BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039903
(233 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 154/242 (63%), Gaps = 9/242 (3%)
Query: 1 MQPAMSIVLPAAMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRL 60
MQ A + VLP +++A EL + EIIAKAGP A+IS +EIA+Q+P++NP+A VMLDR+LRL
Sbjct: 24 MQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRL 83
Query: 61 LVTHRVLRCT----SAGDDQRLYGLAHVAKYFVLNRDGVS-----LCPSRPWLETKPYEI 111
L + +L C+ G QRLYGLA VAKY V N DGVS L L Y +
Sbjct: 84 LACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHL 143
Query: 112 YDAVLEGGISFNKVHGTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKGFEQIKQ 171
DAVL+GGI FNK +G +EY G D RFN VFNK M +H++I +I+++ GFE +K
Sbjct: 144 KDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKS 203
Query: 172 XXXXXXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDAIL 231
I+S Y IKG+NFDL HVI+D+ SY GV+H+GG M IPK DA+
Sbjct: 204 LVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVF 263
Query: 232 IK 233
+K
Sbjct: 264 MK 265
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 207 bits (527), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 150/248 (60%), Gaps = 20/248 (8%)
Query: 1 MQPAMSIVLPAAMQAASELGVFEIIAKA-GPTAKISAVEIAAQMPSSNPNAAVMLDRILR 59
MQ A + VLP A++AA EL V EI+AK+ P+ IS EIAAQ+P++NP A VMLDR+LR
Sbjct: 26 MQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLR 85
Query: 60 LLVTHRV----LRCTSAGDDQRLYGLAHVAKYFVLNRDGVSLCPS----------RPWLE 105
LL ++ V LR +G +RLYGLA V K+ N DGVSL P PW
Sbjct: 86 LLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFY 145
Query: 106 TKPYEIYDAVLEGGISFNKVHGTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKG 165
K DA+LEGGI FNK +G ++Y G D R N VFNK M ++++I +I++ G
Sbjct: 146 LK-----DAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNG 200
Query: 166 FEQIKQXXXXXXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIP 225
FE + +I++ Y I +NFDL HVIQD+ ++SGV+H+GG M + +P
Sbjct: 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVP 260
Query: 226 KGDAILIK 233
KGDAI IK
Sbjct: 261 KGDAIFIK 268
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 144/244 (59%), Gaps = 13/244 (5%)
Query: 1 MQPAMSIVLPAAMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSS-NPNAAVMLDRILR 59
+Q A S VLP ++ A ELG+ EI+ AG + ++ E+AA++PS+ NP A M+DRILR
Sbjct: 25 LQLASSSVLPMTLKNAIELGLLEILVAAGGKS-LTPTEVAAKLPSAANPEAPDMVDRILR 83
Query: 60 LLVTHRVLRC-TSAGDDQRL---YGLAHVAKYFVLNRDGVSLCP------SRPWLETKPY 109
LL ++ V+ C G D RL YG A V K+ N DGVS+ + +E+ Y
Sbjct: 84 LLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESW-Y 142
Query: 110 EIYDAVLEGGISFNKVHGTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKGFEQI 169
+ DAVL+GGI FNK +G +EY G D RFN VFN+ M NH+ I+T ++++ GFE +
Sbjct: 143 YLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGL 202
Query: 170 KQXXXXXXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDA 229
I ++Y IKGVNFDL HVI ++ + GV H+GG M + +P GD
Sbjct: 203 GTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDT 262
Query: 230 ILIK 233
IL+K
Sbjct: 263 ILMK 266
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 140/246 (56%), Gaps = 23/246 (9%)
Query: 6 SIVLPAAMQAASELGVFEIIAKAGPT-AKISAVEIAAQMPSSNPNAAV--MLDRILRLLV 62
++V PA + AA +L +FEIIAKA P A +S EIA+++P+S ++ + LDR+LRLL
Sbjct: 34 NLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLA 93
Query: 63 THRVLRCTSA----GDDQRLYGLAHVAKYFVLNRD-------GVSLC-PS--RPWLETKP 108
++ VL T+ G +R+YGL+ V KY V + LC P+ + W+ K
Sbjct: 94 SYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFK- 152
Query: 109 YEIYDAVLEGGIS-FNKVHGTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKGFE 167
+AV++ I F VHG YE+ G D + N +FNK+M++ + R+++ GFE
Sbjct: 153 ----EAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFE 208
Query: 168 QIKQXXXXXXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKG 227
I +IIS Y IKG+NFDL VI+++ SG++H+GG M +P+G
Sbjct: 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQG 268
Query: 228 DAILIK 233
DA+++K
Sbjct: 269 DAMILK 274
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 121/245 (49%), Gaps = 17/245 (6%)
Query: 4 AMSIVLPAAMQAASELGVFEIIAKAGPT-AKISAVEIAAQMPSSN-----PNAAVMLDRI 57
++V PA + AA +L +FEIIAKA P A S EIA+++P+S PN R+
Sbjct: 32 TTNLVYPAVLNAAIDLNLFEIIAKATPPGAFXSPSEIASKLPASTQHSDLPNRLDRXLRL 91
Query: 58 L-RLLVTHRVLRCTSAGDDQRLYGLAHVAKYFVLNRD-------GVSLCPSRPWLETKPY 109
L V R G +R+YGL+ V KY V + LC P L
Sbjct: 92 LASYSVLTSTTRTIEDGGAERVYGLSXVGKYLVPDESRGYLASFTTFLC--YPALLQVWX 149
Query: 110 EIYDAVLEGGIS-FNKVHGTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKGFEQ 168
+AV++ I F VHG YE+ G D + N +FNK+ ++ + R ++ GFE
Sbjct: 150 NFKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTGFEG 209
Query: 169 IKQXXXXXXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGD 228
I +IIS Y IKG+NFDL VI+++ SG++H+GG +P+GD
Sbjct: 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGD 269
Query: 229 AILIK 233
A ++K
Sbjct: 270 AXILK 274
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 10/227 (4%)
Query: 12 AMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRLLVTHRVLRCTS 71
+++ A E+ + II G +S + Q+PSS + R++R L + +
Sbjct: 32 SLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN---VRRLMRYLAHNGFFEIIT 88
Query: 72 AGDDQRLYGLAHVAKYFVLNRD----GVSLCPSRPWLETKPYEIYDAVLEGGIS-FNKVH 126
++ Y L ++ V D + C P L +E+ + E ++ F
Sbjct: 89 K--EEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTL 146
Query: 127 GTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKGFEQIKQXXXXXXXXXXXXXII 186
G+GF+++ + +N FN AM + + ++ + D F+ ++ II
Sbjct: 147 GSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKII 206
Query: 187 ISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDAILIK 233
+ +K + FD V+++ S + + ++GG M IP DA+L+K
Sbjct: 207 CETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLK 253
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 101/233 (43%), Gaps = 17/233 (7%)
Query: 12 AMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRLLVTH---RVLR 68
+++ + E+ + II G +S + Q+PS+ + + R++R L + ++
Sbjct: 32 SLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDN---VQRLMRYLAHNGFFEIIT 88
Query: 69 CTSAGDDQRLYGLAHVAKYFVLNRDGVSLCPS-------RPWLETKPYEIYDAVLEGGIS 121
+++ Y L ++ V G LC + P L T + + V E ++
Sbjct: 89 NQELENEEEAYALTVASELLV---KGTELCLAPMVECVLDPTLSTSFHNLKKWVYEEDLT 145
Query: 122 FNKVH-GTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKGFEQIKQXXXXXXXXX 180
V+ G +E+ + +N ++N A+ + + ++ + D + FE ++
Sbjct: 146 LFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDCNLVFEGLESIVDVGGGNG 205
Query: 181 XXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDAILIK 233
II + + V FD V+++ + + ++GG M +PK DA+L+K
Sbjct: 206 TTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKADAVLLK 258
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 12 AMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRLLVTHRVLRCTS 71
+++ A E + II G +S + Q+PSS + R+ R L + +
Sbjct: 32 SLKWAVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGN---VRRLXRYLAHNGFFEIIT 88
Query: 72 AGDDQRLYGLAHVAKYFVLNRDGVSLCPS-----RPWLETKPYEIYDAVLEGGIS-FNKV 125
++ Y L ++ V D + L P P L +E+ + E ++ F
Sbjct: 89 K--EEESYALTVASELLVRGSD-LCLAPXVECVLDPTLSGSYHELKKWIYEEDLTLFGVT 145
Query: 126 HGTGFYEYAGNDFRFNGVFNKAMLNHTSIVTNRIIDSSKGFEQIKQXXXXXXXXXXXXXI 185
G+GF+++ + +N FN A + + ++ + D F+ ++ I
Sbjct: 146 LGSGFWDFLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKI 205
Query: 186 IISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDAILIK 233
I + +K + FD V+++ S + + ++GG IP DA+L+K
Sbjct: 206 ICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLK 253
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 21/238 (8%)
Query: 12 AMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRLLVTHR------ 65
A+++A ELG+ + I G +S + + ++ +P+ +L R LRLL TH
Sbjct: 25 ALKSAMELGIADAIHNHGKPMTLSELASSLKL---HPSKVNILHRFLRLL-THNGFFAKT 80
Query: 66 -VLRCTSAGDDQRLYGLAHVAKYFVLNRDGV-------SLCPSRPWLETKPYEIYDAVLE 117
V +++ Y L +K + + +L PS + + + ++ E
Sbjct: 81 IVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKE 140
Query: 118 GGISFNKVHGTGFYEYAGNDFRFN--GVFNKAMLNHTSIVTNRIIDSSKGFEQIKQXXXX 175
+ F G F+++ D + +F AM + + + + ++ + FE ++
Sbjct: 141 QTL-FECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDV 199
Query: 176 XXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDAILIK 233
+I + H+K FD V+ + + + +GG M + IP DA+L+K
Sbjct: 200 GGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLK 257
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 21/238 (8%)
Query: 12 AMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRLLVTHR------ 65
A+++A ELG+ + I G +S + + ++ +P+ +L R LRLL TH
Sbjct: 26 ALKSAMELGIADAIHNHGKPMTLSELASSLKL---HPSKVNILHRFLRLL-THNGFFAKT 81
Query: 66 -VLRCTSAGDDQRLYGLAHVAKYFVLNRDGV-------SLCPSRPWLETKPYEIYDAVLE 117
V +++ Y L +K + + +L PS + + + ++ E
Sbjct: 82 IVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKE 141
Query: 118 GGISFNKVHGTGFYEYAGNDFRFN--GVFNKAMLNHTSIVTNRIIDSSKGFEQIKQXXXX 175
+ F G F+++ D + +F AM + + + + ++ + FE ++
Sbjct: 142 QTL-FECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDV 200
Query: 176 XXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDAILIK 233
+I + H+K FD V+ + + + +GG M + IP DA+L+K
Sbjct: 201 GGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLK 258
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 21/238 (8%)
Query: 12 AMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRLLVTHR------ 65
A+++A ELG+ + I G +S + + ++ +P+ +L R LRLL TH
Sbjct: 22 ALKSAMELGIADAIHNHGKPMTLSELASSLKL---HPSKVNILHRFLRLL-THNGFFAKT 77
Query: 66 -VLRCTSAGDDQRLYGLAHVAKYFVLNRDGV-------SLCPSRPWLETKPYEIYDAVLE 117
V +++ Y L +K + + +L PS + + + ++ E
Sbjct: 78 IVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKE 137
Query: 118 GGISFNKVHGTGFYEYAGNDFRFN--GVFNKAMLNHTSIVTNRIIDSSKGFEQIKQXXXX 175
+ F G F+++ D + +F AM + + + + ++ + FE ++
Sbjct: 138 QTL-FECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDV 196
Query: 176 XXXXXXXXXIIISNYLHIKGVNFDLSHVIQDSSSYSGVKHIGGIMLERIPKGDAILIK 233
+I + H+K FD V+ + + + +GG M + IP DA+L+K
Sbjct: 197 GGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLK 254
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 102 PWLETKPYEIYDAVLEGGISFNKVHGTGFYEYAGNDFRFNGVFNKA 147
PW ++ +V G SF+ +GT F++ D + +FN+A
Sbjct: 137 PWHWRAWEQLTHSVRTGEASFDVANGTSFWQLTHEDPKARELFNRA 182
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 7 IVLPAAMQAASELGVFEIIAKAGPTAKISAVEIAAQMPSSNPNAAVMLDRILRLLVTHRV 66
+ P A++ A+ L V + IA TA A A S LDR+LR LV +
Sbjct: 16 LATPMAVRVAATLRVADHIAAGHRTAAEIASAAGAHADS--------LDRLLRHLVAVGL 67
Query: 67 LRCTSAGDDQRLYGLAHVAKYFVLNRDGVSLCPSRPWLETKP---------YEIYDAVLE 117
D Q +YGL + RD + R WL+ E+ ++
Sbjct: 68 FTR----DGQGVYGLTEFGEQL---RDDHA-AGKRKWLDMNSAVGRGDLGFVELAHSIRT 119
Query: 118 GGISFNKVHGTGFYEYAGNDFRFNGVFNKAMLNHTSI 154
G ++ +GT F+E G+D + F+ M +H +
Sbjct: 120 GQPAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLEL 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,364,997
Number of Sequences: 62578
Number of extensions: 247885
Number of successful extensions: 523
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 16
length of query: 233
length of database: 14,973,337
effective HSP length: 96
effective length of query: 137
effective length of database: 8,965,849
effective search space: 1228321313
effective search space used: 1228321313
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)