BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039905
QFIHQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVA
TPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVN
FNVWMNSQLKSHGISSSITCNSPISSSQSMASLNRHGRVYQLEILYYL

High Scoring Gene Products

Symbol, full name Information P value
AT5G26730 protein from Arabidopsis thaliana 8.2e-28
AT5G16920 protein from Arabidopsis thaliana 1.7e-18

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039905
        (168 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2146789 - symbol:AT5G26730 "AT5G26730" species...   311  8.2e-28   1
TAIR|locus:2148191 - symbol:AT5G16920 "AT5G16920" species...   223  1.7e-18   1


>TAIR|locus:2146789 [details] [associations]
            symbol:AT5G26730 "AT5G26730" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000782 EMBL:CP002688 SMART:SM00554
            SUPFAM:SSF82153 IPI:IPI00524750 RefSeq:NP_850872.1 UniGene:At.55024
            ProteinModelPortal:F4K185 PRIDE:F4K185 EnsemblPlants:AT5G26730.1
            GeneID:832716 KEGG:ath:AT5G26730 OMA:NDISHAD PhylomeDB:F4K185
            Uniprot:F4K185
        Length = 268

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 63/127 (49%), Positives = 86/127 (67%)

Query:     7 NQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLH 66
             NQTDL +A+ + R +SY+ FV+LL+ +   +N  ++T +TFLMP+D  +S    TPE L 
Sbjct:   114 NQTDLISAMTDMRRQSYNGFVILLRFL-NDTNYFRNTDITFLMPSDNDISHADITPESLE 172

Query:    67 DFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMN 126
              FIL H+IP  L+ N++LHFPN TLVP S   RM ++T SG  G YVNNAR+V  NV  N
Sbjct:   173 TFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQN 232

Query:   127 SQLKSHG 133
             S++  HG
Sbjct:   233 SRISCHG 239


>TAIR|locus:2148191 [details] [associations]
            symbol:AT5G16920 "AT5G16920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0010584
            "pollen exine formation" evidence=RCA] InterPro:IPR000782
            EMBL:CP002688 SMART:SM00554 PROSITE:PS50213 EMBL:DQ446957
            EMBL:BT026037 IPI:IPI00529595 RefSeq:NP_568341.1 UniGene:At.31621
            ProteinModelPortal:Q1PDW1 PRIDE:Q1PDW1 EnsemblPlants:AT5G16920.1
            GeneID:831555 KEGG:ath:AT5G16920 TAIR:At5g16920 InParanoid:Q1PDW1
            OMA:PRFLANV PhylomeDB:Q1PDW1 ProtClustDB:CLSN2698814
            Genevestigator:Q1PDW1 Uniprot:Q1PDW1
        Length = 256

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 48/132 (36%), Positives = 76/132 (57%)

Query:     4 HQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLS--EVVAT 61
             H  N  +L  A+ E    +Y  FV+L+ M+  S NP     VTFLMP D+ LS   ++  
Sbjct:    29 HVPNNHELSIAIEEMEKANYFSFVMLINML-PSVNPRFLANVTFLMPKDKTLSTSNIINQ 87

Query:    62 PEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNF 121
              + + +F+L HSIP+ LL  +L   PNG++VPSS P   L ++N G+   ++NN ++++ 
Sbjct:    88 QDSVTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISR 147

Query:   122 NVWMNSQLKSHG 133
             N+     +K HG
Sbjct:   148 NICSLGSIKCHG 159


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.132   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      168       152   0.00073  105 3  11 22  0.46    31
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  133 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.89u 0.14s 16.03t   Elapsed:  00:00:01
  Total cpu time:  15.89u 0.14s 16.03t   Elapsed:  00:00:01
  Start:  Thu May  9 17:10:00 2013   End:  Thu May  9 17:10:01 2013

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