~Ea~dli~~  294 (1205)
T KOG0606|consen  238 PVDWWAMGIILYEFLVGCVPFFGDT--------PEELFGQVISDDIEWPEE-D--------------EALPPEAQDLIEQ  294 (1205)
T ss_pred             CccHHHHHHHHHHHheeeeeccCCC--------HHHHHhhhhhhhcccccc-C--------------cCCCHHHHHHHHH
Confidence            9999999999999999999998653        111111111111 11111 1              2223347889999


Q ss_pred             hhcCCCCCCC
Q 039895          259 CLSESEGDRP  268 (284)
Q Consensus       259 cl~~~p~~Rp  268 (284)
                      .|+.+|..|.
T Consensus       295 LL~qnp~~Rl  304 (1205)
T KOG0606|consen  295 LLRQNPLCRL  304 (1205)
T ss_pred             HHHhChHhhc
Confidence            9999999996

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=1.4e-19  Score=156.08  Aligned_cols=122  Identities=16%  Similarity=0.213  Sum_probs=93.5

Q ss_pred             HHHHhcCCCCCCeeeecCCceEEEEEe---CCcceEEEeecCC-------------------------------------
Q 039895           50 LKTATDDFDGGKVIMKCLFYKLYKGFL---QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        50 l~~~~~~f~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~-------------------------------------   89 (284)
                      .....++|...+.||+|+||+||+|.+   ++..||||+....                                     
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~   92 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGK   92 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCC
Confidence            334557899999999999999999987   4677899985311                                     


Q ss_pred             ------CCCc--------hhHHHHHHHHHHHHHHhccCCCCCeeeccc-ccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 ------FPFS--------VSKLKIAIEIASAVAYLHVGFSRPVVSRDI-KPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ------~~~~--------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDl-kp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                            +|..        .....++.+++.||.|||   +.+|+|||| ||+|||++.++.++|+|||+++.+.......
T Consensus        93 ~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~  169 (365)
T PRK09188         93 DGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALY  169 (365)
T ss_pred             cEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchh
Confidence                  1111        113578999999999999   999999999 9999999999999999999998775432111


Q ss_pred             c-----CCCCcccCccccccccccC
Q 039895          155 N-----DSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus       155 ~-----~~~~~~gt~~y~aPE~~~~  174 (284)
                      .     .-....+++.|+|||++..
T Consensus       170 ~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        170 RIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             hhhhhhhhhhhhccCccCCcccCCh
Confidence            1     1123568888999998753

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.78  E-value=5.1e-20  Score=159.55  Aligned_cols=95  Identities=35%  Similarity=0.564  Sum_probs=80.3

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc---ccCCCCcccCcccccccc
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH---INDSNRVIGTFGFMAPEY  171 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~gt~~y~aPE~  171 (284)
                      ..+.++.|++.|+.|      ++.+|+|+||.||+...+..+||+|||+........+.   ....+...||..||+||.
T Consensus       360 ~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQ  433 (516)
T KOG1033|consen  360 LMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQ  433 (516)
T ss_pred             HHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHH
Confidence            345678888888887      68999999999999999999999999998776554411   112234689999999999


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHh
Q 039895          172 RTTGDFSEKSDVYSFGALLLELLT  195 (284)
Q Consensus       172 ~~~~~~~~~~DvwS~G~il~ellt  195 (284)
                      +.+..|+.++||||||++++|++.
T Consensus       434 i~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  434 IRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             HhhhhhhhhcchhhHHHHHHHHHH
Confidence            999999999999999999999988

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.5e-18  Score=145.75  Aligned_cols=159  Identities=22%  Similarity=0.258  Sum_probs=107.9

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe--cCC--cceeeccccccccCCCCccc---cCCCCcccCccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ--EEN--VAQLFDFTLSLSIPEGETHI---NDSNRVIGTFGF  166 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~--~~kl~Dfg~a~~~~~~~~~~---~~~~~~~gt~~y  166 (284)
                      ....-++.|+++|+.|||   .++|.|||+|++|||+.  .++  .+.|+|||+.---.......   .......|.-.-
T Consensus       341 r~~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~l  417 (598)
T KOG4158|consen  341 RTGRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKL  417 (598)
T ss_pred             HHHHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCccee
Confidence            445568999999999999   99999999999999994  444  45789999864332211110   011113467778


Q ss_pred             cccccccCCC-----C-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCC
Q 039895          167 MAPEYRTTGD-----F-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL  240 (284)
Q Consensus       167 ~aPE~~~~~~-----~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
                      ||||+....+     . -.++|.|+.|.+.||+++...||+.....   ......     ..+..++             
T Consensus       418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem---~L~~r~-----Yqe~qLP-------------  476 (598)
T KOG4158|consen  418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM---LLDTRT-----YQESQLP-------------  476 (598)
T ss_pred             cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh---eechhh-----hhhhhCC-------------
Confidence            9999876543     1 25899999999999999999999863300   000000     1111111             


Q ss_pred             CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHH
Q 039895          241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR  278 (284)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~  278 (284)
                        +.+..+++.+.+++...|+.||++|++..-..+.|+
T Consensus       477 --alp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  477 --ALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             --CCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence              223344555789999999999999999876665554

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.76  E-value=3.3e-17  Score=139.97  Aligned_cols=204  Identities=24%  Similarity=0.288  Sum_probs=140.1

Q ss_pred             CCCCCeeeecCCceEEEEEeCCcceEEEeecCCCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFP---------------------------------------------   91 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~---------------------------------------------   91 (284)
                      |.....||.|+||.||++... ..+++|.+.....                                             
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            444567889999999999887 6678887754400                                             


Q ss_pred             ------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCCCCc
Q 039895           92 ------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        92 ------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~~~  152 (284)
                                        .......++.|++.++.|+|   ..+++|||+||+||+++..+ .++++|||.+........
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~  157 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS  157 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence                              01345678999999999999   99999999999999999988 799999999986654432


Q ss_pred             ccc---CCCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          153 HIN---DSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       153 ~~~---~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ...   ......||..|+|||.+.+   ..++...|+||+|++++++++|..|+......     ...............
T Consensus       158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~  232 (384)
T COG0515         158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-----SATSQTLKIILELPT  232 (384)
T ss_pred             cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-----ccHHHHHHHHHhcCC
Confidence            211   1233689999999999887   57889999999999999999999996433210     001111111111111


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      . .........    .  .......+.+++..|+..+|..|.+..+....
T Consensus       233 ~-~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         233 P-SLASPLSPS----N--PELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             c-ccccccCcc----c--cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            1 000000000    0  01222347789999999999999998876653

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=7.9e-18  Score=158.08  Aligned_cols=141  Identities=19%  Similarity=0.204  Sum_probs=115.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCCCCCc---------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDTFPFS---------------------------------------   93 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~---------------------------------------   93 (284)
                      ...|.+.+.||+|+||.||+|.. +|+.||+|+-+...|++                                       
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~  776 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYS  776 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecc
Confidence            34677788999999999999999 99999999988774444                                       


Q ss_pred             -----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-------CCcceeeccccccccCC
Q 039895           94 -----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-------ENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        94 -----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-------~~~~kl~Dfg~a~~~~~  149 (284)
                                       .-.+.+..|++.-+..||   ..+|||+||||+|+||..       +..++|+|||.+..+.-
T Consensus       777 ~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l  853 (974)
T KOG1166|consen  777 PYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL  853 (974)
T ss_pred             ccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence                             345678999999999999   999999999999999952       34689999998865431


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK  198 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~  198 (284)
                      -... .......+|-.+-++|+..+.++++..|.|.++.+++-|+-|+.
T Consensus       854 fp~~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  854 FPDG-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             cCCC-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            1111 11122567889999999999999999999999999999999965

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.73  E-value=8.1e-18  Score=148.13  Aligned_cols=171  Identities=23%  Similarity=0.292  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCe-eecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPV-VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR  172 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~i-vHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  172 (284)
                      .-...++.+|+.||.|||   ..+| .|+.|++.|.++|..+.+||+|||+.......... .......-...|.|||.+
T Consensus        48 ~F~~s~~rdi~~Gl~ylh---~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~-~~~~~~~~~~lw~aPell  123 (484)
T KOG1023|consen   48 FFILSFIRDISKGLAYLH---NSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEP-EAHHPIRKALLWTAPELL  123 (484)
T ss_pred             HHHHHHHHHHHHHHHHHh---cCcceeeeeeccccceeeeeEEEEechhhhcccccccccc-cccchhHHHHhccCHHHh
Confidence            345678999999999999   5555 99999999999999999999999998766431000 000012234579999998


Q ss_pred             cCCC-------CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhh
Q 039895          173 TTGD-------FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEK  245 (284)
Q Consensus       173 ~~~~-------~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
                      ....       .+.+.||||||++++|+++...||......... ..+...+..     .....+.|.+...       .
T Consensus       124 r~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~-----~~~~~~rP~i~~~-------~  190 (484)
T KOG1023|consen  124 RGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKK-----GGSNPFRPSIELL-------N  190 (484)
T ss_pred             cccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHHh-----cCCCCcCcchhhh-------h
Confidence            7631       467899999999999999999999764422221 122222221     1111222222111       1


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          246 EQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       246 ~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                       +..+.+..++..||..+|+.||++.+|-..++.+..
T Consensus       191 -e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  191 -ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             -hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence             333358899999999999999999999988877654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.69  E-value=9.1e-18  Score=148.39  Aligned_cols=133  Identities=25%  Similarity=0.266  Sum_probs=104.5

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD  176 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (284)
                      ..+...++.+++++|   +.+|+|||+|++||+++.+|.+++.|||+++..-....       .+||..|||||++.  .
T Consensus       100 ~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-------~cgt~eymApEI~~--g  167 (612)
T KOG0603|consen  100 AFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-------ACGTYEYRAPEIIN--G  167 (612)
T ss_pred             HHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-------cccchhhhhhHhhh--c
Confidence            346778899999999   99999999999999999999999999999987644332       27899999999988  5


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHH
Q 039895          177 FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELA  256 (284)
Q Consensus       177 ~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (284)
                      ....+|-||||++.+|++||..||...            ........                 ..+.+.+......+++
T Consensus       168 h~~a~D~ws~gvl~felltg~~pf~~~------------~~~~Il~~-----------------~~~~p~~l~~~a~~~~  218 (612)
T KOG0603|consen  168 HLSAADWWSFGVLAFELLTGTLPFGGD------------TMKRILKA-----------------ELEMPRELSAEARSLF  218 (612)
T ss_pred             cCCcccchhhhhhHHHHhhCCCCCchH------------HHHHHhhh-----------------ccCCchhhhHHHHHHH
Confidence            678999999999999999999998641            11111100                 0122445555677888


Q ss_pred             HHhhcCCCCCCCCH
Q 039895          257 FKCLSESEGDRPTI  270 (284)
Q Consensus       257 ~~cl~~~p~~Rps~  270 (284)
                      ..++..+|.+|.-.
T Consensus       219 ~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  219 RQLFKRNPENRLGA  232 (612)
T ss_pred             HHHHhhCHHHHhcc
Confidence            89999999998755

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.68  E-value=8.3e-17  Score=127.77  Aligned_cols=84  Identities=8%  Similarity=0.131  Sum_probs=70.2

Q ss_pred             CCeeeecCCceEEEEEe-CCcceEEEeecCCC------------------------------------------------
Q 039895           60 GKVIMKCLFYKLYKGFL-QDRPISVMKFEDTF------------------------------------------------   90 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------------------------------------------------   90 (284)
                      ...||+|+||.||+|.. +|++||||++....                                                
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            35899999999999998 89999999984220                                                


Q ss_pred             -----------------CCc---------------hhHHHHHHHHHHHHHHh-ccCCCCCeeecccccCcEEEecCCcce
Q 039895           91 -----------------PFS---------------VSKLKIAIEIASAVAYL-HVGFSRPVVSRDIKPTTIVLQEENVAQ  137 (284)
Q Consensus        91 -----------------~~~---------------~~~~~i~~~i~~gL~~L-H~~~~~~ivHrDlkp~NILl~~~~~~k  137 (284)
                                       |..               .....++.|++.+|.++ |   +.+|+||||||+|||++ ++.++
T Consensus        82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~~v~  157 (190)
T cd05147          82 PCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DGKLY  157 (190)
T ss_pred             CCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CCcEE
Confidence                             100               24567899999999999 7   88999999999999998 57899


Q ss_pred             eecccccccc
Q 039895          138 LFDFTLSLSI  147 (284)
Q Consensus       138 l~Dfg~a~~~  147 (284)
                      |+|||+|...
T Consensus       158 LiDFG~a~~~  167 (190)
T cd05147         158 IIDVSQSVEH  167 (190)
T ss_pred             EEEccccccC
Confidence            9999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.67  E-value=2.3e-16  Score=125.50  Aligned_cols=86  Identities=9%  Similarity=0.121  Sum_probs=73.2

Q ss_pred             CCeeeecCCceEEEEEe-CCcceEEEeecCCC------------------------------------------------
Q 039895           60 GKVIMKCLFYKLYKGFL-QDRPISVMKFEDTF------------------------------------------------   90 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------------------------------------------------   90 (284)
                      ...||+|++|.||+|.. +|+.||||++....                                                
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46899999999999998 79999999976421                                                


Q ss_pred             -----------------CCc---------------hhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcce
Q 039895           91 -----------------PFS---------------VSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQ  137 (284)
Q Consensus        91 -----------------~~~---------------~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~k  137 (284)
                                       |..               .....++.|++.+|.++|   . .+|+||||||+|||++ ++.++
T Consensus        82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~~~~~  157 (190)
T cd05145          82 PVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-DGKPY  157 (190)
T ss_pred             CCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-CCCEE
Confidence                             000               355789999999999999   7 9999999999999999 88999


Q ss_pred             eeccccccccCC
Q 039895          138 LFDFTLSLSIPE  149 (284)
Q Consensus       138 l~Dfg~a~~~~~  149 (284)
                      |+|||++.....
T Consensus       158 liDFG~a~~~~~  169 (190)
T cd05145         158 IIDVSQAVELDH  169 (190)
T ss_pred             EEEcccceecCC
Confidence            999999976643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.65  E-value=5.6e-17  Score=130.71  Aligned_cols=122  Identities=13%  Similarity=0.124  Sum_probs=92.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCCC-------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTF-------------------------------------------   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-------------------------------------------   90 (284)
                      .+.|...+++|.|+||.||....++..+|+|++....                                           
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~  109 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER  109 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence            4778889999999999999987788899999996430                                           


Q ss_pred             -----CCc----------hhH-------HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           91 -----PFS----------VSK-------LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        91 -----~~~----------~~~-------~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                           +..          .+.       .....+++.+|..+|   ..|++|+|++|+||+++.+| ++|+|||......
T Consensus       110 ~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~  185 (232)
T PRK10359        110 KTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTA  185 (232)
T ss_pred             ccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCccccc
Confidence                 000          111       235679999999999   99999999999999999988 9999999876553


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHH
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL  194 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ell  194 (284)
                      .....               ..+.....++.++|+||||+++.-+.
T Consensus       186 e~~a~---------------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        186 QRKAK---------------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             chhhH---------------HHHHHHhHhcccccccceeEeehHHH
Confidence            21111               11333445677999999999877553

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=2.7e-15  Score=118.74  Aligned_cols=145  Identities=13%  Similarity=0.099  Sum_probs=103.1

Q ss_pred             CCCCCeeeecCCceEEEEEeCCcceEEEeecCCCC------------------------------------------Cc-
Q 039895           57 FDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFP------------------------------------------FS-   93 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~------------------------------------------~~-   93 (284)
                      +.....|++|+||+||.+...+.+++.+.+.....                                          .. 
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~   83 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGA   83 (218)
T ss_pred             cccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCc
Confidence            34567899999999998877888887666544300                                          00 


Q ss_pred             -------hhHHHHHHHHHHHHHHhccCCCCCeeeccc-ccCcEEEecCCcceeeccccccccCCCCcc----c-cC----
Q 039895           94 -------VSKLKIAIEIASAVAYLHVGFSRPVVSRDI-KPTTIVLQEENVAQLFDFTLSLSIPEGETH----I-ND----  156 (284)
Q Consensus        94 -------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDl-kp~NILl~~~~~~kl~Dfg~a~~~~~~~~~----~-~~----  156 (284)
                             .....++.|++.+|.++|   ..||+|||| ||+|||++.++.++|+|||++.........    . .+    
T Consensus        84 ~L~~~~~~~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~l  160 (218)
T PRK12274         84 AMYQRPPRGDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHL  160 (218)
T ss_pred             cHHhhhhhhhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHH
Confidence                   123467889999999999   999999999 799999999999999999999865432210    0 00    


Q ss_pred             -CCCcccCccccccccccCC-CCC-cchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          157 -SNRVIGTFGFMAPEYRTTG-DFS-EKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       157 -~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                       ......++.|++|+--.-. ..+ ...+-++-|.-+|.++|+..+..+..
T Consensus       161 lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        161 LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence             0001246777777643221 233 45677799999999999998876543

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.54  E-value=3e-14  Score=114.18  Aligned_cols=90  Identities=11%  Similarity=0.096  Sum_probs=74.5

Q ss_pred             CCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------------   89 (284)
                      -|...+.||+|+||.||++.. +|+.||||++...                                             
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            366778999999999999998 8999999974321                                             


Q ss_pred             ----------------CCCc---------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           90 ----------------FPFS---------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        90 ----------------~~~~---------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                                      ++..         .....++.+++.++.++|   ..+|+|+||+|+||+++.++.++|+|||.+
T Consensus        96 ~v~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~  172 (198)
T cd05144          96 PVPKPIDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQM  172 (198)
T ss_pred             CCCceeecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCcc
Confidence                            0000         223468899999999999   899999999999999999999999999998


Q ss_pred             cccC
Q 039895          145 LSIP  148 (284)
Q Consensus       145 ~~~~  148 (284)
                      ....
T Consensus       173 ~~~~  176 (198)
T cd05144         173 VSTD  176 (198)
T ss_pred             ccCC
Confidence            6554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>smart00090 RIO RIO-like kinase

Probab=99.52  E-value=2.6e-14  Score=117.32  Aligned_cols=88  Identities=13%  Similarity=0.141  Sum_probs=73.6

Q ss_pred             CCCCCCeeeecCCceEEEEE-e--CCcceEEEeecCCC------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGF-L--QDRPISVMKFEDTF------------------------------------------   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~-~--~~~~vavK~~~~~~------------------------------------------   90 (284)
                      .|+..+.||+|++|.||+|. .  +|..||+|++....                                          
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47778899999999999998 3  89999999875210                                          


Q ss_pred             ---------------------CCc---------------hhHHHHHHHHHHHHHHhccCCCCC-eeecccccCcEEEecC
Q 039895           91 ---------------------PFS---------------VSKLKIAIEIASAVAYLHVGFSRP-VVSRDIKPTTIVLQEE  133 (284)
Q Consensus        91 ---------------------~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~-ivHrDlkp~NILl~~~  133 (284)
                                           +..               .....++.|++.+|.+||   ..+ |+|+||||+||+++ +
T Consensus       109 ~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~  184 (237)
T smart00090      109 EAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNILVH-D  184 (237)
T ss_pred             hcCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhEEEE-C
Confidence                                 000               234579999999999999   999 99999999999999 8


Q ss_pred             Ccceeecccccccc
Q 039895          134 NVAQLFDFTLSLSI  147 (284)
Q Consensus       134 ~~~kl~Dfg~a~~~  147 (284)
                      +.++|+|||.+...
T Consensus       185 ~~i~LiDFg~a~~~  198 (237)
T smart00090      185 GKVVIIDVSQSVEL  198 (237)
T ss_pred             CCEEEEEChhhhcc
Confidence            89999999988654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.50  E-value=5.4e-14  Score=111.55  Aligned_cols=85  Identities=14%  Similarity=0.146  Sum_probs=71.2

Q ss_pred             CCeeeecCCceEEEEEe-CCcceEEEeecCCCC-----------------------------------------------
Q 039895           60 GKVIMKCLFYKLYKGFL-QDRPISVMKFEDTFP-----------------------------------------------   91 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-----------------------------------------------   91 (284)
                      .+.||+|+||+||+|.. +|+.||||++.....                                               
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999 699999998764200                                               


Q ss_pred             ----------------Cc--------------hhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeec
Q 039895           92 ----------------FS--------------VSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        92 ----------------~~--------------~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                                      ..              .....++.+++.++.++|   . .+|+|+||||+||+++ ++.++++|
T Consensus        82 ~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liD  157 (187)
T cd05119          82 PKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-DGKVYIID  157 (187)
T ss_pred             CceEecCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEE
Confidence                            00              234578999999999999   7 9999999999999999 89999999


Q ss_pred             cccccccC
Q 039895          141 FTLSLSIP  148 (284)
Q Consensus       141 fg~a~~~~  148 (284)
                      ||.+....
T Consensus       158 fg~a~~~~  165 (187)
T cd05119         158 VPQAVEID  165 (187)
T ss_pred             Cccccccc
Confidence            99986553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.48  E-value=3.9e-13  Score=108.68  Aligned_cols=82  Identities=21%  Similarity=0.255  Sum_probs=68.9

Q ss_pred             CeeeecCCceEEEEEeCCcceEEEeecCC-------------------------------------------------CC
Q 039895           61 KVIMKCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------------------FP   91 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------------------~~   91 (284)
                      +.||+|++|.||+|.+.|..|++|+....                                                 ++
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            57999999999999999999999975432                                                 00


Q ss_pred             Cc-----------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           92 FS-----------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        92 ~~-----------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ..           ..+..++.+++.+|.++|   ..+++|+|++|.|||++ ++.++|+|||.+..
T Consensus        82 ~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         82 EGEPLKDLINSNGMEELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCcCHHHHHHhccHHHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            00           124588999999999999   99999999999999999 78899999998754

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.45  E-value=1.9e-13  Score=109.53  Aligned_cols=82  Identities=20%  Similarity=0.203  Sum_probs=67.7

Q ss_pred             eeeecCCceEEEEEeCCcceEEEeecCC-------------------------------------------------CCC
Q 039895           62 VIMKCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------------------FPF   92 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------------------~~~   92 (284)
                      +||+|+||.||+|.++|..|++|.....                                                 ++.
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            4899999999999999999999985421                                                 000


Q ss_pred             c---hhH-----HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           93 S---VSK-----LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        93 ~---~~~-----~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                      .   ...     ..++.+++.+|.+||   ..+++|+|++|.||+++ ++.+++.|||++...
T Consensus        81 g~~l~~~~~~~~~~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        81 GKPLKDVIEEGNDELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CccHHHHHhhcHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            0   011     178999999999999   99999999999999999 889999999988653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.41  E-value=2.9e-13  Score=124.23  Aligned_cols=91  Identities=16%  Similarity=0.150  Sum_probs=71.2

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC-------------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ....|...+.||+|+||+||+|.+.+..+++|+....                                           
T Consensus       331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        331 VKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             cccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            3445567889999999999999997666666543211                                           


Q ss_pred             ------CCCc-------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 ------FPFS-------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 ------~~~~-------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                            ++..       .....++.+++.+|.+||   +.+++||||||+|||+ .++.++|+|||+++..
T Consensus       411 ~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence                  0000       224678999999999999   9999999999999999 5788999999998553

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.28  E-value=2.3e-10  Score=97.94  Aligned_cols=182  Identities=19%  Similarity=0.173  Sum_probs=119.5

Q ss_pred             CCCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccccc
Q 039895           90 FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAP  169 (284)
Q Consensus        90 ~~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  169 (284)
                      .|.....++.+..++.+.+-||   ..|.+-+|+.++|+|+++++.+.|.|-..-.....+....    ..+|...|.+|
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~----cpVg~~eftPP  185 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHL----CPVGVSEFTPP  185 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeeccCCceEe----cccCccccCCH
Confidence            3444778899999999999999   8999999999999999999999998854332222222222    26789999999


Q ss_pred             cccc-----CCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC-CCC
Q 039895          170 EYRT-----TGDFSEKSDVYSFGALLLELLTG-KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG-LMW  242 (284)
Q Consensus       170 E~~~-----~~~~~~~~DvwS~G~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  242 (284)
                      |...     +-.-+...|.|.+|+++++++.| ++||.+..........+..-+..    +.+....+........ ..+
T Consensus       186 ElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~----g~f~ya~~~~~g~~p~P~~~  261 (637)
T COG4248         186 ELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH----GRFAYASDQRRGLKPPPRSI  261 (637)
T ss_pred             HHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc----ceeeechhccCCCCCCCCCC
Confidence            9754     22346789999999999999887 88886644322222222211211    1111111111111111 111


Q ss_pred             hhhHHHHHHHHHHHHHhhcC--CCCCCCCHHHHHHHHHHHHhc
Q 039895          243 PEKEQQLLICTELAFKCLSE--SEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       243 ~~~~~~~~~~~~l~~~cl~~--~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      | ..-.++.+..|..+|+..  ++.-|||++..+..|..+.++
T Consensus       262 P-~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~  303 (637)
T COG4248         262 P-LSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ  303 (637)
T ss_pred             C-hhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence            1 223344577888899865  367899999999999887654

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.25  E-value=1.2e-11  Score=101.64  Aligned_cols=84  Identities=13%  Similarity=0.016  Sum_probs=68.1

Q ss_pred             CCeee-ecCCceEEEEEeCCcceEEEeecCC-------------------------------------------------
Q 039895           60 GKVIM-KCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------------------   89 (284)
Q Consensus        60 ~~~lg-~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------------------   89 (284)
                      ...|| .||.|+||.....+..++||.+...                                                 
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            46898 8999999999998889999877421                                                 


Q ss_pred             -----------CCCc-hh----------HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 -----------FPFS-VS----------KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 -----------~~~~-~~----------~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                                 ++.. ..          ....+.+++.+|.+||   +.||+|+||||.|||++.++.++|+|||.+..
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence                       0000 00          1234778999999999   99999999999999999989999999998755

>PRK10345 hypothetical protein; Provisional

Probab=99.25  E-value=2e-11  Score=98.06  Aligned_cols=44  Identities=18%  Similarity=0.255  Sum_probs=36.5

Q ss_pred             HHHHHHHHHH-HHhccCCCCCeeecccccCcEEEecC----Ccceeeccccc
Q 039895           98 KIAIEIASAV-AYLHVGFSRPVVSRDIKPTTIVLQEE----NVAQLFDFTLS  144 (284)
Q Consensus        98 ~i~~~i~~gL-~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~Dfg~a  144 (284)
                      .++.+++.++ +|||   +.+|+||||||+|||++..    +.++|+||+.+
T Consensus       108 ~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        108 AQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            3577888888 9999   9999999999999999743    37999995433

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.25  E-value=1e-12  Score=120.86  Aligned_cols=157  Identities=24%  Similarity=0.303  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCC--CCccccCCCCccc-Ccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPE--GETHINDSNRVIG-TFGFMAP  169 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~--~~~~~~~~~~~~g-t~~y~aP  169 (284)
                      ...-.++.|+..++.|+|.  ..++.|+|+||+|.+++..+ ..+++|||+|..+..  +......  ...| ++.|+||
T Consensus       123 ~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~--~~~g~s~~y~a~  198 (601)
T KOG0590|consen  123 SSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLK--DRCGSSPPYGAP  198 (601)
T ss_pred             cchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeee--cccCCCCCCCCc
Confidence            4456789999999999995  67899999999999999999 999999999988765  2222222  2567 9999999


Q ss_pred             ccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHH
Q 039895          170 EYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQ  248 (284)
Q Consensus       170 E~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (284)
                      |...+. ......|+||.|+++.-+++|..|+.........   ...|....   ..+...              .....
T Consensus       199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~---~~~~~~~~---~~~~~~--------------~~~~~  258 (601)
T KOG0590|consen  199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR---YSSWKSNK---GRFTQL--------------PWNSI  258 (601)
T ss_pred             ccccchhhcCCCcccccccccccccccCCCCcccccccccc---ceeecccc---cccccC--------------ccccC
Confidence            998874 4467899999999999999999998654321111   11111100   000000              00111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          249 LLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       249 ~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                      .....++..+++..+|+.|.+.+++.
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             ChhhhhcccccccCCchhcccccccc
Confidence            11255788888889999999988764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.25  E-value=2.7e-11  Score=108.09  Aligned_cols=50  Identities=16%  Similarity=0.237  Sum_probs=42.5

Q ss_pred             HHHHHHHHH-HHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           97 LKIAIEIAS-AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        97 ~~i~~~i~~-gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                      ..++..++. .+..+|   ..|++|+|++|.||+++.++.+++.|||++..+..
T Consensus       259 ~~ia~~~~~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       259 KALAENLARSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHHHHHHHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            456666666 467889   89999999999999999999999999999877653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.20  E-value=4.6e-11  Score=90.71  Aligned_cols=87  Identities=17%  Similarity=0.115  Sum_probs=71.6

Q ss_pred             CCeeeecCCceEEEEEeCCcceEEEeecCCCC-----------------------------------------Cc-----
Q 039895           60 GKVIMKCLFYKLYKGFLQDRPISVMKFEDTFP-----------------------------------------FS-----   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-----------------------------------------~~-----   93 (284)
                      .+.||+|.++.||++..++..+++|......-                                         ..     
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~   82 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDE   82 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeeccc
Confidence            46799999999999999778999999865410                                         00     


Q ss_pred             ---hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           94 ---VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        94 ---~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                         .....++.+++.+|.++|.....+++|+|++|+||+++..+.+++.|||.+..
T Consensus        83 ~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          83 VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence               24567899999999999944335799999999999999989999999998754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.13  E-value=8.9e-11  Score=104.22  Aligned_cols=192  Identities=20%  Similarity=0.187  Sum_probs=131.3

Q ss_pred             CCCCCCeeee--cCCceEEEEEe----CCcceEEEeecCC----------------------------------------
Q 039895           56 DFDGGKVIMK--CLFYKLYKGFL----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~--G~~g~Vy~~~~----~~~~vavK~~~~~----------------------------------------   89 (284)
                      .|.....+|.  |.+|.||.+..    ++..+|+|.-+..                                        
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            3555678999  99999999887    6788999874322                                        


Q ss_pred             ------------CCCc-------hhHHHHHHHHHH----HHHHhccCCCCCeeecccccCcEEEecC-Ccceeecccccc
Q 039895           90 ------------FPFS-------VSKLKIAIEIAS----AVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSL  145 (284)
Q Consensus        90 ------------~~~~-------~~~~~i~~~i~~----gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~  145 (284)
                                  +|..       ........+...    ||..+|   ..+++|-|+||.||++..+ ..++++|||+..
T Consensus       195 iqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  195 IQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVS  271 (524)
T ss_pred             eeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCcceeE
Confidence                        1111       334456667777    999999   9999999999999999999 889999999998


Q ss_pred             ccCCCCccccCC--CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc
Q 039895          146 SIPEGETHINDS--NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN  223 (284)
Q Consensus       146 ~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (284)
                      .+.+........  ....|...|++||+.. +.++...|+||+|.++.+..++..++....+                  
T Consensus       272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------------------  332 (524)
T KOG0601|consen  272 KISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN------------------  332 (524)
T ss_pred             EccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC------------------
Confidence            887655322211  1235677899999765 4678899999999999999998776543210                  


Q ss_pred             CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..|.. ++......+     ........+...+..+++.+|-.|++++.+.+
T Consensus       333 ~~W~~-~r~~~ip~e-----~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  333 SSWSQ-LRQGYIPLE-----FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             CCccc-cccccCchh-----hhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            00000 000000000     00011112344778899999999999877653

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.10  E-value=1.1e-10  Score=96.77  Aligned_cols=104  Identities=25%  Similarity=0.332  Sum_probs=75.2

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc-cCCCCcccCccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI-NDSNRVIGTFGFMAPEYR  172 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~  172 (284)
                      ..-.+++.||+.||.|||.. +.+|+|+++..+-|++..+|.+||+--.-...-.+-.... .......+-++|.+||.-
T Consensus       176 ~~wkkw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg  254 (458)
T KOG1266|consen  176 KAWKKWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESG  254 (458)
T ss_pred             HHHHHHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcC
Confidence            34457999999999999954 8999999999999999999988876422111111100000 011113467889999987


Q ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCC
Q 039895          173 TTGDFSEKSDVYSFGALLLELLTGKK  198 (284)
Q Consensus       173 ~~~~~~~~~DvwS~G~il~elltg~~  198 (284)
                      .....+.++|||+||+..+||..+..
T Consensus       255 ~~tn~~~a~dIy~fgmcAlemailEi  280 (458)
T KOG1266|consen  255 TTTNTTGASDIYKFGMCALEMAILEI  280 (458)
T ss_pred             cccccccchhhhhhhHHHHHHHHhee
Confidence            76677889999999999999987754

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.08  E-value=2.3e-11  Score=109.57  Aligned_cols=152  Identities=22%  Similarity=0.239  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc------CCCCcccCcccccccccc
Q 039895          100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN------DSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus       100 ~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~  173 (284)
                      +.+++.||.|+|.  +.++||++|.|++|.++.++..||+.|+.............      -.....-...|.|||++.
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            4566789999997  78999999999999999999999999998765543211100      001122346799999999


Q ss_pred             CCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHH
Q 039895          174 TGDFSEKSDVYSFGALLLELL-TGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLIC  252 (284)
Q Consensus       174 ~~~~~~~~DvwS~G~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
                      ....+.++|+||+|+++|.+. .|+..+.......     ..... ....        +....+       .....+.++
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-----~~~~~-~~~~--------~~~~~~-------~s~~~p~el  241 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-----SYSFS-RNLL--------NAGAFG-------YSNNLPSEL  241 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcc-----hhhhh-hccc--------cccccc-------ccccCcHHH
Confidence            888889999999999999998 4554443322100     00000 0000        000000       012334447


Q ss_pred             HHHHHHhhcCCCCCCCCHHHHH
Q 039895          253 TELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       253 ~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                      .+-+.+.+..++..||++.++.
T Consensus       242 ~~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  242 RESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             HHHHHHHhcCCcccCcchhhhh
Confidence            7888899999999999877654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.05  E-value=1.5e-10  Score=102.77  Aligned_cols=202  Identities=19%  Similarity=0.183  Sum_probs=137.0

Q ss_pred             ceecHHH-HHHHhcCCCCCCeeeecCCceEEEEEe---CCcceEEEeecCC-----------------------------
Q 039895           43 RSFSADE-LKTATDDFDGGKVIMKCLFYKLYKGFL---QDRPISVMKFEDT-----------------------------   89 (284)
Q Consensus        43 ~~~~~~~-l~~~~~~f~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~-----------------------------   89 (284)
                      ..|...+ ....+.+|.....||.|.|+.|++...   ++..+++|.+...                             
T Consensus       252 ~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~  331 (524)
T KOG0601|consen  252 NIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGK  331 (524)
T ss_pred             heecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCC
Confidence            3344444 333456788888999999999999877   6778898887665                             


Q ss_pred             ---------------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-Cccee
Q 039895           90 ---------------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQL  138 (284)
Q Consensus        90 ---------------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl  138 (284)
                                     +|..               ..++++..|++.++.++|   ++.++|+|++|+||++..+ +..++
T Consensus       332 ~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~  408 (524)
T KOG0601|consen  332 NSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKL  408 (524)
T ss_pred             CCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhc
Confidence                           2211               456788999999999999   9999999999999999986 78899


Q ss_pred             eccccccccCCCCccccCCCCcccCccc-cccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGF-MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||++..+.-.....     ...+..| .+|.......+..+.|++|||..+.+.+++........             
T Consensus       409 ~~~~~~t~~~~~~~~~-----~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------------  470 (524)
T KOG0601|consen  409 GDFGCWTRLAFSSGVF-----HHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-------------  470 (524)
T ss_pred             cccccccccceecccc-----cccccccccchhhccccccccccccccccccccccccCcccCcccc-------------
Confidence            9999986532211110     1123333 35555556678899999999999999999865432211             


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                             .+..+..-.+        +........+..+...+...++..||.+.++....+-.
T Consensus       471 -------~~~~i~~~~~--------p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  471 -------QSLTIRSGDT--------PNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             -------cceeeecccc--------cCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence                   0001100000        01111113356778888999999999998877655443

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.02  E-value=8.3e-10  Score=100.05  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=31.9

Q ss_pred             CCCeeecccccCcEEEecCC----cceeeccccccccCC
Q 039895          115 SRPVVSRDIKPTTIVLQEEN----VAQLFDFTLSLSIPE  149 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~----~~kl~Dfg~a~~~~~  149 (284)
                      ..|++|+|++|.||+++.++    .+++.|||++..+..
T Consensus       278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            78999999999999999888    899999999877754

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.96  E-value=3.4e-09  Score=83.84  Aligned_cols=48  Identities=13%  Similarity=0.171  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHHHh-ccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           97 LKIAIEIASAVAYL-HVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        97 ~~i~~~i~~gL~~L-H~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                      ..+..+++.+|..| |   ..+|||+||++.|||++ ++.+.|+|||.+....
T Consensus       127 ~~i~~~i~~~l~~l~H---~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         127 KNAYYQVLSMMKQLYK---ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             HHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            45678999999998 8   89999999999999997 5679999999876553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.91  E-value=3.7e-09  Score=82.25  Aligned_cols=81  Identities=19%  Similarity=0.190  Sum_probs=64.8

Q ss_pred             CeeeecCCceEEEEEeCCcceEEEeecCCCCC--c--------------------------------------------h
Q 039895           61 KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPF--S--------------------------------------------V   94 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~--~--------------------------------------------~   94 (284)
                      +.|+.|.++.||++...+..+++|+.......  .                                            .
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~   83 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTEDF   83 (170)
T ss_pred             eecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccccc
Confidence            46889999999999998889999997543100  0                                            1


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCC-----eeecccccCcEEEecCCcceeecccccc
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRP-----VVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~-----ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                      ....++.+++.+|+.||   ..+     ++|+|++|.||+++ ++.+++.|||.+.
T Consensus        84 ~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          84 SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            12356789999999999   666     59999999999999 6789999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.89  E-value=2.3e-09  Score=100.80  Aligned_cols=148  Identities=25%  Similarity=0.337  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC------C--C-----------------c
Q 039895           98 KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE------G--E-----------------T  152 (284)
Q Consensus        98 ~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~------~--~-----------------~  152 (284)
                      .....+..+++|||   ...+.|+|++|.|+|+..++..+++|||.......      .  .                 .
T Consensus       908 s~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l  984 (1205)
T KOG0606|consen  908 SPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQL  984 (1205)
T ss_pred             chhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccccc
Confidence            35667888999999   88899999999999999999999999984322210      0  0                 0


Q ss_pred             cc---cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          153 HI---NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       153 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ..   .......||+.|.+||...+......+|.|++|++++|.++|.+||....        .+..         +..+
T Consensus       985 ~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t--------pq~~---------f~ni 1047 (1205)
T KOG0606|consen  985 SADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET--------PQQI---------FENI 1047 (1205)
T ss_pred             ccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc--------hhhh---------hhcc
Confidence            00   01123578999999999999999999999999999999999999986543        0111         1111


Q ss_pred             ccccccCCCCCCChh-hHHHHHHHHHHHHHhhcCCCCCCCCHH
Q 039895          230 VDPAIVGEEGLMWPE-KEQQLLICTELAFKCLSESEGDRPTIV  271 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~  271 (284)
                      ....+      .|+. .........+++...+..+|.+|..+.
T Consensus      1048 ~~~~~------~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1048 LNRDI------PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             ccCCC------CCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            11111      1111 223344467888889999999998765

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.66  E-value=1.3e-07  Score=72.82  Aligned_cols=85  Identities=18%  Similarity=0.227  Sum_probs=67.8

Q ss_pred             CCCeeeecCCceEEEEEeCCcceEEEeecCC-------------------------------------CCC---------
Q 039895           59 GGKVIMKCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------FPF---------   92 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------~~~---------   92 (284)
                      ...+|-+|+-+.|+++.+.|+...||.=...                                     +|.         
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            5678999999999999999999888854332                                     000         


Q ss_pred             --------------------c-hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc---ceeeccccccc
Q 039895           93 --------------------S-VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSLS  146 (284)
Q Consensus        93 --------------------~-~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~Dfg~a~~  146 (284)
                                          + .....++..|-+.+.-||   ..+|+|+||..+||++..++.   +.+.|||++..
T Consensus        91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence                                0 223578899999999999   999999999999999987663   47999999743

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.58  E-value=2.2e-07  Score=71.73  Aligned_cols=82  Identities=20%  Similarity=0.232  Sum_probs=64.2

Q ss_pred             CeeeecCCceEEEEEeCCcceEEEeecCC------------------------------CCCc-----------------
Q 039895           61 KVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------------FPFS-----------------   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------------~~~~-----------------   93 (284)
                      ..+++|+-+.+|.+.+-|.++.+|.=.+.                              .|..                 
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            36889999999999998877777764433                              0000                 


Q ss_pred             ----------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           94 ----------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        94 ----------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                                .....++..+-.-+.-||   ..+|+|+||.++||++...+ +.+.|||++..
T Consensus        82 ~G~~lkd~l~~~~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          82 EGELLKDALEEARPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             CChhHHHHHHhcchHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence                      112457788888899999   99999999999999998665 89999999854

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.43  E-value=1.5e-06  Score=68.56  Aligned_cols=49  Identities=18%  Similarity=0.308  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHH-hccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           96 KLKIAIEIASAVAY-LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        96 ~~~i~~~i~~gL~~-LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                      ...++.+++..+.. +|   ..||+|+||.+.|||++.+ .+.|.|||.+....
T Consensus       108 ~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  108 PKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             HHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            45678888885555 57   8999999999999999977 89999999875543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.36  E-value=1e-06  Score=79.73  Aligned_cols=49  Identities=18%  Similarity=0.261  Sum_probs=38.4

Q ss_pred             HHHHHHHHH-HHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           98 KIAIEIASA-VAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        98 ~i~~~i~~g-L~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                      .++..++.+ +..+-   ..|++|.|..|.||+++.+|.+-+.|||+...+.+
T Consensus       268 ~ia~~~~~~f~~q~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         268 ELAELLVRAFLRQLL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHHHHHHHHHHHHH---hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            455555443 34444   67999999999999999999999999999877653

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.31  E-value=1.1e-05  Score=73.51  Aligned_cols=92  Identities=17%  Similarity=0.211  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCC
Q 039895           98 KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDF  177 (284)
Q Consensus        98 ~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  177 (284)
                      .-+.||+.||.|||+  +.+++|++|.-+.|+++..|.-||++|.++........   ......---.|..|+.+.... 
T Consensus       108 ~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---~~~~~~~~~s~~~P~~~~~s~-  181 (690)
T KOG1243|consen  108 LGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---PAKSLYLIESFDDPEEIDPSE-  181 (690)
T ss_pred             HHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---ccccchhhhcccChhhcCccc-
Confidence            458899999999986  78999999999999999999999999988754432211   000011222355665433222 


Q ss_pred             CcchhHHHHHHHHHHHHhC
Q 039895          178 SEKSDVYSFGALLLELLTG  196 (284)
Q Consensus       178 ~~~~DvwS~G~il~elltg  196 (284)
                       -..|.|-|||+++|++.|
T Consensus       182 -~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  182 -WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             -cchhhhhHHHHHHHHhCc
Confidence             456999999999999999

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.22  E-value=5.5e-06  Score=67.90  Aligned_cols=85  Identities=16%  Similarity=0.089  Sum_probs=66.1

Q ss_pred             CCCCeeeecCCceEEEEEe-CCcceEEEeecCCCC----------------------------------------C----
Q 039895           58 DGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDTFP----------------------------------------F----   92 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~----------------------------------------~----   92 (284)
                      ..++.||-|.-|.||.|.. .|.++|||.=..+..                                        .    
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            4468999999999999999 799999998654400                                        0    


Q ss_pred             ---------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           93 ---------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        93 ---------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                                                 ....-.++..|+.-+.-+-   ..||||+|+++=||+++++|.+.+.||--+.
T Consensus       174 P~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v  250 (304)
T COG0478         174 PKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGDIVVIDWPQAV  250 (304)
T ss_pred             CCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCCCEEEEeCcccc
Confidence                                       0223345666666666666   6899999999999999999999999987553

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.20  E-value=5.1e-06  Score=67.31  Aligned_cols=102  Identities=11%  Similarity=0.075  Sum_probs=76.9

Q ss_pred             eecHHHHHHHhcCCCCCCe---eeecCCceEEEEEe-CCcceEEEeecCCCCCc--------------------------
Q 039895           44 SFSADELKTATDDFDGGKV---IMKCLFYKLYKGFL-QDRPISVMKFEDTFPFS--------------------------   93 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~~~~---lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~--------------------------   93 (284)
                      ..+.+.|....+.-.....   |++|.-+.||+|.. ++..+|||++....+..                          
T Consensus        34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~  113 (268)
T COG1718          34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA  113 (268)
T ss_pred             hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence            3456666666555554444   55677778999998 89999999997661110                          


Q ss_pred             ----------------------------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeec
Q 039895           94 ----------------------------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSR  121 (284)
Q Consensus        94 ----------------------------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHr  121 (284)
                                                                          .....+..++++++.-|-.  ..++||+
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~--~a~LVHg  191 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYK--EAGLVHG  191 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHH--hcCcccc
Confidence                                                                2355677888888888872  4899999


Q ss_pred             ccccCcEEEecCCcceeeccccccccC
Q 039895          122 DIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus       122 Dlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                      ||+.=|||+. ++.+.|+|||-|....
T Consensus       192 DLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         192 DLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             cchhhheEEE-CCeEEEEECccccccC
Confidence            9999999999 8899999999886654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.94  E-value=9.3e-06  Score=67.83  Aligned_cols=50  Identities=16%  Similarity=0.137  Sum_probs=43.5

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-------CCcceeeccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-------ENVAQLFDFTLSLS  146 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-------~~~~kl~Dfg~a~~  146 (284)
                      ..+..++.+++..+.-||   ..||+|+|++++|||++.       ++.+.++||+.+..
T Consensus       138 ~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        138 RLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            355688999999999999   999999999999999985       46789999998743

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.92  E-value=1.1e-05  Score=64.91  Aligned_cols=51  Identities=18%  Similarity=0.275  Sum_probs=45.6

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceeecccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSI  147 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~Dfg~a~~~  147 (284)
                      ..+..++.+++..+.-||   ..||+|+|+++.|||++.++   .+.++||+.++..
T Consensus       118 ~~~~~ll~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  118 SQRRELLRALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             hhHHHHHHHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            456789999999999999   99999999999999999887   7899999977553

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=97.92  E-value=4.5e-05  Score=60.86  Aligned_cols=50  Identities=18%  Similarity=0.087  Sum_probs=43.4

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc--ceeecccccccc
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV--AQLFDFTLSLSI  147 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~Dfg~a~~~  147 (284)
                      .+..+..+++..++-||   ..|+.|+|+-+.||+++.++.  +.+.||.-++..
T Consensus       129 ~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        129 VRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence            34589999999999999   999999999999999986676  899999866543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.88  E-value=7.7e-05  Score=60.31  Aligned_cols=31  Identities=16%  Similarity=0.321  Sum_probs=26.1

Q ss_pred             CCeeecccccCcEEEec--CCcceeeccccccc
Q 039895          116 RPVVSRDIKPTTIVLQE--ENVAQLFDFTLSLS  146 (284)
Q Consensus       116 ~~ivHrDlkp~NILl~~--~~~~kl~Dfg~a~~  146 (284)
                      ..++|+|+.|.||+++.  ++.+.|.||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            45799999999999998  56688999997743

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.52  E-value=0.00028  Score=56.61  Aligned_cols=89  Identities=12%  Similarity=0.105  Sum_probs=66.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .++|...+++-......|.+-..+|..+.+|.....                                            
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ek  109 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEK  109 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeee
Confidence            356766667777777778888888999999988765                                            


Q ss_pred             ----CCCc----------------hh-HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 ----FPFS----------------VS-KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 ----~~~~----------------~~-~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                          ++..                .. .-.++..+.+++.-||   ..|++|+|..|+|++++.++ +++.||+..+.
T Consensus       110 k~~~~~~~~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i~iID~~~k~~  183 (229)
T PF06176_consen  110 KIFRYTSSYVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-IRIIDTQGKRM  183 (229)
T ss_pred             eeccceeEEEEEEEEecCeecccchhcCHHHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc-EEEEECccccc
Confidence                0000                00 1135567889999999   99999999999999998655 89999986543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.47  E-value=0.00043  Score=62.87  Aligned_cols=50  Identities=14%  Similarity=0.171  Sum_probs=40.0

Q ss_pred             CCCcceecHHHHHHHh------------cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC
Q 039895           39 HNPIRSFSADELKTAT------------DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT   89 (284)
Q Consensus        39 ~~~~~~~~~~~l~~~~------------~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~   89 (284)
                      ....+.++++|+....            ..|+. +.||.-+.|.||+|+. +|..||||+-.++
T Consensus       134 qD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  134 QDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDE-EPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             hccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCc-chhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            3456667888876643            45653 6899999999999999 9999999998777

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=96.99  E-value=0.0024  Score=50.70  Aligned_cols=82  Identities=20%  Similarity=0.193  Sum_probs=64.5

Q ss_pred             cCCCCCCeeeecCC-ceEEEEEeCCcceEEEeecCC--------------------------------------------
Q 039895           55 DDFDGGKVIMKCLF-YKLYKGFLQDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~-g~Vy~~~~~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .+++..+.||.|.. |.||++..+|+.+|+|++..-                                            
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            67888899999999 999999999999999994321                                            


Q ss_pred             ------CCCc-------------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccC
Q 039895           90 ------FPFS-------------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT  126 (284)
Q Consensus        90 ------~~~~-------------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~  126 (284)
                            .|..                                     ....+-+.+|.+-|..+|   ..+|+-+|+++.
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~~~~~~~~~~~~~dl~~~~---k~gI~~~Dv~~~  193 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDPPLQIRDIPQMLRDLKILH---KLGIVPRDVKPR  193 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCccccchhHHHHHHHHHHHHH---HCCeeeccCccc
Confidence                  0100                                     012234677888899999   999999999999


Q ss_pred             cEEEecCCcceeeccccc
Q 039895          127 TIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       127 NILl~~~~~~kl~Dfg~a  144 (284)
                      |..   +  -+|+|||.+
T Consensus       194 ny~---~--G~lvDfs~~  206 (207)
T PF13095_consen  194 NYR---G--GKLVDFSSS  206 (207)
T ss_pred             ccc---C--CEEEecccC
Confidence            987   3  389999864

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.95  E-value=0.048  Score=49.17  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=63.3

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  173 (284)
                      .....++.|+..||.++|   +.|+.-+-|.|.+||++.+..++|+..|....+..+..                 |.+.
T Consensus       393 ~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~-----------------~~le  452 (655)
T KOG3741|consen  393 EVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT-----------------EPLE  452 (655)
T ss_pred             HHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecCCCC-----------------cchh
Confidence            455679999999999999   99999999999999999888888887776654433221                 1111


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCC
Q 039895          174 TGDFSEKSDVYSFGALLLELLTGKK  198 (284)
Q Consensus       174 ~~~~~~~~DvwS~G~il~elltg~~  198 (284)
                      .   -.+-|.=.||.+++.|.||..
T Consensus       453 ~---~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  453 S---QQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             H---HhhhhHHHHHHHHHHHhhccc
Confidence            1   246788999999999999954

>PHA03111 Ser/Thr kinase; Provisional

Probab=96.85  E-value=0.0051  Score=52.28  Aligned_cols=52  Identities=23%  Similarity=0.245  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHhc-cCCCCCeeecccccCcEEEecCC------------------cceeecccccccc
Q 039895           96 KLKIAIEIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEEN------------------VAQLFDFTLSLSI  147 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH-~~~~~~ivHrDlkp~NILl~~~~------------------~~kl~Dfg~a~~~  147 (284)
                      ..-+..||+.-.-.+. ..|..+.+|-||||+|||+-...                  .++|.||.+++..
T Consensus       281 ikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  351 (444)
T PHA03111        281 IKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVA  351 (444)
T ss_pred             HHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHc
Confidence            3446777765443342 22357799999999999995332                  3566777776543

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=96.76  E-value=0.0056  Score=52.27  Aligned_cols=48  Identities=25%  Similarity=0.309  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHH--hccC-CCCCeeecccccCcEEEecC------------------Ccceeecccccccc
Q 039895           98 KIAIEIASAVAY--LHVG-FSRPVVSRDIKPTTIVLQEE------------------NVAQLFDFTLSLSI  147 (284)
Q Consensus        98 ~i~~~i~~gL~~--LH~~-~~~~ivHrDlkp~NILl~~~------------------~~~kl~Dfg~a~~~  147 (284)
                      -+..|||  |-|  +.+. |..+.+|-||||+|||+-..                  -.+++.||.+|+..
T Consensus       279 fifLQia--LLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  347 (434)
T PF05445_consen  279 FIFLQIA--LLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVA  347 (434)
T ss_pred             HHHHHHH--HHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhc
Confidence            3555664  444  3222 35679999999999999432                  24567788777554

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.73  E-value=0.0042  Score=60.66  Aligned_cols=142  Identities=21%  Similarity=0.247  Sum_probs=90.4

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccC---cEEEecCCcceee--ccccccccCCCCccccCCCCcccCccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT---TIVLQEENVAQLF--DFTLSLSIPEGETHINDSNRVIGTFGFMA  168 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~---NILl~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  168 (284)
                      ...+.+..++.+||.|+|   +....|.-|..+   +-..+..+...++  ||+.+..+........    ..-+..+.+
T Consensus       286 ~~~r~~~~~~~~GL~~~h---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~----~~~~~~~~~  358 (1351)
T KOG1035|consen  286 ETLRILHQKLLEGLAYLH---SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS----DLLAEIRNA  358 (1351)
T ss_pred             HHHHHHHHHHhhhHHHHH---HhccceeEEecccccccccCccceeecchhhhcccccCCCcccchh----hcCcccccc
Confidence            344567888999999999   665555444444   3334455556666  8888777655433222    234566788


Q ss_pred             cccccCCCCCc--chhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhH
Q 039895          169 PEYRTTGDFSE--KSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKE  246 (284)
Q Consensus       169 PE~~~~~~~~~--~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
                      ||......++.  ..|+|.+|.....+..|..+.....                    ....+++....           
T Consensus       359 ~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~--------------------~~~~~l~~~~~-----------  407 (1351)
T KOG1035|consen  359 DEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA--------------------VPVSLLDVLST-----------  407 (1351)
T ss_pred             ccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc--------------------chhhhhccccc-----------
Confidence            88776655544  4799999999999998876532110                    00111111100           


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          247 QQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       247 ~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                         ....+....|+..++++|+++.+++..
T Consensus       408 ---~~~~d~~~~~~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  408 ---SELLDALPKCLDEDSEERLSALELLTH  434 (1351)
T ss_pred             ---hhhhhhhhhhcchhhhhccchhhhhhc
Confidence               025678889999999999999998764

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.67  E-value=0.0054  Score=47.49  Aligned_cols=84  Identities=13%  Similarity=0.071  Sum_probs=57.3

Q ss_pred             CCeeeecCCceEEEEEeCCcceEEEeecCCCCCc------------------------------------------hh--
Q 039895           60 GKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFS------------------------------------------VS--   95 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~------------------------------------------~~--   95 (284)
                      ...|++|.+|.||.|.+.|..+|+|+-.....-.                                          ..  
T Consensus        27 ~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~~~~~~~  106 (201)
T COG2112          27 EKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLGKLEIGG  106 (201)
T ss_pred             hhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchhhhhhcc
Confidence            4679999999999999999999999876651110                                          00  


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeeccccc-CcEEEecCCcceeeccccccc
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKP-TTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp-~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ..+-...+++.---|-   ..||-|..|.- ...++..++.+.|+||..|+.
T Consensus       107 ~rk~l~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112         107 DRKHLLRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             cHHHHHHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            1223344555533344   78899999874 444444455899999998863

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.61  E-value=0.0097  Score=48.56  Aligned_cols=28  Identities=7%  Similarity=0.099  Sum_probs=24.9

Q ss_pred             CCeeecccccCcEEEecCCcceeeccccc
Q 039895          116 RPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       116 ~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..++|+|+.|.||+++.++ +.|.||+.+
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a  180 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDF  180 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhc
Confidence            3568999999999999888 999999976

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK05231 homoserine kinase; Provisional

Probab=96.32  E-value=0.036  Score=47.63  Aligned_cols=30  Identities=17%  Similarity=0.463  Sum_probs=26.0

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..+++|+|+.|.|||++.+...-|.||+.+
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~  215 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFA  215 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccc
Confidence            468999999999999997665689999976

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.19  E-value=0.018  Score=49.86  Aligned_cols=87  Identities=8%  Similarity=0.074  Sum_probs=66.6

Q ss_pred             CCCeeeecCCceEEEEEe-CCcceEEEeecCC--------------------CCCc------------------------
Q 039895           59 GGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT--------------------FPFS------------------------   93 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--------------------~~~~------------------------   93 (284)
                      ....|..|.-+-||.++- +|..+|||+++..                    ||..                        
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            345799999999999999 9999999998765                    3332                        


Q ss_pred             ------------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcce
Q 039895           94 ------------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ  137 (284)
Q Consensus        94 ------------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k  137 (284)
                                                          .....+-.+++.-+.-|.+  ...+||.||.-=|+|+- +|.+.
T Consensus       228 IP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~Lyh-dG~ly  304 (520)
T KOG2270|consen  228 IPCPEPILLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNLLYH-DGKLY  304 (520)
T ss_pred             CCCCCceeeecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHH--HhceeccchhhhhheEE-CCEEE
Confidence                                                2334455667777777765  56899999999999986 67799


Q ss_pred             eeccccccccC
Q 039895          138 LFDFTLSLSIP  148 (284)
Q Consensus       138 l~Dfg~a~~~~  148 (284)
                      |+|.+-+....
T Consensus       305 iIDVSQSVE~D  315 (520)
T KOG2270|consen  305 IIDVSQSVEHD  315 (520)
T ss_pred             EEEccccccCC
Confidence            99988765443

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.18  E-value=0.01  Score=46.98  Aligned_cols=56  Identities=16%  Similarity=0.150  Sum_probs=47.8

Q ss_pred             CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           92 FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        92 ~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                      ....|.+||.+++..+.+|++.....+.-.|++++|+-+++++.+|+.|...+...
T Consensus        57 ~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   57 PWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            34789999999999999999654456777999999999999999999999866444

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.15  E-value=0.0019  Score=59.15  Aligned_cols=92  Identities=23%  Similarity=0.225  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD  176 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (284)
                      ..+...-+++|+|+|   +..=+|+|    ||+..+ +..+.+||+....+....    ......+|+.++|||+.....
T Consensus       339 ~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~----~~~t~~~~~~~~~pev~~~~~  406 (829)
T KOG0576|consen  339 AYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM----KPRTAIGTPEPLAPEVIQENT  406 (829)
T ss_pred             hhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCccc----ccccCCCCCCCCCchhhcccc
Confidence            345566678899999   66668888    777665 678999999988776554    223377999999999999999


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCC
Q 039895          177 FSEKSDVYSFGALLLELLTGKKIS  200 (284)
Q Consensus       177 ~~~~~DvwS~G~il~elltg~~p~  200 (284)
                      +....|+|+.|+--.++.-|.+|-
T Consensus       407 ~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  407 IDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             cccCCCccCCCcchhhcCCCCCCC
Confidence            999999999998777777776664

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.00  E-value=0.007  Score=51.47  Aligned_cols=85  Identities=11%  Similarity=0.085  Sum_probs=61.3

Q ss_pred             CCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------------   89 (284)
                      ++.++.||-|.-+.||.+-. +|++.++|.-.-+                                              
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp  173 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP  173 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999 7999999975433                                              


Q ss_pred             ---------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           90 ---------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        90 ---------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                               .|.-               ...-.+...+..-+.-|-   ..|+||+|..-=||++++++.++++||--.
T Consensus       174 VPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la---~~GlIHgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  174 VPKPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLA---NHGLIHGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             CCCcccccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHHHH---HcCceecccchheeEEecCCCEEEeechHh
Confidence                     0000               111122223333333444   789999999999999999999999999643

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.44  E-value=0.0027  Score=63.82  Aligned_cols=83  Identities=13%  Similarity=0.019  Sum_probs=66.6

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHH
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL  194 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ell  194 (284)
                      +.-.+|++||+-|.+|..+..++++++|+.+..........   ...+++.|+.|+....-.++.++|+|..|+.+|+..
T Consensus      1358 g~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~G---l~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs 1434 (2724)
T KOG1826|consen 1358 GNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFG---LELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRS 1434 (2724)
T ss_pred             CccchhhhhhhhccceecCCcccccccccccccCchHhhhh---hhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence            34478999999999999999999999999984433322222   256788899999888888888899999999999987


Q ss_pred             hCCCCC
Q 039895          195 TGKKIS  200 (284)
Q Consensus       195 tg~~p~  200 (284)
                      .|..+|
T Consensus      1435 ~~n~~f 1440 (2724)
T KOG1826|consen 1435 DGNAYF 1440 (2724)
T ss_pred             cccHHH
Confidence            776654

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=94.93  E-value=0.098  Score=43.86  Aligned_cols=45  Identities=16%  Similarity=0.231  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           99 IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        99 i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      .+..+-.++.-++.. ..-++|.|+.|.|+|.+..+.++|.||.-|
T Consensus       137 ~~~~l~~~l~~~~~~-~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyA  181 (269)
T COG0510         137 KLKELRRALEEVPKD-DLVPCHNDLNPGNLLLTDKGGLFLIDWEYA  181 (269)
T ss_pred             HHHHHHHHhhhcCCC-ceeeecCCCCccceEEcCCCcEEEEecccC
Confidence            344444555555521 136899999999999999899999999876

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.89  E-value=0.033  Score=47.66  Aligned_cols=30  Identities=23%  Similarity=0.554  Sum_probs=27.1

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..+++|+|+.+.||+++.++.+.|.||+.+
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccc
Confidence            578999999999999998887789999976

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=94.69  E-value=0.029  Score=45.25  Aligned_cols=75  Identities=16%  Similarity=0.222  Sum_probs=51.0

Q ss_pred             HHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhH
Q 039895          104 ASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDV  183 (284)
Q Consensus       104 ~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv  183 (284)
                      +.+|.-.|.. ..+.+|+|..|+||+-|+.|.+||.|=+.-..               .+.-|.--|   ....+.++.+
T Consensus       151 i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~---------------~~V~~vN~~---Y~~lT~~aE~  211 (308)
T PF07387_consen  151 IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE---------------NQVNMVNIE---YESLTQEAEV  211 (308)
T ss_pred             HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh---------------heeeEEeee---ccccChHHHH
Confidence            4567777844 68899999999999999999999999664311               111122211   1234667777


Q ss_pred             HHHHHHHHHHHhCC
Q 039895          184 YSFGALLLELLTGK  197 (284)
Q Consensus       184 wS~G~il~elltg~  197 (284)
                      -+|=.-+++++...
T Consensus       212 ~~fv~s~l~~v~~~  225 (308)
T PF07387_consen  212 KVFVKSCLKLVEKQ  225 (308)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77777777776643

The function of this family is unknown.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=94.64  E-value=0.026  Score=46.25  Aligned_cols=30  Identities=17%  Similarity=0.356  Sum_probs=25.8

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ...++|+|+.+.|||++.++..-|.||+.+
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a  192 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCL  192 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence            456999999999999987766679999976

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.49  E-value=0.013  Score=42.64  Aligned_cols=38  Identities=13%  Similarity=0.179  Sum_probs=31.6

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~   89 (284)
                      .+....|+ .+.||.|+.|.||+|++ +|+.||||+..+.
T Consensus         8 ~~~F~~fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen    8 DEIFDEFD-PEPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             HHHHHHCC-cchhhheehhhheeeeecccchhhhhhcchH
Confidence            33445666 47999999999999999 8999999998766

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.38  E-value=0.057  Score=44.08  Aligned_cols=30  Identities=17%  Similarity=0.361  Sum_probs=26.4

Q ss_pred             CCCeeecccccCcEEEec-CCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQE-ENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a  144 (284)
                      ...++|+|+.+.|||++. ++.+.+.||..+
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a  199 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYA  199 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCCCEEEEEcccC
Confidence            457999999999999997 578999999876

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.30  E-value=0.029  Score=45.40  Aligned_cols=30  Identities=17%  Similarity=0.412  Sum_probs=21.2

Q ss_pred             CCCeeecccccCcEEEe-cCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQ-EENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~-~~~~~kl~Dfg~a  144 (284)
                      ...++|+|+.|.|||++ .++.+.|.||+.+
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a  195 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDA  195 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccc
Confidence            57799999999999999 5565679999865

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=94.30  E-value=0.071  Score=45.43  Aligned_cols=30  Identities=20%  Similarity=0.306  Sum_probs=26.8

Q ss_pred             CCCeeecccccCcEEEecC----Ccceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEE----NVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~----~~~kl~Dfg~a  144 (284)
                      ...++|+|+.|.|||++.+    +.+.+.||..+
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            5679999999999999975    78999999876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.80  E-value=0.037  Score=46.98  Aligned_cols=30  Identities=17%  Similarity=0.459  Sum_probs=26.6

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..+++|+|+.|.|||++.++.+.|.||+.+
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            357999999999999998877789999876

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=93.68  E-value=0.096  Score=44.74  Aligned_cols=29  Identities=24%  Similarity=0.372  Sum_probs=25.1

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..+++|+|+.+.||+++. +.+.|.||+.+
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            468999999999999987 56789999865

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.57  E-value=0.43  Score=41.62  Aligned_cols=81  Identities=17%  Similarity=0.161  Sum_probs=54.0

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  173 (284)
                      .+.+.++.+.+.-+.-+-.  .-+.=|||+.-.||||+ +|.+.|+||-+++.-.+....        .....--|..+.
T Consensus       321 ~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfklsRl~~~q~~i--------sy~rldhp~lF~  389 (488)
T COG5072         321 EEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSYSQGII--------SYNRLDHPDLFN  389 (488)
T ss_pred             HHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeeeecccCCcee--------eccccCchhhhc
Confidence            5667777777666666653  55688999999999999 999999999999843222111        111122354455


Q ss_pred             CCCCCcchhHHHH
Q 039895          174 TGDFSEKSDVYSF  186 (284)
Q Consensus       174 ~~~~~~~~DvwS~  186 (284)
                      + .-+.+-+||-+
T Consensus       390 G-~dd~QFeIYrl  401 (488)
T COG5072         390 G-VDDYQFEIYRL  401 (488)
T ss_pred             C-ccceeeeHHHH
Confidence            3 33677788864

>PRK10271 thiK thiamine kinase; Provisional

Probab=93.51  E-value=0.052  Score=42.68  Aligned_cols=30  Identities=13%  Similarity=0.225  Sum_probs=25.5

Q ss_pred             CCeeecccccCcEEEecCCcceeeccccccc
Q 039895          116 RPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus       116 ~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ...+|+|+.|.|++++.++ ++++||+.+..
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            4569999999999998877 88999998743

>TIGR02721 ycfN_thiK thiamine kinase

Probab=93.36  E-value=0.06  Score=44.72  Aligned_cols=28  Identities=14%  Similarity=0.331  Sum_probs=24.9

Q ss_pred             CCeeecccccCcEEEecCCcceeeccccc
Q 039895          116 RPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       116 ~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..++|+|+.|.||+++.++ +.+.||..+
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a  173 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYA  173 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEecccc
Confidence            4689999999999999877 789999876

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=93.36  E-value=0.053  Score=44.61  Aligned_cols=30  Identities=13%  Similarity=0.134  Sum_probs=26.5

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ...++|+|+.|.|||++.++...|.||+.+
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a  191 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRL  191 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEcccc
Confidence            456899999999999998877889999876

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.04  E-value=0.065  Score=43.10  Aligned_cols=29  Identities=21%  Similarity=0.489  Sum_probs=20.7

Q ss_pred             CCeeecccccCcEEE-ecCCcceeeccccc
Q 039895          116 RPVVSRDIKPTTIVL-QEENVAQLFDFTLS  144 (284)
Q Consensus       116 ~~ivHrDlkp~NILl-~~~~~~kl~Dfg~a  144 (284)
                      ..++|.|+.|.|||+ +.++.++++||..+
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya  172 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYA  172 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHH
Confidence            467899999999999 88899999999876

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.81  E-value=0.15  Score=45.18  Aligned_cols=30  Identities=17%  Similarity=0.388  Sum_probs=25.8

Q ss_pred             CCCeeecccccCcEEEecCCcceeecccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                      ...++|+|+.|.|||+..+ .+++.||..+.
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEeccccc
Confidence            5679999999999999876 58999998764

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=92.23  E-value=0.11  Score=41.27  Aligned_cols=30  Identities=23%  Similarity=0.341  Sum_probs=25.0

Q ss_pred             CCCeeecccccCcEEEecCC-----cceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEEN-----VAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~-----~~kl~Dfg~a  144 (284)
                      ...++|+|+.+.||++..++     .+.+.||..+
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~  153 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLS  153 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccC
Confidence            45789999999999998554     5789999876

subfamily of choline kinases

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.12  E-value=0.2  Score=44.31  Aligned_cols=36  Identities=17%  Similarity=0.240  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN  134 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~  134 (284)
                      .+++.-.+.||.-+--  -.+.+|.|+.|.||++..+.
T Consensus       347 kkva~lg~~AllkMl~--vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  347 KKVAKLGVNALLKMLI--VDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             HHHHHHHHHHHHHHHH--hhcceecccCCCcEEEEecC
Confidence            3455555556544332  57899999999999996443

>PRK12396 5-methylribose kinase; Reviewed

Probab=91.93  E-value=0.23  Score=43.92  Aligned_cols=29  Identities=7%  Similarity=0.403  Sum_probs=25.1

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ...++|+||.|.||+++.++ +|+.|..++
T Consensus       226 ~~aLlHGDlHtGSI~v~~~~-~kvIDpEFA  254 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKNDS-TKVIDPEFA  254 (409)
T ss_pred             chhhccCcCCCCCEEecCCc-eEEEccccc
Confidence            67899999999999999764 899997766

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=91.68  E-value=0.13  Score=43.38  Aligned_cols=32  Identities=25%  Similarity=0.420  Sum_probs=25.6

Q ss_pred             CCCeeecccccCcEEEecCCc-ceeeccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENV-AQLFDFTLSLS  146 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~-~kl~Dfg~a~~  146 (284)
                      ...++|+|+.|.|||++.++. .-|.||+.+..
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            346899999999999997554 46999998733

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=91.67  E-value=0.26  Score=42.93  Aligned_cols=31  Identities=13%  Similarity=0.288  Sum_probs=26.4

Q ss_pred             CCCeeecccccCcEEEec-CCcceeecccccc
Q 039895          115 SRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSL  145 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~  145 (284)
                      ...++|+|+++.|||++. ++.+.+.||..+.
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            457899999999999986 4679999998763

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=91.30  E-value=0.36  Score=41.70  Aligned_cols=27  Identities=15%  Similarity=0.543  Sum_probs=24.4

Q ss_pred             eeecccccCcEEEecCCc-ceeeccccc
Q 039895          118 VVSRDIKPTTIVLQEENV-AQLFDFTLS  144 (284)
Q Consensus       118 ivHrDlkp~NILl~~~~~-~kl~Dfg~a  144 (284)
                      +||+|+.|.||+++.+.. +.+.||+-+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            999999999999998874 889999965

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=91.09  E-value=0.12  Score=44.35  Aligned_cols=30  Identities=10%  Similarity=0.204  Sum_probs=27.2

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..+++|+|+.+.|+|++.++.+.+.||..+
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~  224 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKA  224 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhc
Confidence            457999999999999999988999999876

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=90.29  E-value=0.26  Score=42.28  Aligned_cols=34  Identities=15%  Similarity=0.299  Sum_probs=29.3

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                      ...++|+|+.+.|++++..+.+-+.||+++..-.
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence            5679999999999999988888899999885543

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=90.17  E-value=0.44  Score=41.64  Aligned_cols=31  Identities=13%  Similarity=0.354  Sum_probs=25.9

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ...++|+|+.+.||+++.++ +++.|+..+..
T Consensus       191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~  221 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFAFY  221 (370)
T ss_pred             cceeeeccCCcccEEEcCCC-CEEEcCccccc
Confidence            67899999999999997654 78999886643

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PRK06148 hypothetical protein; Provisional

Probab=88.14  E-value=0.66  Score=46.50  Aligned_cols=32  Identities=19%  Similarity=0.354  Sum_probs=26.1

Q ss_pred             CCCeeecccccCcEEEecCC--cce-eeccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEEN--VAQ-LFDFTLSLS  146 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~--~~k-l~Dfg~a~~  146 (284)
                      ..++||.|+.+.|||++.++  .+. |.|||-+..
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            56799999999999999775  444 999997643

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=87.85  E-value=0.43  Score=43.51  Aligned_cols=82  Identities=22%  Similarity=0.230  Sum_probs=43.7

Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-CcccccccccccCCCCCCChhhHHHHHHHHHHH
Q 039895          178 SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELA  256 (284)
Q Consensus       178 ~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (284)
                      .+|+||||+|.++.|+.-|...+....     .......+...... ..........         ....++...+.++.
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~-----~s~~l~~i~k~~~~d~~~~~~a~e~---------~~~~~~d~~~~~~~  174 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELT-----ESEYLEILLKYYTDDQELLSTAMEH---------LIQLLADKKRLPLL  174 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHH-----HHHHHHHHHHhccCchhHHHHHHHH---------HHHHhhhHhHHHHh
Confidence            369999999999999998876543211     00011111111100 0000000000         11233444577889


Q ss_pred             HHhhcCCCCCCCCHHHH
Q 039895          257 FKCLSESEGDRPTIVQV  273 (284)
Q Consensus       257 ~~cl~~~p~~Rps~~ev  273 (284)
                      ..|+-..|..||...+.
T Consensus       175 ~~c~~~~~~ir~l~~~~  191 (725)
T KOG1093|consen  175 KKCLWLEPIIRPLPMEL  191 (725)
T ss_pred             ccCCccccccccchhHH
Confidence            99999999998865554

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=87.84  E-value=0.42  Score=41.42  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=24.9

Q ss_pred             CeeecccccCcEEEec-CCcceeecccccc
Q 039895          117 PVVSRDIKPTTIVLQE-ENVAQLFDFTLSL  145 (284)
Q Consensus       117 ~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~  145 (284)
                      -.+|.|+.+.|||++. ++.+++.||..|.
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            4789999999999974 5789999998763

>PLN02756 S-methyl-5-thioribose kinase

Probab=87.03  E-value=0.83  Score=40.66  Aligned_cols=29  Identities=14%  Similarity=0.405  Sum_probs=24.6

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ...++|+||.|.||+++.++ +++.|..++
T Consensus       229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~  257 (418)
T PLN02756        229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFA  257 (418)
T ss_pred             ccceeecCCCCCcEEEcCCC-ceEecchhh
Confidence            67899999999999999876 788886654

>PRK11768 serine/threonine protein kinase; Provisional

Probab=87.01  E-value=1  Score=38.90  Aligned_cols=28  Identities=14%  Similarity=0.222  Sum_probs=23.9

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..+++|+|+.+.|||++ + .+.|.||+-+
T Consensus       195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~  222 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDA  222 (325)
T ss_pred             CccceecCCCchhcccc-C-CcEEEeCCCC
Confidence            56789999999999995 4 5789999976

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	284
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-20
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-19
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-17
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-16
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-11
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-11
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-11
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		6e-11
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-11
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-11
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		6e-11
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		9e-11
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-10
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-10
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-10
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-09
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-09
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-09
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-09
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-09
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		5e-09
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		7e-09
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-09
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-08
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-08
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-08
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-08
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-08
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		4e-08
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		5e-08
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		6e-08
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		6e-08
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		6e-08
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		7e-08
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		7e-08
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		7e-08
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		8e-08
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		8e-08
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		8e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		9e-08
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-08
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		9e-08
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		9e-08
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		9e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		9e-08
4h58_A	275	Braf In Complex With Compound 3 Length = 275		9e-08
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		9e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		9e-08
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		9e-08
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		9e-08
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		9e-08
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-07
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-07
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		1e-07
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-07
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-07
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-07
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-07
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-07
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-07
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-07
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-07
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-07
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-07
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-07
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-07
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-07
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-07
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-07
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-07
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-07
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-07
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-07
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-07
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-07
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-07
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-07
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-07
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-07
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		3e-07
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-07
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-07
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-07
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-07
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-07
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-07
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-07
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-07
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-07
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-07
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-07
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-07
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-07
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-07
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-07
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-07
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-07
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-07
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-07
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-07
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-07
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-07
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-07
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		4e-07
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		4e-07
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-07
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-07
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-07
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-07
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-07
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-07
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-07
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		4e-07
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-07
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-07
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-07
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-07
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		5e-07
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-07
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-07
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-07
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		5e-07
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		5e-07
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		6e-07
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		6e-07
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-07
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		6e-07
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		7e-07
3a4o_X	286	Lyn Kinase Domain Length = 286		7e-07
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		7e-07
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		7e-07
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-07
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		8e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-07
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		9e-07
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		9e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		9e-07
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-06
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		1e-06
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-06
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-06
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-06
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-06
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-06
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-06
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-06
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-06
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-06
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-06
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-06
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-06
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-06
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-06
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-06
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-06
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-06
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		2e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-06
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-06
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-06
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-06
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		2e-06
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		2e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-06
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-06
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-06
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-06
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-06
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-06
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-06
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-06
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-06
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		3e-06
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-06
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		3e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-06
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		4e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-06
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		4e-06
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		4e-06
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		4e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		4e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-06
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-06
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		4e-06
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		4e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-06
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-06
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		5e-06
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		5e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		5e-06
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		5e-06
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-06
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		5e-06
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		5e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-06
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		5e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		6e-06
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		6e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		6e-06
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		6e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		6e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		6e-06
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		6e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		6e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		6e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		6e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		6e-06
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		6e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		6e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		6e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		6e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		7e-06
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		7e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		7e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		7e-06
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		7e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		7e-06
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		7e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		7e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		7e-06
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		7e-06
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		7e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		7e-06
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		8e-06
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		8e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		8e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		8e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		8e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		8e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		8e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		9e-06
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		9e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		9e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		9e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		9e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		9e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-05
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-05
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-05
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-05
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-05
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		2e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-05
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-05
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		3e-05
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-05
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-05
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-05
3b2t_A	311	Structure Of Phosphotransferase Length = 311		3e-05
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		3e-05
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-05
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		3e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-05
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		4e-05
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		4e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-05
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		4e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		4e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-05
3kk9_A	282	Camkii Substrate Complex B Length = 282		4e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-05
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-05
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		4e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-05
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		4e-05
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		4e-05
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		4e-05
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		4e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-05
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		4e-05
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		4e-05
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		4e-05
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		4e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-05
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		4e-05
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		4e-05
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		4e-05
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		5e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-05
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		5e-05
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-05
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		5e-05
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		5e-05
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		5e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		5e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		5e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		5e-05
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		5e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		5e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		5e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		5e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-05
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		5e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		5e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		5e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-05
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		5e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		6e-05
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		6e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		6e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		6e-05
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		6e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-05
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		6e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		6e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-05
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		6e-05
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		7e-05
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		7e-05
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		7e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		7e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		7e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		7e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		7e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		7e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		7e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		7e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		7e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		7e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		7e-05
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		8e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		8e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		8e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		8e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		8e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		8e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		8e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		8e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		8e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		8e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		8e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		8e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		8e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		8e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		8e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		8e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		8e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		8e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		8e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		8e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		8e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		8e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		8e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		8e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		8e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-05
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		9e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		9e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		9e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		9e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		9e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		9e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		9e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		9e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		9e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-04
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-04
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-04
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		1e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		1e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-04
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		1e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-04
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-04
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-04
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-04
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-04
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-04
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-04
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-04
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-04
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-04
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-04
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-04
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-04
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-04
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-04
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-04
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-04
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-04
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-04
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-04
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-04
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-04
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-04
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-04
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-04
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-04
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-04
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		3e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		3e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-04
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-04
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		3e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-04
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		3e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		3e-04
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		3e-04
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		3e-04
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		3e-04
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		3e-04
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		3e-04
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		3e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		3e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		3e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		3e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		4e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		4e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		4e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		4e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		4e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		5e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		5e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		5e-04
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-04
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-04
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		5e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-04
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		5e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-04
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-04
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		5e-04
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-04
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		5e-04
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		5e-04
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		5e-04
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		6e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		6e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		6e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		6e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		6e-04
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		6e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		6e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		6e-04
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		6e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		6e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		6e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		6e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		6e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		6e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		6e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		6e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		6e-04
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-04
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		6e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		6e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		6e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		6e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		6e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		6e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		6e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		6e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-04
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		6e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		6e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-04
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		6e-04
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		6e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		6e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		6e-04
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		6e-04
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		6e-04
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		6e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		7e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		7e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		7e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		8e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		8e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		8e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		8e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		8e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           +IA+  A  +AYLH      ++ RD+K   I+L EE  A + DF L+  +   + H+  +
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV 217
            R  GT G +APEY +TG  SEK+DV+ +G +LLEL+TG++    +   + +D  L D V
Sbjct: 203 VR--GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL 277
           K  ++ +  + +VD  + G     + ++E + LI  ++A  C   S  +RP + +V + L
Sbjct: 261 KGLLKEKKLEALVDVDLQGN----YKDEEVEQLI--QVALLCTQSSPMERPKMSEVVRML 314

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           +IA+  A  +AYLH      ++ RD+K   I+L EE  A + DF L+  +   + H+  +
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV 217
            R  G  G +APEY +TG  SEK+DV+ +G +LLEL+TG++    +   + +D  L D V
Sbjct: 195 VR--GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL 277
           K  ++ +  + +VD  + G     + ++E + LI  ++A  C   S  +RP + +V + L
Sbjct: 253 KGLLKEKKLEALVDVDLQGN----YKDEEVEQLI--QVALLCTQSSPMERPKMSEVVRML 306

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 78  DRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ 137
           D P   M +E        +L+I I  A  + YLH   +R ++ RD+K   I+L E  V +
Sbjct: 130 DLPTMSMSWE-------QRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPK 179
Query: 138 LFDFTLSLSIPE-GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + DF +S    E G+TH+     V GT G++ PEY   G  +EKSDVYSFG +L E+L  
Sbjct: 180 ITDFGISKKGTELGQTHLXXV--VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 197 KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELA 256
           +     S     E   L +   +   N   ++IVDP +  +   + PE  ++     + A
Sbjct: 238 RSAIVQSL--PREMVNLAEWAVESHNNGQLEQIVDPNLADK---IRPESLRKF---GDTA 289
Query: 257 FKCLSESEGDRPTIVQVAKQL 277
            KCL+ S  DRP++  V  +L
Sbjct: 290 VKCLALSSEDRPSMGDVLWKL 310

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 78  DRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ 137
           D P   M +E        +L+I I  A  + YLH   +R ++ RD+K   I+L E  V +
Sbjct: 130 DLPTMSMSWE-------QRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPK 179
Query: 138 LFDFTLSLSIPE-GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + DF +S    E  +TH+     V GT G++ PEY   G  +EKSDVYSFG +L E+L  
Sbjct: 180 ITDFGISKKGTELDQTHLXXV--VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 197 KKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELA 256
           +     S     E   L +   +   N   ++IVDP +  +   + PE  ++     + A
Sbjct: 238 RSAIVQSL--PREMVNLAEWAVESHNNGQLEQIVDPNLADK---IRPESLRKF---GDTA 289
Query: 257 FKCLSESEGDRPTIVQVAKQL 277
            KCL+ S  DRP++  V  +L
Sbjct: 290 VKCLALSSEDRPSMGDVLWKL 310

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
Query: 66  CLFY-KLYKGFLQDRPISVMKFEDTFPFSVS-KLKIAIEIASAVAYLHVGFSRPVVSRDI 123
           CL Y  +  G L DR   +   + T P S   + KIA   A+ + +LH       + RDI
Sbjct: 106 CLVYVYMPNGSLLDR---LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDI 159
Query: 124 KPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDV 183
           K   I+L E   A++ DF L+ +  +    +  S R++GT  +MAPE    G+ + KSD+
Sbjct: 160 KSANILLDEAFTAKISDFGLARASEKFAQTVMXS-RIVGTTAYMAPE-ALRGEITPKSDI 217
Query: 184 YSFGALLLELLTG 196
           YSFG +LLE++TG
Sbjct: 218 YSFGVVLLEIITG 230

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 66  CLFY-KLYKGFLQDRPISVMKFEDTFPFSVS-KLKIAIEIASAVAYLHVGFSRPVVSRDI 123
           CL Y  +  G L DR   +   + T P S   + KIA   A+ + +LH       + RDI
Sbjct: 106 CLVYVYMPNGSLLDR---LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDI 159
Query: 124 KPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDV 183
           K   I+L E   A++ DF L+ +  E         R++GT  +MAPE    G+ + KSD+
Sbjct: 160 KSANILLDEAFTAKISDFGLARA-SEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDI 217
Query: 184 YSFGALLLELLTG 196
           YSFG +LLE++TG
Sbjct: 218 YSFGVVLLEIITG 230

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 66  CLFY-KLYKGFLQDRPISVMKFEDTFPFSVS-KLKIAIEIASAVAYLHVGFSRPVVSRDI 123
           CL Y  +  G L DR   +   + T P S   + KIA   A+ + +LH       + RDI
Sbjct: 100 CLVYVYMPNGSLLDR---LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDI 153
Query: 124 KPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDV 183
           K   I+L E   A++ DF L+ +  E         R++GT  +MAPE    G+ + KSD+
Sbjct: 154 KSANILLDEAFTAKISDFGLARA-SEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDI 211
Query: 184 YSFGALLLELLTG 196
           YSFG +LLE++TG
Sbjct: 212 YSFGVVLLEIITG 224

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 98  KIAIE-IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           K AIE IA A   L+      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  +++PE         +SDVYS G +L E+LTG+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 98  KIAIE-IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           K AIE IA A   L+      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 133 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  +++PE         +SDVYS G +L E+LTG+
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 98  KIAIE-IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           K AIE IA A   L+      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  +++PE         +SDVYS G +L E+LTG+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 98  KIAIE-IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           K AIE IA A   L+      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  +++PE         +SDVYS G +L E+LTG+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 98  KIAIE-IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           K AIE IA A   L+      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  +++PE         +SDVYS G +L E+LTG+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 66  CLFYKLY--KGFLQDRPISVMKFEDTFPFSVS-KLKIAIEIASAVAYLHVGFSRPVVSRD 122
           CL Y +Y   G L DR   +   + T P S   + KIA   A+ + +LH       + RD
Sbjct: 97  CLVY-VYXPNGSLLDR---LSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRD 149
Query: 123 IKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSD 182
           IK   I+L E   A++ DF L+ +  +    +  S R++GT  + APE    G+ + KSD
Sbjct: 150 IKSANILLDEAFTAKISDFGLARASEKFAQXVXXS-RIVGTTAYXAPE-ALRGEITPKSD 207
Query: 183 VYSFGALLLELLTG 196
           +YSFG +LLE++TG
Sbjct: 208 IYSFGVVLLEIITG 221

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 98  KIAIE-IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           K AIE IA A   L+      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  +++PE         +SDVYS G +L E+LTG+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 35/204 (17%)
Query: 82  SVMKFEDTFPF--SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVAQL 138
           +V+   +  P+  +   +   ++ +  VAYLH    + ++ RD+KP  ++L     V ++
Sbjct: 89  NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 148
Query: 139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
            DF  +  I   +TH+ ++    G+  +MAPE     ++SEK DV+S+G +L E++T +K
Sbjct: 149 CDFGTACDI---QTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
Query: 199 ISYSSHFDD--GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELA 256
                 FD+  G  +R+   V         K +  P     E LM               
Sbjct: 203 -----PFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI----ESLM--------------- 238
Query: 257 FKCLSESEGDRPTIVQVAKQLRQI 280
            +C S+    RP++ ++ K +  +
Sbjct: 239 TRCWSKDPSQRPSMEEIVKIMTHL 262

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 35/204 (17%)
Query: 82  SVMKFEDTFPF--SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVAQL 138
           +V+   +  P+  +   +   ++ +  VAYLH    + ++ RD+KP  ++L     V ++
Sbjct: 88  NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI 147
Query: 139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
            DF  +  I   +TH+ ++    G+  +MAPE     ++SEK DV+S+G +L E++T +K
Sbjct: 148 CDFGTACDI---QTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
Query: 199 ISYSSHFDD--GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELA 256
                 FD+  G  +R+   V         K +  P     E LM               
Sbjct: 202 P-----FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI----ESLM--------------- 237
Query: 257 FKCLSESEGDRPTIVQVAKQLRQI 280
            +C S+    RP++ ++ K +  +
Sbjct: 238 TRCWSKDPSQRPSMEEIVKIMTHL 261

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE--EN------VAQLFDFTLSLSIPEGE 151
           A++IA  + YLH     P++ RD+K + I++ +  EN      + ++ DF L+      E
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----RE 165
Query: 152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            H        G + +MAPE      FS+ SDV+S+G LL ELLTG+
Sbjct: 166 WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
           S+++    FP  V+K   A E+  A+ YLH   S+ ++ RD+KP  I+L +    ++ DF
Sbjct: 95  SLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDF 150
Query: 142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +  +P+       +  + GT  ++APE  +T  +++  D +SFG L+ E+L G    Y
Sbjct: 151 GFAKYVPDV------TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 204
Query: 202 SSH 204
            S+
Sbjct: 205 DSN 207

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A A+ +LH   S  ++ RD+KP  I+L EE   +L DF LS    E   H   +    
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  +MAPE       ++ +D +SFG L+ E+LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A A+ +LH   S  ++ RD+KP  I+L EE   +L DF LS    E   H   +    
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 188
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  +MAPE       ++ +D +SFG L+ E+LTG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A A+ +LH   S  ++ RD+KP  I+L EE   +L DF LS    E   H   +    
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  +MAPE       ++ +D +SFG L+ E+LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 31/149 (20%)
Query: 70  KLYKGFLQDRPISVMKF-----------EDTFPFSVS-KLKIAIEIASAVAYLHVGFSRP 117
           KLY G + + P  VM+F           +   P   S KL++ ++IA  + Y+    + P
Sbjct: 87  KLY-GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPP 144
Query: 118 VVSRDIKPTTIVLQ--EENV---AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR 172
           +V RD++   I LQ  +EN    A++ DF+LS      +  ++  + ++G F +MAPE  
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLS------QQSVHSVSGLLGNFQWMAPE-- 196
Query: 173 TTG----DFSEKSDVYSFGALLLELLTGK 197
           T G     ++EK+D YSF  +L  +LTG+
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 9/116 (7%)
Query: 92  FSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           F + KL  IA + A  + YLH   ++ ++ RD+K   I L E+N  ++ DF L+ ++   
Sbjct: 105 FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-TVKSR 160
Query: 151 ETHINDSNRVIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLELLTGKKISYSS 203
            +  +   ++ G+  +MAPE    + +  +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 161 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG-QLPYSN 215

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 31/149 (20%)
Query: 70  KLYKGFLQDRPISVMKF-----------EDTFPFSVS-KLKIAIEIASAVAYLHVGFSRP 117
           KLY G + + P  VM+F           +   P   S KL++ ++IA  + Y+    + P
Sbjct: 87  KLY-GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPP 144
Query: 118 VVSRDIKPTTIVLQ--EENV---AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR 172
           +V RD++   I LQ  +EN    A++ DF LS      +  ++  + ++G F +MAPE  
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLS------QQSVHSVSGLLGNFQWMAPE-- 196
Query: 173 TTG----DFSEKSDVYSFGALLLELLTGK 197
           T G     ++EK+D YSF  +L  +LTG+
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A  + +LH   S  ++ RD+KP  I+L EE   +L DF LS    E   H   +    
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KEAIDHEKKAYSFC 191
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  +MAPE       S  +D +S+G L+ E+LTG
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   +  LH      +V RD+KP  I+L +    ++ D  L++ +PEG+T       
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--- 345
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            +GT G+MAPE      ++   D ++ G LL E++ G+
Sbjct: 346 -VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   +  LH      +V RD+KP  I+L +    ++ D  L++ +PEG+T       
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT----IKG 344
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            +GT G+MAPE      ++   D ++ G LL E++ G+
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 86  FEDTFPFSV-SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS 144
            E   P SV + +    +I   + + H      +V RDIKP  I++      ++FDF ++
Sbjct: 102 IESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIA 158
Query: 145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++   ET +  +N V+GT  + +PE        E +D+YS G +L E+L G+
Sbjct: 159 KAL--SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 92  FSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           F + KL  IA + A  + YLH   ++ ++ RD+K   I L E+N  ++ DF L+      
Sbjct: 117 FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173
Query: 151 ETHINDSNRVIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLELLTGKKISYSS 203
               +   ++ G+  +MAPE    + +  +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 174 SGS-HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG-QLPYSN 227

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 92  FSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           F + KL  IA + A  + YLH   ++ ++ RD+K   I L E+N  ++ DF L+      
Sbjct: 117 FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173
Query: 151 ETHINDSNRVIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLELLTGKKISYSS 203
               +   ++ G+  +MAPE    + +  +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 174 SGS-HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG-QLPYSN 227

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           +L +A ++A  + YLH   + P+V RD+K   +++ ++   ++ DF LS       +   
Sbjct: 139 RLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFL 194
Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            S    GT  +MAPE       +EKSDVYSFG +L EL T
Sbjct: 195 XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 8   RKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSF-----SADELKTATDDFDGGKV 62
           +K++ K ++ K ++    +LL+      N KH  +        +AD+L    D  +GG+ 
Sbjct: 73  KKAILKKKEEKHIMSERNVLLK------NVKHPFLVGLHFSFQTADKLYFVLDYINGGE- 125
Query: 63  IMKCLFYKLYK--GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
               LFY L +   FL+ R     +F             A EIASA+ YLH   S  +V 
Sbjct: 126 ----LFYHLQRERCFLEPR----ARF------------YAAEIASALGYLH---SLNIVY 162
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+KP  I+L  +    L DF L     E   H + ++   GT  ++APE      +   
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLC---KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRT 219
Query: 181 SDVYSFGALLLELLTGKKISYS 202
            D +  GA+L E+L G    YS
Sbjct: 220 VDWWCLGAVLYEMLYGLPPFYS 241

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           +L +A ++A  + YLH   + P+V R++K   +++ ++   ++ DF LS    +  T ++
Sbjct: 139 RLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLS 195
Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            S    GT  +MAPE       +EKSDVYSFG +L EL T
Sbjct: 196 -SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 31/149 (20%)
Query: 70  KLYKGFLQDRPISVMKF-----------EDTFPFSVS-KLKIAIEIASAVAYLHVGFSRP 117
           KLY G + + P  VM+F           +   P   S KL++ ++IA  + Y+    + P
Sbjct: 87  KLY-GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPP 144
Query: 118 VVSRDIKPTTIVLQ--EENV---AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR 172
           +V RD++   I LQ  +EN    A++ DF  S      +  ++  + ++G F +MAPE  
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTS------QQSVHSVSGLLGNFQWMAPE-- 196
Query: 173 TTG----DFSEKSDVYSFGALLLELLTGK 197
           T G     ++EK+D YSF  +L  +LTG+
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANSF 194
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T    S+ SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 20/111 (18%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-------------TL 143
           L I I+IA AV +LH   S+ ++ RD+KP+ I    ++V ++ DF             T+
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
              +P   TH       +GT  +M+PE     ++S K D++S G +L ELL
Sbjct: 224 LTPMPAYATHXGQ----VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 94  VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH 153
           V  L++  +I   V Y+H   S+ +++RD+KP+ I L +    ++ DF L  S+      
Sbjct: 122 VLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK----- 173
Query: 154 INDSNRV--IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            ND  R    GT  +M+PE  ++ D+ ++ D+Y+ G +L ELL
Sbjct: 174 -NDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 94  VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH 153
           V  L++  +I   V Y+H   S+ ++ RD+KP+ I L +    ++ DF L  S+      
Sbjct: 136 VLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK----- 187
Query: 154 INDSNRV--IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            ND  R    GT  +M+PE  ++ D+ ++ D+Y+ G +L ELL
Sbjct: 188 -NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 92  FSVSKLKI-AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           FS + ++  A EI   + ++H   +R VV RD+KP  I+L E    ++ D  L+    + 
Sbjct: 289 FSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 151 ETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTG 196
           + H +     +GT G+MAPE    G  +   +D +S G +L +LL G
Sbjct: 346 KPHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 92  FSVSKLKI-AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           FS + ++  A EI   + ++H   +R VV RD+KP  I+L E    ++ D  L+    + 
Sbjct: 288 FSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 344
Query: 151 ETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTG 196
           + H +     +GT G+MAPE    G  +   +D +S G +L +LL G
Sbjct: 345 KPHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 92  FSVSKLKI-AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           FS + ++  A EI   + ++H   +R VV RD+KP  I+L E    ++ D  L+    + 
Sbjct: 289 FSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 151 ETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTG 196
           + H +     +GT G+MAPE    G  +   +D +S G +L +LL G
Sbjct: 346 KPHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 92  FSVSKLKI-AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG 150
           FS + ++  A EI   + ++H   +R VV RD+KP  I+L E    ++ D  L+    + 
Sbjct: 289 FSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 151 ETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTG 196
           + H +     +GT G+MAPE    G  +   +D +S G +L +LL G
Sbjct: 346 KPHAS-----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 83  VMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFT 142
           +   +  +P+S  ++  A +IAS +AYLH   S  ++ RD+     +++E     + DF 
Sbjct: 98  IKSMDSQYPWS-QRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFG 153
Query: 143 LSLSI------PEGETHINDSNR-----VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLL 191
           L+  +      PEG   +   +R     V+G   +MAPE      + EK DV+SFG +L 
Sbjct: 154 LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLC 213
Query: 192 ELL 194
           E++
Sbjct: 214 EII 216

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 109 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 165
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y    +
Sbjct: 166 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 211

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 170
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+ ++    +  + 
Sbjct: 135 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQ 190
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 239

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 176
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 171
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+ ++    +  + 
Sbjct: 134 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQ 189
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 190 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 238

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y    +
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 169
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+ ++    +  + 
Sbjct: 107 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQ 162
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 211

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 191
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+ ++    +  + 
Sbjct: 112 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQ 167
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 216

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+ ++    +  + 
Sbjct: 112 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQ 167
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 216

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+ ++    +  + 
Sbjct: 109 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQ 164
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 165 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 213

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+ ++    +  + 
Sbjct: 107 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQ 162
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 211

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 172
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 110 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 166
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 167 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 207

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANSF 191
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   +AYL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 170
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +MAPE      +S +SD++S G  L+EL  G+
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 108 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 164
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y    +
Sbjct: 165 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 210

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 199
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 112 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 168
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y    +
Sbjct: 169 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 214

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 192
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 192
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 192
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANSF 195
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANAF 192
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 195
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 285 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 342 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 86  FEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
            EDT  F ++      EI+ A+ +LH    + ++ RD+KP  I+L  +   +L DF L  
Sbjct: 119 MEDTACFYLA------EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
Query: 146 -SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            SI +G      ++   GT  +MAPE       +   D +S GAL+ ++LTG
Sbjct: 170 ESIHDGTV----THXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE----- 151
           L I ++IA AV +LH   S+ ++ RD+KP+ I    ++V ++ DF L  ++ + E     
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 152 -THINDSNRVIGTFG---FMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            T +    R  G  G   +M+PE      +S K D++S G +L ELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 285 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 342 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E    ++ DF L+ ++    +    
Sbjct: 135 IDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQ 190
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSSHFDD------ 207
             +  G+  +MAPE     D   FS +SDVYS+G +L EL+TG ++ Y SH ++      
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG-ELPY-SHINNRDQIIF 248
Query: 208 --GEDYRLQDLVKKY 220
             G  Y   DL K Y
Sbjct: 249 MVGRGYASPDLSKLY 263

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGETHINDSNRV 160
           EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF T  +  PE +     +N  
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 197
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           +GT  +++PE  T     + SD+++ G ++ +L+ G
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 285 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 342 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 86  FEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
            EDT  F ++      EI+ A+ +LH    + ++ RD+KP  I+L  +   +L DF L  
Sbjct: 119 MEDTACFYLA------EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
Query: 146 -SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            SI +G      ++   GT  +MAPE       +   D +S GAL+ ++LTG
Sbjct: 170 ESIHDGTV----THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E     
Sbjct: 366 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 423 GAKF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K+ + I  A+ YL       V+ RD+KP+ I+L E    +L DF +S  + + +      
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA----K 181
Query: 158 NRVIGTFGFMAPEY-----RTTGDFSEKSDVYSFGALLLELLTGK 197
           +R  G   +MAPE       T  D+  ++DV+S G  L+EL TG+
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 172
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD++   I++ E  V ++ DF L   I + E       
Sbjct: 286 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGA 342
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 343 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 383

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P         + + 
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDTLC 168
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           ++ +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 116 MSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGA 172
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y    +
Sbjct: 173 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 218

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 74  GFLQDRPISVMKFE---DTF---PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           GF +D+ +S ++ E   D F   P ++  L   + ++A  + +L    SR  + RD+   
Sbjct: 172 GFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAAR 228
Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSF 186
            I+L E NV ++ DF L+  I +   ++   +  +    +MAPE      +S KSDV+S+
Sbjct: 229 NILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL-PLKWMAPESIFDKIYSTKSDVWSY 287
Query: 187 GALLLELLT 195
           G LL E+ +
Sbjct: 288 GVLLWEIFS 296

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A +IAS +AY+        V RD+    I++ E  V ++ DF L+  I + E       
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y
Sbjct: 176 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           ++ +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E       
Sbjct: 116 MSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 172
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
           +      + APE    G F+ KSDV+SFG LL EL T  ++ Y    +
Sbjct: 173 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 218

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTELC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 172
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P         + + 
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDDLC 193
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 172
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 133 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 184
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IND 156
           + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H +  
Sbjct: 119 RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +R +  F + APE   T  FS  SD + FG  L E+ T
Sbjct: 176 EHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 170
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IND 156
           + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H +  
Sbjct: 115 RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +R +  F + APE   T  FS  SD + FG  L E+ T
Sbjct: 172 EHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSN 158
           +I+SA+ YLH      ++ RD+KP  IVLQ   +  + ++ D   +  + +GE       
Sbjct: 130 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL----CT 182
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             +GT  ++APE      ++   D +SFG L  E +TG
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE 168
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 169 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RXXLC 169
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P         + + 
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDDLC 170
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSN 158
           +I+SA+ YLH      ++ RD+KP  IVLQ   +  + ++ D   +  + +GE       
Sbjct: 129 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL----CT 181
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             +GT  ++APE      ++   D +SFG L  E +TG
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P      +    + 
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTXLC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IND 156
           + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H +  
Sbjct: 125 RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 181
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +R +  F + APE   T  FS  SD + FG  L E+ T
Sbjct: 182 EHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IND 156
           + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H +  
Sbjct: 125 RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 181
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +R +  F + APE   T  FS  SD + FG  L E+ T
Sbjct: 182 EHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTDLC 172
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IND 156
           + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H +  
Sbjct: 115 RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +R +  F + APE   T  FS  SD + FG  L E+ T
Sbjct: 172 EHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTDLC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IND 156
           + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H +  
Sbjct: 115 RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 171
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +R +  F + APE   T  FS  SD + FG  L E+ T
Sbjct: 172 EHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IND 156
           + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H +  
Sbjct: 119 RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +R +  F + APE   T  FS  SD + FG  L E+ T
Sbjct: 176 EHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTDLC 168
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 193
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 174
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 175 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 170
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 113 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 169
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 170 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 212

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 120 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 176
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 177 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 219

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P      +    + 
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRTTLC 171
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 168
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 169 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 114 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 170
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 171 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 213

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 168
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 169 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A +I   +AYLH   S+  + R++    ++L  + + ++ DF L+ ++PEG  +   
Sbjct: 120 LLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                    + APE      F   SDV+SFG  L ELLT
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 121 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 177
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 178 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 220

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 115 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 166
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+          + 
Sbjct: 135 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS-HQ 190
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 239

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTDLC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RXXLC 170
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  + +IA  +A++     R  + RD++   I++    V ++ DF L+  I + E    +
Sbjct: 287 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL+E++T  +I Y
Sbjct: 344 GAKF--PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RXXLX 172
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 116 ELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RAALC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
           GT  ++ PE        EK D++S G L  E L GK    ++ + D
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +IA  +A++     R  + RD++   I++    V ++ DF L+  I + E    +  +  
Sbjct: 119 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF- 174
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
               + APE    G F+ KSDV+SFG LL+E++T  +I Y
Sbjct: 175 -PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 213

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 22/129 (17%)
Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE 133
           G L D  IS  +F +     V   +I  ++ S + Y+H      +V RD+KP  ++L+ +
Sbjct: 117 GELFDEIISRKRFSE-----VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 168
Query: 134 NV---AQLFDFTLSLSIPEGETHINDSNRV---IGTFGFMAPEYRTTGDFSEKSDVYSFG 187
           +     ++ DF LS       TH   S ++   IGT  ++APE    G + EK DV+S G
Sbjct: 169 SKDANIRIIDFGLS-------THFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWSTG 220
Query: 188 ALLLELLTG 196
            +L  LL+G
Sbjct: 221 VILYILLSG 229

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 113 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTTLC 164
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK ++++  A+ YL        V RD+    +++ E+NVA++ DF L+    +  +   D
Sbjct: 111 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQD 163
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           + ++     + APE      FS KSDV+SFG LL E+ +  ++ Y
Sbjct: 164 TGKL--PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+          + 
Sbjct: 107 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS-HQ 162
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 211

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH   ++ ++ RD+K   I L E+   ++ DF L+          + 
Sbjct: 127 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS-HQ 182
Query: 157 SNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSS 203
             ++ G+  +MAPE     D   +S +SDVY+FG +L EL+TG ++ YS+
Sbjct: 183 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG-QLPYSN 231

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P      +    + 
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRXXLC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RAALC 170
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K  +++ SA+ ++H   SR V+ RDIKP  + +    V +L D  L        T    +
Sbjct: 140 KYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---AA 193
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV 217
           + ++GT  +M+PE      ++ KSD++S G LL E+   +   Y      G+   L  L 
Sbjct: 194 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY------GDKMNLYSLC 247
Query: 218 KK 219
           KK
Sbjct: 248 KK 249

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 174
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 175 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 117 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 173
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 174 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 169 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 122 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 178
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 179 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 107 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 163
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 164 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 24/130 (18%)
Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-- 131
           G L D  IS  +F +     V   +I  ++ S + Y+H      +V RD+KP  ++L+  
Sbjct: 111 GELFDEIISRKRFSE-----VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 162
Query: 132 --EENVAQLFDFTLSLSIPEGETHINDSNRV---IGTFGFMAPEYRTTGDFSEKSDVYSF 186
             + N+ ++ DF LS       TH   S ++   IGT  ++APE    G + EK DV+S 
Sbjct: 163 SKDANI-RIIDFGLS-------THFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWST 213
Query: 187 GALLLELLTG 196
           G +L  LL+G
Sbjct: 214 GVILYILLSG 223

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK ++++  A+ YL        V RD+    +++ E+NVA++ DF L+    +  +   D
Sbjct: 105 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQD 157
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           + ++     + APE      FS KSDV+SFG LL E+ +  ++ Y
Sbjct: 158 TGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P           + 
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RAALC 167
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK ++++  A+ YL        V RD+    +++ E+NVA++ DF L+    +  +   D
Sbjct: 120 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQD 172
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           + ++     + APE      FS KSDV+SFG LL E+ +  ++ Y
Sbjct: 173 TGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 24/130 (18%)
Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-- 131
           G L D  IS  +F +     V   +I  ++ S + Y+H      +V RD+KP  ++L+  
Sbjct: 134 GELFDEIISRKRFSE-----VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 185
Query: 132 --EENVAQLFDFTLSLSIPEGETHINDSNRV---IGTFGFMAPEYRTTGDFSEKSDVYSF 186
             + N+ ++ DF LS       TH   S ++   IGT  ++APE    G + EK DV+S 
Sbjct: 186 SKDANI-RIIDFGLS-------THFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWST 236
Query: 187 GALLLELLTG 196
           G +L  LL+G
Sbjct: 237 GVILYILLSG 246

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 24/130 (18%)
Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-- 131
           G L D  IS  +F +     V   +I  ++ S + Y+H      +V RD+KP  ++L+  
Sbjct: 135 GELFDEIISRKRFSE-----VDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 186
Query: 132 --EENVAQLFDFTLSLSIPEGETHINDSNRV---IGTFGFMAPEYRTTGDFSEKSDVYSF 186
             + N+ ++ DF LS       TH   S ++   IGT  ++APE    G + EK DV+S 
Sbjct: 187 SKDANI-RIIDFGLS-------THFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVWST 237
Query: 187 GALLLELLTG 196
           G +L  LL+G
Sbjct: 238 GVILYILLSG 247

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A +I   +AYLH   ++  + R +    ++L  + + ++ DF L+ ++PEG  +   
Sbjct: 114 LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 170
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
                    + APE      F   SDV+SFG  L ELLT    + S H
Sbjct: 171 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPH 218

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK ++++  A+ YL        V RD+    +++ E+NVA++ DF L+    +  +   D
Sbjct: 292 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQD 344
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           + ++     + APE      FS KSDV+SFG LL E+ +  ++ Y
Sbjct: 345 TGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A +I   +AYLH   ++  + R +    ++L  + + ++ DF L+ ++PEG  +   
Sbjct: 115 LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 171
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
                    + APE      F   SDV+SFG  L ELLT    + S H
Sbjct: 172 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPH 219

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A +I   +AYLH   ++  + R++    ++L  + + ++ DF L+ ++PEG  +   
Sbjct: 120 LLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                    + APE      F   SDV+SFG  L ELLT
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  + +IA  +AY+     +  + RD++   +++ E  + ++ DF L+  I + E    +
Sbjct: 113 IDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  KI Y
Sbjct: 170 GAKF--PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 179
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A +I   +AYLH   ++  + RD+    ++L  + + ++ DF L+ ++PEG      
Sbjct: 137 LLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                    + APE      F   SDV+SFG  L ELLT
Sbjct: 194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 187
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P         + + 
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-----RDTLC 171
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  ++ PE        EK D++S G L  E L G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S   P           + 
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-----RTTLS 168
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ +F  S+  P           + 
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-----RTTLC 169
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 170 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 222
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P      +    + 
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS-----SRRTTLC 171
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  ++ PE        EK D++S G L  E L G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A+A++Y H   S+ V+ RDIKP  ++L      ++ +F  S+  P           + 
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-----RTTLC 170
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  ++ PE        EK D++S G L  E L GK
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +A ++A+ +AY+        + RD++   I++    + ++ DF L+  I + E       
Sbjct: 110 MAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGA 166
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           +      + APE    G F+ KSDV+SFG LL EL+T  ++ Y
Sbjct: 167 KF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 207

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+     +
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDEMA 163
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + R+++   I++ +    ++ DF L+  I + E    +
Sbjct: 108 LDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 164
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 165 GAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 199 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 256 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 300
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 301 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 352
Query: 280 IYQSN 284
           + Q+N
Sbjct: 353 LLQAN 357

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++I  A+ ++H    R ++ RDIK   I L ++   QL DF ++  +    + +  +   
Sbjct: 132 VQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELARAC 185
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           IGT  +++PE      ++ KSD+++ G +L EL T K
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 197 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 254 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 298
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 299 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 350
Query: 280 IYQSN 284
           + Q+N
Sbjct: 351 LLQAN 355

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 204 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 261 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 305
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 306 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 357
Query: 280 IYQSN 284
           + Q+N
Sbjct: 358 LLQAN 362

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 32/196 (16%)
Query: 9   KSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIM---K 65
           KS   A++++ ++   KI+      S  G+H  I +     L   T    GG V++    
Sbjct: 85  KSTAHADEKEALMSELKIM------SHLGQHENIVNL----LGACTH---GGPVLVITEY 131
Query: 66  CLFYKLYKGFLQDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIK 124
           C +  L   FL+ +  + +  ED  P  +  L   + ++A  +A+L    S+  + RD+ 
Sbjct: 132 CCYGDLLN-FLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVA 187
Query: 125 PTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG-----TFGFMAPEYRTTGDFSE 179
              ++L   +VA++ DF L+  I      +NDSN ++         +MAPE      ++ 
Sbjct: 188 ARNVLLTNGHVAKIGDFGLARDI------MNDSNYIVKGNARLPVKWMAPESIFDCVYTV 241
Query: 180 KSDVYSFGALLLELLT 195
           +SDV+S+G LL E+ +
Sbjct: 242 QSDVWSYGILLWEIFS 257

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 156 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 213 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 257
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 258 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 309
Query: 280 IYQSN 284
           + Q+N
Sbjct: 310 LLQAN 314

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 145 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 202 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 246
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 298
Query: 280 IYQSN 284
           + Q+N
Sbjct: 299 LLQAN 303

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 154 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 255
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 307
Query: 280 IYQSN 284
           + Q+N
Sbjct: 308 LLQAN 312

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 191 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 248 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 292
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 293 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 344
Query: 280 IYQSN 284
           + Q+N
Sbjct: 345 LLQAN 349

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 206 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 263 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 307
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 308 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 359
Query: 280 IYQSN 284
           + Q+N
Sbjct: 360 LLQAN 364

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE 133
           G L ++ I+  KF++    ++ K     +I S + YLH      +V RDIKP  I+L+ +
Sbjct: 131 GELFEQIINRHKFDECDAANIMK-----QILSGICYLH---KHNIVHRDIKPENILLENK 182
Query: 134 NV---AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALL 190
           N     ++ DF LS S    +  + D    +GT  ++APE      ++EK DV+S G ++
Sbjct: 183 NSLLNIKIVDFGLS-SFFSKDYKLRDR---LGTAYYIAPEV-LKKKYNEKCDVWSCGVIM 237
Query: 191 LELLTG 196
             LL G
Sbjct: 238 YILLCG 243

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 32/196 (16%)
Query: 9   KSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIM---K 65
           KS   A++++ ++   KI+      S  G+H  I +     L   T    GG V++    
Sbjct: 77  KSTAHADEKEALMSELKIM------SHLGQHENIVNL----LGACTH---GGPVLVITEY 123
Query: 66  CLFYKLYKGFLQDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIK 124
           C +  L   FL+ +  + +  ED  P  +  L   + ++A  +A+L    S+  + RD+ 
Sbjct: 124 CCYGDLLN-FLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVA 179
Query: 125 PTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG-----TFGFMAPEYRTTGDFSE 179
              ++L   +VA++ DF L+  I      +NDSN ++         +MAPE      ++ 
Sbjct: 180 ARNVLLTNGHVAKIGDFGLARDI------MNDSNYIVKGNARLPVKWMAPESIFDCVYTV 233
Query: 180 KSDVYSFGALLLELLT 195
           +SDV+S+G LL E+ +
Sbjct: 234 QSDVWSYGILLWEIFS 249

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I S + +LH    R ++ RD+KP  ++L ++   ++ D  L++ +  G+T    +    
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT GFMAPE     ++    D ++ G  L E++  +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 145 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 202 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 246
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 298
Query: 280 IYQSN 284
           + Q+N
Sbjct: 299 LLQAN 303

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I S + +LH    R ++ RD+KP  ++L ++   ++ D  L++ +  G+T    +    
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT GFMAPE     ++    D ++ G  L E++  +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +IA  +AY+     +  + RD++   +++ E  + ++ DF L+  I + E    +  +  
Sbjct: 117 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF- 172
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
               + APE    G F+ KS+V+SFG LL E++T  KI Y
Sbjct: 173 -PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY 211

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 198 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSLSIPEGETHI 154
           +I  ++ S + Y+H      +V RD+KP  I+L+ +      ++ DF LS    +  T +
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            D    IGT  ++APE    G + EK DV+S G +L  LL+G
Sbjct: 181 KDR---IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I S + +LH    R ++ RD+KP  ++L ++   ++ D  L++ +  G+T    +    
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT GFMAPE     ++    D ++ G  L E++  +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 205 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 74  GFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-- 131
           G L D  IS  +F +     V   +I  ++ S + Y H      +V RD+KP  ++L+  
Sbjct: 111 GELFDEIISRKRFSE-----VDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESK 162
Query: 132 --EENVAQLFDFTLSLSIPEGETHINDSNRV---IGTFGFMAPEYRTTGDFSEKSDVYSF 186
             + N+ ++ DF LS       TH   S +    IGT  ++APE    G + EK DV+S 
Sbjct: 163 SKDANI-RIIDFGLS-------THFEASKKXKDKIGTAYYIAPEV-LHGTYDEKCDVWST 213
Query: 187 GALLLELLTG 196
           G +L  LL+G
Sbjct: 214 GVILYILLSG 223

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I S + +LH    R ++ RD+KP  ++L ++   ++ D  L++ +  G+T    +    
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT GFMAPE     ++    D ++ G  L E++  +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 213 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSLSIPEGETHI 154
           +I  ++ S + Y+H      +V RD+KP  I+L+ +      ++ DF LS    +  T +
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            D    IGT  ++APE    G + EK DV+S G +L  LL+G
Sbjct: 181 KDR---IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 213 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 213 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 202 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 35/188 (18%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  + A+ + YL    S+  + RD+     ++ E+NV ++ DF +S    +G    + 
Sbjct: 216 LQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             R +    + APE    G +S +SDV+SFG LL E  +     Y +             
Sbjct: 273 GLRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN------------- 318
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFK----CLSESEGDRPTIVQ 272
               + N+  +E V      E+G   P  E    +C +  F+    C +   G RP+   
Sbjct: 319 ----LSNQQTREFV------EKGGRLPCPE----LCPDAVFRLMEQCWAYEPGQRPSFST 364
Query: 273 VAKQLRQI 280
           + ++L+ I
Sbjct: 365 IYQELQSI 372

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 207 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 251
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 252 -IDEEFXRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 303
Query: 280 IYQSN 284
           + Q+N
Sbjct: 304 LLQAN 308

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 206 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I     HI+   +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKK 208
Query: 160 VIG---TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++   + 
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 207 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 251
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 252 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 303
Query: 280 IYQSN 284
           + Q+N
Sbjct: 304 LLQAN 308

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +    +   + 
Sbjct: 154 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 255
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 307
Query: 280 IYQSN 284
           + Q+N
Sbjct: 308 LLQAN 312

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +    +   + 
Sbjct: 154 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 255
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 307
Query: 280 IYQSN 284
           + Q+N
Sbjct: 308 LLQAN 312

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E+   +L DF ++  + + +      N  +
Sbjct: 128 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---RNTFV 181
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
           GT  +MAPE      +  K+D++S G   +EL  G+  +   H
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 224

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +    +   + 
Sbjct: 145 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 202 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 246
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 298
Query: 280 IYQSN 284
           + Q+N
Sbjct: 299 LLQAN 303

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 114 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 169
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 170 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 227
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 228 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 265
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 266 IHQAFETMFQES 277

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 35/188 (18%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  + A+ + YL    S+  + RD+     ++ E+NV ++ DF +S    +G    + 
Sbjct: 216 LQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             R +    + APE    G +S +SDV+SFG LL E  +     Y +             
Sbjct: 273 GLRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN------------- 318
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFK----CLSESEGDRPTIVQ 272
               + N+  +E V      E+G   P  E    +C +  F+    C +   G RP+   
Sbjct: 319 ----LSNQQTREFV------EKGGRLPCPE----LCPDAVFRLMEQCWAYEPGQRPSFST 364
Query: 273 VAKQLRQI 280
           + ++L+ I
Sbjct: 365 IYQELQSI 372

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSLSIPEGETHI 154
           +I  ++ S + Y+H      +V RD+KP  I+L+ +      ++ DF LS    +  T +
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            D    IGT  ++APE    G + EK DV+S G +L  LL+G
Sbjct: 181 KDR---IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 170
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 171 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 228
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 229 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 266
Query: 273 VAKQLRQIYQ 282
           + +    ++Q
Sbjct: 267 IHQAFETMFQ 276

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 110 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 165
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 166 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 223
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 224 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 261
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 262 IHQAFETMFQES 273

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +    +   + 
Sbjct: 145 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 202 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 246
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 298
Query: 280 IYQSN 284
           + Q+N
Sbjct: 299 LLQAN 303

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 123 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 178
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 179 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 236
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 237 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 274
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 275 IHQAFETMFQES 286

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 112 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 167
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 168 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 225
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 226 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 263
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 264 IHQAFETMFQES 275

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   +N 
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +    +MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 254 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+  A+ YL    ++ ++ RD+KP  I+L E     + DF ++  +P  ET I     + 
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQI---TTMA 175
Query: 162 GTFGFMAPEY---RTTGDFSEKSDVYSFGALLLELLTGKK 198
           GT  +MAPE    R    +S   D +S G    ELL G++
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 28/190 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 170
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 171 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 228
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 229 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 266
Query: 273 VAKQLRQIYQ 282
           + +    ++Q
Sbjct: 267 IHQAFETMFQ 276

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 91  PFSVS-KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S + +L IA ++A+ +AYL     R  V RD+     ++ E  V ++ DF LS +I  
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +  D N  I    +M PE      ++ +SDV+++G +L E+ +
Sbjct: 227 ADYYKADGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           +  A+AYLH   ++ V+ RDIK  +I+L  +   +L DF     I +    +     ++G
Sbjct: 150 VLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---VPKRKXLVG 203
Query: 163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYS 202
           T  +MAPE  +   ++ + D++S G +++E++ G+   +S
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 170
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 171 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 228
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 229 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 266
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 267 IHQAFETMFQES 278

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 110 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 165
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 166 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 223
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 224 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 261
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 262 IHQAFETMFQES 273

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 112 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 167
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 168 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 225
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 226 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 263
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 264 IHQAFETMFQES 275

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 110 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 165
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 166 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 223
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 224 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 261
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 262 IHQAFETMFQES 273

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 170
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 171 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 228
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 229 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 266
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 267 IHQAFETMFQES 278

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 110 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 165
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 166 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 223
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 224 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 261
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 262 IHQAFETMFQES 273

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 108 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 163
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
               +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 164 XTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYE 221
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 222 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 259
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 260 IHQAFETMFQES 271

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 110 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 165
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 166 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 223
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 224 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 261
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 262 IHQAFETMFQES 273

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 112 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 167
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 168 YTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 225
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 226 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 263
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 264 IHQAFETMFQES 275

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 111 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 166
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 167 YTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 224
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 225 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 262
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 263 IHQAFETMFQES 274

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 178 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 108 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 163
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
               +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 164 XTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYE 221
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 222 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 259
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 260 IHQAFETMFQES 271

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 62  VIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVS 120
           VIM+ +     K +L+    ++       P S+SK+ ++A EIA  +AYL+   +   V 
Sbjct: 95  VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 151
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++ E+   ++ DF ++  I E + +     + +    +M+PE    G F+  
Sbjct: 152 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMSPESLKDGVFTTY 210
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L E+ T
Sbjct: 211 SDVWSFGVVLWEIAT 225

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 185 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 108 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 163
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
               +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 164 FTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYE 221
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 222 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 259
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 260 IHQAFETMFQES 271

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +    +   + 
Sbjct: 154 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 255
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 307
Query: 280 IYQSN 284
           + Q+N
Sbjct: 308 LLQAN 312

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 182 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +    +   + 
Sbjct: 154 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +    +MAPE      ++ +SDV+SFG LL E+ +     Y               VK 
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG-------------VK- 255
Query: 220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ 279
            I+ E  + + +   +       PE  Q +L        C       RPT  ++ + L  
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTML-------DCWHGEPSQRPTFSELVEHLGN 307
Query: 280 IYQSN 284
           + Q+N
Sbjct: 308 LLQAN 312

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 21/124 (16%)
Query: 77  QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA 136
           ++  ++V+ FED   F       A ++A  + +L     +  V RD+    +++    V 
Sbjct: 162 EEEDLNVLTFEDLLCF-------AYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVV 211
Query: 137 QLFDFTLSLSIPEGETHINDSNRVIG-----TFGFMAPEYRTTGDFSEKSDVYSFGALLL 191
           ++ DF L+  I      ++DSN V+         +MAPE    G ++ KSDV+S+G LL 
Sbjct: 212 KICDFGLARDI------MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
Query: 192 ELLT 195
           E+ +
Sbjct: 266 EIFS 269

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 184 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + + N +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +        ++    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 185 TDXXRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +        ++    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 176 TDXXRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 87  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 135
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 136 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 195
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 196 SDVWSFGVVLYELFT 210

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 213 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL    ++  + 
Sbjct: 89  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYLG---TKRYIH 137
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 198 SDVWSFGVVLYELFT 212

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 184 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 88  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 136
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 137 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 196
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 197 SDVWSFGVVLYELFT 211

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 62  VIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVS 120
           VIM+ +     K +L+    ++       P S+SK+ ++A EIA  +AYL+   +   V 
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 161
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++ E+   ++ DF ++  I E + +     + +    +M+PE    G F+  
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMSPESLKDGVFTTY 220
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L E+ T
Sbjct: 221 SDVWSFGVVLWEIAT 235

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 92  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 140
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 201 SDVWSFGVVLYELFT 215

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 94  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 142
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 143 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 202
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 203 SDVWSFGVVLYELFT 217

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHINDSNRV 160
           E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I PE     +  + +
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----SKRSEM 176
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 89  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 137
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 198 SDVWSFGVVLYELFT 212

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E +V ++ DF LS  +  G+T
Sbjct: 129 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDT 184
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 185 YTAHAGAKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVY- 241
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
             DL++K    E   E   P +                   EL   C   S  DRP+  +
Sbjct: 242 --DLLEKGYRMEQ-PEGCPPKVY------------------ELMRACWKWSPADRPSFAE 280
Query: 273 VAKQLRQIYQSN 284
             +    ++  +
Sbjct: 281 THQAFETMFHDS 292

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 89  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 137
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 198 SDVWSFGVVLYELFT 212

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL    ++  + 
Sbjct: 95  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYLG---TKRYIH 143
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 144 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 203
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 204 SDVWSFGVVLYELFT 218

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ E+   ++ DF ++  I E
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 191 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL    ++  + 
Sbjct: 120 KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYLG---TKRYIH 168
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 169 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 228
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 229 SDVWSFGVVLYELFT 243

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL    ++  + 
Sbjct: 96  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYLG---TKRYIH 144
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 145 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 204
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 205 SDVWSFGVVLYELFT 219

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   + +LH   S+ +V RD+K   I+L ++   ++ DF +      G+     +N 
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA---KTNE 178
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             GT  ++APE      ++   D +SFG LL E+L G+
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 107 KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 155
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 215
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 216 SDVWSFGVVLYELFT 230

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHINDSNRV 160
           E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I PE     +  + +
Sbjct: 125 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----SKRSXM 177
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E    +L DF ++  +   +T I   N  +
Sbjct: 127 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIK-RNXFV 180
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE      +  K+D++S G   +EL  G+
Sbjct: 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 93  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 141
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 142 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 201
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 202 SDVWSFGVVLYELFT 216

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 107 KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 155
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 215
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 216 SDVWSFGVVLYELFT 230

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI   + +LH   S+ +V RD+K   I+L ++   ++ DF +      G+     +N 
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA---KTNX 177
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             GT  ++APE      ++   D +SFG LL E+L G+
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E    +L DF ++  +   +T I   N  +
Sbjct: 112 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIK-RNXFV 165
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE      +  K+D++S G   +EL  G+
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 92  KLIMEYLPYGSLRDYLQAHAERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 140
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 201 SDVWSFGVVLYELFT 215

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHINDSNRV 160
           E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I PE     +  + +
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----SKRSXM 176
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 21/128 (16%)
Query: 85  KFEDTFP-----FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF 139
           KFED  P     F ++++ IAI+    + Y+H         RDIKP  I++      +L 
Sbjct: 167 KFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLA 217
Query: 140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELL 194
           DF   L + E  T    S+  +GT  +++PE         G +  + D +S G  + E+L
Sbjct: 218 DFGSCLKLMEDGT--VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
Query: 195 TGKKISYS 202
            G+   Y+
Sbjct: 276 YGETPFYA 283

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 118 VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDF 177
           V+ RD+KP  + L  +   +L DF L+  +   E     +   +GT  +M+PE      +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF---AKEFVGTPYYMSPEQMNRMSY 193
Query: 178 SEKSDVYSFGALLLEL 193
           +EKSD++S G LL EL
Sbjct: 194 NEKSDIWSLGCLLYEL 209

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Query: 87  EDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
           ED  P  +  L   + ++A  +A+L    S+  + RD+    ++L   +VA++ DF L+ 
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 146 SIPEGETHINDSNRVIG-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            I      +NDSN ++         +MAPE      ++ +SDV+S+G LL E+ +
Sbjct: 207 DI------MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHI 154
           +LK A++I   + YL    SR  V RD+    ++++ E+  ++ DF L+ +I  + E   
Sbjct: 116 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
              +R    F + APE      F   SDV+SFG  L ELLT
Sbjct: 173 VKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           I +A+  A  H+  +  ++ RDIKP+ I+L      +L DF +S  + +      D+   
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--- 186
Query: 161 IGTFGFMAPEY----RTTGDFSEKSDVYSFGALLLELLTGK 197
            G   +MAPE      +   +  +SDV+S G  L EL TG+
Sbjct: 187 -GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 91  PFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           P S+SK+ ++A EIA  +AYL+   +   V RD+      + E+   ++ DF ++  I E
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + +     + +    +M+PE    G F+  SDV+SFG +L E+ T
Sbjct: 178 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHINDSNRV 160
           E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I PE     +  + +
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----SKRSTM 176
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E    +L DF ++  +   +T I   N  +
Sbjct: 112 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIK-RNTFV 165
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE      +  K+D++S G   +EL  G+
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL  G  R  + 
Sbjct: 92  KLIMEFLPYGSLREYLQKHKERID--------HIKLLQYTSQICKGMEYL--GTKR-YIH 140
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+++ EN  ++ DF L+  +P+ +              + APE  T   FS  
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 201 SDVWSFGVVLYELFT 215

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 170
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
               +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 171 XTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 228
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 229 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 266
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 267 IHQAFETMFQES 278

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 111 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 166
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
               +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 167 XTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 224
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y             +   EG   PEK        EL   C   +  DRP+  +
Sbjct: 225 L--LEKDY------------RMERPEGC--PEK------VYELMRACWQWNPSDRPSFAE 262
Query: 273 VAKQLRQIYQSN 284
           + +    ++Q +
Sbjct: 263 IHQAFETMFQES 274

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           K+IM+ L Y   + +LQ     +          +  L+   +I   + YL    ++  + 
Sbjct: 90  KLIMEYLPYGSLRDYLQKHKERID--------HIKLLQYTSQICKGMEYLG---TKRYIH 138
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           R++    I+++ EN  ++ DF L+  +P+ + +            + APE  T   FS  
Sbjct: 139 RNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVA 198
Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG +L EL T
Sbjct: 199 SDVWSFGVVLYELFT 213

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHI 154
           +LK A++I   + YL    SR  V RD+    ++++ E+  ++ DF L+ +I  + E   
Sbjct: 128 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
              +R    F + APE      F   SDV+SFG  L ELLT
Sbjct: 185 VKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL--SLSIPEGETHIN 155
           K   +I + + + H   S  ++ RDIKP  I++ +  V +L DF    +L+ P GE + +
Sbjct: 128 KYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVYDD 183
Query: 156 DSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR- 212
           +    + T  + APE    GD  + +  DV++ G L+ E+  G+ + +    D  + Y  
Sbjct: 184 E----VATRWYRAPEL-LVGDVKYGKAVDVWAIGCLVTEMFMGEPL-FPGDSDIDQLYHI 237
Query: 213 ---LQDLVKKYIE----NESFKEIVDPAIVGEEGL--MWPEKEQQLLICTELAFKCLSES 263
              L +L+ ++ E    N  F  +  P I   E L   +P+  +   +  +LA KCL   
Sbjct: 238 MMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSE---VVIDLAKKCLHID 294
Query: 264 EGDRP 268
              RP
Sbjct: 295 PDKRP 299

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  + +IA  +A++     R  + RD++   I++    V ++ DF L+            
Sbjct: 281 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA------------ 325
Query: 157 SNRVIGTFG--FMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             RV   F   + APE    G F+ KSDV+SFG LL+E++T  +I Y
Sbjct: 326 --RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 111 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 165
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 216

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E    +L DF ++  +   +T I   N  +
Sbjct: 132 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIK-RNTFV 185
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           GT  +MAPE      +  K+D++S G   +EL  G+
Sbjct: 186 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  + ++A  +A+L    S+  + RD+    ++L   +VA++ DF L+  I      +ND
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MND 219
Query: 157 SNRVIG-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           SN ++         +MAPE      ++ +SDV+S+G LL E+ +
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++YLH   ++ V+ RDIK  +I+L  +   +L DF     +      +    
Sbjct: 146 VCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV---SKEVPKRK 199
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 200 XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  + ++A  +A+L    S+  + RD+    ++L   +VA++ DF L+  I      +ND
Sbjct: 167 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MND 217
Query: 157 SNRVIG-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           SN ++         +MAPE      ++ +SDV+S+G LL E+ +
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-- 159
           E+   + YLH       + RD+K   I+L E+   Q+ DF +S  +  G     +  R  
Sbjct: 129 EVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 160 VIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTG 196
            +GT  +MAPE       +  K+D++SFG   +EL TG
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  + ++A  +A+L    S+  + RD+    ++L   +VA++ DF L+  I      +ND
Sbjct: 167 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MND 217
Query: 157 SNRVIG-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           SN ++         +MAPE      ++ +SDV+S+G LL E+ +
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSXQEY 217

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-- 159
           E+   + YLH       + RD+K   I+L E+   Q+ DF +S  +  G     +  R  
Sbjct: 124 EVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 160 VIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTG 196
            +GT  +MAPE       +  K+D++SFG   +EL TG
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KIA+ I  A+ +LH   S  V+ RD+KP+ +++      ++ DF +S  + +      D+
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 158 NRVIGTFGFMAPEY----RTTGDFSEKSDVYSFGALLLEL 193
               G   +MAPE          +S KSD++S G  ++EL
Sbjct: 215 ----GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +  G+T
Sbjct: 110 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 165
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           +   +        + APE      FS KSDV++FG LL E+ T
Sbjct: 166 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 113 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 167
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 218

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 126 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 182
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             +      + +PE  +   +S KSDV+SFG L+ E+ +  KI Y               
Sbjct: 183 GTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------- 225
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                EN S  E+V+    G   L  P      +   ++   C  E   DRP   ++ +Q
Sbjct: 226 -----ENRSNSEVVEDISTGFR-LYKPRLASTHVY--QIMNHCWKERPEDRPAFSRLLRQ 277
Query: 277 LRQIYQSN 284
           L +I +S 
Sbjct: 278 LAEIAESG 285

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 109 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             +      + +PE  +   +S KSDV+SFG L+ E+ +  KI Y               
Sbjct: 166 GTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------- 208
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                EN S  E+V+    G   L  P      +   ++   C  E   DRP   ++ +Q
Sbjct: 209 -----ENRSNSEVVEDISTGFR-LYKPRLASTHVY--QIMNHCWRERPEDRPAFSRLLRQ 260
Query: 277 LRQIYQSN 284
           L +I +S 
Sbjct: 261 LAEIAESG 268

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 102 EIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           ++ + V YLH +G    +  RDIKP  ++L E +  ++ DF L+ ++          N++
Sbjct: 112 QLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKM 166
Query: 161 IGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            GT  ++APE     +F +E  DV+S G +L  +L G ++ +    D  ++Y
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEY 217

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 106 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             +      + +PE  +   +S KSDV+SFG L+ E+ +  KI Y               
Sbjct: 163 GTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------- 205
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                EN S  E+V+    G   L  P      +   ++   C  E   DRP   ++ +Q
Sbjct: 206 -----ENRSNSEVVEDISTGFR-LYKPRLASTHVY--QIMNHCWKERPEDRPAFSRLLRQ 257
Query: 277 LRQIYQSN 284
           L +I +S 
Sbjct: 258 LAEIAESG 265

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           I   +  AV++LH      +V RD+KP  I+L +    +L DF  S  +  GE       
Sbjct: 205 IMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK----LR 257
Query: 159 RVIGTFGFMAPEY------RTTGDFSEKSDVYSFGALLLELLTG 196
            + GT G++APE        T   + ++ D+++ G +L  LL G
Sbjct: 258 ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 107 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             +      + +PE  +   +S KSDV+SFG L+ E+ +  KI Y               
Sbjct: 164 GTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------- 206
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                EN S  E+V+    G   L  P      +   ++   C  E   DRP   ++ +Q
Sbjct: 207 -----ENRSNSEVVEDISTGFR-LYKPRLASTHVY--QIMNHCWRERPEDRPAFSRLLRQ 258
Query: 277 LRQIYQSN 284
           L +I +S 
Sbjct: 259 LAEIAESG 266

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 104 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             +      + +PE  +   +S KSDV+SFG L+ E+ +  KI Y               
Sbjct: 161 GTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------- 203
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                EN S  E+V+    G   L  P      +   ++   C  E   DRP   ++ +Q
Sbjct: 204 -----ENRSNSEVVEDISTGFR-LYKPRLASTHVY--QIMNHCWKERPEDRPAFSRLLRQ 255
Query: 277 LRQIYQSN 284
           L +I +S 
Sbjct: 256 LAEIAESG 263

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A A+ Y H    R V+ RDIKP  +++  +   ++ DF  S+  P           + 
Sbjct: 123 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-----RRXMC 174
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  ++ PE        EK D++  G L  E L G
Sbjct: 175 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A A+ Y H    R V+ RDIKP  +++  +   ++ DF  S+  P           + 
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-----RRXMC 173
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  ++ PE        EK D++  G L  E L G
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + R++     ++ E ++ ++ DF LS  +  G+T
Sbjct: 317 AVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDT 372
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 373 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 430
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 431 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 468
Query: 273 VAKQLRQIYQ 282
           + +    ++Q
Sbjct: 469 IHQAFETMFQ 478

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET 152
           +V  L +A +I+SA+ YL     +  + R++     ++ E ++ ++ DF LS  +  G+T
Sbjct: 356 AVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDT 411
Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
           +   +        + APE      FS KSDV++FG LL E+ T     Y    D  + Y 
Sbjct: 412 YTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYE 469
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           L  L K Y        +  P     EG   PEK        EL   C   +  DRP+  +
Sbjct: 470 L--LEKDY-------RMERP-----EGC--PEK------VYELMRACWQWNPSDRPSFAE 507
Query: 273 VAKQLRQIYQ 282
           + +    ++Q
Sbjct: 508 IHQAFETMFQ 517

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           EI   + YLH   S   + RDIK   ++L E+   +L DF ++  +   +T I   N  +
Sbjct: 124 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIK-RNXFV 177
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
           GT  +MAPE      +  K+D++S G   +EL  G+  +   H
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 220

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVA--QLFDFTLSLSIPEGETHINDSN 158
           +I  A+ Y H      ++ RD+KP  ++L  +EN A  +L DF +++ +  GE+ +    
Sbjct: 138 QILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGG 192
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           RV GT  FMAPE      + +  DV+  G +L  LL+G
Sbjct: 193 RV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 96  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 152
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++  +   ++ DF ++  I E + +     + +    +MAPE    G F+  
Sbjct: 153 RDLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMAPESLKDGVFTTS 211
Query: 181 SDVYSFGALLLELLT 195
           SD++SFG +L E+ +
Sbjct: 212 SDMWSFGVVLWEITS 226

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 118 VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDF 177
           V+ RD+KP  + L  +   +L DF L+  I   +T    +   +GT  +M+PE      +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSF--AKTFVGTPYYMSPEQMNRMSY 193
Query: 178 SEKSDVYSFGALLLEL 193
           +EKSD++S G LL EL
Sbjct: 194 NEKSDIWSLGCLLYEL 209

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 118 VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDF 177
           V+ RD+KP  + L  +   +L DF L+  I   +T    +   +GT  +M+PE      +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSF--AKAFVGTPYYMSPEQMNRMSY 193
Query: 178 SEKSDVYSFGALLLEL 193
           +EKSD++S G LL EL
Sbjct: 194 NEKSDIWSLGCLLYEL 209

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI-PEGETHINDSNRV 160
           E   A+ +LH   S  V+ R+IK   I+L  +   +L DF     I PE     +  + +
Sbjct: 125 ECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ----SKRSTM 177
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + YL    SR  V RD+    I+++ E   ++ DF L+  +P  + +        
Sbjct: 122 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT--GKKISYSSHFDD--GEDYRLQDLV 217
               + APE  +   FS +SDV+SFG +L EL T   K  S S+ F    G +  +  L 
Sbjct: 179 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALS 238
Query: 218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL 277
           +     E  + +  P     E               EL   C + S  DRP+   +  QL
Sbjct: 239 RLLELLEEGQRLPAPPACPAE-------------VHELMKLCWAPSPQDRPSFSALGPQL 285
Query: 278 RQIYQSN 284
             ++  +
Sbjct: 286 DMLWSGS 292

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + YL    SR  V RD+    I+++ E   ++ DF L+  +P  + +        
Sbjct: 123 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT--GKKISYSSHFDD--GEDYRLQDLV 217
               + APE  +   FS +SDV+SFG +L EL T   K  S S+ F    G +  +  L 
Sbjct: 180 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALC 239
Query: 218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL 277
           +     E  + +  P     E               EL   C + S  DRP+   +  QL
Sbjct: 240 RLLELLEEGQRLPAPPACPAE-------------VHELMKLCWAPSPQDRPSFSALGPQL 286
Query: 278 RQIYQSN 284
             ++  +
Sbjct: 287 DMLWSGS 293

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 94  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 150
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++  +   ++ DF ++  I E +        ++    +MAPE    G F+  
Sbjct: 151 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTS 209
Query: 181 SDVYSFGALLLELLTGKKISY 201
           SD++SFG +L E+ +  +  Y
Sbjct: 210 SDMWSFGVVLWEITSLAEQPY 230

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 94  VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--------- 144
           V K  +  ++   + YLH G    ++ RD+KP+ I+L  E   ++ DF LS         
Sbjct: 109 VHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV 165
Query: 145 -----LSIPEGETHINDSNRV----IGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELL 194
                LSI E   + +D   +    + T  + APE    +  +++  D++S G +L E+L
Sbjct: 166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
Query: 195 TGKKI 199
            GK I
Sbjct: 226 CGKPI 230

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 30/192 (15%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + YL    SR  V RD+    I+++ E   ++ DF L+  +P     ++    V+
Sbjct: 119 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP-----LDKDXXVV 170
Query: 162 GTFG-----FMAPEYRTTGDFSEKSDVYSFGALLLELLT--GKKISYSSHFDD--GEDYR 212
              G     + APE  +   FS +SDV+SFG +L EL T   K  S S+ F    G +  
Sbjct: 171 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 230
Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
           +  L +     E  + +  P     E               EL   C + S  DRP+   
Sbjct: 231 VPALCRLLELLEEGQRLPAPPACPAE-------------VHELMKLCWAPSPQDRPSFSA 277
Query: 273 VAKQLRQIYQSN 284
           +  QL  ++  +
Sbjct: 278 LGPQLDMLWSGS 289

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 93  SVSKLKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSI 147
           +VS L+I + IAS +A+LH+       +P ++ RD+K   I++++     + D  L++  
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163
Query: 148 PEGETHIN-DSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLEL 193
            +    ++  +N  +GT  +MAPE           D  ++ D+++FG +L E+
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 97  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++  +   ++ DF ++  I E +        ++    +MAPE    G F+  
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTS 212
Query: 181 SDVYSFGALLLELLTGKKISY 201
           SD++SFG +L E+ +  +  Y
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY 233

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 97  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++  +   ++ DF ++  I E +        ++    +MAPE    G F+  
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTS 212
Query: 181 SDVYSFGALLLELLTGKKISY 201
           SD++SFG +L E+ +  +  Y
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY 233

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L   +  ++ DF L+        H       +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 237

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 154 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 211 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 157 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 214 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 152 QLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 209 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 93  SVSKLKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSI 147
           +VS L+I + IAS +A+LH+       +P ++ RD+K   I++++     + D  L++  
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163
Query: 148 PEGETHIN-DSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLEL 193
            +    ++  +N  +GT  +MAPE           D  ++ D+++FG +L E+
Sbjct: 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KIA+ I  A+ +LH   S  V+ RD+KP+ +++      ++ DF +S  +      ++D 
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL------VDDV 164
Query: 158 NRVI--GTFGFMAPEY----RTTGDFSEKSDVYSFGALLLEL 193
            + I  G   +MAPE          +S KSD++S G  ++EL
Sbjct: 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           I  EI   +++LH      V+ RDIK   ++L E    +L DF +S  +   +  +   N
Sbjct: 134 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRN 187
Query: 159 RVIGTFGFMAPEY-------RTTGDFSEKSDVYSFGALLLELLTG 196
             IGT  +MAPE          T DF  KSD++S G   +E+  G
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDF--KSDLWSLGITAIEMAEG 230

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 97  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++  +   ++ DF ++  I E + +     + +    +MAPE    G F+  
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 181 SDVYSFGALLLELLTGKKISY 201
           SD++SFG +L E+ +  +  Y
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY 233

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 93  SVSKLKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSI 147
           +VS L+I + IAS +A+LH+       +P ++ RD+K   I++++     + D  L++  
Sbjct: 133 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 192
Query: 148 PEGETHIN-DSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKIS 200
            +    ++  +N  +GT  +MAPE           D  ++ D+++FG +L E+   +++ 
Sbjct: 193 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 250
Query: 201 YSSHFDDGEDYR--LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEK---EQQLLICTEL 255
            +      EDY+    D+V     + SF+++     V ++    P +   +  L    +L
Sbjct: 251 SNGIV---EDYKPPFYDVVPN---DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKL 304
Query: 256 AFKCLSESEGDRPTIVQVAKQLRQI 280
             +C  ++   R T +++ K L +I
Sbjct: 305 MKECWYQNPSARLTALRIKKTLTKI 329

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHINDSN 158
           +I  ++AY H   S  +V R++KP  ++L  +      +L DF L++ + + E      +
Sbjct: 136 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW----H 188
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT G+++PE      +S+  D+++ G +L  LL G    Y   +D+ + +RL   +K
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG----YPPFWDE-DQHRLYAQIK 243

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           +I  A+ Y H      ++ RD+KP  ++L  +EN A +      ++I  GE+ +    RV
Sbjct: 140 QILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV 196
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            GT  FMAPE      + +  DV+  G +L  LL+G
Sbjct: 197 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHINDSN 158
           +I  ++AY H   S  +V R++KP  ++L  +      +L DF L++ + + E      +
Sbjct: 113 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA----WH 165
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT G+++PE      +S+  D+++ G +L  LL G    Y   +D+ + +RL   +K
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG----YPPFWDE-DQHRLYAQIK 220

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 21/128 (16%)
Query: 85  KFEDTFP-----FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF 139
           KFED  P     F + ++ +AI+    + Y+H         RDIKP  ++L      +L 
Sbjct: 167 KFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLA 217
Query: 140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELL 194
           DF   L + +  T    S+  +GT  +++PE         G +  + D +S G  + E+L
Sbjct: 218 DFGSCLKMNDDGT--VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275
Query: 195 TGKKISYS 202
            G+   Y+
Sbjct: 276 YGETPFYA 283

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E++  ++ DF L+        H +D     
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGY 188
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E++  ++ DF L+        H +D     
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGY 184
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           +I  A+ Y H      ++ RD+KP  ++L  +EN A +      ++I  GE+ +    RV
Sbjct: 138 QILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV 194
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            GT  FMAPE      + +  DV+  G +L  LL+G
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   S+ +   D+KP  I+L ++NV     +L DF ++  I  G    N+ 
Sbjct: 123 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEF 175
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 21/128 (16%)
Query: 85  KFEDTFP-----FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF 139
           KFED  P     F + ++ +AI+    + Y+H         RDIKP  ++L      +L 
Sbjct: 183 KFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLA 233
Query: 140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELL 194
           DF   L + +  T    S+  +GT  +++PE         G +  + D +S G  + E+L
Sbjct: 234 DFGSCLKMNDDGT--VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291
Query: 195 TGKKISYS 202
            G+   Y+
Sbjct: 292 YGETPFYA 299

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHINDSN 158
           +I  ++AY H   S  +V R++KP  ++L  +      +L DF L++ + + E      +
Sbjct: 112 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA----WH 164
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT G+++PE      +S+  D+++ G +L  LL G    Y   +D+ + +RL   +K
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG----YPPFWDE-DQHRLYAQIK 219

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 28/188 (14%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 106 LGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
             +      + +PE  +   +S KSDV+SFG L+ E+ +  KI Y               
Sbjct: 163 GTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------- 205
Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                EN S  E+V+    G   L  P      +   ++   C  E   DRP   ++ +Q
Sbjct: 206 -----ENRSNSEVVEDISTGFR-LYKPRLASTHVY--QIMNHCWKERPEDRPAFSRLLRQ 257
Query: 277 LRQIYQSN 284
           L  I  S 
Sbjct: 258 LAAIAASG 265

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHINDSN 158
           +I  ++AY H   S  +V R++KP  ++L  +      +L DF L++ + + E      +
Sbjct: 113 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA----WH 165
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT G+++PE      +S+  D+++ G +L  LL G    Y   +D+ + +RL   +K
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG----YPPFWDE-DQHRLYAQIK 220

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 97  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+     ++  +   ++ DF ++  I E   +     + +    +MAPE    G F+  
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIYE-TAYYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 181 SDVYSFGALLLELLT 195
           SD++SFG +L E+ +
Sbjct: 213 SDMWSFGVVLWEITS 227

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   S+ +   D+KP  I+L ++NV     +L DF ++  I  G    N+ 
Sbjct: 137 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEF 189
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   S+ +   D+KP  I+L ++NV     +L DF ++  I  G    N+ 
Sbjct: 116 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEF 168
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 139 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 131 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 187
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 188 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 137 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 193
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 99  IAIEIASAVAYLH-VGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHI 154
           I  ++ SAV+++H VG    VV RD+KP  ++  +EN     ++ DF  +   P     +
Sbjct: 111 IMRKLVSAVSHMHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166
Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
                   T  + APE      + E  D++S G +L  +L+G ++ + SH
Sbjct: 167 KTP---CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG-QVPFQSH 212

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 235

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 138 GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 194
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 139 GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 134 GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 235

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 136 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 192
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 157 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 213
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 214 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + YL    SR  V RD+    I+++ E   ++ DF L+  +P  + +        
Sbjct: 135 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT--GKKISYSSHFDD--GEDYRLQDLV 217
               + APE  +   FS +SDV+SFG +L EL T   K  S S+ F    G +  +  L 
Sbjct: 192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251
Query: 218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL 277
           +     E  + +  P     E               EL   C + S  DRP+   +  QL
Sbjct: 252 RLLELLEEGQRLPAPPACPAE-------------VHELMKLCWAPSPQDRPSFSALGPQL 298
Query: 278 RQIYQSN 284
             ++  +
Sbjct: 299 DMLWSGS 305

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 235

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 233

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 233

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   + +   +N  +
Sbjct: 211 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 268 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E + +++  
Sbjct: 158 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 214
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 215 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 140 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 243

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 235

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 237

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 237

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 240

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 193
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 138 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 241

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 129 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 232

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I SAV Y H      VV RD+KP  ++L     A++ DF LS  + +GE  + DS    
Sbjct: 119 QILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRDS---C 171
Query: 162 GTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTG 196
           G+  + APE  +   ++  + D++S G +L  LL G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   +     +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 235

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 109 YLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMA 168
           YLH  F R +  RDIK   I+L  E  A+L DF ++  + +    +   N VIGT  +MA
Sbjct: 140 YLH--FMRKI-HRDIKAGNILLNTEGHAKLADFGVAGQLTD---XMAKRNXVIGTPFWMA 193
Query: 169 PEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           PE      ++  +D++S G   +E+  GK
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  + YL    S+  + RD+    +++ E NV ++ DF L+  I   +     +N  +
Sbjct: 165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
               +MAPE      ++ +SDV+SFG L+ E+ T
Sbjct: 222 -PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++ LH   ++ V+ RDIK  +I+L  +   +L DF     +      +    
Sbjct: 175 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRK 228
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 229 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 239

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  V+ RD+KP+ ++L      ++ DF L+        H       +
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 162 GTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
            T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 240

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 187
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 187
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 189 SKSDVWSFGVLMWEAFS 205

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           +++I  A+AYL    S   V RDI    I++      +L DF LS  I + + +     R
Sbjct: 119 SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 175
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVK 218
           +     +M+PE      F+  SDV+ F   + E+L+ GK+  +                 
Sbjct: 176 L--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF----------------- 216
Query: 219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR 278
            ++EN   K+++    V E+G   P+ +    +   L  +C      DRP   ++   L 
Sbjct: 217 -WLEN---KDVIG---VLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269
Query: 279 QIYQ 282
            +YQ
Sbjct: 270 DVYQ 273

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 187 SKSDVWSFGVLMWEAFS 203

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 193 SKSDVWSFGVLMWEAFS 209

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           +++I  A+AYL    S   V RDI    I++      +L DF LS  I + + +     R
Sbjct: 131 SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 187
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVK 218
           +     +M+PE      F+  SDV+ F   + E+L+ GK+  +                 
Sbjct: 188 L--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF----------------- 228
Query: 219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR 278
            ++EN   K+++    V E+G   P+ +    +   L  +C      DRP   ++   L 
Sbjct: 229 -WLEN---KDVIG---VLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 281
Query: 279 QIYQ 282
            +YQ
Sbjct: 282 DVYQ 285

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E++  ++ DF L         H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 199 SKSDVWSFGVLMWEAFS 215

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++ LH   ++ V+ RDIK  +I+L  +   +L DF     +      +    
Sbjct: 121 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRK 174
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 175 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           +++I  A+AYL    S   V RDI    I++      +L DF LS  I + + +     R
Sbjct: 115 SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 171
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVK 218
           +     +M+PE      F+  SDV+ F   + E+L+ GK+  +                 
Sbjct: 172 L--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF----------------- 212
Query: 219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLR 278
            ++EN   K+++    V E+G   P+ +    +   L  +C      DRP   ++   L 
Sbjct: 213 -WLEN---KDVIG---VLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 265
Query: 279 QIYQ 282
            +YQ
Sbjct: 266 DVYQ 269

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++ LH   ++ V+ RDIK  +I+L  +   +L DF     +      +    
Sbjct: 125 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRK 178
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 179 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 207 SKSDVWSFGVLMWEAFS 223

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++ LH   ++ V+ RDIK  +I+L  +   +L DF     +      +    
Sbjct: 130 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRK 183
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 184 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++ LH   ++ V+ RDIK  +I+L  +   +L DF     +      +    
Sbjct: 132 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRK 185
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 186 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + + +  A++ LH   ++ V+ RDIK  +I+L  +   +L DF     +      +    
Sbjct: 252 VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRK 305
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   +  + D++S G +++E++ G+
Sbjct: 306 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 193
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 209 SKSDVWSFGVLMWEAFS 225

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 209 SKSDVWSFGVLMWEAFS 225

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 205
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 80  PISVMKFEDTFPFSVSK---LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA 136
           P +V+  E   P  +++   L IA +IA+ + YL    S+  V RD+     ++ E  + 
Sbjct: 111 PDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLV 167
Query: 137 QLFDFTLSLSIPEGETHINDSNRVIG----TFGFMAPEYRTTGDFSEKSDVYSFGALLLE 192
           ++ DF +S  +     +  D  RV G       +M PE      F+ +SDV+S G +L E
Sbjct: 168 KIGDFGMSRDV-----YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
Query: 193 LLT-GKKISYS 202
           + T GK+  Y 
Sbjct: 223 IFTYGKQPWYQ 233

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 201
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 143 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 192
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-INDSN 158
            +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 138 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT 194
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 189
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 202
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 187
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 188
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 202
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 132 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 181
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGX 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 188
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 187
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 201
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-V 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGX 202
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 188
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A EI SA+ +LH    + ++ RD+K   ++L  E   +L DF +     EG  +   +  
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC---KEGICNGVTTAT 183
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
             GT  ++APE      +    D ++ G LL E+L G     + + DD
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 179
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 179
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 131 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 180
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 22/104 (21%)
Query: 101 IEIAS-------AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGET 152
           +EIA+        +AYLH   S  ++ RD+K   I+L E  + +L DF + S+  P    
Sbjct: 115 VEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 167
Query: 153 HINDSNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLEL 193
               +N  +GT  +MAPE       G +  K DV+S G   +EL
Sbjct: 168 ----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-V 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 22/104 (21%)
Query: 101 IEIAS-------AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF-TLSLSIPEGET 152
           +EIA+        +AYLH   S  ++ RD+K   I+L E  + +L DF + S+  P    
Sbjct: 154 VEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 206
Query: 153 HINDSNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLEL 193
               +N  +GT  +MAPE       G +  K DV+S G   +EL
Sbjct: 207 ----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 98  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 154
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           R++     ++  +   ++ DF ++  I E + +     + +    +MAPE    G F+  
Sbjct: 155 RNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMAPESLKDGVFTTS 213
Query: 181 SDVYSFGALLLELLT 195
           SD++SFG +L E+ +
Sbjct: 214 SDMWSFGVVLWEITS 228

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-V 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGY 205
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 21/108 (19%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL--------------SLSI 147
           +I  A++Y+H   S+ ++ RD+KP  I + E    ++ DF L              S ++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 148 PEGETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELL 194
           P    ++  +   IGT  ++A E    TG ++EK D+YS G +  E++
Sbjct: 181 PGSSDNLTSA---IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-V 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 21/108 (19%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL--------------SLSI 147
           +I  A++Y+H   S+ ++ RD+KP  I + E    ++ DF L              S ++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 148 PEGETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELL 194
           P    ++  +   IGT  ++A E    TG ++EK D+YS G +  E++
Sbjct: 181 PGSSDNLTSA---IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+A A+ Y H    + V+ RDIKP  ++L  +   ++ DF  S+  P           + 
Sbjct: 131 ELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR-----RKTMC 182
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           GT  ++ PE       +EK D++  G L  ELL G
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 552 SKSDVWSFGVLMWEAFS 568

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 62  VIMKCLFYKLYKGFLQD-RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVS 120
           V+M+ + +   K +L+  RP +        P     +++A EIA  +AYL+   ++  V 
Sbjct: 97  VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           R++     ++  +   ++ DF ++  I E + +     + +    +MAPE    G F+  
Sbjct: 154 RNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 181 SDVYSFGALLLELLT 195
           SD++SFG +L E+ +
Sbjct: 213 SDMWSFGVVLWEITS 227

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E +            + APE      FS
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 551 SKSDVWSFGVLMWEAFS 567

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  +A+L    S+  + RD+    I+L    + ++ DF L+  I       NDSN V+
Sbjct: 169 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIK------NDSNYVV 219
Query: 162 G-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
                    +MAPE      ++ +SDV+S+G  L EL +     Y     D + Y++
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 276

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-V 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 178
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +  ++   + Y+H   S  ++ RD+KP+ + + E++  ++ DF L+    E  T      
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG----- 187
Query: 159 RVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
             + T  + APE       +++  D++S G ++ ELL GK +   S + D
Sbjct: 188 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSIPEGETHINDSN 158
           ++ +A+AY H   S+ VV +D+KP  I+ Q+    +  ++ DF L+      E   N + 
Sbjct: 132 QMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA- 187
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
              GT  +MAPE     D + K D++S G ++  LLTG
Sbjct: 188 ---GTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTG 221

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  +A+L    S+  + RD+    I+L    + ++ DF L+  I       NDSN V+
Sbjct: 171 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIK------NDSNYVV 221
Query: 162 G-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
                    +MAPE      ++ +SDV+S+G  L EL +     Y     D + Y++
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 278

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  +A+L    S+  + RD+    I+L    + ++ DF L+  I       NDSN V+
Sbjct: 176 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIK------NDSNYVV 226
Query: 162 G-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
                    +MAPE      ++ +SDV+S+G  L EL +     Y     D + Y++
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHIN 155
           I  ++ S   YLH      +V RD+KP  ++L+ ++   + ++ DF LS     G     
Sbjct: 109 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----G 161
Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
                +GT  ++APE      + EK DV+S G +L  LL G
Sbjct: 162 KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCG 201

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 120 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 175
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 176 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 172
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 173 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++   + +LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T+   +  V+
Sbjct: 132 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPYVV 185
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ EL+ G  I   + H D              
Sbjct: 186 TRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 244
Query: 212 ----RLQDLVKKYIEN 223
                LQ  V+ Y+EN
Sbjct: 245 EFMAALQPTVRNYVEN 260

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS        ++ DS  
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS-------RYMEDSTX 166
Query: 160 VIGTFG-----FMAPEYRTTGDFSEKSDVYSFGALLLELL 194
              + G     +MAPE      F+  SDV+ FG  + E+L
Sbjct: 167 XKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L  ++ A++ DF LS ++   E              + APE      FS
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 179 EKSDVYSFGALLLELLT 195
            KSDV+SFG L+ E  +
Sbjct: 193 SKSDVWSFGVLMWEAFS 209

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +  ++   + Y+H   S  ++ RD+KP+ + + E++  ++ DF L+    E  T      
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG----- 187
Query: 159 RVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
             + T  + APE       +++  D++S G ++ ELL GK +   S + D
Sbjct: 188 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 172
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 173 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHIN 155
           I  ++ S   YLH      +V RD+KP  ++L+ ++   + ++ DF LS     G     
Sbjct: 126 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG----G 178
Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
                +GT  ++APE      + EK DV+S G +L  LL G
Sbjct: 179 KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCG 218

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-LSIPEGETHINDSNRV 160
           +I   + Y+H   S  V+ RD+KP+ +++      ++ DF L+ ++ PE + H       
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHD-HTGFLTEX 207
Query: 161 IGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
           + T  + APE    +  +++  D++S G +L E+L+ + I    H+ D
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  +A+L    S+  + RD+    I+L    + ++ DF L+  I       NDSN V+
Sbjct: 176 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIK------NDSNYVV 226
Query: 162 G-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
                    +MAPE      ++ +SDV+S+G  L EL +     Y     D + Y++
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 114 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 169
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 170 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 122 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 177
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 178 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   ++ +   D+KP  I+L ++N+     +L DF L+  I +G    N  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-- 177
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++A  +A+L    S+  + RD+    I+L    + ++ DF L+  I       NDSN V+
Sbjct: 153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIK------NDSNYVV 203
Query: 162 G-----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
                    +MAPE      ++ +SDV+S+G  L EL +     Y     D + Y++
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 119 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 174
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 175 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+    +  T        +
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT------GYV 190
Query: 162 GTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
            T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+    +  T        +
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT------GYV 190
Query: 162 GTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
            T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 145 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 200
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 201 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+    +  T        +
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT------GYV 190
Query: 162 GTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
            T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   ++ +   D+KP  I+L ++N+     +L DF L+  I +G    N  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-- 177
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND--- 156
           A EI+  + +LH    R ++ RD+K   ++L  E   ++ DF +       + H+ D   
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMC------KEHMMDGVT 176
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +    GT  ++APE      + +  D +++G LL E+L G+
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ D+ L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   ++ +   D+KP  I+L ++N+     +L DF L+  I +G    N  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-- 177
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   ++ +   D+KP  I+L ++N+     +L DF L+  I +G    N  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-- 177
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   ++ +   D+KP  I+L ++N+     +L DF L+  I +G    N  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-- 177
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 497 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKG 552
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 553 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA----QLFDFTLSLSIPEGETHINDS 157
           +I   V YLH   ++ +   D+KP  I+L ++N+     +L DF L+  I +G    N  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN-- 177
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L IA +IAS + YL    S+  V RD+     ++    + ++ DF +S  +     +  D
Sbjct: 136 LHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV-----YSTD 187
Query: 157 SNRVIG----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
             RV G       +M PE      F+ +SDV+SFG +L E+ T
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKG 172
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 173 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +  ++   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+    E  T      
Sbjct: 128 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTG----- 179
Query: 159 RVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
             + T  + APE       +++  D++S G ++ ELL GK +   S + D
Sbjct: 180 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 228

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E   + 
Sbjct: 108 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR 164
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            ++      +  PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 165 GSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF L+  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E    +
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----E 175
Query: 157 SNRVIGTFG--FMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
           ++ V   F   +  PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 75  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLCQVIQMELDHERMSYLLY 133
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T    +  V+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPEVV 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 EFMKKLQPTVRTYVEN 262

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 173
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL-SIPEGETHINDSN 158
           A EIA  + +L    S+ ++ RD+K   ++L  E   ++ DF +   +I +G T    + 
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT----TK 179
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
              GT  ++APE      + +  D ++FG LL E+L G+
Sbjct: 180 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 173
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 91  PFSV---SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI 147
           PF++   + ++  ++IA  + YL    SR  + RD+     +L E+    + DF LS  I
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI 187
Query: 148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
             G+ +       +    ++A E      ++  SDV++FG  + E++T  +  Y+     
Sbjct: 188 YSGDYYRQGCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG---- 242
Query: 208 GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR 267
                        IEN    EI +  I G      PE  +++    +L ++C S     R
Sbjct: 243 -------------IEN---AEIYNYLIGGNRLKQPPECMEEVY---DLMYQCWSADPKQR 283
Query: 268 PTIVQVAKQLRQI 280
           P+   +  +L  I
Sbjct: 284 PSFTCLRMELENI 296

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL-SIPEGETHINDSN 158
           A EIA  + +L    S+ ++ RD+K   ++L  E   ++ DF +   +I +G T    + 
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT----TK 500
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
              GT  ++APE      + +  D ++FG LL E+L G+
Sbjct: 501 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++   + YLH    + ++ RDIKP+ +++ E+   ++ DF +S      +  ++++   +
Sbjct: 145 DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT---V 198
Query: 162 GTFGFMAPE--YRTTGDFSEKS-DVYSFGALL--------------LELLTGKKISYSSH 204
           GT  FMAPE    T   FS K+ DV++ G  L              +  L  K  S +  
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALE 258
Query: 205 FDDGEDYR--LQDLVKKYIENESFKEIVDPAI 234
           F D  D    L+DL+ + ++      IV P I
Sbjct: 259 FPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + E  T+   S  
Sbjct: 497 AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKG 552
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
            +    +MAPE      F+  SDV+ FG  + E+L
Sbjct: 553 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+        H +D     
Sbjct: 162 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 211
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       ++   D++S G ++ ELLTG+ +
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDS 157
           +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G    N+ 
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEF 174
Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             + GT  F+APE         ++D++S G +   LL+G
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 97  LKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSIPEGE 151
           +K+A+  AS +A+LH+       +P ++ RD+K   I++++     + D  L++      
Sbjct: 106 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 165
Query: 152 THINDS-NRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSH 204
             I+ + N  +GT  +MAPE           +  +++D+Y+ G +  E+   ++ S    
Sbjct: 166 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGI 223
Query: 205 FDDGEDYRLQ--DLVKKYIENESFKEIV-----DPAIVGEEGLMWPEKEQQ---LLICTE 254
               EDY+L   DLV      E  +++V      P I        P + Q    L +  +
Sbjct: 224 H---EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI--------PNRWQSCEALRVMAK 272
Query: 255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
           +  +C   +   R T +++ K L Q+ Q
Sbjct: 273 IMRECWYANGAARLTALRIKKTLSQLSQ 300

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 76  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLCQVIQMELDHERMSYLLY 134
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T    +  V+
Sbjct: 135 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVV 188
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 189 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 247
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 248 EFMKKLQPTVRTYVEN 263

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 101 IEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV 160
           +EI  A++YLH   S  +V  D+KP  I+L EE + +L D           + IN    +
Sbjct: 189 LEILPALSYLH---SIGLVYNDLKPENIMLTEEQL-KLIDLG-------AVSRINSFGYL 237
Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFG----ALLLELLT 195
            GT GF APE   TG  +  +D+Y+ G    AL L+L T
Sbjct: 238 YGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPT 275

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ E+   Q+ DF  +  + +G T       
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTW-----X 184
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 121 RDIKPTTIVLQEENVAQLFDFTL-SLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSE 179
           RD+KP  I++  ++ A L DF + S +  E  T + ++   +GT  + APE  +    + 
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT---VGTLYYXAPERFSESHATY 214
Query: 180 KSDVYSFGALLLELLTG 196
           ++D+Y+   +L E LTG
Sbjct: 215 RADIYALTCVLYECLTG 231

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           E+  A+  +H   S  ++ RD+KP  ++L +    +L DF   + +   ET +   +  +
Sbjct: 182 EVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAV 236
Query: 162 GTFGFMAPEYRTT----GDFSEKSDVYSFGALLLELLTGKKISYS 202
           GT  +++PE   +    G +  + D +S G  L E+L G    Y+
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 281

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 97  LKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSIPEGE 151
           +K+A+  AS +A+LH+       +P ++ RD+K   I++++     + D  L++      
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 188
Query: 152 THINDS-NRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSH 204
             I+ + N  +GT  +MAPE           +  +++D+Y+ G +  E+   ++ S    
Sbjct: 189 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGI 246
Query: 205 FDDGEDYRLQ--DLVKKYIENESFKEIV-----DPAIVGEEGLMWPEKEQQ---LLICTE 254
               EDY+L   DLV      E  +++V      P I        P + Q    L +  +
Sbjct: 247 H---EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI--------PNRWQSCEALRVMAK 295
Query: 255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
           +  +C   +   R T +++ K L Q+ Q
Sbjct: 296 IMRECWYANGAARLTALRIKKTLSQLSQ 323

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 97  LKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSIPEGE 151
           +K+A+  AS +A+LH+       +P ++ RD+K   I++++     + D  L++      
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162
Query: 152 THINDS-NRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSH 204
             I+ + N  +GT  +MAPE           +  +++D+Y+ G +  E+   ++ S    
Sbjct: 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGI 220
Query: 205 FDDGEDYRLQ--DLVKKYIENESFKEIV-----DPAIVGEEGLMWPEKEQQ---LLICTE 254
               EDY+L   DLV      E  +++V      P I        P + Q    L +  +
Sbjct: 221 H---EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI--------PNRWQSCEALRVMAK 269
Query: 255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
           +  +C   +   R T +++ K L Q+ Q
Sbjct: 270 IMRECWYANGAARLTALRIKKTLSQLSQ 297

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 97  LKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSIPEGE 151
           +K+A+  AS +A+LH+       +P ++ RD+K   I++++     + D  L++      
Sbjct: 109 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 168
Query: 152 THINDS-NRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSH 204
             I+ + N  +GT  +MAPE           +  +++D+Y+ G +  E+   ++ S    
Sbjct: 169 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGI 226
Query: 205 FDDGEDYRLQ--DLVKKYIENESFKEIV-----DPAIVGEEGLMWPEKEQQ---LLICTE 254
               EDY+L   DLV      E  +++V      P I        P + Q    L +  +
Sbjct: 227 H---EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI--------PNRWQSCEALRVMAK 275
Query: 255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
           +  +C   +   R T +++ K L Q+ Q
Sbjct: 276 IMRECWYANGAARLTALRIKKTLSQLSQ 303

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 97  LKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSIPEGE 151
           +K+A+  AS +A+LH+       +P ++ RD+K   I++++     + D  L++      
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 201
Query: 152 THINDS-NRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSH 204
             I+ + N  +GT  +MAPE           +  +++D+Y+ G +  E+   ++ S    
Sbjct: 202 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGI 259
Query: 205 FDDGEDYRLQ--DLVKKYIENESFKEIV-----DPAIVGEEGLMWPEKEQQ---LLICTE 254
               EDY+L   DLV      E  +++V      P I        P + Q    L +  +
Sbjct: 260 H---EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI--------PNRWQSCEALRVMAK 308
Query: 255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
           +  +C   +   R T +++ K L Q+ Q
Sbjct: 309 IMRECWYANGAARLTALRIKKTLSQLSQ 336

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 97  LKIAIEIASAVAYLHVGF----SRPVVS-RDIKPTTIVLQEENVAQLFDFTLSLSIPEGE 151
           +K+A+  AS +A+LH+       +P ++ RD+K   I++++     + D  L++      
Sbjct: 104 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 163
Query: 152 THINDS-NRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSH 204
             I+ + N  +GT  +MAPE           +  +++D+Y+ G +  E+   ++ S    
Sbjct: 164 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGI 221
Query: 205 FDDGEDYRLQ--DLVKKYIENESFKEIV-----DPAIVGEEGLMWPEKEQQ---LLICTE 254
               EDY+L   DLV      E  +++V      P I        P + Q    L +  +
Sbjct: 222 H---EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI--------PNRWQSCEALRVMAK 270
Query: 255 LAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
           +  +C   +   R T +++ K L Q+ Q
Sbjct: 271 IMRECWYANGAARLTALRIKKTLSQLSQ 298

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 75  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLCQVIQMELDHERMSYLLY 133
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T    +  V+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVV 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 EFMKKLQPTVRTYVEN 262

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I SAV Y H      VV RD+KP  ++L     A++ DF LS  + +GE          
Sbjct: 119 QILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRTSC 171
Query: 162 GTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTG 196
           G+  + APE  +   ++  + D++S G +L  LL G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSN 158
            +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 140 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSN 158
            +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 140 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 196
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSN 158
            +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 139 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSN 158
            +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 139 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSIPEGETHI 154
           L   ++IA  ++YL       +V RD+    ++++  N  ++ DF L+  L I E E H 
Sbjct: 122 LNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH- 177
Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            D  +V     +MA E      F+ +SDV+S+G  + EL+T
Sbjct: 178 ADGGKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E   + 
Sbjct: 107 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 163
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            ++      +  PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 164 GSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E   + 
Sbjct: 108 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 164
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            ++      +  PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 165 GSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A +I+  + YL       +V RD+    I++ E    ++ DF LS  + E ++++  
Sbjct: 153 ISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           S   I    +MA E      ++ +SDV+SFG LL E++T
Sbjct: 210 SQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 75  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLCQVIQMELDHERMSYLLY 133
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T    +  V+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVV 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 EFMKKLQPTVRTYVEN 262

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E   + 
Sbjct: 114 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 170
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            ++      +  PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 171 GSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSN 158
            +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 137 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 193
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 91  PFSVSKLKIAI-EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSI 147
           PFS ++ +  + +I + + YLH   S  ++ RD+  + ++L      ++ DF L+  L +
Sbjct: 108 PFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164
Query: 148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           P  E H      + GT  +++PE  T      +SDV+S G +   LL G+
Sbjct: 165 PH-EKHYT----LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSN 158
            +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 144 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 200
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 201 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E   + 
Sbjct: 103 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            ++      +  PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 160 GSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A ++A+ + YL  G     V RD+     ++ +  V ++ DF +S  I   + +   
Sbjct: 132 LAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-YYRV 187
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISY 201
             R +    +M PE      F+ +SDV+SFG +L E+ T GK+  Y
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E   + 
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            ++      +  PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 180 GSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A ++A+ + YL  G     V RD+     ++ +  V ++ DF +S  I   + +   
Sbjct: 138 LAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-YYRV 193
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISY 201
             R +    +M PE      F+ +SDV+SFG +L E+ T GK+  Y
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THINDSN 158
            +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + + E   +++  
Sbjct: 198 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 254
Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                  +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 75  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLSQVIQMELDHERMSYLLY 133
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T    +  V+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVV 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 EFMKKLQPTVRTYVEN 262

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN- 155
           L   ++IA  + YL     R +V RD+    ++++  N  ++ DF L+  +   E   N 
Sbjct: 120 LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           D  ++     +MA E      F+ +SDV+S+G  + EL+T
Sbjct: 177 DGGKM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN- 155
           L   ++IA  + YL     R +V RD+    ++++  N  ++ DF L+  +   E   N 
Sbjct: 143 LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           D  ++     +MA E      F+ +SDV+S+G  + EL+T
Sbjct: 200 DGGKM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 126 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 181
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 182 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 118 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 173
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 174 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A ++A+ + YL  G     V RD+     ++ +  V ++ DF +S  I     +  D
Sbjct: 161 LAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDI-----YSTD 212
Query: 157 SNRVIG----TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISY 201
             RV G       +M PE      F+ +SDV+SFG +L E+ T GK+  Y
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 19/137 (13%)
Query: 68  FYKLY--KGFLQDRPISVMKFEDTFPFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIK 124
           FY  Y    F+Q     +M  E    FS  K++ +  ++   + Y+H   S  VV RD+K
Sbjct: 119 FYDFYLVMPFMQTDLQKIMGME----FSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLK 171
Query: 125 PTTIVLQEENVAQLFDFTLSLSIPEGETHIN-DSNRVIGTFGFMAPEYRTTG-DFSEKSD 182
           P  + + E+   ++ DF L+        H + +    + T  + APE   +   +++  D
Sbjct: 172 PGNLAVNEDCELKILDFGLA-------RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVD 224
Query: 183 VYSFGALLLELLTGKKI 199
           ++S G ++ E+LTGK +
Sbjct: 225 IWSVGCIMAEMLTGKTL 241

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 114 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 170 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 75  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLSQVIQMELDHERMSYLLY 133
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T    +  V+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVV 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 EFMKKLQPTVRTYVEN 262

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 126 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 181
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 182 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 133 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 188
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 189 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH-IN 155
           +   +++A  + YL     +  V RD+     +L E    ++ DF L+  I + E + + 
Sbjct: 127 ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD 206
                     + A E   T  F+ KSDV+SFG LL ELLT     Y  H D
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY-RHID 233

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 122 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 177
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 178 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 114 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 170 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 114 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 170 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 115 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 170
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 171 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 127 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 182
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 183 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 235

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 114 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 170 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 114 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 170 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 148 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 204 AKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 192
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWT----- 198
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 75  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLCQVIQMELDHERMSYLLY 133
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +   G + + +   V 
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVV- 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED----------- 210
            T  + APE      + E  D++S G ++ E++  K +     + D  +           
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 211 ---YRLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 AFMKKLQPTVRNYVEN 262

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 190
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 114 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 170 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 198
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL--SLSIPEG 150
           SV+     +++ + +AY H    R V+ RD+KP  +++  E   ++ DF L  +  IP  
Sbjct: 99  SVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-- 153
Query: 151 ETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTG 196
              +      I T  + AP+    +  +S   D++S G +  E++ G
Sbjct: 154 ---VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 148 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 204 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 198
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 114 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 170 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 198
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 190
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 95  SKLKIAI-EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSIPEGE 151
           S++KI + ++   VA+ H      ++ RD+KP  +++  +   +L DF L+    IP   
Sbjct: 119 SQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP--- 172
Query: 152 THINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKI 199
             +      + T  + AP+    +  +S   D++S G +  E++TGK +
Sbjct: 173 --VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 95  SKLKIAI-EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS--LSIPEGE 151
           S++KI + ++   VA+ H      ++ RD+KP  +++  +   +L DF L+    IP   
Sbjct: 119 SQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP--- 172
Query: 152 THINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTGKKI 199
             +      + T  + AP+    +  +S   D++S G +  E++TGK +
Sbjct: 173 --VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWT----- 183
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 184 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 198
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++  F L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 152 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 207
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 208 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 193 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 248
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPE--YRTTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE  +  T D++   DV+S G +L ELL G+ I
Sbjct: 249 AKQLVRGEPNVS----YICSRYYRAPELIFGAT-DYTSSIDVWSAGCVLAELLLGQPI 301

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 198
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 150 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 205
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 206 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 198
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 218
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 142 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 197
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 198 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 250

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 42/196 (21%)
Query: 62  VIMKCLFYKLYKGFL------------QDRPISVMKFEDTFPFSVSKLKIAIEIASAVAY 109
           V+MKC+ +K   G L            QD  I VM+  D     V ++++  E  S + Y
Sbjct: 77  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI-VMELMDANLCQVIQMELDHERMSYLLY 135
Query: 110 --------LHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
                   LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +       +      +
Sbjct: 136 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP----FV 188
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
            T  + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 248
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 249 EFMKKLQPTVRTYVEN 264

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTL 143
           + + T P    KL +  ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  
Sbjct: 119 RAKQTLPVIYVKLYM-YQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 174
Query: 144 SLSIPEGETHINDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKI 199
           +  +  GE +++     I +  + APE      D++   DV+S G +L ELL G+ I
Sbjct: 175 AKQLVRGEPNVS----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 227

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW-----X 218
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 119 VSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS 178
           V RD+    ++L   + A++ DF LS ++   +++    +       + APE      FS
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 179 EKSDVYSFGALLLELLT 195
            +SDV+S+G  + E L+
Sbjct: 192 SRSDVWSYGVTMWEALS 208

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   ++ DF L+  + +G T       
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTW-----X 197
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 100 AIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR 159
           A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  + +G T       
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATWT----- 218
Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE   +  +++  D ++ G L+ E+  G
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ D  L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           +I S V Y H      VV RD+KP  ++L     A++ DF LS  + +GE          
Sbjct: 124 QILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRXSC 176
Query: 162 GTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTG 196
           G+  + APE  +   ++  + D++S G +L  LL G
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/226 (20%), Positives = 89/226 (39%), Gaps = 33/226 (14%)
Query: 62  VIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIE-IASAVAYLHVGFSRPVVS 120
           V+ KC    +   ++++  +     ++   F+V +L   +  I S + YL        V 
Sbjct: 98  VVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVH 154
Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSI---PEGETHINDSNRVIGTFGFMAPEYRTTGDF 177
           RD+    I++    V ++ DF +S  +   PE   +     ++     + APE      F
Sbjct: 155 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGKI--PIRWTAPEAIAYRKF 211
Query: 178 SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE 237
           +  SDV+S+G ++ E+++  +  Y        D   QD++K                  E
Sbjct: 212 TSASDVWSYGIVMWEVMSYGERPYW-------DMSNQDVIKAI----------------E 248
Query: 238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
           EG   P      +   +L   C  +   DRP   Q+   L ++ ++
Sbjct: 249 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL--SLSIPEG 150
           SV+     +++ + +AY H    R V+ RD+KP  +++  E   ++ DF L  +  IP  
Sbjct: 99  SVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-- 153
Query: 151 ETHINDSNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTG 196
              +      + T  + AP+    +  +S   D++S G +  E++ G
Sbjct: 154 ---VRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 93  SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL--SLSIPEG 150
           SV+     +++ + +AY H    R V+ RD+KP  +++  E   ++ DF L  +  IP  
Sbjct: 99  SVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-- 153
Query: 151 ETHINDSNRVIGTFGFMAPEYRT-TGDFSEKSDVYSFGALLLELLTG 196
              +      + T  + AP+    +  +S   D++S G +  E++ G
Sbjct: 154 ---VRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 21/122 (17%)
Query: 106 AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP---EGETHINDSNRVIG 162
           A+A+LH   S+ +V  D+KP  I L      +L DF L + +     GE    D      
Sbjct: 169 ALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR---- 221
Query: 163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE 222
              +MAPE    G +   +DV+S G  +LE+    ++ +      GE +  Q L + Y+ 
Sbjct: 222 ---YMAPEL-LQGSYGTAADVFSLGLTILEVACNMELPHG-----GEGW--QQLRQGYLP 270
Query: 223 NE 224
            E
Sbjct: 271 PE 272

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           ++   + +LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +     T    +  V+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVV 187
Query: 162 GTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKI-SYSSHFDDGEDY--------- 211
             + + APE      + E  D++S G ++ E++ G  +   + H D              
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 212 ----RLQDLVKKYIEN 223
               +LQ  V+ Y+EN
Sbjct: 247 EFMKKLQPTVRTYVEN 262

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A +I+  + YL       +V RD+    I++ E    ++ DF LS  + E ++ +  
Sbjct: 153 ISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           S   I    +MA E      ++ +SDV+SFG LL E++T
Sbjct: 210 SQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A +I+  + YL       +V RD+    I++ E    ++ DF LS  + E ++ +  
Sbjct: 153 ISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           S   I    +MA E      ++ +SDV+SFG LL E++T
Sbjct: 210 SQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS-NRV 160
           +I   + Y+H   S  ++ RD+KP+ + + E+   ++ D  L+        H +D     
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA-------RHTDDEMTGY 182
Query: 161 IGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKI 199
           + T  + APE       +++  D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	284
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	8e-48
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-47
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-43
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-32
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-23
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-22
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-21
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-21
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-20
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-20
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-19
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-19
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-18
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	8e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-17
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-16
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-16
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-16
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	9e-14
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-13
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-13
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-13
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	7e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	8e-13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-12
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-12
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-11
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-11
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-11
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-10
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-10
3fme_A	290	Dual specificity mitogen-activated protein kinase;	5e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-10
2dyl_A	318	Dual specificity mitogen-activated protein kinase	7e-10
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-10
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-09
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-09
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-09
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-08
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-08
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-08
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-08
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	7e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	8e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	9e-08
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	9e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-07
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-07
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-07
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	7e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	7e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-06
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	8e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	7e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  160 bits (408), Expect = 8e-48
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 16/188 (8%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG-ETHIN 155
           L+I I  A  + YLH      ++ RD+K   I+L E  V ++ DF +S    E  +TH+ 
Sbjct: 142 LEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL- 197

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK-ISYSSHFDDGEDYRLQ 214
            S  V GT G++ PEY   G  +EKSDVYSFG +L E+L  +  I  S      E   L 
Sbjct: 198 -STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL---PREMVNLA 253

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA 274
           +   +   N   ++IVDP +  +       +   L    + A KCL+ S  DRP++  V 
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADK----IRPES--LRKFGDTAVKCLALSSEDRPSMGDVL 307

Query: 275 KQLRQIYQ 282
            +L    +
Sbjct: 308 WKLEYALR 315

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  160 bits (406), Expect = 2e-47
 Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 8/181 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            +IA+  A  +AYLH      ++ RD+K   I+L EE  A + DF L+  +   +TH+  
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-- 191

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +  V GT G +APEY +TG  SEK+DV+ +G +LLEL+TG++    +   + +D  L D 
Sbjct: 192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           VK  ++ +  + +VD  + G     + ++E + LI  ++A  C   S  +RP + +V + 
Sbjct: 252 VKGLLKEKKLEALVDVDLQGN----YKDEEVEQLI--QVALLCTQSSPMERPKMSEVVRM 305

Query: 277 L 277
           L
Sbjct: 306 L 306

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  149 bits (379), Expect = 1e-43
 Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE-THIN 155
            KIA   A+ + +LH       + RDIK   I+L E   A++ DF L+ +  +   T + 
Sbjct: 136 CKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM- 191

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
            ++R++GT  +MAPE    G+ + KSD+YSFG +LLE++TG     +          L D
Sbjct: 192 -TSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP---AVDEHREPQL-LLD 245

Query: 216 LVKKYI-ENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA 274
           + ++   E ++ ++ +D  +              +     +A +CL E +  RP I +V 
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMND-----ADSTS--VEAMYSVASQCLHEKKNKRPDIKKVQ 298

Query: 275 KQLRQIYQS 283
           + L+++  S
Sbjct: 299 QLLQEMTAS 307

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  121 bits (305), Expect = 1e-32
 Identities = 49/228 (21%), Positives = 93/228 (40%), Gaps = 39/228 (17%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLH------VGFSRP-VVSRDIKPTT 127
           FL+   +S  +             IA  +A  +AYLH          +P +  RDIK   
Sbjct: 112 FLKANVVSWNEL----------CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKN 161

Query: 128 IVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEY-----RTTGDFSEKSD 182
           ++L+    A + DF L+L    G++   D++  +GT  +MAPE          D   + D
Sbjct: 162 VLLKNNLTACIADFGLALKFEAGKSAG-DTHGQVGTRRYMAPEVLEGAINFQRDAFLRID 220

Query: 183 VYSFGALLLELLTGKKISYSSHFDDGEDYRL--QDLVKKYIENESFKEIV-----DPAIV 235
           +Y+ G +L EL +    +        ++Y L  ++ + ++   E  +E+V      P + 
Sbjct: 221 MYAMGLVLWELASRCTAADGPV----DEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLR 276

Query: 236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
                 W +     ++C E   +C       R +   V +++ Q+ + 
Sbjct: 277 DY----WQKHAGMAMLC-ETIEECWDHDAEARLSAGCVGERITQMQRL 319

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 96.1 bits (239), Expect = 3e-23
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 31/214 (14%)

Query: 95  SKLKIAIEIASAVAYLH------VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL--- 145
           S  ++A  +   +AYLH        +   +  RD+    ++++ +    + DF LS+   
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171

Query: 146 --SIPEGETHINDSNRVIGTFGFMAPEY-------RTTGDFSEKSDVYSFGALLLELLTG 196
              +       N +   +GT  +MAPE        R      ++ D+Y+ G +  E+   
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

Query: 197 KKISYSSHFDDGEDYRL--QDLVKKYIENESFKEIVD-----PAIVGEEGLMWPEKEQQL 249
               +    +   +Y++  Q  V  +   E  + +V      P         W E    +
Sbjct: 232 CTDLF--PGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA----WKENSLAV 285

Query: 250 LICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
               E    C  +    R T     +++ ++   
Sbjct: 286 RSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 91.8 bits (228), Expect = 1e-21
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 42/233 (18%)

Query: 71  LYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLH-----VGFSRPVVSRDIKP 125
           L+  +L    ++V             +K+A+  AS +A+LH           +  RD+K 
Sbjct: 127 LFD-YLNRYTVTVEGM----------IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHIND-SNRVIGTFGFMAPE------YRTTGDFS 178
             I++++     + D  L++        I+   N  +GT  +MAPE           +  
Sbjct: 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 235

Query: 179 EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL--QDLVKKYIENESFKEIVDPAIVG 236
           +++D+Y+ G +  E+     I         EDY+L   DLV     + S +E+    +V 
Sbjct: 236 KRADIYAMGLVFWEIARRCSIGGIH-----EDYQLPYYDLVP---SDPSVEEMRK--VVC 285

Query: 237 EEGL------MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
           E+ L       W   E   ++  ++  +C   +   R T +++ K L Q+ Q 
Sbjct: 286 EQKLRPNIPNRWQSCEALRVMA-KIMRECWYANGAARLTALRIKKTLSQLSQQ 337

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 91.3 bits (227), Expect = 2e-21
 Identities = 49/233 (21%), Positives = 91/233 (39%), Gaps = 42/233 (18%)

Query: 71  LYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLH-----VGFSRPVVSRDIKP 125
           LY  +L+   +               LK+A    S + +LH           +  RD+K 
Sbjct: 122 LYD-YLKSTTLDAKSM----------LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHIND-SNRVIGTFGFMAPE------YRTTGDFS 178
             I++++     + D  L++        ++   N  +GT  +M PE       R      
Sbjct: 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230

Query: 179 EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL--QDLVKKYIENESFKEIVDPAIVG 236
             +D+YSFG +L E+               E+Y+L   DLV     + S++++ +  IV 
Sbjct: 231 IMADMYSFGLILWEVARRC-----VSGGIVEEYQLPYHDLVP---SDPSYEDMRE--IVC 280

Query: 237 EEGL------MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
            + L       W   E    +  +L  +C + +   R T ++V K L ++ +S
Sbjct: 281 IKKLRPSFPNRWSSDECLRQMG-KLMTECWAHNPASRLTALRVKKTLAKMSES 332

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 43/219 (19%)

Query: 71  LYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           LY   L          E  F      + IA + A  + YLH   ++ ++ RD+K   I L
Sbjct: 106 LYH-HLHAS-------ETKFEMKK-LIDIARQTARGMDYLH---AKSIIHRDLKSNNIFL 153

Query: 131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPE---YRTTGDFSEKSDVYSFG 187
            E+N  ++ DF L+ +     +  +   ++ G+  +MAPE    + +  +S +SDVY+FG
Sbjct: 154 HEDNTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212

Query: 188 ALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQ 247
            +L EL+TG ++ YS+                     +  +I+   +VG   L  P+  +
Sbjct: 213 IVLYELMTG-QLPYSNI-------------------NNRDQII--EMVGRGSLS-PDLSK 249

Query: 248 QLLIC----TELAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
               C      L  +CL +   +RP+  ++  ++ ++ +
Sbjct: 250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 42/230 (18%)

Query: 71  LYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLH-----VGFSRPVVSRDIKP 125
           LY  +LQ   +  +          S L+I + IAS +A+LH           +  RD+K 
Sbjct: 93  LYD-YLQLTTLDTV----------SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS 141

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHIND-SNRVIGTFGFMAPE------YRTTGDFS 178
             I++++     + D  L++   +    ++  +N  +GT  +MAPE           D  
Sbjct: 142 KNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSY 201

Query: 179 EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL--QDLVKKYIENESFKEIVDPAIVG 236
           ++ D+++FG +L E+               EDY+    D+V     + SF+++    +V 
Sbjct: 202 KRVDIWAFGLVLWEVARRM-----VSNGIVEDYKPPFYDVVP---NDPSFEDMRK--VVC 251

Query: 237 EEGL------MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI 280
            +         W        +  +L  +C  ++   R T +++ K L +I
Sbjct: 252 VDQQRPNIPNRWFSDPTLTSLA-KLMKECWYQNPSARLTALRIKKTLTKI 300

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 85.8 bits (213), Expect = 1e-19
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 7/104 (6%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHI 154
            +   ++ +  VAYLH    + ++ RD+KP  ++L     V ++ DF  +  I    T  
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-- 161

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
                  G+  +MAPE     ++SEK DV+S+G +L E++T +K
Sbjct: 162 ----NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 12/105 (11%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
            +K A+++A  +A+LH      +    +   ++++ E+  A++    +  S         
Sbjct: 113 AVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF-------- 163

Query: 156 DSNRVIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLELLTGK 197
            S   +    ++APE    +        +D++SF  LL EL+T +
Sbjct: 164 QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 86.1 bits (213), Expect = 4e-19
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +   +EI  A++YLH   S  +V  D+KP  I+L EE + +L D           + IN 
Sbjct: 185 IAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQL-KLIDLGAV-------SRINS 233

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
              + GT GF APE       +  +D+Y+ G  L  L    
Sbjct: 234 FGYLYGTPGFQAPE-IVRTGPTVATDIYTVGRTLAALTLDL 273

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 83.5 bits (207), Expect = 6e-19
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 24/135 (17%)

Query: 71  LYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           L +  L  + I               +  A++IA  + YLH     P++ RD+K + I++
Sbjct: 93  LNR-VLSGKRIPPDI----------LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141

Query: 131 QEENVAQLF--------DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSD 182
            ++              DF L+      E H        G + +MAPE      FS+ SD
Sbjct: 142 LQKVENGDLSNKILKITDFGLA-----REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSD 196

Query: 183 VYSFGALLLELLTGK 197
           V+S+G LL ELLTG+
Sbjct: 197 VWSYGVLLWELLTGE 211

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           +L +A ++A  + YLH   + P+V R++K   +++ ++   ++ DF LS           
Sbjct: 139 RLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--- 194

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            S    GT  +MAPE       +EKSDVYSFG +L EL T +
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 47/198 (23%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLF-----DFTLSLSIPEG 150
           KL++ ++IA  + Y+    + P+V RD++   I LQ  +          DF LS      
Sbjct: 124 KLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS------ 176

Query: 151 ETHINDSNRVIGTFGFMAPE--YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDG 208
           +  ++  + ++G F +MAPE        ++EK+D YSF  +L  +LTG +  +       
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG-EGPF------- 228

Query: 209 EDYRLQDLVKKYIENESFKEIVDPAIVGEEGL------MWPEKEQQLLICTELAFKCLSE 262
                        +  S+ +I    ++ EEGL        P + + ++        C S 
Sbjct: 229 -------------DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIE------LCWSG 269

Query: 263 SEGDRPTIVQVAKQLRQI 280
               RP    + K+L ++
Sbjct: 270 DPKKRPHFSYIVKELSEL 287

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 81.6 bits (202), Expect = 3e-18
 Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 42/202 (20%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           ++  A +IAS +AYLH   S  ++ RD+     +++E     + DF L+  + + +T   
Sbjct: 110 RVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166

Query: 156 DSNR-----------VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
                          V+G   +MAPE      + EK DV+SFG +L E++          
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA----- 221

Query: 205 FDDGEDYRLQDLVKKYIENESFKEI---VDPAIVGEEGLMWPEKEQQLLICTELAFKCLS 261
             D             +     +       P+                     +  +C  
Sbjct: 222 DPDYLP--RTMDFGLNVRGFLDRYCPPNCPPSFF------------------PITVRCCD 261

Query: 262 ESEGDRPTIVQVAKQLRQIYQS 283
                RP+ V++   L  +   
Sbjct: 262 LDPEKRPSFVKLEHWLETLRMH 283

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 80.8 bits (200), Expect = 8e-18
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + I  +I SA+   H   +     RD+KP  I++  ++ A L DF ++ +    +  +  
Sbjct: 137 VAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASAT--TDEKLTQ 191

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
               +GT  +MAPE  +    + ++D+Y+   +L E LTG 
Sbjct: 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 80.5 bits (199), Expect = 1e-17
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 24/138 (17%)

Query: 71  LYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           LY   ++D        +     +    +IA EI   + YLH   ++ ++ +D+K   +  
Sbjct: 116 LYS-VVRDA-------KIVLDVNK-TRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFY 163

Query: 131 QEENVAQLFDFTLS--LSIPEGETHINDSNRVIGTFGFMAPE-YRTTGD--------FSE 179
            +     + DF L     + +     +      G    +APE  R            FS+
Sbjct: 164 -DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSK 222

Query: 180 KSDVYSFGALLLELLTGK 197
            SDV++ G +  EL   +
Sbjct: 223 HSDVFALGTIWYELHARE 240

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 78.2 bits (192), Expect = 1e-16
 Identities = 21/150 (14%), Positives = 47/150 (31%), Gaps = 12/150 (8%)

Query: 55  DDFDGGKVIMKCLFYKLYKGFLQD--RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHV 112
            D     V+ +   Y   +  LQ     +             ++L++ +++   +A LH 
Sbjct: 170 LDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH- 228

Query: 113 GFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPE-- 170
                +V   ++P  IVL +     L  F     + +G + ++   R        A    
Sbjct: 229 --HYGLVHTYLRPVDIVLDQRGGVFLTGF--EHLVRDGASAVSPIGRGFAPPETTAERML 284

Query: 171 ---YRTTGDFSEKSDVYSFGALLLELLTGK 197
                     +   D ++ G  +  +    
Sbjct: 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +++  +   A+ + H      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 119 IEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  +++PE         +SDVYS G +L E+LTG+
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +    +I   + + H      +V RDIKP  I++      ++FDF ++ ++   ET +  
Sbjct: 114 INFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQ 168

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +N V+GT  + +PE        E +D+YS G +L E+L G+
Sbjct: 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 72.3 bits (177), Expect = 1e-14
 Identities = 29/182 (15%), Positives = 61/182 (33%), Gaps = 27/182 (14%)

Query: 66  CLFYKLYKGF-LQDRPISVMKFEDTFPFS-VSKLKIAIEIASAVAYLHVGFSRPVVSRDI 123
            L  +LY    L +  I++ K            +  A+ +   +  +H      ++  DI
Sbjct: 143 VLVGELYSYGTLLNA-INLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDI 198

Query: 124 KPTTIVLQEENVA-----------QLFDFTLSL---SIPEGETHINDSNRVIGTFGFMAP 169
           KP   +L    +             L D   S+     P+G            T GF   
Sbjct: 199 KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK----CETSGFQCV 254

Query: 170 EYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI 229
           E  +   ++ + D +   A +  +L G  +      ++G + + + L ++    + + E 
Sbjct: 255 EMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK---NEGGECKPEGLFRRLPHLDMWNEF 311

Query: 230 VD 231
             
Sbjct: 312 FH 313

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHIND 156
               +I   + +LH   + P++ RD+K   I +       ++ D  L+          + 
Sbjct: 133 SWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-----TLKRASF 186

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  VIGT  FMAPE      + E  DVY+FG  +LE+ T +
Sbjct: 187 AKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSE 226

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
                +   A+A+LH   S+ +V  D+KP  I L      +L DF L + +         
Sbjct: 160 WGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL----GTAGA 212

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                G   +MAPE    G +   +DV+S G  +LE+    +         GE +  Q L
Sbjct: 213 GEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVACNME-----LPHGGEGW--QQL 264

Query: 217 VKKYI 221
            + Y+
Sbjct: 265 RQGYL 269

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 70.4 bits (172), Expect = 6e-14
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 21/113 (18%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           +L++ +++   +A LH      +V   ++P  IVL +     L  F     + +G     
Sbjct: 208 RLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGF--EHLVRDGARV-- 260

Query: 156 DSNRVIGTFGFMAPEY-----------RTTGDFSEKSDVYSFGALLLELLTGK 197
                  + GF  PE                  +   D ++ G ++  +    
Sbjct: 261 ---VSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 69.7 bits (170), Expect = 9e-14
 Identities = 17/147 (11%), Positives = 38/147 (25%), Gaps = 13/147 (8%)

Query: 55  DDFDGGKVIMKCLFYKLYKGFLQD--RPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHV 112
              D   V    L        L+     +  +         ++   +  ++    A L  
Sbjct: 153 PGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ- 211

Query: 113 GFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEY- 171
             S+ +V     P  + +  +    L D   S     G               +   E+ 
Sbjct: 212 --SKGLVHGHFTPDNLFIMPDGRLMLGDV--SALWKVGTR----GPASSVPVTYAPREFL 263

Query: 172 -RTTGDFSEKSDVYSFGALLLELLTGK 197
             +T  F+   + +  G  +  +    
Sbjct: 264 NASTATFTHALNAWQLGLSIYRVWCLF 290

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 68.4 bits (167), Expect = 2e-13
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 12/111 (10%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS---------LSI 147
           L I I+IA AV +LH   S+ ++ RD+KP+ I    ++V ++ DF L           ++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223

Query: 148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK 198
                        +GT  +M+PE     ++S K D++S G +L ELL    
Sbjct: 224 LTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS 274

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 31/151 (20%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-----------L 145
            ++  +I  A++Y+H   S+ ++ RD+KP  I + E    ++ DF L+           L
Sbjct: 119 WRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175

Query: 146 SIPEGETHINDSNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTG-------- 196
                    ++    IGT  ++A E    TG ++EK D+YS G +  E++          
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235

Query: 197 --------KKISYSSHFDDGEDYRLQDLVKK 219
                     I +   FDD +    + +++ 
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMKVEKKIIRL 266

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 66.9 bits (164), Expect = 4e-13
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 25/137 (18%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  +I   V Y+H   S+ +++RD+KP+ I L +    ++ DF L  S+     +   
Sbjct: 125 LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL----KNDGK 177

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG--------------KKISYS 202
             R  GT  +M+PE  ++ D+ ++ D+Y+ G +L ELL                +    S
Sbjct: 178 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIIS 237

Query: 203 SHFDDGEDYRLQDLVKK 219
             FD     + + L++K
Sbjct: 238 DIFDK----KEKTLLQK 250

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 67.1 bits (164), Expect = 5e-13
 Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 42/197 (21%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF---------TLSLSI 147
           LKI  +   AV ++H     P++ RD+K   ++L  +   +L DF               
Sbjct: 139 LKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197

Query: 148 PEGETHINDSNRVIGTFGFMAPE----YRTTGDFSEKSDVYSFGALLLELLTGKKISYSS 203
            +    + +      T  +  PE    Y       EK D+++ G +L  L   +      
Sbjct: 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI-GEKQDIWALGCILYLLCFRQ-----H 251

Query: 204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSES 263
            F+DG   R        I N  +                P  + Q  +   L    L  +
Sbjct: 252 PFEDGAKLR--------IVNGKYS--------------IPPHDTQYTVFHSLIRAMLQVN 289

Query: 264 EGDRPTIVQVAKQLRQI 280
             +R +I +V  QL++I
Sbjct: 290 PEERLSIAEVVHQLQEI 306

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 66.5 bits (163), Expect = 6e-13
 Identities = 40/193 (20%), Positives = 75/193 (38%), Gaps = 35/193 (18%)

Query: 97  LKIAIEIASAVAYLH--VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI 154
           L++  ++  A+   H        V+ RD+KP  + L  +   +L DF L+  +       
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDT 170

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
           + +   +GT  +M+PE      ++EKSD++S G LL EL           F        +
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP-----F-TAFS--QK 222

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ-- 272
           +L  K I    F+ I  P    +E               E+  + L+  +  RP++ +  
Sbjct: 223 ELAGK-IREGKFRRI--PYRYSDE-------------LNEIITRMLNLKDYHRPSVEEIL 266

Query: 273 ----VAKQLRQIY 281
               + +     +
Sbjct: 267 ENPLILEHHHHHH 279

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 67.1 bits (164), Expect = 7e-13
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 34/185 (18%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-----VAQLFDFTLSLSIPEGET 152
            +  +  S +A+LH   S  +V RD+KP  I++   N      A + DF L   +  G  
Sbjct: 122 TLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178

Query: 153 HINDSNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLELLTGKKISYSSH-FDDG 208
             +  + V GT G++APE        + +   D++S G +   +++        H F   
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS-----HPFGKS 233

Query: 209 EDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP 268
              +   L+       S   +                  + LI      K ++     RP
Sbjct: 234 LQRQANILLGAC----SLDCLHPEKHEDVIA--------RELIE-----KMIAMDPQKRP 276

Query: 269 TIVQV 273
           +   V
Sbjct: 277 SAKHV 281

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 66.7 bits (163), Expect = 8e-13
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 30/177 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L   ++I  A+ ++H    R ++ RDIK   I L ++   QL DF ++  +    + +  
Sbjct: 128 LDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVEL 181

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +   IGT  +++PE      ++ KSD+++ G +L EL T K       F+ G    +++L
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH-----AFEAGS---MKNL 233

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
           V K I + SF  +        +                L  +    +  DRP++  +
Sbjct: 234 VLK-IISGSFPPV--SLHYSYD-------------LRSLVSQLFKRNPRDRPSVNSI 274

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 16/111 (14%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
                +  AV  +H      +V  D+KP   ++ +  + +L DF ++  +    T +   
Sbjct: 131 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD 186

Query: 158 NRVIGTFGFMAPE-----------YRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  +GT  +M PE            ++    S KSDV+S G +L  +  GK
Sbjct: 187 S-QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 27/177 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            K  +++ SA+ ++H   SR V+ RDIKP  + +    V +L D  L        +    
Sbjct: 139 WKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF---SSKTTA 192

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           ++ ++GT  +M+PE      ++ KSD++S G LL E+   +          G+   L  L
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ------SPFYGDKMNLYSL 246

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
            KK IE   +  +       E                +L   C++     RP +  V
Sbjct: 247 CKK-IEQCDYPPLPSDHYSEE--------------LRQLVNMCINPDPEKRPDVTYV 288

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 40/196 (20%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF---TLSLSIPEGETH 153
           L + + I   +  +H   ++    RD+KPT I+L +E    L D      +    EG   
Sbjct: 137 LWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQ 193

Query: 154 IN---DSNRVIGTFGFMAPE------YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
                D      T  + APE      +       E++DV+S G +L  ++ G+       
Sbjct: 194 ALTLQDWAAQRCTISYRAPELFSVQSHCVID---ERTDVWSLGCVLYAMMFGE-----GP 245

Query: 205 FDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESE 264
           +D             + + +S    V      +  L  P+  +      +L    ++   
Sbjct: 246 YDM-----------VFQKGDSVALAV------QNQLSIPQSPRHSSALWQLLNSMMTVDP 288

Query: 265 GDRPTIVQVAKQLRQI 280
             RP I  +  QL  +
Sbjct: 289 HQRPHIPLLLSQLEAL 304

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 16/111 (14%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
                +  AV  +H      +V  D+KP   ++ +  + +L DF ++  +    T +   
Sbjct: 112 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD 167

Query: 158 NRVIGTFGFMAPE-----------YRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  +GT  +M PE            ++    S KSDV+S G +L  +  GK
Sbjct: 168 S-QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 64.1 bits (156), Expect = 8e-12
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
                +  AV  +H      +V  D+KP   ++ +  + +L DF ++  +    T +   
Sbjct: 159 SYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD 214

Query: 158 NRVIGTFGFMAPE-----------YRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  +G   +M PE            ++    S KSDV+S G +L  +  GK
Sbjct: 215 S-QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 38/186 (20%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS---------LSI 147
           L I ++IA AV +LH   S+ ++ RD+KP+ I    ++V ++ DF L           ++
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177

Query: 148 PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
                        +GT  +M+PE      +S K D++S G +L ELL          F  
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--------PFST 229

Query: 208 GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR 267
             +      +   + N  F  +                 + +++        LS S  +R
Sbjct: 230 QME--RVRTLTD-VRNLKFPPLFTQKY----------PCEYVMVQ-----DMLSPSPMER 271

Query: 268 PTIVQV 273
           P  + +
Sbjct: 272 PEAINI 277

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K++I +   + YL       ++ RD+KP+ I++      +L DF +S     G+   + +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 187

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           N  +GT  +M+PE      +S +SD++S G  L+E+  G+
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 62.2 bits (151), Expect = 4e-11
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 12/127 (9%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           FL+      ++           + +A +IAS +AY+        V RD++   I++ E  
Sbjct: 351 FLKGETGKYLRLPQL-------VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL 400

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
           V ++ DF L+  I + E       +      + APE    G F+ KSDV+SFG LL EL 
Sbjct: 401 VCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458

Query: 195 TGKKISY 201
           T  ++ Y
Sbjct: 459 TKGRVPY 465

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 12/127 (9%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           FL+      ++           + +A +IAS +AY+        V RD++   I++ E  
Sbjct: 268 FLKGETGKYLRLPQL-------VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL 317

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELL 194
           V ++ DF L+  I + E       +      + APE    G F+ KSDV+SFG LL EL 
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375

Query: 195 TGKKISY 201
           T  ++ Y
Sbjct: 376 TKGRVPY 382

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 61.4 bits (149), Expect = 7e-11
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 23/132 (17%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           L Y L +                F  +  +   A EI   + ++H   +R VV RD+KP 
Sbjct: 279 LHYHLSQ-------------HGVFSEADMRFYAA-EIILGLEHMH---NRFVVYRDLKPA 321

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKS-DVYS 185
            I+L E    ++ D  L+    + + H      V GT G+MAPE    G   + S D +S
Sbjct: 322 NILLDEHGHVRISDLGLACDFSKKKPH----ASV-GTHGYMAPEVLQKGVAYDSSADWFS 376

Query: 186 FGALLLELLTGK 197
            G +L +LL G 
Sbjct: 377 LGCMLFKLLRGH 388

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           L Y L +                F     KL I  E+  A+ YL    ++ ++ RD+KP 
Sbjct: 102 LRYHLQQ-------------NVHFKEETVKLFIC-ELVMALDYLQ---NQRIIHRDMKPD 144

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPE---YRTTGDFSEKSDV 183
            I+L E     + DF ++  +P           + GT  +MAPE    R    +S   D 
Sbjct: 145 NILLDEHGHVHITDFNIAAMLPRETQI----TTMAGTKPYMAPEMFSSRKGAGYSFAVDW 200

Query: 184 YSFGALLLELLTGK 197
           +S G    ELL G+
Sbjct: 201 WSLGVTAYELLRGR 214

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +I+SA+ YL     +  + R++     ++ E ++ ++ DF LS  +       + 
Sbjct: 321 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      + APE      FS KSDV++FG LL E+ T     Y
Sbjct: 378 GAKF--PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 11/103 (10%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHI 154
            I  ++ S V YLH      +V RD+KP  ++L+   ++ + ++ DF LS      +   
Sbjct: 140 VIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM- 195

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
                 +GT  ++APE      + EK DV+S G +L  LL G 
Sbjct: 196 ---KERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGY 234

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
            L++  + A+ + YL    S+  + RD+     ++ E+NV ++ DF +S    +G    +
Sbjct: 215 LLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271

Query: 156 DSNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
                 G         APE    G +S +SDV+SFG LL E  +     Y
Sbjct: 272 G-----GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 34/142 (23%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
               E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S        H   S
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSS 162

Query: 158 NR--VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG-------------KKI--- 199
            R  + GT  ++ PE        EK D++S G L  E L G             K+I   
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222

Query: 200 --SYSSHFDDGEDYRLQDLVKK 219
             ++     +G     +DL+ +
Sbjct: 223 EFTFPDFVTEG----ARDLISR 240

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 16/125 (12%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHI 154
           +I  ++ S + Y+H      +V RD+KP  ++L+   ++   ++ DF LS      +   
Sbjct: 130 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM- 185

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                 IGT  ++APE    G + EK DV+S G +L  LL+G        F+   +Y + 
Sbjct: 186 ---KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSG-----CPPFNGANEYDIL 236

Query: 215 DLVKK 219
             V+K
Sbjct: 237 KKVEK 241

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 31/148 (20%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           F    S   +  E+A A+ Y H    R V+ RDIKP  +++  +   ++ DF  S+  P 
Sbjct: 111 FDEQRSATFME-ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166

Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG------------- 196
                     + GT  ++ PE        EK D++  G L  E L G             
Sbjct: 167 LRRRT-----MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH 221

Query: 197 KKI-----SYSSHFDDGEDYRLQDLVKK 219
           ++I      +     DG     +DL+ K
Sbjct: 222 RRIVNVDLKFPPFLSDG----SKDLISK 245

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 59.3 bits (144), Expect = 3e-10
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHI 154
            I  +I S + YLH      +V RDIKP  I+L+        ++ DF LS    +     
Sbjct: 150 NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL- 205

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
                 +GT  ++APE      ++EK DV+S G ++  LL G
Sbjct: 206 ---RDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCG 243

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 16/114 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE----- 151
             + +++   + Y+H   S  +V  DIKP+ I +   ++                     
Sbjct: 118 KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174

Query: 152 -------THINDSNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGK 197
                  T I+      G   F+A E  +       K+D+++    ++     +
Sbjct: 175 IGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHINDSNRV 160
           +I   + YLH      +V RDIK   +++   + V ++ DF  S  +             
Sbjct: 130 QILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET---F 183

Query: 161 IGTFGFMAPE--YRTTGDFSEKSDVYSFGALLLELLTGK 197
            GT  +MAPE   +    + + +D++S G  ++E+ TGK
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLSIPEGETHINDSNR- 159
           +    + YLH   +R ++  D+K   ++L  + + A L DF  +L +       +     
Sbjct: 158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214

Query: 160 -VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            + GT   MAPE         K D++S   ++L +L G 
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 16/107 (14%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KIA+ I  A+ +LH      V+ RD+KP+ +++      ++ DF +S        ++ D 
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGIS-------GYLVDD 163

Query: 158 ---NRVIGTFGFMAPE----YRTTGDFSEKSDVYSFGALLLELLTGK 197
              +   G   +MAPE          +S KSD++S G  ++EL   +
Sbjct: 164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 49/221 (22%), Positives = 81/221 (36%), Gaps = 46/221 (20%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           +L    I + +           L  A +I   +AYLH   ++  + RD+    ++L  + 
Sbjct: 125 YLPRHSIGLAQL----------LLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDR 171

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALL 190
           + ++ DF L+ ++PEG     +  RV           APE      F   SDV+SFG  L
Sbjct: 172 LVKIGDFGLAKAVPEGH----EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 227

Query: 191 LELLTGKKISYSSHFDDGEDYRLQDLVKKY--IENESFKEIVDPAIVGEEG--LMWPEKE 246
            ELLT     +           L+ +      +      E++      E G  L  P+K 
Sbjct: 228 YELLT-----HCDSSQSPPTKFLELIGIAQGQMTVLRLTELL------ERGERLPRPDK- 275

Query: 247 QQLLICT----ELAFKCLSESEGDRPTIVQVAKQLRQIYQS 283
                C      L   C       RPT   +   L+ +++ 
Sbjct: 276 -----CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 57.8 bits (140), Expect = 7e-10
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           K+ + I  A+ YL       V+ RD+KP+ I+L E    +L DF +S         + D 
Sbjct: 128 KMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGIS-------GRLVDD 178

Query: 158 ---NRVIGTFGFMAPE-----YRTTGDFSEKSDVYSFGALLLELLTGK 197
              +R  G   +MAPE       T  D+  ++DV+S G  L+EL TG+
Sbjct: 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 14/102 (13%), Positives = 25/102 (24%), Gaps = 35/102 (34%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           ++    +A+A    H      V      P         V                  ++ 
Sbjct: 132 IRAMQSLAAAADAAH---RAGVALSIDHP-------SRV-----------------RVSI 164

Query: 157 SNRV-IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
              V +     M          + + D+   GA L  LL  +
Sbjct: 165 DGDVVLAYPATMPDA-------NPQDDIRGIGASLYALLVNR 199

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           L + +Y              +  FP + +    A EI   +  LH      +V RD+KP 
Sbjct: 271 LKFHIYH-----------MGQAGFPEARAVFYAA-EICCGLEDLH---RERIVYRDLKPE 315

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSF 186
            I+L +    ++ D  L++ +PEG+T        +GT G+MAPE      ++   D ++ 
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371

Query: 187 GALLLELLTGK 197
           G LL E++ G+
Sbjct: 372 GCLLYEMIAGQ 382

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 57.2 bits (138), Expect = 1e-09
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  + ++A  + +L    SR  + RD+    I+L E+NV ++ DF L+  I +   ++  
Sbjct: 196 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +  +    +MAPE      ++ +SDV+SFG LL E+ +
Sbjct: 253 GDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 46/221 (20%), Positives = 85/221 (38%), Gaps = 45/221 (20%)

Query: 76  LQDRPISVMKFEDTFPFSVSKLKIAI--EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE 133
           LQD   S    ++          I++  +IAS VA+LH   S  ++ RD+KP  I++   
Sbjct: 95  LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTS 151

Query: 134 NVAQLF-------------DFTLSLSIPEGETHINDS-NRVIGTFGFMAPE-------YR 172
           +                  DF L   +  G++    + N   GT G+ APE        +
Sbjct: 152 SRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQ 211

Query: 173 TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP 232
           T    +   D++S G +   +L+  K     H    +  R  ++++     +  K + D 
Sbjct: 212 TKRRLTRSIDIFSMGCVFYYILSKGK-----HPFGDKYSRESNIIRGIFSLDEMKCLHDR 266

Query: 233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
           +++ E               T+L  + +      RPT ++V
Sbjct: 267 SLIAE--------------ATDLISQMIDHDPLKRPTAMKV 293

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 32/197 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  + +I   + YL    SR  V RD+    I+++ E   ++ DF L+  +P  +    D
Sbjct: 130 LLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----D 182

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
              V           APE  +   FS +SDV+SFG +L EL T    S S      E  R
Sbjct: 183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS---AEFLR 239

Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEG--LMWPEKEQQLLICT----ELAFKCLSESEGD 266
           +    +         E++      EEG  L  P        C     EL   C + S  D
Sbjct: 240 MMGCERDVPALSRLLELL------EEGQRLPAPPA------CPAEVHELMKLCWAPSPQD 287

Query: 267 RPTIVQVAKQLRQIYQS 283
           RP+   +  QL  ++  
Sbjct: 288 RPSFSALGPQLDMLWSG 304

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHI 154
           +I  ++ S + Y+H      +V RD+KP  I+L+   ++   ++ DF LS    +     
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM- 180

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
                 IGT  ++APE    G + EK DV+S G +L  LL+G
Sbjct: 181 ---KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL--FDFTLSLSIPEGETHIN 155
            I  +I SA+ YLH   ++ +  RDIKP   +       ++   DF LS    +      
Sbjct: 172 NIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228

Query: 156 DS-NRVIGTFGFMAPE--YRTTGDFSEKSDVYSFGALLLELLTGK 197
                  GT  F+APE    T   +  K D +S G LL  LL G 
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 16/107 (14%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           KI +    A+ +L    +  ++ RDIKP+ I+L      +L DF +S         + DS
Sbjct: 129 KITLATVKALNHLK--ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS-------GQLVDS 179

Query: 158 ---NRVIGTFGFMAPE----YRTTGDFSEKSDVYSFGALLLELLTGK 197
               R  G   +MAPE      +   +  +SDV+S G  L EL TG+
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 55.3 bits (133), Expect = 5e-09
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 22/134 (16%)

Query: 83  VMKF----------EDTFPFSVSKLKIAI---EIASAVAYLHVGFSRPVVSRDIKPTTIV 129
           V  F             F   +++L IA     +  A+ Y+H       V R +K + I+
Sbjct: 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHIL 160

Query: 130 LQEENVAQLFDFTLSLSIPEG----ETHINDSNRVIGTFGFMAPE--YRTTGDFSEKSDV 183
           +  +    L     +LS+           +     +    +++PE   +    +  KSD+
Sbjct: 161 ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 220

Query: 184 YSFGALLLELLTGK 197
           YS G    EL  G 
Sbjct: 221 YSVGITACELANGH 234

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 55.6 bits (134), Expect = 5e-09
 Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 20/158 (12%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           + Y +Y          V +    F    +    A +I S + +LH    R ++ RD+KP 
Sbjct: 272 IRYHIYN---------VDEDNPGFQEPRAIFYTA-QIVSGLEHLH---QRNIIYRDLKPE 318

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSF 186
            ++L ++   ++ D  L++ +  G+T         GT GFMAPE     ++    D ++ 
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGY---AGTPGFMAPELLLGEEYDFSVDYFAL 375

Query: 187 GALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE 224
           G  L E++  +          GE    ++L ++ +E  
Sbjct: 376 GVTLYEMIAAR----GPFRARGEKVENKELKQRVLEQA 409

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 55.1 bits (133), Expect = 5e-09
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 19/159 (11%)

Query: 71  LYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           + K F +   +    +    P  V K  I   + ++ +Y+H    + +  RD+KP+ I++
Sbjct: 130 ILK-FDEYFFVLDKNYTCFIPIQVIK-CIIKSVLNSFSYIH--NEKNICHRDVKPSNILM 185

Query: 131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPE--YRTTGDFSEKSDVYSFGA 188
            +    +L DF  S  + + +          GT+ FM PE     +     K D++S G 
Sbjct: 186 DKNGRVKLSDFGESEYMVDKKIK-----GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI 240

Query: 189 LLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK 227
            L  +           F       L +L    I  ++ +
Sbjct: 241 CLYVMFYNV-----VPFSL--KISLVELFNN-IRTKNIE 271

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 55.5 bits (133), Expect = 6e-09
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 10/104 (9%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETH 153
             +  +I+SA+ YLH      ++ RD+KP  IVLQ      + ++ D   +  + +GE  
Sbjct: 124 RTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL- 179

Query: 154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
                  +GT  ++APE      ++   D +SFG L  E +TG 
Sbjct: 180 ---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 39/193 (20%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L   ++IA  + YL     R +V RD+    ++++     ++ DF L+  +   E   + 
Sbjct: 120 LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                G      MA E      ++ +SDV+S+G  + EL+T     Y       +     
Sbjct: 177 EG---GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-------DGIPAS 226

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT----ELAFKCLSESEGDRPTI 270
           + +   +E             GE  L  P       ICT     +  KC       RP  
Sbjct: 227 E-ISSILEK------------GER-LPQPP------ICTIDVYMIMRKCWMIDADSRPKF 266

Query: 271 VQVAKQLRQIYQS 283
            ++  +  ++ + 
Sbjct: 267 RELIIEFSKMARD 279

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 73  KGFLQDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ 131
           K +L+    ++       P S+SK+ ++A EIA  +AYL+   +   V RD+     ++ 
Sbjct: 116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVA 172

Query: 132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF-----MAPEYRTTGDFSEKSDVYSF 186
           E+   ++ DF ++  I E + +        G  G      M+PE    G F+  SDV+SF
Sbjct: 173 EDFTVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226

Query: 187 GALLLELLT 195
           G +L E+ T
Sbjct: 227 GVVLWEIAT 235

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 29/196 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L+   +I   + YL    ++  + RD+    I+++ EN  ++ DF L+  +P+ + +   
Sbjct: 148 LQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 204

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                G       APE  T   FS  SDV+SFG +L EL T               Y  +
Sbjct: 205 KEP--GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---------------YIEK 247

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQL---LICT----ELAFKCLSESEGDR 267
                              ++    +   +   +L     C      +  +C + +   R
Sbjct: 248 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 307

Query: 268 PTIVQVAKQLRQIYQS 283
           P+   +A ++ QI   
Sbjct: 308 PSFRDLALRVDQIRDQ 323

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 29/196 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L+   +I   + YL    ++  + RD+    I+++ EN  ++ DF L+  +P+ +     
Sbjct: 117 LQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                G       APE  T   FS  SDV+SFG +L EL T               Y  +
Sbjct: 174 KEP--GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---------------YIEK 216

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQL---LICT----ELAFKCLSESEGDR 267
                              ++    +   +   +L     C      +  +C + +   R
Sbjct: 217 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 276

Query: 268 PTIVQVAKQLRQIYQS 283
           P+   +A ++ QI  +
Sbjct: 277 PSFRDLALRVDQIRDN 292

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 43/198 (21%), Positives = 72/198 (36%), Gaps = 36/198 (18%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK A++I   + YL    SR  V RD+    ++++ E+  ++ DF L+ +I   +    +
Sbjct: 129 LKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK----E 181

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
              V           APE      F   SDV+SFG  L ELLT     Y           
Sbjct: 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSPMALF 236

Query: 213 LQDLVKKY--IENESFKEIVDPAIVGEEG--LMWPEKEQQLLICT----ELAFKCLSESE 264
           L+ +   +  +        +      +EG  L  P        C     +L  KC     
Sbjct: 237 LKMIGPTHGQMTVTRLVNTL------KEGKRLPCPPN------CPDEVYQLMRKCWEFQP 284

Query: 265 GDRPTIVQVAKQLRQIYQ 282
            +R +   + +    + +
Sbjct: 285 SNRTSFQNLIEGFEALLK 302

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 32/207 (15%), Positives = 61/207 (29%), Gaps = 33/207 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGET 152
           L +  ++   + +L       +V R+IKP  I+       Q    L DF  +  + + E 
Sbjct: 115 LIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171

Query: 153 HINDSNRVIGTFGFMAPE--------YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
                  + GT  ++ P+              +    D++S G       TG        
Sbjct: 172 ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS-----LP 222

Query: 205 FDDGEDYRL-QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQ--------LLICTEL 255
           F   E  R  ++++ K I  +    I          + W               ++ T +
Sbjct: 223 FRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282

Query: 256 AFKCLSESEGDRPTIVQVAKQLRQIYQ 282
               L   +       Q   +   I  
Sbjct: 283 LANILEADQEKCWGFDQFFAETSDILH 309

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 11/117 (9%)

Query: 85  KFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS 144
           KFED  P  +++  +A E+  A+  +H       V RDIKP  I++      +L DF   
Sbjct: 167 KFEDRLPEEMARFYLA-EMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222

Query: 145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKS-----DVYSFGALLLELLTG 196
           L + E  T    S+  +GT  +++PE     +  +       D +S G  + E+L G
Sbjct: 223 LKLMEDGT--VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 24/155 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGET 152
           L +  ++   + +L       +V R+IKP  I+       Q    L DF  +  + + E 
Sbjct: 115 LIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171

Query: 153 HINDSNRVIGTFGFMAPE--------YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
                  + GT  ++ P+              +    D++S G       TG        
Sbjct: 172 ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS-----LP 222

Query: 205 FDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG 239
           F   E  R    V   I        +      E G
Sbjct: 223 FRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG 257

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 15/121 (12%)

Query: 84  MKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL 143
            KF +  P  +++  +A EI  A+  +H       V RDIKP  I+L      +L DF  
Sbjct: 153 SKFGERIPAEMARFYLA-EIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGS 208

Query: 144 SL-SIPEGETHINDSNRVIGTFGFMAPE-------YRTTGDFSEKSDVYSFGALLLELLT 195
            L    +G      S   +GT  +++PE          TG +  + D ++ G    E+  
Sbjct: 209 CLKLRADGTVR---SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265

Query: 196 G 196
           G
Sbjct: 266 G 266

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 20/131 (15%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           FL+    S              +  + +IA  +A++     R  + RD++   I++    
Sbjct: 272 FLKSDEGSKQPLPKL-------IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 321

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALL 190
           V ++ DF L+  I + E    +  +      F     APE    G F+ KSDV+SFG LL
Sbjct: 322 VCKIADFGLARVIEDNEYTAREGAK------FPIKWTAPEAINFGSFTIKSDVWSFGILL 375

Query: 191 LELLTGKKISY 201
           +E++T  +I Y
Sbjct: 376 MEIVTYGRIPY 386

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 52.9 bits (128), Expect = 3e-08
 Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 22/132 (16%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           LF +L K             E  F     K  +A E+A A+ +LH   S  ++ RD+KP 
Sbjct: 113 LFTRLSK-------------EVMFTEEDVKFYLA-ELALALDHLH---SLGIIYRDLKPE 155

Query: 127 TIVLQEENVAQLFDFTLS-LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYS 185
            I+L EE   +L DF LS  SI   +     +    GT  +MAPE       ++ +D +S
Sbjct: 156 NILLDEEGHIKLTDFGLSKESIDHEKK----AYSFCGTVEYMAPEVVNRRGHTQSADWWS 211

Query: 186 FGALLLELLTGK 197
           FG L+ E+LTG 
Sbjct: 212 FGVLMFEMLTGT 223

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 14/120 (11%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSNR 159
           I  AVAYLH      +V RD+KP  ++      +   ++ DF LS  +            
Sbjct: 157 ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM----KT 209

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
           V GT G+ APE      +  + D++S G +   LL G    +   +D+  D  +   +  
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG----FEPFYDERGDQFMFRRILN 265

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 9/105 (8%)

Query: 99  IAI---EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           IA    E+   + YLH       + RD+K   I+L E+   Q+ DF +S  +  G     
Sbjct: 123 IATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179

Query: 156 DSNR--VIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  R   +GT  +MAPE       +  K+D++SFG   +EL TG 
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 99  IAI---EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           IA    EI   + YLH   S   + RDIK   ++L E    +L DF ++  + +      
Sbjct: 121 IATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QI 174

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             N  +GT  +MAPE      +  K+D++S G   +EL  G+
Sbjct: 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 14/105 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +   +++A  + YL    S+  V RD+     +L E+   ++ DF L+  + +      +
Sbjct: 131 IGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-----KE 182

Query: 157 SNRVIGTFGF------MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
              V    G       MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 13/109 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E    +
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      F     APE    G F+ KSDV+SFG LL E++T  +I Y
Sbjct: 169 GAK------FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           LF +L +             E  F    +   +A EI+ A+ +LH    + ++ RD+KP 
Sbjct: 108 LFMQLER-------------EGIFMEDTACFYLA-EISMALGHLH---QKGIIYRDLKPE 150

Query: 127 TIVLQEENVAQLFDFTLS-LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYS 185
            I+L  +   +L DF L   SI +G      ++   GT  +MAPE       +   D +S
Sbjct: 151 NIMLNHQGHVKLTDFGLCKESIHDGTV----THTFCGTIEYMAPEILMRSGHNRAVDWWS 206

Query: 186 FGALLLELLTGK 197
            GAL+ ++LTG 
Sbjct: 207 LGALMYDMLTGA 218

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 53.0 bits (127), Expect = 4e-08
 Identities = 38/191 (19%), Positives = 76/191 (39%), Gaps = 34/191 (17%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            ++  +++  + YL     +  V R++    ++L   + A++ DF LS ++   +++   
Sbjct: 439 AELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
            +       + APE      FS +SDV+S+G  + E L+  +  Y       +  +  + 
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY-------KKMKGPE- 547

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT----ELAFKCLSESEGDRPTIVQ 272
           V  +IE             G+  +  P +      C      L   C      DRP  + 
Sbjct: 548 VMAFIEQ------------GKR-MECPPE------CPPELYALMSDCWIYKWEDRPDFLT 588

Query: 273 VAKQLRQIYQS 283
           V +++R  Y S
Sbjct: 589 VEQRMRACYYS 599

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 52.9 bits (127), Expect = 4e-08
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + +   +   
Sbjct: 494 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 550

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
             ++     +MAPE      F+  SDV+ FG  + E+L 
Sbjct: 551 KGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 40/171 (23%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           L   + K               +F  + ++   A EI SA+ YLH    + ++ RD+KP 
Sbjct: 117 LLKYIRK-------------IGSFDETCTRFYTA-EIVSALEYLH---GKGIIHRDLKPE 159

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSF 186
            I+L E+   Q+ DF  +  +   E+    +N  +GT  +++PE  T     + SD+++ 
Sbjct: 160 NILLNEDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 218

Query: 187 GALLLELLTG------------------KKISYSSHFDDGEDYRLQDLVKK 219
           G ++ +L+ G                   +  +   F      + +DLV+K
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEK 265

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 8/101 (7%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L   ++IA  + YL     R +V RD+    ++++     ++ DF L+  +   E   + 
Sbjct: 120 LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                G      MA E      ++ +SDV+S+G  + EL+T
Sbjct: 177 EG---GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 16/125 (12%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHI 154
           ++  ++ +A+AY H   S+ VV +D+KP  I+ Q     +  ++ DF L+      E   
Sbjct: 128 ELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS- 183

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                  GT  +MAPE     D + K D++S G ++  LLTG        F       +Q
Sbjct: 184 ---TNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG-----CLPFTGTSLEEVQ 234

Query: 215 DLVKK 219
                
Sbjct: 235 QKATY 239

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-L 145
           E  F    ++   A EI SA+ YLH    + VV RD+K   ++L ++   ++ DF L   
Sbjct: 242 ERVFSEDRARFYGA-EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            I +G T         GT  ++APE     D+    D +  G ++ E++ G+
Sbjct: 299 GIKDGAT----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 13/100 (13%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           +   +  LH      +V RD+KP  I+L ++   +L DF  S  +  GE        V G
Sbjct: 133 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL----REVCG 185

Query: 163 TFGFMAPE------YRTTGDFSEKSDVYSFGALLLELLTG 196
           T  ++APE            + ++ D++S G ++  LL G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 51.8 bits (125), Expect = 5e-08
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 16/120 (13%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSNR 159
           + SAVAY H      V  RD+KP   +      ++  +L DF L+     G+        
Sbjct: 115 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM----RT 167

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
            +GT  +++P+    G +  + D +S G ++  LL G        F    D  +   +++
Sbjct: 168 KVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCG-----YPPFSAPTDSEVMLKIRE 221

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 51.4 bits (124), Expect = 7e-08
 Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 13/109 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +   + 
Sbjct: 107 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      F     +PE  +   +S KSDV+SFG L+ E+ +  KI Y
Sbjct: 164 GTK------FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 8/101 (7%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L   ++IA  + YL       +V R++    ++L+  +  Q+ DF ++  +P  +  +  
Sbjct: 118 LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           S           MA E    G ++ +SDV+S+G  + EL+T
Sbjct: 175 SE---AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 19/129 (14%)

Query: 73  KGFLQDRPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ 131
             FL    I     E+ F   +  L +  ++IA  + YL    SR  + RD+     +L 
Sbjct: 119 HAFLLASRIG----ENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLA 171

Query: 132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF-----MAPEYRTTGDFSEKSDVYSF 186
           E+    + DF LS  I  G+ +        G         +A E      ++  SDV++F
Sbjct: 172 EDMTVCVADFGLSRKIYSGDYY------RQGCASKLPVKWLALESLADNLYTVHSDVWAF 225

Query: 187 GALLLELLT 195
           G  + E++T
Sbjct: 226 GVTMWEIMT 234

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 8e-08
 Identities = 40/323 (12%), Positives = 95/323 (29%), Gaps = 76/323 (23%)

Query: 8   RKSLEKAEKRKF-----MLGNGKILLEKLIASSNG--KHNPIRSF--SADELKTATDDFD 58
           R++L +    K      +LG+GK  +   +  S         + F  +     +     +
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200

Query: 59  GGKVIMKCLFYKLYKGFLQ--DRPISV-MKFEDTFP-----FSVSKLKIAIEI------A 104
               +++ L Y++   +    D   ++ ++                 +  + +      A
Sbjct: 201 ----MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256

Query: 105 SAVAYLHVGFSRPVV-SRDIKPTTIV----------------LQEENVAQLFDFTLSLSI 147
            A    ++   + ++ +R  + T  +                L  + V  L    L    
Sbjct: 257 KAWNAFNLS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 148 ---PEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSH 204
              P      N   R +        +   T D  +  +      ++       + S  + 
Sbjct: 316 QDLPREVLTTNP--RRLSIIAESIRDGLATWDNWKHVNCDKLTTII-------ESSL-NV 365

Query: 205 FDDGEDYRL-QDLVKKYIENESFKEIVD-PAIVGEEGLMWPEKEQQ--LLICTELAFKCL 260
            +  E  ++   L    +    F      P I+    L+W +  +   +++  +L    L
Sbjct: 366 LEPAEYRKMFDRLS---V----FPPSAHIPTILLS--LIWFDVIKSDVMVVVNKLHKYSL 416

Query: 261 SESEGDRPTIVQVAKQLRQIYQS 283
            E +    TI      +  IY  
Sbjct: 417 VEKQPKESTI-----SIPSIYLE 434

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 4e-04
 Identities = 52/328 (15%), Positives = 99/328 (30%), Gaps = 100/328 (30%)

Query: 1   MGSCLRSRKSLEKAEKRKFMLGNGKILLEKLIASSNG-------KHNPIR-SFSADELKT 52
           + +   +  SL+            K LL K +              NP R S  A+ ++ 
Sbjct: 281 LSAATTTHISLDHHSM-TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339

Query: 53  ATDDFDG---------GKVIMKCL-------FYKLYKG---FLQDRPISVMKFEDTFPFS 93
               +D            +I   L       + K++     F     I         P  
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI---------PTI 390

Query: 94  V-SKL---KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---------QEENVAQL-- 138
           + S +    I  ++   V  LH      +V +  K +TI +         + EN   L  
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLH---KYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447

Query: 139 -----------FDFTLSLSIPEGE----THI-------------NDSNRVIGTFGFMAPE 170
                      FD    L  P  +    +HI                  V   F F+  +
Sbjct: 448 SIVDHYNIPKTFDSD-DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK 506

Query: 171 YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF--DDGEDYRLQDLVKKYIENES--- 225
            R     +  +   S    L +L   K   Y  +   +D +  RL + +  ++       
Sbjct: 507 IRHDS--TAWNASGSILNTLQQL---KF--YKPYICDNDPKYERLVNAILDFLPKIEENL 559

Query: 226 ----FKEIVDPAIVGEEGLMWPEKEQQL 249
               + +++  A++ E+  ++ E  +Q+
Sbjct: 560 ICSKYTDLLRIALMAEDEAIFEEAHKQV 587

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 16/120 (13%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGETHINDSNR 159
           + SAV YLH      +V RD+KP  ++    +E +   + DF LS     G         
Sbjct: 115 VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS-----T 166

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
             GT G++APE      +S+  D +S G +   LL G    Y   F +  + +L + +K+
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG----YPP-FYEETESKLFEKIKE 221

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 51.4 bits (124), Expect = 9e-08
 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 14/100 (14%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI-NDSNR- 159
           +I + + YLH   S  ++ RD+  + ++L      ++ DF L+       T +     + 
Sbjct: 120 QIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLA-------TQLKMPHEKH 169

Query: 160 --VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             + GT  +++PE  T      +SDV+S G +   LL G+
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 51.1 bits (123), Expect = 9e-08
 Identities = 40/194 (20%), Positives = 72/194 (37%), Gaps = 37/194 (19%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H   
Sbjct: 124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                    F   APE   T  FS  SD + FG  L E+ T  +  +             
Sbjct: 181 QEH--RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGS 231

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT----ELAFKCLSESEGDRPTI 270
             +   I+ E  +            L  PE       C      +  +C +    DRPT 
Sbjct: 232 Q-ILHKIDKEGER------------LPRPE------DCPQDIYNVMVQCWAHKPEDRPTF 272

Query: 271 VQVAKQLRQIYQSN 284
           V +   L +   ++
Sbjct: 273 VALRDFLLEAQPTD 286

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 14/104 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK  ++IA  + YL    +R  + RD+     +L+++    + DF LS  I  G+ +   
Sbjct: 150 LKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY--- 203

Query: 157 SNRVIGTFGF-----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                G         +A E      ++ KSDV++FG  + E+ T
Sbjct: 204 ---RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +  E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I       +  +
Sbjct: 121 VCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRS 174

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  T   +  K D++S G + +E++ G+
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-L 145
              F    +    A EIA  + +L    S+ ++ RD+K   ++L  E   ++ DF +   
Sbjct: 436 VGRFKEPHAVFYAA-EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +I +G T    +    GT  ++APE      + +  D ++FG LL E+L G+
Sbjct: 492 NIWDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 7/101 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            ++  +++  + YL     +  V RD+    ++L   + A++ DF LS ++   +++   
Sbjct: 113 AELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 169

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            +   G +     APE      FS +SDV+S+G  + E L+
Sbjct: 170 RSA--GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 13/109 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++   +A+L    S   + RD+     ++  +   ++ DF ++  + + +   + 
Sbjct: 107 LEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
             +      F     APE      +S KSDV++FG L+ E+ +  K+ Y
Sbjct: 164 GTK------FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           +L++     +            L +A +I+SA+ YL     +  + RD+     ++ E +
Sbjct: 99  YLRECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENH 148

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALL 190
           + ++ DF LS  +       +   +      F     APE      FS KSDV++FG LL
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAK------FPIKWTAPESLAYNKFSIKSDVWAFGVLL 202

Query: 191 LELLTGKKISY 201
            E+ T     Y
Sbjct: 203 WEIATYGMSPY 213

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 16/125 (12%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHI 154
           +I  ++ S + Y+H      +V RD+KP  I+L+   ++   ++ DF LS    +     
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM- 180

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                 IGT  ++APE    G + EK DV+S G +L  LL+G     +  F    +Y + 
Sbjct: 181 ---KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG-----TPPFYGKNEYDIL 231

Query: 215 DLVKK 219
             V+ 
Sbjct: 232 KRVET 236

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 13/109 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L++  ++  A+ YL    S+  + RD+     ++ ++ V ++ DF LS  + + E   + 
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
            ++      F      PE      FS KSD+++FG L+ E+ +  K+ Y
Sbjct: 180 GSK------FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +++  +++  + YL        V RD+    ++L  ++ A++ DF LS ++   E +   
Sbjct: 120 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY-- 174

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
             +  G +     APE      FS KSDV+SFG L+ E  +
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 19/134 (14%)

Query: 73  KGFLQD-RPISVMKFEDTFPFSVSKL------KIAIEIASAVAYLHVGFSRPVVSRDIKP 125
             FL+   P +++  +     +  +L       IA +IAS + YL    S+  V RD+  
Sbjct: 105 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLAT 161

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF----MAPEYRTTGDFSEKS 181
              ++    + ++ DF +S  +   + +     RV G        M PE      F+ +S
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTES 216

Query: 182 DVYSFGALLLELLT 195
           DV+SFG +L E+ T
Sbjct: 217 DVWSFGVILWEIFT 230

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 14/105 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +   +++A  + YL     +  V RD+     +L E    ++ DF L+  I +      +
Sbjct: 127 ISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILD-----RE 178

Query: 157 SNRVIGTFG------FMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
              V           + A E   T  F+ KSDV+SFG LL ELLT
Sbjct: 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           +   +  A+AYLH   ++ V+ RDIK  +I+L  +   +L DF     I +    +    
Sbjct: 146 VCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK---DVPKRK 199

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            ++GT  +MAPE  +   ++ + D++S G +++E++ G+
Sbjct: 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-L 145
           +   P   ++   A EI+ A+ YLH    R ++ RD+K   ++L  E   +L D+ +   
Sbjct: 147 QRKLPEEHARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK---KISYS 202
            +  G+T    ++   GT  ++APE     D+    D ++ G L+ E++ G+    I  S
Sbjct: 203 GLRPGDT----TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258

Query: 203 SHFDDGEDYRLQDLVKKYIENESFKEIV 230
           S   D              E+  F+ I+
Sbjct: 259 SDNPDQNT-----------EDYLFQVIL 275

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + +   +   
Sbjct: 119 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
             ++     +MAPE      F+  SDV+ FG  + E+L 
Sbjct: 176 KGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 12/103 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  + ++A  +A+L    S+  + RD+    I+L    + ++ DF L+  I     ++  
Sbjct: 148 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            N            MAPE      ++ +SDV+S+G  L EL +
Sbjct: 205 GNAR-----LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 11/98 (11%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDSN 158
           I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G        
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----K 175

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            + GT  F+APE         ++D++S G +   LL+G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSN 158
           +I +A+ +LH   S  +  RD+KP  ++     ++ V +L DF  +    +         
Sbjct: 136 DIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ----- 187

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
               T  ++APE      + +  D++S G ++  LL G
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-L 145
              F    +    A EIA  + +L    S+ ++ RD+K   ++L  E   ++ DF +   
Sbjct: 115 VGRFKEPHAVFYAA-EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +I +G T    +    GT  ++APE      + +  D ++FG LL E+L G+
Sbjct: 171 NIWDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 20/123 (16%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           +L+ R  SV+  +         LK ++++  A+ YL        V RD+    +++ E+N
Sbjct: 277 YLRSRGRSVLGGDC-------LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDN 326

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLE 192
           VA++ DF L+            S +  G       APE      FS KSDV+SFG LL E
Sbjct: 327 VAKVSDFGLTKEA--------SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 378

Query: 193 LLT 195
           + +
Sbjct: 379 IYS 381

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 13/100 (13%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           +  AV++LH   +  +V RD+KP  I+L +    +L DF  S  +  GE        + G
Sbjct: 209 LLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL----RELCG 261

Query: 163 TFGFMAPE------YRTTGDFSEKSDVYSFGALLLELLTG 196
           T G++APE        T   + ++ D+++ G +L  LL G
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-L 145
           +   P   ++   A EI+ A+ YLH    R ++ RD+K   ++L  E   +L D+ +   
Sbjct: 104 QRKLPEEHARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK---KISYS 202
            +  G+T    ++   GT  ++APE     D+    D ++ G L+ E++ G+    I  S
Sbjct: 160 GLRPGDT----TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215

Query: 203 SHFDDGEDYRLQDLVKKYIENESFKEIV 230
           S   D              E+  F+ I+
Sbjct: 216 SDNPDQNT-----------EDYLFQVIL 232

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-- 159
           +I     YLH      V+ RD+K   + L E+   ++ DF L+  +        D  R  
Sbjct: 149 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE------YDGERKK 199

Query: 160 -VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            + GT  ++APE  +    S + DV+S G ++  LL GK
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +   +++A  + +L    S+  V RD+     +L E+   ++ DF L+  + +      +
Sbjct: 195 IGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-----KE 246

Query: 157 SNRVIGTFG------FMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            + V    G      +MA E   T  F+ KSDV+SFG LL EL+T
Sbjct: 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 9/97 (9%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQL--FDFTLSLSIPEGETHINDSNR 159
           + SAV+++H      VV RD+KP  ++   E +  ++   DF  +   P     +     
Sbjct: 115 LVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--- 168

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
              T  + APE      + E  D++S G +L  +L+G
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVA-QLFDFTLSLSIPEGETHINDSNR 159
           I  AV + H      VV R++KP  ++L  + +  A +L DF L++ +   +        
Sbjct: 119 ILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--- 172

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
             GT G+++PE      + +  D+++ G +L  LL G        F D + +RL   +K 
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG-----YPPFWDEDQHRLYQQIKA 227

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 102 EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR-- 159
           +I     YLH      V+ RD+K   + L E+   ++ DF L+  +        D  R  
Sbjct: 123 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE------YDGERKK 173

Query: 160 -VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            + GT  ++APE  +    S + DV+S G ++  LL GK
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 9/112 (8%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-L 145
           E  F    ++   A EI SA+ YLH   SR VV RDIK   ++L ++   ++ DF L   
Sbjct: 99  ERVFTEERARFYGA-EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 154

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            I +G T         GT  ++APE     D+    D +  G ++ E++ G+
Sbjct: 155 GISDGAT----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL--FDFTLSLSIPEGETHINDSNRV 160
           +   + ++H       V  D+KP  I+   +   +L   DF L+  +   ++        
Sbjct: 264 VCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV----KVT 316

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            GT  F APE          +D++S G L   LL+G
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQL--FDFTLSLSIPEGETHINDSNR 159
           I  A+ Y H      ++ RD+KP  ++L  +EN A +    F +++ + E          
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG--- 192

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            +GT  FMAPE      + +  DV+  G +L  LL+G
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 18/133 (13%)

Query: 73  KGFLQDRPISVMKFEDTFPFSVSKL------KIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
             FL+               +   L       +A ++A+ + YL        V RD+   
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATR 187

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF----MAPEYRTTGDFSEKSD 182
             ++ +  V ++ DF +S  I   + +     RV G        M PE      F+ +SD
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYY-----RVGGRTMLPIRWMPPESILYRKFTTESD 242

Query: 183 VYSFGALLLELLT 195
           V+SFG +L E+ T
Sbjct: 243 VWSFGVVLWEIFT 255

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 9/96 (9%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL--FDFTLSLSIPEGETHINDSNRV 160
               + ++H      +V  DIKP  I+ + +  + +   DF L+  +   E         
Sbjct: 158 ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV----KVT 210

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
             T  F APE          +D+++ G L   LL+G
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 99  IAI---EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           IA         + YLH       + RDIK   I+L  E  A+L DF ++  + +    + 
Sbjct: 127 IATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT---MA 180

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
             N VIGT  +MAPE      ++  +D++S G   +E+  GK
Sbjct: 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 13/103 (12%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  +++I  A+AYL    S   V RDI    I++      +L DF LS  I + + +   
Sbjct: 116 VLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
             R           M+PE      F+  SDV+ F   + E+L+
Sbjct: 173 VTR------LPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 15/120 (12%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVA-QLFDFTLSLSIPEGETHINDSNR 159
           I  ++AY H   S  +V R++KP  ++L  + +  A +L DF L++ + + E      + 
Sbjct: 137 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW----HG 189

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
             GT G+++PE      +S+  D+++ G +L  LL G    Y   F D + +RL   +K 
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG----YPP-FWDEDQHRLYAQIKA 244

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           L + + K                F  + ++   A EI SA+ +LH    + ++ RD+K  
Sbjct: 111 LMFHIQK-------------SRRFDEARARFYAA-EIISALMFLH---DKGIIYRDLKLD 153

Query: 127 TIVLQEENVAQLFDFTLS-LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYS 185
            ++L  E   +L DF +    I  G T    +    GT  ++APE      +    D ++
Sbjct: 154 NVLLDHEGHCKLADFGMCKEGICNGVT----TATFCGTPDYIAPEILQEMLYGPAVDWWA 209

Query: 186 FGALLLELLTGK 197
            G LL E+L G 
Sbjct: 210 MGVLLYEMLCGH 221

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 15/106 (14%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQL--FDFTLSLSIPEGETHINDSNR 159
           +ASA+ +LH   ++ +  RD+KP  I+ +    V+ +   DF L   I         S  
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176

Query: 160 ----VIGTFGFMAPE-----YRTTGDFSEKSDVYSFGALLLELLTG 196
                 G+  +MAPE           + ++ D++S G +L  LL+G
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 11/98 (11%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDSN 158
           I   V YLH   S+ +   D+KP  I+L ++NV      L DF ++  I  G        
Sbjct: 117 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----K 169

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            + GT  F+APE         ++D++S G +   LL+G
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +   + + + YL        V RD+    +++    V ++ DF LS  + +       
Sbjct: 154 VGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           +    G       APE      FS  SDV+SFG ++ E+L 
Sbjct: 211 TTG--GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 22/132 (16%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           LFY L +             E  F    ++   A EIASA+ YLH   S  +V RD+KP 
Sbjct: 126 LFYHLQR-------------ERCFLEPRARFYAA-EIASALGYLH---SLNIVYRDLKPE 168

Query: 127 TIVLQEENVAQLFDFTLS-LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYS 185
            I+L  +    L DF L   +I    T    ++   GT  ++APE      +    D + 
Sbjct: 169 NILLDSQGHIVLTDFGLCKENIEHNST----TSTFCGTPEYLAPEVLHKQPYDRTVDWWC 224

Query: 186 FGALLLELLTGK 197
            GA+L E+L G 
Sbjct: 225 LGAVLYEMLYGL 236

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVAQL--FDFTLSLSIPEGETHINDSN 158
           I   V YLH   ++ VV RD+KP+ I+   +  N   +   DF  +  +      +    
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT-- 179

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
               T  F+APE      +    D++S G LL  +LTG
Sbjct: 180 -PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 9/96 (9%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL--FDFTLSLSIPEGETHINDSNRV 160
           +  A+ +LH   S  +   DI+P  I+ Q    + +   +F  +  +  G+        +
Sbjct: 111 VCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF----RLL 163

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
                + APE       S  +D++S G L+  LL+G
Sbjct: 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.3 bits (116), Expect = 9e-07
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 15/120 (12%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVA-QLFDFTLSLSIPEGETHINDSNR 159
           I  ++AY H   S  +V R++KP  ++L  + +  A +L DF L++ + + E      + 
Sbjct: 114 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW----HG 166

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK 219
             GT G+++PE      +S+  D+++ G +L  LL G    Y   F D + +RL   +K 
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG----YPP-FWDEDQHRLYAQIKA 221

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)

Query: 87  EDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS-L 145
              F  S +    A EI   + +LH   S+ +V RD+K   I+L ++   ++ DF +   
Sbjct: 112 CHKFDLSRATFYAA-EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167

Query: 146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           ++         +N   GT  ++APE      ++   D +SFG LL E+L G
Sbjct: 168 NMLGDAK----TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 14/104 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  + ++A  +A+L    S+  + RD+    ++L   +VA++ DF L+  I      +ND
Sbjct: 167 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MND 217

Query: 157 SNRVIGTFGF-----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           SN ++          MAPE      ++ +SDV+S+G LL E+ +
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ--EENVAQL--FDFTLSLSIPEGETHINDSN 158
           I   V YLH   ++ +   D+KP  I+L      +  +   DF L+  I +G        
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----K 176

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            + GT  F+APE         ++D++S G +   LL+G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 10/97 (10%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSNR 159
           I  A+ YLH   S  +  RD+KP  ++        + +L DF  +       +       
Sbjct: 170 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL----TT 222

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
              T  ++APE      + +  D++S G ++  LL G
Sbjct: 223 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 12/103 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           +N            MAPE      ++ +SDV+SFG LL E+ T
Sbjct: 251 TNGR-----LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 16/105 (15%)

Query: 99  IAI---EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           IA         +AYLH   S  ++ RD+K   I+L E  + +L DF  +       + + 
Sbjct: 156 IAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA-------SIMA 205

Query: 156 DSNRVIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLELLTGK 197
            +N  +GT  +MAPE       G +  K DV+S G   +EL   K
Sbjct: 206 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 73  KGFLQD-RPISVMKFEDTFPFSVSKL------KIAIEIASAVAYLHVGFSRPVVSRDIKP 125
             +L+  R   V             L        + ++A  + +L    SR  + RD+  
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 176

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF-----MAPEYRTTGDFSEK 180
             I+L E+NV ++ DF L+  I        D + V           MAPE      ++ +
Sbjct: 177 RNILLSEKNVVKICDFGLARDI------YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 230

Query: 181 SDVYSFGALLLELLT 195
           SDV+SFG LL E+ +
Sbjct: 231 SDVWSFGVLLWEIFS 245

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 11/98 (11%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGETHINDSN 158
           I   V YLH   ++ +   D+KP  I+L ++N+      L DF L+  I +G        
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----K 176

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            + GT  F+APE         ++D++S G +   LL+G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           +   + YLH    + ++ RDIKP+ +++ E+   ++ DF +S      +  ++++    G
Sbjct: 146 LIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV---G 199

Query: 163 TFGFMAPE--YRTTGDFS-EKSDVYSFGALLLELLTGK 197
           T  FMAPE    T   FS +  DV++ G  L   + G+
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 20/123 (16%)

Query: 75  FLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN 134
           +L+ R  SV+  +         LK ++++  A+ YL        V RD+    +++ E+N
Sbjct: 105 YLRSRGRSVLGGDCL-------LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDN 154

Query: 135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLE 192
           VA++ DF L+      E          G       APE      FS KSDV+SFG LL E
Sbjct: 155 VAKVSDFGLT-----KEASSTQDT---GKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 206

Query: 193 LLT 195
           + +
Sbjct: 207 IYS 209

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVAQLFDFTLSLSIPEGETHINDSNRVI 161
           + +A+ + H   SR VV RDIK   I++      A+L DF     + +      D     
Sbjct: 148 VVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----- 199

Query: 162 GTFGFMAPEY-RTTGDFSEKSDVYSFGALLLELLTG 196
           GT  +  PE+       +  + V+S G LL +++ G
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 35/143 (24%), Positives = 53/143 (37%), Gaps = 41/143 (28%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           LF  L +              + F     ++ +  EI  A+ +LH      ++ RDIK  
Sbjct: 146 LFTHLSQ-------------RERFTEHEVQIYVG-EIVLALEHLH---KLGIIYRDIKLE 188

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTF-G---FMAPE--------YRTT 174
            I+L       L DF LS      +  + D       F G   +MAP+        +   
Sbjct: 189 NILLDSNGHVVLTDFGLS------KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA 242

Query: 175 GDFSEKSDVYSFGALLLELLTGK 197
            D+      +S G L+ ELLTG 
Sbjct: 243 VDW------WSLGVLMYELLTGA 259

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 7/101 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +   IAS + YL        V RD+    I++    V ++ DF L   + +       
Sbjct: 150 VGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206

Query: 157 SNRVIGTFGF--MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           +    G       +PE      F+  SDV+S+G +L E+++
Sbjct: 207 TRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 17/123 (13%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSNR 159
           +  AV YLH      ++ RD+KP  ++L    E+ + ++ DF  S  + E          
Sbjct: 248 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM----RT 300

Query: 160 VIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           + GT  ++APE      T  ++   D +S G +L   L+G    Y    +      L+D 
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----YPPFSEHRTQVSLKDQ 356

Query: 217 VKK 219
           +  
Sbjct: 357 ITS 359

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 9/96 (9%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL--FDFTLSLSIPEGETHINDSNRV 160
           I   + ++H      ++  D+KP  I+    +  Q+   DF L+      E         
Sbjct: 196 ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL----KVN 248

Query: 161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            GT  F+APE       S  +D++S G +   LL+G
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +   IA+ + YL    +   V RD+    I++    V ++ DF LS  + +       
Sbjct: 150 VGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 206

Query: 157 SNRVIGTF--GFMAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           ++   G     + APE  +   F+  SDV+SFG ++ E++T
Sbjct: 207 TSG--GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHINDSNR 159
           I   V YLH      +V  D+KP  I+L         ++ DF +S  I            
Sbjct: 140 ILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL----RE 192

Query: 160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
           ++GT  ++APE       +  +D+++ G +   LLT 
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 19/134 (14%)

Query: 73  KGFLQD-RPISVMKFEDTFPFSVSKL------KIAIEIASAVAYLHVGFSRPVVSRDIKP 125
           + +L+  RP  +    D       ++          ++A  + YL    S+  + RD+  
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF----MAPEYRTTGDFSEKS 181
             +++ E NV ++ DF L+  I   + +   +N            MAPE      ++ +S
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR-----LPVKWMAPEALFDRVYTHQS 240

Query: 182 DVYSFGALLLELLT 195
           DV+SFG L+ E+ T
Sbjct: 241 DVWSFGVLMWEIFT 254

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 14/107 (13%)

Query: 99  IAI---EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           IA    EI   +++LH      V+ RDIK   ++L E    +L DF +S  +      + 
Sbjct: 131 IAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---VG 184

Query: 156 DSNRVIGTFGFMAPE-----YRTTGDFSEKSDVYSFGALLLELLTGK 197
             N  IGT  +MAPE           +  KSD++S G   +E+  G 
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 73  KGFLQD-RPISVMKFEDTFPFSVSKLK------IAIEIASAVAYLHVGFSRPVVSRDIKP 125
             FL    P S +   D      S L+      +  +IA+ + YL    S  VV +D+  
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLAT 156

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF-----MAPEYRTTGDFSEK 180
             +++ ++   ++ D  L   +   + +       +          MAPE    G FS  
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYY------KLLGNSLLPIRWMAPEAIMYGKFSID 210

Query: 181 SDVYSFGALLLELLT 195
           SD++S+G +L E+ +
Sbjct: 211 SDIWSYGVVLWEVFS 225

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 12/103 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A ++A  + +L     +  V RD+    +++    V ++ DF L+  I     ++  
Sbjct: 175 LCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 231

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
            N            MAPE    G ++ KSDV+S+G LL E+ +
Sbjct: 232 GNAR-----LPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
               +I SAV Y H    + +V RD+K   ++L  +   ++ DF  S     G       
Sbjct: 118 SKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK----L 170

Query: 158 NRVIGTFGFMAPEYRTTGDFSE--KSDVYSFGALLLELLTGK 197
           +   G   + APE    G   +  + DV+S G +L  L++G 
Sbjct: 171 DAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGS 211

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 10/111 (9%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
            P   ++   A E+  A+  +H   S   + RD+KP  ++L +    +L DF   + + +
Sbjct: 165 VPEKWARFYTA-EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220

Query: 150 GETHINDSNRVIGTFGFMAPE----YRTTGDFSEKSDVYSFGALLLELLTG 196
                   +  +GT  +++PE        G +  + D +S G  L E+L G
Sbjct: 221 EGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 32/148 (21%)

Query: 90  FPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE 149
           F    ++   A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +  +  
Sbjct: 138 FSEPHARFYAA-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

Query: 150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG------------- 196
                  +  + GT   +APE   +  +++  D ++ G L+ E+  G             
Sbjct: 194 R------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247

Query: 197 -----KKISYSSHFDDGEDYRLQDLVKK 219
                 K+ + SHF       L+DL++ 
Sbjct: 248 EKIVSGKVRFPSHFSS----DLKDLLRN 271

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 23/133 (17%)

Query: 73  KGFLQD-RPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           K FL++ RP    +       ++  L  +A +IA    YL        + RDI     +L
Sbjct: 121 KSFLRETRP----RPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 173

Query: 131 Q---EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF-----MAPEYRTTGDFSEKSD 182
                  VA++ DF ++  I     +        G         M PE    G F+ K+D
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYY------RKGGCAMLPVKWMPPEAFMEGIFTSKTD 227

Query: 183 VYSFGALLLELLT 195
            +SFG LL E+ +
Sbjct: 228 TWSFGVLLWEIFS 240

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 13/100 (13%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVA-QLFDFTLSLSIPEGETHINDSNR 159
           +  AV YLH      ++ RD+KP  ++L  QEE+   ++ DF  S  + E          
Sbjct: 123 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM----RT 175

Query: 160 VIGTFGFMAPE---YRTTGDFSEKSDVYSFGALLLELLTG 196
           + GT  ++APE      T  ++   D +S G +L   L+G
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 23/133 (17%)

Query: 73  KGFLQD-RPISVMKFEDTFPFSVSKL-KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL 130
           K FL++ RP    +       ++  L  +A +IA    YL        + RDI     +L
Sbjct: 162 KSFLRETRP----RPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 214

Query: 131 Q---EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF-----MAPEYRTTGDFSEKSD 182
                  VA++ DF ++  I     +        G         M PE    G F+ K+D
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYY------RKGGCAMLPVKWMPPEAFMEGIFTSKTD 268

Query: 183 VYSFGALLLELLT 195
            +SFG LL E+ +
Sbjct: 269 TWSFGVLLWEIFS 281

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 12/98 (12%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEE--NVAQLFDFTLSLSIPEGETHINDSNRV 160
           +  AV + H   +  V+ RDIK   I++      + +L DF     + +      D    
Sbjct: 158 VLEAVRHCH---NCGVLHRDIKDENILIDLNRGEL-KLIDFGSGALLKDTVYTDFD---- 209

Query: 161 IGTFGFMAPEY-RTTGDFSEKSDVYSFGALLLELLTGK 197
            GT  +  PE+ R        + V+S G LL +++ G 
Sbjct: 210 -GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 19/134 (14%)

Query: 73  KGFLQD-RPISVMKFEDTFPFSVSKL------KIAIEIASAVAYLHVGFSRPVVSRDIKP 125
           + +L+  RP  +    D       ++          ++A  + YL    S+  + RD+  
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 231

Query: 126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGF----MAPEYRTTGDFSEKS 181
             +++ E NV ++ DF L+  I   + +   +N            MAPE      ++ +S
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR-----LPVKWMAPEALFDRVYTHQS 286

Query: 182 DVYSFGALLLELLT 195
           DV+SFG L+ E+ T
Sbjct: 287 DVWSFGVLMWEIFT 300

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 18/100 (18%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           + SAV YL     + ++ RDIK   IV+ E+   +L DF  +  +  G+          G
Sbjct: 139 LVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL----FYTFCG 191

Query: 163 TFGFMAPE------YRTTGDFSEKSDVYSFGALLLELLTG 196
           T  + APE      YR       + +++S G  L  L+  
Sbjct: 192 TIEYCAPEVLMGNPYR-----GPELEMWSLGVTLYTLVFE 226

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A +I+  + YL       +V RD+    I++ E    ++ DF LS  + E ++++  
Sbjct: 153 ISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209

Query: 157 SNRVIGTFGF----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
           S             MA E      ++ +SDV+SFG LL E++T
Sbjct: 210 SQGR-----IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 14/104 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L IA ++A+ +AYL     R  V RD+     ++ E  V ++ DF LS +I   + +   
Sbjct: 177 LCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY--- 230

Query: 157 SNRVIGTFGF-----MAPEYRTTGDFSEKSDVYSFGALLLELLT 195
                          M PE      ++ +SDV+++G +L E+ +
Sbjct: 231 ---KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 19/117 (16%), Positives = 44/117 (37%), Gaps = 23/117 (19%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDI--------KPTTIVLQEENVAQLFDFTLSLSI 147
           KL++A ++A+A+ +L       ++  ++        +            +L D  +S+++
Sbjct: 115 KLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171

Query: 148 PEGETHINDSNRVIGTFGF--MAPE-YRTTGDFSEKSDVYSFGALLLELLTGKKISY 201
              +         I       + PE      + +  +D +SFG  L E+ +G     
Sbjct: 172 LPKD---------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL 219

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 14/107 (13%)

Query: 99  IAI---EIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
           I +   ++  A+ +LH   S+ ++ RD+K   +++  E   +L DF +S    +    + 
Sbjct: 119 IQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---LQ 172

Query: 156 DSNRVIGTFGFMAPE-----YRTTGDFSEKSDVYSFGALLLELLTGK 197
             +  IGT  +MAPE           +  K+D++S G  L+E+   +
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 27/102 (26%)

Query: 106 AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFG 165
            + +LH   S  ++ RD+KP+ IV++ +   ++ DF L+              R  GT  
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGTSF 218

Query: 166 FM----------APEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            M          APE      + E  D++S G ++ E++  K
Sbjct: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 27/102 (26%)

Query: 106 AVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFG 165
            + +LH   S  ++ RD+KP+ IV++ +   ++ DF L+              R  GT  
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGTSF 181

Query: 166 FM----------APEYRTTGDFSEKSDVYSFGALLLELLTGK 197
            M          APE      + E  D++S G ++ E++ G 
Sbjct: 182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 45/171 (26%)

Query: 67  LFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPT 126
           LF  L K                FP  V+K   A E+  A+ YLH   S+ ++ RD+KP 
Sbjct: 93  LFSLLRK-------------SQRFPNPVAKFYAA-EVCLALEYLH---SKDIIYRDLKPE 135

Query: 127 TIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSF 186
            I+L +    ++ DF  +  +P+       +  + GT  ++APE  +T  +++  D +SF
Sbjct: 136 NILLDKNGHIKITDFGFAKYVPDV------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSF 189

Query: 187 GALLLELLTG------------------KKISYSSHFDDGEDYRLQDLVKK 219
           G L+ E+L G                   ++ +   F++     ++DL+ +
Sbjct: 190 GILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNE----DVKDLLSR 236

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 23/107 (21%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A ++A  + YL     +  + RD+    I++ E  VA++ DF LS            
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---------GQ 192

Query: 157 SNRVIGTFGF-----MAPE---YRTTGDFSEKSDVYSFGALLLELLT 195
              V  T G      MA E   Y     ++  SDV+S+G LL E+++
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSV---YTTNSDVWSYGVLLWEIVS 236

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 25/94 (26%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           I  A+ YLH   S  +  RD+KP       EN+  L+            +   ++   + 
Sbjct: 126 IGEAIQYLH---SINIAHRDVKP-------ENL--LY-----------TSKRPNAILKLT 162

Query: 163 TFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTG 196
            FGF A E      + +  D++S G ++  LL G
Sbjct: 163 DFGF-AKETTGEK-YDKSCDMWSLGVIMYILLCG 194

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 29/135 (21%)

Query: 73  KGFLQDRPISVMKFEDTFPFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ 131
            G L +  +          F++S++K +   + + + Y+H      ++ RD+K   +++ 
Sbjct: 111 AGLLSNVLV---------KFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLIT 158

Query: 132 EENVAQLFDFTL--SLSIPEGETHINDSNRVIGTFGFMAPE-------YRTTGDFSEKSD 182
            + V +L DF L  + S+ +       +NRV+ T  +  PE       Y          D
Sbjct: 159 RDGVLKLADFGLARAFSLAKNSQPNRYTNRVV-TLWYRPPELLLGERDY------GPPID 211

Query: 183 VYSFGALLLELLTGK 197
           ++  G ++ E+ T  
Sbjct: 212 LWGAGCIMAEMWTRS 226

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 103 IASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG 162
           +   + YLH   S+ +V +DIKP  ++L      ++    ++          +      G
Sbjct: 118 LIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA-EALHPFAADDTCRTSQG 173

Query: 163 TFGFMAPE-YRTTGDFS-EKSDVYSFGALLLELLTGK 197
           +  F  PE       FS  K D++S G  L  + TG 
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	284
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.98
3uqc_A	286	Probable conserved transmembrane protein; structur	99.98
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.87
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.84
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.77
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.62
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.57
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.49
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.34
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.08
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.05
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.27
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.53
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.45
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.3
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.12
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.97
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.81
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.34
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	94.22
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.81
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	93.59
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.32
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.11
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	91.11
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	90.66
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	90.41
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	90.38
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	90.15
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	89.97
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	88.72
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	88.21
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	85.67
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	85.12
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	84.11
3mes_A	424	Choline kinase; malaria, structural genomics, stru	82.68
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	80.61

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-49  Score=334.80  Aligned_cols=204  Identities=23%  Similarity=0.319  Sum_probs=151.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC------------------------------------------CCC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------------------------FPF   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------------------------~~~   92 (284)
                      +++...+.||+|+||+||+|.+.+ .||||+++..                                          ||.
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~  114 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCE  114 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCC
Confidence            456667889999999999999865 4999998643                                          221


Q ss_pred             c----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           93 S----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        93 ~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      .                ..++.++.|||.||+|||   +++||||||||+|||+++++.+||+|||+|+......... .
T Consensus       115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~-~  190 (307)
T 3omv_A          115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ-Q  190 (307)
T ss_dssp             SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce-e
Confidence            1                567889999999999999   8999999999999999999999999999998765432211 1


Q ss_pred             CCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .....||+.|||||++.+   .+|+.++|||||||++|||+||+.||....     .   ...+......+.    ..+.
T Consensus       191 ~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----~---~~~~~~~~~~~~----~~p~  258 (307)
T 3omv_A          191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----N---RDQIIFMVGRGY----ASPD  258 (307)
T ss_dssp             ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----C---HHHHHHHHHTTC----CCCC
T ss_pred             ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-----h---HHHHHHHHhcCC----CCCC
Confidence            223689999999999863   468999999999999999999999996432     1   111111111111    1111


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      +..       ....++..+.+|+.+||+.||++|||+.||++.|+.|..
T Consensus       259 ~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          259 LSK-------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             STT-------SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             ccc-------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            110       112344558899999999999999999999999998764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.1e-48  Score=330.64  Aligned_cols=218  Identities=20%  Similarity=0.303  Sum_probs=156.5

Q ss_pred             CCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------------~~   91 (284)
                      ++...+.||+|+||+||+|.++|+.||||++...                                            ||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~   83 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence            3455678999999999999999999999998654                                            22


Q ss_pred             Cc--------------hhHHHHHHHHHHHHHHhccC-----CCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           92 FS--------------VSKLKIAIEIASAVAYLHVG-----FSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        92 ~~--------------~~~~~i~~~i~~gL~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      ..              ..+++++.|++.||+|||+.     +..+||||||||+|||++.++.+||+|||+|+.......
T Consensus        84 ~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  163 (303)
T 3hmm_A           84 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD  163 (303)
T ss_dssp             TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT
T ss_pred             CCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCC
Confidence            11              56788999999999999932     123999999999999999999999999999987755433


Q ss_pred             ccc-CCCCcccCccccccccccCC------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC-------ccccHHHHHH
Q 039895          153 HIN-DSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSHFDDG-------EDYRLQDLVK  218 (284)
Q Consensus       153 ~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~-------~~~~~~~~~~  218 (284)
                      ... ......||+.|||||++.+.      .++.++|||||||++|||+||..|+........       ..........
T Consensus       164 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  243 (303)
T 3hmm_A          164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK  243 (303)
T ss_dssp             EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH
T ss_pred             ceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHH
Confidence            221 22236799999999998754      367899999999999999999887643221100       0111122111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                       ......    .+|.+...     ....+++..+.+|+.+||+.||++||||.||++.|++|.++
T Consensus       244 -~~~~~~----~rp~~p~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          244 -VVCEQK----LRPNIPNR-----WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             -HHTTSC----CCCCCCGG-----GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -HHhccc----CCCCCCcc-----ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence             111111    11111110     11235566788999999999999999999999999999764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=5.5e-49  Score=332.59  Aligned_cols=201  Identities=20%  Similarity=0.274  Sum_probs=155.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+       ++..||||++...                                      
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            4566678999999999999986       3678999999754                                      


Q ss_pred             ---CCCc----------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 ---FPFS----------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ---~~~~----------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                         ||..                            ..++.++.||+.||.|||   +++||||||||+|||++.++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence               2221                            356789999999999999   899999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||+|+.......... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||....        ..+..
T Consensus       170 ~DFGla~~~~~~~~~~~-~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--------~~~~~  240 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRV-GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEVI  240 (299)
T ss_dssp             CCCSCHHHHTGGGCEEE-TTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHH
T ss_pred             CCcccceecCCCCceee-cCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHH
Confidence            99999987654433222 122568999999999999999999999999999999999 899986432        11222


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ... ..+....               .+..++..+.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       241 ~~i-~~~~~~~---------------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          241 ECI-TQGRVLQ---------------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHH-HHTCCCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHH-HcCCCCC---------------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            221 1111111               1122344588999999999999999999999999998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=8.6e-49  Score=332.72  Aligned_cols=196  Identities=23%  Similarity=0.337  Sum_probs=152.2

Q ss_pred             CCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC----------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~----------------------------------------   89 (284)
                      +...+.||+|+||+||+|.+       +++.||||++...                                        
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            33456899999999999997       4578999998654                                        


Q ss_pred             --CCCc-------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 --FPFS-------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 --~~~~-------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                        ||..                               ..++.++.|||.||.|||   +.+||||||||+|||+++++.+
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~  184 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNV  184 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCE
Confidence              2211                               246789999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~  215 (284)
                      ||+|||+++.+....... ......||+.|||||++.+..|+.++|||||||++|||+| |..||.+..        ..+
T Consensus       185 Ki~DFGlar~~~~~~~~~-~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--------~~~  255 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYK-LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--------NQD  255 (308)
T ss_dssp             EECCSCCBCGGGGGGCBC-SSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--------HHH
T ss_pred             EECCcccceeccCCCcee-EecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--------HHH
Confidence            999999998765433221 1223679999999999999999999999999999999999 888886432        122


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      .+.. +..+...               +.+..++..+.+|+.+||+.||++||||.||++.|+.+
T Consensus       256 ~~~~-i~~~~~~---------------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          256 VVEM-IRNRQVL---------------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHH-HHTTCCC---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHH-HHcCCCC---------------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            2222 1122111               11223445688999999999999999999999999875

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.9e-48  Score=332.45  Aligned_cols=201  Identities=20%  Similarity=0.238  Sum_probs=149.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      .+|...+.||+|+||+||+|.+       ++..||||++...                                      
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            3556667899999999999986       3678999999754                                      


Q ss_pred             ---CCCc------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 ---FPFS------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 ---~~~~------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                         ||..                              ..++.++.|||.||.|||   +++||||||||+|||++.++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence               2211                              346789999999999999   8999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~  215 (284)
                      ||+|||+++.+........ .....||+.|||||++.+..++.++|||||||++|||+| |+.||....        ..+
T Consensus       198 Ki~DFGla~~~~~~~~~~~-~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--------~~~  268 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRV-GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--------NTE  268 (329)
T ss_dssp             EECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--------HHH
T ss_pred             EEcccccceeccCCCccee-cCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--------HHH
Confidence            9999999987754432221 122579999999999999999999999999999999999 899986432        112


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .+.... .+...               +.+..+++.+.+|+.+||+.||++|||+.||++.|+.+.+.
T Consensus       269 ~~~~i~-~g~~~---------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          269 AIDCIT-QGREL---------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HHHHHH-HTCCC---------------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHH-cCCCC---------------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            222211 11100               01122344588999999999999999999999999999764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.5e-48  Score=329.91  Aligned_cols=203  Identities=17%  Similarity=0.145  Sum_probs=154.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------CCCc---
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------FPFS---   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------~~~~---   93 (284)
                      +.|...+.||+|+||.||+|.+  +|+.||||++...                                    ||..   
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L  137 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL  137 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence            4566677899999999999998  7999999999755                                    2221   


Q ss_pred             ------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCCCCccc--cCCC
Q 039895           94 ------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHI--NDSN  158 (284)
Q Consensus        94 ------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~~--~~~~  158 (284)
                                  .....++.||+.||.|||   +++||||||||+|||++.+| .+||+|||+|+.+.......  ....
T Consensus       138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~  214 (336)
T 4g3f_A          138 GQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD  214 (336)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence                        567789999999999999   99999999999999999998 59999999998875432211  1223


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ..+||+.|||||++.+..|+.++|||||||++|||++|..||.....     ..+...+..  ....+.+          
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~~i~~--~~~~~~~----------  277 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-----GPLCLKIAS--EPPPIRE----------  277 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-----SCCHHHHHH--SCCGGGG----------
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHHHc--CCCCchh----------
Confidence            36799999999999999999999999999999999999999975431     111111111  0101111          


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                           .+...++.+.+|+.+||+.||++|||+.|+++.|...++
T Consensus       278 -----~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          278 -----IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             -----SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence                 012233457899999999999999999999999988764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=9.9e-49  Score=337.97  Aligned_cols=211  Identities=21%  Similarity=0.308  Sum_probs=163.1

Q ss_pred             HHHHHHHhcCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC------------------------------
Q 039895           47 ADELKTATDDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT------------------------------   89 (284)
Q Consensus        47 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~------------------------------   89 (284)
                      ..+++...++|...+.||+|+||+||+|.+.       ++.||||++...                              
T Consensus        56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g  135 (353)
T 4ase_A           56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG  135 (353)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence            3445445577888899999999999999972       257999998654                              


Q ss_pred             --------------CCCc-------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccc
Q 039895           90 --------------FPFS-------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIK  124 (284)
Q Consensus        90 --------------~~~~-------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlk  124 (284)
                                    ||..                               ..++.++.|||.||.|||   +++|||||||
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK  212 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA  212 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccC
Confidence                          2211                               345689999999999999   9999999999


Q ss_pred             cCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 039895          125 PTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSS  203 (284)
Q Consensus       125 p~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~  203 (284)
                      |+|||+++++.+||+|||+|+.+........ .....||+.|||||++.+..|+.++|||||||++|||+| |..||...
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~-~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~  291 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  291 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEE-ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCcee-eccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999988765443222 123678999999999999999999999999999999998 89998653


Q ss_pred             CCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .    ....+..    .+..+....               .+..+++.+.+++.+||+.||++|||+.||+++|++++++
T Consensus       292 ~----~~~~~~~----~i~~g~~~~---------------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          292 K----IDEEFCR----RLKEGTRMR---------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             C----CSHHHHH----HHHHTCCCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             C----HHHHHHH----HHHcCCCCC---------------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            2    1111111    111111111               1122334588999999999999999999999999999886


Q ss_pred             C
Q 039895          284 N  284 (284)
Q Consensus       284 ~  284 (284)
                      |
T Consensus       349 ~  349 (353)
T 4ase_A          349 N  349 (353)
T ss_dssp             T
T ss_pred             h
Confidence            5

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.6e-47  Score=325.19  Aligned_cols=193  Identities=18%  Similarity=0.248  Sum_probs=152.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ..|+..+.||+|+||+||+|.+  +|+.||||++...                                         ||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            3477778899999999999999  7999999998643                                         22


Q ss_pred             Cc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 FS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 ~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                      ..              .....++.||+.||.|||   +++||||||||+|||++.+|.+||+|||+|+.+......   .
T Consensus       154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~---~  227 (346)
T 4fih_A          154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---R  227 (346)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC---B
T ss_pred             CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc---c
Confidence            21              567789999999999999   999999999999999999999999999999887544322   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      .+.+||+.|||||++.+..|+.++|||||||++|||++|..||....        ............ ...     +   
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~-~~~-----~---  290 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRDNL-PPR-----L---  290 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSS-CCC-----C---
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCC-CCC-----C---
Confidence            23689999999999999999999999999999999999999997532        111121111110 000     0   


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           +.....++.+.+|+.+||+.||++|||+.|+++
T Consensus       291 -----~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          291 -----KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             -----SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -----CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                 111223345889999999999999999999975

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.1e-46  Score=314.89  Aligned_cols=186  Identities=21%  Similarity=0.312  Sum_probs=142.2

Q ss_pred             CCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------------
Q 039895           59 GGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------------   89 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------------   89 (284)
                      ....||+|+||+||+|.+  ++..||+|++...                                               
T Consensus        30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE  109 (290)
T 3fpq_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE  109 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence            345799999999999998  7889999998643                                               


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEec-CCcceeeccccccccCCCC
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~~  151 (284)
                      +|..               .....++.||+.||+|||   +++  ||||||||+|||++. ++.+||+|||+|+......
T Consensus       110 y~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~  186 (290)
T 3fpq_A          110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence            2211               456789999999999999   777  999999999999984 7999999999997654332


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      .     .+.+||+.|||||++.+ .|+.++|||||||++|||+||+.||....       ........ ...+..+... 
T Consensus       187 ~-----~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-------~~~~~~~~-i~~~~~~~~~-  251 (290)
T 3fpq_A          187 A-----KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRR-VTSGVKPASF-  251 (290)
T ss_dssp             B-----EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHH-HTTTCCCGGG-
T ss_pred             c-----CCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------cHHHHHHH-HHcCCCCCCC-
Confidence            2     22689999999998865 69999999999999999999999996432       11111111 1111111111 


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                   +...++.+.+|+.+||+.||++|||+.|+++
T Consensus       252 -------------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          252 -------------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             -------------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -------------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                         1112234789999999999999999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.6e-47  Score=328.43  Aligned_cols=191  Identities=23%  Similarity=0.292  Sum_probs=146.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5688888999999999999998  7999999998654                                           


Q ss_pred             CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      ||..                 ...+.++.||+.||.|||   +++||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  180 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE  180 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence            2221                 356679999999999999   99999999999999999999999999999987754321


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .   ....+||+.|||||++.+..|+.++|||||||++|||++|+.||....        .......... +.++..   
T Consensus       181 ~---~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~-~~~~~~---  245 (350)
T 4b9d_A          181 L---ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--------MKNLVLKIIS-GSFPPV---  245 (350)
T ss_dssp             H---HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHH-TCCCCC---
T ss_pred             c---ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHc-CCCCCC---
Confidence            1   112579999999999999999999999999999999999999996532        2222222221 111110   


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  ....+..+.+|+.+||+.||++|||+.|+++
T Consensus       246 ------------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          246 ------------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             ------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                        1122344789999999999999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.8e-46  Score=311.56  Aligned_cols=189  Identities=20%  Similarity=0.268  Sum_probs=139.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +|+.||+|++...                                           
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999998  7999999998654                                           


Q ss_pred             -CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 -FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 -~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                       +|..              .....++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+........ 
T Consensus        93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~-  168 (275)
T 3hyh_A           93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL-  168 (275)
T ss_dssp             ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCcc-
Confidence             2211              567789999999999999   999999999999999999999999999999876543321 


Q ss_pred             cCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .+.+||+.|||||++.+..+ +.++||||+||++|||++|+.||....        ......... .+...  +   
T Consensus       169 ---~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--------~~~~~~~i~-~~~~~--~---  231 (275)
T 3hyh_A          169 ---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS-NGVYT--L---  231 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HTCCC--C---
T ss_pred             ---CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-cCCCC--C---
Confidence               22689999999999998876 579999999999999999999996432        122222221 11110  0   


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 +...++.+.+|+.+||+.||++|||+.|+++
T Consensus       232 -----------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          232 -----------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -----------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                       0112234789999999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6e-46  Score=325.76  Aligned_cols=193  Identities=19%  Similarity=0.259  Sum_probs=152.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      +.|+..+.||+|+||.||+|.+  +|+.||||++...                                         ||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            4578888999999999999999  7999999998644                                         33


Q ss_pred             Cc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 FS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 ~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                      ..              .....++.||+.||.|||   +++||||||||+||||+.+|.+||+|||+|+.+......   .
T Consensus       231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~---~  304 (423)
T 4fie_A          231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---R  304 (423)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC---B
T ss_pred             CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc---c
Confidence            22              566789999999999999   999999999999999999999999999999887543322   1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|..||....        ............ .     +.+.  
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~-~-----~~~~--  368 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRDNL-P-----PRLK--  368 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSC-C-----CCCS--
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCC-C-----CCCc--
Confidence            23789999999999999999999999999999999999999996532        112122111111 0     0000  


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       369 ------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          369 ------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             ------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                  01122344789999999999999999999976

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.9e-46  Score=316.81  Aligned_cols=191  Identities=22%  Similarity=0.337  Sum_probs=151.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5688999999999999999998  8999999998643                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+.+......
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence             2221               556779999999999999   999999999999999999999999999999887543222


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      . ...+.+||+.|||||++.+..|+.++||||+||++|||++|..||....        .......... ..+.      
T Consensus       189 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~-~~~~------  252 (311)
T 4aw0_A          189 A-RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EGLIFAKIIK-LEYD------  252 (311)
T ss_dssp             C-CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-TCCC------
T ss_pred             c-cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHc-CCCC------
Confidence            1 1223789999999999999999999999999999999999999996532        1222222211 1110      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                      +          +...++.+.+|+.+||+.||++|||+.|++
T Consensus       253 ~----------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          253 F----------PEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             C----------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             C----------CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            0          011223478999999999999999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.4e-45  Score=309.90  Aligned_cols=190  Identities=23%  Similarity=0.272  Sum_probs=146.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|..     .++.||+|++...                                        
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4688889999999999999986     4678999998643                                        


Q ss_pred             ---CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|..               .....++.||+.||+|||   +++|+||||||+|||++.+|.+||+|||+|+......
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence               2221               566789999999999999   9999999999999999999999999999998764432


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..   ..+.+||+.|||||++.+..|+.++||||+||++|||+||..||.+..        .......... ....    
T Consensus       181 ~~---~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~-~~~~----  244 (304)
T 3ubd_A          181 KK---AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTMILK-AKLG----  244 (304)
T ss_dssp             CC---CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-CCCC----
T ss_pred             cc---ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHHHHc-CCCC----
Confidence            21   123689999999999999999999999999999999999999997532        1222222211 1110    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH-----HHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI-----VQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~ev~~  275 (284)
                                  .+...++.+.+|+.+||+.||++|||+     +|+++
T Consensus       245 ------------~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          245 ------------MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             ------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             ------------CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence                        011123347899999999999999985     56654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=5.4e-45  Score=308.48  Aligned_cols=192  Identities=24%  Similarity=0.336  Sum_probs=137.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4688889999999999999998  7999999998543                                           


Q ss_pred             -----------CCCc------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeec
Q 039895           90 -----------FPFS------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        90 -----------~~~~------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                                 +|..                  ...+.++.||+.||+|||   +++|+||||||+|||++.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence                       1211                  125679999999999999   99999999999999999999999999


Q ss_pred             cccccccCCCCccc---------cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc
Q 039895          141 FTLSLSIPEGETHI---------NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY  211 (284)
Q Consensus       141 fg~a~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~  211 (284)
                      ||+|+.+.......         ...+..+||+.|||||++.+..|+.++|||||||++|||++   ||...       .
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-------~  231 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-------M  231 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-------H
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-------c
Confidence            99998875432211         11223579999999999999999999999999999999996   65321       0


Q ss_pred             cHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          212 RLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ........ .....+               ++......+.+.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~-~~~~~~---------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          232 ERVRTLTD-VRNLKF---------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHHH-HHTTCC---------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHH-HhcCCC---------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11111111 111111               1223344455678999999999999999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-43  Score=308.25  Aligned_cols=213  Identities=15%  Similarity=0.197  Sum_probs=150.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            4577778999999999999998  8999999998644                                           


Q ss_pred             ------CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ------FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ------~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                            +|..              .....++.||+.||.|||   +++||||||||+|||++.++.+||+|||+|+.+..
T Consensus       134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence                  1111              567789999999999999   99999999999999999999999999999987754


Q ss_pred             CCcc-ccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          150 GETH-INDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       150 ~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                      .... .......+||+.|||||++.+. .++.++||||+||++|||++|..||.+..     .......+..........
T Consensus       211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~-----~~~~l~~I~~~~g~p~~~  285 (398)
T 4b99_A          211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN-----YVHQLQLIMMVLGTPSPA  285 (398)
T ss_dssp             -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS-----HHHHHHHHHHHHCCCCGG
T ss_pred             CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHhcCCCChH
Confidence            3221 2222347899999999998775 46899999999999999999999997532     111222221111111100


Q ss_pred             cc--cc--------ccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          228 EI--VD--------PAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       228 ~~--~~--------~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+  ..        ..+.......+. ........+.+|+.+||..||++|||+.|+++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            00  00        000000000000 00112345789999999999999999999975

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=4.1e-43  Score=301.28  Aligned_cols=232  Identities=31%  Similarity=0.521  Sum_probs=186.1

Q ss_pred             CCcceecHHHHHHHhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC-----------------------------
Q 039895           40 NPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT-----------------------------   89 (284)
Q Consensus        40 ~~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----------------------------   89 (284)
                      ...+.|++.++..++++|...+.||+|+||.||+|.. +|+.||||++...                             
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            4578899999999999999999999999999999998 7899999998654                             


Q ss_pred             -------------CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcce
Q 039895           90 -------------FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ  137 (284)
Q Consensus        90 -------------~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k  137 (284)
                                   +|                   ....+..++.|++.||.|||+.+..+|+||||||+|||++.++.+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence                         11                   1145678999999999999932222999999999999999999999


Q ss_pred             eeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          138 LFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       138 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      |+|||++.............  ..||+.|+|||++.+..++.++|||||||++|+|++|..||...............++
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  252 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTA--VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV  252 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECC--CCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred             eccCccccccCccccccccc--ccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence            99999998775443332222  5699999999999888899999999999999999999999964332234445566666


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      .............+..+...      .....+..+.+++.+||+.||++|||+.||++.|+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          253 KGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TTTTSSCCSTTSSCTTCTTS------CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHhhchhhhhhcChhhccc------cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            55555555555555444332      245667789999999999999999999999999975

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.1e-43  Score=306.38  Aligned_cols=152  Identities=22%  Similarity=0.326  Sum_probs=123.4

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------   89 (284)
                      .+....+.|...+.||+|+||+||+|+.     .++.||+|++...                                  
T Consensus        15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            3344567899999999999999999986     3678999988654                                  


Q ss_pred             ------CCCc------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-CcceeeccccccccCCC
Q 039895           90 ------FPFS------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ------~~~~------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~~~~~~  150 (284)
                            +|..            .....++.||+.||+|||   +.+|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus        95 ~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~  171 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT  171 (361)
T ss_dssp             EEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred             EEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence                  2221            566789999999999999   9999999999999999977 79999999999866443


Q ss_pred             Cccc-------------------------cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          151 ETHI-------------------------NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       151 ~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ....                         ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            2110                         011235799999999998876 4899999999999999999999999754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.4e-42  Score=297.47  Aligned_cols=231  Identities=31%  Similarity=0.456  Sum_probs=181.3

Q ss_pred             CCcceecHHHHHHHhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC-----------------------------
Q 039895           40 NPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT-----------------------------   89 (284)
Q Consensus        40 ~~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----------------------------   89 (284)
                      .....+++.++..++++|...+.||+|+||.||+|.+ +|+.||||++...                             
T Consensus        24 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  103 (321)
T 2qkw_B           24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF  103 (321)
T ss_dssp             ------CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEE
T ss_pred             CcceeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            3445667777788899999999999999999999999 7899999987644                             


Q ss_pred             ------------CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 ------------FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ------------~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                                  +|                   ....++.++.|++.||.|||   +.+|+||||||+|||++.++.+||
T Consensus       104 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl  180 (321)
T 2qkw_B          104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKI  180 (321)
T ss_dssp             CCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEE
T ss_pred             EcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEE
Confidence                        11                   11467789999999999999   899999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      +|||++.......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....  .........+..
T Consensus       181 ~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~--~~~~~~~~~~~~  257 (321)
T 2qkw_B          181 TDFGISKKGTELDQTH-LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL--PREMVNLAEWAV  257 (321)
T ss_dssp             CCCTTCEECSSSSCCC-CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS--SSSCCCHHHHTH
T ss_pred             eecccccccccccccc-cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC--cHHHHHHHHHhh
Confidence            9999997654322211 1122568999999999988899999999999999999999999997654  233344555554


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .....+.+...+++.+...      .....+..+.+++.+||+.||++|||+.||++.|+.+.+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          258 ESHNNGQLEQIVDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHTTTCCCSSSSSSCTTC------SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hccccccHHHhcChhhccc------cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            4445555555555544322      245677789999999999999999999999999999875

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=7.4e-41  Score=284.83  Aligned_cols=229  Identities=28%  Similarity=0.440  Sum_probs=175.1

Q ss_pred             CCCcceecHHHHHHHhcCCCCC------CeeeecCCceEEEEEeCCcceEEEeecCC-----------------------
Q 039895           39 HNPIRSFSADELKTATDDFDGG------KVIMKCLFYKLYKGFLQDRPISVMKFEDT-----------------------   89 (284)
Q Consensus        39 ~~~~~~~~~~~l~~~~~~f~~~------~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----------------------   89 (284)
                      ......|++.++..++++|+..      +.||+|+||.||+|..++..||||++...                       
T Consensus         9 ~~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A            9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             --CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            3467899999999999999988      89999999999999999999999998642                       


Q ss_pred             ----------------------CCC------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEE
Q 039895           90 ----------------------FPF------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIV  129 (284)
Q Consensus        90 ----------------------~~~------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NIL  129 (284)
                                            +|.                  ...++.++.|++.||.|||   +.+|+||||||+|||
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil  165 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL  165 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEE
Confidence                                  110                  1456789999999999999   899999999999999


Q ss_pred             EecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 039895          130 LQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE  209 (284)
Q Consensus       130 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~  209 (284)
                      ++.++.+||+|||++........... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.....    
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----  239 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVM-TSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE----  239 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEE-CSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS----
T ss_pred             EcCCCcEEEeeccccccccccccccc-ccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc----
Confidence            99999999999999987654322211 122578999999998764 588999999999999999999999875331    


Q ss_pred             cccHHHHHHHHh-hcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          210 DYRLQDLVKKYI-ENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       210 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ......+..... ....+...+++.+..       .....+..+.+++.+||+.||.+|||+.+|++.|+++..|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s  307 (307)
T 2nru_A          240 PQLLLDIKEEIEDEEKTIEDYIDKKMND-------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS  307 (307)
T ss_dssp             SSBTTHHHHHHHTTSCCHHHHSCSSCSC-------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred             hHHHHHHHHHhhhhhhhhhhhccccccc-------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence            111112221111 112233333333221       2455667789999999999999999999999999998754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.2e-42  Score=315.41  Aligned_cols=190  Identities=21%  Similarity=0.279  Sum_probs=149.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...++||+|+||.||+|..  +|+.||+|++.+.                                           
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            6788899999999999999999  8999999998533                                           


Q ss_pred             ----CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ----FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ----~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                          ||..               .....++.||+.||.|||   +.+||||||||+||||+.+|.+||+|||+|+.+...
T Consensus       269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence                2221               556779999999999999   999999999999999999999999999999887544


Q ss_pred             CccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Ccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKE  228 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  228 (284)
                      ..     .+.+||+.|||||++.. ..|+.++|+||+||++|||++|..||....     .............. ..++ 
T Consensus       346 ~~-----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~-----~~~~~~i~~~i~~~~~~~p-  414 (689)
T 3v5w_A          346 KP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK-----TKDKHEIDRMTLTMAVELP-  414 (689)
T ss_dssp             CC-----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG-----CCCHHHHHHHHHHCCCCCC-
T ss_pred             CC-----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhhcCCCCCCC-
Confidence            32     23689999999999974 579999999999999999999999996432     11122222221111 1111 


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                                       ...++.+.+|+.+||+.||++|++     +.||++
T Consensus       415 -----------------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          415 -----------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             -----------------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             -----------------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                             112234789999999999999998     677754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1e-41  Score=292.41  Aligned_cols=215  Identities=22%  Similarity=0.270  Sum_probs=160.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------------~   90 (284)
                      ++|...+.||+|+||+||+|.+.++.||||++...                                            +
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~  103 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF  103 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             hhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence            67888899999999999999999999999998643                                            1


Q ss_pred             CCc--------------hhHHHHHHHHHHHHHHhccCCCC----------CeeecccccCcEEEecCCcceeeccccccc
Q 039895           91 PFS--------------VSKLKIAIEIASAVAYLHVGFSR----------PVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        91 ~~~--------------~~~~~i~~~i~~gL~~LH~~~~~----------~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      |..              ..+..++.|++.||.|||   +.          +|+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~  180 (322)
T 3soc_A          104 HEKGSLSDFLKANVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK  180 (322)
T ss_dssp             CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence            111              456789999999999999   88          999999999999999999999999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc--------ccH
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTG-----DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED--------YRL  213 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~--------~~~  213 (284)
                      ........ ......||+.|+|||++.+.     .++.++|||||||++|||++|..||..........        ...
T Consensus       181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  259 (322)
T 3soc_A          181 FEAGKSAG-DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL  259 (322)
T ss_dssp             ECTTSCCC-CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred             cccccCcc-ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence            65443321 12225789999999998763     45678999999999999999999997643211111        011


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..+...... ......+..         .......+..+.+|+.+||+.||++|||+.||++.|++|.+.
T Consensus       260 ~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          260 EDMQEVVVH-KKKRPVLRD---------YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHTT-SCCCCCCCG---------GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhc-ccCCCCccc---------cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            111111111 111100000         011234556689999999999999999999999999999764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.6e-41  Score=309.60  Aligned_cols=193  Identities=18%  Similarity=0.165  Sum_probs=152.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .++|...+.||+|+||.||+|..  +|+.||+|++...                                         +
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            36788889999999999999999  8999999998654                                         2


Q ss_pred             CCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC--CcceeeccccccccCCCCc
Q 039895           91 PFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE--NVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~--~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |..                .....++.||+.||.|||   +++|+||||||+|||++.+  +.+||+|||+++.+.....
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence            221                456789999999999999   9999999999999999854  8899999999998765443


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (284)
                      ..    ..+||+.|||||++.+..|+.++||||+||++|||++|..||.+..        ........... ..+..   
T Consensus       313 ~~----~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~---  377 (573)
T 3uto_A          313 VK----VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--------DDETLRNVKSCDWNMDD---  377 (573)
T ss_dssp             EE----EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTCCCCCS---
T ss_pred             ee----eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHhCCCCCCc---
Confidence            22    2579999999999999999999999999999999999999997533        11222211111 11111   


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 +.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       378 -----------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          378 -----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             -----------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       111122344789999999999999999999986

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=7.2e-41  Score=288.41  Aligned_cols=219  Identities=19%  Similarity=0.306  Sum_probs=160.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..+++.||||++...                                            
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~   91 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM   91 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence            367888899999999999999999999999998543                                            


Q ss_pred             -CCCc--------------hhHHHHHHHHHHHHHHhccCCCC---------CeeecccccCcEEEecCCcceeecccccc
Q 039895           90 -FPFS--------------VSKLKIAIEIASAVAYLHVGFSR---------PVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        90 -~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~---------~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                       +|..              .....++.||+.||.|||   +.         +|+||||||+|||++.++.+||+|||++.
T Consensus        92 e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~  168 (336)
T 3g2f_A           92 EYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM  168 (336)
T ss_dssp             CCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence             1111              456789999999999999   77         99999999999999999999999999998


Q ss_pred             ccCCCCcc-----ccCCCCcccCccccccccccC-------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          146 SIPEGETH-----INDSNRVIGTFGFMAPEYRTT-------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       146 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      .+......     ........||+.|+|||++.+       ..++.++|||||||++|||++|..|++............
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~  248 (336)
T 3g2f_A          169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF  248 (336)
T ss_dssp             ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred             ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence            76543211     111123579999999999876       356778999999999999999988876544222211111


Q ss_pred             HH---------HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          214 QD---------LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       214 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..         ...........        .......++.....+..+.+|+.+||+.||++|||+.|+++.|+++.+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          249 QTEVGNHPTFEDMQVLVSREKQ--------RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             HHHHCSSCCHHHHHHHHTTSCC--------CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcccCCCchHHHHHhhhccccc--------CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence            10         01111111100        0111111222345666799999999999999999999999999999853

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=5.6e-40  Score=277.72  Aligned_cols=211  Identities=16%  Similarity=0.220  Sum_probs=158.6

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------C
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------F   90 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~   90 (284)
                      ..+.|...+.||+|+||.||+|..  +++.||||++...                                        +
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            457899999999999999999997  8899999986543                                        1


Q ss_pred             C---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE---ecCCcceeeccccccccCCCCc
Q 039895           91 P---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |               ....+..++.||+.||.|||   +.+|+||||||+|||+   +.++.+||+|||++........
T Consensus        87 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           87 LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             CCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             cCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence            1               11567789999999999999   9999999999999999   7889999999999987755432


Q ss_pred             cc----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          153 HI----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       153 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ..    .......||+.|+|||++.+..++.++|||||||++|+|++|..||.....  .........+...........
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~  241 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA--ATKRQKYERISEKKMSTPIEV  241 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--SSSSSHHHHHHHHHHHSCHHH
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccch--hhhhhhhhhhhcccccchhhh
Confidence            11    112236789999999999999999999999999999999999999976431  222222222211111111000


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .               ....+..+.+++..||+.||++|||+.+|++.|+++.++
T Consensus       242 ~---------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          242 L---------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             H---------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             h---------------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence            0               011134588999999999999999999999999998864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.1e-40  Score=279.28  Aligned_cols=214  Identities=23%  Similarity=0.322  Sum_probs=158.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .++|...+.||+|+||+||+|.++|+.||||++...                                            
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e   86 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH   86 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence            467888899999999999999999999999998654                                            


Q ss_pred             CCCc--------------hhHHHHHHHHHHHHHHhccC-----CCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 FPFS--------------VSKLKIAIEIASAVAYLHVG-----FSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ~~~~--------------~~~~~i~~~i~~gL~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                      +|..              ...+.++.|++.||.|||..     ++.+|+||||||+|||++.++.+||+|||+++.....
T Consensus        87 ~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  166 (301)
T 3q4u_A           87 YHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS  166 (301)
T ss_dssp             CCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             hccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccc
Confidence            1111              56678999999999999932     1578999999999999999999999999999776543


Q ss_pred             Cccc-cCCCCcccCccccccccccCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCCCCCCCccccH
Q 039895          151 ETHI-NDSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTG----------KKISYSSHFDDGEDYRL  213 (284)
Q Consensus       151 ~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~G~il~elltg----------~~p~~~~~~~~~~~~~~  213 (284)
                      .... .......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||.......   ...
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~---~~~  243 (301)
T 3q4u_A          167 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND---PSF  243 (301)
T ss_dssp             TTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS---CCH
T ss_pred             cccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC---cch
Confidence            3322 112235799999999998876      455799999999999999999          77775433111   112


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      ................ ...         ......+..+.+|+.+||+.||++|||+.||++.|++|
T Consensus       244 ~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          244 EDMRKVVCVDQQRPNI-PNR---------WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHTTSCCCCCC-CGG---------GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhhHHHhccCCCCCC-Chh---------hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            2211111111111111 000         01234566789999999999999999999999999986

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=7.9e-40  Score=277.14  Aligned_cols=209  Identities=13%  Similarity=0.162  Sum_probs=159.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC-
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP-   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~-   91 (284)
                      ++|...+.||+|+||.||+|..  +|+.||||++...                                        +| 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~   89 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   89 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecC
Confidence            5688889999999999999997  8999999988643                                        11 


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc-----ceeeccccccccCCCCc
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV-----AQLFDFTLSLSIPEGET  152 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~Dfg~a~~~~~~~~  152 (284)
                                    ....+..++.||+.||.|||   +.+|+||||||+|||++.++.     +||+|||++........
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  166 (298)
T 1csn_A           90 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  166 (298)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence                          11567789999999999999   999999999999999987776     99999999987754432


Q ss_pred             cc----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          153 HI----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       153 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ..    .......||+.|+|||++.+..++.++|||||||++|||++|..||....  ..........+...........
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~  244 (298)
T 1csn_A          167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK--AATNKQKYERIGEKKQSTPLRE  244 (298)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC--SCCHHHHHHHHHHHHHHSCHHH
T ss_pred             cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh--ccccHHHHHHHHhhccCccHHH
Confidence            11    11233679999999999999999999999999999999999999997543  1111111111111111111111


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .               ....+..+.+++.+||+.||++|||+.+|++.|+++.++
T Consensus       245 ~---------------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          245 L---------------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             H---------------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             H---------------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            1               011234588999999999999999999999999998864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.5e-40  Score=280.59  Aligned_cols=202  Identities=23%  Similarity=0.265  Sum_probs=149.1

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC-------------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ..++|...+.||+|+||+||+|.++|..||||++...                                           
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE  114 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence            4467888889999999999999999999999998654                                           


Q ss_pred             CCC------------------chhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 FPF------------------SVSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ~~~------------------~~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                      +|.                  ...++.++.|++.||.|||   +.+  |+||||||+|||++.++.+||+|||+++....
T Consensus       115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            111                  1456779999999999999   888  99999999999999999999999999976543


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....   .....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ................ 
T Consensus       192 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~--------~~~~~~~~~~~~~~~~-  259 (309)
T 3p86_A          192 TFLS---SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN--------PAQVVAAVGFKCKRLE-  259 (309)
T ss_dssp             -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC--------HHHHHHHHHHSCCCCC-
T ss_pred             cccc---cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhcCCCCC-
Confidence            3211   122578999999999999999999999999999999999999986432        1111111111111000 


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                    .+...+..+.+|+.+||+.||++|||+.++++.|+.+.++
T Consensus       260 --------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          260 --------------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             --------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             --------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                          0112233478999999999999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-39  Score=279.44  Aligned_cols=222  Identities=20%  Similarity=0.274  Sum_probs=160.2

Q ss_pred             HHHHHHHhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC-------------------------------------
Q 039895           47 ADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        47 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------   89 (284)
                      ...-....++|...+.||+|+||.||+|.+.++.||||++...                                     
T Consensus        29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             HHHHTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             cccccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            3333445578999999999999999999999999999998543                                     


Q ss_pred             -------CCCc--------------hhHHHHHHHHHHHHHHhccCCCC--------CeeecccccCcEEEecCCcceeec
Q 039895           90 -------FPFS--------------VSKLKIAIEIASAVAYLHVGFSR--------PVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        90 -------~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~--------~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                             +|..              ...+.++.|++.||.|||   +.        +|+||||||+|||++.++.+||+|
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D  185 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD  185 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred             ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence                   1111              456789999999999999   77        999999999999999999999999


Q ss_pred             cccccccCCCCcccc-CCCCcccCccccccccccCCCCCcc------hhHHHHHHHHHHHHhC----------CCCCCCC
Q 039895          141 FTLSLSIPEGETHIN-DSNRVIGTFGFMAPEYRTTGDFSEK------SDVYSFGALLLELLTG----------KKISYSS  203 (284)
Q Consensus       141 fg~a~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwS~G~il~elltg----------~~p~~~~  203 (284)
                      ||++........... ......||+.|+|||++.+...+..      +|||||||++|||++|          ..||...
T Consensus       186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~  265 (337)
T 3mdy_A          186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL  265 (337)
T ss_dssp             CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence            999977654332211 1123579999999999987766654      9999999999999999          4444332


Q ss_pred             CCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..   ........ ................         .....++..+.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       266 ~~---~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          266 VP---SDPSYEDM-REIVCIKKLRPSFPNR---------WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             SC---SSCCHHHH-HHHHTTSCCCCCCCGG---------GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cC---CCCchhhh-HHHHhhhccCcccccc---------chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            21   11111111 1111111111110000         11236677799999999999999999999999999999876


Q ss_pred             C
Q 039895          284 N  284 (284)
Q Consensus       284 ~  284 (284)
                      .
T Consensus       333 ~  333 (337)
T 3mdy_A          333 Q  333 (337)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.7e-39  Score=274.84  Aligned_cols=210  Identities=16%  Similarity=0.221  Sum_probs=160.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~   91 (284)
                      .++|...+.||+|+||.||+|..  +|+.||||++...                                        +|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            46788889999999999999997  8999999987644                                        11


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE---ecCCcceeeccccccccCCCCcc
Q 039895           92 ---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                     ....+..++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||++.........
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence                           11556789999999999999   9999999999999999   48899999999999877554321


Q ss_pred             c----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          154 I----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       154 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .    .......||+.|+|||++.+..++.++|||||||++|+|++|..||.....  .........+............
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA--ATKRQKYERISEKKMSTPIEVL  242 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--SSSSSHHHHHHHHHHHSCHHHH
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc--hhhhhhhhhhcccccCCchHHH
Confidence            1    112236799999999999999999999999999999999999999975431  2222222222111111110000


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                     ....+..+.+++.+||+.||++|||+.+|++.|+++.+.
T Consensus       243 ---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          243 ---------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             ---------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---------------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence                           011223488999999999999999999999999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.9e-40  Score=283.15  Aligned_cols=187  Identities=18%  Similarity=0.172  Sum_probs=144.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...++||+|+||+||+|.+  +|+.||||++...                                           
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            5677788999999999999999  7899999998543                                           


Q ss_pred             -CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|               ....+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........
T Consensus       137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~  213 (311)
T 3p1a_A          137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG  213 (311)
T ss_dssp             ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred             eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence             11               11467789999999999999   899999999999999999999999999998776543322


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....||+.|+|||++.+ .++.++|||||||++|||++|..|+....          . .. .........     
T Consensus       214 ----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~-~~-~~~~~~~~~-----  271 (311)
T 3p1a_A          214 ----EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------G-WQ-QLRQGYLPP-----  271 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------H-HH-HHTTTCCCH-----
T ss_pred             ----cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------H-HH-HHhccCCCc-----
Confidence                12568999999998875 78999999999999999999987764311          0 01 111111110     


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               .........+.+++.+||+.||++|||+.|+++
T Consensus       272 ---------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          272 ---------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ---------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                     011122345889999999999999999999986

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=4.7e-39  Score=275.73  Aligned_cols=205  Identities=19%  Similarity=0.277  Sum_probs=158.5

Q ss_pred             ceecHHHHHHHhcC----------CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------
Q 039895           43 RSFSADELKTATDD----------FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------   89 (284)
Q Consensus        43 ~~~~~~~l~~~~~~----------f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------   89 (284)
                      ..++++++.++++.          |+..+.||+|+||.||+|..  +|+.||||++...                     
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            46889999998875          55566899999999999998  7999999998643                     


Q ss_pred             --------------------CCC--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc
Q 039895           90 --------------------FPF--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV  135 (284)
Q Consensus        90 --------------------~~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~  135 (284)
                                          +|.              ...+..++.|++.||.|||   +.+|+||||||+|||++.++.
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~  179 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGR  179 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCC
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCc
Confidence                                111              1567789999999999999   899999999999999999999


Q ss_pred             ceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHH
Q 039895          136 AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       136 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~  215 (284)
                      +||+|||++.........   .....||+.|+|||++.+..++.++|||||||++|||++|..||....        ...
T Consensus       180 ~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~--------~~~  248 (321)
T 2c30_A          180 VKLSDFGFCAQISKDVPK---RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS--------PVQ  248 (321)
T ss_dssp             EEECCCTTCEECCSSSCC---BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHH
T ss_pred             EEEeeeeeeeecccCccc---cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHH
Confidence            999999998876543221   122579999999999999999999999999999999999999986432        111


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....... ......             ......+..+.+++.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~-~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          249 AMKRLRD-SPPPKL-------------KNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHH-SSCCCC-------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHhc-CCCCCc-------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1111111 111110             001122334789999999999999999999986

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4e-39  Score=273.24  Aligned_cols=194  Identities=20%  Similarity=0.300  Sum_probs=151.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .+.|...+.||+|+||+||+|..  +|+.||||++...                                         +
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            35788899999999999999987  8899999998543                                         2


Q ss_pred             CC--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           91 PF--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        91 ~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      |.              ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..........  
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--  173 (297)
T 3fxz_A           99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--  173 (297)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB--
T ss_pred             CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc--
Confidence            21              1456789999999999999   8999999999999999999999999999988765433221  


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                       ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ............. ....      
T Consensus       174 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~~~~~~~-~~~~------  237 (297)
T 3fxz_A          174 -STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--------PLRALYLIATNGT-PELQ------  237 (297)
T ss_dssp             -CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHHCS-CCCS------
T ss_pred             -CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCC-CCCC------
Confidence             22579999999999999999999999999999999999999986432        1111111111111 0100      


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                             .+...+..+.+++.+||+.||++|||+.|+++
T Consensus       238 -------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          238 -------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             -------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -------CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                   11223344789999999999999999999975

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.4e-39  Score=275.10  Aligned_cols=202  Identities=22%  Similarity=0.333  Sum_probs=153.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ++|...+.||+|+||+||+|.+  ++..||+|++...                                         +|
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            5677788999999999999998  6899999987543                                         11


Q ss_pred             Cc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 FS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      ..                ..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...........
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE  166 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence            11                566789999999999999   99999999999999999999999999999987654332211


Q ss_pred             -----------CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccHHHHHHHHhhc
Q 039895          156 -----------DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE-DYRLQDLVKKYIEN  223 (284)
Q Consensus       156 -----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~  223 (284)
                                 ......||+.|+|||++.+..++.++|||||||++|||++|..|+......... ...........   
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---  243 (310)
T 3s95_A          167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY---  243 (310)
T ss_dssp             -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT---
T ss_pred             ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc---
Confidence                       111357999999999999999999999999999999999999988653311111 11111111110   


Q ss_pred             CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          224 ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                            ..+              .++..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       244 ------~~~--------------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          244 ------CPP--------------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             ------CCT--------------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------CCC--------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                  001              111237899999999999999999999999999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=9e-40  Score=284.84  Aligned_cols=213  Identities=17%  Similarity=0.153  Sum_probs=158.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-C------CcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-Q------DRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~------~~~vavK~~~~~-------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+ .      ++.||||++...                                     
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            45788889999999999999988 2      478999996532                                     


Q ss_pred             -------------------CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe--cC
Q 039895           90 -------------------FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ--EE  133 (284)
Q Consensus        90 -------------------~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~--~~  133 (284)
                                         +|               ....++.++.||+.||.|||   +.+|+||||||+|||++  .+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~~  190 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNP  190 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSCT
T ss_pred             EeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCCC
Confidence                               11               11567789999999999999   89999999999999999  88


Q ss_pred             CcceeeccccccccCCCCccc----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 039895          134 NVAQLFDFTLSLSIPEGETHI----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE  209 (284)
Q Consensus       134 ~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~  209 (284)
                      +.+||+|||+++.+.......    .......||+.|+|||++.+..++.++|||||||++|||++|..||....    .
T Consensus       191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~----~  266 (364)
T 3op5_A          191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL----K  266 (364)
T ss_dssp             TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT----T
T ss_pred             CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc----c
Confidence            999999999998765432211    11123569999999999999999999999999999999999999997432    1


Q ss_pred             cccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          210 DYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ........... ....+..++++.+..         ...+..+.+++..||+.+|++||++.+|++.|+++++.
T Consensus       267 ~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          267 DPKYVRDSKIR-YRENIASLMDKCFPA---------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             CHHHHHHHHHH-HHHCHHHHHHHHSCT---------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHH-hhhhHHHHHHHhccc---------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            11111111111 111222222222110         11234588999999999999999999999999998763

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.5e-39  Score=277.85  Aligned_cols=201  Identities=19%  Similarity=0.289  Sum_probs=152.0

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CC---cceEEEeecCC-----------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QD---RPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~-----------------------------------------   89 (284)
                      .|...+.||+|+||.||+|.+  ++   ..||||++...                                         
T Consensus        50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  129 (325)
T 3kul_A           50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT  129 (325)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEE
T ss_pred             HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEe
Confidence            455568899999999999998  33   35999998754                                         


Q ss_pred             -CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|.                ...++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus       130 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  206 (325)
T 3kul_A          130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD  206 (325)
T ss_dssp             ECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred             eCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence             111                1467789999999999999   99999999999999999999999999999987755433


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      .........+|+.|+|||++.+..++.++|||||||++|||++ |..||....        ..............     
T Consensus       207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--------~~~~~~~~~~~~~~-----  273 (325)
T 3kul_A          207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--------NRDVISSVEEGYRL-----  273 (325)
T ss_dssp             CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--------HHHHHHHHHTTCCC-----
T ss_pred             ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHcCCCC-----
Confidence            2222222456788999999998899999999999999999999 999986432        11122111111100     


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                 +.+..++..+.+|+..||+.||++|||+.+|++.|+.+.++
T Consensus       274 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          274 -----------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             -----------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence                       01112334588999999999999999999999999999865

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=5.9e-39  Score=276.05  Aligned_cols=208  Identities=17%  Similarity=0.194  Sum_probs=157.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CCC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FPF   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~~   92 (284)
                      ++|...+.||+|+||.||+|..  +|+.||||++...                                        +|.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLG   88 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCC
Confidence            5688889999999999999997  8899999998643                                        111


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc-----ceeeccccccccCCCCc
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV-----AQLFDFTLSLSIPEGET  152 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~Dfg~a~~~~~~~~  152 (284)
                                     ...++.++.|++.||.|||   +.+|+||||||+|||++.++.     +||+|||+++.+.....
T Consensus        89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~  165 (330)
T 2izr_A           89 PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET  165 (330)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence                           1566789999999999999   899999999999999998887     99999999987654332


Q ss_pred             ccc----CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          153 HIN----DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       153 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ...    ......||+.|+|||++.+..++.++|||||||++|||++|..||....  ..........+......... +
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~~~~-~  242 (330)
T 2izr_A          166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK--ADTLKERYQKIGDTKRATPI-E  242 (330)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--CSSHHHHHHHHHHHHHHSCH-H
T ss_pred             CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc--cccHHHHHHHHHhhhccCCH-H
Confidence            111    1123679999999999999999999999999999999999999997543  11111111111111110000 0


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ...              ...+ .+.+++..||+.||.+||++.+|++.|+++.+.
T Consensus       243 ~~~--------------~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          243 VLC--------------ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             HHT--------------TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHh--------------ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            000              0012 588999999999999999999999999988753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.1e-38  Score=286.76  Aligned_cols=209  Identities=18%  Similarity=0.260  Sum_probs=160.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~   91 (284)
                      .+.|...+.||+|+||.||+|.+  ++..||||++...                                        +|
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            36789999999999999999998  7899999987643                                        11


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE---ecCCcceeeccccccccCCCCcc
Q 039895           92 ---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                     ....++.++.||+.||.|||   +.+|+||||||+|||+   +.++.+||+|||+++.+......
T Consensus        86 g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~  162 (483)
T 3sv0_A           86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH  162 (483)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence                           11567789999999999999   8999999999999999   68899999999999877654322


Q ss_pred             c----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          154 I----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       154 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .    .......||+.|+|||++.+..++.++|||||||++|||++|..||....  ..........+...........+
T Consensus       163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~--~~~~~~~~~~i~~~~~~~~~~~l  240 (483)
T 3sv0_A          163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK--AGTKKQKYEKISEKKVATSIEAL  240 (483)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC--CSSHHHHHHHHHHHHHHSCHHHH
T ss_pred             cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc--chhHHHHHHHHhhccccccHHHH
Confidence            1    11123679999999999999999999999999999999999999997543  11111111111111111111110


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                     ...++..+.+|+..||+.+|++||++.+|++.|++++.
T Consensus       241 ---------------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          241 ---------------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             ---------------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ---------------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence                           01123458899999999999999999999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.7e-39  Score=283.14  Aligned_cols=202  Identities=24%  Similarity=0.347  Sum_probs=155.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+  ++..||||++...                                          
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            45677778999999999999999  6899999998643                                          


Q ss_pred             CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +|..                ...+.++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++........
T Consensus       193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence            1110                456789999999999999   999999999999999999999999999999875443222


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      . ......+++.|+|||++....++.++|||||||++|||++ |..||....        ... +......+...     
T Consensus       270 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--------~~~-~~~~~~~~~~~-----  334 (377)
T 3cbl_A          270 A-SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--------NQQ-TREFVEKGGRL-----  334 (377)
T ss_dssp             C-CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--------HHH-HHHHHHTTCCC-----
T ss_pred             e-cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHH-HHHHHHcCCCC-----
Confidence            1 1111346778999999988889999999999999999998 888876432        111 11111111100     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                +.+..++..+.+|+.+||+.||++|||+.+|++.|+++.+.
T Consensus       335 ----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          335 ----------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence                      11112334588999999999999999999999999998753

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.9e-39  Score=273.55  Aligned_cols=211  Identities=21%  Similarity=0.274  Sum_probs=151.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe------CCcceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~---------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|.+      +++.||||++...                                       
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5677788999999999999984      6789999998654                                       


Q ss_pred             ----CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ----FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ----~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                          +|.                ....+.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  166 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred             EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence                111                1456789999999999999   99999999999999999999999999999987755


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC-------CCccccHHHHHHHHhh
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD-------DGEDYRLQDLVKKYIE  222 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~~  222 (284)
                      ............+|+.|+|||++.+..++.++||||||+++|||++|..|+......       ................
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (295)
T 3ugc_A          167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK  246 (295)
T ss_dssp             ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred             CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence            433222222345788899999999889999999999999999999999887532100       0000000000001110


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ...               ..+.+..++..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus       247 ~~~---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          247 NNG---------------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             TTC---------------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccC---------------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            000               0111223345588999999999999999999999999999764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.7e-39  Score=280.99  Aligned_cols=163  Identities=23%  Similarity=0.367  Sum_probs=124.7

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                      ..+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........... .....||+.|+|||++.+
T Consensus       194 ~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~  269 (359)
T 3vhe_A          194 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPETIFD  269 (359)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEE-C--CEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchh-ccccCCCceeEChhhhcC
Confidence            35668999999999999   89999999999999999999999999999987644332211 122568999999999998


Q ss_pred             CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHH
Q 039895          175 GDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT  253 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (284)
                      ..++.++|||||||++|||++ |..||.....    ......    ..........               +......+.
T Consensus       270 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~----~~~~~~~~~~---------------~~~~~~~l~  326 (359)
T 3vhe_A          270 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEFCR----RLKEGTRMRA---------------PDYTTPEMY  326 (359)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHHH----HHHHTCCCCC---------------CTTCCHHHH
T ss_pred             CCCCchhhhhhHHHHHHHHHhcCCCCCCccch----hHHHHH----HHHcCCCCCC---------------CCCCCHHHH
Confidence            899999999999999999998 9999865331    111111    1111110000               111223478


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          254 ELAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       254 ~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                      +++.+||+.||++|||+.||++.|+++.++|
T Consensus       327 ~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          327 QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=3.6e-39  Score=277.08  Aligned_cols=200  Identities=20%  Similarity=0.313  Sum_probs=148.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcc----eEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRP----ISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~----vavK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  ++..    ||+|.+...                                       
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v   94 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            5678888999999999999998  5554    588876432                                       


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence              00                11456789999999999999   8999999999999999999999999999998775443


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||....     ...+...+.    .....   
T Consensus       172 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~----~~~~~---  238 (327)
T 3poz_A          172 KEYH-AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILE----KGERL---  238 (327)
T ss_dssp             C--------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHH----TTCCC---
T ss_pred             cccc-ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-----HHHHHHHHH----cCCCC---
Confidence            2221 112456889999999999999999999999999999999 999986432     112222111    11000   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                  +.+..+...+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       239 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          239 ------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             ------------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             ------------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                        0011223347899999999999999999999999998864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6.5e-39  Score=267.89  Aligned_cols=200  Identities=20%  Similarity=0.307  Sum_probs=156.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FP--   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~--   91 (284)
                      ++|...+.||+|+||+||+|.+ ++..||+|++...                                        +|  
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   89 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence            4677778999999999999999 8889999998754                                        11  


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++...........  
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--  164 (269)
T 4hcu_A           90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS--  164 (269)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST--
T ss_pred             CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccccc--
Confidence                          11456789999999999999   99999999999999999999999999999987654322211  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....+|+.|+|||++.+..++.++||||+|+++|+|++ |..||....        .............   ...     
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--------~~~~~~~~~~~~~---~~~-----  228 (269)
T 4hcu_A          165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDISTGFR---LYK-----  228 (269)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTCC---CCC-----
T ss_pred             cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHHhcCcc---CCC-----
Confidence            22557888999999998899999999999999999999 888886432        1122222111100   000     


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                              +...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       229 --------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          229 --------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             --------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             --------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence                    011123478999999999999999999999999999876

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=6.9e-39  Score=275.36  Aligned_cols=190  Identities=22%  Similarity=0.299  Sum_probs=149.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+  +|+.||||++...                                          
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46788889999999999999998  8999999998643                                          


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........
T Consensus        94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  170 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL  170 (328)
T ss_dssp             CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred             ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence             1211               456789999999999999   999999999999999999999999999999876544322


Q ss_pred             ccCCCCcccCccccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                          ....||+.|+|||++.+..++ .++||||+||++|+|++|..||....        ......... .+...     
T Consensus       171 ----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~-~~~~~-----  232 (328)
T 3fe3_A          171 ----DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERVL-RGKYR-----  232 (328)
T ss_dssp             ----GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCCC-----
T ss_pred             ----ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hCCCC-----
Confidence                226799999999999888765 79999999999999999999996532        122222211 11110     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 .+...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       233 -----------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          233 -----------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             -----------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             -----------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                       00112234789999999999999999999975

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.5e-38  Score=271.64  Aligned_cols=200  Identities=21%  Similarity=0.329  Sum_probs=150.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcc----eEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRP----ISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~----vavK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  ++..    ||+|.+...                                       
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v   92 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV   92 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence            4577778999999999999998  5555    777776432                                       


Q ss_pred             --CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|.                ....+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence              111                0457789999999999999   8999999999999999999999999999998875443


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .... .....||+.|+|||++.+..++.++|||||||++|+|++ |..||....     .......+.    ......  
T Consensus       170 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~----~~~~~~--  237 (325)
T 3kex_A          170 KQLL-YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-----LAEVPDLLE----KGERLA--  237 (325)
T ss_dssp             TCCC------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----TTHHHHHHH----TTCBCC--
T ss_pred             cccc-ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-----HHHHHHHHH----cCCCCC--
Confidence            2211 122567889999999998899999999999999999999 999986532     111222111    111000  


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .+.             .++..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       238 ~~~-------------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          238 QPQ-------------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             CCT-------------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             CCC-------------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            000             011126789999999999999999999999998864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.2e-38  Score=279.95  Aligned_cols=195  Identities=21%  Similarity=0.269  Sum_probs=145.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +++.||+|++...                                          
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            36788889999999999999998  7889999998643                                          


Q ss_pred             ---CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~  207 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  207 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence               1111               456679999999999999   9999999999999999999999999999997643222


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..   .....||+.|+|||++.+..++.++|||||||++|||++|..||...........................    
T Consensus       208 ~~---~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----  280 (396)
T 4dc2_A          208 DT---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----  280 (396)
T ss_dssp             CC---BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC----
T ss_pred             Cc---cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC----
Confidence            11   22368999999999999999999999999999999999999999654321211111111111111111110    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                                +  +......+.+|+.+||+.||++||++
T Consensus       281 ----------~--p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          281 ----------I--PRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             ----------C--CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ----------C--CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence                      0  01122347899999999999999996

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=7.5e-39  Score=279.84  Aligned_cols=202  Identities=19%  Similarity=0.299  Sum_probs=142.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+     .+..||||++...                                        
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            4688899999999999999987     3667999998643                                        


Q ss_pred             --CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|.                ...++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence              111                1457789999999999999   8999999999999999999999999999998775443


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ..........+|+.|+|||++.+..++.++|||||||++||+++ |..||....        ......... .+...   
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--------~~~~~~~i~-~~~~~---  269 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--------NQDVIKAVD-EGYRL---  269 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--------HHHHHHHHH-TTEEC---
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHH-cCCCC---
Confidence            22222222345788999999998899999999999999999998 999986432        111111111 11000   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                  +.+..++..+.+++.+||+.||++|||+.+|++.|+++.+.
T Consensus       270 ------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          270 ------------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             ------------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ------------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence                        00112334588999999999999999999999999998753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.1e-38  Score=266.31  Aligned_cols=200  Identities=18%  Similarity=0.250  Sum_probs=155.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FP--   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~--   91 (284)
                      ++|...+.||+|+||.||+|.+ ++..||+|++...                                        +|  
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN   87 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence            5677788999999999999998 6668999998754                                        11  


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    ....+..++.|++.||.|||   +.+|+||||||+|||++.++.++|+|||++............ 
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~-  163 (268)
T 3sxs_A           88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV-  163 (268)
T ss_dssp             CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC-
T ss_pred             CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc-
Confidence                          11566789999999999999   899999999999999999999999999999877554433222 


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                       ...+|+.|+|||++.+..++.++||||||+++|+|++ |..||....        .......... ..  ....+    
T Consensus       164 -~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~-~~--~~~~~----  227 (268)
T 3sxs_A          164 -GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT--------NSEVVLKVSQ-GH--RLYRP----  227 (268)
T ss_dssp             -SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHHHHHT-TC--CCCCC----
T ss_pred             -CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC--------hHHHHHHHHc-CC--CCCCC----
Confidence             2456788999999988889999999999999999999 888886432        1111111111 11  00000    


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                               ...+..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus       228 ---------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          228 ---------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             ---------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             ---------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence                     11123478999999999999999999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=5.1e-39  Score=287.88  Aligned_cols=204  Identities=21%  Similarity=0.339  Sum_probs=157.6

Q ss_pred             HHHHhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------
Q 039895           50 LKTATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        50 l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------   89 (284)
                      +....++|...+.||+|+||.||+|.+ ++..||||++...                                       
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e  262 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITE  262 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEC
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEe
Confidence            344456677788999999999999999 6788999998754                                       


Q ss_pred             CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      +|..                 ...+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus       263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~  339 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  339 (454)
T ss_dssp             CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence            1111                 356679999999999999   89999999999999999999999999999987654322


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..  .....+|+.|+|||++....++.++|||||||++|||++ |..||....        ..............     
T Consensus       340 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i~~~~~~-----  404 (454)
T 1qcf_A          340 TA--REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--------NPEVIRALERGYRM-----  404 (454)
T ss_dssp             HT--TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHHHHHTCCC-----
T ss_pred             ec--cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCC-----
Confidence            11  112456789999999998899999999999999999999 998886432        11111111111000     


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                 +.+..++..+.+|+.+||+.||++|||+.+|++.|+++..
T Consensus       405 -----------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          405 -----------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             -----------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence                       1112234458899999999999999999999999998864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1e-38  Score=270.37  Aligned_cols=204  Identities=18%  Similarity=0.293  Sum_probs=151.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|..  ++..||+|++...                                           
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            4677788999999999999998  7899999987432                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........
T Consensus        91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  167 (294)
T 4eqm_A           91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT  167 (294)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence             111               1567789999999999999   999999999999999999999999999999876543322


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      ..  ....||+.|+|||++.+..++.++||||||+++|+|++|..||....        .......... ....... ..
T Consensus       168 ~~--~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~-~~~~~~~-~~  235 (294)
T 4eqm_A          168 QT--NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--------AVSIAIKHIQ-DSVPNVT-TD  235 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--------HHHHHHHHHS-SCCCCHH-HH
T ss_pred             cc--CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhh-ccCCCcc-hh
Confidence            21  22579999999999999999999999999999999999999996532        1111111111 1111100 00


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHHHHhc
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-TIVQVAKQLRQIYQS  283 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~ev~~~L~~l~~~  283 (284)
                                .....+..+.+++.+||+.||++|| ++.++.+.|+.+..+
T Consensus       236 ----------~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          236 ----------VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             ----------SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             ----------cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence                      0112234588999999999999999 999999999987654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.7e-38  Score=277.32  Aligned_cols=200  Identities=21%  Similarity=0.279  Sum_probs=152.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe---------CCcceEEEeecCC------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL---------QDRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+         ++..||||++...                                    
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            4667778899999999999986         2346999998653                                    


Q ss_pred             -------CCC-------------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -------FPF-------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -------~~~-------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                             +|.                               ....+.++.||+.||.|||   +.+|+||||||+|||++
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  237 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVT  237 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEEC
Confidence                   111                               1234678999999999999   99999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~  210 (284)
                      .++.+||+|||+++.......... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||....     .
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~-----~  311 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKK-TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V  311 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCT-TTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----G
T ss_pred             CCCCEEEccccCCcccCcccceec-ccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-----H
Confidence            999999999999987654332211 122457889999999999999999999999999999999 888886432     1


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      ..+...+    ..+....               .+..++..+.+++.+||+.||++|||+.|+++.|++++.
T Consensus       312 ~~~~~~~----~~~~~~~---------------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          312 EELFKLL----KEGHRMD---------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             GGHHHHH----HTTCCCC---------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHH----hcCCCCC---------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1122111    1111000               011233458899999999999999999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.8e-38  Score=284.08  Aligned_cols=197  Identities=23%  Similarity=0.292  Sum_probs=154.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------------CC--
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------------FP--   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------------~~--   91 (284)
                      .++|...+.||+|+||.||+|.+.|+.||||++...                                        +|  
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~  271 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK  271 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred             hHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence            356777889999999999999999999999999764                                        11  


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           92 ---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        92 ---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                     ....++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......    
T Consensus       272 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----  344 (450)
T 1k9a_A          272 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----  344 (450)
T ss_dssp             CBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccccc----
Confidence                           11456789999999999999   99999999999999999999999999999976533221    


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                        ...+++.|+|||++.+..++.++|||||||++|||++ |..||....     .......+    ..+..         
T Consensus       345 --~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i----~~~~~---------  404 (450)
T 1k9a_A          345 --TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRV----EKGYK---------  404 (450)
T ss_dssp             ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-----TTTHHHHH----HTTCC---------
T ss_pred             --CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH----HcCCC---------
Confidence              1356889999999999999999999999999999998 998886433     11121111    11100         


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                            .+.+..++..+.+|+.+||+.||++|||+.++++.|+++...
T Consensus       405 ------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          405 ------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence                  011122344588999999999999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.1e-38  Score=269.27  Aligned_cols=204  Identities=23%  Similarity=0.373  Sum_probs=145.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC------------------------------------------CCC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------------------------FPF   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------------------------~~~   92 (284)
                      +.|...+.||+|+||+||+|.+.+ .||+|++...                                          +|.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~  102 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCE  102 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCC
T ss_pred             cceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecC
Confidence            568888899999999999999855 4999998643                                          111


Q ss_pred             c----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           93 S----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        93 ~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      .                ...+.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.......... .
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~  178 (289)
T 3og7_A          103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH-Q  178 (289)
T ss_dssp             EEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred             CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccccc-c
Confidence            0                456789999999999999   8999999999999999999999999999997654322111 1


Q ss_pred             CCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .....||+.|+|||++.   ...++.++||||||+++|+|++|..||....    .......    ............. 
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~----~~~~~~~~~~~~~-  249 (289)
T 3og7_A          179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN----NRDQIIE----MVGRGSLSPDLSK-  249 (289)
T ss_dssp             -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC----CHHHHHH----HHHHTSCCCCTTS-
T ss_pred             ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc----hHHHHHH----HhcccccCcchhh-
Confidence            12256899999999986   5678899999999999999999999986432    1111111    1111111111000 


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                ....++..+.+|+.+||+.+|++|||+.++++.|+++.+
T Consensus       250 ----------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          250 ----------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             ----------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ----------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence                      011223458899999999999999999999999999865

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.1e-38  Score=268.23  Aligned_cols=200  Identities=21%  Similarity=0.339  Sum_probs=148.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC-------------------------------------CCC-----
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT-------------------------------------FPF-----   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------------------------------------~~~-----   92 (284)
                      ++|...+.||+|+||.||+|.+.++.||+|++...                                     +|.     
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L~   87 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLY   87 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCBHH
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCHH
Confidence            46777889999999999999999999999998654                                     111     


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc-ceeeccccccccCCCCccccCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV-AQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~-~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                   ....+.++.|++.||.|||+.+..+|+||||||+|||++.++. +||+|||++........      
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~------  161 (307)
T 2eva_A           88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT------  161 (307)
T ss_dssp             HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------------
T ss_pred             HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc------
Confidence                         1456788999999999999322289999999999999998886 79999999976543221      


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....      ........... .......         
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~-~~~~~~~---------  225 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG------GPAFRIMWAVH-NGTRPPL---------  225 (307)
T ss_dssp             ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC------SSHHHHHHHHH-TTCCCCC---------
T ss_pred             cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC------ccHHHHHHHHh-cCCCCCc---------
Confidence            1468999999999999899999999999999999999999986432      11111111111 1111110         


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                            ....+..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       226 ------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          226 ------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             ------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             ------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence                  11122347899999999999999999999999998864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.7e-38  Score=266.46  Aligned_cols=196  Identities=25%  Similarity=0.365  Sum_probs=150.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  +++.||+|++...                                           
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l   98 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM   98 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence            6788888999999999999999  7899999998432                                           


Q ss_pred             ---CCC----------------chhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEecCCc-----ceeecccc
Q 039895           90 ---FPF----------------SVSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQEENV-----AQLFDFTL  143 (284)
Q Consensus        90 ---~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~-----~kl~Dfg~  143 (284)
                         +|.                ...++.++.|++.||.|||   +.+  |+||||||+|||++.++.     +||+|||+
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~  175 (287)
T 4f0f_A           99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL  175 (287)
T ss_dssp             EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred             EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence               111                1556789999999999999   888  999999999999988776     99999999


Q ss_pred             ccccCCCCccccCCCCcccCcccccccccc--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRT--TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI  221 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  221 (284)
                      ++.......      ...||+.|+|||++.  ...++.++|||||||++|+|++|..||....      ...........
T Consensus       176 ~~~~~~~~~------~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~  243 (287)
T 4f0f_A          176 SQQSVHSVS------GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS------YGKIKFINMIR  243 (287)
T ss_dssp             CBCCSSCEE------CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC------CCHHHHHHHHH
T ss_pred             ccccccccc------ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc------ccHHHHHHHHh
Confidence            975543221      257899999999983  4567899999999999999999999996433      11111111111


Q ss_pred             hcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          222 ENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      .... ....              +...+..+.+++.+||+.||++|||+.|+++.|++|
T Consensus       244 ~~~~-~~~~--------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          244 EEGL-RPTI--------------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HSCC-CCCC--------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ccCC-CCCC--------------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            1111 1111              112234488999999999999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=8.3e-39  Score=278.18  Aligned_cols=155  Identities=23%  Similarity=0.245  Sum_probs=131.6

Q ss_pred             CCCcceecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------
Q 039895           39 HNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------   89 (284)
Q Consensus        39 ~~~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------   89 (284)
                      ......+++.+.....++|...+.||+|+||+||+|..  +++.||||++...                           
T Consensus        19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~i   98 (360)
T 3llt_A           19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNI   98 (360)
T ss_dssp             -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred             CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence            34555667777777778999999999999999999999  8899999998643                           


Q ss_pred             ------------------CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---
Q 039895           90 ------------------FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---  132 (284)
Q Consensus        90 ------------------~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---  132 (284)
                                        +|                .......++.||+.||.|||   +.+|+||||||+|||++.   
T Consensus        99 v~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTC
T ss_pred             ecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccc
Confidence                              11                11456789999999999999   999999999999999975   


Q ss_pred             ----------------------CCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHH
Q 039895          133 ----------------------ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALL  190 (284)
Q Consensus       133 ----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il  190 (284)
                                            ++.+||+|||++........      ...||+.|+|||++.+..++.++|||||||++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  249 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG------SIINTRQYRAPEVILNLGWDVSSDMWSFGCVL  249 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC------SCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCceecCCCCc------CccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence                                  78899999999976543222      25789999999999999999999999999999


Q ss_pred             HHHHhCCCCCCC
Q 039895          191 LELLTGKKISYS  202 (284)
Q Consensus       191 ~elltg~~p~~~  202 (284)
                      |+|++|..||..
T Consensus       250 ~ell~g~~pf~~  261 (360)
T 3llt_A          250 AELYTGSLLFRT  261 (360)
T ss_dssp             HHHHHSSCSCCC
T ss_pred             HHHHHCCCCCCC
Confidence            999999999965

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=5.6e-38  Score=270.52  Aligned_cols=191  Identities=23%  Similarity=0.291  Sum_probs=149.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|+.||+|++...                                           
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            6788889999999999999998  7899999998542                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++........
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence             111               1456678999999999999   899999999999999999999999999999764332211


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .....||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ....      
T Consensus       162 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~-~~~~------  223 (337)
T 1o6l_A          162 ---MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILM-EEIR------  223 (337)
T ss_dssp             ---BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-CCCC------
T ss_pred             ---ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHHc-CCCC------
Confidence               123679999999999999999999999999999999999999996432        1111211111 1100      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~~  276 (284)
                      +          +...+..+.+|+.+||+.||++||     ++.|+++.
T Consensus       224 ~----------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          224 F----------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             C----------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             C----------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            0          011223478999999999999999     89998753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8.4e-39  Score=275.51  Aligned_cols=189  Identities=17%  Similarity=0.220  Sum_probs=148.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|.+  +++.||+|++...                                           
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5788889999999999999998  8899999988532                                           


Q ss_pred             -CCC--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 -FPF--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 -~~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                       +|.              ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++......... 
T Consensus        89 E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~-  164 (336)
T 3h4j_B           89 EYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL-  164 (336)
T ss_dssp             CCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT-
T ss_pred             ECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc-
Confidence             111              1567789999999999999   899999999999999999999999999999876544322 


Q ss_pred             cCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.......                     +....
T Consensus       165 ---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---------------------~~~~i  220 (336)
T 3h4j_B          165 ---KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---------------------LFKKV  220 (336)
T ss_dssp             ---CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT---------------------CBCCC
T ss_pred             ---ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH---------------------HHHHH
Confidence               22579999999999988776 689999999999999999999997533110                     00000


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....    +..+...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       221 ~~~~----~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          221 NSCV----YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             CSSC----CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HcCC----CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            0000    0011122344789999999999999999999975

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.9e-38  Score=265.15  Aligned_cols=195  Identities=24%  Similarity=0.346  Sum_probs=143.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC---------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+.|..||||++...                                             
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            56777889999999999999999999999997543                                             


Q ss_pred             CCC--------------chhHHHHHHHHHHHHHHhccCCCCC---eeecccccCcEEEec--------CCcceeeccccc
Q 039895           90 FPF--------------SVSKLKIAIEIASAVAYLHVGFSRP---VVSRDIKPTTIVLQE--------ENVAQLFDFTLS  144 (284)
Q Consensus        90 ~~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~---ivHrDlkp~NILl~~--------~~~~kl~Dfg~a  144 (284)
                      +|.              ......++.|++.||.|||   +.+   |+||||||+|||++.        ++.+||+|||++
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~  163 (271)
T 3dtc_A           87 FARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA  163 (271)
T ss_dssp             CCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred             cCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence            111              1557789999999999999   777   999999999999986        678999999999


Q ss_pred             cccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE  224 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
                      .........     ...||+.|+|||++.+..++.++||||||+++|+|++|..||....        ........... 
T Consensus       164 ~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~-  229 (271)
T 3dtc_A          164 REWHRTTKM-----SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--------GLAVAYGVAMN-  229 (271)
T ss_dssp             -----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--------HHHHHHHHHTS-
T ss_pred             ccccccccc-----CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHhhhcC-
Confidence            766543221     2568999999999998889999999999999999999999986432        11111111111 


Q ss_pred             cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          225 SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      .....              .+...+..+.+++.+||+.||++|||+.|+++.|++|
T Consensus       230 ~~~~~--------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          230 KLALP--------------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CCCCC--------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCCC--------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            11000              0112234488999999999999999999999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=6e-38  Score=270.71  Aligned_cols=227  Identities=19%  Similarity=0.287  Sum_probs=164.5

Q ss_pred             eecHHHHHHHhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------
Q 039895           44 SFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------   89 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------   89 (284)
                      ..++.--....++|...+.||+|+||.||+|.++|+.||||++...                                  
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~  110 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNG  110 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence            3344444455678999999999999999999999999999998644                                  


Q ss_pred             ----------CCC--------------chhHHHHHHHHHHHHHHhccCC-----CCCeeecccccCcEEEecCCcceeec
Q 039895           90 ----------FPF--------------SVSKLKIAIEIASAVAYLHVGF-----SRPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        90 ----------~~~--------------~~~~~~i~~~i~~gL~~LH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                                +|.              ...++.++.|++.||.|||...     +.+|+||||||+|||++.++.+||+|
T Consensus       111 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~D  190 (342)
T 1b6c_B          111 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  190 (342)
T ss_dssp             SCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECC
T ss_pred             ccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEE
Confidence                      111              0456789999999999999321     47899999999999999999999999


Q ss_pred             cccccccCCCCccc-cCCCCcccCccccccccccCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCC
Q 039895          141 FTLSLSIPEGETHI-NDSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTG----------KKISYSS  203 (284)
Q Consensus       141 fg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~G~il~elltg----------~~p~~~~  203 (284)
                      ||++.......... .......||+.|+|||++.+.      .++.++|||||||++|||++|          ..||...
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence            99998765443221 112235799999999998765      234789999999999999999          5666543


Q ss_pred             CCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ...   ......+..... .......+...         .....+...+.+|+.+||+.||++|||+.+|++.|+++.++
T Consensus       271 ~~~---~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          271 VPS---DPSVEEMRKVVC-EQKLRPNIPNR---------WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             SCS---SCCHHHHHHHHT-TSCCCCCCCGG---------GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CcC---cccHHHHHHHHH-HHHhCCCCccc---------ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            211   111222222211 11111111000         01235666789999999999999999999999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.3e-38  Score=270.24  Aligned_cols=211  Identities=15%  Similarity=0.199  Sum_probs=150.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC-------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------------------------------------------   89 (284)
                      .+.|...+.||+|+||+||+|.+ +|+.||+|++...                                           
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            46788889999999999999999 8899999998643                                           


Q ss_pred             CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|               .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..........
T Consensus       100 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  176 (311)
T 3niz_A          100 FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY  176 (311)
T ss_dssp             CCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred             CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence            11               11456789999999999999   9999999999999999999999999999998765332221


Q ss_pred             cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc---ccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES---FKEIV  230 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  230 (284)
                         ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||....    . ......+........   +....
T Consensus       177 ---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~-~~~~~~i~~~~~~~~~~~~~~~~  248 (311)
T 3niz_A          177 ---THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT----D-DDQLPKIFSILGTPNPREWPQVQ  248 (311)
T ss_dssp             ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS----T-TTHHHHHHHHHCCCCTTTSGGGT
T ss_pred             ---cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC----h-HHHHHHHHHHHCCCChHHhhhhh
Confidence               12568999999999876 468999999999999999999999997533    1 112222222111111   11100


Q ss_pred             c------ccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 D------PAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~------~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +      ..........+ .........+.+|+.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            0      00000000000 001122345789999999999999999999986

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.6e-38  Score=276.28  Aligned_cols=194  Identities=22%  Similarity=0.289  Sum_probs=150.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|..  +|..||+|++...                                          
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            46788889999999999999999  7899999998643                                          


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC----cceeecccccc
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN----VAQLFDFTLSL  145 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~Dfg~a~  145 (284)
                           +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++    .+||+|||++.
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~  167 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence                 111               1567789999999999999   89999999999999998777    79999999998


Q ss_pred             ccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      ........    ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ......... ...
T Consensus       168 ~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--------~~~~~~~i~-~~~  234 (361)
T 2yab_A          168 EIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANIT-AVS  234 (361)
T ss_dssp             ECCTTCCC----CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHH-TTC
T ss_pred             EcCCCCcc----ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hcC
Confidence            77553321    22579999999999998899999999999999999999999996532        111111111 111


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..  +++          +.....+..+.+|+.+||..||++|||+.|+++
T Consensus       235 ~~--~~~----------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          235 YD--FDE----------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CC--CCH----------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CC--CCc----------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00  000          001122345789999999999999999999975

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.1e-38  Score=269.66  Aligned_cols=204  Identities=20%  Similarity=0.270  Sum_probs=154.1

Q ss_pred             HhcCCCCCC-eeeecCCceEEEEEe----CCcceEEEeecCC--------------------------------------
Q 039895           53 ATDDFDGGK-VIMKCLFYKLYKGFL----QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~-~lg~G~~g~Vy~~~~----~~~~vavK~~~~~--------------------------------------   89 (284)
                      ..+.|.... .||+|+||+||+|.+    .+..||||++...                                      
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   93 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM   93 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcE
Confidence            345566666 899999999999965    4678999998653                                      


Q ss_pred             ----CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ----FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ----~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                          +|               .....+.++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++......
T Consensus        94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD  170 (291)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence                11               11457789999999999999   899999999999999999999999999999877554


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ...........+|+.|+|||++.+..++.++||||||+++|+|++ |..||....        ..... ...........
T Consensus       171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~-~~~~~~~~~~~  241 (291)
T 1xbb_A          171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--------GSEVT-AMLEKGERMGC  241 (291)
T ss_dssp             CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHH-HHHHTTCCCCC
T ss_pred             CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--------HHHHH-HHHHcCCCCCC
Confidence            433222222456789999999988889999999999999999999 999986432        11111 11111111100


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                     +...+..+.+++.+||+.||++|||+.++++.|++++.+
T Consensus       242 ---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          242 ---------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             ---------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence                           112234488999999999999999999999999998753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=5.4e-38  Score=265.46  Aligned_cols=211  Identities=12%  Similarity=0.157  Sum_probs=150.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +++.||+|++...                                           
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4677788999999999999999  7899999998643                                           


Q ss_pred             CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|.               ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++......... 
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  157 (292)
T 3o0g_A           82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-  157 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC-
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc-
Confidence            111               1456789999999999999   899999999999999999999999999999876533221 


Q ss_pred             cCCCCcccCccccccccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---cccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEIV  230 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  230 (284)
                        .....||+.|+|||++.+.. ++.++|||||||++|+|++|..|+....    ........+.......   .+....
T Consensus       158 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          158 --YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             --CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             --ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC----CHHHHHHHHHHHhCCCChhhhhhhc
Confidence              12257899999999987765 8999999999999999999998875432    1111111111111111   011100


Q ss_pred             c---c---cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 D---P---AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~---~---~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .   .   ...................+.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            0   0   0000000000111223445789999999999999999999986

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=9.9e-39  Score=268.51  Aligned_cols=201  Identities=21%  Similarity=0.292  Sum_probs=143.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC---------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~---------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|.+     .+..||+|++...                                       
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv   93 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   93 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence            35677788999999999999998     2346999997643                                       


Q ss_pred             --CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|.                ....+.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  170 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence              111                1456788999999999999   8999999999999999999999999999998765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ....  ....+|+.|+|||++....++.++|||||||++|||++ |..||....     .......+.    ......  
T Consensus       171 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~-----~~~~~~~i~----~~~~~~--  237 (281)
T 1mp8_A          171 YYKA--SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGRIE----NGERLP--  237 (281)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHH----TTCCCC--
T ss_pred             cccc--ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC-----HHHHHHHHH----cCCCCC--
Confidence            2221  12456789999999988899999999999999999997 888886432     111211111    111000  


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                   .+...+..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus       238 -------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          238 -------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             -------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                         0112234578999999999999999999999999999764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=7.8e-38  Score=267.77  Aligned_cols=215  Identities=15%  Similarity=0.210  Sum_probs=157.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            4577788999999999999999  6899999998643                                           


Q ss_pred             -CC------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE----ecCCcceeeccccccc
Q 039895           90 -FP------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL----QEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 -~~------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~Dfg~a~~  146 (284)
                       +|                  .......++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence             11                  11456789999999999999   9999999999999999    7778899999999987


Q ss_pred             cCCCCccccCCCCcccCcccccccccc--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRT--------TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      ........    ...||+.|+|||++.        +..++.++|||||||++|||++|..||.......    .......
T Consensus       166 ~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~  237 (319)
T 4euu_A          166 LEDDEQFV----SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR----RNKEVMY  237 (319)
T ss_dssp             CCTTCCBC----CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG----GCHHHHH
T ss_pred             cCCCCcee----ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc----hhHHHHH
Confidence            75543221    256899999999875        5678999999999999999999999997533111    1112222


Q ss_pred             HHhhcC---ccccccc---ccc--cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          219 KYIENE---SFKEIVD---PAI--VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       219 ~~~~~~---~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                      ......   .+..+..   ..+  .................+.+++.+||+.||++|||+.|+++...+-
T Consensus       238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            222111   1111000   000  0011111123456677789999999999999999999999987753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.9e-38  Score=282.75  Aligned_cols=196  Identities=19%  Similarity=0.274  Sum_probs=148.9

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|..  +|..+|+|++...                                         
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            456788889999999999999998  8899999998654                                         


Q ss_pred             --CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe---cCCcceeeccccccccCC
Q 039895           90 --FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 --~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~Dfg~a~~~~~  149 (284)
                        +|.               +.....++.||+.||.|||   +.+|+||||||+|||++   .++.+||+|||++.....
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence              221               1556789999999999999   99999999999999998   457899999999987654


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .....   ....||+.|+|||++.+..++.++||||+||++|+|++|..||....     .   ........ .+... .
T Consensus       166 ~~~~~---~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----~---~~~~~~i~-~~~~~-~  232 (444)
T 3soa_A          166 EQQAW---FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-----Q---HRLYQQIK-AGAYD-F  232 (444)
T ss_dssp             TCCBC---CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----H---HHHHHHHH-HTCCC-C
T ss_pred             CCcee---ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-----H---HHHHHHHH-hCCCC-C
Confidence            33221   22579999999999999899999999999999999999999996432     1   11111111 11110 0


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..           +.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       233 ~~-----------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          233 PS-----------PEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             CT-----------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             Cc-----------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            00           001122344789999999999999999999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=9.8e-38  Score=279.97  Aligned_cols=209  Identities=16%  Similarity=0.195  Sum_probs=147.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||+||+|..  +|+.||||++...                                          
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46788889999999999999998  7899999998643                                          


Q ss_pred             -------CCC------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 -------FPF------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -------~~~------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                             +|.            ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus       141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  217 (464)
T 3ttj_A          141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  217 (464)
T ss_dssp             EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred             eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence                   000            0456679999999999999   899999999999999999999999999999876543


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh--------
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE--------  222 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------  222 (284)
                      ...    ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..    ....+...+.....        
T Consensus       218 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~----~~~~~~~i~~~lg~p~~~~~~~  289 (464)
T 3ttj_A          218 FMM----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD----YIDQWNKVIEQLGTPCPEFMKK  289 (464)
T ss_dssp             CCC--------CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCSCCHHHHTT
T ss_pred             ccc----CCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHhcCCCCHHHHHH
Confidence            221    22679999999999999999999999999999999999999996532    11111111111000        


Q ss_pred             ----------cC------cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          223 ----------NE------SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       223 ----------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                ..      .+...+...+..   ............+.+|+.+||+.||++|||+.|++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFP---ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             SCHHHHHHHTTSCCCCCCCHHHHSCGGGSC---CSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cchhhhhHhhcccccCCCChHHhCcccccc---cccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                      00      000000000000   0001122335668999999999999999999999863

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.1e-38  Score=271.30  Aligned_cols=200  Identities=20%  Similarity=0.308  Sum_probs=145.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcce----EEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPI----SVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~v----avK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+  ++..+    |+|.+...                                       
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v   94 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence            5688889999999999999998  56655    66766432                                       


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        ++                .....+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.......
T Consensus        95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence              00                01456789999999999999   8999999999999999999999999999998765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||....     ...+...+.    .....   
T Consensus       172 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~----~~~~~---  238 (327)
T 3lzb_A          172 KEYH-AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILE----KGERL---  238 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHH----TTCCC---
T ss_pred             cccc-ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHH----cCCCC---
Confidence            2211 112456889999999999999999999999999999999 999986432     112222111    11100   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                  +.+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus       239 ------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          239 ------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             ------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             ------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                        0011223347899999999999999999999999999874

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.6e-38  Score=268.52  Aligned_cols=211  Identities=16%  Similarity=0.172  Sum_probs=151.3

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..+.|...+.||+|+||+||+|.+  +++.||||++...                                         
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999999997  8899999998521                                         


Q ss_pred             -------------C----------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeec
Q 039895           90 -------------F----------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        90 -------------~----------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                                   +                ........++.||+.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~D  163 (308)
T 3g33_A           87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLAD  163 (308)
T ss_dssp             CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred             CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEee
Confidence                         0                111456789999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       141 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      ||++.........    ....||+.|+|||++.+..++.++|||||||++|+|++|..||....     .......+...
T Consensus       164 fg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~  234 (308)
T 3g33_A          164 FGLARIYSYQMAL----TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-----EADQLGKIFDL  234 (308)
T ss_dssp             CSCTTTSTTCCCS----GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS-----HHHHHHHHHHH
T ss_pred             CccccccCCCccc----CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHH
Confidence            9999876543322    12578999999999999999999999999999999999999986532     11111111111


Q ss_pred             hhcC---ccccccc---ccccCCCCC-CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          221 IENE---SFKEIVD---PAIVGEEGL-MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       221 ~~~~---~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....   .+.....   ......... ...........+.+|+.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            1111   1111000   000000000 00001123345789999999999999999999985

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.8e-38  Score=265.92  Aligned_cols=201  Identities=18%  Similarity=0.269  Sum_probs=152.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CCC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FPF   92 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~~   92 (284)
                      .++|...+.||+|+||+||+|.+ ++..||+|++...                                        +|.
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  102 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA  102 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence            35677778999999999999999 6678999998754                                        111


Q ss_pred             ----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           93 ----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        93 ----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                      ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..........  
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--  177 (283)
T 3gen_A          103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS--  177 (283)
T ss_dssp             TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS--
T ss_pred             CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccccc--
Confidence                            1567789999999999999   9999999999999999999999999999998765432221  


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                      .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||....        ......... ... . ...    
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--------~~~~~~~~~-~~~-~-~~~----  242 (283)
T 3gen_A          178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--------NSETAEHIA-QGL-R-LYR----  242 (283)
T ss_dssp             TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHHHHH-TTC-C-CCC----
T ss_pred             ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--------hhHHHHHHh-ccc-C-CCC----
Confidence            122457888999999998889999999999999999998 998886432        111111111 110 0 000    


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                               +......+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus       243 ---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          243 ---------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             ---------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence                     011123478999999999999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=8.5e-39  Score=271.41  Aligned_cols=209  Identities=21%  Similarity=0.226  Sum_probs=155.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe------CCcceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~---------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|.+      +++.||+|++...                                       
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3467778999999999999983      6889999998643                                       


Q ss_pred             -----CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 -----FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 -----~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                           +|.                ...++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  177 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence                 111                0456789999999999999   9999999999999999999999999999998876


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-------CCCccccHHHHHHHHh
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF-------DDGEDYRLQDLVKKYI  221 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~~  221 (284)
                      .............||..|+|||++.+..++.++||||||+++|+|++|..|+.....       ............... 
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  256 (302)
T 4e5w_A          178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL-  256 (302)
T ss_dssp             TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH-
T ss_pred             CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH-
Confidence            554333333336788899999999888899999999999999999999988642110       000001111111111 


Q ss_pred             hcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          222 ENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      ....               ..+.+...+..+.+|+.+||+.||++|||+.++++.|+++++
T Consensus       257 ~~~~---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          257 KEGK---------------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             HTTC---------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             hccC---------------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence            1100               001112233458899999999999999999999999999864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3.3e-38  Score=278.22  Aligned_cols=198  Identities=20%  Similarity=0.262  Sum_probs=143.7

Q ss_pred             cCCCCC-CeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           55 DDFDGG-KVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      ++|... ++||+|+||+||+|..  +|+.||||++...                                         +
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~  140 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC  140 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence            445443 6899999999999998  7889999998643                                         1


Q ss_pred             CC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceeeccccccccCCC
Q 039895           91 PF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        91 ~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~Dfg~a~~~~~~  150 (284)
                      |.                 +.....++.||+.||.|||   +.+|+||||||+|||++.   ++.+||+|||+++.....
T Consensus       141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~  217 (400)
T 1nxk_A          141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  217 (400)
T ss_dssp             CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence            11                 1456789999999999999   899999999999999997   788999999999876533


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ...    ....||+.|+|||++.+..++.++|||||||++|||++|..||......... ......+..    +.+. ..
T Consensus       218 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~i~~----~~~~-~~  287 (400)
T 1nxk_A          218 NSL----TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRM----GQYE-FP  287 (400)
T ss_dssp             -------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHHHHH----TCCC-CC
T ss_pred             Ccc----ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHHHHc----Cccc-CC
Confidence            221    2267899999999999999999999999999999999999999754321111 111111111    1100 00


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .           +........+.+|+.+||+.||++|||+.|+++.
T Consensus       288 ~-----------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          288 N-----------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             T-----------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             C-----------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0           0011223447899999999999999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-38  Score=273.33  Aligned_cols=194  Identities=15%  Similarity=0.220  Sum_probs=151.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~   91 (284)
                      .+.|...+.||+|+||.||+|..  ++..||+|++...                                        +|
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            46788889999999999999999  7889999998644                                        22


Q ss_pred             C----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec--CCcceeeccccccccCCCCcc
Q 039895           92 F----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE--ENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      .                +.....++.||+.||.|||   +.+|+||||||+|||++.  ++.+||+|||++.........
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            1                1567789999999999999   999999999999999987  789999999999887554332


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .    ...||+.|+|||++.+..++.++|||||||++|+|++|..||....        ........... ....  +  
T Consensus       161 ~----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~-~~~~--~--  223 (321)
T 1tki_A          161 R----LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIENIMNA-EYTF--D--  223 (321)
T ss_dssp             E----EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHT-CCCC--C--
T ss_pred             c----cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHcC-CCCC--C--
Confidence            2    1568999999999998889999999999999999999999996532        11222221111 1000  0  


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              .+.....+..+.+++.+||+.||++|||+.|+++
T Consensus       224 --------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          224 --------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             --------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                    0001122345889999999999999999999986

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2e-38  Score=276.07  Aligned_cols=196  Identities=20%  Similarity=0.299  Sum_probs=150.6

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|..  +|..||+|++...                                         
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            456788899999999999999998  7899999998643                                         


Q ss_pred             --CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceeeccccccccCC
Q 039895           90 --FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 --~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~Dfg~a~~~~~  149 (284)
                        +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++   .+||+|||++.....
T Consensus       107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence              111               1566789999999999999   89999999999999998654   599999999987754


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....    ....||+.|+|||++.+..++.++|||||||++|+|++|..||....     .   ........ .+.... 
T Consensus       184 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----~---~~~~~~i~-~~~~~~-  249 (362)
T 2bdw_A          184 SEAW----HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----Q---HRLYAQIK-AGAYDY-  249 (362)
T ss_dssp             CCSC----CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHHHH-HTCCCC-
T ss_pred             Cccc----ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----H---HHHHHHHH-hCCCCC-
Confidence            3321    22579999999999999899999999999999999999999986432     1   11111111 111100 


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .           .+.....+..+.+|+.+||+.||++|||+.|+++.
T Consensus       250 ~-----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          250 P-----------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             C-----------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             C-----------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0           00111223457899999999999999999998753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=277.80  Aligned_cols=200  Identities=20%  Similarity=0.276  Sum_probs=150.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+       ++..||||++...                                      
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            5677788999999999999995       4568999998643                                      


Q ss_pred             ----CCCc----------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceeec
Q 039895           90 ----FPFS----------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFD  140 (284)
Q Consensus        90 ----~~~~----------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~D  140 (284)
                          +|..                      ...+.++.||+.||.|||   +.+|+||||||+|||++.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence                1111                      346679999999999999   99999999999999999555   599999


Q ss_pred             cccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHH
Q 039895          141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKK  219 (284)
Q Consensus       141 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  219 (284)
                      ||+++......... ......||+.|+|||++.+..++.++|||||||++|||++ |..||....        .......
T Consensus       228 FG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--------~~~~~~~  298 (367)
T 3l9p_A          228 FGMARDIYRAGYYR-KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQEVLEF  298 (367)
T ss_dssp             CHHHHHHHHHSSCT-TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHH
T ss_pred             Cccccccccccccc-cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHH
Confidence            99997653222111 1122567899999999988899999999999999999998 888886432        1122221


Q ss_pred             HhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .. .+....               .+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+
T Consensus       299 i~-~~~~~~---------------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          299 VT-SGGRMD---------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HH-TTCCCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-cCCCCC---------------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            11 111000               011223347899999999999999999999999998875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.3e-37  Score=259.85  Aligned_cols=194  Identities=17%  Similarity=0.199  Sum_probs=151.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC---------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+.+..||||++...                                             
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH   89 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence            56777889999999999999999999999998643                                             


Q ss_pred             CC-----------------CchhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 FP-----------------FSVSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ~~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                      +|                 ....++.++.|++.||.|||   +.+  |+||||||+|||++.++.++|+|||++......
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~  166 (271)
T 3kmu_A           90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP  166 (271)
T ss_dssp             CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT
T ss_pred             ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeeccc
Confidence            11                 11567889999999999999   888  999999999999999999999999887543221


Q ss_pred             CccccCCCCcccCccccccccccCCCCCc---chhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSE---KSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK  227 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
                              ...||+.|+|||++.+..++.   ++|||||||++|||++|..||....        ...............
T Consensus       167 --------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~  230 (271)
T 3kmu_A          167 --------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS--------NMEIGMKVALEGLRP  230 (271)
T ss_dssp             --------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC--------HHHHHHHHHHSCCCC
T ss_pred             --------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC--------hHHHHHHHHhcCCCC
Confidence                    146899999999988765544   7999999999999999999986432        111111111111111


Q ss_pred             ccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          228 EIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      . .              +...+..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus       231 ~-~--------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          231 T-I--------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             C-C--------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             C-C--------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            1 0              11123348899999999999999999999999999865

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.5e-38  Score=274.37  Aligned_cols=190  Identities=21%  Similarity=0.254  Sum_probs=145.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||+|++...                                          
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            47899999999999999999998  7899999998642                                          


Q ss_pred             ---CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence               1211               456679999999999999   8999999999999999999999999999997643322


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-cccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-SFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  230 (284)
                      ..   .....||+.|+|||++.+..++.++|||||||++|||++|..||....        ............ .++   
T Consensus       179 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~~~~p---  244 (353)
T 3txo_A          179 VT---TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILNDEVVYP---  244 (353)
T ss_dssp             ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC---
T ss_pred             cc---ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCCCC---
Confidence            11   122679999999999988889999999999999999999999997532        122222221111 011   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH------HHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI------VQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~ev~~  275 (284)
                                     ......+.+|+.+||+.||++||++      .|+++
T Consensus       245 ---------------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          245 ---------------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             ---------------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             ---------------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                           1122347899999999999999998      66654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.2e-39  Score=284.86  Aligned_cols=203  Identities=18%  Similarity=0.290  Sum_probs=153.4

Q ss_pred             HHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------
Q 039895           48 DELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        48 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------   89 (284)
                      .++....++|...+.||+|+||+||+|..  +++.||+|++...                                    
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            34444567899999999999999999999  7889999998542                                    


Q ss_pred             --------CCCc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 --------FPFS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 --------~~~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                              +|..              .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence                    2211              456779999999999999   999999999999999999999999999999877


Q ss_pred             CCCCccccCCCCcccCccccccccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTGD----FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN  223 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (284)
                      ........  ....||+.|+|||++....    ++.++|||||||++|||++|..||....        ...........
T Consensus       219 ~~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~~~  288 (410)
T 3v8s_A          219 NKEGMVRC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIMNH  288 (410)
T ss_dssp             CTTSEEEC--CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTH
T ss_pred             ccCCcccc--cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC--------hhhHHHHHHhc
Confidence            55433222  2368999999999987665    7899999999999999999999997532        11112211111


Q ss_pred             CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHHH
Q 039895          224 ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD--RPTIVQVAKQ  276 (284)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~ev~~~  276 (284)
                      .....             +|.....+..+.+|+.+||..+|.+  ||++.||+++
T Consensus       289 ~~~~~-------------~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          289 KNSLT-------------FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHCC-------------CCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ccccc-------------CCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            00000             0001112234789999999999988  9999999753

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.6e-38  Score=275.78  Aligned_cols=148  Identities=26%  Similarity=0.327  Sum_probs=114.0

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|.+  +|+.||||++...                                         
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            457888889999999999999998  7899999988543                                         


Q ss_pred             -----CCCc-------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 -----FPFS-------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 -----~~~~-------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                           +|..             ..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+....
T Consensus        87 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           87 YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence                 1110             456678999999999999   9999999999999999999999999999998764311


Q ss_pred             cc------------------ccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          152 TH------------------INDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       152 ~~------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ..                  ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence            10                  111123579999999999876 57899999999999999999999999753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=7.7e-38  Score=264.06  Aligned_cols=210  Identities=20%  Similarity=0.265  Sum_probs=146.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC-------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      ++|...+.||+|+||+||+|.. +|+.||+|++...                                           +
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            4577778999999999999999 7899999998543                                           1


Q ss_pred             C---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 P---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |               .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.........  
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--  156 (288)
T 1ob3_A           82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--  156 (288)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             cCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc--
Confidence            1               01456789999999999999   899999999999999999999999999999876432211  


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccccc--
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEI--  229 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--  229 (284)
                       .....||+.|+|||++.+. .++.++|||||||++|||++|..||....     .......+.......   .++..  
T Consensus       157 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          157 -YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-----EADQLMRIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHHCCCChhhchhhhc
Confidence             1124689999999998764 58999999999999999999999986432     111111111111111   01110  


Q ss_pred             ---ccccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 ---VDPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ---~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                         .++.........+. ........+.+|+.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence               01111100000000 01122345789999999999999999999975

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2e-38  Score=286.77  Aligned_cols=200  Identities=22%  Similarity=0.319  Sum_probs=154.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~   91 (284)
                      ..+|...+.||+|+||.||+|.+  .+..||||++...                                        +|
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            34566678899999999999999  5889999998754                                        11


Q ss_pred             C-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           92 F-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        92 ~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      .                 ...++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus       299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  375 (495)
T 1opk_A          299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  375 (495)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence            1                 0456788999999999999   9999999999999999999999999999998775433222


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .  ....+|+.|+|||++....++.++|||||||++|||++ |..||....     .......+.    .+..       
T Consensus       376 ~--~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~~~~----~~~~-------  437 (495)
T 1opk_A          376 H--AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLE----KDYR-------  437 (495)
T ss_dssp             C--TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHH----TTCC-------
T ss_pred             c--CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHH----cCCC-------
Confidence            1  12456789999999998899999999999999999999 888886432     112222111    1100       


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                              .+.+..++..+.+|+.+||+.||++|||+.+|++.|+.+.+
T Consensus       438 --------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          438 --------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             --------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence                    00112233458899999999999999999999999998764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.2e-38  Score=271.47  Aligned_cols=203  Identities=21%  Similarity=0.325  Sum_probs=143.5

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCc---ceEEEeecCC--------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDR---PISVMKFEDT--------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~---~vavK~~~~~--------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|.+  ++.   .||||++...                                      
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            456788889999999999999998  332   7999998643                                      


Q ss_pred             -----------CC---------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcce
Q 039895           90 -----------FP---------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ  137 (284)
Q Consensus        90 -----------~~---------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~k  137 (284)
                                 +|                     ....+..++.|++.||.|||   +.+|+||||||+|||++.++.+|
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k  177 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC  177 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence                       01                     00346789999999999999   89999999999999999999999


Q ss_pred             eeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHH
Q 039895          138 LFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDL  216 (284)
Q Consensus       138 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~  216 (284)
                      |+|||++........... .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||....     .......
T Consensus       178 l~Dfg~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~  251 (323)
T 3qup_A          178 VADFGLSRKIYSGDYYRQ-GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-----NAEIYNY  251 (323)
T ss_dssp             ECCCCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHH
T ss_pred             Eeeccccccccccccccc-cccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC-----hHHHHHH
Confidence            999999987654432211 112456889999999998899999999999999999999 888886432     1111111


Q ss_pred             HHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      +   ..... ..               .+...+..+.+++.+||+.||++|||+.++++.|+++++.
T Consensus       252 ~---~~~~~-~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          252 L---IGGNR-LK---------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             H---HTTCC-CC---------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             H---hcCCC-CC---------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            1   11110 00               0112234488999999999999999999999999999753

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.1e-38  Score=261.92  Aligned_cols=201  Identities=20%  Similarity=0.305  Sum_probs=155.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FP--   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~--   91 (284)
                      ++|...+.||+|+||.||+|.+ ++..||+|++...                                        +|  
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH   87 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence            4577778999999999999999 7889999998754                                        11  


Q ss_pred             --------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 --------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 --------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                    .......++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++..........  .
T Consensus        88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~  162 (267)
T 3t9t_A           88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS--S  162 (267)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS--T
T ss_pred             CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccccc--c
Confidence                          11456789999999999999   9999999999999999999999999999998764432211  1


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||....        .......... +. ... .     
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~i~~-~~-~~~-~-----  226 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDIST-GF-RLY-K-----  226 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHT-TC-CCC-C-----
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--------HHHHHHHHhc-CC-cCC-C-----
Confidence            22457889999999988889999999999999999999 888876432        1122211111 10 000 0     


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                              +...+..+.+++.+||+.||++|||+.++++.|+++.+++
T Consensus       227 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (267)
T 3t9t_A          227 --------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG  266 (267)
T ss_dssp             --------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             --------CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                    0111234789999999999999999999999999998764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=3.2e-38  Score=282.53  Aligned_cols=202  Identities=23%  Similarity=0.305  Sum_probs=150.4

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCC
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPF   92 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~   92 (284)
                      ..++|...+.||+|+||.||+|.+ .+..||||++...                                       +|.
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~  261 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS  261 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhc
Confidence            345566778899999999999999 5567999998754                                       111


Q ss_pred             -----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           93 -----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        93 -----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                       ...++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++..........
T Consensus       262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  338 (452)
T 1fmk_A          262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  338 (452)
T ss_dssp             TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence                             1456789999999999999   99999999999999999999999999999987654322211


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                        ....+|+.|+|||++....++.++|||||||++|||++ |..||....        ........ ..+..        
T Consensus       339 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i-~~~~~--------  399 (452)
T 1fmk_A          339 --QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQV-ERGYR--------  399 (452)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHH-HTTCC--------
T ss_pred             --cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-HcCCC--------
Confidence              12456889999999988899999999999999999999 888886432        11111111 11100        


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                             .+.+..++..+.+|+.+||+.||++|||+.+|++.|+++..+
T Consensus       400 -------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          400 -------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             -------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             -------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence                   011122344588999999999999999999999999988754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.1e-37  Score=269.67  Aligned_cols=194  Identities=21%  Similarity=0.283  Sum_probs=144.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +++.||+|++...                                           
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            5688889999999999999998  6899999998643                                           


Q ss_pred             --CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence              111               1456779999999999999   99999999999999999999999999999976432221


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .   .....||+.|+|||++.+..++.++|||||||++|||++|..||...........................     
T Consensus       166 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-----  237 (345)
T 3a8x_A          166 T---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-----  237 (345)
T ss_dssp             C---BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-----
T ss_pred             c---ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-----
Confidence            1   12367999999999999999999999999999999999999999653311111111111111111111110     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI  270 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  270 (284)
                       +          +......+.+|+.+||+.||++||++
T Consensus       238 -~----------p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          238 -I----------PRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             -C----------CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             -C----------CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence             0          01122347899999999999999996

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=9e-38  Score=273.93  Aligned_cols=200  Identities=22%  Similarity=0.276  Sum_probs=154.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEeC---------CcceEEEeecCC------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQ---------DRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~---------~~~vavK~~~~~------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|.+.         +..||||++...                                    
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  148 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG  148 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence            56777789999999999999972         246999998654                                    


Q ss_pred             -------CC-------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -------FP-------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -------~~-------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                             +|                               ....++.++.||+.||.|||   +.+|+||||||+|||++
T Consensus       149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~  225 (382)
T 3tt0_A          149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT  225 (382)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEc
Confidence                   11                               12356789999999999999   89999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~  210 (284)
                      .++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||....      
T Consensus       226 ~~~~~kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------  298 (382)
T 3tt0_A          226 EDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------  298 (382)
T ss_dssp             TTCCEEECSCSCCCCSSCCCTTC-CCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred             CCCcEEEcccCcccccccccccc-cccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence            99999999999998775433221 1122467889999999999999999999999999999999 888886432      


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                        ......... .......               +..++..+.+|+.+||+.||++|||+.||++.|+++..
T Consensus       299 --~~~~~~~~~-~~~~~~~---------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  352 (382)
T 3tt0_A          299 --VEELFKLLK-EGHRMDK---------------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  352 (382)
T ss_dssp             --HHHHHHHHH-TTCCCCC---------------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHH-cCCCCCC---------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence              122222211 1111000               11123348899999999999999999999999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-37  Score=265.04  Aligned_cols=187  Identities=21%  Similarity=0.300  Sum_probs=148.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..  +|+.||+|++...                                           
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            5788889999999999999998  7899999998542                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......  
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~--  160 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT--  160 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB--
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCcc--
Confidence             2211               456678999999999999   9999999999999999999999999999998764322  


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....||+.|+|||++.+..++.++|||||||++|||++|..||....        ........... ...      
T Consensus       161 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~-~~~------  221 (318)
T 1fot_A          161 ----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILNA-ELR------  221 (318)
T ss_dssp             ----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHC-CCC------
T ss_pred             ----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhC-CCC------
Confidence                12679999999999999999999999999999999999999996532        11222222111 100      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                      +          +......+.+++.+||+.||++||     ++.|+++
T Consensus       222 ~----------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          222 F----------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             C----------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             C----------CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            0          011123478999999999999999     8888874

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.3e-37  Score=261.66  Aligned_cols=201  Identities=21%  Similarity=0.332  Sum_probs=151.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeC-----CcceEEEeecCC---------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQ-----DRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~-----~~~vavK~~~~~---------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+.     +..||+|++...                                       
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v   90 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII   90 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence            467888899999999999999972     235999998753                                       


Q ss_pred             --CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|.                ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.......
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence              111                1456788999999999999   9999999999999999999999999999998765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ....  ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||....     .......+..   .....   
T Consensus       168 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~-----~~~~~~~~~~---~~~~~---  234 (281)
T 3cc6_A          168 YYKA--SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-----NKDVIGVLEK---GDRLP---  234 (281)
T ss_dssp             -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----GGGHHHHHHH---TCCCC---
T ss_pred             cccc--ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC-----hHHHHHHHhc---CCCCC---
Confidence            2221  12457889999999988899999999999999999998 999986432     1122222111   10000   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                   .+...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus       235 -------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          235 -------------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             -------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence                         0111223478999999999999999999999999998753

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=6.9e-38  Score=267.23  Aligned_cols=204  Identities=18%  Similarity=0.326  Sum_probs=144.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|.+  +++.||||++...                                          
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            35788889999999999999997  8899999998653                                          


Q ss_pred             ------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 ------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 ------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                            +|.               ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence                  111               0456789999999999999   8999999999999999999999999999998765


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      .............||+.|+|||++.+..++.++|||||||++|+|++|..||....        ................
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~~~  239 (311)
T 3ork_A          168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--------PVSVAYQHVREDPIPP  239 (311)
T ss_dssp             --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHCCCCCH
T ss_pred             ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcCCCCCc
Confidence            44333222233578999999999999999999999999999999999999986432        1111112111111110


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHH-HHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV-AKQLRQIY  281 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev-~~~L~~l~  281 (284)
                      .             ......+..+.+++.+||+.||++||++.++ .+.|..+.
T Consensus       240 ~-------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          240 S-------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             H-------------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             c-------------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            0             0011123447899999999999999966554 45555543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.1e-38  Score=273.92  Aligned_cols=210  Identities=22%  Similarity=0.254  Sum_probs=156.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe------CCcceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~---------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+      ++..||||++...                                       
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5677788999999999999984      6788999998654                                       


Q ss_pred             ----CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ----FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ----~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                          +|.                ...++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence                111                1456789999999999999   89999999999999999999999999999988765


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC------CCccccHHHHHHHHhhc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD------DGEDYRLQDLVKKYIEN  223 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~  223 (284)
                      ............||+.|+|||++.+..++.++|||||||++|+|++|..||......      .................
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE  259 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence            443333333356888999999998888999999999999999999999998542100      00000000011111111


Q ss_pred             CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          224 ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      +.               ..+.+...+..+.+|+.+||+.||++|||+.|+++.|+.+..
T Consensus       260 ~~---------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          260 GQ---------------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             TC---------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             cc---------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            00               001112234458899999999999999999999999998764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=262.79  Aligned_cols=192  Identities=17%  Similarity=0.252  Sum_probs=145.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +++.||||++...                                           
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            6788889999999999999998  7899999987421                                           


Q ss_pred             --------------------------CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEE
Q 039895           90 --------------------------FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIV  129 (284)
Q Consensus        90 --------------------------~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NIL  129 (284)
                                                +|              .......++.||+.||.|||   +.+|+||||||+|||
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil  169 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLL  169 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEE
Confidence                                      11              01567889999999999999   899999999999999


Q ss_pred             EecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 039895          130 LQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSSHFD  206 (284)
Q Consensus       130 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~G~il~elltg~~p~~~~~~~  206 (284)
                      ++.++.+||+|||++..........   ....||+.|+|||++.+..   ++.++|||||||++|+|++|..||....  
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--  244 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSDALL---SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--  244 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSSCEE---CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS--
T ss_pred             ECCCCCEEEecCCCccccccccccc---cCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc--
Confidence            9999999999999998765433221   1257899999999987665   4788999999999999999999986432  


Q ss_pred             CCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          207 DGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                            ......... ......              +.....+..+.+++.+||+.||++|||+.|+++
T Consensus       245 ------~~~~~~~~~-~~~~~~--------------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          245 ------IMCLHSKIK-SQALEF--------------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             ------HHHHHHHHH-HCCCCC--------------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ------HHHHHHHHh-cccCCC--------------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence                  111111111 111100              001112234789999999999999999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.6e-38  Score=281.11  Aligned_cols=204  Identities=21%  Similarity=0.260  Sum_probs=153.4

Q ss_pred             HHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------
Q 039895           47 ADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------   89 (284)
Q Consensus        47 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------   89 (284)
                      +.++...+++|...++||+|+||+||+|..  +++.||+|++...                                   
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            445555668899999999999999999999  6789999998642                                   


Q ss_pred             ---------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           90 ---------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        90 ---------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                               +|..                .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla  222 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC  222 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence                     1211                456679999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCccccCCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHH
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK  219 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~  219 (284)
                      +..........  ....||+.|+|||++.     ...++.++|||||||++|||++|..||....     .......+..
T Consensus       223 ~~~~~~~~~~~--~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~  295 (437)
T 4aw2_A          223 LKLMEDGTVQS--SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMN  295 (437)
T ss_dssp             EECCTTSCEEC--CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHT
T ss_pred             hhcccCCCccc--ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-----hhHHHHhhhh
Confidence            87655433222  2267999999999986     5678999999999999999999999997532     1111111111


Q ss_pred             HhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCC--CCCHHHHHH
Q 039895          220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGD--RPTIVQVAK  275 (284)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~ev~~  275 (284)
                      ......++...               ......+.+|+.+||..+|++  ||++.|+++
T Consensus       296 ~~~~~~~p~~~---------------~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          296 HKERFQFPTQV---------------TDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHCCCCSSC---------------CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             ccccccCCccc---------------ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            00011111110               012234789999999888888  999999875

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.2e-37  Score=277.06  Aligned_cols=140  Identities=23%  Similarity=0.269  Sum_probs=120.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ..|...+.||+|+||+||+|..  +++.||||++...                                           
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  176 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM  176 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence            4577788999999999999998  6899999998654                                           


Q ss_pred             ---CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc--ceeeccccccccC
Q 039895           90 ---FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV--AQLFDFTLSLSIP  148 (284)
Q Consensus        90 ---~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~Dfg~a~~~~  148 (284)
                         +|                .......++.||+.||.|||   +.+|+||||||+|||++.++.  +||+|||++....
T Consensus       177 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          177 TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             EECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             EEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence               11                11456789999999999999   899999999999999999887  9999999997654


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ....      ...||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus       254 ~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          254 QRVY------TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CCCC------SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             Cccc------ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            3322      257899999999999999999999999999999999999998653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.8e-38  Score=270.61  Aligned_cols=192  Identities=21%  Similarity=0.270  Sum_probs=149.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|..  +|..||+|++...                                           
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4577788999999999999999  7899999998642                                           


Q ss_pred             ----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC----cceeeccccccc
Q 039895           90 ----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN----VAQLFDFTLSLS  146 (284)
Q Consensus        90 ----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~Dfg~a~~  146 (284)
                          +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++    .+||+|||++..
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence                111               1567789999999999999   99999999999999999887    799999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cc
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ES  225 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~  225 (284)
                      .......    ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ........... ..
T Consensus       168 ~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~  235 (326)
T 2y0a_A          168 IDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANVSAVNYE  235 (326)
T ss_dssp             CCTTSCC----CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHTCCC
T ss_pred             CCCCCcc----ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHHhcCCC
Confidence            7543221    12579999999999998899999999999999999999999986432        11111111110 00


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +..              ......+..+.+|+.+||+.||++|||+.|+++
T Consensus       236 ~~~--------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          236 FED--------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             CCH--------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCc--------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            000              001122344789999999999999999999986

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9e-38  Score=263.44  Aligned_cols=195  Identities=20%  Similarity=0.276  Sum_probs=152.7

Q ss_pred             eeeecCCceEEEEEe----CCcceEEEeecCC-----------------------------------------CC-----
Q 039895           62 VIMKCLFYKLYKGFL----QDRPISVMKFEDT-----------------------------------------FP-----   91 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-----------------------------------------~~-----   91 (284)
                      .||+|+||.||+|.+    ++..||+|++...                                         +|     
T Consensus        17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L   96 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL   96 (287)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEH
T ss_pred             cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCCH
Confidence            899999999999986    5778999999763                                         11     


Q ss_pred             -----------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           92 -----------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        92 -----------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                                 ....+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++................
T Consensus        97 ~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  173 (287)
T 1u59_A           97 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  173 (287)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred             HHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccc
Confidence                       11567789999999999999   8999999999999999999999999999998876544333333335


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      .||+.|+|||++.+..++.++||||||+++|+|++ |..||....     .......    ...+....           
T Consensus       174 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~----i~~~~~~~-----------  233 (287)
T 1u59_A          174 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GPEVMAF----IEQGKRME-----------  233 (287)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----THHHHHH----HHTTCCCC-----------
T ss_pred             cccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHH----HhcCCcCC-----------
Confidence            67899999999988889999999999999999999 999986432     1111111    11111100           


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                          .+...+..+.+++..||+.||++|||+.++++.|+++..+
T Consensus       234 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  273 (287)
T 1u59_A          234 ----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  273 (287)
T ss_dssp             ----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                0112234588999999999999999999999999999865

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.8e-38  Score=271.76  Aligned_cols=212  Identities=14%  Similarity=0.154  Sum_probs=156.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-C---------CcceEEEeecCC-----------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-Q---------DRPISVMKFEDT-----------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~---------~~~vavK~~~~~-----------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.. .         ++.||+|++...                                   
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~  121 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT  121 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence            5788889999999999999998 2         789999998543                                   


Q ss_pred             -----------------CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC--
Q 039895           90 -----------------FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN--  134 (284)
Q Consensus        90 -----------------~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~--  134 (284)
                                       +|                ....++.++.||+.||.|||   +.+|+||||||+|||++.++  
T Consensus       122 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~~  198 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQS  198 (352)
T ss_dssp             CCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEEE
T ss_pred             hhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCCc
Confidence                             11                11556789999999999999   89999999999999999998  


Q ss_pred             cceeeccccccccCCCCccc----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          135 VAQLFDFTLSLSIPEGETHI----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       135 ~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      .+||+|||+++.+.......    .......||+.|+|||++.+..++.++|||||||++|||++|..||....   ...
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---~~~  275 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL---PNT  275 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT---TCH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC---cCH
Confidence            89999999998765432111    11123579999999999999899999999999999999999999986432   011


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ............  ......+....         ....+..+.+|+.+||+.||++|||+.+|++.|+++.++
T Consensus       276 ~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          276 EDIMKQKQKFVD--KPGPFVGPCGH---------WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             HHHHHHHHHHHH--SCCCEECTTSC---------EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccC--Chhhhhhhccc---------cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            112222211111  11111111000         001123488999999999999999999999999999864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.2e-38  Score=264.96  Aligned_cols=197  Identities=23%  Similarity=0.289  Sum_probs=149.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------------CCCc
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------------FPFS   93 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------------~~~~   93 (284)
                      .++|...+.||+|+||.||+|...|+.||||++...                                        +|..
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   99 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK   99 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred             hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCC
Confidence            467888889999999999999999999999998754                                        1110


Q ss_pred             -----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           94 -----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        94 -----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                       .....++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++........    
T Consensus       100 ~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~----  172 (278)
T 1byg_A          100 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD----  172 (278)
T ss_dssp             EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred             CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccccc----
Confidence                             345789999999999999   89999999999999999999999999999876543322    


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                        ...+++.|+|||++.+..++.++||||||+++|+|++ |..||....     .......    ...+..     ..  
T Consensus       173 --~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----~~~~~~~----~~~~~~-----~~--  234 (278)
T 1byg_A          173 --TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPR----VEKGYK-----MD--  234 (278)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----GGGHHHH----HTTTCC-----CC--
T ss_pred             --CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHH----HhcCCC-----CC--
Confidence              1457889999999988889999999999999999998 888886432     1111111    111100     00  


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                              .+...+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus       235 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          235 --------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence                    0112234588999999999999999999999999998753

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-37  Score=265.99  Aligned_cols=200  Identities=21%  Similarity=0.350  Sum_probs=143.8

Q ss_pred             CCCCCeeeecCCceEEEEEe--CC----cceEEEeecCC-----------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QD----RPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~----~~vavK~~~~~-----------------------------------------   89 (284)
                      |...+.||+|+||.||+|.+  ++    ..||||++...                                         
T Consensus        46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  125 (333)
T 1mqb_A           46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT  125 (333)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence            33457899999999999998  22    35999998754                                         


Q ss_pred             -CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|.                ...++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++........
T Consensus       126 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  202 (333)
T 1mqb_A          126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  202 (333)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence             111                1457789999999999999   89999999999999999999999999999987654332


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      .........+|+.|+|||++.+..++.++|||||||++|||++ |..||....        ..............     
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~~~~~~~~~~~~-----  269 (333)
T 1mqb_A          203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--------NHEVMKAINDGFRL-----  269 (333)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTCCC-----
T ss_pred             cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHCCCcC-----
Confidence            2222222456788999999998899999999999999999999 999986432        11112111111000     


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                 +.+...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus       270 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          270 -----------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             -----------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                       00112234478999999999999999999999999998753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.4e-37  Score=261.16  Aligned_cols=201  Identities=21%  Similarity=0.320  Sum_probs=155.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCC-
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPF-   92 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~-   92 (284)
                      .++|...+.||+|+||.||+|.. ++..||+|++...                                       +|. 
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   91 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN   91 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCC
Confidence            35677788999999999999999 6678999998754                                       111 


Q ss_pred             ----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           93 ----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        93 ----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                                      ....+.++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++........... 
T Consensus        92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-  167 (279)
T 1qpc_A           92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-  167 (279)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC-
T ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc-
Confidence                            1456789999999999999   99999999999999999999999999999987755432221 


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                       ....+++.|+|||++.+..++.++||||||+++|||++ |..||....        ......... .+. ...      
T Consensus       168 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~-~~~-~~~------  230 (279)
T 1qpc_A          168 -EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------NPEVIQNLE-RGY-RMV------  230 (279)
T ss_dssp             -TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHHH-TTC-CCC------
T ss_pred             -cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--------HHHHHHHHh-ccc-CCC------
Confidence             12457889999999988889999999999999999999 888886432        111111111 110 000      


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                              .+...+..+.+++.+||+.||++|||+.++++.|+++..+
T Consensus       231 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          231 --------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence                    0111233488999999999999999999999999998753

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=5.7e-38  Score=271.23  Aligned_cols=191  Identities=21%  Similarity=0.298  Sum_probs=148.6

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      ...++|...+.||+|+||.||+|..  +|+.||+|++...                                        
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            3557899999999999999999999  7899999998642                                        


Q ss_pred             -----CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  170 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  170 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence                 2211               456679999999999999   89999999999999999999999999999976533


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-cccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-SFKE  228 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  228 (284)
                      ....   .....||+.|+|||++.+..++.++|||||||++|||++|..||....        ............ .++ 
T Consensus       171 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p-  238 (345)
T 1xjd_A          171 GDAK---TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--------EEELFHSIRMDNPFYP-  238 (345)
T ss_dssp             TTCC---BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC-
T ss_pred             CCCc---ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCCCCCC-
Confidence            2221   123679999999999999999999999999999999999999996432        112222211111 111 


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHH-HHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIV-QVA  274 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-ev~  274 (284)
                                       ......+.+|+.+||+.||++||++. +++
T Consensus       239 -----------------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          239 -----------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             -----------------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             -----------------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                             01223478999999999999999997 654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.3e-37  Score=270.77  Aligned_cols=191  Identities=21%  Similarity=0.300  Sum_probs=146.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..  +++.||+|++...                                           
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5688889999999999999998  7889999988533                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..+......
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  171 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI  171 (384)
T ss_dssp             CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCce
Confidence             111               1456789999999999999   999999999999999999999999999999876543222


Q ss_pred             ccCCCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEI  229 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  229 (284)
                          ....||+.|+|||++..   ..++.++|||||||++|||++|..||....     .............. ..+   
T Consensus       172 ----~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-----~~~~~~~~~~~~~~~~~~---  239 (384)
T 4fr4_A          172 ----TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS-----STSSKEIVHTFETTVVTY---  239 (384)
T ss_dssp             ----CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCT-----TSCHHHHHHHHHHCCCCC---
T ss_pred             ----eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCC-----CccHHHHHHHHhhcccCC---
Confidence                22679999999999864   458999999999999999999999996433     11122222221111 001   


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-HHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-IVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~ev~~  275 (284)
                                     +...+..+.+|+.+||+.||++||+ +.+|++
T Consensus       240 ---------------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          240 ---------------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             ---------------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             ---------------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence                           0112234789999999999999998 666653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.1e-37  Score=267.53  Aligned_cols=196  Identities=21%  Similarity=0.281  Sum_probs=148.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||+||+|..  +++.||||++...                                          
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            36788889999999999999998  7899999998533                                          


Q ss_pred             CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..+.......
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            121               1567889999999999999   9999999999999999999999999999997664322211


Q ss_pred             cCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                       ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.....   .......+    .......      
T Consensus       163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~~~----~~~~~~~------  228 (323)
T 3tki_A          163 -LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD---SCQEYSDW----KEKKTYL------  228 (323)
T ss_dssp             -CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT---TSHHHHHH----HTTCTTS------
T ss_pred             -ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHH----hcccccC------
Confidence             1122679999999999987765 7789999999999999999999965331   11111111    1110000      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               +........+.+|+.+||+.||++|||+.|+++
T Consensus       229 ---------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          229 ---------NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             ---------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                     001122334779999999999999999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=5.1e-38  Score=269.69  Aligned_cols=196  Identities=19%  Similarity=0.242  Sum_probs=128.7

Q ss_pred             CCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------CCC------
Q 039895           60 GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------FPF------   92 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------~~~------   92 (284)
                      .+.||+|+||+||+|..  +++.||||++...                                       +|.      
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            57899999999999999  6899999998654                                       111      


Q ss_pred             ---------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceeeccccccccCCCCccccCCCCc
Q 039895           93 ---------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        93 ---------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                               +.....++.||+.||.|||   +.+|+||||||+|||++.++   .+||+|||++..........   ...
T Consensus        96 ~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~  169 (325)
T 3kn6_A           96 RIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL---KTP  169 (325)
T ss_dssp             HHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc---ccc
Confidence                     1567789999999999999   99999999999999998765   79999999998665432221   125


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL  240 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
                      .||+.|+|||++.+..++.++|||||||++|+|++|..||........ ........... ..+..            ..
T Consensus       170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i-~~~~~------------~~  235 (325)
T 3kn6_A          170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKI-KKGDF------------SF  235 (325)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHH-TTTCC------------CC
T ss_pred             CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHH-HcCCC------------CC
Confidence            689999999999999999999999999999999999999975431110 11112222111 11111            00


Q ss_pred             CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..+.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            11112234456889999999999999999998863

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=7.4e-38  Score=274.01  Aligned_cols=216  Identities=15%  Similarity=0.132  Sum_probs=156.6

Q ss_pred             ccCchHHHHHHHHhhCCCC-CCcceecHHHHHHH---------------------hcCCCCCCeeeecCCceEEEEEe--
Q 039895           21 LGNGKILLEKLIASSNGKH-NPIRSFSADELKTA---------------------TDDFDGGKVIMKCLFYKLYKGFL--   76 (284)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~---------------------~~~f~~~~~lg~G~~g~Vy~~~~--   76 (284)
                      ...|....++.++...+.. .........++...                     .+.|...+.||+|+||+||+|.+  
T Consensus        17 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~   96 (377)
T 3byv_A           17 QGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQE   96 (377)
T ss_dssp             CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTCC-CCEEEEEESSSCCCEEEEEEEEEEEETTEEEEEEEC-C
T ss_pred             CCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhcCCCCcEEEEeecCCCCceEEEcceeecCCCEEEEEEEECC
Confidence            3445566677776655544 44444555555443                     23455568899999999999997  


Q ss_pred             CCcceEEEeecCC--------------------------------C--CC----------------------------c-
Q 039895           77 QDRPISVMKFEDT--------------------------------F--PF----------------------------S-   93 (284)
Q Consensus        77 ~~~~vavK~~~~~--------------------------------~--~~----------------------------~-   93 (284)
                      +|+.||||++...                                +  +.                            . 
T Consensus        97 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  176 (377)
T 3byv_A           97 TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRF  176 (377)
T ss_dssp             CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEE
T ss_pred             CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEE
Confidence            7999999998521                                0  00                            0 


Q ss_pred             -----------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           94 -----------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        94 -----------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                                                   ..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       177 lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a  253 (377)
T 3byv_A          177 FLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHL  253 (377)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             EEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEechhh
Confidence                                         224468999999999999   899999999999999999999999999999


Q ss_pred             cccCCCCccccCCCCcccCccccccccccCC-----------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTG-----------DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      +......      ....| +.|+|||++.+.           .++.++|||||||++|||++|..||.......      
T Consensus       254 ~~~~~~~------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~------  320 (377)
T 3byv_A          254 VRDGARV------VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALG------  320 (377)
T ss_dssp             EETTCEE------ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------C------
T ss_pred             eecCCcc------cCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccccc------
Confidence            8643311      12567 999999999877           79999999999999999999999986432100      


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 ....+.. ..           ...+..+.+|+.+||+.||++|||+.|+++
T Consensus       321 -----------~~~~~~~-~~-----------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          321 -----------GSEWIFR-SC-----------KNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             -----------CSGGGGS-SC-----------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             -----------chhhhhh-hc-----------cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence                       0111110 00           011234789999999999999999999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.2e-37  Score=269.72  Aligned_cols=189  Identities=23%  Similarity=0.308  Sum_probs=146.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4477778999999999999997  8899999998643                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ...+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.......  
T Consensus       134 e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~--  208 (348)
T 1u5q_A          134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN--  208 (348)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC--
T ss_pred             ecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC--
Confidence             111               1456789999999999999   8999999999999999999999999999997664321  


Q ss_pred             ccCCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                           ...||+.|+|||++.   ...++.++|||||||++|||++|..||....        ............ .....
T Consensus       209 -----~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~--------~~~~~~~~~~~~-~~~~~  274 (348)
T 1u5q_A          209 -----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNE-SPALQ  274 (348)
T ss_dssp             -----CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSC-CCCCC
T ss_pred             -----cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcC-CCCCC
Confidence                 257899999999874   5678999999999999999999999986432        111122221111 11110


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .              ...+..+.+++.+||+.||++|||+.++++.
T Consensus       275 ~--------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          275 S--------------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             C--------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             C--------------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            0              1112347899999999999999999999753

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.8e-38  Score=279.75  Aligned_cols=142  Identities=18%  Similarity=0.169  Sum_probs=111.1

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccc--
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR--  172 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~--  172 (284)
                      .++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....      .....| +.|+|||++  
T Consensus       212 ~~~~i~~qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~  281 (413)
T 3dzo_A          212 ARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAE  281 (413)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhc
Confidence            45678899999999999   999999999999999999999999999998765433      112567 999999998  


Q ss_pred             --------cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChh
Q 039895          173 --------TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPE  244 (284)
Q Consensus       173 --------~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
                              ....++.++|||||||++|||++|+.||.....                 ......+    +....      
T Consensus       282 ~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~-----------------~~~~~~~----~~~~~------  334 (413)
T 3dzo_A          282 RMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA-----------------LGGSEWI----FRSCK------  334 (413)
T ss_dssp             HTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG-----------------GSCSGGG----GSSCC------
T ss_pred             cccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch-----------------hhhHHHH----Hhhcc------
Confidence                    555688999999999999999999999864321                 0001111    11110      


Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          245 KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       245 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        ..+..+.+|+.+||+.||++|||+.++++
T Consensus       335 --~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          335 --NIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             --CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence              11234889999999999999999888754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.7e-37  Score=277.42  Aligned_cols=190  Identities=21%  Similarity=0.279  Sum_probs=148.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||||++...                                          
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            36788889999999999999998  7899999998632                                          


Q ss_pred             --CCC---------------chhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF---------------SVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~---------------~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|.               ......++.||+.||.|||   + .+|+||||||+|||++.++.+||+|||+++......
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence              111               1456679999999999999   7 899999999999999999999999999997643322


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-cccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-SFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  230 (284)
                      ..   .....||+.|+|||++.+..++.++|||||||++|||++|..||....        ............ .++   
T Consensus       304 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~~~~p---  369 (446)
T 4ejn_A          304 AT---MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEEIRFP---  369 (446)
T ss_dssp             ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC---
T ss_pred             cc---cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHHhCCCCCC---
Confidence            21   122679999999999999999999999999999999999999996532        111222111111 111   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                                     ......+.+|+.+||+.||++||     |+.|+++
T Consensus       370 ---------------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          370 ---------------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             ---------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ---------------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                           11223478999999999999999     9999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=6.7e-38  Score=264.12  Aligned_cols=202  Identities=23%  Similarity=0.324  Sum_probs=157.5

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------C
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------F   90 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~   90 (284)
                      ..++|...+.||+|+||+||+|.+  ++..||+|++...                                        +
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            456778888999999999999999  5889999998754                                        1


Q ss_pred             CC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           91 PF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        91 ~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      |.                 ...++.++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++.........
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  167 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  167 (288)
T ss_dssp             CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred             CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence            11                 1456789999999999999   899999999999999999999999999999877544332


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ...  ...+|+.|+|||++.+..++.++||||||+++|+|++ |..||....     .......+..    ....     
T Consensus       168 ~~~--~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----~~~~~~~~~~----~~~~-----  231 (288)
T 3kfa_A          168 AHA--GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK----DYRM-----  231 (288)
T ss_dssp             EET--TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHT----TCCC-----
T ss_pred             ccc--CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhc----cCCC-----
Confidence            222  2567889999999998899999999999999999999 888876432     1112221111    0000     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                +.+...+..+.+++.+||+.||++|||+.++++.|+.+.++
T Consensus       232 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          232 ----------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence                      00112234488999999999999999999999999998753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.8e-38  Score=270.45  Aligned_cols=209  Identities=21%  Similarity=0.250  Sum_probs=154.7

Q ss_pred             CCCCCeeeecCCceEEEEEe------CCcceEEEeecCC-----------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~-----------------------------------------   89 (284)
                      |...+.||+|+||+||++.+      +++.||||++...                                         
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            37778999999999988865      6788999998754                                         


Q ss_pred             ---CCC--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 ---FPF--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ---~~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                         +|.              ...++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++........
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred             EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence               111              1567789999999999999   89999999999999999999999999999988765543


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC------CCccccHHHHHHHHhhcCcc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFD------DGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~  226 (284)
                      .........||+.|+|||++.+..++.++|||||||++|+|++|..||......      ................... 
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  268 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE-  268 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC-
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc-
Confidence            323333356888999999999888999999999999999999999998532100      0000000000001111100 


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                              .      .+.+..++..+.+|+.+||+.||++|||+.|+++.|+.+.+.
T Consensus       269 --------~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          269 --------R------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             --------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------C------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence                    0      011122334588999999999999999999999999998753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.2e-37  Score=288.99  Aligned_cols=195  Identities=22%  Similarity=0.294  Sum_probs=146.7

Q ss_pred             CeeeecCCceEEEEEe----CCcceEEEeecCC------------------------------------------CCC--
Q 039895           61 KVIMKCLFYKLYKGFL----QDRPISVMKFEDT------------------------------------------FPF--   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~------------------------------------------~~~--   92 (284)
                      +.||+|+||.||+|.+    .+..||||++...                                          +|.  
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            3699999999999976    4578999998753                                          111  


Q ss_pred             -------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           93 -------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        93 -------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                   ...++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+............
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence                         1456789999999999999   899999999999999999999999999999877654432222223


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ..+|+.|+|||++.+..++.++|||||||++|||++ |..||....        ..... .....+....          
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--------~~~~~-~~i~~~~~~~----------  592 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--------GSEVT-AMLEKGERMG----------  592 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHH-HHHHTTCCCC----------
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH-HHHHcCCCCC----------
Confidence            457889999999998899999999999999999998 999986533        11111 1111111110          


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                           .+..++..+.+|+..||+.||++|||+.+|++.|+++..
T Consensus       593 -----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          593 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence                 011233458899999999999999999999999999874

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=268.86  Aligned_cols=196  Identities=22%  Similarity=0.302  Sum_probs=141.2

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------CC
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------FP   91 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------~~   91 (284)
                      ..+.|...+.||+|+||.||+|..  +++.||||++...                                       +|
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            456688889999999999999999  6788999998654                                       11


Q ss_pred             ---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceeeccccccccCCCCcc
Q 039895           92 ---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                     .......++.||+.||.|||   +.+|+||||||+|||++.   ++.+||+|||+++........
T Consensus       131 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~  207 (349)
T 2w4o_A          131 TGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM  207 (349)
T ss_dssp             CSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence                           11567789999999999999   899999999999999975   889999999999876443221


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....||+.|+|||++.+..++.++|||||||++|||++|..||....    .   ......... ..... ...  
T Consensus       208 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~---~~~~~~~i~-~~~~~-~~~--  272 (349)
T 2w4o_A          208 ----KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER----G---DQFMFRRIL-NCEYY-FIS--  272 (349)
T ss_dssp             ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT----C---HHHHHHHHH-TTCCC-CCT--
T ss_pred             ----ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc----c---cHHHHHHHH-hCCCc-cCC--
Confidence                12578999999999999899999999999999999999999986432    1   111111111 11110 000  


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               +.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       273 ---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          273 ---------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             ---------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                     001122334789999999999999999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=278.46  Aligned_cols=205  Identities=20%  Similarity=0.246  Sum_probs=153.0

Q ss_pred             ecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------
Q 039895           45 FSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------   89 (284)
Q Consensus        45 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------   89 (284)
                      +.+.++....++|...+.||+|+||.||++..  +|+.||+|++...                                 
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            34555556678999999999999999999998  7899999998642                                 


Q ss_pred             -----------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccc
Q 039895           90 -----------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFT  142 (284)
Q Consensus        90 -----------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg  142 (284)
                                 +|..                .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence                       1211                445678999999999999   9999999999999999999999999999


Q ss_pred             cccccCCCCccccCCCCcccCcccccccccc-------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHH
Q 039895          143 LSLSIPEGETHINDSNRVIGTFGFMAPEYRT-------TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       143 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~  215 (284)
                      +++..........  ....||+.|+|||++.       ...++.++|||||||++|||++|..||....     ......
T Consensus       208 la~~~~~~~~~~~--~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~  280 (412)
T 2vd5_A          208 SCLKLRADGTVRS--LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-----TAETYG  280 (412)
T ss_dssp             TCEECCTTSCEEC--SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHH
T ss_pred             hheeccCCCcccc--ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-----HHHHHH
Confidence            9987755433221  2267999999999987       4568999999999999999999999997532     111111


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCC---CCHHHHHH
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR---PTIVQVAK  275 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---ps~~ev~~  275 (284)
                      .+........++..               ....+..+.+|+.+||. +|.+|   |++.|+++
T Consensus       281 ~i~~~~~~~~~p~~---------------~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          281 KIVHYKEHLSLPLV---------------DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             HHHTHHHHCCCC-------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             HHHhcccCcCCCcc---------------ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            11110000011100               11123347899999999 99998   58988864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=4.7e-38  Score=272.70  Aligned_cols=193  Identities=22%  Similarity=0.313  Sum_probs=147.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|..  +|+.||||++...                                           
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            5688889999999999999998  7899999987421                                           


Q ss_pred             ---CCC-------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc---ceeeccccc
Q 039895           90 ---FPF-------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLS  144 (284)
Q Consensus        90 ---~~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~Dfg~a  144 (284)
                         +|.                   +.....++.||+.||.|||   +.+|+||||||+|||++.++.   +||+|||++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence               221                   1345678999999999999   999999999999999987654   999999999


Q ss_pred             cccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE  224 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
                      ..........   ....||+.|+|||++.+..++.++|||||||++|+|++|..||....         ......... +
T Consensus       181 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~-~  247 (351)
T 3c0i_A          181 IQLGESGLVA---GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIK-G  247 (351)
T ss_dssp             EECCTTSCBC---CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHH-T
T ss_pred             eEecCCCeee---cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHc-C
Confidence            8775533221   22579999999999999899999999999999999999999996421         111111111 1


Q ss_pred             cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....  .+          ......+..+.+|+.+||+.||++|||+.|+++
T Consensus       248 ~~~~--~~----------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          248 KYKM--NP----------RQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             CCCC--CH----------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCC--Cc----------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1000  00          001122345789999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-37  Score=260.45  Aligned_cols=201  Identities=23%  Similarity=0.322  Sum_probs=151.3

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCc---ceEEEeecCC------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDR---PISVMKFEDT------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~---~vavK~~~~~------------------------------------------   89 (284)
                      |...++||+|+||+||+|.+  ++.   .||+|++...                                          
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            44457899999999999997  333   6999998653                                          


Q ss_pred             -CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       ++                .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++........
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence             11                00456789999999999999   89999999999999999999999999999986654322


Q ss_pred             c-ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 H-INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      . ........+|+.|+|||.+.+..++.++|||||||++|+|++|..|+....    ........+..    ....    
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~----~~~~~~~~~~~----~~~~----  247 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI----DPFDLTHFLAQ----GRRL----  247 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS----CGGGHHHHHHT----TCCC----
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC----CHHHHHHHhhc----CCCC----
Confidence            1 112223567899999999999999999999999999999999777665322    12222222111    1000    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                 +.+...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       248 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          248 -----------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                       00111223488999999999999999999999999998754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=7.1e-38  Score=270.35  Aligned_cols=205  Identities=20%  Similarity=0.324  Sum_probs=155.6

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEeCC-------cceEEEeecCC----------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFLQD-------RPISVMKFEDT----------------------------------   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~-------~~vavK~~~~~----------------------------------   89 (284)
                      ....++|...+.||+|+||.||+|.+.+       ..||||++...                                  
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            3345788889999999999999999843       78999998754                                  


Q ss_pred             --------CCCc---------------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecc
Q 039895           90 --------FPFS---------------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRD  122 (284)
Q Consensus        90 --------~~~~---------------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrD  122 (284)
                              +|..                                       ..++.++.||+.||.|||   +.+|+|||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~D  199 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRD  199 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence                    1111                                       234569999999999999   99999999


Q ss_pred             cccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 039895          123 IKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISY  201 (284)
Q Consensus       123 lkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~  201 (284)
                      |||+|||++.++.+||+|||++.......... ......||+.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  278 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYK-ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  278 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCcccc-ccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence            99999999999999999999997764332211 1122567899999999988899999999999999999999 888886


Q ss_pred             CCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          202 SSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      ...        ....... ...+.....               +..++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       279 ~~~--------~~~~~~~-~~~~~~~~~---------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          279 GMA--------HEEVIYY-VRDGNILAC---------------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             TSC--------HHHHHHH-HHTTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCC--------hHHHHHH-HhCCCcCCC---------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            432        1111111 111111110               1122334889999999999999999999999999986


Q ss_pred             hc
Q 039895          282 QS  283 (284)
Q Consensus       282 ~~  283 (284)
                      +.
T Consensus       335 ~~  336 (343)
T 1luf_A          335 ER  336 (343)
T ss_dssp             C-
T ss_pred             hh
Confidence            53

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1e-37  Score=262.53  Aligned_cols=194  Identities=21%  Similarity=0.311  Sum_probs=149.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|..||+|++...                                          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46788889999999999999998  7899999998643                                          


Q ss_pred             -CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc---ceeeccccccccCCC
Q 039895           90 -FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~Dfg~a~~~~~~  150 (284)
                       +|               .......++.|++.||.|||   +.+|+||||||+||+++.++.   +||+|||++......
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence             11               11556789999999999999   899999999999999986655   999999999776543


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ...    ....||+.|+|||++.+..++.++||||||+++|+|++|..||....     .   ........ .+.... .
T Consensus       162 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~---~~~~~~~~-~~~~~~-~  227 (284)
T 3kk8_A          162 EAW----HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----Q---HRLYAQIK-AGAYDY-P  227 (284)
T ss_dssp             CBC----CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHHHH-HTCCCC-C
T ss_pred             ccc----cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-----h---hHHHHHHH-hccccC-C
Confidence            322    12578999999999999999999999999999999999999986432     1   11111111 111100 0


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .           +.....+..+.+++.+||+.||++|||+.|+++
T Consensus       228 ~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          228 S-----------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             T-----------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             c-----------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            0           001122344789999999999999999999986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=7.4e-38  Score=270.62  Aligned_cols=195  Identities=18%  Similarity=0.192  Sum_probs=141.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDTF-------------------------------------------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------------------------------------------   90 (284)
                      +.|...+.||+|+||.||++.. +++.||||++....                                           
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~   88 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM   88 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence            4577788999999999999998 88899999986430                                           


Q ss_pred             ----------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 ----------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ----------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                      .....+..++.||+.||.|||   +.+|+||||||+|||++ ++.+||+|||+++.........
T Consensus        89 e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  164 (343)
T 3dbq_A           89 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  164 (343)
T ss_dssp             CCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence                            011467789999999999999   89999999999999997 6789999999998775433221


Q ss_pred             cCCCCcccCccccccccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-----------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN  223 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (284)
                      . .....||+.|+|||++.+           ..++.++|||||||++|||++|..||....      . ...........
T Consensus       165 ~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~-~~~~~~~~~~~  236 (343)
T 3dbq_A          165 V-KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------N-QISKLHAIIDP  236 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------S-HHHHHHHHHCT
T ss_pred             c-CCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh------h-HHHHHHHHhcC
Confidence            1 122579999999999854           678899999999999999999999986432      1 11111111111


Q ss_pred             CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ..         ....      +......+.+|+.+||+.||++|||+.|+++.
T Consensus       237 ~~---------~~~~------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          237 NH---------EIEF------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             TS---------CCCC------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             Cc---------ccCC------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            10         0000      00112347899999999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=8.4e-38  Score=266.84  Aligned_cols=212  Identities=21%  Similarity=0.320  Sum_probs=161.1

Q ss_pred             ecHHHHHHHhcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC----------------------------
Q 039895           45 FSADELKTATDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT----------------------------   89 (284)
Q Consensus        45 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~----------------------------   89 (284)
                      +...++....++|...+.||+|+||.||+|.+       +++.||||++...                            
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            34455555668899999999999999999984       4578999998654                            


Q ss_pred             ----------------CC-------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecc
Q 039895           90 ----------------FP-------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRD  122 (284)
Q Consensus        90 ----------------~~-------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrD  122 (284)
                                      +|                               ....+..++.|++.||.|||   +.+|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence                            11                               11346679999999999999   89999999


Q ss_pred             cccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 039895          123 IKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISY  201 (284)
Q Consensus       123 lkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~  201 (284)
                      |||+|||++.++.+||+|||++........... .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~  252 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  252 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEE-ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             CccceEEECCCCCEEECCCccccccccCcccee-ccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence            999999999999999999999987654332211 122567899999999988899999999999999999998 888886


Q ss_pred             CCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          202 SSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      ....    .......    ...+.....               +......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus       253 ~~~~----~~~~~~~----~~~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          253 GVKI----DEEFCRR----LKEGTRMRA---------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             TCCC----SHHHHHH----HHHTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccch----hHHHHHH----hccCccCCC---------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            4321    1111111    111110000               0112234789999999999999999999999999998


Q ss_pred             hc
Q 039895          282 QS  283 (284)
Q Consensus       282 ~~  283 (284)
                      ++
T Consensus       310 ~~  311 (316)
T 2xir_A          310 QA  311 (316)
T ss_dssp             HH
T ss_pred             hh
Confidence            75

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=8.3e-38  Score=273.10  Aligned_cols=196  Identities=10%  Similarity=0.023  Sum_probs=146.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------CCC----------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------FPF----------------   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------~~~----------------   92 (284)
                      ..|...+.||+|+||.||+|.+  +|+.||||++...                        .+.                
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            3477788999999999999998  7899999998752                        000                


Q ss_pred             -------------------c--------------------------hhH------HHHHHHHHHHHHHhccCCCCCeeec
Q 039895           93 -------------------S--------------------------VSK------LKIAIEIASAVAYLHVGFSRPVVSR  121 (284)
Q Consensus        93 -------------------~--------------------------~~~------~~i~~~i~~gL~~LH~~~~~~ivHr  121 (284)
                                         .                          ..+      +.++.||+.||+|||   +.+|+||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHr  218 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHG  218 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccC
Confidence                               0                          223      567799999999999   9999999


Q ss_pred             ccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC--CCCCcchhHHHHHHHHHHHHhCCCC
Q 039895          122 DIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKKI  199 (284)
Q Consensus       122 Dlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~G~il~elltg~~p  199 (284)
                      ||||+|||++.++.+||+|||+++.......      ...+|+.|+|||++.+  ..++.++|||||||++|||++|..|
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P  292 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGP------ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP  292 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTCEEE------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCCCcc------CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999987643221      1457799999999987  6799999999999999999999999


Q ss_pred             CCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          200 SYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      |.........               .+.... ..........++.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       293 f~~~~~~~~~---------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          293 FGLVTPGIKG---------------SWKRPS-LRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             TTBCCTTCTT---------------CCCBCC-TTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCcCccccc---------------chhhhh-hhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            9754311100               000000 00000011111111233445889999999999999999999974

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-37  Score=263.48  Aligned_cols=203  Identities=17%  Similarity=0.247  Sum_probs=145.3

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|..  +++.||+|++...                                         
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            357899999999999999999998  7889999998643                                         


Q ss_pred             ---CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|.               ......++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++.......
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred             EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence               111               1456789999999999999   8999999999999999999999999999987765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc-ccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES-FKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  230 (284)
                      ....  ....||+.|+|||++.+..++.++||||||+++|+|++|..||....         ............ .....
T Consensus       189 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~~~~~~~~~~~~~~~~~~  257 (309)
T 2h34_A          189 LTQL--GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---------LSVMGAHINQAIPRPSTV  257 (309)
T ss_dssp             ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---------HHHHHHHHHSCCCCGGGT
T ss_pred             cccc--cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---------HHHHHHHhccCCCCcccc
Confidence            2211  12568999999999998899999999999999999999999986422         111111111111 01111


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-TIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~ev~~~L~~l~~~  283 (284)
                      .              ...+..+.+++.+||+.||++|| |+.++++.|++++..
T Consensus       258 ~--------------~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          258 R--------------PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             S--------------TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             C--------------CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence            1              11223478999999999999999 999999999987643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.5e-37  Score=273.22  Aligned_cols=195  Identities=18%  Similarity=0.204  Sum_probs=142.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDTF-------------------------------------------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------------------------------------------   90 (284)
                      ..|...+.||+|+||.||+|.. .++.||||++....                                           
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            3488889999999999999998 78899999985430                                           


Q ss_pred             --C--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 --P--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 --~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                        +              ....+..++.||+.||.|||   +.+|+||||||+|||++ ++.+||+|||+++.+.......
T Consensus       136 E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          136 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             ECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred             ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence              0              00357789999999999999   99999999999999995 6889999999998775433221


Q ss_pred             cCCCCcccCccccccccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-----------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN  223 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (284)
                      . .....||+.|+|||++.+           ..++.++|||||||++|||++|..||....       ............
T Consensus       212 ~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-------~~~~~~~~~~~~  283 (390)
T 2zmd_A          212 V-KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLHAIIDP  283 (390)
T ss_dssp             ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHHHHHHHCT
T ss_pred             c-CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-------HHHHHHHHHhCc
Confidence            1 122579999999999865           368899999999999999999999996432       111111111111


Q ss_pred             CcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 ESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .         .....    +  ......+.+|+.+||+.||++|||+.|+++.
T Consensus       284 ~---------~~~~~----~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          284 N---------HEIEF----P--DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             T---------SCCCC----C--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             c---------ccCCC----C--ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            1         00000    0  0012347899999999999999999999853

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.8e-37  Score=264.21  Aligned_cols=211  Identities=17%  Similarity=0.217  Sum_probs=136.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||+|++...                                          
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46788899999999999999998  7899999998643                                          


Q ss_pred             CCC--------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 FPF--------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ~~~--------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                      +|.                    ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  160 (317)
T 2pmi_A           84 FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI  160 (317)
T ss_dssp             CCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred             ecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence            111                    1345678889999999999   89999999999999999999999999999987653


Q ss_pred             CCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---c
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---S  225 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~  225 (284)
                      ....   .....||+.|+|||++.+. .++.++|||||||++|||++|..||....     .......+.......   .
T Consensus       161 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~  232 (317)
T 2pmi_A          161 PVNT---FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN-----DEEQLKLIFDIMGTPNESL  232 (317)
T ss_dssp             CCCC---CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCTTT
T ss_pred             Cccc---CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCChhH
Confidence            3221   1125789999999998764 68999999999999999999999986432     111111111111110   0


Q ss_pred             ccccc-----cccccCCCCCCCh------hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIV-----DPAIVGEEGLMWP------EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~-----~~~~~~~~~~~~~------~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +....     .+.+.........      ........+.+|+.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            00000     0000000000000      00112345889999999999999999999975

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.7e-37  Score=272.86  Aligned_cols=212  Identities=14%  Similarity=0.168  Sum_probs=152.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|..  +++.||||++...                                           
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~  116 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN  116 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence            6788889999999999999988  7889999998653                                           


Q ss_pred             ---------CC----------------CchhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCC---------
Q 039895           90 ---------FP----------------FSVSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEEN---------  134 (284)
Q Consensus        90 ---------~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~---------  134 (284)
                               +|                .......++.||+.||.|||   ++ +|+||||||+|||++.++         
T Consensus       117 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~~  193 (397)
T 1wak_A          117 GTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAAE  193 (397)
T ss_dssp             EEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred             CceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence                     00                01456789999999999999   87 999999999999999775         


Q ss_pred             ----------------------------------------cceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895          135 ----------------------------------------VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus       135 ----------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                                                              .+||+|||++........      ...||+.|+|||++.+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~------~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT------EDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSC------SCCSCGGGCCHHHHHT
T ss_pred             hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCc------cCCCCCcccCChhhcC
Confidence                                                    799999999987653321      2578999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccHHHHHHHHhhc--------Cccc-cccccc--ccCCCC-C-
Q 039895          175 GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE-DYRLQDLVKKYIEN--------ESFK-EIVDPA--IVGEEG-L-  240 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~-~~~~~~--~~~~~~-~-  240 (284)
                      ..++.++|||||||++|||++|..||......... .......+......        .... ......  +..... . 
T Consensus       268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (397)
T 1wak_A          268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP  347 (397)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred             CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence            99999999999999999999999999754421111 01111111111100        0000 000000  000000 0 


Q ss_pred             ---------CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          241 ---------MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       241 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               .+.........+.+|+.+||+.||++|||+.|+++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                     01123456677899999999999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.9e-37  Score=267.46  Aligned_cols=187  Identities=17%  Similarity=0.238  Sum_probs=148.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..  +|+.||+|++...                                           
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            6788889999999999999998  7899999998532                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......  
T Consensus       121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~--  195 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--  195 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc--
Confidence             221               1456779999999999999   9999999999999999999999999999998765432  


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... +...      
T Consensus       196 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~-~~~~------  256 (350)
T 1rdq_E          196 ----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVS-GKVR------  256 (350)
T ss_dssp             ----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-CCCC------
T ss_pred             ----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHc-CCCC------
Confidence                12679999999999999999999999999999999999999996432        1122222211 1110      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                      +          +...+..+.+++.+||+.||++||+     +.||++
T Consensus       257 ~----------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          257 F----------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             C----------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             C----------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            0          0112234789999999999999998     788764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=7.8e-37  Score=267.96  Aligned_cols=144  Identities=19%  Similarity=0.275  Sum_probs=121.8

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||+||+|..  +++.||||++...                                         
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            457888889999999999999998  7889999998654                                         


Q ss_pred             -----CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe--cCCcceeeccccccc
Q 039895           90 -----FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ--EENVAQLFDFTLSLS  146 (284)
Q Consensus        90 -----~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~~~kl~Dfg~a~~  146 (284)
                           +|                .......++.|++.||.|||.. ..+|+||||||+|||++  .++.+||+|||++..
T Consensus       132 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             EEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence                 11                1145678999999999999932 47899999999999995  477899999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ......      ...||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus       211 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          211 LGQRIY------QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             TTCCCC------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccccc------cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            654322      257899999999999999999999999999999999999999753

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=3.7e-38  Score=272.72  Aligned_cols=210  Identities=20%  Similarity=0.178  Sum_probs=147.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+     .+..||+|++...                                        
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            4677888999999999999998     4578999987542                                        


Q ss_pred             ----------------CC--------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC--cce
Q 039895           90 ----------------FP--------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN--VAQ  137 (284)
Q Consensus        90 ----------------~~--------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~--~~k  137 (284)
                                      +|              ....++.++.||+.||.|||   +.+|+||||||+|||++.++  .+|
T Consensus       117 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~k  193 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVY  193 (345)
T ss_dssp             EEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSEE
T ss_pred             cccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcEE
Confidence                            11              11567889999999999999   89999999999999999887  999


Q ss_pred             eeccccccccCCCCccc----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          138 LFDFTLSLSIPEGETHI----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       138 l~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      |+|||+++.+.......    .......||+.|+|||++.+..++.++|||||||++|||++|..||....   ......
T Consensus       194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~---~~~~~~  270 (345)
T 2v62_A          194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL---KDPVAV  270 (345)
T ss_dssp             ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT---TCHHHH
T ss_pred             EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc---cccHHH
Confidence            99999998764322111    11123579999999999999899999999999999999999999995322   111111


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIY  281 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~  281 (284)
                      ........  ..++..+.....         ....+..+.+++..||+.||++|||+.+|++.|+++.
T Consensus       271 ~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          271 QTAKTNLL--DELPQSVLKWAP---------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHH--HTTTHHHHHHSC---------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHhhc--ccccHHHHhhcc---------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            11111111  111111100000         0022335889999999999999999999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.3e-37  Score=268.28  Aligned_cols=191  Identities=20%  Similarity=0.257  Sum_probs=147.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||+|++...                                          
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            46788899999999999999999  6789999998642                                          


Q ss_pred             ---CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus        99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence               1111               456779999999999999   8999999999999999999999999999997643222


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..   .....||+.|+|||++.+..++.++|||||||++|||++|..||....        ........... ...  + 
T Consensus       176 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~-~~~--~-  240 (353)
T 2i0e_A          176 VT---TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEH-NVA--Y-  240 (353)
T ss_dssp             CC---BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHC-CCC--C-
T ss_pred             cc---cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhC-CCC--C-
Confidence            11   123679999999999999999999999999999999999999996432        11222222111 100  0 


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                                   +...+..+.+|+.+||+.||++||+     +.++++
T Consensus       241 -------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          241 -------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             -------------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             -------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                         0112234789999999999999995     466654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.9e-37  Score=264.47  Aligned_cols=202  Identities=22%  Similarity=0.301  Sum_probs=155.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~-------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..       ++..||+|++...                                     
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            46677788999999999999986       3478999998653                                     


Q ss_pred             -----CCC---------------------------------------chhHHHHHHHHHHHHHHhccCCCCCeeeccccc
Q 039895           90 -----FPF---------------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKP  125 (284)
Q Consensus        90 -----~~~---------------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp  125 (284)
                           +|.                                       ...++.++.||+.||.|||   +.+|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence                 111                                       1245689999999999999   89999999999


Q ss_pred             CcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 039895          126 TTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSH  204 (284)
Q Consensus       126 ~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~  204 (284)
                      +|||++.++.+||+|||++........... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEEC-SSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             heEEEcCCCCEEEcccccccccccccccee-ccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999987654433221 222467889999999988889999999999999999999 998886432


Q ss_pred             CCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          205 FDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                           ...+...+.    ......               .+...+..+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       258 -----~~~~~~~~~----~~~~~~---------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          258 -----PERLFNLLK----TGHRME---------------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             -----GGGHHHHHH----TTCCCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -----HHHHHHHhh----cCCcCC---------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence                 112222111    111000               0112233488999999999999999999999999998764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.7e-37  Score=273.16  Aligned_cols=206  Identities=24%  Similarity=0.328  Sum_probs=147.2

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      .|...+.||+|+||.||+|.+  +|+.||||++...                                           +
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~  134 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  134 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence            477788999999999999999  7899999988643                                           1


Q ss_pred             CCc------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-CcceeeccccccccCCCC
Q 039895           91 PFS------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 ~~~------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~~~~~~~  151 (284)
                      +..                  .....++.||+.||.|||   +.+|+||||||+|||++.+ +.+||+|||+++.+....
T Consensus       135 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~  211 (420)
T 1j1b_A          135 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE  211 (420)
T ss_dssp             CCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             ccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC
Confidence            100                  235678999999999999   9999999999999999965 578999999998765432


Q ss_pred             ccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh--------
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE--------  222 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------  222 (284)
                      ..    ....||+.|+|||++.+. .++.++|||||||++|||++|+.||....    ....+...+.....        
T Consensus       212 ~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~----~~~~l~~i~~~lg~p~~~~~~~  283 (420)
T 1j1b_A          212 PN----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS----GVDQLVEIIKVLGTPTREQIRE  283 (420)
T ss_dssp             CC----CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCSCCHHHHHH
T ss_pred             Cc----eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCCHHHHHh
Confidence            21    125789999999998765 78999999999999999999999997532    11112222211100        


Q ss_pred             -cCcccccccccccCCCCCCChh--hHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 -NESFKEIVDPAIVGEEGLMWPE--KEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ...+.+...+.+..   ..|..  .......+.+|+.+||+.||++|||+.|+++
T Consensus       284 ~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          284 MNPNYTEFKFPQIKA---HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HCSCCCCCCCCCCCC---CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hChhhhhhccCccCC---CCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence             01111111111100   00100  1122345889999999999999999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-37  Score=269.58  Aligned_cols=204  Identities=20%  Similarity=0.259  Sum_probs=153.6

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|.+       ++..||||++...                                    
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            346788889999999999999996       3457999998643                                    


Q ss_pred             -------CC--------------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccc
Q 039895           90 -------FP--------------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIK  124 (284)
Q Consensus        90 -------~~--------------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlk  124 (284)
                             +|                                      ....++.++.||+.||.|||   +.+|+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence                   11                                      11235679999999999999   8999999999


Q ss_pred             cCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 039895          125 PTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSS  203 (284)
Q Consensus       125 p~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~  203 (284)
                      |+|||++.++.+||+|||++........... .....||+.|+|||++.+..++.++|||||||++|+|+| |..||...
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVV-RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEE-ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCcccee-ccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            9999999999999999999987654332211 122567889999999988899999999999999999998 99898653


Q ss_pred             CCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..    ......    .........               .+...+..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus       279 ~~----~~~~~~----~~~~~~~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          279 PV----DANFYK----LIQNGFKMD---------------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             CC----SHHHHH----HHHTTCCCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             Cc----HHHHHH----HHhcCCCCC---------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            31    111111    111110000               0111234488999999999999999999999999998753

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=274.11  Aligned_cols=218  Identities=14%  Similarity=0.190  Sum_probs=159.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            4577788999999999999999  6899999998643                                           


Q ss_pred             -CC------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE----ecCCcceeeccccccc
Q 039895           90 -FP------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL----QEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 -~~------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~Dfg~a~~  146 (284)
                       +|                  ....++.++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence             11                  11557789999999999999   9999999999999999    7777899999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccC--------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTT--------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      .......    ....||+.|+|||++..        ..++.++|||||||++|||++|..||.........    .....
T Consensus       166 ~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~----~~~~~  237 (396)
T 4eut_A          166 LEDDEQF----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN----KEVMY  237 (396)
T ss_dssp             CCCGGGS----SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC----HHHHH
T ss_pred             ccCCCcc----ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch----HHHHH
Confidence            6543322    12579999999998764        46788999999999999999999999754321111    12222


Q ss_pred             HHhhcCc---ccccc---ccc--ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          219 KYIENES---FKEIV---DPA--IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       219 ~~~~~~~---~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .......   +....   ...  ..................+.+++.+||+.||++|||+.|+++.++++++.
T Consensus       238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             HHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             HHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            2221111   11000   000  00011111123456677788999999999999999999999999998753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=3e-37  Score=265.44  Aligned_cols=200  Identities=19%  Similarity=0.218  Sum_probs=137.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      ..+|...+.||+|+||.||+|.+  +++.||||++...                                          
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            35678889999999999999998  8899999987433                                          


Q ss_pred             --------CC-----------------CchhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEecCCcceeeccc
Q 039895           90 --------FP-----------------FSVSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQEENVAQLFDFT  142 (284)
Q Consensus        90 --------~~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~~~~~~kl~Dfg  142 (284)
                              +|                 ....++.++.||+.||.|||   +.+  |+||||||+|||++.++.+||+|||
T Consensus       107 ~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  183 (337)
T 3ll6_A          107 AEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFG  183 (337)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred             ceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence                    00                 00456789999999999999   888  9999999999999999999999999


Q ss_pred             cccccCCCCccc---------cCCCCcccCccccccccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          143 LSLSIPEGETHI---------NDSNRVIGTFGFMAPEYR---TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       143 ~a~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      ++..........         .......||+.|+|||++   .+..++.++|||||||++|+|++|..||.....     
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----  258 (337)
T 3ll6_A          184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-----  258 (337)
T ss_dssp             TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred             cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH-----
Confidence            998775432211         011124689999999998   566789999999999999999999999864320     


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                         .....     .......              .......+.+|+.+||+.||++|||+.|+++.|+.+...
T Consensus       259 ---~~~~~-----~~~~~~~--------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          259 ---LRIVN-----GKYSIPP--------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             ---------------CCCCT--------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---HHhhc-----CcccCCc--------------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence               00000     0000000              001112267899999999999999999999999998753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.1e-38  Score=269.12  Aligned_cols=210  Identities=16%  Similarity=0.214  Sum_probs=144.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|...+.||+|+||+||+|..  +++.||+|++...                                          +
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            4577788999999999999999  7899999988643                                          1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.......... 
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-  157 (324)
T 3mtl_A           82 LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY-  157 (324)
T ss_dssp             CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc-
Confidence            11               1456778999999999999   9999999999999999999999999999997654332211 


Q ss_pred             CCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC---ccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE---SFKEIVD  231 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  231 (284)
                        ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||....     .......+.......   .+.....
T Consensus       158 --~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~  230 (324)
T 3mtl_A          158 --DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST-----VEEQLHFIFRILGTPTEETWPGILS  230 (324)
T ss_dssp             -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             --ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChHhchhhhc
Confidence              12568999999999876 568999999999999999999999986532     111222222211111   1111111


Q ss_pred             ccc------cCC-CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAI------VGE-EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~------~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...      ... ..............+.+|+.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            000      000 00000011122345789999999999999999999975

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=4.8e-37  Score=261.77  Aligned_cols=203  Identities=20%  Similarity=0.311  Sum_probs=155.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~-------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+       ++..||+|++...                                     
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            35677888999999999999985       4578999998643                                     


Q ss_pred             ------CC---------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE
Q 039895           90 ------FP---------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL  130 (284)
Q Consensus        90 ------~~---------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl  130 (284)
                            +|                                 .....+.++.||+.||.|||   +.+|+||||||+|||+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence                  11                                 11345679999999999999   8999999999999999


Q ss_pred             ecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCc
Q 039895          131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGE  209 (284)
Q Consensus       131 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~  209 (284)
                      +.++.+||+|||++........... .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.....    
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----  253 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVV-KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----  253 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEE-CSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS----
T ss_pred             cCCCCEEEcccccccccccccccee-ccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc----
Confidence            9999999999999987765433221 122567889999999988899999999999999999999 8888864321    


Q ss_pred             cccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          210 DYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .......+..    . .....              +...+..+.+++.+||+.||.+|||+.|+++.|+++.++
T Consensus       254 ~~~~~~~~~~----~-~~~~~--------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          254 DSKFYKMIKE----G-FRMLS--------------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             SHHHHHHHHH----T-CCCCC--------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhHHHHHhcc----C-CCCCC--------------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            1111111111    1 00000              111223478999999999999999999999999998864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.3e-37  Score=262.73  Aligned_cols=203  Identities=24%  Similarity=0.353  Sum_probs=144.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|..||+|++...                                          
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35688889999999999999998  7899999998642                                          


Q ss_pred             --CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 --FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 --~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                        +|                   .......++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++....
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence              11                   11356689999999999999   8999999999999999999999999999987664


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ......   ....|++.|+|||++.+..++.++||||||+++|+|++|..||....      .......... .......
T Consensus       188 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~-~~~~~~~  257 (310)
T 2wqm_A          188 SKTTAA---HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKI-EQCDYPP  257 (310)
T ss_dssp             --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHH-HTTCSCC
T ss_pred             CCCccc---cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc------hhHHHHHHHh-hcccCCC
Confidence            432211   12568999999999999899999999999999999999999986432      1222222221 1111111


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ...              ...+..+.+++.+||+.||++|||+.+|++.|+++...
T Consensus       258 ~~~--------------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          258 LPS--------------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             CCT--------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             Ccc--------------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            110              11223478999999999999999999999999998753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.8e-38  Score=270.68  Aligned_cols=206  Identities=17%  Similarity=0.227  Sum_probs=150.7

Q ss_pred             CcceecHHHHHHHhcCCCCC-CeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------
Q 039895           41 PIRSFSADELKTATDDFDGG-KVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------   89 (284)
Q Consensus        41 ~~~~~~~~~l~~~~~~f~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------   89 (284)
                      ....+.+.......+.|... +.||+|+||.||+|..  +++.||+|++...                            
T Consensus        14 ~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~   93 (327)
T 3lm5_A           14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN   93 (327)
T ss_dssp             --CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             cchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEE
Confidence            33344444455555556655 7899999999999998  6899999998653                            


Q ss_pred             ----------------CC-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---C
Q 039895           90 ----------------FP-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---E  133 (284)
Q Consensus        90 ----------------~~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~  133 (284)
                                      +|                 ....+..++.|++.||.|||   +.+|+||||||+|||++.   +
T Consensus        94 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~  170 (327)
T 3lm5_A           94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPL  170 (327)
T ss_dssp             EEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTB
T ss_pred             EEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCC
Confidence                            11                 11567889999999999999   899999999999999997   7


Q ss_pred             CcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          134 NVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       134 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      +.+||+|||++.........    ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        .
T Consensus       171 ~~~kL~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~  238 (327)
T 3lm5_A          171 GDIKIVDFGMSRKIGHACEL----REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED--------N  238 (327)
T ss_dssp             CCEEECCGGGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------H
T ss_pred             CcEEEeeCccccccCCcccc----ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------c
Confidence            89999999999876543221    12578999999999999999999999999999999999999986532        1


Q ss_pred             HHHHHHHhh-cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          214 QDLVKKYIE-NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       214 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ......... ......              +........+.+++.+||+.||++|||+.|+++
T Consensus       239 ~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          239 QETYLNISQVNVDYSE--------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHHHHHHTCCCCCT--------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hHHHHHHHhcccccCc--------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            111111111 000000              001122344789999999999999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.4e-37  Score=265.06  Aligned_cols=217  Identities=18%  Similarity=0.177  Sum_probs=146.9

Q ss_pred             HHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------
Q 039895           50 LKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        50 l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------   89 (284)
                      +....+.|...+.||+|+||.||+|..  +|+.||||++...                                      
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (346)
T 1ua2_A            5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK   84 (346)
T ss_dssp             --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence            344557899999999999999999999  6899999998632                                      


Q ss_pred             --------CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 --------FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 --------~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                              +|               .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        85 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A           85 SNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS  161 (346)
T ss_dssp             TCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred             CceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence                    11               11567789999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc--
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN--  223 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--  223 (284)
                      .......   .....||+.|+|||++.+. .++.++|||||||++|||++|.+||....    ....+..........  
T Consensus       162 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~----~~~~~~~i~~~~~~~~~  234 (346)
T 1ua2_A          162 FGSPNRA---YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS----DLDQLTRIFETLGTPTE  234 (346)
T ss_dssp             TTSCCCC---CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCT
T ss_pred             ccCCccc---CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC----HHHHHHHHHHHcCCCCh
Confidence            6543221   1225789999999998764 58899999999999999999998886432    111111111111100  


Q ss_pred             Ccccccccc-c-ccCCCCCCCh---hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 ESFKEIVDP-A-IVGEEGLMWP---EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ~~~~~~~~~-~-~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ..+...... . .........+   ........+.+|+.+||+.||++|||+.|+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            111111000 0 0000000000   011223558899999999999999999999863

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.4e-37  Score=269.04  Aligned_cols=189  Identities=26%  Similarity=0.307  Sum_probs=146.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  ++..||+|++...                                          
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            36788889999999999999999  7889999998543                                          


Q ss_pred             ---CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus       117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence               111               0445678999999999999   9999999999999999999999999999997643322


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      .   ......||+.|+|||++.+..++.++|||||||++|||++|..||....        ........... ...  +.
T Consensus       194 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~-~~~--~~  259 (373)
T 2r5t_A          194 S---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNK-PLQ--LK  259 (373)
T ss_dssp             C---CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHHHHS-CCC--CC
T ss_pred             C---ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhc-ccC--CC
Confidence            1   1223679999999999999999999999999999999999999996432        12222222111 100  00


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV  273 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  273 (284)
                      +              .....+.+|+.+||+.||.+||++.+.
T Consensus       260 ~--------------~~~~~~~~li~~lL~~dp~~R~~~~~~  287 (373)
T 2r5t_A          260 P--------------NITNSARHLLEGLLQKDRTKRLGAKDD  287 (373)
T ss_dssp             S--------------SSCHHHHHHHHHHTCSSGGGSTTTTTT
T ss_pred             C--------------CCCHHHHHHHHHHcccCHHhCCCCCCC
Confidence            0              112347899999999999999998543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=5.2e-37  Score=275.20  Aligned_cols=139  Identities=20%  Similarity=0.332  Sum_probs=104.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------CC-----------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------FP-----------   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------~~-----------   91 (284)
                      +.|...+.||+|+||+||+|.+  +++.||||++...                              ++           
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            6788899999999999999988  7899999998653                              00           


Q ss_pred             ---------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           92 ---------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        92 ---------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                                           .+.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus       133 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  209 (458)
T 3rp9_A          133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP  209 (458)
T ss_dssp             EEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred             EEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence                                 11456789999999999999   999999999999999999999999999999876432


Q ss_pred             Cccc------------------------cCCCCcccCccccccccc-cCCCCCcchhHHHHHHHHHHHHhC
Q 039895          151 ETHI------------------------NDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTG  196 (284)
Q Consensus       151 ~~~~------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~G~il~elltg  196 (284)
                      ....                        ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            2110                        112235789999999976 456799999999999999999994

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=6.9e-37  Score=256.93  Aligned_cols=189  Identities=24%  Similarity=0.357  Sum_probs=145.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||+||+|..  ++..||+|++...                                          
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            46788889999999999999998  6778999988432                                          


Q ss_pred             --CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        +|.               ......++.|++.||.|||   +.+|+|+||||+|||++.++.++|+|||++........
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~  164 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR  164 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence              111               1456789999999999999   99999999999999999999999999999866543322


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (284)
                           ....||+.|+|||++.+..++.++||||||+++|+|++|..||....        ........... ..++    
T Consensus       165 -----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~~----  227 (279)
T 3fdn_A          165 -----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVEFTFP----  227 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCCC----
T ss_pred             -----cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHHhCCCCCC----
Confidence                 12578999999999999899999999999999999999999986432        11111111110 0111    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                    ......+.+|+.+||+.||++|||+.|+++.
T Consensus       228 --------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          228 --------------DFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             --------------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             --------------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                          1122347899999999999999999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.4e-37  Score=285.16  Aligned_cols=194  Identities=19%  Similarity=0.260  Sum_probs=145.4

Q ss_pred             eeeecCCceEEEEEe----CCcceEEEeecCC-----------------------------------------CCC----
Q 039895           62 VIMKCLFYKLYKGFL----QDRPISVMKFEDT-----------------------------------------FPF----   92 (284)
Q Consensus        62 ~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-----------------------------------------~~~----   92 (284)
                      .||+|+||.||+|.+    ++..||||++...                                         +|.    
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence            699999999999987    3457999998753                                         111    


Q ss_pred             ------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCc
Q 039895           93 ------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRV  160 (284)
Q Consensus        93 ------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  160 (284)
                                  ...++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.............
T Consensus       423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  499 (613)
T 2ozo_A          423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  499 (613)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence                        1567789999999999999   8999999999999999999999999999998775433222222223


Q ss_pred             ccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCC
Q 039895          161 IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEG  239 (284)
Q Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
                      .+|+.|+|||++.+..++.++|||||||++|||++ |..||....     .......    +..+...            
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~~~~~~----i~~~~~~------------  558 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GPEVMAF----IEQGKRM------------  558 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----SHHHHHH----HHTTCCC------------
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHH----HHcCCCC------------
Confidence            46789999999998899999999999999999998 999986532     1111111    1111100            


Q ss_pred             CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          240 LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                         +.+..++..+.+|+..||+.+|++|||+.+|++.|+.+..
T Consensus       559 ---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          559 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             ---CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence               0112233458899999999999999999999999999864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.5e-37  Score=270.76  Aligned_cols=222  Identities=16%  Similarity=0.203  Sum_probs=154.9

Q ss_pred             cHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------
Q 039895           46 SADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------   89 (284)
Q Consensus        46 ~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------   89 (284)
                      ...++....+.|...+.||+|+||.||+|..  ++..||||++...                                  
T Consensus        18 ~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   97 (364)
T 3qyz_A           18 VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP   97 (364)
T ss_dssp             CC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCS
T ss_pred             EccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecC
Confidence            3333334456788889999999999999998  7889999998643                                  


Q ss_pred             -------------CC-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccc
Q 039895           90 -------------FP-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL  143 (284)
Q Consensus        90 -------------~~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~  143 (284)
                                   ++             .......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        98 ~~~~~~~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  174 (364)
T 3qyz_A           98 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGL  174 (364)
T ss_dssp             STTTCCCEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CccccceEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcc
Confidence                         00             01456789999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      +.................||+.|+|||++.+ ..++.++|||||||++|+|++|..||....     .......+.....
T Consensus       175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~  249 (364)
T 3qyz_A          175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH-----YLDQLNHILGILG  249 (364)
T ss_dssp             CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS-----GGGHHHHHHHHHC
T ss_pred             eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHHHhC
Confidence            9876544332222233679999999998654 458999999999999999999999986532     1222222221111


Q ss_pred             cCccc---cccc-------ccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 NESFK---EIVD-------PAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~~~~~---~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .....   ...+       ..+.......+. ........+.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             SCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            11000   0000       000000000000 01122345789999999999999999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.9e-37  Score=267.65  Aligned_cols=198  Identities=14%  Similarity=0.160  Sum_probs=150.8

Q ss_pred             HhcCCCCCCeeeecCCceEEEEE-----e--CCcceEEEeecCC------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGF-----L--QDRPISVMKFEDT------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~-----~--~~~~vavK~~~~~------------------------------------   89 (284)
                      ..+.|...+.||+|+||+||+|.     .  .++.||||++...                                    
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~  142 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS  142 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence            34567777889999999999993     2  7899999998754                                    


Q ss_pred             -----CCCc--------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-----------C
Q 039895           90 -----FPFS--------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-----------E  133 (284)
Q Consensus        90 -----~~~~--------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-----------~  133 (284)
                           +|..                    ..++.++.||+.||.|||   +.+|+||||||+|||++.           +
T Consensus       143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------C
T ss_pred             EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccccc
Confidence                 2211                    347789999999999999   999999999999999998           8


Q ss_pred             CcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccH
Q 039895          134 NVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL  213 (284)
Q Consensus       134 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~  213 (284)
                      +.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....        
T Consensus       220 ~~~kl~DFG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------  290 (365)
T 3e7e_A          220 AGLALIDLGQSIDMKLFPKGT-IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG--------  290 (365)
T ss_dssp             TTEEECCCTTCEEGGGSCTTE-EECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET--------
T ss_pred             CCEEEeeCchhhhhhccCCCc-eeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC--------
Confidence            999999999997653221111 11225799999999999999999999999999999999999999853220        


Q ss_pred             HHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCC-CCHHHHHHHHHHHHhc
Q 039895          214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR-PTIVQVAKQLRQIYQS  283 (284)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R-ps~~ev~~~L~~l~~~  283 (284)
                                +.  ......+..     .+    ....+.+++..|++.+|.+| |++.++.+.|+++++.
T Consensus       291 ----------~~--~~~~~~~~~-----~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          291 ----------GE--CKPEGLFRR-----LP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             ----------TE--EEECSCCTT-----CS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----------Cc--eeechhccc-----cC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence                      00  000000000     01    12236689999999999998 5888899999888754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=4.3e-38  Score=271.90  Aligned_cols=199  Identities=21%  Similarity=0.260  Sum_probs=149.3

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------CCC
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------FPF   92 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------~~~   92 (284)
                      ..++|...+.||+|+||.||+|..  +|+.||+|++...                                      +|.
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   99 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK   99 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence            346788889999999999999999  7889999998654                                      221


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC----CcceeeccccccccCCCCcc
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE----NVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~----~~~kl~Dfg~a~~~~~~~~~  153 (284)
                                     +.....++.||+.||.|||   +.+|+||||||+|||+...    +.+||+|||++.........
T Consensus       100 gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~  176 (342)
T 2qr7_A          100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL  176 (342)
T ss_dssp             SCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence                           1556789999999999999   9999999999999998533    35999999999876543322


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .   ....||+.|+|||++.+..++.++|||||||++|||++|..||....  .   ........... .+.+...    
T Consensus       177 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~---~~~~~~~~~i~-~~~~~~~----  243 (342)
T 2qr7_A          177 L---MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--D---DTPEEILARIG-SGKFSLS----  243 (342)
T ss_dssp             B---CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST--T---SCHHHHHHHHH-HCCCCCC----
T ss_pred             e---eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC--c---CCHHHHHHHHc-cCCcccC----
Confidence            1   22578999999999988788999999999999999999999996432  1   11222222211 1111100    


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        .      ......+..+.+|+.+||+.||++|||+.|+++
T Consensus       244 --~------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          244 --G------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             --S------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             --c------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              0      001122334789999999999999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.6e-37  Score=261.96  Aligned_cols=194  Identities=18%  Similarity=0.315  Sum_probs=146.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CC-------cceEEEeecCC------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QD-------RPISVMKFEDT------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~-------~~vavK~~~~~------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  ++       ..||+|++...                                    
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            5677788999999999999998  34       46999998543                                    


Q ss_pred             -----CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc--------ceeec
Q 039895           90 -----FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV--------AQLFD  140 (284)
Q Consensus        90 -----~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~D  140 (284)
                           +|.                ...+..++.||+.||.|||   +.+|+||||||+|||++.++.        +||+|
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence                 111                1456789999999999999   999999999999999998887        99999


Q ss_pred             cccccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHH
Q 039895          141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKK  219 (284)
Q Consensus       141 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~  219 (284)
                      ||++........       ..||+.|+|||++.+ ..++.++|||||||++|||++|..|+....       ........
T Consensus       165 fg~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-------~~~~~~~~  230 (289)
T 4fvq_A          165 PGISITVLPKDI-------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-------DSQRKLQF  230 (289)
T ss_dssp             CCSCTTTSCHHH-------HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-------CHHHHHHH
T ss_pred             CcccccccCccc-------cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-------chHHHHHH
Confidence            999866543221       457899999999887 678999999999999999999766654322       11111111


Q ss_pred             HhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          220 YIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .......+...                  +..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus       231 ~~~~~~~~~~~------------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          231 YEDRHQLPAPK------------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             HHTTCCCCCCS------------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             hhccCCCCCCC------------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            11111111111                  11277999999999999999999999999988653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.2e-37  Score=266.82  Aligned_cols=196  Identities=19%  Similarity=0.228  Sum_probs=151.8

Q ss_pred             ceecHHHHHH----HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------
Q 039895           43 RSFSADELKT----ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------   89 (284)
Q Consensus        43 ~~~~~~~l~~----~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------   89 (284)
                      ..++++.+..    ..+.|...+.||+|+||.||+|..  ++..||||++...                           
T Consensus         8 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   87 (335)
T 3dls_A            8 KAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE   87 (335)
T ss_dssp             -CEECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC
T ss_pred             ccccccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC
Confidence            3444444443    346788889999999999999987  8899999988643                           


Q ss_pred             ----------------------CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 ----------------------FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 ----------------------~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                                            +|.                ...+..++.||+.||.|||   +.+|+||||||+|||++
T Consensus        88 h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~  164 (335)
T 3dls_A           88 HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIA  164 (335)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred             CCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEc
Confidence                                  110                0456789999999999999   89999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      .++.+||+|||++..........    ...||+.|+|||++.+..+ +.++|||||||++|+|++|..||....      
T Consensus       165 ~~~~~kL~Dfg~a~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------  234 (335)
T 3dls_A          165 EDFTIKLIDFGSAAYLERGKLFY----TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE------  234 (335)
T ss_dssp             TTSCEEECCCTTCEECCTTCCBC----EECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG------
T ss_pred             CCCcEEEeecccceECCCCCcee----ccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH------
Confidence            99999999999998775443221    2568999999999988876 789999999999999999999985321      


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                       .........        +...+..+.+|+.+||+.||++|||+.++++.
T Consensus       235 -----------------~~~~~~~~~--------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          235 -----------------ETVEAAIHP--------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -----------------GGTTTCCCC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             -----------------HHHhhccCC--------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                             000000000        00122347899999999999999999999874

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-37  Score=272.80  Aligned_cols=194  Identities=16%  Similarity=0.165  Sum_probs=149.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .+.|...+.||+|+||.||+|..  +|+.||+|++...                                         +
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            46788889999999999999998  7899999998643                                         1


Q ss_pred             CC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec--CCcceeeccccccccCCCCc
Q 039895           91 PF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE--ENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |.                +.....++.||+.||.|||   +.+|+||||||+|||++.  ++.+||+|||++........
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  206 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  206 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence            11                1567789999999999999   999999999999999974  46799999999987754432


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ..    ...||+.|+|||++.+..++.++|||||||++|||++|..||....        .......... ..+.  .++
T Consensus       207 ~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~i~~-~~~~--~~~  271 (387)
T 1kob_A          207 VK----VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--------DLETLQNVKR-CDWE--FDE  271 (387)
T ss_dssp             EE----EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHH-CCCC--CCS
T ss_pred             ee----eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CCCC--CCc
Confidence            21    1468999999999999999999999999999999999999996532        1111111111 1100  000


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .          .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       272 ~----------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          272 D----------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             S----------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             c----------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            0          01122334789999999999999999999986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.6e-37  Score=265.02  Aligned_cols=203  Identities=23%  Similarity=0.301  Sum_probs=145.2

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC--------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~--------------------------------------   89 (284)
                      ..+.|...+.||+|+||.||+|.+     .+..||+|++...                                      
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            345677778899999999999987     2347999998633                                      


Q ss_pred             ----------CC---------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCccee
Q 039895           90 ----------FP---------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQL  138 (284)
Q Consensus        90 ----------~~---------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl  138 (284)
                                +|                     ....++.++.||+.||.|||   +.+|+||||||+|||++.++.+||
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence                      11                     01456789999999999999   999999999999999999999999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||++........... .....+++.|+|||++.+..++.++||||||+++|+|++ |..||....     .......+
T Consensus       189 ~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~  262 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQ-GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-----NHEMYDYL  262 (313)
T ss_dssp             CSCSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHH
T ss_pred             eecCcceecccccccCc-ccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHH
Confidence            99999987654332211 122457889999999999899999999999999999999 777875432     11111111


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                         . .+....               .+...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       263 ---~-~~~~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          263 ---L-HGHRLK---------------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             ---H-TTCCCC---------------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---H-cCCCCC---------------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence               1 111000               0112234488999999999999999999999999999764

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.8e-37  Score=261.73  Aligned_cols=193  Identities=23%  Similarity=0.296  Sum_probs=137.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||+||+|..  +|+.||+|++...                                          
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            36788888999999999999999  8899999998654                                          


Q ss_pred             -CCC------------------chhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -FPF------------------SVSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -~~~------------------~~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                       +|.                  ......++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||++.....
T Consensus        86 e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  162 (290)
T 3fme_A           86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD  162 (290)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred             ehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence             111                  1456689999999999999   87 999999999999999999999999999977654


Q ss_pred             CCccccCCCCcccCccccccccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYR----TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      .....    ...||+.|+|||++    ....++.++|||||||++|+|++|..||....      ..... .........
T Consensus       163 ~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~-~~~~~~~~~  231 (290)
T 3fme_A          163 DVAKD----IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG------TPFQQ-LKQVVEEPS  231 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS------CHHHH-HHHHHHSCC
T ss_pred             ccccc----ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC------chHHH-HHHHhccCC
Confidence            32221    14689999999996    45678999999999999999999999986422      11111 111111111


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ....              ....+..+.+++.+||+.||++|||+.|+++
T Consensus       232 -~~~~--------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 -PQLP--------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             -CCCC--------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -CCcc--------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence             1100              0112234789999999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=7.2e-37  Score=257.11  Aligned_cols=194  Identities=24%  Similarity=0.385  Sum_probs=153.0

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+  +++.||+|++...                                          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   89 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR   89 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence            35688889999999999999999  6899999998643                                          


Q ss_pred             -----------CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           90 -----------FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        90 -----------~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                                 +|..                 ..+..++.||+.||.|||   +.+|+|+||||+|||++.++.+||+||
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcc
Confidence                       0100                 346789999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh
Q 039895          142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI  221 (284)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  221 (284)
                      |++.........    ....||+.|+|||++.+..++.++||||||+++|+|++|..|+...          ...... .
T Consensus       167 g~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~~-~  231 (284)
T 2a19_B          167 GLVTSLKNDGKR----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFTD-L  231 (284)
T ss_dssp             TTCEESSCCSCC----CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHHH-H
T ss_pred             hhheeccccccc----cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHHH-h
Confidence            999877554322    1256899999999999889999999999999999999998876321          111111 1


Q ss_pred             hcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          222 ENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ....+...                  .+..+.+++.+||+.||++|||+.|+++.|..+..+
T Consensus       232 ~~~~~~~~------------------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          232 RDGIISDI------------------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HTTCCCTT------------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             hccccccc------------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            11111111                  112377999999999999999999999999988654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=3.3e-37  Score=264.90  Aligned_cols=210  Identities=18%  Similarity=0.246  Sum_probs=149.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ++|...+.||+|+||+||+|..  +++.||||++...                                         +|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~  115 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  115 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence            5677888999999999999988  8899999998744                                         11


Q ss_pred             C------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCCCCccccCCC
Q 039895           92 F------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        92 ~------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                      .            ......++.||+.||.|||   +.+|+||||||+|||++.++ .+||+|||++.........    .
T Consensus       116 ~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~----~  188 (330)
T 3nsz_A          116 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----N  188 (330)
T ss_dssp             CCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC----C
T ss_pred             CchhHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc----c
Confidence            1            1556789999999999999   99999999999999999777 8999999999876543322    1


Q ss_pred             CcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc-------
Q 039895          159 RVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV-------  230 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  230 (284)
                      ...||+.|+|||++.+ ..++.++|||||||++|+|++|..||....   .....+.... ...........+       
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~---~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~  264 (330)
T 3nsz_A          189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH---DNYDQLVRIA-KVLGTEDLYDYIDKYNIEL  264 (330)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS---SHHHHHHHHH-HHHCHHHHHHHHHHTTCCC
T ss_pred             cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCC---chHHHHHHHH-HhcCCchhhhHHHHhcccc
Confidence            2568999999999877 578999999999999999999999986432   1111111111 100000000000       


Q ss_pred             ccc----ccCCCCC------CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPA----IVGEEGL------MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~----~~~~~~~------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ++.    +......      ...........+.+|+.+||+.||++|||+.|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000    0000000      00011123455889999999999999999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=6.6e-37  Score=263.38  Aligned_cols=204  Identities=22%  Similarity=0.282  Sum_probs=153.8

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CC-----cceEEEeecCC------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QD-----RPISVMKFEDT------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~-----~~vavK~~~~~------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|..  .+     ..||+|++...                                    
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            446788889999999999999998  33     36999998653                                    


Q ss_pred             -------CCC-----------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC
Q 039895           90 -------FPF-----------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE  133 (284)
Q Consensus        90 -------~~~-----------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~  133 (284)
                             +|.                             ....+.++.||+.||.|||   +.+|+||||||+|||++.+
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence                   111                             1235678999999999999   8999999999999999999


Q ss_pred             CcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCcccc
Q 039895          134 NVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYR  212 (284)
Q Consensus       134 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~  212 (284)
                      +.+||+|||++........... .....||+.|+|||++.+..++.++|||||||++|||++ |..||....    ....
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~----~~~~  275 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIV-KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL----VNSK  275 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEE-CSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----SSHH
T ss_pred             CeEEECccccccccccccceee-cCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc----hhHH
Confidence            9999999999987644322211 122567889999999988899999999999999999999 888886432    1111


Q ss_pred             HHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ....+..    .. ... .             +...+..+.+++.+||+.||++|||+.||++.|+++.++
T Consensus       276 ~~~~~~~----~~-~~~-~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          276 FYKLVKD----GY-QMA-Q-------------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHHHH----TC-CCC-C-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhc----CC-CCC-C-------------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            1111111    10 000 0             011123478999999999999999999999999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=6.1e-38  Score=268.58  Aligned_cols=210  Identities=19%  Similarity=0.311  Sum_probs=158.9

Q ss_pred             ecHHHHHHHhcCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC----------------------------
Q 039895           45 FSADELKTATDDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT----------------------------   89 (284)
Q Consensus        45 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~----------------------------   89 (284)
                      +..+++....++|...+.||+|+||.||+|.+.       +..||+|++...                            
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            444555666788988999999999999999873       578999998643                            


Q ss_pred             --------------CCC-------------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE
Q 039895           90 --------------FPF-------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL  130 (284)
Q Consensus        90 --------------~~~-------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl  130 (284)
                                    +|.                         ...++.++.||+.||.|||   +.+|+||||||+|||+
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEE
Confidence                          111                         1245678999999999999   8999999999999999


Q ss_pred             ecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCc
Q 039895          131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGE  209 (284)
Q Consensus       131 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~  209 (284)
                      +.++.+||+|||++........... .....||+.|+|||++.+..++.++|||||||++|+|++ |..||....     
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----  245 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----  245 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEG-GGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----
T ss_pred             cCCCeEEECcCcccccccccccccc-ccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC-----
Confidence            9999999999999976644322211 112467889999999988889999999999999999999 778875432     


Q ss_pred             cccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          210 DYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                         ........ ........               ....+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus       246 ---~~~~~~~~-~~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          246 ---NEQVLRFV-MEGGLLDK---------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             ---HHHHHHHH-HTTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ---HHHHHHHH-HcCCcCCC---------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence               11112111 11111110               11223347899999999999999999999999988754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.3e-37  Score=268.21  Aligned_cols=208  Identities=15%  Similarity=0.204  Sum_probs=142.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|..  +|+.||||++...                                          
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            35678888999999999999998  7899999998543                                          


Q ss_pred             -------CC-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -------FP-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -------~~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                             ++             .......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus       104 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          104 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  180 (367)
T ss_dssp             CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence                   00             00446678999999999999   99999999999999999999999999999987643


Q ss_pred             CCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--c
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--F  226 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~  226 (284)
                      ..      ....||+.|+|||++.+ ..++.++||||+||+++||++|+.||.+..     .......+........  +
T Consensus       181 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~l~~i~~~~g~~~~~~  249 (367)
T 1cm8_A          181 EM------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD-----HLDQLKEIMKVTGTPPAEF  249 (367)
T ss_dssp             SC------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCHHH
T ss_pred             cc------CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCCHHH
Confidence            22      12578999999999877 679999999999999999999999997532     1111111111110000  0


Q ss_pred             -ccccc-------ccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 -KEIVD-------PAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 -~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ..+..       ..+.......+ .........+.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence             00000       00000000000 001122345789999999999999999999986

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.2e-36  Score=265.85  Aligned_cols=205  Identities=17%  Similarity=0.219  Sum_probs=143.5

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +++.||||++...                                          
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36788889999999999999998  7899999998643                                          


Q ss_pred             -------CCC------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 -------FPF------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -------~~~------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                             +|.            ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus       104 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  180 (371)
T 2xrw_A          104 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  180 (371)
T ss_dssp             EEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-------
T ss_pred             ceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccccccc
Confidence                   010            0446679999999999999   899999999999999999999999999999776433


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-------
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-------  223 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------  223 (284)
                      ...    ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ...........       
T Consensus       181 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~~~~~~~  248 (371)
T 2xrw_A          181 FMM----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD--------HIDQWNKVIEQLGTPCPE  248 (371)
T ss_dssp             -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHC-CCCCCHH
T ss_pred             ccc----CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhCCCCHH
Confidence            211    12578999999999999899999999999999999999999996532        11111111100       


Q ss_pred             ---------------C-cc-----cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 ---------------E-SF-----KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ---------------~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                     . .+     .........   .............+.+|+.+||+.||++|||+.|+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLF---PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGS---CCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHhhhHHHHHHhhCccccccchhhhcccccC---cccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                           0 00     000000000   00011123345678999999999999999999999863

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.9e-37  Score=267.88  Aligned_cols=197  Identities=20%  Similarity=0.239  Sum_probs=140.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~   91 (284)
                      .+.|...+.||+|+||+||++..  +++.||||++...                                        +|
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            35788889999999999999999  7899999998754                                        22


Q ss_pred             Cc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc--ceeeccccccccCCCCccc
Q 039895           92 FS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV--AQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        92 ~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~--~kl~Dfg~a~~~~~~~~~~  154 (284)
                      ..               .....++.|++.||.|||   +.+|+||||||+|||++.++.  +||+|||+++.......  
T Consensus        99 ~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~--  173 (361)
T 3uc3_A           99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ--  173 (361)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC--
Confidence            11               566789999999999999   999999999999999987765  99999999875432221  


Q ss_pred             cCCCCcccCccccccccccCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEK-SDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                        .....||+.|+|||++.+..++.+ +|||||||++|+|++|..||....    ................ ..      
T Consensus       174 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~~~~~~~~~~-~~------  240 (361)
T 3uc3_A          174 --PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE----EPRDYRKTIQRILSVK-YS------  240 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--------CCCHHHHHHHHHTTC-CC------
T ss_pred             --CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc----cHHHHHHHHHHHhcCC-CC------
Confidence              122579999999999988887655 899999999999999999996532    1122222222222111 00      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                              .+.....+..+.+|+.+||+.||++|||+.|+++.
T Consensus       241 --------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          241 --------IPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             --------CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             --------CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence                    00011122347899999999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-37  Score=269.48  Aligned_cols=200  Identities=23%  Similarity=0.324  Sum_probs=138.9

Q ss_pred             CCCCCeeeecCCceEEEEEe--CC---cceEEEeecCC------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QD---RPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~---~~vavK~~~~~------------------------------------------   89 (284)
                      |...+.||+|+||.||+|.+  ++   ..||+|.+...                                          
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            33456899999999999997  22   36899988643                                          


Q ss_pred             -CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|.                ....+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence             110                0456789999999999999   89999999999999999999999999999987644322


Q ss_pred             cc-cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          153 HI-NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       153 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .. .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||....     .......+.    .+..  ..
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~~~~----~~~~--~~  316 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLL----QGRR--LL  316 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHHHHH----TTCC--CC
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHHHHH----cCCC--CC
Confidence            11 11122457889999999998899999999999999999999 455554322     112222111    1110  00


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .             +..++..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus       317 ~-------------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          317 Q-------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             C-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             C-------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            0             112233488999999999999999999999999998753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=3.6e-37  Score=266.85  Aligned_cols=207  Identities=15%  Similarity=0.199  Sum_probs=149.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CC-cceEEEeecCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QD-RPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~-~~vavK~~~~~------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  ++ ..||+|++...                                          
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~   98 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC   98 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence            5788889999999999999998  44 68999998753                                          


Q ss_pred             ----CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE-------------------
Q 039895           90 ----FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL-------------------  130 (284)
Q Consensus        90 ----~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl-------------------  130 (284)
                          +|                .......++.||+.||.|||   +.+|+||||||+|||+                   
T Consensus        99 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~  175 (355)
T 2eu9_A           99 IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS  175 (355)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred             EEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccccc
Confidence                11                11456789999999999999   9999999999999999                   


Q ss_pred             ecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       131 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      +.++.+||+|||++........      ...||+.|+|||++.+..++.++|||||||++|||++|..||....     .
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~  244 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHEHHT------TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE-----N  244 (355)
T ss_dssp             ESCCCEEECCCTTCEETTSCCC------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----H
T ss_pred             cCCCcEEEeecCcccccccccc------CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----H
Confidence            6788999999999976543322      2578999999999999999999999999999999999999996432     1


Q ss_pred             ccHHHHHHHHhhcCc--------ccccc-cccccCCC---------------CCCChhhHHHHHHHHHHHHHhhcCCCCC
Q 039895          211 YRLQDLVKKYIENES--------FKEIV-DPAIVGEE---------------GLMWPEKEQQLLICTELAFKCLSESEGD  266 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~  266 (284)
                      ......+........        ..... ........               .............+.+|+.+||+.||++
T Consensus       245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  324 (355)
T 2eu9_A          245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ  324 (355)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence            111111111111000        00000 00000000               0000011233456889999999999999


Q ss_pred             CCCHHHHHH
Q 039895          267 RPTIVQVAK  275 (284)
Q Consensus       267 Rps~~ev~~  275 (284)
                      |||+.|+++
T Consensus       325 Rpt~~e~l~  333 (355)
T 2eu9_A          325 RITLAEALL  333 (355)
T ss_dssp             SCCHHHHTT
T ss_pred             CcCHHHHhc
Confidence            999999974

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.5e-37  Score=260.89  Aligned_cols=203  Identities=21%  Similarity=0.307  Sum_probs=145.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe---CCc--ceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL---QDR--PISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~---~~~--~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+   ++.  .||||++...                                        
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   97 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence            5688888999999999999986   223  5899988643                                        


Q ss_pred             ---CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ---FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ---~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                         +|.                ......++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++......
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence               111                1456789999999999999   899999999999999999999999999999887654


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ...........+|+.|+|||++.+..++.++||||||+++|+|++ |..||....        ...............  
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~--  244 (291)
T 1u46_A          175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--------GSQILHKIDKEGERL--  244 (291)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTSCCCC--
T ss_pred             ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--------HHHHHHHHHccCCCC--
Confidence            433222233567889999999988889999999999999999999 999986432        122222221111100  


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                   +.....+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus       245 -------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          245 -------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             -------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             -------------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence                         01112234588999999999999999999999999987653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.5e-37  Score=261.93  Aligned_cols=209  Identities=18%  Similarity=0.247  Sum_probs=144.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +|+.||+|++...                                           
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            5677888999999999999999  6899999988543                                           


Q ss_pred             CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|.               ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..........
T Consensus        83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  159 (311)
T 4agu_A           83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY  159 (311)
T ss_dssp             CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence            111               1456789999999999999   8999999999999999999999999999998765432221


Q ss_pred             cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc----------
Q 039895          155 NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN----------  223 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------  223 (284)
                         ....||+.|+|||++.+ ..++.++||||||+++|+|++|..||....     .......+......          
T Consensus       160 ---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  231 (311)
T 4agu_A          160 ---DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS-----DVDQLYLIRKTLGDLIPRHQQVFS  231 (311)
T ss_dssp             ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred             ---CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhcccccccccccc
Confidence               12578999999999876 568999999999999999999999986532     11111111111100          


Q ss_pred             -Cc-ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 -ES-FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       .. ......+... ............+..+.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          232 TNQYFSGVKIPDPE-DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             TCGGGTTCCCCCCS-SCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             cccccccCcCCCcc-ccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             00 0000000000 000000001123445789999999999999999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.6e-37  Score=283.36  Aligned_cols=202  Identities=23%  Similarity=0.304  Sum_probs=155.0

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCC
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPF   92 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~   92 (284)
                      ..++|...+.||+|+||.||+|.+ .+..||||++...                                       +|.
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~  344 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS  344 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhc
Confidence            345566778899999999999999 5577999998754                                       111


Q ss_pred             -----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           93 -----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        93 -----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                       ...++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......... 
T Consensus       345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-  420 (535)
T 2h8h_A          345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-  420 (535)
T ss_dssp             TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT-
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec-
Confidence                             1456789999999999999   9999999999999999999999999999998765422111 


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                       .....++..|+|||++....++.++|||||||++|||++ |..||....        ........ ..+..        
T Consensus       421 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--------~~~~~~~i-~~~~~--------  482 (535)
T 2h8h_A          421 -RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQV-ERGYR--------  482 (535)
T ss_dssp             -TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--------HHHHHHHH-HTTCC--------
T ss_pred             -ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-HcCCC--------
Confidence             112456889999999988899999999999999999999 888886432        11111111 11100        


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                             .+.+..++..+.+||.+||+.||++|||+.+|++.|+.+..+
T Consensus       483 -------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          483 -------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             -------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence                   001112334588999999999999999999999999988653

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=9.7e-37  Score=265.00  Aligned_cols=220  Identities=17%  Similarity=0.247  Sum_probs=145.8

Q ss_pred             HHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------
Q 039895           47 ADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------   89 (284)
Q Consensus        47 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------   89 (284)
                      -.+.....++|...+.||+|+||.||+|..  +|..||||++...                                   
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            455667788999999999999999999998  6899999988543                                   


Q ss_pred             ------------CCCc------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCccee
Q 039895           90 ------------FPFS------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQL  138 (284)
Q Consensus        90 ------------~~~~------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl  138 (284)
                                  +|..                  .....++.|++.||.|||.. +.+|+||||||+|||++. ++.+||
T Consensus        95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred             cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEE
Confidence                        1110                  33567899999999999943 689999999999999997 899999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||++.........    ....||+.|+|||++.+.. ++.++|||||||++|+|++|..||....    ....+....
T Consensus       174 ~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~----~~~~~~~~~  245 (360)
T 3e3p_A          174 CDFGSAKKLSPSEPN----VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN----SAGQLHEIV  245 (360)
T ss_dssp             CCCTTCBCCCTTSCC----CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHH
T ss_pred             eeCCCceecCCCCCc----ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC----hHHHHHHHH
Confidence            999999877544322    1256899999999986654 8999999999999999999999996532    111111111


Q ss_pred             HHHhhcC-cccc-----cccccccCCCCCCCh-----hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          218 KKYIENE-SFKE-----IVDPAIVGEEGLMWP-----EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       218 ~~~~~~~-~~~~-----~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....... ....     ..+..........+.     ........+.+|+.+||+.||++|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            1110000 0000     000000000000010     01123456889999999999999999999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=4.6e-37  Score=267.84  Aligned_cols=197  Identities=22%  Similarity=0.326  Sum_probs=149.4

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------   89 (284)
                      ....++|...+.||+|+||.||+|.+  +|+.||||++...                                       
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            34456788889999999999999998  6899999987532                                       


Q ss_pred             -----------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccc
Q 039895           90 -----------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL  143 (284)
Q Consensus        90 -----------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~  143 (284)
                                 +|.               ......++.||+.||.|||   +.+|+|+||||+|||++.++.++|+|||+
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~  246 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGF  246 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence                       111               0456789999999999999   89999999999999999999999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +..+......    ....||+.|+|||++.+      ..++.++|||||||++|+|++|..||....        .....
T Consensus       247 ~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--------~~~~~  314 (365)
T 2y7j_A          247 SCHLEPGEKL----RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR--------QILML  314 (365)
T ss_dssp             CEECCTTCCB----CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHH
T ss_pred             ccccCCCccc----ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC--------HHHHH
Confidence            9877543322    22579999999998753      358899999999999999999999986432        11111


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .... .+....            ..+.....+..+.+++.+||+.||++|||+.|+++
T Consensus       315 ~~i~-~~~~~~------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          315 RMIM-EGQYQF------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHH-HTCCCC------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHH-hCCCCC------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1111 111000            00111122344789999999999999999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=4.6e-37  Score=272.52  Aligned_cols=197  Identities=18%  Similarity=0.230  Sum_probs=143.1

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      ...+.|...+.||+|+||+||+|..  +++.||||++...                                        
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            3457888899999999999999998  7889999998642                                        


Q ss_pred             --------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---cceeecccc
Q 039895           90 --------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQLFDFTL  143 (284)
Q Consensus        90 --------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl~Dfg~  143 (284)
                              +|.               +.....++.|++.||.|||   +.+|+||||||+|||++.++   .+||+|||+
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred             CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeeccc
Confidence                    110               1567789999999999999   89999999999999997544   599999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      ++........    ....||+.|+|||++.+   ..++.++|||||||++|+|++|..||....    ....+...+.  
T Consensus       289 a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~i~--  358 (419)
T 3i6u_A          289 SKILGETSLM----RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQIT--  358 (419)
T ss_dssp             TTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS----SSCCHHHHHH--
T ss_pred             ceecCCCccc----cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc----chHHHHHHHh--
Confidence            9876543221    22679999999999853   568889999999999999999999996532    1112222211  


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        .+.....            .......+..+.+|+.+||+.||++|||+.|+++
T Consensus       359 --~~~~~~~------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          359 --SGKYNFI------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             --TTCCCCC------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --cCCCCCC------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence              1110000            0011123345889999999999999999999986

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.4e-37  Score=264.60  Aligned_cols=211  Identities=21%  Similarity=0.263  Sum_probs=155.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe------CCcceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL------QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~------~~~~vavK~~~~~---------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|.+      ++..||||++...                                       
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4577778999999999999984      6889999998654                                       


Q ss_pred             ----CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ----FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ----~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                          +|                .....+.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence                11                11456789999999999999   89999999999999999999999999999988765


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-------CCCccccHHHHHHHHhh
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHF-------DDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~~~  222 (284)
                      ............++..|+|||++.+..++.++|||||||++|+|++|..|+.....       ...........+.....
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK  277 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred             cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence            44322222234678889999999888899999999999999999999988753210       00000000000111111


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ....               .+.+..++..+.+++.+||+.||++|||+.||++.|+++.++
T Consensus       278 ~~~~---------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          278 NNGR---------------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             TTCC---------------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCC---------------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            1000               011122334588999999999999999999999999998763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.7e-37  Score=265.46  Aligned_cols=196  Identities=21%  Similarity=0.264  Sum_probs=147.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..     +++.||||++...                                        
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5788889999999999999998     6789999998532                                        


Q ss_pred             ------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 ------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 ------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                            +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence                  111               1456678999999999999   8999999999999999999999999999998764


Q ss_pred             CCCccccCCCCcccCccccccccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTG--DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      .......  ....||+.|+|||++.+.  .++.++|||||||++|||++|..||.....    ................ 
T Consensus       211 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~~-  283 (355)
T 1vzo_A          211 ADETERA--YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSEP-  283 (355)
T ss_dssp             GGGGGGG--CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS----CCCHHHHHHHHHHCCC-
T ss_pred             cCCCCcc--cCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc----cchHHHHHHHHhccCC-
Confidence            3322222  125799999999998853  478999999999999999999999965331    1122222222211100 


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAKQ  276 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~~  276 (284)
                            ..          +......+.+|+.+||+.||++||     |+.|+++.
T Consensus       284 ------~~----------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          284 ------PY----------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             ------CC----------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ------CC----------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence                  00          111223478999999999999999     99998764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.4e-37  Score=267.34  Aligned_cols=202  Identities=20%  Similarity=0.198  Sum_probs=148.2

Q ss_pred             HHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------
Q 039895           50 LKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        50 l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------   89 (284)
                      +....+.|...+.||+|+||.||+|..  ++..||+|++...                                      
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            445567788899999999999999998  7889999987422                                      


Q ss_pred             --------CCC-------------------------------------------------------chhHHHHHHHHHHH
Q 039895           90 --------FPF-------------------------------------------------------SVSKLKIAIEIASA  106 (284)
Q Consensus        90 --------~~~-------------------------------------------------------~~~~~~i~~~i~~g  106 (284)
                              +|.                                                       ......++.||+.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence                    221                                                       12245689999999


Q ss_pred             HHHhccCCCCCeeecccccCcEEEecCC--cceeeccccccccCCCCccc-cCCCCcccCccccccccccC--CCCCcch
Q 039895          107 VAYLHVGFSRPVVSRDIKPTTIVLQEEN--VAQLFDFTLSLSIPEGETHI-NDSNRVIGTFGFMAPEYRTT--GDFSEKS  181 (284)
Q Consensus       107 L~~LH~~~~~~ivHrDlkp~NILl~~~~--~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~  181 (284)
                      |.|||   +.+|+||||||+|||++.++  .+||+|||++..+....... .......||+.|+|||++.+  ..++.++
T Consensus       181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  257 (345)
T 3hko_A          181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC  257 (345)
T ss_dssp             HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred             HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence            99999   89999999999999998776  89999999998654322111 11123578999999999865  5789999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhc
Q 039895          182 DVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLS  261 (284)
Q Consensus       182 DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  261 (284)
                      |||||||++|||++|..||....        ...............             ..+........+.+|+.+||+
T Consensus       258 DiwslG~il~el~~g~~pf~~~~--------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~li~~~l~  316 (345)
T 3hko_A          258 DAWSAGVLLHLLLMGAVPFPGVN--------DADTISQVLNKKLCF-------------ENPNYNVLSPLARDLLSNLLN  316 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCT-------------TSGGGGGSCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCC--------hHHHHHHHHhccccc-------------CCcccccCCHHHHHHHHHHcC
Confidence            99999999999999999986432        112222221111000             001111233458899999999


Q ss_pred             CCCCCCCCHHHHHH
Q 039895          262 ESEGDRPTIVQVAK  275 (284)
Q Consensus       262 ~~p~~Rps~~ev~~  275 (284)
                      .||.+|||+.|+++
T Consensus       317 ~~p~~Rps~~~~l~  330 (345)
T 3hko_A          317 RNVDERFDAMRALQ  330 (345)
T ss_dssp             SCTTTSCCHHHHHH
T ss_pred             CChhHCCCHHHHhc
Confidence            99999999999986

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=4.7e-37  Score=263.18  Aligned_cols=194  Identities=22%  Similarity=0.280  Sum_probs=149.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|..  +|..||+|++...                                          
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            35677888999999999999998  7899999998643                                          


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC----cceeecccccc
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN----VAQLFDFTLSL  145 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~Dfg~a~  145 (284)
                           +|.               ......++.|++.||.|||   +.+|+||||||+|||++.++    .+||+|||++.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence                 111               0567789999999999999   89999999999999999888    79999999998


Q ss_pred             ccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          146 SIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      ........    ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        .......... ..
T Consensus       168 ~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~-~~  234 (321)
T 2a2a_A          168 EIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITS-VS  234 (321)
T ss_dssp             ECCTTCCC----CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHT-TC
T ss_pred             ecCccccc----cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHh-cc
Confidence            76543321    12568999999999998899999999999999999999999986432        1111111111 10


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .  ..++.          .....+..+.+++.+||+.||++|||+.|+++
T Consensus       235 ~--~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          235 Y--DFDEE----------FFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             C--CCCHH----------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             c--ccChh----------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            0  00000          01122344789999999999999999999986

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.2e-36  Score=257.78  Aligned_cols=203  Identities=22%  Similarity=0.308  Sum_probs=149.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--C---CcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--Q---DRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~----------------------------------------   89 (284)
                      ..|...+.||+|+||+||+|.+  +   ...||+|.+...                                        
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            3466678999999999999997  1   225899988653                                        


Q ss_pred             ---CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ---FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ---~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                         +|.                ....+.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++......
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence               111                1456789999999999999   999999999999999999999999999999876543


Q ss_pred             Cccc-cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHI-NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      .... .......||+.|+|||.+.+..++.++||||||+++|+|++|..|++...    ...........    ...  .
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~~~~~----~~~--~  251 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----NTFDITVYLLQ----GRR--L  251 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS----CTTTHHHHHHT----TCC--C
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC----CHHHHHHHHhc----CCC--C
Confidence            3211 12223567889999999998899999999999999999999655544322    11111111111    100  0


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..             +...+..+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus       252 ~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          252 LQ-------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             CC-------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CC-------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            00             011223488999999999999999999999999998764

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=5.9e-37  Score=265.70  Aligned_cols=213  Identities=15%  Similarity=0.207  Sum_probs=150.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|+.||+|++...                                           
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5688889999999999999998  7899999987543                                           


Q ss_pred             --------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 --------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 --------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                              +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..
T Consensus        97 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A           97 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA  173 (351)
T ss_dssp             CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence                    111               0457789999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccc-cCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-
Q 039895          147 IPEGETHI-NDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-  223 (284)
Q Consensus       147 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-  223 (284)
                      +....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||....     .......+...... 
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~  248 (351)
T 3mi9_A          174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-----EQHQLALISQLCGSI  248 (351)
T ss_dssp             CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCC
T ss_pred             ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCC
Confidence            65322211 11223578999999998876 458999999999999999999999986432     11122222221111 


Q ss_pred             --Cccccccccccc----CCCCCCChhhH-----HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 --ESFKEIVDPAIV----GEEGLMWPEKE-----QQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 --~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        ..+.........    ...........     ...+.+.+|+.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence              111111000000    00000000000     11345789999999999999999999986

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-36  Score=266.58  Aligned_cols=211  Identities=18%  Similarity=0.239  Sum_probs=148.0

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------CC-------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------FP-------------   91 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------~~-------------   91 (284)
                      ....+.|...+.||+|+||+||+|..  +|+.||||++...                        ++             
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            34567888899999999999999998  8899999987543                        00             


Q ss_pred             --------------------------------------Cc------------------hhHHHHHHHHHHHHHHhccCCC
Q 039895           92 --------------------------------------FS------------------VSKLKIAIEIASAVAYLHVGFS  115 (284)
Q Consensus        92 --------------------------------------~~------------------~~~~~i~~~i~~gL~~LH~~~~  115 (284)
                                                            ..                  .....++.||+.||.|||   +
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~  159 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---S  159 (383)
T ss_dssp             ---------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence                                                  00                  345678999999999999   9


Q ss_pred             CCeeecccccCcEEEe-cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHH
Q 039895          116 RPVVSRDIKPTTIVLQ-EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLEL  193 (284)
Q Consensus       116 ~~ivHrDlkp~NILl~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~el  193 (284)
                      .+|+||||||+|||++ .++.+||+|||+++........    ....||+.|+|||++.+. .++.++||||+||++|||
T Consensus       160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  235 (383)
T 3eb0_A          160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS----VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL  235 (383)
T ss_dssp             TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC----CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC----cCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence            9999999999999998 6889999999999876543322    125689999999998765 489999999999999999


Q ss_pred             HhCCCCCCCCCCCCCccccHHHHHHHHhhc---------CcccccccccccCCCCCCCh--hhHHHHHHHHHHHHHhhcC
Q 039895          194 LTGKKISYSSHFDDGEDYRLQDLVKKYIEN---------ESFKEIVDPAIVGEEGLMWP--EKEQQLLICTELAFKCLSE  262 (284)
Q Consensus       194 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~  262 (284)
                      ++|..||....    ....+...+......         .......-+...   ...+.  .+...+..+.+|+.+||+.
T Consensus       236 l~g~~pf~~~~----~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~  308 (383)
T 3eb0_A          236 ILGKPLFSGET----SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK---AKDWRKILPEGTPSLAIDLLEQILRY  308 (383)
T ss_dssp             HHSSCSSCCSS----HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCC---CCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred             HhCCCCCCCCC----hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccC---cccHHhhCCCCCCHHHHHHHHHHccC
Confidence            99999997532    111111111111000         000000000000   00000  0112334588999999999


Q ss_pred             CCCCCCCHHHHHH
Q 039895          263 SEGDRPTIVQVAK  275 (284)
Q Consensus       263 ~p~~Rps~~ev~~  275 (284)
                      ||++|||+.|+++
T Consensus       309 dP~~R~t~~e~l~  321 (383)
T 3eb0_A          309 EPDLRINPYEAMA  321 (383)
T ss_dssp             SGGGSCCHHHHHT
T ss_pred             ChhhCCCHHHHhc
Confidence            9999999999984

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=8.4e-37  Score=263.03  Aligned_cols=201  Identities=21%  Similarity=0.283  Sum_probs=153.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe---------CCcceEEEeecCC-----------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL---------QDRPISVMKFEDT-----------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~---------~~~~vavK~~~~~-----------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+         ++..||+|++...                                   
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            36788889999999999999986         3467999998653                                   


Q ss_pred             --------CC-------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE
Q 039895           90 --------FP-------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL  130 (284)
Q Consensus        90 --------~~-------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl  130 (284)
                              +|                               ....++.++.||+.||.|||   +.+|+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence                    11                               11345778999999999999   8999999999999999


Q ss_pred             ecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCc
Q 039895          131 QEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGE  209 (284)
Q Consensus       131 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~  209 (284)
                      +.++.+||+|||++........... .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||....     
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----  264 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKK-TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----  264 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEEC-CSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----
T ss_pred             cCCCCEEEccccccccccccccccc-cCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC-----
Confidence            9999999999999987654432221 122457889999999988889999999999999999999 888886432     


Q ss_pred             cccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          210 DYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                         ......... .......               +..++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus       265 ---~~~~~~~~~-~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          265 ---VEELFKLLK-EGHRMDK---------------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             ---HHHHHHHHH-HTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHh-cCCCCCC---------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence               112221111 1110000               11223347899999999999999999999999999875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=3.5e-36  Score=257.22  Aligned_cols=207  Identities=17%  Similarity=0.246  Sum_probs=147.8

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC---------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---------------------------------------   89 (284)
                      ++....++|...+.||+|+||.||+|.+.+ .||+|++...                                       
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  105 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA  105 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence            333345788899999999999999999865 4999998643                                       


Q ss_pred             ----CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ----FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ----~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                          +|                ....+..++.||+.||.|||   +.+|+||||||+|||++ ++.+||+|||++.....
T Consensus       106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~  181 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV  181 (319)
T ss_dssp             EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred             EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence                11                11567889999999999999   89999999999999998 68999999999876532


Q ss_pred             CCcc--ccCCCCcccCccccccccccC---------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          150 GETH--INDSNRVIGTFGFMAPEYRTT---------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       150 ~~~~--~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      ....  ........||+.|+|||++..         ..++.++|||||||++|||++|..||....        ......
T Consensus       182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~  253 (319)
T 2y4i_B          182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP--------AEAIIW  253 (319)
T ss_dssp             ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC--------HHHHHH
T ss_pred             ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH
Confidence            2111  111122468999999999864         357899999999999999999999986432        111111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .. ..+..........              +..+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       254 ~~-~~~~~~~~~~~~~--------------~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          254 QM-GTGMKPNLSQIGM--------------GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HH-HTTCCCCCCCSSC--------------CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             Hh-ccCCCCCCCcCCC--------------CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            11 1111111111111              12278999999999999999999999999988754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3.9e-37  Score=264.82  Aligned_cols=208  Identities=18%  Similarity=0.211  Sum_probs=150.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe---CCcceEEEeecCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL---QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~------------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|..   +++.||||++...                                          
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~   93 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC   93 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence            5688888999999999999987   6789999998653                                          


Q ss_pred             ----CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-----------------
Q 039895           90 ----FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-----------------  132 (284)
Q Consensus        90 ----~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-----------------  132 (284)
                          +|                .......++.||+.||.|||   +.+|+||||||+|||++.                 
T Consensus        94 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~  170 (339)
T 1z57_A           94 IVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT  170 (339)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence                11                11456789999999999999   899999999999999987                 


Q ss_pred             --CCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          133 --ENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       133 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                        ++.+||+|||++........      ...||+.|+|||++.+..++.++|||||||++|||++|..||....     .
T Consensus       171 ~~~~~~kl~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~  239 (339)
T 1z57_A          171 LINPDIKVVDFGSATYDDEHHS------TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD-----S  239 (339)
T ss_dssp             ESCCCEEECCCSSCEETTSCCC------SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC-----H
T ss_pred             ccCCCceEeeCcccccCccccc------cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----h
Confidence              66899999999976543221      2578999999999998899999999999999999999999986432     1


Q ss_pred             ccHHHHHHHHhhcCc--------ccccccc-cccCCC---------------CCCChhhHHHHHHHHHHHHHhhcCCCCC
Q 039895          211 YRLQDLVKKYIENES--------FKEIVDP-AIVGEE---------------GLMWPEKEQQLLICTELAFKCLSESEGD  266 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~---------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~  266 (284)
                      ......+........        ....... ......               .............+.+|+.+||+.||++
T Consensus       240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  319 (339)
T 1z57_A          240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK  319 (339)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence            111111111111000        0000000 000000               0000012244567889999999999999


Q ss_pred             CCCHHHHHHH
Q 039895          267 RPTIVQVAKQ  276 (284)
Q Consensus       267 Rps~~ev~~~  276 (284)
                      |||+.|+++.
T Consensus       320 Rpt~~ell~h  329 (339)
T 1z57_A          320 RITLREALKH  329 (339)
T ss_dssp             SCCHHHHTTS
T ss_pred             ccCHHHHhcC
Confidence            9999999853

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=270.17  Aligned_cols=188  Identities=17%  Similarity=0.202  Sum_probs=139.3

Q ss_pred             CCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CCCc---
Q 039895           60 GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FPFS---   93 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~~~---   93 (284)
                      .+.||+|+||.||+|..  +|..||+|++...                                         +|..   
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            45799999999999998  7899999998754                                         1211   


Q ss_pred             -------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE--ecCCcceeeccccccccCCCCccccCCC
Q 039895           94 -------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        94 -------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                                   .....++.||+.||.|||   +.+|+||||||+|||+  +.++.+||+|||+++........    .
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~----~  246 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL----K  246 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC----C
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc----c
Confidence                         456678999999999999   8999999999999999  45678999999999877543322    1


Q ss_pred             CcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ...||+.|+|||++.+..++.++|||||||++|||++|..||....        ............ +. ...       
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~~-~~-~~~-------  309 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--------DAETLNNILACR-WD-LED-------  309 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTC-CC-SCS-------
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhcc-CC-CCh-------
Confidence            2569999999999998899999999999999999999999996532        111122211110 00 000       


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          .........+.+|+.+||+.||++|||+.|+++
T Consensus       310 ----~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          310 ----EEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             ----GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                001122345889999999999999999999986

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.4e-37  Score=269.74  Aligned_cols=208  Identities=18%  Similarity=0.277  Sum_probs=136.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC-----------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF-----------------------------------------   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----------------------------------------   90 (284)
                      .+.|...+.||+|+||.||+|..  +|+.||||++....                                         
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            36788889999999999999998  78999999985430                                         


Q ss_pred             ---------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           91 ---------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        91 ---------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                                           ........++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus       108 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~  184 (367)
T 2fst_X          108 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD  184 (367)
T ss_dssp             CCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred             eEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence                                 001456789999999999999   99999999999999999999999999999977543


Q ss_pred             CCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc---
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES---  225 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---  225 (284)
                      ..      ....||+.|+|||++.+ ..++.++|||||||++|||++|..||.+..     .......+........   
T Consensus       185 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~l~~i~~~~g~p~~~~  253 (367)
T 2fst_X          185 EM------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-----HIDQLKLILRLVGTPGAEL  253 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCHHH
T ss_pred             cC------CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCHHH
Confidence            22      12578999999999876 678999999999999999999999996532     1111111111111100   


Q ss_pred             cccccc-------ccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVD-------PAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +..+..       ..+.......++ ........+.+|+.+||+.||++|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            000000       000000000000 00112345789999999999999999999975

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=9.4e-37  Score=268.47  Aligned_cols=209  Identities=19%  Similarity=0.248  Sum_probs=147.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC-------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      ..|...+.||+|+||+||+|.. .+..||+|++...                                           +
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~  119 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY  119 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence            3577788999999999999999 6666999987543                                           1


Q ss_pred             CCc------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-cCCcceeeccccccccCCCC
Q 039895           91 PFS------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 ~~~------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~Dfg~a~~~~~~~  151 (284)
                      |..                  .....++.||+.||.|||   +.+|+||||||+|||++ .++.+||+|||+++......
T Consensus       120 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~  196 (394)
T 4e7w_A          120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE  196 (394)
T ss_dssp             CSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             cCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence            111                  345678999999999999   99999999999999999 79999999999998764433


Q ss_pred             ccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc----
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF----  226 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----  226 (284)
                      ..    ....||+.|+|||++.+. .++.++|||||||++|||++|..||.+..    ....+...+... .....    
T Consensus       197 ~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~l~~i~~~~-g~p~~~~~~  267 (394)
T 4e7w_A          197 PN----VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES----GIDQLVEIIKVL-GTPSREQIK  267 (394)
T ss_dssp             CC----CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHH-CCCCHHHHH
T ss_pred             CC----cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHh-CCCCHHHHH
Confidence            22    125789999999998765 58999999999999999999999997532    111111111111 00000    


Q ss_pred             ---cccccccccCCCCCCCh--hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 ---KEIVDPAIVGEEGLMWP--EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                         .......+.......+.  .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence               00000000000000000  01113345889999999999999999999985

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=5.9e-37  Score=266.72  Aligned_cols=219  Identities=17%  Similarity=0.226  Sum_probs=151.2

Q ss_pred             ecHHHHHHHhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------
Q 039895           45 FSADELKTATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------   89 (284)
Q Consensus        45 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------   89 (284)
                      ....++....++|...+.||+|+||.||+|.. +|..||||++...                                  
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            34678888899999999999999999999998 8899999988431                                  


Q ss_pred             -----------------------CC---------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -----------------------FP---------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -----------------------~~---------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                                             +|               .......++.||+.||.|||   +.+|+||||||+|||++
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA  168 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred             cceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence                                   00               11457789999999999999   89999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      .++.+||+|||++.........    ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||....     .
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~  239 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADANK----THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST-----F  239 (362)
T ss_dssp             TTCCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----H
T ss_pred             CCCCEEEEecCccccccccccc----ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC-----H
Confidence            9999999999999755433221    12568999999998876 678999999999999999999999986532     1


Q ss_pred             ccHHHHHHHHhhcCccc-----------ccccccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          211 YRLQDLVKKYIENESFK-----------EIVDPAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ......+..........           ..+...........+ .........+.+|+.+||+.||++|||+.|+++
T Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            11111111111111100           000011111000000 011122345889999999999999999999985

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=5.2e-37  Score=269.67  Aligned_cols=147  Identities=18%  Similarity=0.202  Sum_probs=121.7

Q ss_pred             hcCCCCCCeeeec--CCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           54 TDDFDGGKVIMKC--LFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G--~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      .++|...+.||+|  +||+||+|..  +|+.||||++...                                        
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3568888999999  9999999999  7899999998644                                        


Q ss_pred             ---CCC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ---FPF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ---~~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                         +|.                 +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||.+.....
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence               111                 1456789999999999999   99999999999999999999999999998865532


Q ss_pred             CCc----cccCCCCcccCccccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          150 GET----HINDSNRVIGTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       150 ~~~----~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                      ...    .........||+.|+|||++.+  ..++.++|||||||++|||++|..||...
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence            211    1111222578999999999987  57999999999999999999999999754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.2e-36  Score=271.29  Aligned_cols=189  Identities=24%  Similarity=0.286  Sum_probs=148.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|+.||||++...                                           
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            5678888999999999999998  7999999998532                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........
T Consensus        96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence             221               1567789999999999999   999999999999999999999999999999876543321


Q ss_pred             ccCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                          ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||....     .   ........ .+...   . 
T Consensus       173 ----~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~---~~~~~~i~-~~~~~---~-  235 (476)
T 2y94_A          173 ----RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----V---PTLFKKIC-DGIFY---T-  235 (476)
T ss_dssp             ----CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----S---HHHHHHHH-TTCCC---C-
T ss_pred             ----cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----H---HHHHHHHh-cCCcC---C-
Confidence                12579999999999988765 689999999999999999999996432     1   11111111 11110   0 


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  +......+.+|+.+||+.||++|||+.|+++
T Consensus       236 ------------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          236 ------------PQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             ------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ------------CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                        0111234789999999999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=9.4e-37  Score=284.75  Aligned_cols=191  Identities=20%  Similarity=0.268  Sum_probs=149.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +++.||||++...                                          
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            46788889999999999999999  7888999998642                                          


Q ss_pred             ---CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ---FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ---~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                         +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus       420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~  496 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  496 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred             EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence               111               1456789999999999999   9999999999999999999999999999998643322


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..   .....||+.|+|||++.+..++.++|||||||++|||++|..||....        ........... ...    
T Consensus       497 ~~---~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~-~~~----  560 (674)
T 3pfq_A          497 VT---TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEH-NVA----  560 (674)
T ss_dssp             CC---BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHSS-CCC----
T ss_pred             cc---cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhC-CCC----
Confidence            21   223679999999999999999999999999999999999999997532        12222222211 100    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH-----HHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI-----VQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~ev~~  275 (284)
                                +  +......+.+|+.+||+.||++||++     .||++
T Consensus       561 ----------~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          561 ----------Y--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             ----------C--CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             ----------C--CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                      0  01123347899999999999999997     66653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.5e-36  Score=266.69  Aligned_cols=145  Identities=23%  Similarity=0.376  Sum_probs=106.5

Q ss_pred             CCC-CCeeeecCCceEEEEEe----CCcceEEEeecCC-----------------------------------------C
Q 039895           57 FDG-GKVIMKCLFYKLYKGFL----QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        57 f~~-~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      |.. +++||+|+||+||+|.+    ++..||||++...                                         +
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~  101 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY  101 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence            443 56899999999999996    4788999998754                                         1


Q ss_pred             CC-----------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE----ecCCcceeecccc
Q 039895           91 PF-----------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL----QEENVAQLFDFTL  143 (284)
Q Consensus        91 ~~-----------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl----~~~~~~kl~Dfg~  143 (284)
                      |.                       ......++.||+.||.|||   +.+|+||||||+|||+    +.++.+||+|||+
T Consensus       102 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A          102 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             CSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             CCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            11                       1235679999999999999   8999999999999999    6778999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSH  204 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~  204 (284)
                      ++................||+.|+|||++.+. .++.++|||||||++|||++|..||....
T Consensus       179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            98775433222222336789999999998874 58999999999999999999999996543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.7e-36  Score=255.47  Aligned_cols=191  Identities=23%  Similarity=0.239  Sum_probs=140.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      +.|...+.||+|+||.||++..  ++..||+|++...                                          +
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4677789999999999999998  7889999998644                                          1


Q ss_pred             CCc-------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE---ecCCcceeeccccccccC
Q 039895           91 PFS-------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        91 ~~~-------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~Dfg~a~~~~  148 (284)
                      |..                   .....++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||++....
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            111                   346789999999999999   9999999999999999   456789999999997765


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      .....    ....||+.|+|||++. ..++.++|||||||++|+|++|..||....        ................
T Consensus       179 ~~~~~----~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~~~  245 (285)
T 3is5_A          179 SDEHS----TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS--------LEEVQQKATYKEPNYA  245 (285)
T ss_dssp             ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCC
T ss_pred             CcccC----cCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC--------HHHHHhhhccCCcccc
Confidence            43221    1256899999999875 568999999999999999999999986432        1111111111110000


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .       .       .....+.+.+++.+||+.||++|||+.|+++
T Consensus       246 ~-------~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          246 V-------E-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             C----------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             c-------c-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0       0       0001234779999999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.1e-36  Score=261.36  Aligned_cols=151  Identities=28%  Similarity=0.412  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc---------cCCCCcccCccc
Q 039895           96 KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI---------NDSNRVIGTFGF  166 (284)
Q Consensus        96 ~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~gt~~y  166 (284)
                      .+.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++..........         .......||+.|
T Consensus       166 ~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             HHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            5789999999999999   9999999999999999999999999999998776542111         112235799999


Q ss_pred             cccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhH
Q 039895          167 MAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKE  246 (284)
Q Consensus       167 ~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
                      +|||++.+..++.++|||||||++|||++|..|+..          ....... ......               .....
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~-~~~~~~---------------~~~~~  296 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITD-VRNLKF---------------PLLFT  296 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHH-HHTTCC---------------CHHHH
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHH-hhccCC---------------Ccccc
Confidence            999999999999999999999999999998765421          1111111 111111               11233


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          247 QQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       247 ~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...+.+.+++.+||+.||++|||+.|+++
T Consensus       297 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          297 QKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             cCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            44556789999999999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=6.2e-37  Score=276.68  Aligned_cols=194  Identities=23%  Similarity=0.304  Sum_probs=146.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||+||+|..  +++.||||++...                                          
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            35688889999999999999998  7899999998432                                          


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe---cCCcceeeccccccccCCC
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~Dfg~a~~~~~~  150 (284)
                       +|..               .....++.||+.||.|||   +.+|+||||||+|||++   .++.+||+|||++......
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence             2211               456789999999999999   99999999999999995   4567999999999876543


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ...    ....||+.|+|||++.+ .++.++||||+||++|+|++|..||....        ......... .+....  
T Consensus       178 ~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~-~~~~~~--  241 (486)
T 3mwu_A          178 TKM----KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVE-TGKYAF--  241 (486)
T ss_dssp             --------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HTCCCS--
T ss_pred             Ccc----CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hCCCCC--
Confidence            321    12579999999999875 58999999999999999999999997532        111121111 111100  


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                ..+.....+..+.+|+.+||+.||++|||+.|+++.
T Consensus       242 ----------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          242 ----------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             ----------CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             ----------CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                      011112233457899999999999999999999863

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=6.5e-37  Score=263.22  Aligned_cols=215  Identities=16%  Similarity=0.178  Sum_probs=144.5

Q ss_pred             HHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------
Q 039895           51 KTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        51 ~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------   89 (284)
                      ....++|...+.||+|+||+||+|..  +++.||||++...                                       
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            34557899999999999999999987  8899999998643                                       


Q ss_pred             ----CCC--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-----cCCcceeeccccccc
Q 039895           90 ----FPF--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-----EENVAQLFDFTLSLS  146 (284)
Q Consensus        90 ----~~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-----~~~~~kl~Dfg~a~~  146 (284)
                          +|.              ......++.||+.||.|||   +.+|+||||||+|||++     .++.+||+|||++..
T Consensus       110 lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          110 LIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence                111              1456789999999999999   89999999999999995     455699999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc--
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN--  223 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--  223 (284)
                      ........   ....||+.|+|||++.+. .++.++|||||||++|||++|..||....    ....+..........  
T Consensus       187 ~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~~  259 (329)
T 3gbz_A          187 FGIPIRQF---THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS----EIDQLFKIFEVLGLPDD  259 (329)
T ss_dssp             HC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCT
T ss_pred             cCCccccc---CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC----HHHHHHHHHHHhCCCch
Confidence            65332211   125689999999998775 48999999999999999999999986432    111111111111000  


Q ss_pred             Cccccccc-c----cccCCCCCCCh--hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 ESFKEIVD-P----AIVGEEGLMWP--EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 ~~~~~~~~-~----~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..+..... +    ...........  ........+.+|+.+||+.||++|||+.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            00000000 0    00000000000  01113345789999999999999999999985

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=7.7e-37  Score=267.01  Aligned_cols=208  Identities=17%  Similarity=0.218  Sum_probs=145.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|.+  +|+.||||++...                                          
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            35787888999999999999998  7899999998653                                          


Q ss_pred             -------CC------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 -------FP------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -------~~------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                             +|            .......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus       121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  197 (371)
T 4exu_A          121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE  197 (371)
T ss_dssp             CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC------
T ss_pred             eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC
Confidence                   00            11556789999999999999   899999999999999999999999999999765433


Q ss_pred             CccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--cc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--FK  227 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  227 (284)
                      ..      ...||+.|+|||++.+ ..++.++|||||||++|+|++|..||....     .......+........  +.
T Consensus       198 ~~------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~  266 (371)
T 4exu_A          198 MT------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQLTQILKVTGVPGTEFV  266 (371)
T ss_dssp             --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCHHHH
T ss_pred             cC------CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCcHHHH
Confidence            22      2578999999999877 678999999999999999999999996532     1111111111100000  00


Q ss_pred             cccc--------ccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          228 EIVD--------PAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       228 ~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..+.        ..+.......+ .........+.+|+.+||+.||++|||+.|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            0000        00000000000 001122455889999999999999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6.9e-37  Score=272.42  Aligned_cols=145  Identities=17%  Similarity=0.293  Sum_probs=116.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+  +++.||||++...                                          
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            36788889999999999999998  7889999998653                                          


Q ss_pred             ------C--------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 ------F--------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ------~--------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                            +              ........++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus       105 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          105 LYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             EEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             EEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence                  0              011566789999999999999   99999999999999999999999999999987754


Q ss_pred             CCccc-------------------cCCCCcccCccccccccc-cCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039895          150 GETHI-------------------NDSNRVIGTFGFMAPEYR-TTGDFSEKSDVYSFGALLLELLTGKKISY  201 (284)
Q Consensus       150 ~~~~~-------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~G~il~elltg~~p~~  201 (284)
                      .....                   .......||+.|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            32110                   112336799999999986 45569999999999999999998655543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.1e-36  Score=277.42  Aligned_cols=193  Identities=23%  Similarity=0.348  Sum_probs=149.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||+|++...                                          
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            35688888999999999999999  7999999998532                                          


Q ss_pred             --CC-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 --FP-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 --~~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                        +|                 .+.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence              11                 11556789999999999999   899999999999999999999999999999877544


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEI  229 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  229 (284)
                      ....    ...||+.|+|||++.+..++.++|||||||++|||++|..||......    ............. ..++  
T Consensus       340 ~~~~----~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~~~i~~~i~~~~~~~p--  409 (576)
T 2acx_A          340 QTIK----GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERLVKEVPEEYS--  409 (576)
T ss_dssp             CCEE----CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCHHHHHHHHHHCCCCCC--
T ss_pred             cccc----ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhHHHHHHHhhcccccCC--
Confidence            3221    257999999999999989999999999999999999999999754311    1111111111111 1111  


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                                      ...+..+.+|+.+||+.||++||     ++.||++
T Consensus       410 ----------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          410 ----------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             ----------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ----------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                            11123478999999999999999     7788864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=4.3e-37  Score=265.15  Aligned_cols=198  Identities=22%  Similarity=0.278  Sum_probs=128.4

Q ss_pred             HhcCCCC-CCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           53 ATDDFDG-GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~-~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      ..++|.. .++||+|+||+||+|..  +|+.||||++...                                        
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  105 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM  105 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence            3467777 45799999999999999  6899999998654                                        


Q ss_pred             -CC-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceeeccccccccC
Q 039895           90 -FP-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 -~~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~Dfg~a~~~~  148 (284)
                       +|                 .......++.||+.||.|||   +.+|+||||||+|||++.   ++.+||+|||++....
T Consensus       106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~  182 (336)
T 3fhr_A          106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT  182 (336)
T ss_dssp             ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred             eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence             11                 11567789999999999999   899999999999999986   4559999999997664


Q ss_pred             CCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      .....     ...||+.|+|||++.+..++.++|||||||++|+|++|..||........     .............  
T Consensus       183 ~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~--  250 (336)
T 3fhr_A          183 QNALQ-----TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI-----SPGMKRRIRLGQY--  250 (336)
T ss_dssp             --------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred             ccccc-----cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh-----hhhHHHhhhcccc--
Confidence            33221     25689999999999888899999999999999999999999865331100     0000000000000  


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                ....+.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       251 ----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          251 ----------GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----------ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                      0000111123345789999999999999999999986

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3.2e-36  Score=258.75  Aligned_cols=190  Identities=21%  Similarity=0.279  Sum_probs=143.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||++..     +|+.||+|++...                                        
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            6788889999999999999987     6789999998643                                        


Q ss_pred             -----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~  173 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH  173 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence                 111               1456678999999999999   89999999999999999999999999999876433


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....   .....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ........... ...  
T Consensus       174 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~-~~~--  239 (327)
T 3a62_A          174 DGTV---THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--------RKKTIDKILKC-KLN--  239 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHT-CCC--
T ss_pred             CCcc---ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhC-CCC--
Confidence            2221   122579999999999998899999999999999999999999996432        11112211111 000  


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                      +              +......+.+++.+||+.||++||     ++.|+++
T Consensus       240 ~--------------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          240 L--------------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             C--------------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             C--------------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            0              011223478999999999999999     7777765

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.4e-36  Score=265.19  Aligned_cols=209  Identities=12%  Similarity=0.143  Sum_probs=147.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +++.||||++...                                           
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~   98 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   98 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence            5688888999999999999998  8899999998633                                           


Q ss_pred             ------------CC----------------CchhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEec------CC
Q 039895           90 ------------FP----------------FSVSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQE------EN  134 (284)
Q Consensus        90 ------------~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~------~~  134 (284)
                                  ++                .......++.||+.||.|||   +. +|+||||||+|||++.      .+
T Consensus        99 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~~  175 (373)
T 1q8y_A           99 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENLI  175 (373)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             CCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCcc
Confidence                        11                01456789999999999999   87 9999999999999954      34


Q ss_pred             cceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC--cccc
Q 039895          135 VAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDG--EDYR  212 (284)
Q Consensus       135 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~--~~~~  212 (284)
                      .+||+|||++........      ...||+.|+|||++.+..++.++|||||||++|||++|..||........  ....
T Consensus       176 ~~kl~Dfg~a~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  249 (373)
T 1q8y_A          176 QIKIADLGNACWYDEHYT------NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  249 (373)
T ss_dssp             EEEECCCTTCEETTBCCC------SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             eEEEcccccccccCCCCC------CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence            799999999977653321      25789999999999999999999999999999999999999975431110  0011


Q ss_pred             HHHHHHHHhhcCcccc-----------ccccc--ccCC-CCC----------CChhhHHHHHHHHHHHHHhhcCCCCCCC
Q 039895          213 LQDLVKKYIENESFKE-----------IVDPA--IVGE-EGL----------MWPEKEQQLLICTELAFKCLSESEGDRP  268 (284)
Q Consensus       213 ~~~~~~~~~~~~~~~~-----------~~~~~--~~~~-~~~----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  268 (284)
                      +...... .  +..+.           .+...  .... ...          ....+......+.+|+.+||+.||++||
T Consensus       250 ~~~~~~~-~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  326 (373)
T 1q8y_A          250 IAQIIEL-L--GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA  326 (373)
T ss_dssp             HHHHHHH-H--CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred             HHHHHHh-c--CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence            1111110 0  00000           00000  0000 000          0112345677789999999999999999


Q ss_pred             CHHHHHH
Q 039895          269 TIVQVAK  275 (284)
Q Consensus       269 s~~ev~~  275 (284)
                      |+.|+++
T Consensus       327 t~~ell~  333 (373)
T 1q8y_A          327 DAGGLVN  333 (373)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhh
Confidence            9999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=7.3e-37  Score=256.59  Aligned_cols=191  Identities=19%  Similarity=0.305  Sum_probs=128.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||+|++...                                          
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46788889999999999999998  8899999998532                                          


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|                .......++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++.......
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence              11                11567789999999999999   8999999999999999999999999999998765332


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ...   ....||+.|+|||++.+..++.++||||||+++|+|++|..||.......     .   .         .....
T Consensus       167 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~---~---------~~~~~  226 (278)
T 3cok_A          167 EKH---YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----T---L---------NKVVL  226 (278)
T ss_dssp             ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCS
T ss_pred             Ccc---eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----H---H---------HHHhh
Confidence            211   12568999999999998889999999999999999999999986533110     0   0         00000


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...        ..+...+..+.+++.+||+.||++|||+.++++
T Consensus       227 ~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          227 ADY--------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             SCC--------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccc--------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            000        001112234789999999999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4.3e-37  Score=277.61  Aligned_cols=193  Identities=23%  Similarity=0.329  Sum_probs=148.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|..  +|+.||||++...                                          
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            35677888999999999999999  7899999998533                                          


Q ss_pred             --CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE---ecCCcceeeccccccccCC
Q 039895           90 --FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 --~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~Dfg~a~~~~~  149 (284)
                        +|..               .....++.||+.||.|||   +.+|+||||||+|||+   +.++.+||+|||++.....
T Consensus       105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence              1111               456789999999999999   8999999999999999   4678999999999987755


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ......    ..||+.|+|||++.+ .++.++||||+||++|+|++|..||....        ......... .+...  
T Consensus       182 ~~~~~~----~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~-~~~~~--  245 (484)
T 3nyv_A          182 SKKMKD----KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN--------EYDILKKVE-KGKYT--  245 (484)
T ss_dssp             CCSHHH----HTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCCC--
T ss_pred             cccccc----CCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-cCCCC--
Confidence            432211    568999999999876 68999999999999999999999996532        111121111 11110  


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                ...+.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       246 ----------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          246 ----------FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             ----------CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence                      001111223445889999999999999999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.9e-37  Score=262.89  Aligned_cols=205  Identities=22%  Similarity=0.277  Sum_probs=146.1

Q ss_pred             cceecHHHHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------
Q 039895           42 IRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------   89 (284)
Q Consensus        42 ~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------   89 (284)
                      .+.+.+.++....+.|...+.||+|+||.||+|.+  +|+.||||++...                              
T Consensus        11 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             -----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             chhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            44555556666778899999999999999999999  8899999998543                              


Q ss_pred             -----------------CCC-----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc
Q 039895           90 -----------------FPF-----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV  135 (284)
Q Consensus        90 -----------------~~~-----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~  135 (284)
                                       +|.                 ......++.||+.||.|||   +.+|+|+||||+|||++.++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCC
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCC
Confidence                             110                 0345679999999999999   899999999999999999999


Q ss_pred             ceeeccccccccCCCCccccCCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          136 AQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       136 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      +||+|||++.........   .....||+.|+|||++.     ...++.++|||||||++|+|++|..||....      
T Consensus       168 ~kl~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------  238 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH------  238 (326)
T ss_dssp             EEECCCTTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC------
T ss_pred             EEEeeCcCceecCcCccc---cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc------
Confidence            999999998776432211   12257899999999986     4568899999999999999999999986432      


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        ......... ..........              ..+..+.+++.+||+.||++|||+.++++
T Consensus       239 --~~~~~~~~~-~~~~~~~~~~--------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          239 --PMRALFLIP-RNPAPRLKSK--------------KWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             --HHHHHHHHH-HSCCCCCSCS--------------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             --HHHHHHHhh-cCccccCCcc--------------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence              111111111 1111111110              11234789999999999999999999986

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.9e-36  Score=273.80  Aligned_cols=193  Identities=19%  Similarity=0.310  Sum_probs=148.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|+.||+|++...                                           
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            5677778899999999999998  7899999998532                                           


Q ss_pred             -CCC-------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -FPF-------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -~~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                       +|.                   +.....++.||+.||.|||   +.+|+||||||+|||++.+|.+||+|||+++.+..
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence             111                   1456678999999999999   99999999999999999999999999999987654


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-cccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-SFKE  228 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  228 (284)
                      .....   ....||+.|+|||++.+..++.++|||||||++|||++|..||....    ................ .++ 
T Consensus       342 ~~~~~---~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~----~~~~~~~~~~~i~~~~~~~p-  413 (543)
T 3c4z_A          342 GQTKT---KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG----EKVENKELKQRVLEQAVTYP-  413 (543)
T ss_dssp             TCCCB---CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT----CCCCHHHHHHHHHHCCCCCC-
T ss_pred             CCccc---ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc----cchhHHHHHHHHhhcccCCC-
Confidence            43221   22579999999999999999999999999999999999999997542    1111222222221110 010 


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCH-----HHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI-----VQVAK  275 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~ev~~  275 (284)
                                       ...+..+.+|+.+||+.||++||++     .+|++
T Consensus       414 -----------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          414 -----------------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             -----------------TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             -----------------cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence                             1122347899999999999999975     56653

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.2e-36  Score=255.14  Aligned_cols=193  Identities=19%  Similarity=0.205  Sum_probs=147.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .+.|...+.||+|+||.||+|..  ++..||+|++...                                         +
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            45688888999999999999999  6778999998643                                         1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE---ecCCcceeeccccccccCCCCc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |.               ......++.|++.||.|||   +.+|+|+||||+|||+   +.++.++|+|||++........
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~  164 (277)
T 3f3z_A           88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM  164 (277)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence            11               1567789999999999999   9999999999999999   7888999999999987654432


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .    ....||+.|+|||++.+. ++.++||||||+++|+|++|..||....        ......... .+.....   
T Consensus       165 ~----~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~---  227 (277)
T 3f3z_A          165 M----RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT--------DSEVMLKIR-EGTFTFP---  227 (277)
T ss_dssp             B----CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCCCCC---
T ss_pred             h----hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-hCCCCCC---
Confidence            2    125689999999988654 8999999999999999999999986432        111111111 1110000   


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               .......+..+.+++.+||+.||++|||+.++++
T Consensus       228 ---------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          228 ---------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             ---------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ---------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                     0000122345889999999999999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=6.7e-36  Score=252.27  Aligned_cols=188  Identities=21%  Similarity=0.304  Sum_probs=142.0

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||+||+|.+  ++..||+|++...                                             
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            44456899999999999998  7788999988643                                             


Q ss_pred             --CCCc---------------hhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEe-cCCcceeeccccccccCC
Q 039895           90 --FPFS---------------VSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQ-EENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 --~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~Dfg~a~~~~~  149 (284)
                        +|..               .....++.||+.||.|||   +.+  |+|+||||+|||++ .++.+||+|||++.....
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~  184 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence              1100               456789999999999999   888  99999999999997 789999999999976544


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....     ...||+.|+|||++. ..++.++|||||||++|+|++|..||....       .......... .+.....
T Consensus       185 ~~~~-----~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-------~~~~~~~~~~-~~~~~~~  250 (290)
T 1t4h_A          185 SFAK-----AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRRVT-SGVKPAS  250 (290)
T ss_dssp             TSBE-----ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHHHT-TTCCCGG
T ss_pred             cccc-----cccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-------cHHHHHHHHh-ccCCccc
Confidence            3222     156899999999876 458999999999999999999999986432       1111111111 1111111


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .              ....++.+.+++.+||+.||++|||+.|+++
T Consensus       251 ~--------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          251 F--------------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             G--------------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             c--------------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            1              1111234789999999999999999999986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=6.2e-36  Score=254.01  Aligned_cols=192  Identities=23%  Similarity=0.323  Sum_probs=149.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      +.|...+.||+|+||.||+|..  +++.||+|++...                                          +
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            4577788999999999999998  7899999998643                                          1


Q ss_pred             CC--------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccC
Q 039895           91 PF--------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND  156 (284)
Q Consensus        91 ~~--------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  156 (284)
                      |.              ......++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++..........  
T Consensus       102 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--  176 (303)
T 3a7i_A          102 LGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--  176 (303)
T ss_dssp             CTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB--
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccccc--
Confidence            11              1567789999999999999   8999999999999999999999999999997765433211  


Q ss_pred             CCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                       ....||+.|+|||++.+..++.++||||||+++|+|++|..||....        ....... .......     .+. 
T Consensus       177 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~-~~~~~~~-----~~~-  240 (303)
T 3a7i_A          177 -NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH--------PMKVLFL-IPKNNPP-----TLE-  240 (303)
T ss_dssp             -CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHH-HHHSCCC-----CCC-
T ss_pred             -CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC--------HHHHHHH-hhcCCCC-----CCc-
Confidence             22578999999999999999999999999999999999999986432        1111111 1111111     010 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                               ...+..+.+|+.+||+.||++|||+.++++.
T Consensus       241 ---------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          241 ---------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             ---------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ---------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                     0112337899999999999999999999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.9e-36  Score=259.99  Aligned_cols=198  Identities=21%  Similarity=0.274  Sum_probs=150.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcc--eEEEeecCC-----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRP--ISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~--vavK~~~~~-----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  ++..  ||+|.+...                                         
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            5677888999999999999998  5654  499988642                                         


Q ss_pred             --CC-------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 --FP-------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 --~~-------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                        +|                               ....++.++.||+.||.|||   +.+|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence              11                               11345679999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQD  215 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~  215 (284)
                      ||+|||++.......    ......+++.|+|||++.+..++.++|||||||++|+|++ |..||....        ...
T Consensus       182 kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~  249 (327)
T 1fvr_A          182 KIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAE  249 (327)
T ss_dssp             EECCTTCEESSCEEC----CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHH
T ss_pred             EEcccCcCccccccc----cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc--------HHH
Confidence            999999987443211    1112456889999999988889999999999999999998 999986432        112


Q ss_pred             HHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ..... ..+..     ..          .+...+..+.+|+.+||+.||++|||+.|+++.|+++.++
T Consensus       250 ~~~~~-~~~~~-----~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          250 LYEKL-PQGYR-----LE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             HHHHG-GGTCC-----CC----------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHh-hcCCC-----CC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            22111 11100     00          0112233488999999999999999999999999998764

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.6e-36  Score=257.92  Aligned_cols=193  Identities=21%  Similarity=0.274  Sum_probs=148.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .+.|...+.||+|+||.||++..  +|+.||+|++...                                         +
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            35677888999999999999998  7899999998643                                         1


Q ss_pred             CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEE---ecCCcceeeccccccccCCCCc
Q 039895           91 PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl---~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |.               ......++.|++.||.|||   +.+|+|+||||+|||+   +.++.++|+|||++........
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  164 (304)
T 2jam_A           88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM  164 (304)
T ss_dssp             CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred             CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence            11               1456779999999999999   8999999999999999   7788999999999876543221


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                           ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ......... .+... ... 
T Consensus       165 -----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~-~~~~~-~~~-  228 (304)
T 2jam_A          165 -----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--------ESKLFEKIK-EGYYE-FES-  228 (304)
T ss_dssp             -----HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHH-HCCCC-CCT-
T ss_pred             -----ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-cCCCC-CCc-
Confidence                 11468999999999999999999999999999999999999986432        111111111 11100 000 


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                +.....+..+.+++.+||+.||++|||+.|+++
T Consensus       229 ----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          229 ----------PFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             ----------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ----------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                      001122344789999999999999999999986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=3.8e-36  Score=260.84  Aligned_cols=207  Identities=18%  Similarity=0.229  Sum_probs=145.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF------------------------------------------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------------------------------------------   90 (284)
                      ++|...+.||+|+||.||+|..  +|+.||||++....                                          
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            5678888999999999999998  78999999986430                                          


Q ss_pred             -------C------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           91 -------P------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 -------~------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                             +            .......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.......
T Consensus       104 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  180 (353)
T 3coi_A          104 FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM  180 (353)
T ss_dssp             CEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred             EEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCc
Confidence                   0            11456789999999999999   8999999999999999999999999999997654322


Q ss_pred             ccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--c-c
Q 039895          152 THINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--F-K  227 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~  227 (284)
                      .      ...||+.|+|||++.+ ..++.++|||||||++|+|++|..||....     .......+........  + .
T Consensus       181 ~------~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~  249 (353)
T 3coi_A          181 T------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQLTQILKVTGVPGTEFVQ  249 (353)
T ss_dssp             ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC-----HHHHHHHHHHHHCBCCHHHHT
T ss_pred             c------ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCHHHHH
Confidence            1      2578999999999876 678999999999999999999999997532     1111111111100000  0 0


Q ss_pred             cccc-------ccccCCCCCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          228 EIVD-------PAIVGEEGLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       228 ~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+.+       ..+.......+ .........+.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0000       00000000000 011123445889999999999999999999975

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=9.7e-37  Score=262.32  Aligned_cols=210  Identities=20%  Similarity=0.312  Sum_probs=144.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|..  +|+.||||++...                                           
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            5677788999999999999999  6899999988543                                           


Q ss_pred             CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|.               ......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++..........
T Consensus       105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  181 (331)
T 4aaa_A          105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY  181 (331)
T ss_dssp             CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred             cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcccc
Confidence            111               1456789999999999999   8999999999999999999999999999997765432221


Q ss_pred             cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH-----------hh
Q 039895          155 NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY-----------IE  222 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~  222 (284)
                         ....||+.|+|||++.+. .++.++|||||||++|+|++|..||....    ....+.......           ..
T Consensus       182 ---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T 4aaa_A          182 ---DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS----DIDQLYHIMMCLGNLIPRHQELFNK  254 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             ---CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHHHhCCCChhhhhHhhh
Confidence               125689999999998775 68999999999999999999999986532    111111111000           00


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...+.....+.+.... .........+..+.+|+.+||+.||++|||+.|+++
T Consensus       255 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          255 NPVFAGVRLPEIKERE-PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CGGGTTCCCCCCSSCC-CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccccccccCccccccc-hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0001111111110000 000001123456889999999999999999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.2e-36  Score=254.22  Aligned_cols=199  Identities=21%  Similarity=0.297  Sum_probs=148.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|+.||+|++...                                           
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            4577788999999999999999  6899999988643                                           


Q ss_pred             ----CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC----cceeeccccccc
Q 039895           90 ----FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN----VAQLFDFTLSLS  146 (284)
Q Consensus        90 ----~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~Dfg~a~~  146 (284)
                          +|.               ......++.|++.||.|||   +.+|+|+||||+||+++.++    .+||+|||++..
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence                111               1567789999999999999   89999999999999998877    799999999987


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      .......    ....||+.|+|||++.+..++.++||||||+++|+|++|..||....        ......... ....
T Consensus       162 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~  228 (283)
T 3bhy_A          162 IEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--------KQETLTNIS-AVNY  228 (283)
T ss_dssp             CC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH-TTCC
T ss_pred             ccCCCcc----cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--------hHHHHHHhH-hccc
Confidence            6543221    12568999999999998899999999999999999999999986432        111111111 1100


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH--HHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK--QLRQIY  281 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~--~L~~l~  281 (284)
                      .  .+.          ......+..+.+++.+||+.||++|||+.|+++  .++.+.
T Consensus       229 ~--~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          229 D--FDE----------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             C--CCH----------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             C--Ccc----------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            0  000          001122344789999999999999999999986  345443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=7.9e-36  Score=251.12  Aligned_cols=188  Identities=23%  Similarity=0.302  Sum_probs=147.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  ++..||+|++...                                           
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            6788889999999999999999  6788999998432                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ......++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++........ 
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  169 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-  169 (284)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB-
T ss_pred             EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccccc-
Confidence             111               1456789999999999999   99999999999999999999999999999876543221 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                          ....|++.|+|||++.+..++.++||||||+++|+|++|..||....        ......... ....      .
T Consensus       170 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~-~~~~------~  230 (284)
T 2vgo_A          170 ----RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--------HTETHRRIV-NVDL------K  230 (284)
T ss_dssp             ----CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH-TTCC------C
T ss_pred             ----ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC--------HhHHHHHHh-cccc------C
Confidence                12578999999999999899999999999999999999999986432        111111111 1110      0


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +          +......+.+++.+||+.||++|||+.++++
T Consensus       231 ~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          231 F----------PPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             C----------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             C----------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            0          0111234789999999999999999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2e-36  Score=259.78  Aligned_cols=196  Identities=23%  Similarity=0.290  Sum_probs=128.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||||++...                                          
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            36788889999999999999999  6899999998654                                          


Q ss_pred             -CCC-------------------chhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 -FPF-------------------SVSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 -~~~-------------------~~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                       +|.                   ......++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||++....
T Consensus       101 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             eecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence             111                   1345689999999999999   87 99999999999999999999999999997765


Q ss_pred             CCCccccCCCCcccCccccccccc----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYR----TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE  224 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
                      .....    ....||+.|+|||++    .+..++.++|||||||++|+|++|..||......       .....      
T Consensus       178 ~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~------  240 (327)
T 3aln_A          178 DSIAK----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLT------  240 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------C------
T ss_pred             ccccc----ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHH------
Confidence            43221    114689999999998    4566899999999999999999999998643200       00000      


Q ss_pred             cccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          225 SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .......+.+...      ........+.+|+.+||+.||++|||+.++++
T Consensus       241 ~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          241 QVVKGDPPQLSNS------EEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCSCCCCCCCC------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHhcCCCCCCCCc------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            0000000001000      01112334889999999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=2e-36  Score=273.77  Aligned_cols=193  Identities=22%  Similarity=0.267  Sum_probs=143.3

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||+||+|..  ++..||+|++...                                          
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            34577788999999999999999  7889999998643                                          


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC---CcceeeccccccccCCC
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE---NVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~Dfg~a~~~~~~  150 (284)
                       +|..               .....++.||+.||.|||   +.+|+||||||+|||++..   +.+||+|||++......
T Consensus       116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~  192 (494)
T 3lij_A          116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ  192 (494)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence             2211               456789999999999999   8999999999999999764   45999999999876543


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ...    ....||+.|+|||++. ..++.++||||+||++|+|++|..||....        ......... .+.... .
T Consensus       193 ~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~-~~~~~~-~  257 (494)
T 3lij_A          193 KKM----KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT--------DQEILRKVE-KGKYTF-D  257 (494)
T ss_dssp             BCB----CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HTCCCC-C
T ss_pred             ccc----cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hCCCCC-C
Confidence            321    2257999999999886 569999999999999999999999996532        112222211 111100 0


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 .+.....+..+.+|+.+||+.||.+|||+.|+++
T Consensus       258 -----------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          258 -----------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             -----------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence                       0111122344789999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2.6e-36  Score=261.58  Aligned_cols=214  Identities=19%  Similarity=0.167  Sum_probs=148.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||||++...                                          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46788889999999999999998  6899999998643                                          


Q ss_pred             -----CC-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 -----FP-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 -----~~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                           +|             .......++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.......
T Consensus        90 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (353)
T 2b9h_A           90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA  166 (353)
T ss_dssp             EEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence                 00             01456789999999999999   8999999999999999999999999999998765332


Q ss_pred             cccc-------CCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc
Q 039895          152 THIN-------DSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN  223 (284)
Q Consensus       152 ~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (284)
                      ....       ......||+.|+|||++.. ..++.++|||||||++|+|++|..||....     .......+......
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~  241 (353)
T 2b9h_A          167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD-----YRHQLLLIFGIIGT  241 (353)
T ss_dssp             -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCC
T ss_pred             ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHHHhCC
Confidence            1111       1122578999999998754 678999999999999999999999986532     11111111111110


Q ss_pred             Ccccc----cccc-------cccCCCCCC-ChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          224 ESFKE----IVDP-------AIVGEEGLM-WPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       224 ~~~~~----~~~~-------~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .....    ....       .+....... .......+..+.+|+.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00000    0000       000000000 0001123445789999999999999999999986

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.5e-36  Score=259.25  Aligned_cols=206  Identities=19%  Similarity=0.241  Sum_probs=141.5

Q ss_pred             cCCCC-CCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           55 DDFDG-GKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        55 ~~f~~-~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      +.|.. .++||+|+||+||+|..  +++.||||++...                                          
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            34544 47899999999999998  7899999998643                                          


Q ss_pred             CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc---ceeeccccccccCCCC
Q 039895           90 FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~Dfg~a~~~~~~~  151 (284)
                      +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.   +||+|||++.......
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  168 (316)
T 2ac3_A           92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG  168 (316)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred             cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence            121               1456779999999999999   899999999999999998776   8999999987664321


Q ss_pred             cc----ccCCCCcccCccccccccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc------cHHHH
Q 039895          152 TH----INDSNRVIGTFGFMAPEYRTT-----GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY------RLQDL  216 (284)
Q Consensus       152 ~~----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~------~~~~~  216 (284)
                      ..    ........||+.|+|||++..     ..++.++|||||||++|||++|..||......+....      .....
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  248 (316)
T 2ac3_A          169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM  248 (316)
T ss_dssp             -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred             ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence            11    111122468999999999865     4588999999999999999999999976432111000      00011


Q ss_pred             HHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .......+... ..           .......+..+.+|+.+||+.||++|||+.|+++
T Consensus       249 ~~~~i~~~~~~-~~-----------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          249 LFESIQEGKYE-FP-----------DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHHHHCCCC-CC-----------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHhccCcc-cC-----------chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            11111111100 00           0001122345889999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.3e-36  Score=262.80  Aligned_cols=141  Identities=22%  Similarity=0.299  Sum_probs=119.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|...+.||+|+||+||+|.+  ++..||+|++...                                          +
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            5678888999999999999999  6899999998643                                          1


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      |..               .....++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||++.......   
T Consensus       113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---  186 (360)
T 3eqc_A          113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---  186 (360)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---
Confidence            111               456689999999999999   75 89999999999999999999999999986553221   


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                        .....||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       187 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          187 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             ------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             --ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence              11257899999999999999999999999999999999999999753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.9e-36  Score=280.65  Aligned_cols=201  Identities=21%  Similarity=0.292  Sum_probs=150.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--C---CcceEEEeecCC---------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--Q---DRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~---------------------------------------   89 (284)
                      .+.|...+.||+|+||.||+|.+  .   +..||+|.+...                                       
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv  468 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII  468 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEE
Confidence            35566778899999999999998  2   346999987643                                       


Q ss_pred             --CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|.                ...++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++......
T Consensus       469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~  545 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  545 (656)
T ss_dssp             EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred             EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence              111                1456788999999999999   8999999999999999999999999999998775443


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ....  ....+|+.|+|||++.+..++.++|||||||++|||++ |..||....        .......... +....  
T Consensus       546 ~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--------~~~~~~~i~~-~~~~~--  612 (656)
T 2j0j_A          546 YYKA--SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--------NNDVIGRIEN-GERLP--  612 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHH-TCCCC--
T ss_pred             ceec--cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHc-CCCCC--
Confidence            2221  12457889999999988899999999999999999997 888886432        1112211111 11000  


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                   .+..++..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       613 -------------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          613 -------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             -------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence                         0112234588999999999999999999999999999764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.2e-35  Score=253.32  Aligned_cols=195  Identities=23%  Similarity=0.252  Sum_probs=144.9

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------CC
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------FP   91 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------~~   91 (284)
                      ..+.|...+.||+|+||.||+|..  +|+.||+|++...                                       +|
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC  106 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence            346788889999999999999999  6899999998654                                       11


Q ss_pred             C----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 F----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      .                ......++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++.........  
T Consensus       107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~--  181 (314)
T 3com_A          107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK--  181 (314)
T ss_dssp             TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC--
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc--
Confidence            1                1456789999999999999   999999999999999999999999999999776543221  


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                       .....||+.|+|||++.+..++.++||||||+++|+|++|..||....        ........... .....      
T Consensus       182 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~-~~~~~------  245 (314)
T 3com_A          182 -RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH--------PMRAIFMIPTN-PPPTF------  245 (314)
T ss_dssp             -BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHS-CCCCC------
T ss_pred             -cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcC-CCccc------
Confidence             122578999999999998899999999999999999999999986432        11111111111 10000      


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                             ......+..+.+++.+||+.||++|||+.++++
T Consensus       246 -------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          246 -------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             -------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                   001112334789999999999999999999975

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.1e-36  Score=255.58  Aligned_cols=194  Identities=21%  Similarity=0.274  Sum_probs=147.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||++..  +|+.||+|++...                                          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35677888999999999999999  7899999998643                                          


Q ss_pred             ---CC-------------------CchhHHHHHHHHHHHHHHhccCCCCC-----eeecccccCcEEEecCCcceeeccc
Q 039895           90 ---FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRP-----VVSRDIKPTTIVLQEENVAQLFDFT  142 (284)
Q Consensus        90 ---~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~-----ivHrDlkp~NILl~~~~~~kl~Dfg  142 (284)
                         +|                   .......++.|++.||.|||   +.+     |+|+||||+|||++.++.+||+|||
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence               11                   11456789999999999999   777     9999999999999999999999999


Q ss_pred             cccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          143 LSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       143 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      ++...........   ...||+.|+|||++.+..++.++||||||+++|+|++|..||....        ....... ..
T Consensus       162 ~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~-i~  229 (279)
T 2w5a_A          162 LARILNHDTSFAK---TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--------QKELAGK-IR  229 (279)
T ss_dssp             HHHHC---CHHHH---HHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH-HH
T ss_pred             hheeecccccccc---ccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--------HHHHHHH-Hh
Confidence            9987654322111   1468999999999998899999999999999999999999986432        1111111 11


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL  277 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L  277 (284)
                      .+....+               +...+..+.+++.+||+.||++|||+.||++.+
T Consensus       230 ~~~~~~~---------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          230 EGKFRRI---------------PYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             HTCCCCC---------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             hcccccC---------------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            1111111               011223478999999999999999999998754

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.8e-36  Score=258.97  Aligned_cols=201  Identities=20%  Similarity=0.269  Sum_probs=147.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~-------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|.+       ++..||||++...                                     
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            36788889999999999999984       5668999998543                                     


Q ss_pred             -----CCC----------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceee
Q 039895           90 -----FPF----------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLF  139 (284)
Q Consensus        90 -----~~~----------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~  139 (284)
                           +|.                      ...++.++.|++.||.|||   +.+|+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence                 111                      1346789999999999999   899999999999999984   4469999


Q ss_pred             ccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHH
Q 039895          140 DFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       140 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      |||++.......... ......||+.|+|||++.+..++.++|||||||++|+|++ |..||....        ......
T Consensus       186 Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~~~~  256 (327)
T 2yfx_A          186 DFGMARDIYRASYYR-KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQEVLE  256 (327)
T ss_dssp             CCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHH
T ss_pred             ccccccccccccccc-cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--------HHHHHH
Confidence            999997654332211 1122567899999999988899999999999999999998 888875432        111111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .. ........               ....+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       257 ~~-~~~~~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          257 FV-TSGGRMDP---------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HH-HTTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-hcCCCCCC---------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            11 11111000               11122347899999999999999999999999998864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.3e-36  Score=254.30  Aligned_cols=186  Identities=16%  Similarity=0.204  Sum_probs=142.6

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||+||+|..  +++.||+|++...                                         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            346788889999999999999999  7999999998753                                         


Q ss_pred             ---CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC--------------
Q 039895           90 ---FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE--------------  133 (284)
Q Consensus        90 ---~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~--------------  133 (284)
                         +|                   .......++.||+.||.|||   +.+|+||||||+|||++.+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence               11                   11456789999999999999   8999999999999999844              


Q ss_pred             -----CcceeeccccccccCCCCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 039895          134 -----NVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDD  207 (284)
Q Consensus       134 -----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~  207 (284)
                           ..+||+|||++........       ..||+.|+|||++.+. .++.++|||||||++|+|++|.+++....   
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~-------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---  235 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQV-------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---  235 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCC-------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---
T ss_pred             ccCCceEEEEcccccccccCCccc-------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---
Confidence                 4789999999987654322       4589999999998766 56689999999999999999987764211   


Q ss_pred             CccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          208 GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           ...    ....+.....               +...+..+.+++.+||+.||++|||+.|+++
T Consensus       236 -----~~~----~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          236 -----QWH----EIRQGRLPRI---------------PQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             -----HHH----HHHTTCCCCC---------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----HHH----HHHcCCCCCC---------------CcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence                 111    1111111111               0112234789999999999999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=7.3e-36  Score=250.06  Aligned_cols=196  Identities=21%  Similarity=0.281  Sum_probs=148.1

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +++.||+|++...                                          
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            46688889999999999999998  7899999998533                                          


Q ss_pred             CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|.               ......++.|++.||.|||   +.+|+|+||||+||+++.++.+||+|||++..........
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            111               1567889999999999999   8999999999999999999999999999997654322111


Q ss_pred             cCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                       ......||+.|+|||++.+..+ +.++||||||+++|+|++|..||.....   .......+    .......      
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~----~~~~~~~------  228 (276)
T 2yex_A          163 -LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD---SCQEYSDW----KEKKTYL------  228 (276)
T ss_dssp             -CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT---TSHHHHHH----HTTCTTS------
T ss_pred             -cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHh----hhccccc------
Confidence             1122578999999999987765 6789999999999999999999965331   11111111    1110000      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               +........+.+++.+||+.||++|||+.|+++
T Consensus       229 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          229 ---------NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             ---------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                     001122334789999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=250.27  Aligned_cols=193  Identities=21%  Similarity=0.313  Sum_probs=142.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      +.|....+||+|+||.||+|..  ++..||+|++...                                         +|
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            3455566999999999999998  7889999998643                                         11


Q ss_pred             C------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-CCcceeeccccccccCCCCc
Q 039895           92 F------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-ENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        92 ~------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      .                  ......++.|++.||.|||   +.+|+|+||||+||+++. ++.+||+|||++........
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence            1                  1345568999999999999   899999999999999997 89999999999987654321


Q ss_pred             cccCCCCcccCccccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .   .....||+.|+|||++.+..  ++.++||||||+++|+|++|..||....      ............ ..     
T Consensus       179 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~-~~-----  243 (295)
T 2clq_A          179 C---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG------EPQAAMFKVGMF-KV-----  243 (295)
T ss_dssp             -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGS------SHHHHHHHHHHH-CC-----
T ss_pred             c---ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCC------chhHHHHhhccc-cc-----
Confidence            1   12257899999999987653  7899999999999999999999986422      111111111000 00     


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .+.+          +...+..+.+++.+||+.||++|||+.++++
T Consensus       244 ~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          244 HPEI----------PESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CCCC----------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cccc----------cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0000          1112234789999999999999999999975

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=259.05  Aligned_cols=196  Identities=22%  Similarity=0.326  Sum_probs=134.1

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      ...++|...+.||+|+||.||+|.+  +|+.||||++...                                        
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l  101 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI  101 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence            3456788888999999999999999  7899999998654                                        


Q ss_pred             ---CCC---------------chhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ---FPF---------------SVSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ---~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                         +|.               ......++.|++.||.|||   +. +|+|+||||+|||++.++.+||+|||++......
T Consensus       102 v~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          102 AMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             EECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             EEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence               111               1456689999999999999   75 9999999999999999999999999998766443


Q ss_pred             CccccCCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      ...    ....||+.|+|||++.     ...++.++|||||||++|+|++|..||....      . ............ 
T Consensus       179 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~-~~~~~~~~~~~~-  246 (318)
T 2dyl_A          179 KAK----DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK------T-DFEVLTKVLQEE-  246 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC------S-HHHHHHHHHHSC-
T ss_pred             ccc----cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC------c-cHHHHHHHhccC-
Confidence            221    1256899999999984     4568899999999999999999999986422      1 111122221111 


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....             +.....+..+.+++.+||+.||.+|||+.++++
T Consensus       247 ~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 PPLL-------------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCCC-------------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCC-------------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            0000             000112234789999999999999999999986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.6e-35  Score=250.26  Aligned_cols=195  Identities=17%  Similarity=0.177  Sum_probs=147.9

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||++..  ++..||+|++...                                         
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            347899999999999999999998  7889999998532                                         


Q ss_pred             ------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 ------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 ------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                            +|..                .....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           83 MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             EEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence                  1110                456789999999999999   899999999999999999999999999999876


Q ss_pred             CCCCccccCCCCcccCccccccccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          148 PEGETHINDSNRVIGTFGFMAPEYRTTGD--FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      ........ .....||+.|+|||++.+..  ++.++||||||+++|+|++|..||....        ......... ...
T Consensus       160 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~-~~~  229 (305)
T 2wtk_C          160 HPFAADDT-CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIG-KGS  229 (305)
T ss_dssp             CTTCSSCE-ECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHH-HCC
T ss_pred             Cccccccc-cccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHh-cCC
Confidence            53221111 11256899999999987643  4789999999999999999999986432        122221111 111


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ..      +          +......+.+++.+||+.||++|||+.|+++.
T Consensus       230 ~~------~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          230 YA------I----------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             CC------C----------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             CC------C----------CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            10      0          01122347899999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.6e-36  Score=258.88  Aligned_cols=209  Identities=17%  Similarity=0.191  Sum_probs=145.0

Q ss_pred             CcceecHHHHHHHhcCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCCCC----------------------------
Q 039895           41 PIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDTFP----------------------------   91 (284)
Q Consensus        41 ~~~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~----------------------------   91 (284)
                      +.+.+.+..+....+.|...+.||+|+||.||++.. +++.||||++.....                            
T Consensus        14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   93 (313)
T 3cek_A           14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   93 (313)
T ss_dssp             ------CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCE
T ss_pred             CCCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEE
Confidence            334444444444557788889999999999999998 788999999854300                            


Q ss_pred             -------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeec
Q 039895           92 -------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        92 -------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                                                     ....+..++.|++.||.|||   +.+|+||||||+|||++ ++.+||+|
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~D  169 (313)
T 3cek_A           94 YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLID  169 (313)
T ss_dssp             EEEEECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECC
T ss_pred             EEEeecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEee
Confidence                                           01467789999999999999   89999999999999996 48899999


Q ss_pred             cccccccCCCCccccCCCCcccCccccccccccC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 039895          141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT-----------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE  209 (284)
Q Consensus       141 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~  209 (284)
                      ||++........... .....||+.|+|||++.+           ..++.++|||||||++|+|++|..||....     
T Consensus       170 fg~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----  243 (313)
T 3cek_A          170 FGIANQMQPDTTSVV-KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----  243 (313)
T ss_dssp             CSSSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----
T ss_pred             ccccccccCcccccc-ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-----
Confidence            999987654322111 112568999999999865           468889999999999999999999986432     


Q ss_pred             cccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          210 DYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                       . ................     .          +......+.+++.+||+.||++|||+.|+++.
T Consensus       244 -~-~~~~~~~~~~~~~~~~-----~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          244 -N-QISKLHAIIDPNHEIE-----F----------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             -S-HHHHHHHHHCTTSCCC-----C----------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -H-HHHHHHHHHhcccccC-----C----------cccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence             1 1111111111110000     0          00112347899999999999999999999863

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.4e-35  Score=254.29  Aligned_cols=212  Identities=19%  Similarity=0.238  Sum_probs=151.1

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe---CCcceEEEeecCC---------------------------------C-----
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL---QDRPISVMKFEDT---------------------------------F-----   90 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~---------------------------------~-----   90 (284)
                      .+.+.|...+.||+|+||.||+|..   +|+.||+|++...                                 +     
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3557888899999999999999997   5788999987532                                 0     


Q ss_pred             -----------------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecc
Q 039895           91 -----------------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF  141 (284)
Q Consensus        91 -----------------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Df  141 (284)
                                                   .....+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence                                         011456789999999999999   899999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh
Q 039895          142 TLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI  221 (284)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  221 (284)
                      |++........    .....||+.|+|||++.+..++.++|||||||++|+|++|..||....     .......+....
T Consensus       165 g~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~  235 (326)
T 1blx_A          165 GLARIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-----DVDQLGKILDVI  235 (326)
T ss_dssp             CSCCCCCGGGG----GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHH
T ss_pred             cccccccCCCC----ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHHHc
Confidence            99976643221    122578999999999998899999999999999999999999986432     111111111111


Q ss_pred             hcC---ccccccc-c--cccCCC-CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          222 ENE---SFKEIVD-P--AIVGEE-GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       222 ~~~---~~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...   .+..... +  ...... .............+.+|+.+||+.||++|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            110   1110000 0  000000 0000001123345789999999999999999999985

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1e-35  Score=251.63  Aligned_cols=191  Identities=21%  Similarity=0.269  Sum_probs=148.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||.||++..  +++.||+|++...                                           
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            5677788999999999999999  6889999987543                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ...+..++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++.........
T Consensus        95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  171 (294)
T 2rku_A           95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER  171 (294)
T ss_dssp             ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence             111               1567789999999999999   899999999999999999999999999999876433221


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .....||+.|+|||++.+..++.++||||||+++|+|++|..||....        .......... ....      
T Consensus       172 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~------  233 (294)
T 2rku_A          172 ---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKK-NEYS------  233 (294)
T ss_dssp             ---BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHT-TCCC------
T ss_pred             ---cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhh-ccCC------
Confidence               122568999999999998889999999999999999999999986432        1111111111 1100      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      +          +......+.+++.+||+.||++|||+.|+++.
T Consensus       234 ~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          234 I----------PKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             C----------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             C----------ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            0          01112347899999999999999999999863

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=3.5e-36  Score=257.79  Aligned_cols=195  Identities=19%  Similarity=0.231  Sum_probs=146.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +++.||||++...                                          
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            35688889999999999999998  7889999987532                                          


Q ss_pred             ------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc---ceeecccccc
Q 039895           90 ------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFTLSL  145 (284)
Q Consensus        90 ------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~Dfg~a~  145 (284)
                            +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.   +||+|||++.
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence                  110               1456789999999999999   899999999999999987664   9999999998


Q ss_pred             ccCCCCccccCCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          146 SIPEGETHINDSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      .........    ...||+.|+|||++.   ...++.++|||||||++|+|++|..||....    ....+...+..   
T Consensus       166 ~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~---  234 (322)
T 2ycf_A          166 ILGETSLMR----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQITS---  234 (322)
T ss_dssp             ECCCCHHHH----HHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT----CSSCHHHHHHH---
T ss_pred             ecccccccc----cccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc----hHHHHHHHHHh---
Confidence            765432211    146899999999863   5678999999999999999999999986533    11122222211   


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       +....  .+          ......+..+.+++.+||+.||++|||+.++++
T Consensus       235 -~~~~~--~~----------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          235 -GKYNF--IP----------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             -TCCCC--CH----------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -Ccccc--Cc----------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence             11000  00          001122345789999999999999999999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.9e-36  Score=271.93  Aligned_cols=194  Identities=22%  Similarity=0.255  Sum_probs=146.5

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..+.|...+.||+|+||+||+|..  ++..||+|++...                                         
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            456788889999999999999998  7889999998532                                         


Q ss_pred             -------------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC---ccee
Q 039895           90 -------------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN---VAQL  138 (284)
Q Consensus        90 -------------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~---~~kl  138 (284)
                                   +|..               .....++.||+.||.|||   +.+|+||||||+|||++.++   .+||
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl  190 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI  190 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEE
Confidence                         2211               456789999999999999   89999999999999998776   6899


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      +|||++.........    ....||+.|+|||++. ..++.++||||+||++|+|++|..||....        ......
T Consensus       191 ~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~  257 (504)
T 3q5i_A          191 VDFGLSSFFSKDYKL----RDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN--------DQDIIK  257 (504)
T ss_dssp             CCCTTCEECCTTSCB----CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred             EECCCCEEcCCCCcc----ccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH
Confidence            999999877543322    1257999999999986 468999999999999999999999997532        112222


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ... .+....            ..+.....+..+.+|+.+||+.||.+|||+.|+++
T Consensus       258 ~i~-~~~~~~------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          258 KVE-KGKYYF------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHH-HCCCCC------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHH-cCCCCC------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            211 111100            00111122345889999999999999999999975

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.9e-36  Score=258.20  Aligned_cols=185  Identities=21%  Similarity=0.328  Sum_probs=145.2

Q ss_pred             HHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------
Q 039895           52 TATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        52 ~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------   89 (284)
                      ...+.|...+.||+|+||.||+|..  +++.||||++...                                        
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            3456788889999999999999998  8899999987532                                        


Q ss_pred             ---------CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-cCCcceeecccc
Q 039895           90 ---------FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQLFDFTL  143 (284)
Q Consensus        90 ---------~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~Dfg~  143 (284)
                               ++.                ......++.||+.||.|||   +.+|+||||||+|||++ .++.+||+|||+
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~  196 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS  196 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence                     111                0456679999999999999   99999999999999999 789999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      +.........     ...||+.|+|||++.+..+ +.++|||||||++|||++|..||....          ..    ..
T Consensus       197 ~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~~----~~  257 (320)
T 3a99_A          197 GALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------EI----IR  257 (320)
T ss_dssp             CEECCSSCBC-----CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------HH----HH
T ss_pred             cccccccccc-----CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------hh----hc
Confidence            9876543221     2568999999999877665 688999999999999999999985311          00    00


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                       ...  ...              ...+..+.+|+.+||+.||++|||+.|+++
T Consensus       258 -~~~--~~~--------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          258 -GQV--FFR--------------QRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             -CCC--CCS--------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -ccc--ccc--------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             000  000              011234789999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=9.6e-36  Score=256.56  Aligned_cols=190  Identities=22%  Similarity=0.269  Sum_probs=148.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||.||++..  +++.||+|++...                                           
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            5677788999999999999999  6789999998543                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ......++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++.........
T Consensus       121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  197 (335)
T 2owb_A          121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER  197 (335)
T ss_dssp             CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCccc
Confidence             111               1567789999999999999   899999999999999999999999999999876533221


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                         .....||+.|+|||++.+..++.++||||||+++|+|++|..||....        .......... ....      
T Consensus       198 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~-~~~~------  259 (335)
T 2owb_A          198 ---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKK-NEYS------  259 (335)
T ss_dssp             ---BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHH-TCCC------
T ss_pred             ---ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHhc-CCCC------
Confidence               122578999999999998889999999999999999999999986432        1111111111 1100      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +          +......+.+|+.+||+.||++|||+.|+++
T Consensus       260 ~----------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          260 I----------PKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             C----------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             C----------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0          0011234789999999999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.6e-36  Score=266.79  Aligned_cols=196  Identities=22%  Similarity=0.320  Sum_probs=137.4

Q ss_pred             cCCCCCCeeeecCCce-EEEEEeCCcceEEEeecCC---------------------------------------CCCc-
Q 039895           55 DDFDGGKVIMKCLFYK-LYKGFLQDRPISVMKFEDT---------------------------------------FPFS-   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~-Vy~~~~~~~~vavK~~~~~---------------------------------------~~~~-   93 (284)
                      .+|...++||+|+||+ ||++..+|+.||||++...                                       +|.. 
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~  103 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAAT  103 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCC
Confidence            4578888999999998 5555569999999998654                                       1111 


Q ss_pred             --------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CC--cceeeccccccccCCCCccc
Q 039895           94 --------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---EN--VAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        94 --------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~--~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                    ...+.++.||+.||.|||   +.+|+||||||+|||++.   ++  .+||+|||+++.........
T Consensus       104 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~  180 (432)
T 3p23_A          104 LQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF  180 (432)
T ss_dssp             HHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------
T ss_pred             HHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce
Confidence                          356789999999999999   899999999999999953   23  57799999998876543322


Q ss_pred             cCCCCcccCcccccccccc---CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRT---TGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .......||+.|+|||++.   ...++.++|||||||++|||++ |..||....      ...   ............ .
T Consensus       181 ~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~------~~~---~~~~~~~~~~~~-~  250 (432)
T 3p23_A          181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL------QRQ---ANILLGACSLDC-L  250 (432)
T ss_dssp             -----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT------THH---HHHHTTCCCCTT-S
T ss_pred             eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh------HHH---HHHHhccCCccc-c
Confidence            2233367999999999987   4567889999999999999999 777774321      111   111111111000 0


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  .........+.+|+.+||+.||++|||+.||++
T Consensus       251 ------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          251 ------------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ------------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence                        011233444789999999999999999999984

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=5.2e-36  Score=255.98  Aligned_cols=204  Identities=18%  Similarity=0.158  Sum_probs=148.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||++..  +|+.||||++...                                          
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            36788889999999999999997  8899999987432                                          


Q ss_pred             ---CC-------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           90 ---FP-------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        90 ---~~-------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                         +|                   ....++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence               11                   11456779999999999999   899999999999999999999999999988765


Q ss_pred             CCCCccc------cCCCCcccCccccccccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          148 PEGETHI------NDSNRVIGTFGFMAPEYRTTGD---FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       148 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      .......      .......||+.|+|||++....   ++.++|||||||++|+|++|..||.....   ..........
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~  261 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ---KGDSVALAVQ  261 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH---TTSCHHHHHH
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc---ccchhhHHhh
Confidence            3211100      0001135799999999987654   68999999999999999999999842110   0001111110


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                          . ...              .+.....+..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       262 ----~-~~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          262 ----N-QLS--------------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             ----C-C----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             ----c-cCC--------------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence                0 000              00011223348899999999999999999999999998754

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=4.8e-36  Score=267.10  Aligned_cols=195  Identities=23%  Similarity=0.290  Sum_probs=137.6

Q ss_pred             CCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCCc----
Q 039895           58 DGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPFS----   93 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~~----   93 (284)
                      ...++||+|+||+||.+.. +|+.||||++...                                       +|..    
T Consensus        18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~   97 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQD   97 (434)
T ss_dssp             EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHHH
T ss_pred             eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHHH
Confidence            3457899999999976544 9999999987544                                       2211    


Q ss_pred             -----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-------------Ccceeecccc
Q 039895           94 -----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-------------NVAQLFDFTL  143 (284)
Q Consensus        94 -----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~Dfg~  143 (284)
                                       ...+.++.||+.||.|||   +.+|+||||||+|||++.+             +.+||+|||+
T Consensus        98 ~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~  174 (434)
T 2rio_A           98 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL  174 (434)
T ss_dssp             HHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred             HHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence                             123569999999999999   8999999999999999764             4799999999


Q ss_pred             ccccCCCCcccc-CCCCcccCccccccccccC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHH
Q 039895          144 SLSIPEGETHIN-DSNRVIGTFGFMAPEYRTT-------GDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQ  214 (284)
Q Consensus       144 a~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~  214 (284)
                      ++.......... ......||+.|+|||++.+       ..++.++|||||||++|||++ |..||....      ....
T Consensus       175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~~~~  248 (434)
T 2rio_A          175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY------SRES  248 (434)
T ss_dssp             CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT------THHH
T ss_pred             ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch------hhHH
Confidence            988765432211 1223579999999999865       568999999999999999999 888885422      1111


Q ss_pred             HHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .....   .......           ........+..+.+|+.+||+.||++|||+.||++
T Consensus       249 ~i~~~---~~~~~~~-----------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          249 NIIRG---IFSLDEM-----------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHT---CCCCCCC-----------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHhcC---CCCcccc-----------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            11110   0000000           00112345667899999999999999999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=8e-36  Score=253.06  Aligned_cols=194  Identities=19%  Similarity=0.235  Sum_probs=143.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .+.|...+.||+|+||.||+|.+  ++..||+|++...                                         +
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            35677888999999999999999  6889999998643                                         1


Q ss_pred             CC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           91 PF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        91 ~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      |.                ......++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||++........  
T Consensus        98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--  172 (302)
T 2j7t_A           98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ--  172 (302)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH--
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc--
Confidence            11                1456789999999999999   89999999999999999999999999998754321111  


Q ss_pred             cCCCCcccCccccccccc-----cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          155 NDSNRVIGTFGFMAPEYR-----TTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                       ......||+.|+|||++     ....++.++||||||+++|+|++|..||....        ............ ....
T Consensus       173 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~-~~~~  242 (302)
T 2j7t_A          173 -KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSD-PPTL  242 (302)
T ss_dssp             -C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSC-CCCC
T ss_pred             -ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC--------HHHHHHHHhccC-Cccc
Confidence             11125689999999987     46678999999999999999999999986432        111111111111 1111


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .             .+...+..+.+++.+||+.||++|||+.++++
T Consensus       243 ~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          243 L-------------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             S-------------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             C-------------CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            0             01122334789999999999999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=9.6e-36  Score=252.11  Aligned_cols=195  Identities=19%  Similarity=0.275  Sum_probs=149.0

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|..  +|+.||||++...                                         
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            346788889999999999999999  7899999998521                                         


Q ss_pred             ----------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccc
Q 039895           90 ----------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus        90 ----------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                                +|.               ......++.||+.||.|||   +.+|+|+||||+||+++.++.+||+|||++
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccch
Confidence                      111               1466789999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCccccCCCCcccCcccccccccc------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHH
Q 039895          145 LSIPEGETHINDSNRVIGTFGFMAPEYRT------TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK  218 (284)
Q Consensus       145 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~  218 (284)
                      .........    ....||+.|+|||++.      ...++.++||||||+++|+|++|..||....        ......
T Consensus       172 ~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~  239 (298)
T 1phk_A          172 CQLDPGEKL----REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLMLR  239 (298)
T ss_dssp             EECCTTCCB----CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred             hhcCCCccc----ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--------HHHHHH
Confidence            876543322    1256899999999874      4568899999999999999999999986432        111111


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ... ...... .           .+.....+..+.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~-~~~~~~-~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          240 MIM-SGNYQF-G-----------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHH-HTCCCC-C-----------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHh-cCCccc-C-----------cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            111 111100 0           0111223345889999999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.5e-35  Score=246.86  Aligned_cols=190  Identities=25%  Similarity=0.319  Sum_probs=139.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|..  +|+.||||++...                                           
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            5677888999999999999998  7899999998532                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               ......++.|++.||.|||   +.+|+|+||||+||+++.++.++|+|||++.........
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  167 (276)
T 2h6d_A           91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  167 (276)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred             eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCcce
Confidence             111               1456789999999999999   899999999999999999999999999999876543321


Q ss_pred             ccCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                          ....||+.|+|||++.+..+ +.++||||||+++|+|++|..||....        ......... .....  .  
T Consensus       168 ----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~--~--  230 (276)
T 2h6d_A          168 ----RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--------VPTLFKKIR-GGVFY--I--  230 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCCC--C--
T ss_pred             ----ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHhh-cCccc--C--
Confidence                12568999999999987765 589999999999999999999986432        111111111 11100  0  


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                  +......+.+++.+||+.||++|||+.|+++.
T Consensus       231 ------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          231 ------------PEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             ------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ------------chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                        01112347899999999999999999999873

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.2e-36  Score=254.39  Aligned_cols=210  Identities=16%  Similarity=0.192  Sum_probs=140.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------CC-------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------FP-------------   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------~~-------------   91 (284)
                      +.|...+.||+|+||.||+|..  +|+.||+|++...                            ++             
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            5677788999999999999999  5899999987533                            00             


Q ss_pred             ---------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-cCCcceeecccc
Q 039895           92 ---------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQLFDFTL  143 (284)
Q Consensus        92 ---------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl~Dfg~  143 (284)
                                                 .......++.|++.||.|||   +.+|+||||||+|||++ .++.+||+|||+
T Consensus        91 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~  167 (320)
T 2i6l_A           91 LTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGL  167 (320)
T ss_dssp             CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccCcc
Confidence                                       01456789999999999999   89999999999999998 567999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      +.................+|+.|+|||++.. ..++.++|||||||++|||++|..||....     .   .........
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~---~~~~~~~~~  239 (320)
T 2i6l_A          168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH-----E---LEQMQLILE  239 (320)
T ss_dssp             CBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHHHHH
T ss_pred             ccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC-----H---HHHHHHHHH
Confidence            9876543222222223567999999998765 678999999999999999999999987532     1   111111111


Q ss_pred             cCc-------------ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 NES-------------FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ...             +......................+..+.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            000             00000000000000000001123445889999999999999999999986

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.3e-35  Score=251.68  Aligned_cols=205  Identities=20%  Similarity=0.270  Sum_probs=139.5

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..++|...+.||+|+||.||+|..  ++..||||++...                                         
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            347888899999999999999998  7899999987532                                         


Q ss_pred             -CC-----------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccc
Q 039895           90 -FP-----------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus        90 -~~-----------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                       +|                       ....+..++.||+.||.|||   +.+|+|+||||+||+++.++.+||+|||++.
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence             11                       11346679999999999999   8999999999999999999999999999997


Q ss_pred             ccCCCCcc--ccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          146 SIPEGETH--INDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       146 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      ........  ........||+.|+|||++.. ..++.++|||||||++|+|++|..||....     ......   ....
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~---~~~~  241 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-----PMKVLM---LTLQ  241 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC-----GGGHHH---HHHT
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc-----hhhHHH---HHhc
Confidence            76543211  111122578999999999865 468999999999999999999999986532     111111   1111


Q ss_pred             cCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          223 NESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      . .............      .....+..+.+++.+||+.||++|||+.++++
T Consensus       242 ~-~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          242 N-DPPSLETGVQDKE------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             S-SCCCTTC-----C------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             c-CCCccccccccch------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            1 1000000000000      00112234789999999999999999999986

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.9e-35  Score=249.25  Aligned_cols=194  Identities=23%  Similarity=0.292  Sum_probs=146.9

Q ss_pred             HhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           53 ATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        53 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      ..+.|...+.||+|+||.||+|..  +++.||+|++...                                         
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            346788889999999999999999  7899999998543                                         


Q ss_pred             --CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC---CcceeeccccccccCC
Q 039895           90 --FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE---NVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 --~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~---~~~kl~Dfg~a~~~~~  149 (284)
                        +|.               ......++.||+.||.|||   +.+|+|+||||+||+++.+   +.+||+|||++.....
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~  176 (287)
T 2wei_A          100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (287)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred             EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence              111               1556789999999999999   8999999999999999754   4699999999987654


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....    ....||+.|+|||++.+ .++.++||||||+++|+|++|..||....        ......... .+.....
T Consensus       177 ~~~~----~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~~  242 (287)
T 2wei_A          177 NTKM----KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVE-TGKYAFD  242 (287)
T ss_dssp             CSSC----SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCCCCC
T ss_pred             CCcc----ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-cCCCCCC
Confidence            3221    12468999999998865 48999999999999999999999986532        111121111 1111100


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  .+.....+..+.+++.+||+.||++|||+.|+++
T Consensus       243 ------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          243 ------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             ------------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence                        0111122344789999999999999999999987

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-35  Score=249.26  Aligned_cols=188  Identities=19%  Similarity=0.303  Sum_probs=142.8

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------   89 (284)
                      +.....++|...+.||+|+||.||+|..  +++.||||++...                                     
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            3444567899999999999999999998  7889999998432                                     


Q ss_pred             --------------C-CC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe-cCCccee
Q 039895           90 --------------F-PF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ-EENVAQL  138 (284)
Q Consensus        90 --------------~-~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~-~~~~~kl  138 (284)
                                    + +.               ......++.||+.||.|||   +.+|+||||||+||+++ .++.+||
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl  181 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL  181 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence                          1 11               0456779999999999999   89999999999999999 8899999


Q ss_pred             eccccccccCCCCccccCCCCcccCccccccccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHH
Q 039895          139 FDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFS-EKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV  217 (284)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~  217 (284)
                      +|||++........     ....||+.|+|||++.+..+. .++|||||||++|+|++|..||....          ...
T Consensus       182 ~dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~~~  246 (312)
T 2iwi_A          182 IDFGSGALLHDEPY-----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------EIL  246 (312)
T ss_dssp             CCCSSCEECCSSCB-----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------HHH
T ss_pred             EEcchhhhcccCcc-----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------HHh
Confidence            99999987654332     125689999999998776664 58999999999999999999985311          100


Q ss_pred             HHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .   ....+                  .......+.+++.+||+.||++|||+.|+++
T Consensus       247 ~---~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          247 E---AELHF------------------PAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             H---TCCCC------------------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             h---hccCC------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0   00000                  0112234789999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.3e-34  Score=245.21  Aligned_cols=196  Identities=20%  Similarity=0.325  Sum_probs=138.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..  +|+.||||++...                                          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            45688889999999999999998  7899999998543                                          


Q ss_pred             -----------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccc
Q 039895           90 -----------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFT  142 (284)
Q Consensus        90 -----------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg  142 (284)
                                 +|..                .....++.|++.||.|||   +.+|+|+||||+|||++.++.+||+|||
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg  161 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG  161 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence                       1100                345679999999999999   8999999999999999999999999999


Q ss_pred             cccccCCCCcc-----------ccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 039895          143 LSLSIPEGETH-----------INDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED  210 (284)
Q Consensus       143 ~a~~~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~  210 (284)
                      ++.........           ........||+.|+|||++.+. .++.++|||||||++|+|++   ||...       
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-------  231 (303)
T 1zy4_A          162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-------  231 (303)
T ss_dssp             CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-------
T ss_pred             chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-------
Confidence            99776432110           1111235689999999998765 68999999999999999998   44211       


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ........... ....  ...+..          ....+..+.+++.+||+.||++|||+.++++
T Consensus       232 ~~~~~~~~~~~-~~~~--~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          232 MERVNILKKLR-SVSI--EFPPDF----------DDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHHHHHH-STTC--CCCTTC----------CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhHHHHHHhcc-cccc--ccCccc----------cccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            11111111111 1100  000000          1122334789999999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=3.6e-34  Score=247.71  Aligned_cols=206  Identities=17%  Similarity=0.201  Sum_probs=148.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .++|...+.||+|+||.||+|..+|+.||||++...                                            
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            367888899999999999999999999999987421                                            


Q ss_pred             --------------CCC-----------------------chhHHHHHHHHHHHHHHhccCCC-CCeeecccccCcEEEe
Q 039895           90 --------------FPF-----------------------SVSKLKIAIEIASAVAYLHVGFS-RPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 --------------~~~-----------------------~~~~~~i~~~i~~gL~~LH~~~~-~~ivHrDlkp~NILl~  131 (284)
                                    +|.                       ...+..++.|++.||.|||   + .+|+|+||||+|||++
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~~  186 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILMD  186 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEEC
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEEc
Confidence                          110                       1456789999999999999   7 9999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCC-CCCc-chhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG-DFSE-KSDVYSFGALLLELLTGKKISYSSHFDDGE  209 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwS~G~il~elltg~~p~~~~~~~~~~  209 (284)
                      .++.+||+|||++........     ....||+.|+|||++.+. .++. ++|||||||++|+|++|..||.....    
T Consensus       187 ~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----  257 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDKKI-----KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS----  257 (348)
T ss_dssp             TTSCEEECCCTTCEECBTTEE-----CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC----
T ss_pred             CCCcEEEeccccccccccccc-----cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc----
Confidence            999999999999987654311     125789999999999877 6666 99999999999999999999865331    


Q ss_pred             cccHHHHHHHHhhcCccccccc--ccccCCCC-CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          210 DYRLQDLVKKYIENESFKEIVD--PAIVGEEG-LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .   ....... .........+  ........ .........+..+.+|+.+||+.||++|||+.|+++
T Consensus       258 ~---~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          258 L---VELFNNI-RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             S---HHHHHHH-TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             H---HHHHHHH-hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0   1111111 1111110000  00000000 000001223445889999999999999999999986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=5.9e-34  Score=262.32  Aligned_cols=215  Identities=19%  Similarity=0.216  Sum_probs=148.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|...+.||+|+||+||+|.+  +|+.||||++...                                          
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            37899999999999999999998  7899999987643                                          


Q ss_pred             ------CCC------------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc---ceeeccc
Q 039895           90 ------FPF------------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV---AQLFDFT  142 (284)
Q Consensus        90 ------~~~------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~---~kl~Dfg  142 (284)
                            +|.                  ......++.|++.||.|||   +.+|+||||||+|||++.++.   +||+|||
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence                  110                  1456789999999999999   899999999999999997764   8999999


Q ss_pred             cccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh
Q 039895          143 LSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE  222 (284)
Q Consensus       143 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
                      ++.........    ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+..       ....|......
T Consensus       170 ~a~~~~~~~~~----~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-------~~~~~~~~i~~  238 (676)
T 3qa8_A          170 YAKELDQGELC----TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-------QPVQWHGKVRE  238 (676)
T ss_dssp             CCCBTTSCCCC----CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-------HHHHSSTTCC-
T ss_pred             ccccccccccc----ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-------chhhhhhhhhc
Confidence            99877544322    22578999999999999999999999999999999999999996532       00110000000


Q ss_pred             cCcccccccccccCC----CC--CCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHH-----HHHHHHHHHh
Q 039895          223 NESFKEIVDPAIVGE----EG--LMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ-----VAKQLRQIYQ  282 (284)
Q Consensus       223 ~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e-----v~~~L~~l~~  282 (284)
                      .............+.    ..  .........+..+.+++.+||+.||++|||+.|     ..+.++.+.+
T Consensus       239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred             ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence            000000000000000    00  000112334566889999999999999999988     5566666654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.1e-32  Score=233.62  Aligned_cols=177  Identities=21%  Similarity=0.262  Sum_probs=129.5

Q ss_pred             hcCCCCC-CeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           54 TDDFDGG-KVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      .++|... +.||+|+||.||+|..  +++.||+|++...                                         
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            3556554 6799999999999998  7899999998654                                         


Q ss_pred             CC-----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceeeccccccccCC
Q 039895           90 FP-----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ~~-----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~Dfg~a~~~~~  149 (284)
                      +|                 .......++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|||++.... 
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-  171 (299)
T 3m2w_A           96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-  171 (299)
T ss_dssp             CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence            11                 11556789999999999999   999999999999999998   7889999999885432 


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                                              +..++.++|||||||++|||++|..||.......                 .....
T Consensus       172 ------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-----------------~~~~~  210 (299)
T 3m2w_A          172 ------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----------------ISPGM  210 (299)
T ss_dssp             ------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------------CCS
T ss_pred             ------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-----------------hhHHH
Confidence                                    2346789999999999999999999996532100                 00000


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .............+.....+..+.+++.+||+.||++|||+.|+++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            0000000000001111234456889999999999999999999986

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.98  E-value=1.1e-32  Score=258.21  Aligned_cols=184  Identities=22%  Similarity=0.280  Sum_probs=144.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe---CCcceEEEeecCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL---QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~------------------------------------------   89 (284)
                      +.|...+.||+|+||.||+|.+   +|+.||||++...                                          
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            6788888999999999999998   5789999988533                                          


Q ss_pred             -----CC-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 -----FP-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 -----~~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                           +|             ....++.++.||+.||.|||   +.+|+||||||+|||++.+ .+||+|||+++..... 
T Consensus       160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-  234 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-  234 (681)
T ss_dssp             EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC-
T ss_pred             EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcccC-
Confidence                 11             01567889999999999999   8999999999999999975 8999999999876543 


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                            ....||+.|+|||++.+.. +.++|||||||++|+|++|..|+.....                  ..+.    
T Consensus       235 ------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~------------------~~~~----  285 (681)
T 2pzi_A          235 ------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV------------------DGLP----  285 (681)
T ss_dssp             ------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC------------------SSCC----
T ss_pred             ------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc------------------cccc----
Confidence                  1257999999999987654 8999999999999999999887653210                  0000    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-TIVQVAKQLRQIY  281 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~ev~~~L~~l~  281 (284)
                          .     ..........+.+|+.+||+.||++|| +++++.+.|..+.
T Consensus       286 ----~-----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          286 ----E-----DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             ----T-----TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ----c-----cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence                0     001122345588999999999999999 5667777777664

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.98  E-value=1.4e-32  Score=231.66  Aligned_cols=176  Identities=13%  Similarity=0.069  Sum_probs=132.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTF------------------------------------------   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------------------------------------------   90 (284)
                      +.|...+.||+|+||.||+|.+  +|+.||||++....                                          
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            5688888999999999999999  58999999997541                                          


Q ss_pred             --CCc-------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 --PFS-------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 --~~~-------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                        |..             ...+.++.|++.||.|||   +.+|+||||||+|||++.++.+||+++|             
T Consensus       111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~-------------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA-------------  174 (286)
T ss_dssp             ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred             EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-------------
Confidence              110             456789999999999999   9999999999999999999999998443             


Q ss_pred             CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV  235 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
                                |++       +++.++|||||||++|||++|..||.........                 . .......
T Consensus       175 ----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-----------------~-~~~~~~~  219 (286)
T 3uqc_A          175 ----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-----------------A-PAERDTA  219 (286)
T ss_dssp             ----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-----------------E-ECCBCTT
T ss_pred             ----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-----------------H-HHHHHhc
Confidence                      333       2688999999999999999999999754311100                 0 0000000


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                      .............+..+.+++.+||+.||++| |+.|+++.|+++..
T Consensus       220 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          220 GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence            00000000112234458899999999999999 99999999998764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=2.7e-31  Score=228.72  Aligned_cols=148  Identities=18%  Similarity=0.116  Sum_probs=108.0

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC--------------------cceeeccccccccCCCCcc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN--------------------VAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~Dfg~a~~~~~~~~~  153 (284)
                      .....++.||+.||.|||+  +.+|+||||||+|||++.++                    .+||+|||+++.....   
T Consensus       161 ~~~~~i~~qi~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---  235 (336)
T 2vuw_A          161 ATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---  235 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---
T ss_pred             HHHHHHHHHHHHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---
Confidence            5677899999999999993  47899999999999999887                    8999999999876532   


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHH-HHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGAL-LLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                           ...||+.|+|||++.+.. +.++||||+|++ .+++++|..||....       ................     
T Consensus       236 -----~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~-----  297 (336)
T 2vuw_A          236 -----IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-------WLHYLTDKMLKQMTFK-----  297 (336)
T ss_dssp             -----EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-------HHHHHHHHHHHTCCCS-----
T ss_pred             -----cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh-------hhhHHHHhhhhhhccC-----
Confidence                 157999999999998766 899999998777 677888888863100       0000111111010000     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                           .....+.....++.+.+|+.+||+.|     |+.|++
T Consensus       298 -----~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          298 -----TKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             -----SCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             -----cccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence                 11112334567778999999999976     999987

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.87  E-value=7.5e-24  Score=193.94  Aligned_cols=95  Identities=17%  Similarity=0.160  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCC
Q 039895           97 LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD  176 (284)
Q Consensus        97 ~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (284)
                      .+|+.||+.||+|+|   ++|||||||||+|||++.+|.+||+|||+|+........   ..+.+||+.|||||++.+ .
T Consensus       342 ~~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~---~~t~vGTp~YmAPE~l~g-~  414 (569)
T 4azs_A          342 EKILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW---PTNLVQSFFVFVNELFAE-N  414 (569)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CC---SHHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCcc---ccCceechhhccHHHhCC-C
Confidence            468999999999999   999999999999999999999999999999877544322   122679999999999875 4


Q ss_pred             CCcchhHHHHHHHHHHHHhCCC
Q 039895          177 FSEKSDVYSFGALLLELLTGKK  198 (284)
Q Consensus       177 ~~~~~DvwS~G~il~elltg~~  198 (284)
                      +..++|+||+|++++++.++..
T Consensus       415 ~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          415 KSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             --------------CCCCTTHH
T ss_pred             CCCcccccccccchhhhccccc
Confidence            6778999999998877655543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.84  E-value=2.6e-22  Score=182.78  Aligned_cols=138  Identities=15%  Similarity=0.112  Sum_probs=102.9

Q ss_pred             CCCCeeeecCCceEEEEEeCCcceEEEeecCC------------------------------------------------
Q 039895           58 DGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------------------------------   89 (284)
Q Consensus        58 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------------------------------   89 (284)
                      ...++||+|+||.||+|...+..+++|+....                                                
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            34578999999999999889999999986432                                                


Q ss_pred             -CCCc-------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc----CC
Q 039895           90 -FPFS-------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN----DS  157 (284)
Q Consensus        90 -~~~~-------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~----~~  157 (284)
                       +|..       ...+.++.|++.||.|||   +.+|+||||||+|||++.  .+||+|||+++..........    ..
T Consensus       419 E~~~ggsL~~~l~~~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~  493 (540)
T 3en9_A          419 SYINGKLAKDVIEDNLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFK  493 (540)
T ss_dssp             ECCCSEEHHHHSTTCTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhh
Confidence             2211       124589999999999999   999999999999999998  999999999988765322110    01


Q ss_pred             CCcccCccccccccccC--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 039895          158 NRVIGTFGFMAPEYRTT--GDFSEKSDVYSFGALLLELLTGKKIS  200 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~G~il~elltg~~p~  200 (284)
                      ....||+.|||||++..  ..|+..+|+||..+-..+-+.++.++
T Consensus       494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            12679999999999876  56788899999999888887776554

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.77  E-value=1.8e-19  Score=151.00  Aligned_cols=99  Identities=14%  Similarity=0.008  Sum_probs=81.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC--------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--------------------------------------------   89 (284)
                      ..|...+.||+|+||.||+|.+ +|+.||+|++...                                            
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~  169 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKV  169 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCE
T ss_pred             eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeE
Confidence            3444558999999999999999 7899999998421                                            


Q ss_pred             -----------CCCc--------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 -----------FPFS--------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 -----------~~~~--------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                                 +|..        .....++.|++.||.|||   +.+|+||||||+|||++ ++.+||+|||+++.    
T Consensus       170 ~~~~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~----  241 (282)
T 1zar_A          170 YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE----  241 (282)
T ss_dssp             EEEETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECCCTTCEE----
T ss_pred             EeccceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE----
Confidence                       1111        345689999999999999   99999999999999999 99999999999843    


Q ss_pred             CccccCCCCcccCcccccccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~  173 (284)
                                  +..++|||++.
T Consensus       242 ------------~~~~~a~e~l~  252 (282)
T 1zar_A          242 ------------VGEEGWREILE  252 (282)
T ss_dssp             ------------TTSTTHHHHHH
T ss_pred             ------------CCCCCHHHHHH
Confidence                        34468898764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.62  E-value=4.2e-16  Score=128.89  Aligned_cols=49  Identities=14%  Similarity=0.187  Sum_probs=44.0

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccccccc
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSI  147 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~  147 (284)
                      ....++.|++.||.|||.  ..+|+||||||+|||++.  .++|+|||+|...
T Consensus       171 ~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          171 DVEGIFNDVVENVKRLYQ--EAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            457899999999999994  579999999999999998  8999999998654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.57  E-value=3.4e-15  Score=129.08  Aligned_cols=89  Identities=10%  Similarity=0.065  Sum_probs=73.9

Q ss_pred             CCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------------   89 (284)
                      -|.....||+|++|.||+|.. +|+.||||+++..                                             
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            377788999999999999998 8999999987532                                             


Q ss_pred             ----------------CCC---------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC----------
Q 039895           90 ----------------FPF---------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN----------  134 (284)
Q Consensus        90 ----------------~~~---------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----------  134 (284)
                                      ++.         ......++.|++.+|.+||   ..|||||||||.|||++.++          
T Consensus       176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d~~~~~~  252 (397)
T 4gyi_A          176 PVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDAEDPSSITL  252 (397)
T ss_dssp             SCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSCTTSEEE
T ss_pred             CCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCccccccccc
Confidence                            000         0345678999999999999   89999999999999999877          


Q ss_pred             cceeecccccccc
Q 039895          135 VAQLFDFTLSLSI  147 (284)
Q Consensus       135 ~~kl~Dfg~a~~~  147 (284)
                      .+.|+||+-+...
T Consensus       253 ~~~iID~~Q~V~~  265 (397)
T 4gyi_A          253 TPIIIXFPQMVSM  265 (397)
T ss_dssp             EEEECCCTTCEET
T ss_pred             ceEEEEeCCcccC
Confidence            3789999976544

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.49  E-value=1.7e-07  Score=77.04  Aligned_cols=96  Identities=18%  Similarity=0.099  Sum_probs=72.3

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC---------------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---------------------------------------   89 (284)
                      .+.....+|.....++.|+.+.||+....+..+++|+....                                       
T Consensus         8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A            8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            34455667776677888889999999988889999998641                                       


Q ss_pred             ---CCC----------chhHHHHHHHHHHHHHHhccCC------------------------------------------
Q 039895           90 ---FPF----------SVSKLKIAIEIASAVAYLHVGF------------------------------------------  114 (284)
Q Consensus        90 ---~~~----------~~~~~~i~~~i~~gL~~LH~~~------------------------------------------  114 (284)
                         +..          ......++.+++.+|..||...                                          
T Consensus        88 v~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (263)
T 3tm0_A           88 LMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP  167 (263)
T ss_dssp             EEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred             EEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence               000          0123478899999999999510                                          


Q ss_pred             --------------CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 --------------SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 --------------~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                                    ...++|+|++|.|||++.+..+.|.||+.+
T Consensus       168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence                          145899999999999987666679999865

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.34  E-value=3.2e-07  Score=74.91  Aligned_cols=27  Identities=15%  Similarity=0.160  Sum_probs=24.4

Q ss_pred             eeecccccCcEEEecCCcceeeccccc
Q 039895          118 VVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       118 ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ++|+|++|.|||++.++.+.|.||+.+
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhc
Confidence            999999999999987766779999976

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.08  E-value=2.1e-06  Score=72.11  Aligned_cols=83  Identities=13%  Similarity=0.192  Sum_probs=48.7

Q ss_pred             CCeeecccccCcEEEec--CCcceeeccccccccCCCCccccCCCCc--cc---------Cccccc-cccccCCCCCcch
Q 039895          116 RPVVSRDIKPTTIVLQE--ENVAQLFDFTLSLSIPEGETHINDSNRV--IG---------TFGFMA-PEYRTTGDFSEKS  181 (284)
Q Consensus       116 ~~ivHrDlkp~NILl~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~--~g---------t~~y~a-PE~~~~~~~~~~~  181 (284)
                      ..++|+|++|.||+++.  ...+.|.||+.+................  .+         ..+... |+...  ......
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~--r~~~~~  268 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLE--KYRMKE  268 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHH--HHHHHH
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHH--HHHHHH
Confidence            35799999999999998  5567899999876543211100000000  00         001111 22111  011236


Q ss_pred             hHHHHHHHHHHHHhCCCCC
Q 039895          182 DVYSFGALLLELLTGKKIS  200 (284)
Q Consensus       182 DvwS~G~il~elltg~~p~  200 (284)
                      +.|++|.++|.+.+|..++
T Consensus       269 ~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          269 KYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHcCCHHH
Confidence            8999999999999997664

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.05  E-value=6.4e-06  Score=70.79  Aligned_cols=87  Identities=11%  Similarity=0.071  Sum_probs=65.6

Q ss_pred             CCeeeecCCceEEEEEeCCcceEEEeec--CC-------------------------------CCC--------------
Q 039895           60 GKVIMKCLFYKLYKGFLQDRPISVMKFE--DT-------------------------------FPF--------------   92 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~--~~-------------------------------~~~--------------   92 (284)
                      .+.|+.|.++.||+....+..+++|+..  ..                               +|.              
T Consensus        43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            3468899999999999877889999876  22                               000              


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCC-------------------------------------------
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGF-------------------------------------------  114 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~-------------------------------------------  114 (284)
                                     ...+..++.+++..|..||...                                           
T Consensus       123 v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (359)
T 3dxp_A          123 VSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMD  202 (359)
T ss_dssp             CCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHH
T ss_pred             cCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHH
Confidence                           1345678999999999999520                                           


Q ss_pred             ------------CCCeeecccccCcEEEecCCc--ceeeccccccc
Q 039895          115 ------------SRPVVSRDIKPTTIVLQEENV--AQLFDFTLSLS  146 (284)
Q Consensus       115 ------------~~~ivHrDlkp~NILl~~~~~--~kl~Dfg~a~~  146 (284)
                                  ...++|+|++|.|||++.++.  +.|.||+.+..
T Consensus       203 ~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          203 WLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                        256999999999999997753  68999998754

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.45  E-value=0.013  Score=48.26  Aligned_cols=30  Identities=20%  Similarity=0.188  Sum_probs=25.2

Q ss_pred             CCCeeeecCCceEEEEEe-CCcceEEEeecC
Q 039895           59 GGKVIMKCLFYKLYKGFL-QDRPISVMKFED   88 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~   88 (284)
                      ....+|.|..+.||+.+. +|+.|.||+...
T Consensus        19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~   49 (288)
T 3f7w_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPD   49 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCT
T ss_pred             EEEecCCCCCeEEEEEEECCCCEEEEEEeCC
Confidence            345689999999999999 889999998543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.12  E-value=0.015  Score=48.41  Aligned_cols=30  Identities=13%  Similarity=0.286  Sum_probs=24.2

Q ss_pred             CeeecccccCcEEEec---CCc-ceeeccccccc
Q 039895          117 PVVSRDIKPTTIVLQE---ENV-AQLFDFTLSLS  146 (284)
Q Consensus       117 ~ivHrDlkp~NILl~~---~~~-~kl~Dfg~a~~  146 (284)
                      .++|+|+.|.|||++.   ++. +.|.||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            4699999999999987   344 47999997633

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.97  E-value=0.0046  Score=52.10  Aligned_cols=30  Identities=17%  Similarity=0.199  Sum_probs=27.3

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ...++|+|+.+.|||++.++.+.|.||+.+
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            578999999999999988888999999965

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.81  E-value=0.082  Score=41.59  Aligned_cols=90  Identities=11%  Similarity=0.011  Sum_probs=53.9

Q ss_pred             CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccc
Q 039895           91 PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPE  170 (284)
Q Consensus        91 ~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  170 (284)
                      ..+.+...++.|.+.+|.-+-.  ...-..+=+.|..|++..+|.+.+.+ +.+.               .....+.|||
T Consensus        46 lsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------------~~~~~~~~pe  107 (229)
T 2yle_A           46 INEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------------AGEPPPVAGK  107 (229)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------------------C
T ss_pred             cCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc---------------ccccCCCChh
Confidence            3457788899999999877620  11111223456889999999887764 2110               0122356888


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 039895          171 YRTTGDFSEKSDVYSFGALLLELLTGKKI  199 (284)
Q Consensus       171 ~~~~~~~~~~~DvwS~G~il~elltg~~p  199 (284)
                      ... ...+.+.=|||+|+++|.-+--..|
T Consensus       108 ~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A          108 LGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             CSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             hcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence            653 3446778899999999998875544

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.34  E-value=0.017  Score=50.41  Aligned_cols=77  Identities=16%  Similarity=0.211  Sum_probs=46.7

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCccc--CccccccccccCC---CCCcchhHHHHHHH
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIG--TFGFMAPEYRTTG---DFSEKSDVYSFGAL  189 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwS~G~i  189 (284)
                      ...++|+|++|.|||++.++ +.+.||+.+...........    ..+  ...|.+|+.....   .-....++.+....
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA----YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQ  305 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH----HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH----HHHHHHHHHHhcccccccccchHHHHHHHHHHHHH
Confidence            78899999999999998776 99999988754321110000    010  1235666544311   11223455577777


Q ss_pred             HHHHHhC
Q 039895          190 LLELLTG  196 (284)
Q Consensus       190 l~elltg  196 (284)
                      +|+.+++
T Consensus       306 ~~~~y~~  312 (420)
T 2pyw_A          306 TWNLFNK  312 (420)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777655

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=94.22  E-value=0.051  Score=45.62  Aligned_cols=33  Identities=18%  Similarity=0.176  Sum_probs=27.7

Q ss_pred             CCCeeecccccCcEEEecC----Ccceeecccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEE----NVAQLFDFTLSLSI  147 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~----~~~kl~Dfg~a~~~  147 (284)
                      ...++|+|+.+.|||++.+    +.+.|.||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            5689999999999999874    67899999977543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.81  E-value=0.024  Score=46.01  Aligned_cols=27  Identities=15%  Similarity=0.231  Sum_probs=24.3

Q ss_pred             eeecccccCcEEEecCCcceeeccccc
Q 039895          118 VVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       118 ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ++|+|+.+.|||++.++.+-|.||+.+
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a  221 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRV  221 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECccc
Confidence            799999999999998777779999976

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=93.59  E-value=0.024  Score=47.35  Aligned_cols=30  Identities=17%  Similarity=0.386  Sum_probs=25.6

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ..+++|+|+.+.|||++.++.+.|.||+.+
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a  215 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFA  215 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhc
Confidence            356899999999999998766689999865

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.32  E-value=0.032  Score=47.31  Aligned_cols=30  Identities=7%  Similarity=0.211  Sum_probs=25.6

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ...++|+|+.+.|||++.+..+.|.||+.+
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a  250 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMV  250 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGC
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEccccc
Confidence            467999999999999996555789999976

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.11  E-value=0.092  Score=43.84  Aligned_cols=30  Identities=10%  Similarity=0.109  Sum_probs=25.3

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ...++|+|+++.|||++ + .+.|.||+.+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            56689999999999998 4 789999987643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=91.11  E-value=0.22  Score=41.06  Aligned_cols=31  Identities=10%  Similarity=-0.005  Sum_probs=25.7

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ...++|+|+.+.||+ ..++.+.+.||..+..
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            456899999999999 6667789999987643

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=90.66  E-value=0.11  Score=44.35  Aligned_cols=30  Identities=20%  Similarity=0.292  Sum_probs=24.1

Q ss_pred             CCCeeecccccCcEEEecCCcceeecccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                      ...++|+|+.+.|||++.++ +.+.||..+.
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            35689999999999998654 7899998663

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=90.41  E-value=0.11  Score=43.94  Aligned_cols=32  Identities=13%  Similarity=0.261  Sum_probs=27.6

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ...++|+|+.+.||+++.++.+.|.||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            45799999999999999888899999986644

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=90.38  E-value=0.31  Score=41.85  Aligned_cols=31  Identities=13%  Similarity=0.333  Sum_probs=26.0

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ...++|+|+.|.|||++.++ +.+.||..+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~~-~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEHE-TKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCCC-eEEEeCccccc
Confidence            57899999999999998654 88999977643

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=90.15  E-value=0.13  Score=44.97  Aligned_cols=17  Identities=18%  Similarity=0.374  Sum_probs=14.8

Q ss_pred             CeeecccccCcEEEecC
Q 039895          117 PVVSRDIKPTTIVLQEE  133 (284)
Q Consensus       117 ~ivHrDlkp~NILl~~~  133 (284)
                      .++|+|+.+.|||++.+
T Consensus       250 v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEECSCCCGGGEEEEC-
T ss_pred             EEEeCCCCCCeEEeeCC
Confidence            48999999999999875

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=89.97  E-value=0.28  Score=43.30  Aligned_cols=17  Identities=12%  Similarity=0.149  Sum_probs=15.1

Q ss_pred             CCCeeecccccCcEEEe
Q 039895          115 SRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~  131 (284)
                      ...++|+|+.+.|||++
T Consensus       289 ~~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          289 PIVLCHCDLLSSNIINT  305 (458)
T ss_dssp             CEEEECSCCCGGGEEEC
T ss_pred             CeeEEecCCCCCcEEee
Confidence            35689999999999998

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=88.72  E-value=0.22  Score=42.83  Aligned_cols=30  Identities=30%  Similarity=0.388  Sum_probs=25.8

Q ss_pred             CCCeeecccccCcEEEecC----Ccceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEE----NVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~----~~~kl~Dfg~a  144 (284)
                      ...++|+|+.+.|||++.+    +.+.+.||..+
T Consensus       219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a  252 (379)
T 3feg_A          219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS  252 (379)
T ss_dssp             CEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred             CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence            3468999999999999876    68899999876

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=85.67  E-value=0.97  Score=35.44  Aligned_cols=76  Identities=16%  Similarity=0.215  Sum_probs=52.8

Q ss_pred             hhHHHHHHHHHHHHH-HhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccc
Q 039895           94 VSKLKIAIEIASAVA-YLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYR  172 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~-~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  172 (284)
                      ..+++++..|+.-.. +++     .-+|--|.|+||+++.++.++|.-.|+-..+                    +|.- 
T Consensus        85 ~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l--------------------pP~e-  138 (219)
T 4ano_A           85 LSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHVGVKESL--------------------PPDE-  138 (219)
T ss_dssp             HHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCCEETTTB--------------------SSCS-
T ss_pred             HHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEcCCcccC--------------------CCCC-
Confidence            678888888887666 444     4467778899999999999999988864222                    2221 


Q ss_pred             cCCCCCcchh-HHHHHHHHHHHHhCCCCC
Q 039895          173 TTGDFSEKSD-VYSFGALLLELLTGKKIS  200 (284)
Q Consensus       173 ~~~~~~~~~D-vwS~G~il~elltg~~p~  200 (284)
                          .+ ..| .-.+=|++..++.++..|
T Consensus       139 ----~~-ee~fl~qyKali~all~~K~~F  162 (219)
T 4ano_A          139 ----WD-DERLLREVKATVLALTEGEYRF  162 (219)
T ss_dssp             ----CC-HHHHHHHHHHHHHHHTTCSSCH
T ss_pred             ----CC-HHHHHHHHHHHHHHHHcCCCCH
Confidence                11 122 236677888888887665

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=85.12  E-value=0.42  Score=41.30  Aligned_cols=28  Identities=29%  Similarity=0.367  Sum_probs=23.2

Q ss_pred             eeecccccCcEEEe------cCCcceeecccccc
Q 039895          118 VVSRDIKPTTIVLQ------EENVAQLFDFTLSL  145 (284)
Q Consensus       118 ivHrDlkp~NILl~------~~~~~kl~Dfg~a~  145 (284)
                      ++|+|+.+.|||+.      ++..+.+.||..|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            57999999999993      45678999998763

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=84.11  E-value=0.44  Score=39.71  Aligned_cols=27  Identities=0%  Similarity=0.056  Sum_probs=23.5

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFT  142 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg  142 (284)
                      ...++|+|+.+.|++++.++ +.|.|+.
T Consensus       206 ~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          206 KPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             CCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             CceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            56799999999999999887 8888874

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=82.68  E-value=0.6  Score=40.72  Aligned_cols=30  Identities=20%  Similarity=0.376  Sum_probs=25.7

Q ss_pred             CCCeeecccccCcEEEecCCcceeecccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLSL  145 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~  145 (284)
                      ...++|+|+.+.||+ +.++.+.+.||..+.
T Consensus       261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             CEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             CceEECCCCCcccee-cCCCcEEEEecccCC
Confidence            345899999999999 778889999998764

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=80.61  E-value=1.6  Score=34.08  Aligned_cols=78  Identities=14%  Similarity=0.120  Sum_probs=55.1

Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCcccccccccc
Q 039895           94 VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRT  173 (284)
Q Consensus        94 ~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  173 (284)
                      ..+++++..|+.-..+++     .-+|--|.|+||+++.++.+++.-.|+...+                    +|.   
T Consensus        81 ~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f~~~~~p~i~~RGik~~l--------------------~P~---  132 (215)
T 4ann_A           81 NEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFFTRDGLPIAKTRGLQNVV--------------------DPL---  132 (215)
T ss_dssp             HHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEECTTSCEEESCCEETTTB--------------------SCC---
T ss_pred             HHHHHHHHHHHHHHHHhc-----CceEEEEecceEEEcCCCCEEEEEccCccCC--------------------CCC---
Confidence            678899999988776555     2467789999999999999999988864322                    221   


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 039895          174 TGDFSEKSDVYSFGALLLELLTGKKISY  201 (284)
Q Consensus       174 ~~~~~~~~DvwS~G~il~elltg~~p~~  201 (284)
                        ..+...=.-.+=|++..+++++..|.
T Consensus       133 --~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          133 --PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             --CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence              11111123367788888999987763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	284
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-28
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-27
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-26
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-26
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-26
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-26
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-25
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	9e-25
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-25
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-24
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-24
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-24
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-23
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-23
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-23
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-23
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-23
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-23
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-23
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	9e-23
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-22
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-22
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-22
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-21
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-21
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-20
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-19
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-19
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-18
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-18
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-18
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-17
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-16
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-15
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-13
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-13
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-13
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	6e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-07
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 2e-28
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 26/190 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + IA + A  + YLH    + ++ RD+K   I L E+   ++ DF L+          + 
Sbjct: 107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-HQ 162

Query: 157 SNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
             ++ G+  +MAPE    +    +S +SDVY+FG +L EL+TG+      + +     ++
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP----YSNINNRDQI 218

Query: 214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
             +V +   +    ++             P+          L  +CL +   +RP   Q+
Sbjct: 219 IFMVGRGYLSPDLSKVRSN---------CPKA------MKRLMAECLKKKRDERPLFPQI 263

Query: 274 AKQLRQIYQS 283
              +  + +S
Sbjct: 264 LASIELLARS 273

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 9e-27
 Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 26/187 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            ++  +++  + YL     +  V RD+    ++L   + A++ DF LS ++   +++   
Sbjct: 112 AELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 168

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
            +       + APE      FS +SDV+S+G  + E L+  +      +   +   +   
Sbjct: 169 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ----KPYKKMKGPEVMAF 224

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           +++    E   E                          L   C      DRP  + V ++
Sbjct: 225 IEQGKRMECPPECPPELY-------------------ALMSDCWIYKWEDRPDFLTVEQR 265

Query: 277 LRQIYQS 283
           +R  Y S
Sbjct: 266 MRACYYS 272

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 1e-26
 Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 28/187 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L +A +IA  +A++     R  + RD++   I++ +    ++ DF L+  I + E     
Sbjct: 112 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-- 166

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                    + APE    G F+ KSDV+SFG LL E++T  +I Y             ++
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY-------PGMTNPEV 219

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           ++          +V P    EE               +L   C  E   DRPT   +   
Sbjct: 220 IQNLERGY---RMVRPDNCPEE-------------LYQLMRLCWKERPEDRPTFDYLRSV 263

Query: 277 LRQIYQS 283
           L   + +
Sbjct: 264 LEDFFTA 270

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 2e-26
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 97  LKIAIEIASAVAYLHVGF-----SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE 151
           +K+A+  AS +A+LH+          +  RD+K   I++++     + D  L++      
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162

Query: 152 THIN-DSNRVIGTFGFMAPEYRTT------GDFSEKSDVYSFGALLLELLTGKKISYSSH 204
             I+   N  +GT  +MAPE           +  +++D+Y+ G +  E+     I     
Sbjct: 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI---GG 219

Query: 205 FDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESE 264
             +       DLV      E  +++V    +        +  + L +  ++  +C   + 
Sbjct: 220 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 279

Query: 265 GDRPTIVQVAKQLRQIYQS 283
             R T +++ K L Q+ Q 
Sbjct: 280 AARLTALRIKKTLSQLSQQ 298

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 2e-26
 Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 26/187 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +++  +++  + YL        V RD+    ++L  ++ A++ DF LS ++   E +   
Sbjct: 110 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                    + APE      FS KSDV+SFG L+ E  +  +  Y          +  ++
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY-------RGMKGSEV 219

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                + E       PA    E               +L   C +    +RP    V  +
Sbjct: 220 TAMLEKGERMG---CPAGCPRE-------------MYDLMNLCWTYDVENRPGFAAVELR 263

Query: 277 LRQIYQS 283
           LR  Y  
Sbjct: 264 LRNYYYD 270

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 7e-26
 Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 28/187 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L + +++   +AYL       V+ RD+     ++ E  V ++ DF ++  + + +     
Sbjct: 104 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT--S 158

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           S        + +PE  +   +S KSDV+SFG L+ E+ +  KI Y       E+    ++
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-------ENRSNSEV 211

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           V+          +  P +                   ++   C  E   DRP   ++ +Q
Sbjct: 212 VEDISTGF---RLYKPRLASTH-------------VYQIMNHCWKERPEDRPAFSRLLRQ 255

Query: 277 LRQIYQS 283
           L +I +S
Sbjct: 256 LAEIAES 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (246), Expect = 6e-25
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 27/204 (13%)

Query: 82  SVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDF 141
           + ++ E   P     +   +++A  + +L     +  V RD+     +L E+   ++ DF
Sbjct: 118 NFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADF 174

Query: 142 TLSLSIPEGETH-INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKIS 200
            L+  + + E   +++         +MA E   T  F+ KSDV+SFG LL EL+T     
Sbjct: 175 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 234

Query: 201 YSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCL 260
           Y        D    D+    ++    + ++ P    +                E+  KC 
Sbjct: 235 Y-------PDVNTFDITVYLLQG---RRLLQPEYCPDP-------------LYEVMLKCW 271

Query: 261 SESEGDRPTIVQVAKQLRQIYQSN 284
                 RP+  ++  ++  I+ + 
Sbjct: 272 HPKAEMRPSFSELVSRISAIFSTF 295

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 9e-25
 Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 28/188 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +A +IAS +AY+        V RD++   I++ E  V ++ DF L+  I + E     
Sbjct: 116 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-- 170

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                    + APE    G F+ KSDV+SFG LL EL T  +      +    +  + D 
Sbjct: 171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR----VPYPGMVNREVLDQ 226

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           V++        E  +                      +L  +C  +   +RPT   +   
Sbjct: 227 VERGYRMPCPPECPESLH-------------------DLMCQCWRKEPEERPTFEYLQAF 267

Query: 277 LRQIYQSN 284
           L   + S 
Sbjct: 268 LEDYFTST 275

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 9e-25
 Identities = 30/187 (16%), Positives = 69/187 (36%), Gaps = 26/187 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +   IA+ + YL    +   V RD+    I++    V ++ DF LS  + +       
Sbjct: 113 VGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 169

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           ++       + APE  +   F+  SDV+SFG ++ E++T  +      + +  ++ +   
Sbjct: 170 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE----RPYWELSNHEVMKA 225

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           +       +  +                         +L  +C  +    RP    +   
Sbjct: 226 INDGFRLPTPMDCPSAIY-------------------QLMMQCWQQERARRPKFADIVSI 266

Query: 277 LRQIYQS 283
           L ++ ++
Sbjct: 267 LDKLIRA 273

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 1e-24
 Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 33/177 (18%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
                E+A+A++Y H   S+ V+ RDIKP  ++L      ++ DF  S+  P        
Sbjct: 109 ATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--- 162

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
              + GT  ++ PE        EK D++S G L  E L GK       F+          
Sbjct: 163 --TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK-----PPFEANTYQETYKR 215

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
           + +        E   P  V E                +L  + L  +   RP + +V
Sbjct: 216 ISR-------VEFTFPDFVTEG-------------ARDLISRLLKHNPSQRPMLREV 252

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 2e-24
 Identities = 48/284 (16%), Positives = 99/284 (34%), Gaps = 44/284 (15%)

Query: 8   RKSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCL 67
           ++    +E R  M        E  I    G H  + +      K          VI++  
Sbjct: 52  KEGATHSEHRALMS-------ELKILIHIGHHLNVVNLLGACTKPGGPLM----VIVEFC 100

Query: 68  FYKLYKGFLQDRPISVMKFEDTFPFSVSK-------LKIAIEIASAVAYLHVGFSRPVVS 120
            +     +L+ +    + ++                +  + ++A  + +L    SR  + 
Sbjct: 101 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIH 157

Query: 121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEK 180
           RD+    I+L E+NV ++ DF L+  I +   ++           +MAPE      ++ +
Sbjct: 158 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR-KGDARLPLKWMAPETIFDRVYTIQ 216

Query: 181 SDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGL 240
           SDV+SFG LL E+ +     Y          ++ +   + ++  +     D         
Sbjct: 217 SDVWSFGVLLWEIFSLGASPY-------PGVKIDEEFCRRLKEGTRMRAPDY-------- 261

Query: 241 MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN 284
               +        +    C       RPT  ++ + L  + Q+N
Sbjct: 262 -TTPE------MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 298

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.1 bits (238), Expect = 8e-24
 Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 27/184 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L IA ++A+ +AYL     R  V RD+     ++ E  V ++ DF LS +I   + +   
Sbjct: 143 LCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA- 198

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                    +M PE      ++ +SDV+++G +L E+ +     Y               
Sbjct: 199 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY--------------- 243

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                   + +E++   +     L  PE     L    L   C S+   DRP+   + + 
Sbjct: 244 -----YGMAHEEVIY-YVRDGNILACPENCPLELY--NLMRLCWSKLPADRPSFCSIHRI 295

Query: 277 LRQI 280
           L+++
Sbjct: 296 LQRM 299

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.0 bits (233), Expect = 2e-23
 Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 28/183 (15%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
           ++  ++  A+ YL     +  + RD+     ++ ++ V ++ DF LS  + + E     S
Sbjct: 104 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS--S 158

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV 217
                   +  PE      FS KSD+++FG L+ E+ +  K+ Y       E +   +  
Sbjct: 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY-------ERFTNSETA 211

Query: 218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQL 277
           +   +      +  P +  E+                + + C  E   +RPT   +   +
Sbjct: 212 EHIAQG---LRLYRPHLASEK-------------VYTIMYSCWHEKADERPTFKILLSNI 255

Query: 278 RQI 280
             +
Sbjct: 256 LDV 258

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.1 bits (236), Expect = 2e-23
 Identities = 35/172 (20%), Positives = 71/172 (41%), Gaps = 12/172 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            K++I +   + YL       ++ RD+KP+ I++      +L DF +S  + +       
Sbjct: 107 GKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---- 160

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
            N  +GT  +M+PE      +S +SD++S G  L+E+  G+           +   L+ +
Sbjct: 161 -NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-----IPPPDAKELELM 214

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP 268
               +E ++ +    P   G     +    +  +   EL    ++E     P
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP 266

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.8 bits (235), Expect = 2e-23
 Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 28/189 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           + +   IA+ + YL        V RD+    I++    V ++ DF LS  + +  +    
Sbjct: 131 VGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 187

Query: 157 SNRV--IGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
           ++ +       + APE      F+  SDV+S+G ++ E+++  +  Y        D   Q
Sbjct: 188 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------WDMTNQ 240

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA 274
           D++    ++      +D           P          +L   C  +    RP   Q+ 
Sbjct: 241 DVINAIEQDYRLPPPMD----------CPSA------LHQLMLDCWQKDRNHRPKFGQIV 284

Query: 275 KQLRQIYQS 283
             L ++ ++
Sbjct: 285 NTLDKMIRN 293

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (235), Expect = 3e-23
 Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 26/181 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A ++A  + +L     +  V RD+    +++    V ++ DF L+  I     ++  
Sbjct: 167 LCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 223

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
            N       +MAPE    G ++ KSDV+S+G LL E+ +     Y               
Sbjct: 224 GN-ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI------------ 270

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                 + +F +++      ++     E+         +   C +     RP+   +   
Sbjct: 271 ----PVDANFYKLIQNGFKMDQPFYATEE------IYIIMQSCWAFDSRKRPSFPNLTSF 320

Query: 277 L 277
           L
Sbjct: 321 L 321

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 4e-23
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 27/186 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L   ++IA  + YL     R +V RD+    ++++     ++ DF L+  +   E   + 
Sbjct: 114 LNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH- 169

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +        +MA E      ++ +SDV+S+G  + EL+T     Y       +     ++
Sbjct: 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY-------DGIPASEI 222

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
                + E       P I   +                +  KC       RP   ++  +
Sbjct: 223 SSILEKGERLP---QPPICTID-------------VYMIMVKCWMIDADSRPKFRELIIE 266

Query: 277 LRQIYQ 282
             ++ +
Sbjct: 267 FSKMAR 272

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.1 bits (233), Expect = 5e-23
 Identities = 37/227 (16%), Positives = 78/227 (34%), Gaps = 26/227 (11%)

Query: 56  DFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFS 115
           ++     ++  L  K           ++M+ ++        L  + ++A  +A+L    S
Sbjct: 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---S 163

Query: 116 RPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTG 175
           +  + RD+    I+L    + ++ DF L+  I     ++           +MAPE     
Sbjct: 164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV-KGNARLPVKWMAPESIFNC 222

Query: 176 DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIV 235
            ++ +SDV+S+G  L EL +     Y     D                  F +++     
Sbjct: 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVD----------------SKFYKMIKEGFR 266

Query: 236 GEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ 282
                  P +        ++   C       RPT  Q+ + + +   
Sbjct: 267 MLSPEHAPAE------MYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (229), Expect = 8e-23
 Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 32/184 (17%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           LK ++++  A+ YL        V RD+    +++ E+NVA++ DF L+      +     
Sbjct: 106 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT--- 159

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                    + APE      FS KSDV+SFG LL E+ +  ++ Y           L+D+
Sbjct: 160 ---GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-------PRIPLKDV 209

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           V +  +         P                     E+   C       RP+ +Q+ +Q
Sbjct: 210 VPRVEKGYKMDA---PDGCPPA-------------VYEVMKNCWHLDAAMRPSFLQLREQ 253

Query: 277 LRQI 280
           L  I
Sbjct: 254 LEHI 257

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.9 bits (230), Expect = 9e-23
 Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 28/189 (14%)

Query: 96  KLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN 155
            L +A +I+SA+ YL     +  + RD+     ++ E ++ ++ DF LS  +        
Sbjct: 117 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA- 172

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
                     + APE      FS KSDV++FG LL E+ T       S +   +  ++ +
Sbjct: 173 -HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM----SPYPGIDLSQVYE 227

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
           L++K    E  +   +                      EL   C   +  DRP+  ++ +
Sbjct: 228 LLEKDYRMERPEGCPEKVY-------------------ELMRACWQWNPSDRPSFAEIHQ 268

Query: 276 QLRQIYQSN 284
               ++Q +
Sbjct: 269 AFETMFQES 277

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 1e-22
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 25/184 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            + A+++A  + YL    S+  + RD+    ++L   ++ ++ DF L  ++P+ + H   
Sbjct: 114 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                  F + APE   T  FS  SD + FG  L E+ T  +  +              +
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQI 223

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           + K               + +EG   P  E        +  +C +    DRPT V +   
Sbjct: 224 LHK---------------IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 268

Query: 277 LRQI 280
           L + 
Sbjct: 269 LLEA 272

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 5e-22
 Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 27/180 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            +   ++ + V YLH      +  RDIKP  ++L E +  ++ DF L+            
Sbjct: 106 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL- 161

Query: 157 SNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
            N++ GT  ++APE     +F +E  DV+S G +L  +L G+                 D
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE---LPWDQPSDSCQEYSD 218

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK 275
             +K      +K+I    +                    L  K L E+   R TI  + K
Sbjct: 219 WKEKKTYLNPWKKIDSAPL-------------------ALLHKILVENPSARITIPDIKK 259

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 9e-22
 Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 29/179 (16%)

Query: 97  LKIAIEIASAVAYLH--VGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI 154
           L++  ++  A+   H        V+ RD+KP  + L  +   +L DF L+  +    +  
Sbjct: 112 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF- 170

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
             +   +GT  +M+PE      ++EKSD++S G LL EL        +    +       
Sbjct: 171 --AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------- 221

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
             +   I    F+ I  P    +E               E+  + L+  +  RP++ ++
Sbjct: 222 --LAGKIREGKFRRI--PYRYSDE-------------LNEIITRMLNLKDYHRPSVEEI 263

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 1e-21
 Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 30/178 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHIN 155
                +I   + +LH   + P++ RD+K   I +       ++ D  L+           
Sbjct: 115 RSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK-- 171

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
               VIGT  FMAPE      + E  DVY+FG  +LE+ T +      + +     ++  
Sbjct: 172 ---AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYP----YSECQNAAQIYR 223

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
            V   ++  SF ++  P +                   E+   C+ +++ +R +I  +
Sbjct: 224 RVTSGVKPASFDKVAIPEVK------------------EIIEGCIRQNKDERYSIKDL 263

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.2 bits (223), Expect = 1e-21
 Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 30/186 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           L  A ++A  + YL     +  + RD+    I++ E  VA++ DF LS            
Sbjct: 130 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK--- 183

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                    +MA E      ++  SDV+S+G LL E+++     Y             +L
Sbjct: 184 -TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAEL 235

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
            +K  +    ++ ++            ++        +L  +C  E   +RP+  Q+   
Sbjct: 236 YEKLPQGYRLEKPLN----------CDDE------VYDLMRQCWREKPYERPSFAQILVS 279

Query: 277 LRQIYQ 282
           L ++ +
Sbjct: 280 LNRMLE 285

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 5e-21
 Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 28/177 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
             +  E   A+ +LH   S  V+ RDIK   I+L  +   +L DF     I   ++    
Sbjct: 119 AAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--- 172

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
            + ++GT  +MAPE  T   +  K D++S G + +E++ G+       + +    R   L
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP-----YLNENPLRALYL 227

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
               I      E+ +P  +                  +   +CL      R +  ++
Sbjct: 228 ----IATNGTPELQNPEKLSAI-------------FRDFLNRCLDMDVEKRGSAKEL 267

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (214), Expect = 2e-20
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 27/184 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A ++A  + YL    S+  + RD+    +++ E+NV ++ DF L+  I   + +   
Sbjct: 138 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK- 193

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +        +MAPE      ++ +SDV+SFG LL E+ T       S +       L  L
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG----SPYPGVPVEELFKL 249

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           +K+    +      +                       +   C       RPT  Q+ + 
Sbjct: 250 LKEGHRMDKPSNCTNELY-------------------MMMRDCWHAVPSQRPTFKQLVED 290

Query: 277 LRQI 280
           L +I
Sbjct: 291 LDRI 294

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 5e-20
 Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 28/186 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +  A ++++A+AYL    S+  V RDI    +++   +  +L DF LS  + +   +   
Sbjct: 111 ILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-- 165

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +++      +MAPE      F+  SDV+ FG  + E+L      +       +  +  D+
Sbjct: 166 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF-------QGVKNNDV 218

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           + +    E                M P     L     L  KC +     RP   ++  Q
Sbjct: 219 IGRIENGERLP-------------MPPNCPPTLY---SLMTKCWAYDPSRRPRFTELKAQ 262

Query: 277 LRQIYQ 282
           L  I +
Sbjct: 263 LSTILE 268

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.4 bits (208), Expect = 1e-19
 Identities = 34/186 (18%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
           +++  +   A+ + H      ++ RD+KP  I++   N  ++ DF ++ +I +    +  
Sbjct: 114 IEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 170

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +  VIGT  +++PE         +SDVYS G +L E+LTG+       F          +
Sbjct: 171 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP-----FTGDSP---VSV 222

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-TIVQVAK 275
             +++  +          +  +                +  K L+++  +R  T  ++  
Sbjct: 223 AYQHVREDPIPPSARHEGLSAD-------------LDAVVLKALAKNPENRYQTAAEMRA 269

Query: 276 QLRQIY 281
            L +++
Sbjct: 270 DLVRVH 275

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (205), Expect = 3e-19
 Identities = 35/182 (19%), Positives = 61/182 (33%), Gaps = 33/182 (18%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
             +  +   A+ YLH      ++ RD+K   I+   +   +L DF +S            
Sbjct: 113 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--- 166

Query: 157 SNRVIGTFGFMAPEY-----RTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY 211
            +  IGT  +MAPE           +  K+DV+S G  L+E+   +         +    
Sbjct: 167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE-----PPHHELNPM 221

Query: 212 RLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIV 271
           R+       I       +  P+                    +   KCL ++   R T  
Sbjct: 222 RVL----LKIAKSEPPTLAQPSRWSSN-------------FKDFLKKCLEKNVDARWTTS 264

Query: 272 QV 273
           Q+
Sbjct: 265 QL 266

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 5e-19
 Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 37/277 (13%)

Query: 9   KSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLF 68
           K++ +A   +  +   + L E  +      H+ +R          T       VIM+ + 
Sbjct: 56  KTVNEAASMRERI---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTL------VIMELMT 106

Query: 69  YKLYKGFLQDRPISVMKFEDTFPFSVSKLK-IAIEIASAVAYLHVGFSRPVVSRDIKPTT 127
               K +L+    ++       P S+SK+  +A EIA  +AYL+   +   V RD+    
Sbjct: 107 RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARN 163

Query: 128 IVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFG 187
            ++ E+   ++ DF ++  I E + +     + +    +M+PE    G F+  SDV+SFG
Sbjct: 164 CMVAEDFTVKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 222

Query: 188 ALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQ 247
            +L E+ T  +  Y       +    + +++  +E                    P+   
Sbjct: 223 VVLWEIATLAEQPY-------QGLSNEQVLRFVMEGGLLD--------------KPDNCP 261

Query: 248 QLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN 284
            +L   EL   C   +   RP+ +++   +++  +  
Sbjct: 262 DMLF--ELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 80.4 bits (198), Expect = 4e-18
 Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 36/180 (20%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
             +       +AYLH   S  ++ RD+K   I+L E  + +L DF  +       + +  
Sbjct: 118 AAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA-------SIMAP 167

Query: 157 SNRVIGTFGFMAPEY---RTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
           +N  +GT  +MAPE       G +  K DV+S G   +EL   K   +        +   
Sbjct: 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--------NMNA 219

Query: 214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
              +    +NES                W E              CL +   DRPT   +
Sbjct: 220 MSALYHIAQNESPALQSGH---------WSEY------FRNFVDSCLQKIPQDRPTSEVL 264

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.9 bits (196), Expect = 5e-18
 Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 27/195 (13%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE---NVAQLFDFTLSLSIPEGETH 153
           L +A ++ S + Y+H   S+  + RD+KP   ++      N+  + DF L+    +  TH
Sbjct: 106 LLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162

Query: 154 IND----SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGE 209
            +     +  + GT  + +       + S + D+ S G +L+    G             
Sbjct: 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-- 220

Query: 210 DYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT 269
                   ++  E  S K++  P  V  +G  +P +    L        C S    D+P 
Sbjct: 221 -------KRQKYERISEKKMSTPIEVLCKG--YPSEFATYLN------FCRSLRFDDKPD 265

Query: 270 IVQVAKQLRQIYQSN 284
              + +  R ++   
Sbjct: 266 YSYLRQLFRNLFHRQ 280

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 6e-18
 Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 11/180 (6%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
             +  ++   + +LH   S  VV RD+KP  I++      +L DF L+            
Sbjct: 119 KDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--- 172

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
              V+ T  + APE      ++   D++S G +  E+   K + +    D  +  ++ D+
Sbjct: 173 -TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL-FRGSSDVDQLGKILDV 230

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLI---CTELAFKCLSESEGDRPTIVQV 273
           +    E +  +++  P          P ++    I     +L  KCL+ +   R +    
Sbjct: 231 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 2e-17
 Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 29/177 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
                EI SA+ YLH    + ++ RD+KP  I+L E+   Q+ DF  +  +   E+    
Sbjct: 111 RFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA-KVLSPESKQAR 166

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +N  +GT  +++PE  T     + SD+++ G ++ +L+ G        F  G +Y +   
Sbjct: 167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL-----PPFRAGNEYLIFQK 221

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
           + K      F E   P                     +L  K L      R    ++
Sbjct: 222 IIK--LEYDFPEKFFPK------------------ARDLVEKLLVLDATKRLGCEEM 258

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 77.2 bits (189), Expect = 5e-17
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 29/197 (14%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-----ENVAQLFDFTLSLSIPEGE 151
              A ++ + V  +H    + +V RDIKP   ++        N+  + DF +     +  
Sbjct: 104 AMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160

Query: 152 T----HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDD 207
           T       +   + GT  +M+       + S + D+ + G + +  L G           
Sbjct: 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL--PWQGLKA 218

Query: 208 GEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDR 267
             + +  + + +  ++   +E+            +PE+  + +          + +    
Sbjct: 219 ATNKQKYERIGEKKQSTPLRELCAG---------FPEEFYKYM------HYARNLAFDAT 263

Query: 268 PTIVQVAKQLRQIYQSN 284
           P    +     ++ +  
Sbjct: 264 PDYDYLQGLFSKVLERL 280

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 76.3 bits (187), Expect = 1e-16
 Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 30/179 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVAQLFDFTLSLSIPEGETHI 154
           ++   ++   + ++H       V  D+KP  I+   +  N  +L DF L+  +   ++  
Sbjct: 127 VEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 183

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                  GT  F APE          +D++S G L   LL+G      S F    D    
Sbjct: 184 V----TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL-----SPFGGENDDETL 234

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
             VK    + +  +     I  +                +   K L      R TI Q 
Sbjct: 235 RNVKS--CDWNMDDSAFSGISED--------------GKDFIRKLLLADPNTRMTIHQA 277

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 74.7 bits (183), Expect = 3e-16
 Identities = 36/183 (19%), Positives = 64/183 (34%), Gaps = 34/183 (18%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            KI   +   +  LH      +V RD+KP  I+L ++   +L DF  S  +  GE     
Sbjct: 113 RKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--- 166

Query: 157 SNRVIGTFGFMAPEYRTTGD------FSEKSDVYSFGALLLELLTGKKISYSSHFDDGED 210
              V GT  ++APE            + ++ D++S G ++  LL G        F   + 
Sbjct: 167 -REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP-----FWHRKQ 220

Query: 211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTI 270
             +  ++          E  D          + +  + L+       + L      R T 
Sbjct: 221 MLMLRMIMSGNYQFGSPEWDD----------YSDTVKDLVS------RFLVVQPQKRYTA 264

Query: 271 VQV 273
            + 
Sbjct: 265 EEA 267

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 1e-15
 Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 25/272 (9%)

Query: 9   KSLEKAEKRKFMLGNGKILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLF 68
           K +   E + +     + L E  I       N I     D ++  T +      ++  L 
Sbjct: 39  KKISPFEHQTYCQ---RTLREIKILLRFRHENIIGIN--DIIRAPTIEQMKDVYLVTHLM 93

Query: 69  YKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTI 128
                  L+ + +S                   +I   + Y+H   S  V+ RD+KP+ +
Sbjct: 94  GADLYKLLKTQHLSNDH----------ICYFLYQILRGLKYIH---SANVLHRDLKPSNL 140

Query: 129 VLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFG 187
           +L      ++ DF L+        H       + T  + APE       +++  D++S G
Sbjct: 141 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 200

Query: 188 ALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQ 247
            +L E+L+ + I    H+ D  ++ L  L     E+ +    +             +   
Sbjct: 201 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW 260

Query: 248 QLLI------CTELAFKCLSESEGDRPTIVQV 273
             L         +L  K L+ +   R  + Q 
Sbjct: 261 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 72.0 bits (176), Expect = 5e-15
 Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 30/179 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL--QEENVAQLFDFTLSLSIPEGETHI 154
           +    +    + ++H      +V  DIKP  I+   ++ +  ++ DF L+  +   E   
Sbjct: 130 INYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV- 185

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                   T  F APE          +D+++ G L   LL+G        F   +D    
Sbjct: 186 ---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP-----FAGEDDLETL 237

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
             VK+   +  F E    ++  E                +     L +    R T+   
Sbjct: 238 QNVKR--CDWEFDEDAFSSVSPE--------------AKDFIKNLLQKEPRKRLTVHDA 280

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 6e-15
 Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 20/185 (10%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
              +     + YLH      ++ RD+KP  ++L E  V +L DF L+ S           
Sbjct: 104 AYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT-- 158

Query: 158 NRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
              + T  + APE       +    D+++ G +L ELL               D      
Sbjct: 159 -HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF-----LPGDSDLDQLTR 212

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLI--------CTELAFKCLSESEGDRP 268
           + + +   + ++  D   + +           L            +L       +   R 
Sbjct: 213 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI 272

Query: 269 TIVQV 273
           T  Q 
Sbjct: 273 TATQA 277

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 1e-14
 Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 31/180 (17%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
              A EI   + +LH   S+ +V RD+K   I+L ++   ++ DF +      G+   N 
Sbjct: 106 TFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN- 161

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
                GT  ++APE      ++   D +SFG LL E+L G+     S F   ++  L   
Sbjct: 162 --TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ-----SPFHGQDEEELFHS 214

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ 276
           ++   +N  +   ++                      +L  K        R  +    +Q
Sbjct: 215 IRM--DNPFYPRWLEKE------------------AKDLLVKLFVREPEKRLGVRGDIRQ 254

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 2e-14
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 30/179 (16%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ--LFDFTLSLSIPEGETHI 154
           +    ++  A+ +LH   S  +   DI+P  I+ Q    +   + +F  +  +  G+   
Sbjct: 105 VSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF- 160

Query: 155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                +     + APE       S  +D++S G L+  LL+G        F    + ++ 
Sbjct: 161 ---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP-----FLAETNQQII 212

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
           + +       +F E     I  E                +   + L +    R T  + 
Sbjct: 213 ENIMN--AEYTFDEEAFKEISIE--------------AMDFVDRLLVKERKSRMTASEA 255

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.4 bits (169), Expect = 3e-14
 Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 34/186 (18%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
              A EI   + ++H   +R VV RD+KP  I+L E    ++ D  L+    + + H   
Sbjct: 110 RFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH--- 163

Query: 157 SNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
               +GT G+MAPE    G  +   +D +S G +L +LL G        F   +     +
Sbjct: 164 --ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS-----PFRQHKTKDKHE 216

Query: 216 LVKKYIENE-SFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV- 273
           + +  +       +   P                      L    L      R   +   
Sbjct: 217 IDRMTLTMAVELPDSFSPE------------------LRSLLEGLLQRDVNRRLGCLGRG 258

Query: 274 AKQLRQ 279
           A+++++
Sbjct: 259 AQEVKE 264

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.0 bits (168), Expect = 4e-14
 Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 14/123 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
              A E+  A+ YLH   S+ ++ RD+KP  I+L +    ++ DF  +  +P+       
Sbjct: 107 KFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY---- 159

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
              + GT  ++APE  +T  +++  D +SFG L+ E+L G        F D    +  + 
Sbjct: 160 --TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT-----PFYDSNTMKTYEK 212

Query: 217 VKK 219
           +  
Sbjct: 213 ILN 215

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 4e-14
 Identities = 26/181 (14%), Positives = 58/181 (32%), Gaps = 10/181 (5%)

Query: 98  KIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS 157
               ++   + + H    R V+ RD+KP  +++      +L +F L+ +          S
Sbjct: 105 SFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC--YS 159

Query: 158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV 217
             V+  +            +S   D++S G +  EL    +  +  +  D +  R+  L+
Sbjct: 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219

Query: 218 KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLI-----CTELAFKCLSESEGDRPTIVQ 272
               E +       P                ++        +L    L  +   R +  +
Sbjct: 220 GTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279

Query: 273 V 273
            
Sbjct: 280 A 280

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 6e-14
 Identities = 29/187 (15%), Positives = 62/187 (33%), Gaps = 21/187 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
                ++   +A+ H   S  V+ RD+KP  +++  E   +L DF L+ +          
Sbjct: 105 KSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161

Query: 157 SNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
               + T  + APE       +S   D++S G +  E++T + +     F    +     
Sbjct: 162 ---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-----FPGDSEIDQLF 213

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLI---------CTELAFKCLSESEGD 266
            + + +             + +    +P+  +Q               L  + L      
Sbjct: 214 RIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 273

Query: 267 RPTIVQV 273
           R +    
Sbjct: 274 RISAKAA 280

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 1e-13
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 17/185 (9%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHIN 155
                ++  ++AY+H   S  +  RDIKP  ++L  +  V +L DF  +  +  GE +++
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

Query: 156 DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
               +   +           D++   DV+S G +L ELL G+ I       D     ++ 
Sbjct: 182 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238

Query: 216 LVKKYIE-----NESFKEIVDPAIVGE--EGLMWPEKEQQLLICTELAFKCLSESEGDRP 268
           L     E     N ++ E   P I       +  P    + +    L  + L  +   R 
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI---ALCSRLLEYTPTARL 295

Query: 269 TIVQV 273
           T ++ 
Sbjct: 296 TPLEA 300

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 3e-13
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 27/180 (15%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGETH 153
            +I   I  A+ YLH   S  +  RD+KP  ++    +   + +L DF  +       + 
Sbjct: 114 SEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 170

Query: 154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
                    T  ++APE      + +  D++S G ++  LL G        F       +
Sbjct: 171 ----TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY-----PPFYSNHGLAI 221

Query: 214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
              +K  I    ++              W E  +++     L    L      R TI + 
Sbjct: 222 SPGMKTRIRMGQYEFPNPE---------WSEVSEEVK---MLIRNLLKTEPTQRMTITEF 269

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 65.3 bits (158), Expect = 5e-13
 Identities = 41/216 (18%), Positives = 75/216 (34%), Gaps = 9/216 (4%)

Query: 62  VIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSR 121
           VI       L    L      ++   +    SV+     +++ + +AY H    R V+ R
Sbjct: 68  VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124

Query: 122 DIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKS 181
           D+KP  +++  E   ++ DF L+ +           + ++  +         +  +S   
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYT--HEIVTLWYRAPDVLMGSKKYSTTI 182

Query: 182 DVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLV---KKYIENESFKEIVDPAIVGEE 238
           D++S G +  E++ G  +       D      + L     K   N +     DP     E
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242

Query: 239 GLMWPEKEQQL-LICTELAFKCLSESEGDRPTIVQV 273
            L W    + L     +L  K L      R T  Q 
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 1e-12
 Identities = 40/181 (22%), Positives = 62/181 (34%), Gaps = 32/181 (17%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQ----LFDFTLSLSIPEGET 152
            +   +I + V YLH   S  +   D+KP  I+L + NV +    + DF L+  I  G  
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172

Query: 153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYR 212
                  + GT  F+APE         ++D++S G +   LL+G            E   
Sbjct: 173 F----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLA 226

Query: 213 LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQ 272
               V    E+E F      A                    +   + L +    R TI  
Sbjct: 227 NVSAVNYEFEDEYFSNTSALAK-------------------DFIRRLLVKDPKKRMTIQD 267

Query: 273 V 273
            
Sbjct: 268 S 268

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 1e-12
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 11/121 (9%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
              EI SA+ YLH   SR VV RDIK   ++L ++   ++ DF L               
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MK 163

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
              GT  ++APE     D+    D +  G ++ E++ G+       F + +  RL +L+ 
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-----LPFYNQDHERLFELIL 218

Query: 219 K 219
            
Sbjct: 219 M 219

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 2e-12
 Identities = 36/259 (13%), Positives = 81/259 (31%), Gaps = 23/259 (8%)

Query: 26  ILLEKLIASSNGKHNPIRSFSADELKTATDDFDGGKVIMKCLFYKLYKGFLQDRPISVMK 85
            L E  I       N +        K +  +   G + +   F +     L    +    
Sbjct: 56  ALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 115

Query: 86  FEDTFPFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSL 145
             +         ++   + +    L+      ++ RD+K   +++  + V +L DF L+ 
Sbjct: 116 LSEI-------KRVMQMLLNG---LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 165

Query: 146 SIPEGE-THINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSS 203
           +    + +  N     + T  +  PE      D+    D++  G ++ E+ T   I   +
Sbjct: 166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 225

Query: 204 HFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLI---------CTE 254
              +     L   +   I  E +  + +  +  +  L+  +K +               +
Sbjct: 226 --TEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 283

Query: 255 LAFKCLSESEGDRPTIVQV 273
           L  K L      R      
Sbjct: 284 LIDKLLVLDPAQRIDSDDA 302

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.1 bits (153), Expect = 4e-12
 Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 31/180 (17%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL---QEENVAQLFDFTLSLSIPEGETH 153
            ++  ++  AV YLH      +V RD+KP  ++     E++   + DF LS     G   
Sbjct: 110 SRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166

Query: 154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRL 213
               +   GT G++APE      +S+  D +S G +   LL G        F D  D +L
Sbjct: 167 ----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP-----FYDENDAKL 217

Query: 214 QDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
            + + K      F       I                   +     + +    R T  Q 
Sbjct: 218 FEQILK--AEYEFDSPYWDDISDS--------------AKDFIRHLMEKDPEKRFTCEQA 261

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 8e-12
 Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 41/179 (22%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVL-QEENVAQLFDFTLSLSIPEGETHIN 155
                ++  AV + H   +  V+ RDIK   I++       +L DF     + +      
Sbjct: 113 RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-----T 164

Query: 156 DSNRVIGTFGFMAPEY-RTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
                 GT  +  PE+ R        + V+S G LL +++ G        F+  E+    
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-----IPFEHDEEIIRG 219

Query: 215 DLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV 273
            +         F++ V                     C  L   CL+    DRPT  ++
Sbjct: 220 QVF--------FRQRVSSE------------------CQHLIRWCLALRPSDRPTFEEI 252

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.2 bits (145), Expect = 4e-11
 Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 9/101 (8%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
              A +I     YLH   S  ++ RD+KP  +++ ++   Q+ DF  +      +     
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGR 194

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
           +  + GT   +APE   +  +++  D ++ G L+ E+  G 
Sbjct: 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 1e-10
 Identities = 37/194 (19%), Positives = 74/194 (38%), Gaps = 24/194 (12%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
             +  ++   + +LH   S  ++ RD+KP+ IV++ +   ++ DF L+ +          
Sbjct: 122 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--- 175

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK-------------KISYSS 203
               + T  + APE      + E  D++S G ++ E++  K             K+    
Sbjct: 176 -TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234

Query: 204 HFDDGEDYR-LQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTE---LAFKC 259
                E  + LQ  V+ Y+EN      +    +  + L   + E   L  ++   L  K 
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294

Query: 260 LSESEGDRPTIVQV 273
           L      R ++   
Sbjct: 295 LVIDPAKRISVDDA 308

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 3e-10
 Identities = 35/182 (19%), Positives = 57/182 (31%), Gaps = 22/182 (12%)

Query: 99  IAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSN 158
           + I +   V  L       ++ RDIK   I+L       L DF LS      ET      
Sbjct: 131 VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 190

Query: 159 RVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVK 218
                +              +  D +S G L+ ELLTG      S F    +   Q  + 
Sbjct: 191 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA-----SPFTVDGEKNSQAEIS 245

Query: 219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQV-AKQL 277
           + I                    +P++   L    +L  + L +    R       A ++
Sbjct: 246 RRILKSEPP--------------YPQEMSALAK--DLIQRLLMKDPKKRLGCGPRDADEI 289

Query: 278 RQ 279
           ++
Sbjct: 290 KE 291

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 5e-10
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
             +  ++   + Y+H   +  ++ RD+KP  + + E+   ++ DF L+           +
Sbjct: 124 QFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS------E 174

Query: 157 SNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQD 215
               + T  + APE       +++  D++S G ++ E++TGK         D  D   + 
Sbjct: 175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK---TLFKGSDHLDQLKEI 231

Query: 216 LVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLL---------ICTELAFKCLSESEGD 266
           +         F + +            PE E++           +   L  K L      
Sbjct: 232 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ 291

Query: 267 RPTIVQV 273
           R T  + 
Sbjct: 292 RVTAGEA 298

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.0 bits (136), Expect = 6e-10
 Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 2/101 (1%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
            +I+ ++   + Y+H      ++  DIKP  ++++  +  +         +     +   
Sbjct: 128 KQISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 185

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGK 197
               I T  + +PE      +   +D++S   L+ EL+TG 
Sbjct: 186 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 56.8 bits (136), Expect = 6e-10
 Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 22/192 (11%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHIN 155
                EI  A+ Y H   S  ++ RD+KP  +++  E+   +L D+ L+     G+ +  
Sbjct: 132 RFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-- 186

Query: 156 DSNRVIGTFGFMAPE-YRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQ 214
             N  + +  F  PE       +    D++S G +L  ++  K+  +  H +  +  R+ 
Sbjct: 187 --NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244

Query: 215 DLV-----------KKYIENESFKEIVDPAIVGEEGLMWPEKEQQLL--ICTELAFKCLS 261
            ++                +  F +I+              + Q L+     +   K L 
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304

Query: 262 ESEGDRPTIVQV 273
                R T  + 
Sbjct: 305 YDHQSRLTAREA 316

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 4e-07
 Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 14/183 (7%)

Query: 97  LKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIND 156
             +  +I   + Y+H   S  ++ RD+KP+ + + E+   ++ DF L+       T    
Sbjct: 124 QFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEM 175

Query: 157 SNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL 216
           +  V   +            +++  D++S G ++ ELLTG+ +   +   D     L+ +
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235

Query: 217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLI------CTELAFKCLSESEGDRPTI 270
                E              +     P+     +         +L  K L      R T 
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295

Query: 271 VQV 273
            Q 
Sbjct: 296 AQA 298

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 21/138 (15%), Positives = 50/138 (36%), Gaps = 18/138 (13%)

Query: 61  KVIMKCLFYKLYKGFLQDRPISVMKFEDTFPFSVSKL----KIAIEIASAVAYLHVGFSR 116
           + + K     + K +  +    +M+  D       ++    ++   I   VA  +    R
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY---HR 122

Query: 117 PVVSRDIKPTTIVLQEENVAQLFDFTLSLSI--PEGETHINDSNRVIGTFGFMAPEYRTT 174
            +V  D+    +++ EE +  + DF  S+ +        +    R I T+      +   
Sbjct: 123 GIVHGDLSQYNVLVSEEGI-WIIDFPQSVEVGEEGWREILERDVRNIITY------FS-- 173

Query: 175 GDFSEKSDVYSFGALLLE 192
             +  + D+ S    +L+
Sbjct: 174 RTYRTEKDINSAIDRILQ 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	284
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.85
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.52
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.11
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.28
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.92
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.09
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	80.81

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-48  Score=323.54  Aligned_cols=206  Identities=24%  Similarity=0.361  Sum_probs=152.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC------------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT------------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------------------------------------------~~   91 (284)
                      .++|...+.||+|+||+||+|++.+ .||||++...                                          +|
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~   85 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWC   85 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred             cccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecC
Confidence            3678889999999999999999865 4999998644                                          11


Q ss_pred             Cc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 FS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      ..                ..++.++.||+.||+|||   +++||||||||+|||++.++.+||+|||+|+......... 
T Consensus        86 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~-  161 (276)
T d1uwha_          86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH-  161 (276)
T ss_dssp             CEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC---------
T ss_pred             CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc-
Confidence            11                567889999999999999   8999999999999999999999999999998765432221 


Q ss_pred             CCCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ......||+.|||||++.+   ..++.++|||||||++|||+||+.||....    ....+...+.    .+...    +
T Consensus       162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~----~~~~~~~~~~----~~~~~----p  229 (276)
T d1uwha_         162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN----NRDQIIFMVG----RGYLS----P  229 (276)
T ss_dssp             ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC----CHHHHHHHHH----HTSCC----C
T ss_pred             cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC----hHHHHHHHHh----cCCCC----C
Confidence            1223679999999999864   358999999999999999999999986432    1111111111    11111    1


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .+..       ....+++.+.+|+.+||+.||++|||+.||++.|+.|.++
T Consensus       230 ~~~~-------~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         230 DLSK-------VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             CGGG-------SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cchh-------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            0000       0122344588999999999999999999999999998764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-48  Score=319.13  Aligned_cols=202  Identities=20%  Similarity=0.324  Sum_probs=148.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CCCc
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FPFS   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~~~   93 (284)
                      ++|+..+.||+|+||+||+|.+ ++..||||++...                                        +|..
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~   84 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   84 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCC
Confidence            3567778999999999999999 7788999998765                                        1111


Q ss_pred             ----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           94 ----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        94 ----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                      ..++.++.|||.||.|||   +.+|+||||||+|||++.++.+||+|||+++........... 
T Consensus        85 g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~-  160 (263)
T d1sm2a_          85 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-  160 (263)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred             CcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCceeec-
Confidence                            567789999999999999   999999999999999999999999999999877554332222 


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                       ...||+.|+|||++.+..++.++|||||||++|||+|+..|++...    .   .............   ...      
T Consensus       161 -~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~----~---~~~~~~~i~~~~~---~~~------  223 (263)
T d1sm2a_         161 -GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR----S---NSEVVEDISTGFR---LYK------  223 (263)
T ss_dssp             -----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC----C---HHHHHHHHHHTCC---CCC------
T ss_pred             -ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC----C---HHHHHHHHHhcCC---CCC------
Confidence             2578999999999999999999999999999999999766654321    1   1222222111110   001      


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                             +..++..+.+|+.+||+.||++|||++||++.|++|.++.
T Consensus       224 -------p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~esg  263 (263)
T d1sm2a_         224 -------PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG  263 (263)
T ss_dssp             -------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -------ccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhCC
Confidence                   1122345789999999999999999999999999999873

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-48  Score=320.45  Aligned_cols=202  Identities=21%  Similarity=0.333  Sum_probs=158.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCCc-
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPFS-   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~~-   93 (284)
                      ++|...+.||+|+||+||+|.+ ++..||||++...                                       +|.. 
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g   92 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENG   92 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCC
Confidence            4667778899999999999999 6678999999755                                       1111 


Q ss_pred             ----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           94 ----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        94 ----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                      ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+.+......... 
T Consensus        93 ~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~-  168 (272)
T d1qpca_          93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-  168 (272)
T ss_dssp             BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT-
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCcccccc-
Confidence                            567899999999999999   899999999999999999999999999999887654433222 


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                       ...||+.|+|||++.+..++.++|||||||++|||+||..|++...       .......... .+...          
T Consensus       169 -~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~-------~~~~~~~~i~-~~~~~----------  229 (272)
T d1qpca_         169 -GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-------TNPEVIQNLE-RGYRM----------  229 (272)
T ss_dssp             -TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-------CHHHHHHHHH-TTCCC----------
T ss_pred             -ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCC-------CHHHHHHHHH-hcCCC----------
Confidence             2578999999999998899999999999999999999777665322       1112222111 11100          


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                           +.+..++..+.+|+.+||+.||++|||++||++.|++++.++
T Consensus       230 -----~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ftst  271 (272)
T d1qpca_         230 -----VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (272)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -----CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhcC
Confidence                 001122345889999999999999999999999999988653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-47  Score=323.80  Aligned_cols=213  Identities=20%  Similarity=0.332  Sum_probs=150.8

Q ss_pred             eecHHHHHHHhcCCCC---------CCeeeecCCceEEEEEe--CCc---ceEEEeecCC--------------------
Q 039895           44 SFSADELKTATDDFDG---------GKVIMKCLFYKLYKGFL--QDR---PISVMKFEDT--------------------   89 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~---------~~~lg~G~~g~Vy~~~~--~~~---~vavK~~~~~--------------------   89 (284)
                      -++++|+.+++.+|+.         .++||+|+||+||+|.+  +++   .||||.+...                    
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   85 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD   85 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence            4567777777766643         46899999999999998  333   5899987654                    


Q ss_pred             ----------------------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 ----------------------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 ----------------------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                                            +|..                ..++.++.||+.||.|||   +++|+||||||+|||++
T Consensus        86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~  162 (299)
T d1jpaa_          86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVN  162 (299)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             CCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEEC
Confidence                                  2211                567889999999999999   89999999999999999


Q ss_pred             cCCcceeeccccccccCCCCcccc--CCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 039895          132 EENVAQLFDFTLSLSIPEGETHIN--DSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDG  208 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~  208 (284)
                      .++.+||+|||+++.+........  ......||+.|+|||++.+..++.++|||||||++|||+| |..||....    
T Consensus       163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~----  238 (299)
T d1jpaa_         163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT----  238 (299)
T ss_dssp             TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----
T ss_pred             CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC----
Confidence            999999999999987754332211  1122457999999999999999999999999999999998 788886432    


Q ss_pred             ccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          209 EDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                          ..+..........                .+.+..++..+.+|+.+||+.||++|||+.||++.|++++++
T Consensus       239 ----~~~~~~~i~~~~~----------------~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         239 ----NQDVINAIEQDYR----------------LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             ----HHHHHHHHHTTCC----------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             ----HHHHHHHHHcCCC----------------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence                1122221111110                011223344588999999999999999999999999998764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-47  Score=319.83  Aligned_cols=203  Identities=21%  Similarity=0.323  Sum_probs=148.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEeC--C----cceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQ--D----RPISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~--~----~~vavK~~~~~---------------------------------------   89 (284)
                      +.|+..++||+|+||+||+|.+.  +    ..||||++...                                       
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            45777889999999999999982  2    36999998654                                       


Q ss_pred             ---CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ---FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ---~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                         +|..                ..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence               1111                567889999999999999   999999999999999999999999999999887654


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      ...........||+.|+|||++.+..++.++|||||||++|||++|..|+....       ......... ..+..    
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~-------~~~~~~~~i-~~~~~----  231 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-------SNHEVMKAI-NDGFR----  231 (283)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-------CHHHHHHHH-HTTCC----
T ss_pred             CccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC-------CHHHHHHHH-hccCC----
Confidence            433333333568999999999999999999999999999999999877765322       111222111 11110    


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                 .+.+..++..+.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       232 -----------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         232 -----------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             -----------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -----------CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence                       011122344588999999999999999999999999998764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=321.41  Aligned_cols=204  Identities=21%  Similarity=0.296  Sum_probs=149.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC-------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT-------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~-------------------------------------   89 (284)
                      -++|...+.||+|+||.||+|.+       +++.||||++...                                     
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            36788889999999999999997       2357999998654                                     


Q ss_pred             -------CCCc-------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -------FPFS-------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -------~~~~-------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                             +|..                               ..++.++.||+.||.|||   +++|+||||||+|||++
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccceeEC
Confidence                   2211                               346789999999999999   99999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCC-CCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK-ISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~-p~~~~~~~~~~~  210 (284)
                      .++.+||+|||+|+......... ......||+.|+|||++.+..++.++|||||||++|||+||.. ||....    ..
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~----~~  243 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK----ID  243 (299)
T ss_dssp             GGGCEEECC------CCSCTTSC-CTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----CS
T ss_pred             CCCcEEEccCcchhhcccccccc-ccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCC----HH
Confidence            99999999999998765443322 2223679999999999999999999999999999999999865 443221    11


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhcC
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQSN  284 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~~  284 (284)
                      ..+..    ....+.....               +...++.+.+|+.+||+.||++|||+.||+++|++++++|
T Consensus       244 ~~~~~----~~~~~~~~~~---------------~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~n  298 (299)
T d1ywna1         244 EEFCR----RLKEGTRMRA---------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  298 (299)
T ss_dssp             HHHHH----HHHHTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHH----HHhcCCCCCC---------------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCC
Confidence            11111    1111111111               1122334889999999999999999999999999999876

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-47  Score=321.51  Aligned_cols=202  Identities=23%  Similarity=0.336  Sum_probs=158.6

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~   91 (284)
                      .++|...+.||+|+||+||+|.+  +|+.||||++...                                        +|
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~   95 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   95 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence            45677788999999999999999  6889999998755                                        22


Q ss_pred             Cc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           92 FS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        92 ~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      ..                 ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+.........
T Consensus        96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (287)
T d1opja_          96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  172 (287)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred             cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence            11                 567789999999999999   8999999999999999999999999999998876544332


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      ..  ...||+.|+|||++.+..++.++|||||||++|||++|..|+....    .   ..... .....+...       
T Consensus       173 ~~--~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~----~---~~~~~-~~i~~~~~~-------  235 (287)
T d1opja_         173 HA--GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----D---LSQVY-ELLEKDYRM-------  235 (287)
T ss_dssp             ET--TEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC----C---HHHHH-HHHHTTCCC-------
T ss_pred             ec--cccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc----h---HHHHH-HHHhcCCCC-------
Confidence            22  2568999999999999999999999999999999999887765422    1   11111 111111100       


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                              +.+..++..+.+|+.+||+.||++|||+.||++.|+.+.++
T Consensus       236 --------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         236 --------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             --------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                    01112334588999999999999999999999999988654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=310.05  Aligned_cols=197  Identities=18%  Similarity=0.261  Sum_probs=156.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC----------------------------------------CCCc
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT----------------------------------------FPFS   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----------------------------------------~~~~   93 (284)
                      ++|+..+.||+|+||+||+|++ +++.||||++...                                        +|..
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~   83 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN   83 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCC
Confidence            6889999999999999999999 6779999998765                                        1111


Q ss_pred             ----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           94 ----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        94 ----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                      ..+.+++.|+++||.|||   +.+|+||||||+|||++.++.+||+|||+++..........  
T Consensus        84 g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~--  158 (258)
T d1k2pa_          84 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS--  158 (258)
T ss_dssp             EEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCC--
T ss_pred             CcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCceee--
Confidence                            567889999999999999   89999999999999999999999999999987765443322  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                      ....||+.|+|||++....++.++|||||||++|||+| |+.||....        ..+..... ..+..  ...     
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~--------~~~~~~~i-~~~~~--~~~-----  222 (258)
T d1k2pa_         159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--------NSETAEHI-AQGLR--LYR-----  222 (258)
T ss_dssp             CCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--------HHHHHHHH-HTTCC--CCC-----
T ss_pred             cccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCC--------HHHHHHHH-HhCCC--CCC-----
Confidence            22578999999999999999999999999999999998 788875432        11112111 11110  001     


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                              +...+..+.+|+.+||+.||++|||+.+|++.|.+|
T Consensus       223 --------p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         223 --------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             --------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             --------cccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence                    112234588999999999999999999999998754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-46  Score=312.48  Aligned_cols=195  Identities=22%  Similarity=0.289  Sum_probs=150.7

Q ss_pred             CeeeecCCceEEEEEe----CCcceEEEeecCC------------------------------------------CCCc-
Q 039895           61 KVIMKCLFYKLYKGFL----QDRPISVMKFEDT------------------------------------------FPFS-   93 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~------------------------------------------~~~~-   93 (284)
                      +.||+|+||+||+|.+    .++.||||++...                                          +|.. 
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            4799999999999987    2467999998643                                          1111 


Q ss_pred             --------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCC
Q 039895           94 --------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNR  159 (284)
Q Consensus        94 --------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  159 (284)
                                    ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.+............
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence                          567899999999999999   899999999999999999999999999999887665444444444


Q ss_pred             cccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCC
Q 039895          160 VIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEE  238 (284)
Q Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
                      ..||+.|+|||++.+..++.++|||||||++|||+| |..||....        ..+... .+..+....          
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~--------~~~~~~-~i~~~~~~~----------  230 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--------GSEVTA-MLEKGERMG----------  230 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHH-HHHTTCCCC----------
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC--------HHHHHH-HHHcCCCCC----------
Confidence            678999999999999999999999999999999998 888886432        111111 111111111          


Q ss_pred             CCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          239 GLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                           .+..++..+.+|+.+||+.||++|||+.+|++.|+....
T Consensus       231 -----~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         231 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -----CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence                 112233458899999999999999999999999988753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=314.79  Aligned_cols=200  Identities=19%  Similarity=0.256  Sum_probs=156.5

Q ss_pred             CCCCCC-eeeecCCceEEEEEe----CCcceEEEeecCC-----------------------------------------
Q 039895           56 DFDGGK-VIMKCLFYKLYKGFL----QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        56 ~f~~~~-~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-----------------------------------------   89 (284)
                      +|...+ .||+|+||+||+|.+    ++..||||++...                                         
T Consensus         9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE   88 (285)
T d1u59a_           9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME   88 (285)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEE
Confidence            344445 499999999999987    3457999998754                                         


Q ss_pred             CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +|.                ...++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.+......
T Consensus        89 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~  165 (285)
T d1u59a_          89 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  165 (285)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             eCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence            111                1567889999999999999   999999999999999999999999999999988765544


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ........||+.|+|||++....++.++|||||||++|||+| |..||....     ...+...+    ..+....    
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-----~~~~~~~i----~~~~~~~----  232 (285)
T d1u59a_         166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GPEVMAFI----EQGKRME----  232 (285)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----THHHHHHH----HTTCCCC----
T ss_pred             cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC-----HHHHHHHH----HcCCCCC----
Confidence            444444678999999999998999999999999999999998 899986432     11122211    1211111    


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                 .+..++..+.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus       233 -----------~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         233 -----------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             -----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----------CCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence                       112233458899999999999999999999999988764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-46  Score=311.16  Aligned_cols=193  Identities=20%  Similarity=0.305  Sum_probs=152.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      +.|...+.||+|+||+||+|..  +|+.||||++...                                         +|
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            3588889999999999999998  7999999998644                                         22


Q ss_pred             Cc--------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           92 FS--------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        92 ~~--------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                      ..              .....++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.+.......   
T Consensus       100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~---  173 (293)
T d1yhwa1         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---  173 (293)
T ss_dssp             TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB---
T ss_pred             CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccc---
Confidence            21              567789999999999999   9999999999999999999999999999998875443222   


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||....        ............. ...        
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~--------~~~~~~~~~~~~~-~~~--------  236 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--------PLRALYLIATNGT-PEL--------  236 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHHCS-CCC--------
T ss_pred             cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCC--------HHHHHHHHHhCCC-CCC--------
Confidence            22679999999999999999999999999999999999999996432        1111111111111 111        


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           +.+...+..+.+|+.+||+.||++|||+.|+++
T Consensus       237 -----~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         237 -----QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             -----SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             -----CCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 011223345889999999999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-46  Score=309.10  Aligned_cols=188  Identities=24%  Similarity=0.361  Sum_probs=150.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +|+.||+|++...                                           
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            5688889999999999999999  7889999998532                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+........
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence             2221               567789999999999999   999999999999999999999999999999876544322


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                           ...||+.|+|||++.+..++.++|||||||++|||++|+.||....        ......... .....      
T Consensus       163 -----~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~-~~~~~------  222 (263)
T d2j4za1         163 -----TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRIS-RVEFT------  222 (263)
T ss_dssp             -----ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH-TTCCC------
T ss_pred             -----ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC--------HHHHHHHHH-cCCCC------
Confidence                 2579999999999999999999999999999999999999996432        122222211 11110      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +          +...++.+.+|+.+||+.||++|||+.|+++
T Consensus       223 ~----------p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         223 F----------PDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             C----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C----------CccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            0          0112334789999999999999999999986

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=309.72  Aligned_cols=195  Identities=21%  Similarity=0.301  Sum_probs=149.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------C
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------F   90 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------~   90 (284)
                      ++|+..+.||+|+||+||+|.+  +|+.||||++...                                          +
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5688889999999999999998  7899999998644                                          2


Q ss_pred             CCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           91 PFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        91 ~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      |..               .....++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+|+.+....... 
T Consensus        85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~-  160 (271)
T d1nvra_          85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-  160 (271)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC-
T ss_pred             cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc-
Confidence            211               567789999999999999   9999999999999999999999999999998775433221 


Q ss_pred             CCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          156 DSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      ......||+.|||||++.+..+ +.++||||+||++|||++|+.||....    .......   ..........      
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~----~~~~~~~---~~~~~~~~~~------  227 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS----DSCQEYS---DWKEKKTYLN------  227 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSS----TTSHHHH---HHHTTCTTST------
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCC----hHHHHHH---HHhcCCCCCC------
Confidence            1223689999999999988876 578999999999999999999996433    1111111   1111111000      


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                               .....+..+.+|+.+||+.||++|||+.|+++
T Consensus       228 ---------~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         228 ---------PWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             ---------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                     01122334779999999999999999999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-46  Score=311.01  Aligned_cols=194  Identities=21%  Similarity=0.260  Sum_probs=140.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5688889999999999999998  7899999998654                                           


Q ss_pred             --CCCc-------------------hhHHHHHHHHHHHHHHhccCC--CCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 --FPFS-------------------VSKLKIAIEIASAVAYLHVGF--SRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 --~~~~-------------------~~~~~i~~~i~~gL~~LH~~~--~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                        +|..                   .....++.||+.||.|||+..  ..+|+||||||+|||++.++.+||+|||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence              2211                   456789999999999999321  13499999999999999999999999999988


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      +.......   ....||+.|+|||++.+..++.++|||||||++|||+||..||....        ..+.... +..+..
T Consensus       164 ~~~~~~~~---~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~--------~~~~~~~-i~~~~~  231 (269)
T d2java1         164 LNHDTSFA---KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--------QKELAGK-IREGKF  231 (269)
T ss_dssp             C--------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHH-HHHTCC
T ss_pred             cccCCCcc---ccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC--------HHHHHHH-HHcCCC
Confidence            75433221   22679999999999999999999999999999999999999986432        1122221 112222


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ..+               +...++.+.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~---------------~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         232 RRI---------------PYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CCC---------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCC---------------CcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            111               1112334889999999999999999999975

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.9e-46  Score=316.67  Aligned_cols=206  Identities=20%  Similarity=0.304  Sum_probs=157.4

Q ss_pred             HHHHHhcCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC--------------------------------
Q 039895           49 ELKTATDDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT--------------------------------   89 (284)
Q Consensus        49 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~--------------------------------   89 (284)
                      +++...++|+..+.||+|+||+||+|++.       +..||||++...                                
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            34445678999999999999999999873       368999998654                                


Q ss_pred             ----------CCC---------------------------------------chhHHHHHHHHHHHHHHhccCCCCCeee
Q 039895           90 ----------FPF---------------------------------------SVSKLKIAIEIASAVAYLHVGFSRPVVS  120 (284)
Q Consensus        90 ----------~~~---------------------------------------~~~~~~i~~~i~~gL~~LH~~~~~~ivH  120 (284)
                                +|.                                       ...++.++.|++.||+|||   +++|||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivH  163 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH  163 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEe
Confidence                      110                                       0357889999999999999   999999


Q ss_pred             cccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCC-C
Q 039895          121 RDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKK-I  199 (284)
Q Consensus       121 rDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~-p  199 (284)
                      |||||+|||++.++.+||+|||+++...+..... ......||+.|+|||++.+..++.++|||||||++|||++|.. |
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p  242 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYK-ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  242 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCcccc-ccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence            9999999999999999999999998765433222 1223578999999999999999999999999999999999975 4


Q ss_pred             CCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          200 SYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      |....        ..+.... +..+.....               +..++..+.+|+.+||+.+|++||||.||++.|++
T Consensus       243 ~~~~~--------~~e~~~~-v~~~~~~~~---------------p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~  298 (301)
T d1lufa_         243 YYGMA--------HEEVIYY-VRDGNILAC---------------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR  298 (301)
T ss_dssp             TTTSC--------HHHHHHH-HHTTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCC--------HHHHHHH-HHcCCCCCC---------------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            43221        1222222 222221111               11223458899999999999999999999999999


Q ss_pred             HHh
Q 039895          280 IYQ  282 (284)
Q Consensus       280 l~~  282 (284)
                      |.+
T Consensus       299 i~~  301 (301)
T d1lufa_         299 MCE  301 (301)
T ss_dssp             TTC
T ss_pred             hcC
Confidence            864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.5e-45  Score=310.06  Aligned_cols=187  Identities=23%  Similarity=0.304  Sum_probs=147.1

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC--------------------------------------------
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT--------------------------------------------   89 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--------------------------------------------   89 (284)
                      .|+..+.||+|+||+||+|..  +|+.||||++...                                            
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            377788999999999999998  7899999998644                                            


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      +|..               ..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||++.......   
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~---  169 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---  169 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC---
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCCCC---
Confidence            2221               567789999999999999   9999999999999999999999999999997754322   


Q ss_pred             cCCCCcccCccccccccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTT---GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                          ...||+.|||||++.+   ..|+.++|||||||++|||++|..||....        ........... ..+....
T Consensus       170 ----~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~--------~~~~~~~i~~~-~~~~~~~  236 (309)
T d1u5ra_         170 ----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQN-ESPALQS  236 (309)
T ss_dssp             ----CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHS-CCCCCSC
T ss_pred             ----ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhC-CCCCCCC
Confidence                2579999999999864   468999999999999999999999986432        11222222111 1111111


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                    ...++.+.+|+.+||+.||++|||+.|+++
T Consensus       237 --------------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         237 --------------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             --------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --------------CCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence                          112234889999999999999999999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-45  Score=312.06  Aligned_cols=200  Identities=21%  Similarity=0.331  Sum_probs=150.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc----ceEEEeecCC---------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR----PISVMKFEDT---------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~----~vavK~~~~~---------------------------------------   89 (284)
                      .+|+..++||+|+||+||+|.+  +|+    .||+|.+...                                       
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            4588889999999999999998  454    5888887643                                       


Q ss_pred             --CC----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 --FP----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 --~~----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                        +|                ....++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++......
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence              11                01567889999999999999   8999999999999999999999999999998876543


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                      .... .....||+.|+|||++.++.++.++|||||||++|||+| |..||....     ...+...+..    +...   
T Consensus       166 ~~~~-~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~-----~~~~~~~i~~----~~~~---  232 (317)
T d1xkka_         166 KEYH-AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILEK----GERL---  232 (317)
T ss_dssp             C---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----GGGHHHHHHH----TCCC---
T ss_pred             cccc-ccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHc----CCCC---
Confidence            3221 122568999999999999999999999999999999999 666665322     1222222221    1100   


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                  +.+..++..+.+|+.+||+.||++|||+.||++.|..+..
T Consensus       233 ------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         233 ------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             ------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------------CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence                        1112233458899999999999999999999999988753

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-45  Score=308.26  Aligned_cols=201  Identities=22%  Similarity=0.316  Sum_probs=151.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCC---------------------------------------CCC--
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT---------------------------------------FPF--   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---------------------------------------~~~--   92 (284)
                      ++|...+.||+|+||+||+|.+ ++..||||++...                                       +|.  
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g   96 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG   96 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTC
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCCC
Confidence            5678888999999999999999 6678999998755                                       111  


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     +..++.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++..........  
T Consensus        97 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~--  171 (285)
T d1fmka3          97 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR--  171 (285)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred             chhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCCceee--
Confidence                           1578899999999999999   89999999999999999999999999999987754433222  


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGE  237 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
                      ....||+.|+|||++....++.++|||||||++|||++|..|+....       ........... +...          
T Consensus       172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~-------~~~~~~~~i~~-~~~~----------  233 (285)
T d1fmka3         172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREVLDQVER-GYRM----------  233 (285)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-------CHHHHHHHHHT-TCCC----------
T ss_pred             ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCC-------CHHHHHHHHHh-cCCC----------
Confidence            22578999999999999999999999999999999999877765422       11222222111 1100          


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          238 EGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                           +.+..++..+.+|+.+||+.||++|||+++|++.|++.+.+
T Consensus       234 -----~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         234 -----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             -----CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence                 11122334588999999999999999999999999987643

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-45  Score=306.87  Aligned_cols=218  Identities=20%  Similarity=0.309  Sum_probs=157.4

Q ss_pred             CCCCCCeeeecCCceEEEEEeCCcceEEEeecCC--------------------------------------------CC
Q 039895           56 DFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT--------------------------------------------FP   91 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~--------------------------------------------~~   91 (284)
                      ++...+.||+|+||+||+|+++|+.||||++...                                            +|
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~   83 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence            3445678999999999999999999999998655                                            11


Q ss_pred             Cc--------------hhHHHHHHHHHHHHHHhccC-----CCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           92 FS--------------VSKLKIAIEIASAVAYLHVG-----FSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        92 ~~--------------~~~~~i~~~i~~gL~~LH~~-----~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      ..              ..++.++.|++.||.|||+.     ..++|+||||||+|||++.++.+||+|||+++.......
T Consensus        84 ~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~  163 (303)
T d1vjya_          84 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD  163 (303)
T ss_dssp             TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT
T ss_pred             cCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCc
Confidence            11              56688999999999999932     136999999999999999999999999999988755433


Q ss_pred             ccc-CCCCcccCccccccccccCC------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC-------ccccHHHHHH
Q 039895          153 HIN-DSNRVIGTFGFMAPEYRTTG------DFSEKSDVYSFGALLLELLTGKKISYSSHFDDG-------EDYRLQDLVK  218 (284)
Q Consensus       153 ~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~-------~~~~~~~~~~  218 (284)
                      ... ......||+.|+|||++...      .++.++|||||||++|||+||..|+........       ....... ..
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  242 (303)
T d1vjya_         164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE-MR  242 (303)
T ss_dssp             EECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH-HH
T ss_pred             ceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHH-HH
Confidence            222 22336799999999998754      267799999999999999999887743221110       0111111 11


Q ss_pred             HHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          219 KYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      ........    +|.+...     .........+.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       243 ~~~~~~~~----~p~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         243 KVVCEQKL----RPNIPNR-----WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHTTSCC----CCCCCGG-----GGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcccc----CCCCCcc-----cCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            11111111    1111110     11334556688999999999999999999999999999764

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=299.78  Aligned_cols=186  Identities=21%  Similarity=0.305  Sum_probs=141.6

Q ss_pred             CCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------------
Q 039895           59 GGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------------   89 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------------   89 (284)
                      ....||+|+||+||+|.+  ++..||+|++...                                               
T Consensus        13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence            345799999999999998  7889999998644                                               


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCC--eeecccccCcEEEe-cCCcceeeccccccccCCCC
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRP--VVSRDIKPTTIVLQ-EENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~Dfg~a~~~~~~~  151 (284)
                      +|..               .....++.||+.||+|||   +++  |+||||||+|||++ .++.+||+|||+++......
T Consensus        93 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~  169 (270)
T d1t4ha_          93 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  169 (270)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             CCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc
Confidence            1111               456789999999999999   777  99999999999996 57899999999997654332


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..     ...||+.|+|||++.+ .++.++|||||||++|||++|+.||....       ......... ..+..+..+ 
T Consensus       170 ~~-----~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~-------~~~~~~~~i-~~~~~~~~~-  234 (270)
T d1t4ha_         170 AK-----AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRRV-TSGVKPASF-  234 (270)
T ss_dssp             BE-----ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHHH-TTTCCCGGG-
T ss_pred             cC-----CcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcc-------cHHHHHHHH-HcCCCCccc-
Confidence            21     2679999999999865 69999999999999999999999986422       111111111 111111111 


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                   +....+.+.+|+.+||+.||++|||+.|+++
T Consensus       235 -------------~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         235 -------------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             -------------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -------------CccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                         1112234789999999999999999999975

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.4e-44  Score=301.72  Aligned_cols=202  Identities=19%  Similarity=0.334  Sum_probs=151.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            5688889999999999999998  7999999998654                                           


Q ss_pred             -----CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -----FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -----~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                           +|..               ...+.++.||+.||.|||   +.+|+||||||+|||++.++..+++|||.+.....
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhhcc
Confidence                 1111               567789999999999999   99999999999999999999999999999877655


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccc-c
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFK-E  228 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  228 (284)
                      ............||+.|+|||++.+..++.++|||||||++|||+||..||....        ............... .
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~~~~~~~~~~~~~~~  235 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--------PVSVAYQHVREDPIPPS  235 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHCCCCCGG
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC--------HHHHHHHHHhcCCCCCc
Confidence            4433333344689999999999999999999999999999999999999996432        122222222222111 1


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-CHHHHHHHHHHHH
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-TIVQVAKQLRQIY  281 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~ev~~~L~~l~  281 (284)
                      ...              ...+..+.+++.+||+.||++|| |++++++.|.++.
T Consensus       236 ~~~--------------~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         236 ARH--------------EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             GTS--------------SSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             hhc--------------cCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            111              12234488999999999999999 8999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-45  Score=305.56  Aligned_cols=200  Identities=22%  Similarity=0.293  Sum_probs=144.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--C---CcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--Q---DRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~---~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|.+  +   +..||||.+...                                        
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~   86 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM   86 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEE
Confidence            4677788999999999999988  2   246889888644                                        


Q ss_pred             -CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 -FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 -~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                       +|..                ..++.++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        87 E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~  163 (273)
T d1mp8a_          87 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  163 (273)
T ss_dssp             ECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred             EeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence             1111                567889999999999999   99999999999999999999999999999987654433


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ....  ...||+.|+|||++.+..++.++|||||||++|||++ |.+||....     ...+...+.    .+....   
T Consensus       164 ~~~~--~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~-----~~~~~~~i~----~~~~~~---  229 (273)
T d1mp8a_         164 YKAS--KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGRIE----NGERLP---  229 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHH----TTCCCC---
T ss_pred             eecc--ceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCC-----HHHHHHHHH----cCCCCC---
Confidence            2222  2568999999999999999999999999999999998 777776432     122222221    111111   


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                  .+..++..+.+|+.+||+.||++|||+.||++.|+.+++.
T Consensus       230 ------------~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         230 ------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             ------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                        1122334588999999999999999999999999998763

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-45  Score=309.79  Aligned_cols=158  Identities=22%  Similarity=0.288  Sum_probs=122.5

Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCCCCcccCccccccccccC
Q 039895           95 SKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTT  174 (284)
Q Consensus        95 ~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  174 (284)
                      .++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+........... ....||+.|||||++.+
T Consensus       165 ~~~~i~~qi~~gl~yLH---~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~  240 (325)
T d1rjba_         165 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR-GNARLPVKWMAPESLFE  240 (325)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEE-TTEEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---hCCeeeccCchhccccccCCeEEEeeccccccccCCCceeee-ccccCCCccCChHHHcC
Confidence            46679999999999999   999999999999999999999999999999876554332211 22568999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHH
Q 039895          175 GDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICT  253 (284)
Q Consensus       175 ~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (284)
                      ..++.++|||||||++|||+| |..||....    ....+...    ...+..               .+.+..++..+.
T Consensus       241 ~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~----~~~~~~~~----~~~~~~---------------~~~p~~~~~~l~  297 (325)
T d1rjba_         241 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIP----VDANFYKL----IQNGFK---------------MDQPFYATEEIY  297 (325)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----CSHHHHHH----HHTTCC---------------CCCCTTCCHHHH
T ss_pred             CCCCcceeccchhHHHHHHHhCCCCCCCCCC----HHHHHHHH----HhcCCC---------------CCCCCcCCHHHH
Confidence            999999999999999999998 888886432    11111111    111110               011122334588


Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHH
Q 039895          254 ELAFKCLSESEGDRPTIVQVAKQLRQ  279 (284)
Q Consensus       254 ~l~~~cl~~~p~~Rps~~ev~~~L~~  279 (284)
                      +|+.+||+.||++|||++||+++|..
T Consensus       298 ~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         298 IIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            99999999999999999999999863

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-45  Score=311.56  Aligned_cols=142  Identities=22%  Similarity=0.297  Sum_probs=122.2

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|+..+.||+|+||+||+|.+  +|..||+|++...                                          
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            46788889999999999999998  7899999998644                                          


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCC-CeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSR-PVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~-~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +|..               .....++.|++.||.|||   ++ +|+||||||+|||++.++.+||+|||+|+.+....  
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--  159 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--  159 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT--
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc--
Confidence            2211               556789999999999999   64 89999999999999999999999999998764322  


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSS  203 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~  203 (284)
                         ....+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus       160 ---~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         160 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             ---C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             ---cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence               12368999999999999999999999999999999999999999754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-45  Score=305.95  Aligned_cols=193  Identities=20%  Similarity=0.226  Sum_probs=148.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      +.|+..+.||+|+||+||+|.+  +|..||||++...                                         +|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            3577778999999999999998  7899999998654                                         22


Q ss_pred             Cc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 FS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                      ..                .....++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+........  
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~--  166 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--  166 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH--
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCccc--
Confidence            11                567789999999999999   999999999999999999999999999999765432111  


Q ss_pred             CCCCcccCcccccccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          156 DSNRVIGTFGFMAPEYRT-----TGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                       .....||+.|+|||++.     ...|+.++|||||||++|||++|..||....     .......+   .. ...+.. 
T Consensus       167 -~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~-----~~~~~~~i---~~-~~~~~~-  235 (288)
T d2jfla1         167 -RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN-----PMRVLLKI---AK-SEPPTL-  235 (288)
T ss_dssp             -HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----GGGHHHHH---HH-SCCCCC-
T ss_pred             -ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCC-----HHHHHHHH---Hc-CCCCCC-
Confidence             12267999999999874     4568999999999999999999999986532     11121111   11 111111 


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  +.+...+..+.+|+.+||+.||++|||+.|+++
T Consensus       236 ------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         236 ------------AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             ------------SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ------------CccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                        111223345889999999999999999999976

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-45  Score=305.63  Aligned_cols=192  Identities=22%  Similarity=0.336  Sum_probs=148.0

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5688889999999999999998  7899999998643                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.|++.||+|||   +.+|+||||||+|||+++++.+||+|||+|+.+......
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence             2221               556789999999999999   999999999999999999999999999999887543222


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                      .. .....||+.|+|||++.+..++.++||||+||++|||++|..||....        ......... .....      
T Consensus       165 ~~-~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--------~~~~~~~i~-~~~~~------  228 (288)
T d1uu3a_         165 AR-ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQKII-KLEYD------  228 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-TTCCC------
T ss_pred             cc-cccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC--------HHHHHHHHH-cCCCC------
Confidence            11 122579999999999999999999999999999999999999996432        111122111 11110      


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      +          +...++.+.+|+.+||+.||++|||+.|+++
T Consensus       229 ~----------p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         229 F----------PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             C----------CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             C----------CccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            0          0112234789999999999999999998754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=298.64  Aligned_cols=195  Identities=23%  Similarity=0.291  Sum_probs=148.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEeCCcceEEEeecCC----------------------------------------CCCc-
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQDRPISVMKFEDT----------------------------------------FPFS-   93 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------------------------------------~~~~-   93 (284)
                      ++|+..+.||+|+||.||+|.+.|..||||+++..                                        +|.. 
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g   86 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   86 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             HHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCC
Confidence            45667789999999999999999999999999765                                        1111 


Q ss_pred             ----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           94 ----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        94 ----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                      ..+++++.||+.||.|||   +.+|+||||||+|||++.++.+|++|||+++........    
T Consensus        87 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~----  159 (262)
T d1byga_          87 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT----  159 (262)
T ss_dssp             EHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCCCcc----
Confidence                            557889999999999999   999999999999999999999999999999876443221    


Q ss_pred             CCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccccC
Q 039895          158 NRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAIVG  236 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
                        ..+|+.|+|||++.+..++.++|||||||++|||+| |..|+...     ....+...+.    .+...         
T Consensus       160 --~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~-----~~~~~~~~i~----~~~~~---------  219 (262)
T d1byga_         160 --GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVE----KGYKM---------  219 (262)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CGGGHHHHHT----TTCCC---------
T ss_pred             --ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHH----cCCCC---------
Confidence              467899999999998999999999999999999999 56665432     2222322221    11111         


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          237 EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                            +.+...++.+.+|+.+||+.||++|||+.+|+++|++|..
T Consensus       220 ------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         220 ------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence                  1112233458899999999999999999999999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-45  Score=309.43  Aligned_cols=194  Identities=20%  Similarity=0.280  Sum_probs=139.7

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||+||+|..  +|+.||||++...                                          
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            35688889999999999999998  7899999998644                                          


Q ss_pred             CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe---cCCcceeeccccccccCCCC
Q 039895           90 FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~Dfg~a~~~~~~~  151 (284)
                      +|..               .....++.||+.||.|||   +.+|+||||||+|||+.   .++.+||+|||+++......
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~  164 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS  164 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence            2221               567789999999999999   99999999999999995   57899999999998765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccc
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVD  231 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
                      ..    ....||+.|||||++.+..++.++|||||||++|||++|..||....        .......... ....    
T Consensus       165 ~~----~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--------~~~~~~~i~~-~~~~----  227 (307)
T d1a06a_         165 VL----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN--------DAKLFEQILK-AEYE----  227 (307)
T ss_dssp             ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHT-TCCC----
T ss_pred             ee----eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC--------HHHHHHHHhc-cCCC----
Confidence            22    12679999999999999999999999999999999999999996432        1111111111 1100    


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                              ...+.....++.+.+|+.+||+.||++|||+.|+++
T Consensus       228 --------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         228 --------FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             --------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --------CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                    000111223345889999999999999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-45  Score=302.63  Aligned_cols=200  Identities=21%  Similarity=0.304  Sum_probs=146.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe---CC--cceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL---QD--RPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~---~~--~~vavK~~~~~----------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|.+   ++  ..||||++...                                        
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            4577778899999999999987   22  36899998754                                        


Q ss_pred             ---CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ---FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ---~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                         +|..                ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.+...
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhcccC
Confidence               1111                567789999999999999   899999999999999999999999999999988665


Q ss_pred             CccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ...........||..|+|||++.+..++.++|||||||++|||+| |..||....        ...........+...  
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~--------~~~~~~~i~~~~~~~--  234 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--------GSQILHKIDKEGERL--  234 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTSCCCC--
T ss_pred             CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC--------HHHHHHHHHhCCCCC--
Confidence            544444444668899999999999999999999999999999998 888886432        222222222221111  


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQI  280 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l  280 (284)
                                   +.+...+..+.+|+.+||+.||++|||+.||++.|++.
T Consensus       235 -------------~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         235 -------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             -------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -------------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                         11112234588999999999999999999999988864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-43  Score=300.52  Aligned_cols=187  Identities=21%  Similarity=0.298  Sum_probs=149.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|+.  +|+.||||++...                                           
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5688889999999999999998  7999999998643                                           


Q ss_pred             -CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|..               .....++.||+.||.|||   +++|+||||||+|||++.+|.+||+|||+|+....... 
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~-  159 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-  159 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC-
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccccc-
Confidence             2211               455678999999999999   99999999999999999999999999999988754332 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                           ...||+.|+|||++.+..++.++||||+||++|||++|..||....        .......... +...  .   
T Consensus       160 -----~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~--------~~~~~~~i~~-~~~~--~---  220 (316)
T d1fota_         160 -----TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILN-AELR--F---  220 (316)
T ss_dssp             -----CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHH-CCCC--C---
T ss_pred             -----cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC--------HHHHHHHHHc-CCCC--C---
Confidence                 2679999999999999999999999999999999999999996532        1222222211 1100  0   


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                                 +...+..+.+++.+||+.||.+||     |++++++
T Consensus       221 -----------p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         221 -----------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             -----------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -----------CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence                       011223478999999999999996     8999875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.4e-44  Score=308.91  Aligned_cols=194  Identities=18%  Similarity=0.165  Sum_probs=152.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .++|...+.||+|+||.||+|..  +|+.||||++...                                         +
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46788889999999999999998  7999999998655                                         2


Q ss_pred             CCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec--CCcceeeccccccccCCCCc
Q 039895           91 PFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE--ENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~--~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |..                .....++.||+.||.|||   +.+|+||||||+|||++.  ++.+||+|||+++.+.....
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence            211                567789999999999999   999999999999999964  57899999999988765433


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (284)
                      ..    ...||+.|||||++.+..++.++|||||||++|||++|..||.+..        ........... ..+..   
T Consensus       182 ~~----~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~---  246 (350)
T d1koaa2         182 VK----VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--------DDETLRNVKSCDWNMDD---  246 (350)
T ss_dssp             EE----EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCSCC---
T ss_pred             cc----eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCc---
Confidence            22    2578999999999999999999999999999999999999996432        12222222111 11111   


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                                 ......+..+.+|+.+||+.||++|||+.|++++
T Consensus       247 -----------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         247 -----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             -----------GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             -----------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                       1111223447899999999999999999999863

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-44  Score=302.30  Aligned_cols=198  Identities=22%  Similarity=0.327  Sum_probs=151.2

Q ss_pred             CCeeeecCCceEEEEEe-C--C--cceEEEeecCC-------------------------------------------CC
Q 039895           60 GKVIMKCLFYKLYKGFL-Q--D--RPISVMKFEDT-------------------------------------------FP   91 (284)
Q Consensus        60 ~~~lg~G~~g~Vy~~~~-~--~--~~vavK~~~~~-------------------------------------------~~   91 (284)
                      .++||+|+||+||+|.+ +  +  ..||||++...                                           +|
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            36899999999999998 2  2  25899998643                                           11


Q ss_pred             Cc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc-
Q 039895           92 FS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI-  154 (284)
Q Consensus        92 ~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-  154 (284)
                      ..                ..++.++.|++.||.|||   +.+|+||||||+|||+++++.+||+|||+++......... 
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            11                567899999999999999   9999999999999999999999999999998875543322 


Q ss_pred             cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccccc
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPAI  234 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
                      .......||+.|+|||++....++.++||||||+++|||+||..||....    ........+    ..+...  ..   
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~----~~~~~~~~i----~~g~~~--~~---  255 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----NTFDITVYL----LQGRRL--LQ---  255 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHH----HTTCCC--CC---
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC----CHHHHHHHH----HcCCCC--CC---
Confidence            12223578999999999999999999999999999999999888876432    111111111    111110  01   


Q ss_pred             cCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          235 VGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                                +..++..+.+|+.+||+.||++|||+.||++.|+.++++
T Consensus       256 ----------p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         256 ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             ----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ----------cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                      112234588999999999999999999999999999865

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-43  Score=299.20  Aligned_cols=208  Identities=17%  Similarity=0.241  Sum_probs=155.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CCC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FPF   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~~   92 (284)
                      +.|...+.||+|+||+||+|.+  +|+.||||++...                                        +|.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            3578889999999999999998  7899999987654                                        111


Q ss_pred             c---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe---cCCcceeeccccccccCCCCccc
Q 039895           93 S---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ---EENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        93 ~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~---~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                      .               ...+.++.|++.||+|||   +++|+||||||+|||++   .+..+||+|||+|+.+.......
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~  163 (299)
T d1ckia_          87 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ  163 (299)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCC
T ss_pred             CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceecccccccc
Confidence            1               667889999999999999   99999999999999986   34579999999999876543221


Q ss_pred             ----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccc
Q 039895          155 ----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIV  230 (284)
Q Consensus       155 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
                          .......||+.|+|||++.+..++.++|||||||++|||++|..||......... ........... ....... 
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~-  240 (299)
T d1ckia_         164 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKM-STPIEVL-  240 (299)
T ss_dssp             BCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--------HHHHHHHHH-HSCHHHH-
T ss_pred             ceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHH-HHHHHhhcccC-CCChhHh-
Confidence                1223467999999999999999999999999999999999999999754311111 11111111110 0110000 


Q ss_pred             cccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          231 DPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                                    ...++.++.+++..||+.+|++||++.++.+.|+++..
T Consensus       241 --------------~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         241 --------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             --------------TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             --------------ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence                          11223458899999999999999999999999988754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=302.59  Aligned_cols=199  Identities=21%  Similarity=0.244  Sum_probs=152.1

Q ss_pred             hcCCCCC-CeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------
Q 039895           54 TDDFDGG-KVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~-~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------   89 (284)
                      .++|... ++||+|+||+||+|.+  +|+.||||++...                                         
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            4677764 4699999999999998  7899999998765                                         


Q ss_pred             CCCc-----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec---CCcceeeccccccccCC
Q 039895           90 FPFS-----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE---ENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 ~~~~-----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~---~~~~kl~Dfg~a~~~~~  149 (284)
                      ||..                 .....++.||+.||.|||   +.+|+||||||+|||++.   ++.+||+|||+++....
T Consensus        90 y~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~  166 (335)
T d2ozaa1          90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  166 (335)
T ss_dssp             CCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred             CCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCccccccccccccccccccccccccccceeeeccC
Confidence            2221                 567789999999999999   999999999999999985   45799999999987765


Q ss_pred             CCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ....    ....||+.|+|||++.+..|+.++|||||||++|+|+||..||.+....     .....+            
T Consensus       167 ~~~~----~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~-----~~~~~~------------  225 (335)
T d2ozaa1         167 HNSL----TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-----AISPGM------------  225 (335)
T ss_dssp             CCCC----CCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------------------
T ss_pred             CCcc----ccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH-----HHHHHH------------
Confidence            4332    2267999999999999999999999999999999999999999653310     000000            


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .............+.....++.+.+|+.+||+.||++|||+.|+++.
T Consensus       226 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         226 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             --CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            00001111111112234456678999999999999999999999863

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-43  Score=306.45  Aligned_cols=191  Identities=20%  Similarity=0.275  Sum_probs=148.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|+.  +|+.||||++...                                           
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            6788899999999999999998  7999999998532                                           


Q ss_pred             ----CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCC
Q 039895           90 ----FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEG  150 (284)
Q Consensus        90 ----~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~  150 (284)
                          +|..               .....++.||+.||.|||   +.+|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence                2211               466789999999999999   999999999999999999999999999999877544


Q ss_pred             CccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc
Q 039895          151 ETHINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI  229 (284)
Q Consensus       151 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
                      ..     ....||+.|+|||++.. ..++.++|||||||++|||+||+.||.....     ........... ....  .
T Consensus       161 ~~-----~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~~~~~~~-~~~~--~  227 (364)
T d1omwa3         161 KP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDRMTL-TMAV--E  227 (364)
T ss_dssp             CC-----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS-----SCHHHHHHHSS-SCCC--C
T ss_pred             cc-----cccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcc-cCCC--C
Confidence            32     22579999999999875 4689999999999999999999999975331     11111111111 1000  0


Q ss_pred             ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          230 VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                      .              +...++.+.+|+.+||+.||++|||     ++|+++
T Consensus       228 ~--------------~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         228 L--------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             C--------------CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             C--------------CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            0              1112234789999999999999999     688865

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-43  Score=304.61  Aligned_cols=187  Identities=17%  Similarity=0.230  Sum_probs=149.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||.||+|.+  +|+.||||++...                                           
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5788889999999999999998  7999999998533                                           


Q ss_pred             -CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 -FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 -~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                       +|.               +.....++.||+.||.|||   +.+||||||||+|||++.++.+||+|||+++.+..... 
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~-  196 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-  196 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC-
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccc-
Confidence             111               1567789999999999999   99999999999999999999999999999988754322 


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDPA  233 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
                           ...||+.|||||++.+..++.++|||||||++|||+||..||....        .......... .....     
T Consensus       197 -----~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~--------~~~~~~~i~~-~~~~~-----  257 (350)
T d1rdqe_         197 -----TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVS-GKVRF-----  257 (350)
T ss_dssp             -----CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-CCCCC-----
T ss_pred             -----cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC--------HHHHHHHHhc-CCCCC-----
Confidence                 2679999999999999999999999999999999999999996432        1222222111 11100     


Q ss_pred             ccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCC-----CHHHHHH
Q 039895          234 IVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRP-----TIVQVAK  275 (284)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~ev~~  275 (284)
                                 +...++.+.+|+.+||+.||.+|+     |+.|+++
T Consensus       258 -----------p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         258 -----------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -----------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -----------CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence                       011223478999999999999994     8999875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-43  Score=300.91  Aligned_cols=191  Identities=23%  Similarity=0.286  Sum_probs=150.9

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .++|+..+.||+|+||.||+|..  +|+.||+|++...                                          
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            36788899999999999999998  8999999998643                                          


Q ss_pred             --CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        +|..               .....++.||+.||.|||   +++|+||||||+|||++.+|.+||+|||+|+.......
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence              2211               456678999999999999   99999999999999999999999999999987654332


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      .   ....+||+.|+|||++.+..|+.++||||+||++|||++|..||....        .......... ....     
T Consensus       161 ~---~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~--------~~~~~~~i~~-~~~~-----  223 (337)
T d1o6la_         161 T---MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILM-EEIR-----  223 (337)
T ss_dssp             C---BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-CCCC-----
T ss_pred             c---cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcC--------HHHHHHHHhc-CCCC-----
Confidence            2   123689999999999999999999999999999999999999997533        1222222111 1110     


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                       +          +...++.+.+|+.+||+.||++||+     +.|+++
T Consensus       224 -~----------p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         224 -F----------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -C----------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -C----------CccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence             0          0112334789999999999999995     788875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-44  Score=300.14  Aligned_cols=193  Identities=20%  Similarity=0.258  Sum_probs=150.7

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5688889999999999999998  7899999998543                                           


Q ss_pred             ----CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC----cceeeccccccc
Q 039895           90 ----FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN----VAQLFDFTLSLS  146 (284)
Q Consensus        90 ----~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~----~~kl~Dfg~a~~  146 (284)
                          +|..               .....++.|++.||.|||   +.+|+||||||+|||++.++    .+|++|||++..
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence                2211               556789999999999999   99999999999999998777    489999999988


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      .......    ....||+.|+|||++.+..++.++|||||||++|||++|..||.+..        ......... ....
T Consensus       167 ~~~~~~~----~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--------~~~~~~~i~-~~~~  233 (293)
T d1jksa_         167 IDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANVS-AVNY  233 (293)
T ss_dssp             CTTSCBC----SCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-TTCC
T ss_pred             cCCCccc----cccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC--------HHHHHHHHH-hcCC
Confidence            7554322    22578999999999999999999999999999999999999997532        111111111 1110


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .            ...+.....+..+.+|+.+||+.||++|||+.|+++
T Consensus       234 ~------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         234 E------------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             C------------CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C------------CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0            000111223445789999999999999999999986

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4e-44  Score=307.80  Aligned_cols=193  Identities=17%  Similarity=0.159  Sum_probs=152.4

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------C
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------F   90 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~   90 (284)
                      .+.|...+.||+|+||.||+|..  +|+.||||++...                                         +
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46788889999999999999998  7999999998654                                         2


Q ss_pred             CC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe--cCCcceeeccccccccCCCCc
Q 039895           91 PF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ--EENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        91 ~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~--~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      |.                +.....++.||+.||.|||   +.+|+||||||+|||++  .++.+||+|||+|..+.....
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~  184 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  184 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCCCc
Confidence            22                1567789999999999999   99999999999999998  578999999999988765433


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc-Cccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN-ESFKEIVD  231 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (284)
                      ...    ..||+.|+|||++.+..++.++||||+||++|||++|..||.+..        ........... ..++..  
T Consensus       185 ~~~----~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~~~~~~~--  250 (352)
T d1koba_         185 VKV----TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--------DLETLQNVKRCDWEFDED--  250 (352)
T ss_dssp             EEE----ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHCCCCCCSS--
T ss_pred             eee----ccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCCcc--
Confidence            221    578999999999999999999999999999999999999996432        11222211111 111110  


Q ss_pred             ccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          232 PAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                  .....+..+.+|+.+||+.||.+|||+.|+++
T Consensus       251 ------------~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         251 ------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             ------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                        01122334789999999999999999999976

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=299.28  Aligned_cols=200  Identities=23%  Similarity=0.303  Sum_probs=149.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CC-------cceEEEeecCC------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QD-------RPISVMKFEDT------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~-------~~vavK~~~~~------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|+.  .+       ..||||++...                                    
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            5677778999999999999987  21       36999998765                                    


Q ss_pred             -------CC-------------------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -------FP-------------------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -------~~-------------------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                             +|                               ....++.++.||+.||+|||   +.+||||||||+|||++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT  169 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceeec
Confidence                   11                               11457899999999999999   99999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLT-GKKISYSSHFDDGED  210 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~ellt-g~~p~~~~~~~~~~~  210 (284)
                      .++.+||+|||+++.......... .....||+.|+|||++.+..|+.++|||||||++|||++ |..||....      
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~------  242 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKK-TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------  242 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCC-CTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred             CCCCeEeccchhhccccccccccc-cccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC------
Confidence            999999999999987765433322 223678999999999999999999999999999999998 566664322      


Q ss_pred             ccHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHh
Q 039895          211 YRLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQ  282 (284)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~  282 (284)
                        ..... ..+..+.....               +...+..+.+|+.+||+.||++|||+.||++.|++|..
T Consensus       243 --~~~~~-~~i~~~~~~~~---------------p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         243 --VEELF-KLLKEGHRMDK---------------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             --HHHHH-HHHHTTCCCCC---------------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHHHH-HHHHcCCCCCC---------------CccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence              11111 12222111110               11223348899999999999999999999999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-43  Score=297.76  Aligned_cols=211  Identities=18%  Similarity=0.228  Sum_probs=150.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--C-CcceEEEeecCC-----------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--Q-DRPISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~-----------------------------------------   89 (284)
                      .++|+..+.||+|+||+||+|.+  + ++.||||++...                                         
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46788889999999999999998  3 567999998532                                         


Q ss_pred             ----------CCCc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeecccc
Q 039895           90 ----------FPFS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTL  143 (284)
Q Consensus        90 ----------~~~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~  143 (284)
                                +|..                .....++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchhh
Confidence                      1110                456679999999999999   99999999999999999999999999999


Q ss_pred             ccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhc
Q 039895          144 SLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIEN  223 (284)
Q Consensus       144 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (284)
                      ++.......    .....||+.|+|||++.+..|+.++||||+||++|||++|+.||....     .......+......
T Consensus       163 ~~~~~~~~~----~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~  233 (305)
T d1blxa_         163 ARIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-----DVDQLGKILDVIGL  233 (305)
T ss_dssp             CCCCCGGGG----GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCC
T ss_pred             hhhhccccc----CCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHhhCC
Confidence            876543322    123679999999999999999999999999999999999999996432     11111111111111


Q ss_pred             C---ccccccc---ccccCCCCC-CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          224 E---SFKEIVD---PAIVGEEGL-MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       224 ~---~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      .   .+.....   ......... .........+.+.+|+.+||+.||++|||+.|+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0   0000000   000000000 000111223457899999999999999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-44  Score=300.68  Aligned_cols=202  Identities=19%  Similarity=0.319  Sum_probs=155.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEeC-------CcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFLQ-------DRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~~-------~~~vavK~~~~~--------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|.+.       +..||||++...                                      
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            56777789999999999999873       468999999754                                      


Q ss_pred             ----CCCc-------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeec
Q 039895           90 ----FPFS-------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFD  140 (284)
Q Consensus        90 ----~~~~-------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  140 (284)
                          +|..                         ..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEee
Confidence                1111                         346789999999999999   89999999999999999999999999


Q ss_pred             cccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          141 FTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       141 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      ||+++.+........ .....||+.|+|||.+.+..++.++|||||||++|||+||..|++...       .........
T Consensus       177 FGla~~~~~~~~~~~-~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-------~~~~~~~~i  248 (308)
T d1p4oa_         177 FGMTRDIYETDYYRK-GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-------SNEQVLRFV  248 (308)
T ss_dssp             TTCCCGGGGGGCEEG-GGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-------CHHHHHHHH
T ss_pred             cccceeccCCcceee-ccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-------CHHHHHHHH
Confidence            999987754433222 223578999999999999999999999999999999999965443211       122222222


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      . .+.....               +..++..+.+|+.+||+.+|++|||+.||++.|++..+.
T Consensus       249 ~-~~~~~~~---------------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~  295 (308)
T d1p4oa_         249 M-EGGLLDK---------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  295 (308)
T ss_dssp             H-TTCCCCC---------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             H-hCCCCCC---------------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            1 2211111               112234588999999999999999999999999987654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-43  Score=294.32  Aligned_cols=204  Identities=18%  Similarity=0.182  Sum_probs=144.8

Q ss_pred             CeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------------CCC
Q 039895           61 KVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------------FPF   92 (284)
Q Consensus        61 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------------~~~   92 (284)
                      ++||+|+||+||+|.+  +|+.||||++...                                              +|.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            5799999999999998  7899999998533                                              111


Q ss_pred             ---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccccCC
Q 039895           93 ---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHINDS  157 (284)
Q Consensus        93 ---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  157 (284)
                                     +.....++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++.........   
T Consensus        84 ~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~---  157 (299)
T d1ua2a_          84 TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY---  157 (299)
T ss_dssp             EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC---
T ss_pred             chHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCcccc---
Confidence                           1567789999999999999   9999999999999999999999999999998765543222   


Q ss_pred             CCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc---cccccccc
Q 039895          158 NRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES---FKEIVDPA  233 (284)
Q Consensus       158 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  233 (284)
                      ....||+.|+|||++... .++.++|||||||++|||++|..||....     .......+........   +.......
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~-----~~~~l~~i~~~~~~~~~~~~~~~~~~~  232 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS-----DLDQLTRIFETLGTPTEEQWPDMCSLP  232 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCC-----HHHHHHHHHHhcCCCChhhccchhccc
Confidence            125799999999988654 57999999999999999999999986432     1112222222111111   11100000


Q ss_pred             ----ccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          234 ----IVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       234 ----~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          ........+. ........+.+|+.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         233 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence                0000000000 00122345889999999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.5e-42  Score=291.54  Aligned_cols=209  Identities=13%  Similarity=0.163  Sum_probs=157.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CCC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FPF   92 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~~   92 (284)
                      ++|...+.||+|+||+||+|.+  +|+.||||++...                                        +|.
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~   84 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   84 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecC
Confidence            4678888999999999999998  7899999998543                                        111


Q ss_pred             c---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEec-----CCcceeeccccccccCCCCc
Q 039895           93 S---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQE-----ENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        93 ~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~Dfg~a~~~~~~~~  152 (284)
                      .               .....++.|++.||.|||   +.+|+||||||+|||++.     ++.+||+|||+|+.......
T Consensus        85 ~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (293)
T d1csna_          85 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  161 (293)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence            1               567789999999999999   999999999999999974     56799999999988754322


Q ss_pred             cc----cCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccc
Q 039895          153 HI----NDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKE  228 (284)
Q Consensus       153 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (284)
                      ..    .......||+.|||||++.+..++.++|||||||++|||++|..||.....  .........+..........+
T Consensus       162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~--~~~~~~~~~i~~~~~~~~~~~  239 (293)
T d1csna_         162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--ATNKQKYERIGEKKQSTPLRE  239 (293)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS--CCHHHHHHHHHHHHHHSCHHH
T ss_pred             ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccc--hhHHHHHHHHHhccCCCChHH
Confidence            11    122336799999999999999999999999999999999999999975431  111111111111111111111


Q ss_pred             cccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          229 IVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      +               ....+.++.+++..|+..+|++||+.+.+.+.|+++.+.
T Consensus       240 l---------------~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~  279 (293)
T d1csna_         240 L---------------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  279 (293)
T ss_dssp             H---------------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             h---------------cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence            1               011234488999999999999999999999999987653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-43  Score=294.08  Aligned_cols=182  Identities=21%  Similarity=0.321  Sum_probs=143.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            4688889999999999999998  7899999987532                                           


Q ss_pred             ------CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC-Ccceeeccccccc
Q 039895           90 ------FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE-NVAQLFDFTLSLS  146 (284)
Q Consensus        90 ------~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~-~~~kl~Dfg~a~~  146 (284)
                            +|.                +.....++.||+.||.|||   +.+|+||||||+|||++.+ +.+||+|||+|+.
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECcccccee
Confidence                  111                0556789999999999999   9999999999999999954 7999999999977


Q ss_pred             cCCCCccccCCCCcccCccccccccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTTGDF-SEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES  225 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
                      ......     ....||+.|+|||++.+..+ +.++||||+||++|||++|..||....          .    .. ...
T Consensus       161 ~~~~~~-----~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----------~----i~-~~~  220 (273)
T d1xwsa_         161 LKDTVY-----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------E----II-RGQ  220 (273)
T ss_dssp             CCSSCB-----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H----HH-HCC
T ss_pred             cccccc-----cccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----------H----Hh-hcc
Confidence            644322     22679999999999887765 567899999999999999999985311          1    00 110


Q ss_pred             ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      .  .+.+              ..+..+.+|+.+||+.||++|||+.|+++
T Consensus       221 ~--~~~~--------------~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         221 V--FFRQ--------------RVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             C--CCSS--------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             c--CCCC--------------CCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            0  0011              11234789999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-43  Score=298.70  Aligned_cols=199  Identities=21%  Similarity=0.268  Sum_probs=151.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCc--ceEEEeecCC-----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDR--PISVMKFEDT-----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~--~vavK~~~~~-----------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|.+  +|.  .||||++...                                         
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            6777888999999999999999  444  5788887533                                         


Q ss_pred             --CCCc-------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcc
Q 039895           90 --FPFS-------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVA  136 (284)
Q Consensus        90 --~~~~-------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~  136 (284)
                        +|..                               ..++.++.||+.||.|||   +.+|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCce
Confidence              1111                               346789999999999999   9999999999999999999999


Q ss_pred             eeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHH
Q 039895          137 QLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDL  216 (284)
Q Consensus       137 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~  216 (284)
                      ||+|||+++........    ....||+.|+|||.+....++.++|||||||++|||++|..|++...       .....
T Consensus       167 kl~DfG~a~~~~~~~~~----~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-------~~~~~  235 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-------TCAEL  235 (309)
T ss_dssp             EECCTTCEESSCEECCC--------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-------CHHHH
T ss_pred             EEccccccccccccccc----cceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-------CHHHH
Confidence            99999999765433222    22568999999999999999999999999999999999876543211       12222


Q ss_pred             HHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          217 VKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .... ..+...               +.+..+++.+.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       236 ~~~i-~~~~~~---------------~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         236 YEKL-PQGYRL---------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HHHG-GGTCCC---------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHH-HhcCCC---------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            2221 111100               11122334588999999999999999999999999998864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-43  Score=295.15  Aligned_cols=203  Identities=19%  Similarity=0.285  Sum_probs=155.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-------CCcceEEEeecCC--------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-------QDRPISVMKFEDT--------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-------~~~~vavK~~~~~--------------------------------------   89 (284)
                      ++|...+.||+|+||.||+|++       +++.||||++...                                      
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            5677788999999999999986       3458999999754                                      


Q ss_pred             -----CCCc---------------------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEe
Q 039895           90 -----FPFS---------------------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQ  131 (284)
Q Consensus        90 -----~~~~---------------------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~  131 (284)
                           +|..                                 ..++.++.||+.||+|||   +++|+||||||+|||++
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~~  179 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLT  179 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccccccccccc
Confidence                 2211                                 457789999999999999   99999999999999999


Q ss_pred             cCCcceeeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc
Q 039895          132 EENVAQLFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDY  211 (284)
Q Consensus       132 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~  211 (284)
                      .++.+|++|||+++.......... .....||+.|+|||++....++.++|||||||++|||+|+..|+....   ....
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~---~~~~  255 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVV-KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM---PVDS  255 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEE-CSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC---CSSH
T ss_pred             ccCcccccccchheeccCCCcceE-eeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC---CHHH
Confidence            999999999999988765443322 233689999999999999999999999999999999999655554322   1111


Q ss_pred             cHHHHHHHHhhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHhc
Q 039895          212 RLQDLVKKYIENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQLRQIYQS  283 (284)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~L~~l~~~  283 (284)
                      .+...+..    +....               .+...+..+.+|+.+||+.||.+|||+.||++.|+++..+
T Consensus       256 ~~~~~i~~----~~~~~---------------~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         256 KFYKMIKE----GFRML---------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHHHH----TCCCC---------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc----CCCCC---------------CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            12222211    11000               0112234488999999999999999999999999876543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-43  Score=297.00  Aligned_cols=190  Identities=21%  Similarity=0.287  Sum_probs=149.8

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|...+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5788889999999999999999  8999999998532                                           


Q ss_pred             --CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 --FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 --~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                        +|..               .....++.||+.||.|||   +++|+||||||+|||+++++.+||+|||+++.......
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence              2211               567789999999999999   99999999999999999999999999999987654332


Q ss_pred             cccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcccccccc
Q 039895          153 HINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEIVDP  232 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
                      ..   ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..        ......... .+..      
T Consensus       159 ~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~-~~~~------  220 (320)
T d1xjda_         159 KT---NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--------EEELFHSIR-MDNP------  220 (320)
T ss_dssp             CB---CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCC------
T ss_pred             cc---cccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC--------HHHHHHHHH-cCCC------
Confidence            21   22679999999999999999999999999999999999999997532        112121111 1110      


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHH-HHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIV-QVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-ev~~  275 (284)
                      .+          +...+..+.+|+.+||+.||++|||+. |+++
T Consensus       221 ~~----------p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         221 FY----------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CC----------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CC----------CccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            00          011233478999999999999999995 6653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.8e-43  Score=290.44  Aligned_cols=194  Identities=19%  Similarity=0.293  Sum_probs=150.3

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5788889999999999999998  8899999998542                                           


Q ss_pred             --------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 --------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 --------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                              +|..               .....++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchheeE
Confidence                    1111               667889999999999999   99999999999999999999999999999988


Q ss_pred             cCCCCccccCCCCcccCccccccccccC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHH
Q 039895          147 IPEGETHINDSNRVIGTFGFMAPEYRTT------GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKY  220 (284)
Q Consensus       147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~  220 (284)
                      +......    ....||+.|+|||++.+      ..++.++||||+||++|||++|..||....        ........
T Consensus       160 ~~~~~~~----~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~--------~~~~~~~i  227 (277)
T d1phka_         160 LDPGEKL----REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLMLRMI  227 (277)
T ss_dssp             CCTTCCB----CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHH
T ss_pred             ccCCCce----eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC--------HHHHHHHH
Confidence            7654322    22679999999998752      357889999999999999999999997532        11111111


Q ss_pred             hhcCcccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          221 IENESFKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      . .+... .           ..+.....++++.+|+.+||+.||++|||+.||++.
T Consensus       228 ~-~~~~~-~-----------~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         228 M-SGNYQ-F-----------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             H-HTCCC-C-----------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             H-hCCCC-C-----------CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            1 11110 0           001122334458899999999999999999999753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-42  Score=289.94  Aligned_cols=212  Identities=17%  Similarity=0.193  Sum_probs=150.6

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5788889999999999999998  7999999998543                                           


Q ss_pred             CCC----------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcc
Q 039895           90 FPF----------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        90 ~~~----------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      +|.                +.....++.||+.||+|||   +.+||||||||+|||++.++.+||+|||+|+........
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCCccc
Confidence            111                1667789999999999999   999999999999999999999999999999877544332


Q ss_pred             ccCCCCcccCccccccccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC--cccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE--SFKEIV  230 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  230 (284)
                      .   ....||+.|+|||++.... ++.++||||+||++|+|++|+.||....    ....+...........  .+....
T Consensus       159 ~---~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~  231 (298)
T d1gz8a_         159 Y---THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS----EIDQLFRIFRTLGTPDEVVWPGVT  231 (298)
T ss_dssp             T---TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             c---eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCC----HHHHHHHHHHhcCCCchhhccccc
Confidence            2   2257999999999877665 5789999999999999999999996432    1111111111111100  000000


Q ss_pred             c-ccccCCC----CCCC-hhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          231 D-PAIVGEE----GLMW-PEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       231 ~-~~~~~~~----~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      . +......    .... .........+.+|+.+||+.||++|||+.|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            0 0000000    0000 0011223457899999999999999999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.1e-42  Score=288.06  Aligned_cols=210  Identities=20%  Similarity=0.267  Sum_probs=147.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-CCcceEEEeecCCCC------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-QDRPISVMKFEDTFP------------------------------------------   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~------------------------------------------   91 (284)
                      +.|...+.||+|+||+||+|.+ +|+.||||++.....                                          
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4677778999999999999999 889999999865411                                          


Q ss_pred             ----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCcccc
Q 039895           92 ----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHIN  155 (284)
Q Consensus        92 ----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  155 (284)
                                      .+.....++.||+.||+|||   +.+|+||||||+|||++.++.+|++|||.+.......... 
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~-  157 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-  157 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCcccc-
Confidence                            11667789999999999999   8999999999999999999999999999998775443221 


Q ss_pred             CCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc---ccccc-
Q 039895          156 DSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES---FKEIV-  230 (284)
Q Consensus       156 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-  230 (284)
                        ....|++.|+|||.+.+. .++.++||||+||++|||++|+.||.+..     .......+........   +.... 
T Consensus       158 --~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~  230 (286)
T d1ob3a_         158 --THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-----EADQLMRIFRILGTPNSKNWPNVTE  230 (286)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             --ceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCC-----HHHHHHHHHHhhCCCChhhccchhh
Confidence              125689999999998754 57899999999999999999999996432     1111111111111111   11000 


Q ss_pred             ----cccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          231 ----DPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       231 ----~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                          ...........++ ........+.+|+.+||+.||++|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                0000000000000 01122345789999999999999999999975

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-42  Score=292.24  Aligned_cols=214  Identities=15%  Similarity=0.191  Sum_probs=149.1

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|+..+.||+|+||+||+|.+  +|+.||||++...                                           
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            5688888999999999999998  7899999997533                                           


Q ss_pred             --------CCCc---------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccc
Q 039895           90 --------FPFS---------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus        90 --------~~~~---------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                              +|..               .....++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~  166 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA  166 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeecceeee
Confidence                    1110               556789999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCccc-cCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC
Q 039895          147 IPEGETHI-NDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE  224 (284)
Q Consensus       147 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
                      +....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..     .......+.......
T Consensus       167 ~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~  241 (318)
T d3blha1         167 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-----EQHQLALISQLCGSI  241 (318)
T ss_dssp             CCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCC
T ss_pred             cccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC-----HHHHHHHHHHhcCCC
Confidence            65433221 122235799999999998765 68999999999999999999999986432     122222222221110


Q ss_pred             ---cccccccc----cccCCCCCCChhh-----HHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          225 ---SFKEIVDP----AIVGEEGLMWPEK-----EQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       225 ---~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                         ........    .+........+..     ....+.+.+|+.+||+.||++|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         242 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             CTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence               00000000    0000000011111     1123356789999999999999999999853

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-42  Score=292.42  Aligned_cols=193  Identities=16%  Similarity=0.242  Sum_probs=150.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC----------------------------------------CC
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT----------------------------------------FP   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------------------------------~~   91 (284)
                      .+.|...+.||+|+||+||+|.+  +|+.||||++...                                        +|
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            35677888999999999999998  7889999999755                                        22


Q ss_pred             Cc----------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecC--CcceeeccccccccCCCCcc
Q 039895           92 FS----------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEE--NVAQLFDFTLSLSIPEGETH  153 (284)
Q Consensus        92 ~~----------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~--~~~kl~Dfg~a~~~~~~~~~  153 (284)
                      ..                .....++.||+.||.|||   +.+|+||||||+|||++.+  ..+||+|||+++........
T Consensus        84 ~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~  160 (321)
T d1tkia_          84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence            21                567789999999999999   9999999999999999854  47899999999877554332


Q ss_pred             ccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcC-cccccccc
Q 039895          154 INDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENE-SFKEIVDP  232 (284)
Q Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  232 (284)
                      .    ...||+.|+|||.+.+..++.++||||+||++|+|++|..||....        ............ .+...   
T Consensus       161 ~----~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~--------~~~~~~~i~~~~~~~~~~---  225 (321)
T d1tkia_         161 R----LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIENIMNAEYTFDEE---  225 (321)
T ss_dssp             E----EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCCCHH---
T ss_pred             c----ccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCChh---
Confidence            2    1578999999999999999999999999999999999999997533        122222221111 11110   


Q ss_pred             cccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          233 AIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                                 .....+..+.+|+.+||..||++|||+.|+++
T Consensus       226 -----------~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         226 -----------AFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -----------HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----------hccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       01122345789999999999999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-41  Score=289.21  Aligned_cols=208  Identities=22%  Similarity=0.288  Sum_probs=147.0

Q ss_pred             CCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------C
Q 039895           56 DFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------F   90 (284)
Q Consensus        56 ~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------~   90 (284)
                      +|...++||+|+||+||+|++  +|+.||||++...                                           +
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey  100 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  100 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence            466678899999999999999  7899999998654                                           1


Q ss_pred             CCc------------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCCCC
Q 039895           91 PFS------------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        91 ~~~------------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~~  151 (284)
                      |..                  .....++.||+.||+|||   +.+|+||||||+|||++.++ .+||+|||++.......
T Consensus       101 ~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~  177 (350)
T d1q5ka_         101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE  177 (350)
T ss_dssp             CSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS
T ss_pred             cCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhccCCc
Confidence            211                  355679999999999999   99999999999999999775 89999999998775443


Q ss_pred             ccccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc-----
Q 039895          152 THINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES-----  225 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----  225 (284)
                      ..    ....||+.|+|||.+.+ ..++.++||||+||++|||++|..||....    ....+..... ......     
T Consensus       178 ~~----~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~----~~~~l~~i~~-~~g~~~~~~~~  248 (350)
T d1q5ka_         178 PN----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS----GVDQLVEIIK-VLGTPTREQIR  248 (350)
T ss_dssp             CC----CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSS----HHHHHHHHHH-HHCCCCHHHHH
T ss_pred             cc----ccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCC----HHHHHHHHHH-HhCCChHHhhh
Confidence            22    22579999999998765 468999999999999999999999996432    1111111111 000000     


Q ss_pred             --ccccccccccCCCCCCCh--hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 --FKEIVDPAIVGEEGLMWP--EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 --~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                        .....+..+.......+.  ......+.+.+|+.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         249 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              000000000000000000  01122344789999999999999999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-41  Score=291.29  Aligned_cols=214  Identities=16%  Similarity=0.213  Sum_probs=148.2

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      ..|...+.||+|+||+||+|..  +|+.||||++...                                           
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            4577778999999999999998  7999999998643                                           


Q ss_pred             ----CC-------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCc
Q 039895           90 ----FP-------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGET  152 (284)
Q Consensus        90 ----~~-------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~  152 (284)
                          +|             .+.....++.||+.||+|||   +++|+||||||+|||++.++.+||+|||++........
T Consensus        88 l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             EEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred             EEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence                00             00566789999999999999   99999999999999999999999999999987755444


Q ss_pred             cccCCCCcccCccccccccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCccccc--
Q 039895          153 HINDSNRVIGTFGFMAPEYRTT-GDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESFKEI--  229 (284)
Q Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  229 (284)
                      .........||+.|+|||++.. ..++.++||||+||++|||++|..||....     ....................  
T Consensus       165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~  239 (345)
T d1pmea_         165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH-----YLDQLNHILGILGSPSQEDLNC  239 (345)
T ss_dssp             BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCHHHHHT
T ss_pred             cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCC-----HHHHHHHHhhhccCCChhhhhh
Confidence            3333344679999999999854 467899999999999999999999986532     11111111111100000000  


Q ss_pred             -c-------cccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          230 -V-------DPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       230 -~-------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                       .       ...........+. ........+.+|+.+||+.||++|||+.|+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         240 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             0       0000000000000 001122347899999999999999999999863

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-40  Score=286.84  Aligned_cols=209  Identities=16%  Similarity=0.193  Sum_probs=143.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC------------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT------------------------------------------   89 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------------------------------   89 (284)
                      .+.|...+.||+|+||+||+|.+  +|+.||||++...                                          
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            35677778999999999999998  7999999998754                                          


Q ss_pred             -------CCCc-------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           90 -------FPFS-------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        90 -------~~~~-------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                             +|..             .....++.||+.||.|||   +.+|+||||||+|||++.++.+|++|||+++....
T Consensus        97 ~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_          97 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eEEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceeccCC
Confidence                   1111             567789999999999999   99999999999999999999999999999987754


Q ss_pred             CCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--c
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--F  226 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~  226 (284)
                      ...      ...||+.|+|||++.+. .++.++||||+||++|+|++|..||....     ................  +
T Consensus       174 ~~~------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~  242 (346)
T d1cm8a_         174 EMT------GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD-----HLDQLKEIMKVTGTPPAEF  242 (346)
T ss_dssp             SCC------SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCHHH
T ss_pred             ccc------cccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCC-----hHHHHHHHHhccCCCcHHH
Confidence            332      26799999999998764 57899999999999999999999986532     1111111111000000  0


Q ss_pred             ccc--------ccccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          227 KEI--------VDPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       227 ~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                      ...        ....+.......++ ......+.+.+|+.+||..||++|||+.|++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000        00000000000000 011223347899999999999999999999874

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=278.75  Aligned_cols=211  Identities=11%  Similarity=0.142  Sum_probs=150.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCC-----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFP-----------------------------------------   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----------------------------------------   91 (284)
                      +.|+..+.||+|+||+||+|++  +|+.||||+++....                                         
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4577788999999999999998  789999999864410                                         


Q ss_pred             -----------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           92 -----------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        92 -----------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                                       .+.....++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||.++.........
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence                             00567789999999999999   9999999999999999999999999999998876543322


Q ss_pred             cCCCCcccCccccccccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc---cccc-
Q 039895          155 NDSNRVIGTFGFMAPEYRTTGD-FSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES---FKEI-  229 (284)
Q Consensus       155 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-  229 (284)
                      .   ...+++.|+|||++.... ++.++||||+||++|||++|+.||....    ........+........   +... 
T Consensus       159 ~---~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  231 (292)
T d1unla_         159 S---AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             C---SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             e---eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCC----CHHHHHHHHHhhcCCCChhhhhhhh
Confidence            2   245788899999987665 6899999999999999999999986432    11111121222111110   0000 


Q ss_pred             -----ccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          230 -----VDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       230 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                           ......................+.+|+.+||+.||.+|||++||++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 0000000000111112223345789999999999999999999975

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-40  Score=281.07  Aligned_cols=195  Identities=22%  Similarity=0.261  Sum_probs=147.5

Q ss_pred             cCCCCCCeeeecCCceEEEEEe-----CCcceEEEeecCC----------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL-----QDRPISVMKFEDT----------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~----------------------------------------   89 (284)
                      ++|+..+.||+|+||+||+|..     +|+.||||++...                                        
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            6688899999999999999986     4788999998533                                        


Q ss_pred             ------CCC---------------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccC
Q 039895           90 ------FPF---------------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIP  148 (284)
Q Consensus        90 ------~~~---------------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~  148 (284)
                            +|.               +.....++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhhc
Confidence                  111               1556678999999999999   9999999999999999999999999999998775


Q ss_pred             CCCccccCCCCcccCccccccccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCcc
Q 039895          149 EGETHINDSNRVIGTFGFMAPEYRTTG--DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENESF  226 (284)
Q Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (284)
                      ........  ...|++.|+|||.+.+.  .++.++|||||||++|||++|..||.....    ............... .
T Consensus       181 ~~~~~~~~--~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~----~~~~~~i~~~~~~~~-~  253 (322)
T d1vzoa_         181 ADETERAY--DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSE-P  253 (322)
T ss_dssp             GGGGGGGC--GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS----CCCHHHHHHHHHHCC-C
T ss_pred             cccccccc--ccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcccCC-C
Confidence            44333222  26799999999998754  467899999999999999999999975431    112222222211110 0


Q ss_pred             cccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCC-----HHHHHH
Q 039895          227 KEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPT-----IVQVAK  275 (284)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~ev~~  275 (284)
                                      +.+...+..+.+|+.+||+.||++|||     ++|+++
T Consensus       254 ----------------~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         254 ----------------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             ----------------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ----------------CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence                            001123345889999999999999994     788875

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.1e-40  Score=282.88  Aligned_cols=210  Identities=18%  Similarity=0.225  Sum_probs=150.4

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-----------------------------------------CC
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-----------------------------------------FP   91 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----------------------------------------~~   91 (284)
                      ++|...+.||+|+||+||+|+.  +|+.||||++...                                         +|
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~  114 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  114 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeec
Confidence            5688889999999999999998  7999999998765                                         11


Q ss_pred             Cc------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCC-cceeeccccccccCCCCccccCCC
Q 039895           92 FS------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEEN-VAQLFDFTLSLSIPEGETHINDSN  158 (284)
Q Consensus        92 ~~------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~  158 (284)
                      ..            .....++.||+.||.|||   +.+|+||||||+|||++.++ .+||+|||+++........    .
T Consensus       115 ~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~----~  187 (328)
T d3bqca1         115 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY----N  187 (328)
T ss_dssp             CSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCC----C
T ss_pred             CCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCCcc----c
Confidence            11            567789999999999999   99999999999999999655 6899999999877654322    2


Q ss_pred             CcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhh---------cCc---
Q 039895          159 RVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIE---------NES---  225 (284)
Q Consensus       159 ~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~---  225 (284)
                      ...||+.|+|||.+.+. .++.++||||+||+++|+++|..||.....    .......+.....         ...   
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~----~~~~~~~i~~~~g~~~~~~~~~~~~~~~  263 (328)
T d3bqca1         188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD----NYDQLVRIAKVLGTEDLYDYIDKYNIEL  263 (328)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS----HHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCch----hHHHHHHHHHHHCCchhhhhhhhccccc
Confidence            25789999999998765 479999999999999999999999875431    1111111111000         000   


Q ss_pred             ---ccccccccccC--CCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          226 ---FKEIVDPAIVG--EEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       226 ---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                         +..........  ......+......+++.+|+.+||+.||++|||++|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               00000000000  000011112233455789999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-39  Score=279.62  Aligned_cols=208  Identities=16%  Similarity=0.189  Sum_probs=144.9

Q ss_pred             cCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCC-------------------------------------------
Q 039895           55 DDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT-------------------------------------------   89 (284)
Q Consensus        55 ~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-------------------------------------------   89 (284)
                      +.|...++||+|+||+||+|.+  +|+.||||++...                                           
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5688888999999999999998  7999999998644                                           


Q ss_pred             ------CCCc------------hhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCC
Q 039895           90 ------FPFS------------VSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGE  151 (284)
Q Consensus        90 ------~~~~------------~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~  151 (284)
                            +|..            .....++.||+.||.|||   +.||+||||||+|||++.++.+|++|||+++......
T Consensus        97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~  173 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  173 (355)
T ss_dssp             EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             eEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhcccccc
Confidence                  1111            567789999999999999   9999999999999999999999999999987765433


Q ss_pred             ccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHh----------
Q 039895          152 THINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYI----------  221 (284)
Q Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------  221 (284)
                      ..    ....||+.|+|||++.+..++.++||||+||++++|++|+.||.+..    .............          
T Consensus       174 ~~----~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~----~~~~~~~i~~~~~~~~~~~~~~~  245 (355)
T d2b1pa1         174 MM----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD----YIDQWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_dssp             -----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCHHHHTTS
T ss_pred             cc----ccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCC----HHHHHHHHHHhccCCCHHHHHHh
Confidence            22    22578999999999999999999999999999999999999986432    1111111111000          


Q ss_pred             --------hcC-c-----ccccccccccCCCCCCChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q 039895          222 --------ENE-S-----FKEIVDPAIVGEEGLMWPEKEQQLLICTELAFKCLSESEGDRPTIVQVAKQ  276 (284)
Q Consensus       222 --------~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~~  276 (284)
                              ... .     ........   ...............+.+|+.+||+.||++|||++|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         246 QPTVRNYVENRPKYAGLTFPKLFPDS---LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHSCGG---GSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhHHHHhhcCccccccccccccccc---cccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                    000 0     00000000   0111122344566778999999999999999999999853

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.3e-39  Score=276.80  Aligned_cols=212  Identities=13%  Similarity=0.140  Sum_probs=147.1

Q ss_pred             CCCCCeeeecCCceEEEEEe--CCcceEEEeecCC---------------------------------------------
Q 039895           57 FDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDT---------------------------------------------   89 (284)
Q Consensus        57 f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---------------------------------------------   89 (284)
                      |...+.||+|+||+||+|+.  +|+.||||++...                                             
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~   94 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP   94 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccc
Confidence            77788999999999999998  7999999998754                                             


Q ss_pred             --------C------------------CCchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCc------ce
Q 039895           90 --------F------------------PFSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENV------AQ  137 (284)
Q Consensus        90 --------~------------------~~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~------~k  137 (284)
                              +                  ........++.||+.||+|||+  ..+|+||||||+|||++.++.      ++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~k  172 (362)
T d1q8ya_          95 NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIK  172 (362)
T ss_dssp             TEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             cceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccceee
Confidence                    0                  0004567799999999999993  389999999999999987653      89


Q ss_pred             eeccccccccCCCCccccCCCCcccCccccccccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCcc--ccHHH
Q 039895          138 LFDFTLSLSIPEGETHINDSNRVIGTFGFMAPEYRTTGDFSEKSDVYSFGALLLELLTGKKISYSSHFDDGED--YRLQD  215 (284)
Q Consensus       138 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~--~~~~~  215 (284)
                      ++|||.+........      ...||+.|+|||++....++.++||||+||++++|++|+.||..........  ..+..
T Consensus       173 l~dfg~s~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         173 IADLGNACWYDEHYT------NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             ECCCTTCEETTBCCC------SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             Eeecccccccccccc------cccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence            999999876543322      2679999999999999999999999999999999999999987543111110  01111


Q ss_pred             HHHHHhh-------cCc-ccccccc-----cccCCCCC--------CChhhHHHHHHHHHHHHHhhcCCCCCCCCHHHHH
Q 039895          216 LVKKYIE-------NES-FKEIVDP-----AIVGEEGL--------MWPEKEQQLLICTELAFKCLSESEGDRPTIVQVA  274 (284)
Q Consensus       216 ~~~~~~~-------~~~-~~~~~~~-----~~~~~~~~--------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~  274 (284)
                      .+.....       ... .....+.     .+......        ...........+.+|+.+||..||.+|||++|++
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            1111000       000 0000000     00000000        1112345667789999999999999999999998


Q ss_pred             HH
Q 039895          275 KQ  276 (284)
Q Consensus       275 ~~  276 (284)
                      ++
T Consensus       327 ~H  328 (362)
T d1q8ya_         327 NH  328 (362)
T ss_dssp             TC
T ss_pred             cC
Confidence            63

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-39  Score=276.47  Aligned_cols=208  Identities=17%  Similarity=0.259  Sum_probs=144.8

Q ss_pred             hcCCCCCCeeeecCCceEEEEEe--CCcceEEEeecCCCC----------------------------------------
Q 039895           54 TDDFDGGKVIMKCLFYKLYKGFL--QDRPISVMKFEDTFP----------------------------------------   91 (284)
Q Consensus        54 ~~~f~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~----------------------------------------   91 (284)
                      .+.|...+.||+|+||+||+|.+  +|+.||||++.....                                        
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            35688888999999999999998  799999999864400                                        


Q ss_pred             ----------------------CchhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCC
Q 039895           92 ----------------------FSVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPE  149 (284)
Q Consensus        92 ----------------------~~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~  149 (284)
                                            .+.....++.||+.||.|||   +++|+||||||+|||++.++.+|++|||++.....
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhcccCc
Confidence                                  00567789999999999999   99999999999999999999999999999876543


Q ss_pred             CCccccCCCCcccCccccccccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccccHHHHHHHHhhcCc--c
Q 039895          150 GETHINDSNRVIGTFGFMAPEYRTTG-DFSEKSDVYSFGALLLELLTGKKISYSSHFDDGEDYRLQDLVKKYIENES--F  226 (284)
Q Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~  226 (284)
                      ..      ....||+.|+|||++.+. .++.++||||+||++|+|++|..||.+..     .......+........  .
T Consensus       174 ~~------~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~-----~~~~~~~i~~~~~~~~~~~  242 (348)
T d2gfsa1         174 EM------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-----HIDQLKLILRLVGTPGAEL  242 (348)
T ss_dssp             GG------SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCHHH
T ss_pred             cc------ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCChHH
Confidence            22      126789999999987665 46899999999999999999999996532     1111111111111000  0


Q ss_pred             cccc--------cccccCCCCCCCh-hhHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q 039895          227 KEIV--------DPAIVGEEGLMWP-EKEQQLLICTELAFKCLSESEGDRPTIVQVAK  275 (284)
Q Consensus       227 ~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev~~  275 (284)
                      ....        ...+.......+. ........+.+|+.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            0000        0000000000000 00112345789999999999999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.85  E-value=4.2e-23  Score=161.56  Aligned_cols=116  Identities=16%  Similarity=0.135  Sum_probs=86.5

Q ss_pred             CCCeeeecCCceEEEEEe-CCcceEEEeecCC------------------------------------------------
Q 039895           59 GGKVIMKCLFYKLYKGFL-QDRPISVMKFEDT------------------------------------------------   89 (284)
Q Consensus        59 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------------------------------------------------   89 (284)
                      .++.||+|+||+||+|.. +|+.||||++...                                                
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            357899999999999998 8999999987532                                                


Q ss_pred             -------CCC--------chhHHHHHHHHHHHHHHhccCCCCCeeecccccCcEEEecCCcceeeccccccccCCCCccc
Q 039895           90 -------FPF--------SVSKLKIAIEIASAVAYLHVGFSRPVVSRDIKPTTIVLQEENVAQLFDFTLSLSIPEGETHI  154 (284)
Q Consensus        90 -------~~~--------~~~~~~i~~~i~~gL~~LH~~~~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  154 (284)
                             ++.        ......++.|++.||.|||   ..+|+||||||+|||+++++ ++|+|||.|......... 
T Consensus        84 ~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~~-  158 (191)
T d1zara2          84 GNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGWR-  158 (191)
T ss_dssp             TTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETTE-EEECCCTTCEETTSTTHH-
T ss_pred             CCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCCC-EEEEECCCcccCCCCCcH-
Confidence                   000        0455689999999999999   99999999999999999655 889999998765432211 


Q ss_pred             cCCCCcccCcccccc------ccccCCCCCcchhHHHHHHHH
Q 039895          155 NDSNRVIGTFGFMAP------EYRTTGDFSEKSDVYSFGALL  190 (284)
Q Consensus       155 ~~~~~~~gt~~y~aP------E~~~~~~~~~~~DvwS~G~il  190 (284)
                                .|...      +.+ ...|+.++|+||..--+
T Consensus       159 ----------~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         159 ----------EILERDVRNIITYF-SRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             ----------HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence                      11111      111 34678899999975433

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.52  E-value=0.00031  Score=56.96  Aligned_cols=46  Identities=15%  Similarity=0.260  Sum_probs=34.3

Q ss_pred             eecHHHHHHHhcCCCCCCeee-----ecCCceEEEEEeCCcceEEEeecCC
Q 039895           44 SFSADELKTATDDFDGGKVIM-----KCLFYKLYKGFLQDRPISVMKFEDT   89 (284)
Q Consensus        44 ~~~~~~l~~~~~~f~~~~~lg-----~G~~g~Vy~~~~~~~~vavK~~~~~   89 (284)
                      .++.+|+......|..+++..     .|---+.|+.+.++..+++|++...
T Consensus         2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~   52 (316)
T d2ppqa1           2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR   52 (316)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-
T ss_pred             CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCcEEEEEcCCC
Confidence            578899999999998877654     4545678999997677999998653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.11  E-value=0.00047  Score=54.09  Aligned_cols=27  Identities=19%  Similarity=0.345  Sum_probs=24.1

Q ss_pred             eeecccccCcEEEecCCcceeeccccc
Q 039895          118 VVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       118 ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ++|+|+.|.|||++.++.+-|.||+.+
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a  211 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEEeeccCcceeecCCceEEEeechhc
Confidence            799999999999998776779999876

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.28  E-value=0.019  Score=46.33  Aligned_cols=49  Identities=10%  Similarity=0.055  Sum_probs=31.1

Q ss_pred             CcceecHHHHHHHhcCC--C-CCCeeeecC-CceEEEEEe-CCcceEEEeecCC
Q 039895           41 PIRSFSADELKTATDDF--D-GGKVIMKCL-FYKLYKGFL-QDRPISVMKFEDT   89 (284)
Q Consensus        41 ~~~~~~~~~l~~~~~~f--~-~~~~lg~G~-~g~Vy~~~~-~~~~vavK~~~~~   89 (284)
                      ....++.+.+..+...+  . ...++--++ --.||+... +|..+++|+....
T Consensus         4 ~f~~L~pd~i~~al~~~g~~~~~~~~~L~s~EN~vy~v~~~dg~~~VlK~~rp~   57 (325)
T d1zyla1           4 TFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPE   57 (325)
T ss_dssp             CCCCCCHHHHHHHHHHTTCCCCSCCEEECCSSSEEEEECCTTCCCEEEEEECTT
T ss_pred             CccccCHHHHHHHHHHcCCCCCcCccccccccceeEEEEcCCCCEEEEEEeCCC
Confidence            34566777776655433  2 223322233 348999998 8889999998765

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.92  E-value=0.0096  Score=45.94  Aligned_cols=30  Identities=13%  Similarity=0.106  Sum_probs=25.6

Q ss_pred             CCCeeecccccCcEEEecCCcceeeccccc
Q 039895          115 SRPVVSRDIKPTTIVLQEENVAQLFDFTLS  144 (284)
Q Consensus       115 ~~~ivHrDlkp~NILl~~~~~~kl~Dfg~a  144 (284)
                      ...++|+|+.|.|||++.+..+-|.||+.+
T Consensus       174 ~~~liHgD~~~~Nvl~~~~~~~~iID~~~~  203 (255)
T d1nd4a_         174 DLVVTHGDACLPNIMVENGRFSGFIDCGRL  203 (255)
T ss_dssp             CEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             CceEEeCCCCCcceEEeCCceEEEEEchhc
Confidence            345899999999999998777789999865

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.09  E-value=0.016  Score=48.11  Aligned_cols=30  Identities=13%  Similarity=0.331  Sum_probs=25.2

Q ss_pred             CCeeecccccCcEEEecCCcceeeccccccc
Q 039895          116 RPVVSRDIKPTTIVLQEENVAQLFDFTLSLS  146 (284)
Q Consensus       116 ~~ivHrDlkp~NILl~~~~~~kl~Dfg~a~~  146 (284)
                      ..++|+|+.|.|||++.++ ++|.||..+..
T Consensus       223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             cceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            4689999999999998765 89999987643

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=80.81  E-value=0.33  Score=39.70  Aligned_cols=17  Identities=18%  Similarity=0.389  Sum_probs=13.4

Q ss_pred             eeecccccCcEEEecCC
Q 039895          118 VVSRDIKPTTIVLQEEN  134 (284)
Q Consensus       118 ivHrDlkp~NILl~~~~  134 (284)
                      ++|.|+.+.||++....
T Consensus       220 ~CHnDL~~~NiL~~~~~  236 (395)
T d1nw1a_         220 FCHNDLQEGNILLPKAS  236 (395)
T ss_dssp             EECSCCCGGGEEEEC--
T ss_pred             EEecCCCcccEeecccc
Confidence            57999999999996543