BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039912
         (198 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q3UVG3|F91A1_MOUSE Protein FAM91A1 OS=Mus musculus GN=Fam91a1 PE=1 SV=1
          Length = 837

 Score = 35.0 bits (79), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 139 WKDGDVLKRLEWTYDPEVEKKALDWDDGTEGADVDDITLASDADFIQKED 188
           WK+   + RL+ T DP+  K  L WD G   + V + + A+D D   +ED
Sbjct: 311 WKNVPSVNRLKSTLDPQ--KMLLSWDGGESRSPVQEASSATDTDTNSQED 358


>sp|Q658Y4|F91A1_HUMAN Protein FAM91A1 OS=Homo sapiens GN=FAM91A1 PE=1 SV=3
          Length = 838

 Score = 35.0 bits (79), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 139 WKDGDVLKRLEWTYDPEVEKKALDWDDGTEGADVDDITLASDADFIQKED 188
           WK+   + RL+ T DP+  K  L WD G   + V + + A+D D   +ED
Sbjct: 311 WKNVPSVNRLKSTLDPQ--KMLLSWDGGESRSPVQEASSATDTDTNSQED 358


>sp|B1XU85|PURA_POLNS Adenylosuccinate synthetase OS=Polynucleobacter necessarius subsp.
           necessarius (strain STIR1) GN=purA PE=3 SV=1
          Length = 446

 Score = 31.6 bits (70), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 27  VLTPEVGNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKR 71
           VL+PE     IGEL+  GL V++     +AT ++L  H+ I H R
Sbjct: 81  VLSPEALFKEIGELEAAGLDVQSRLKISEATTLILPYHVAIDHAR 125


>sp|A4SYD1|PURA_POLSQ Adenylosuccinate synthetase OS=Polynucleobacter necessarius subsp.
           asymbioticus (strain DSM 18221 / CIP 109841 /
           QLW-P1DMWA-1) GN=purA PE=3 SV=1
          Length = 446

 Score = 31.6 bits (70), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 27  VLTPEVGNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKR 71
           VL+PE     IGEL+  GL V++     +AT ++L  H+ I H R
Sbjct: 81  VLSPEALFKEIGELEAAGLDVQSRLKISEATTLILPYHVAIDHAR 125


>sp|Q1PBD1|VM2DI_GLOHA Zinc metalloproteinase/disintegrin OS=Gloydius halys PE=2 SV=1
          Length = 477

 Score = 31.6 bits (70), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 15/118 (12%)

Query: 62  RNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVV---VGDINDGALKR---ISY 115
           +++L   H+R IE LV+V+D   F +   ++NL  ++T V   V  IN+        +S 
Sbjct: 183 QSNLTPAHQRYIE-LVIVADHGMFTK--YDSNLDTIRTWVHELVNSINEFYRSLNIDVSL 239

Query: 116 ACFSWWD----ILMGKARKEAVSVVGKWKDGDVLKRLEWTYDPEVEKKALDWDDGTEG 169
                W     I +  A    +   GKW++ D+L R+   +D  +   A+D+D+ T G
Sbjct: 240 TELEIWSNEDLINVQPAAPHTLDSFGKWRERDLLHRIH--HDNAMLLTAIDFDEPTIG 295


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.137    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,409,239
Number of Sequences: 539616
Number of extensions: 3224807
Number of successful extensions: 7472
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7470
Number of HSP's gapped (non-prelim): 8
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)