BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039909
         (339 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P85063|ALLD3_ACTDE Allergen Act d 3 (Fragments) OS=Actinidia deliciosa PE=1 SV=3
          Length = 36

 Score = 34.7 bits (78), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 16/23 (69%)

Query: 22 TDGLLPNGNFEYGPKRSQMKGTV 44
          TDGL+ NGNFE  PK   M GTV
Sbjct: 2  TDGLMKNGNFELAPKPEDMXGTV 24


>sp|Q8S983|ARFK_ORYSJ Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11
           PE=2 SV=1
          Length = 955

 Score = 33.5 bits (75), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 14/104 (13%)

Query: 135 LPMQTMYSNNGWDSYAWAFVADAEEVEITIHNPGVEEDPACGPLIDSVALKVLYPPKRTG 194
           LP +T+   +   S A +++ D ++V +     G +E   CG + DS             
Sbjct: 559 LPHKTVSEKSDLSS-APSWICDNQQVGLESKLVGCDEQVNCGNIEDSSG----------- 606

Query: 195 VNILKNGNFEEGPYVFPNASWGVLIPPKIEDDHSPLPGWIIESL 238
              L  GNF   P+       GVL PPK+E   SP  G  + S 
Sbjct: 607 --ALTQGNFVGQPHGHQVEQKGVLSPPKVESSKSPDGGKSVNSF 648


>sp|Q01K26|ARFK_ORYSI Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11
           PE=2 SV=2
          Length = 955

 Score = 33.5 bits (75), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 14/104 (13%)

Query: 135 LPMQTMYSNNGWDSYAWAFVADAEEVEITIHNPGVEEDPACGPLIDSVALKVLYPPKRTG 194
           LP +T+   +   S A +++ D ++V +     G +E   CG + DS             
Sbjct: 559 LPHKTVSEKSDLSS-APSWICDNQQVGLESKLVGCDEQVNCGNIEDSSG----------- 606

Query: 195 VNILKNGNFEEGPYVFPNASWGVLIPPKIEDDHSPLPGWIIESL 238
              L  GNF   P+       GVL PPK+E   SP  G  + S 
Sbjct: 607 --ALTQGNFVGQPHGHQVEQKGVLSPPKVESSKSPDGGKSVNSF 648


>sp|P09792|GST28_SCHMA Glutathione S-transferase class-mu 28 kDa isozyme OS=Schistosoma
           mansoni GN=GST28 PE=1 SV=1
          Length = 211

 Score = 33.1 bits (74), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 202 NFEEGPYVFPNASWGVLIPPKIEDDHSPLPGWIIESLKAVKYIDLKHFFVPE 253
           +F++ P + P    G L   K+ DDH  +  W++ESL   +Y+  KH  + E
Sbjct: 37  SFQDWPKIKPTIPGGRLPAVKVTDDHGHVK-WMLESLAIARYMAKKHHMMGE 87


>sp|Q45716|CR1JB_BACTU Pesticidal crystal protein cry1Jb OS=Bacillus thuringiensis GN=cry1Jb
            PE=2 SV=1
          Length = 1170

 Score = 32.0 bits (71), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 11/63 (17%)

Query: 49   NAIPNWQISGYVEYIKSGHKQGDMLLIVPEGVFAVRLGNEASIKQNIKVTKGRFYSMTFS 108
            N +  W + G+V+  +S H+    +L++PE         EA + Q ++V  GR Y +  +
Sbjct: 973  NGLTCWNVKGHVDVQQSHHRS---VLVIPEW--------EAEVSQKVRVCPGRGYILRVT 1021

Query: 109  AAR 111
            A +
Sbjct: 1022 AYK 1024


>sp|P30114|GST28_SCHHA Glutathione S-transferase class-mu 28 kDa isozyme OS=Schistosoma
           haematobium PE=1 SV=1
          Length = 211

 Score = 31.6 bits (70), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 202 NFEEGPYVFPNASWGVLIPPKIEDDHSPLPGWIIESLKAVKYIDLKHFFVPE 253
           +F++ P + P    G L   KI D+H  +  W++ESL   +Y+  KH  + E
Sbjct: 37  SFQDWPKIKPTIPGGRLPAVKITDNHGHVK-WMLESLAIARYMAKKHHMMGE 87


>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa
           subsp. japonica GN=Os12g0405100 PE=2 SV=1
          Length = 454

 Score = 31.6 bits (70), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 13/86 (15%)

Query: 30  NFEYGPKRSQMKGTVVTHPNAIPNWQISGYVEYIKS----GHKQGDMLLIVPEGV----- 80
           N  Y P +S       T+P A+ NW +S    +I S    GH  G   +IVP+G+     
Sbjct: 194 NSMYSPGQSATSPGQHTYPGAVTNWTLSRSASFIASPRWPGHS-GYAQVIVPQGLVQVPG 252

Query: 81  ---FAVRLGNEASIKQNIKVTKGRFY 103
              +A ++G+ +   Q       ++Y
Sbjct: 253 WNPYAAQMGSSSPDDQQRTPVTTQYY 278


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.136    0.411 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,390,740
Number of Sequences: 539616
Number of extensions: 5612794
Number of successful extensions: 11634
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 11631
Number of HSP's gapped (non-prelim): 16
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)