BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039905
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5CWZ3|LEU1_VESOH 2-isopropylmalate synthase OS=Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA) GN=leuA PE=3 SV=1
Length = 511
Score = 32.7 bits (73), Expect = 1.00, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 4 HQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPE 63
H+I DL+ V+ET+ +S E + L+ + + + ++TA L ND+K + T
Sbjct: 369 HEIFDEDLQALVSETQTESCDEAIKLVSLKVCTETNEKNTATVVLFINDKKKTATANTSG 428
Query: 64 HLH-DFILSHSIPTVLLNNNLLHFPNGT 90
+ F +S+ ++ +N L N T
Sbjct: 429 AVDATFSAINSLASIKINLQLYSVSNVT 456
>sp|P27909|POLG_DEN1B Genome polyprotein OS=Dengue virus type 1 (strain Brazil/97-11/1997)
PE=1 SV=2
Length = 3392
Score = 31.2 bits (69), Expect = 3.5, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 49 MPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHF----PNGTL--VPSSQPGRMLS 102
+ N+ K+++++ PEH +L+ SI + N ++ NGT+ V S + R
Sbjct: 3039 LQNEAKITDIME-PEHA---LLATSIFKLTYQNKVVRVQRPAKNGTVMDVISRRDQR--- 3091
Query: 103 MTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITCNSPISSSQSMASLNRHG 157
SG++GTY N N V + Q++S GI SP + + + L +HG
Sbjct: 3092 --GSGQVGTYGLNT-FTNMEVQLIRQMESEGIFFPSELESPNLAERVLDWLEKHG 3143
>sp|Q86UU0|BCL9L_HUMAN B-cell CLL/lymphoma 9-like protein OS=Homo sapiens GN=BCL9L PE=1 SV=1
Length = 1499
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 51 NDEKLSEVV-ATPEHLHDFILSHSIPTVLLNNNLLHFPN 88
ND +LSEV+ TP + +F LS IP+ ++ L +FP
Sbjct: 1306 NDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPK 1344
>sp|O26719|THTR_METTH Putative thiosulfate sulfurtransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_622 PE=4 SV=1
Length = 286
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 47 FLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNG 89
+LM N E ++ + P ++HD+IL H V LN L P G
Sbjct: 18 WLMENMEDVAIIDCQP-NIHDYILEHIPGAVYLNEGLFREPRG 59
>sp|Q67FY2|BCL9L_MOUSE B-cell CLL/lymphoma 9-like protein OS=Mus musculus GN=Bcl9l PE=1 SV=1
Length = 1494
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 51 NDEKLSEVV-ATPEHLHDFILSHSIPTVLLNNNLLHFPN 88
ND +LSEV+ TP + +F LS IP+ ++ L +FP
Sbjct: 1301 NDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPK 1339
>sp|Q9FGW0|FLA20_ARATH Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis
thaliana GN=FLA20 PE=3 SV=1
Length = 424
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 9 TDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLH-D 67
T + +AV Y + LK+ N +T P+D+ S+ P L
Sbjct: 67 TSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKF-GQPSLLDMK 125
Query: 68 FILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLG--TYVNN 115
+ LS PT L L + PNG +P+ + L++TNS + G T +NN
Sbjct: 126 YQLS---PTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINN 172
>sp|Q3UY96|K1751_MOUSE Uncharacterized protein KIAA1751 homolog OS=Mus musculus PE=2 SV=2
Length = 784
Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 79 LNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSI 138
L+ L+ F GT V R++++TN G LGT F M+ + ISS
Sbjct: 617 LDKELIDF--GTYVVGETTSRIITLTNVGGLGTKFKFLPDSEF-YEMDESQPAMKISSLF 673
Query: 139 TCNSPISSSQSMASLNRHGRVYQLEI 164
TC I + M SL+ QLE+
Sbjct: 674 TCEEKIIYEKIMTSLSEQ----QLEV 695
>sp|Q9FL53|FLA21_ARATH Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana
GN=FLA21 PE=2 SV=1
Length = 353
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 62 PEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPS--SQPGRMLSMTNSGKLGTYVNNARLV 119
P L + H++P +L ++LL P GT +P+ +S N VN+ R+
Sbjct: 100 PLFLKQLLHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRIT 159
Query: 120 NFNVWMNSQLKSHGI 134
+ ++++ L HG+
Sbjct: 160 HPDMFLGDSLVIHGV 174
>sp|Q05858|FMN_CHICK Formin OS=Gallus gallus GN=LD PE=2 SV=1
Length = 1213
Score = 29.6 bits (65), Expect = 9.3, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 40 LQSTAVTFLMPNDEKLSEV---VATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQ 96
+Q+ TF+ P++E+ V P+ L+ L+HSI T N + P+ V S Q
Sbjct: 587 IQTDRETFIKPSEEENRAVKNNQIVPKKLNISSLTHSISTQGENKDSYDVPSSESVLSCQ 646
Query: 97 PGRML 101
P +ML
Sbjct: 647 PKQML 651
>sp|P23973|MENF_BACSU Menaquinone-specific isochorismate synthase OS=Bacillus subtilis
(strain 168) GN=menF PE=3 SV=2
Length = 471
Score = 29.6 bits (65), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 11 LETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFIL 70
+ETA ++ + K Y + V+ ++++ P+Q V + +D++ S V A + F+
Sbjct: 212 IETATSQIKEKQYDKVVLARELLLTFDGPIQIEPVLKTLLDDQQTSYVFAIEQEGKTFV- 270
Query: 71 SHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNS 106
+ P L+ + GT++ S G + N
Sbjct: 271 -GASPERLIKRD-----GGTVMSSCLAGSIKRGVNE 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,390,708
Number of Sequences: 539616
Number of extensions: 2053364
Number of successful extensions: 6086
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6076
Number of HSP's gapped (non-prelim): 24
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)