Query 039912
Match_columns 198
No_of_seqs 28 out of 30
Neff 2.8
Searched_HMMs 29240
Date Mon Mar 25 04:37:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qip_A Protein of unknown func 98.7 1.8E-08 6.1E-13 78.7 6.8 87 36-123 66-162 (165)
2 3sho_A Transcriptional regulat 94.6 0.081 2.8E-06 39.9 6.3 97 17-119 26-137 (187)
3 3l6u_A ABC-type sugar transpor 94.4 0.14 4.9E-06 39.7 7.5 70 35-106 29-99 (293)
4 3ksm_A ABC-type sugar transpor 94.4 0.15 5.1E-06 39.0 7.4 70 35-106 21-94 (276)
5 3jy6_A Transcriptional regulat 94.3 0.15 5.1E-06 39.7 7.4 68 35-106 28-95 (276)
6 3h75_A Periplasmic sugar-bindi 94.1 0.12 4.1E-06 41.9 6.7 70 35-106 25-96 (350)
7 3o74_A Fructose transport syst 94.0 0.11 3.7E-06 39.8 5.9 70 35-106 23-92 (272)
8 3tb6_A Arabinose metabolism tr 93.4 0.27 9.1E-06 38.0 7.3 70 35-106 36-109 (298)
9 3g1w_A Sugar ABC transporter; 93.4 0.26 8.8E-06 38.6 7.2 70 35-106 25-96 (305)
10 2dri_A D-ribose-binding protei 93.4 0.24 8.3E-06 38.5 7.0 70 34-105 21-91 (271)
11 3l49_A ABC sugar (ribose) tran 93.3 0.24 8.2E-06 38.4 6.8 70 35-106 26-96 (291)
12 2fn9_A Ribose ABC transporter, 93.2 0.3 1E-05 37.9 7.3 69 35-105 23-92 (290)
13 1tjy_A Sugar transport protein 93.2 0.3 1E-05 39.3 7.6 68 35-104 24-93 (316)
14 3m9w_A D-xylose-binding peripl 93.1 0.3 1E-05 38.7 7.3 70 35-106 23-93 (313)
15 2ioy_A Periplasmic sugar-bindi 93.1 0.3 1E-05 38.2 7.2 69 35-105 22-91 (283)
16 1gud_A ALBP, D-allose-binding 93.0 0.24 8.3E-06 39.0 6.6 69 35-105 22-93 (288)
17 8abp_A L-arabinose-binding pro 92.8 0.42 1.4E-05 37.3 7.6 67 35-104 23-90 (306)
18 3uug_A Multiple sugar-binding 92.7 0.32 1.1E-05 38.5 6.8 70 35-106 24-94 (330)
19 1jx6_A LUXP protein; protein-l 92.5 0.31 1.1E-05 39.1 6.7 67 35-105 65-137 (342)
20 3dbi_A Sugar-binding transcrip 92.4 0.43 1.5E-05 38.4 7.4 70 35-106 84-153 (338)
21 2vk2_A YTFQ, ABC transporter p 92.3 0.36 1.2E-05 38.2 6.7 70 34-105 22-92 (306)
22 2rgy_A Transcriptional regulat 92.1 0.44 1.5E-05 37.4 6.9 69 34-105 28-99 (290)
23 1tk9_A Phosphoheptose isomeras 92.0 0.11 3.8E-06 39.1 3.3 48 72-119 110-160 (188)
24 2fep_A Catabolite control prot 92.0 0.54 1.9E-05 37.0 7.4 69 34-105 36-104 (289)
25 2xbl_A Phosphoheptose isomeras 92.0 0.18 6E-06 38.3 4.4 48 72-119 116-166 (198)
26 2fvy_A D-galactose-binding per 91.9 0.46 1.6E-05 37.0 6.8 70 34-105 22-93 (309)
27 3d8u_A PURR transcriptional re 91.8 0.42 1.4E-05 36.7 6.4 69 34-105 23-91 (275)
28 3k4h_A Putative transcriptiona 91.7 0.49 1.7E-05 36.6 6.7 69 35-106 34-102 (292)
29 3rot_A ABC sugar transporter, 91.4 0.71 2.4E-05 36.3 7.4 71 34-106 23-96 (297)
30 3brs_A Periplasmic binding pro 91.3 0.38 1.3E-05 37.2 5.7 69 35-105 28-99 (289)
31 3brq_A HTH-type transcriptiona 91.3 1 3.6E-05 34.6 8.1 68 35-105 42-110 (296)
32 2i2w_A Phosphoheptose isomeras 91.1 0.21 7.1E-06 39.2 4.1 79 40-119 92-181 (212)
33 3huu_A Transcription regulator 91.1 0.56 1.9E-05 37.1 6.6 68 35-105 48-115 (305)
34 3e3m_A Transcriptional regulat 91.1 0.84 2.9E-05 37.2 7.8 69 35-106 91-159 (355)
35 3hcw_A Maltose operon transcri 91.1 0.64 2.2E-05 36.7 6.9 70 34-106 32-101 (295)
36 1jeo_A MJ1247, hypothetical pr 91.0 0.33 1.1E-05 36.5 4.9 91 16-119 26-131 (180)
37 2h3h_A Sugar ABC transporter, 90.9 0.84 2.9E-05 36.2 7.5 69 35-105 21-91 (313)
38 3egc_A Putative ribose operon 90.9 0.33 1.1E-05 37.8 5.1 69 35-106 29-97 (291)
39 3kjx_A Transcriptional regulat 90.8 0.71 2.4E-05 37.3 7.1 69 35-106 89-157 (344)
40 2xhz_A KDSD, YRBH, arabinose 5 90.2 0.28 9.6E-06 36.8 3.9 94 19-119 37-146 (183)
41 3h5o_A Transcriptional regulat 90.1 0.9 3.1E-05 36.7 7.1 69 35-106 83-151 (339)
42 2iks_A DNA-binding transcripti 90.1 0.46 1.6E-05 37.2 5.3 70 34-105 40-109 (293)
43 3trj_A Phosphoheptose isomeras 89.9 0.35 1.2E-05 38.2 4.5 49 71-119 113-167 (201)
44 2yva_A DNAA initiator-associat 89.7 1.3 4.5E-05 33.5 7.4 48 72-119 109-162 (196)
45 3gbv_A Putative LACI-family tr 89.6 0.4 1.4E-05 37.1 4.5 70 35-106 30-104 (304)
46 3e61_A Putative transcriptiona 89.6 0.71 2.4E-05 35.6 5.9 84 34-128 28-112 (277)
47 1x92_A APC5045, phosphoheptose 89.4 0.33 1.1E-05 37.1 3.9 48 72-119 113-166 (199)
48 2rjo_A Twin-arginine transloca 89.3 0.61 2.1E-05 37.4 5.5 71 34-106 25-98 (332)
49 1m3s_A Hypothetical protein YC 89.3 0.46 1.6E-05 35.8 4.5 91 17-119 24-129 (186)
50 3kke_A LACI family transcripti 89.3 0.93 3.2E-05 35.9 6.5 69 35-106 36-104 (303)
51 3d02_A Putative LACI-type tran 89.1 1.3 4.5E-05 34.4 7.1 69 35-105 25-95 (303)
52 2o20_A Catabolite control prot 88.9 1.2 4.2E-05 35.8 7.1 68 35-105 84-151 (332)
53 3bbl_A Regulatory protein of L 88.9 0.7 2.4E-05 36.2 5.5 66 35-105 29-96 (287)
54 1vim_A Hypothetical protein AF 88.8 0.36 1.2E-05 37.6 3.7 91 17-119 34-139 (200)
55 3o1i_D Periplasmic protein TOR 88.5 0.57 2E-05 36.4 4.7 68 35-105 26-96 (304)
56 3k9c_A Transcriptional regulat 88.5 0.89 3.1E-05 35.7 5.9 67 35-106 32-98 (289)
57 3fxa_A SIS domain protein; str 88.5 0.25 8.6E-06 38.0 2.6 98 16-120 30-143 (201)
58 3c3k_A Alanine racemase; struc 88.2 1.1 3.9E-05 34.9 6.2 67 35-105 29-95 (285)
59 2x7x_A Sensor protein; transfe 88.1 1.2 4.1E-05 35.7 6.5 69 35-105 26-96 (325)
60 3bil_A Probable LACI-family tr 87.7 1.1 3.7E-05 36.7 6.1 68 35-105 87-154 (348)
61 3qk7_A Transcriptional regulat 87.6 0.79 2.7E-05 36.1 5.0 67 35-105 31-97 (294)
62 3clk_A Transcription regulator 87.5 0.53 1.8E-05 36.8 4.0 70 34-106 28-98 (290)
63 1dbq_A Purine repressor; trans 87.0 2.7 9.1E-05 32.4 7.6 68 35-105 28-96 (289)
64 3gv0_A Transcriptional regulat 87.0 1.6 5.6E-05 34.0 6.5 68 35-106 31-99 (288)
65 3etn_A Putative phosphosugar i 86.7 0.6 2.1E-05 37.2 3.9 95 17-119 41-158 (220)
66 2l82_A Designed protein OR32; 86.4 0.88 3E-05 36.8 4.8 65 38-106 46-113 (162)
67 2hsg_A Glucose-resistance amyl 85.7 1.4 4.6E-05 35.4 5.6 68 35-105 81-148 (332)
68 3ewi_A N-acylneuraminate cytid 84.4 1.2 4.3E-05 34.3 4.6 72 38-117 46-121 (168)
69 3mmz_A Putative HAD family hyd 84.3 1.9 6.6E-05 32.4 5.6 76 36-120 47-127 (176)
70 2h0a_A TTHA0807, transcription 83.9 0.54 1.9E-05 36.1 2.4 70 34-106 19-88 (276)
71 3hs3_A Ribose operon repressor 83.7 0.6 2E-05 36.5 2.6 63 35-105 31-94 (277)
72 1pea_A Amidase operon; gene re 83.4 1.1 3.7E-05 36.6 4.1 67 36-104 160-232 (385)
73 3cvj_A Putative phosphoheptose 83.4 0.63 2.2E-05 37.1 2.6 47 73-119 109-169 (243)
74 2hqb_A Transcriptional activat 83.4 2 6.7E-05 34.8 5.6 67 35-105 28-96 (296)
75 3p6l_A Sugar phosphate isomera 82.8 1.6 5.5E-05 34.1 4.7 61 38-98 70-130 (262)
76 2zj3_A Glucosamine--fructose-6 82.6 1.1 3.9E-05 38.6 4.1 46 74-119 109-157 (375)
77 1nri_A Hypothetical protein HI 82.1 1.1 3.7E-05 37.8 3.7 49 72-120 140-191 (306)
78 2fqx_A Membrane lipoprotein TM 82.0 4.4 0.00015 33.2 7.2 66 35-105 28-95 (318)
79 3hgm_A Universal stress protei 81.5 5 0.00017 27.9 6.5 57 56-112 67-126 (147)
80 3miz_A Putative transcriptiona 81.4 0.59 2E-05 36.7 1.7 68 35-106 35-102 (301)
81 3l8h_A Putative haloacid dehal 81.4 4.4 0.00015 29.4 6.3 71 36-106 35-128 (179)
82 1j5x_A Glucosamine-6-phosphate 81.2 1.1 3.9E-05 38.0 3.5 46 74-119 102-150 (342)
83 3n07_A 3-deoxy-D-manno-octulos 80.9 3.2 0.00011 32.4 5.8 75 37-118 61-139 (195)
84 3g68_A Putative phosphosugar i 80.7 2 6.8E-05 36.9 4.9 47 73-119 83-132 (352)
85 2a3n_A Putative glucosamine-fr 80.5 1.4 5E-05 37.4 4.0 96 16-119 38-152 (355)
86 2aml_A SIS domain protein; 469 80.4 1.7 5.9E-05 37.4 4.5 46 74-119 99-148 (373)
87 3eua_A Putative fructose-amino 79.9 1.6 5.5E-05 36.9 4.0 97 15-119 8-124 (329)
88 1qpz_A PURA, protein (purine n 79.8 5.8 0.0002 31.9 7.1 68 35-105 79-147 (340)
89 2poc_A D-fructose-6- PH, isome 79.8 1.6 5.6E-05 37.4 4.1 46 74-119 99-147 (367)
90 3knz_A Putative sugar binding 79.6 2.2 7.6E-05 37.0 4.9 48 72-119 97-147 (366)
91 1tq8_A Hypothetical protein RV 78.9 8.1 0.00028 28.4 7.2 51 56-106 78-129 (163)
92 3hba_A Putative phosphosugar i 78.5 2.5 8.6E-05 36.2 4.8 47 74-120 92-141 (334)
93 3ij5_A 3-deoxy-D-manno-octulos 78.4 3.4 0.00012 32.7 5.3 75 36-118 84-163 (211)
94 3lkb_A Probable branched-chain 78.2 1 3.6E-05 36.6 2.3 68 35-104 162-230 (392)
95 3td9_A Branched chain amino ac 78.0 0.92 3.1E-05 36.4 1.9 67 36-104 170-236 (366)
96 1mjh_A Protein (ATP-binding do 78.0 7.2 0.00025 27.8 6.5 52 61-112 85-136 (162)
97 3e8m_A Acylneuraminate cytidyl 77.5 4.9 0.00017 28.9 5.5 75 37-119 40-119 (164)
98 2yj3_A Copper-transporting ATP 78.9 0.48 1.6E-05 38.1 0.0 80 36-121 144-224 (263)
99 1y81_A Conserved hypothetical 77.2 4.5 0.00015 30.4 5.4 41 63-106 84-124 (138)
100 1jye_A Lactose operon represso 76.8 6.1 0.00021 32.1 6.5 69 35-104 82-150 (349)
101 3skx_A Copper-exporting P-type 76.8 4.8 0.00016 30.6 5.5 76 38-120 154-230 (280)
102 3fkj_A Putative phosphosugar i 76.8 2.1 7.1E-05 36.8 3.8 45 74-118 91-138 (347)
103 3i09_A Periplasmic branched-ch 76.6 1.6 5.6E-05 35.2 3.0 68 36-105 160-230 (375)
104 3j08_A COPA, copper-exporting 76.5 3.4 0.00012 38.4 5.5 77 38-121 467-544 (645)
105 3hut_A Putative branched-chain 76.3 0.78 2.7E-05 36.6 1.0 64 36-104 159-226 (358)
106 2wm8_A MDP-1, magnesium-depend 75.8 8.7 0.0003 28.5 6.6 61 37-105 77-146 (187)
107 3sg0_A Extracellular ligand-bi 75.6 1.7 5.8E-05 34.7 2.8 64 36-104 179-246 (386)
108 3s3t_A Nucleotide-binding prot 75.4 7.4 0.00025 27.1 5.8 54 59-112 69-124 (146)
109 2gm3_A Unknown protein; AT3G01 75.1 7.9 0.00027 28.2 6.1 52 60-111 88-139 (175)
110 1usg_A Leucine-specific bindin 75.0 2.4 8.1E-05 33.4 3.5 65 36-104 158-225 (346)
111 3fj1_A Putative phosphosugar i 75.0 2.7 9.2E-05 35.9 4.1 47 74-120 93-142 (344)
112 3eaf_A ABC transporter, substr 74.9 2.2 7.6E-05 34.8 3.4 67 36-104 162-231 (391)
113 3lmz_A Putative sugar isomeras 74.9 5.9 0.0002 30.9 5.7 61 38-98 68-128 (257)
114 4evq_A Putative ABC transporte 74.0 2.2 7.7E-05 34.0 3.1 65 36-104 171-238 (375)
115 3ipc_A ABC transporter, substr 73.8 1.9 6.5E-05 34.3 2.6 65 36-104 158-225 (356)
116 1moq_A Glucosamine 6-phosphate 73.8 2.6 8.8E-05 36.0 3.6 46 74-119 101-150 (368)
117 2qu7_A Putative transcriptiona 73.7 2.3 7.9E-05 33.0 3.1 66 35-105 28-93 (288)
118 2dum_A Hypothetical protein PH 73.7 7.8 0.00027 28.0 5.8 53 59-111 78-132 (170)
119 4eyg_A Twin-arginine transloca 72.8 2 6.9E-05 34.2 2.6 63 36-103 159-228 (368)
120 3ib6_A Uncharacterized protein 72.4 17 0.00059 27.0 7.5 67 36-105 42-123 (189)
121 2d59_A Hypothetical protein PH 72.4 7.9 0.00027 29.0 5.7 45 59-106 88-132 (144)
122 3mn1_A Probable YRBI family ph 72.1 7 0.00024 29.6 5.4 76 36-119 54-134 (189)
123 3h5t_A Transcriptional regulat 71.9 3.9 0.00013 33.2 4.2 67 35-105 94-160 (366)
124 3rfu_A Copper efflux ATPase; a 70.1 4.1 0.00014 39.0 4.4 87 38-135 564-651 (736)
125 3jvd_A Transcriptional regulat 70.0 2.9 9.9E-05 33.9 3.0 61 35-105 85-145 (333)
126 4iin_A 3-ketoacyl-acyl carrier 69.9 10 0.00035 29.9 6.1 67 33-102 42-113 (271)
127 3gyb_A Transcriptional regulat 69.5 3.2 0.00011 31.9 3.0 64 35-106 26-89 (280)
128 3snr_A Extracellular ligand-bi 68.8 2 7E-05 33.8 1.8 65 36-104 155-222 (362)
129 3idf_A USP-like protein; unive 68.6 26 0.00088 24.1 7.5 57 55-113 62-118 (138)
130 2zg6_A Putative uncharacterize 68.1 8.7 0.0003 28.6 5.1 72 37-115 104-185 (220)
131 2fi1_A Hydrolase, haloacid deh 68.1 22 0.00075 25.1 7.0 64 36-106 90-162 (190)
132 3ic5_A Putative saccharopine d 68.0 7.9 0.00027 25.8 4.4 71 33-104 17-101 (118)
133 2e4u_A Metabotropic glutamate 67.8 7.1 0.00024 34.3 5.2 76 27-104 191-276 (555)
134 3lop_A Substrate binding perip 67.6 1.2 4E-05 35.9 0.1 38 67-104 191-228 (364)
135 3o21_A Glutamate receptor 3; p 67.4 11 0.00037 31.4 6.0 62 38-99 151-212 (389)
136 3saj_A Glutamate receptor 1; r 67.4 5.9 0.0002 32.5 4.3 60 38-98 149-208 (384)
137 3a1c_A Probable copper-exporti 66.8 9.9 0.00034 30.4 5.5 77 36-120 171-249 (287)
138 2l69_A Rossmann 2X3 fold prote 66.8 17 0.00057 28.7 6.6 60 38-102 20-81 (134)
139 3tbf_A Glucosamine--fructose-6 66.8 3.8 0.00013 35.4 3.2 46 74-119 103-152 (372)
140 3i45_A Twin-arginine transloca 66.5 4.9 0.00017 32.6 3.6 67 36-104 162-233 (387)
141 1byk_A Protein (trehalose oper 66.2 7.8 0.00027 29.4 4.5 66 34-105 22-88 (255)
142 3sm9_A Mglur3, metabotropic gl 65.6 8.1 0.00028 33.6 5.1 66 37-104 206-275 (479)
143 1dp4_A Atrial natriuretic pept 65.4 6.9 0.00024 32.2 4.4 60 36-98 171-232 (435)
144 4f11_A Gamma-aminobutyric acid 64.4 4.1 0.00014 33.7 2.9 63 38-104 176-241 (433)
145 2r8e_A 3-deoxy-D-manno-octulos 64.4 16 0.00056 27.3 6.0 75 37-119 62-141 (188)
146 3fvv_A Uncharacterized protein 64.4 9.4 0.00032 28.3 4.6 77 36-118 100-201 (232)
147 3n0w_A ABC branched chain amin 63.7 2.6 9E-05 34.1 1.5 67 37-105 163-233 (379)
148 3j09_A COPA, copper-exporting 63.7 11 0.00037 35.6 5.8 76 38-120 545-621 (723)
149 3lc0_A Histidyl-tRNA synthetas 63.3 5.3 0.00018 35.9 3.6 37 67-104 383-420 (456)
150 3loq_A Universal stress protei 63.3 46 0.0016 26.1 8.7 66 44-110 200-265 (294)
151 3v2g_A 3-oxoacyl-[acyl-carrier 62.0 18 0.0006 29.0 6.1 67 33-102 44-115 (271)
152 3s99_A Basic membrane lipoprot 61.4 24 0.00082 30.4 7.2 75 40-120 54-132 (356)
153 3ijr_A Oxidoreductase, short c 61.1 18 0.00062 29.2 6.1 67 33-102 60-131 (291)
154 4e3z_A Putative oxidoreductase 59.8 18 0.00062 28.4 5.7 67 33-102 39-110 (272)
155 2gmw_A D,D-heptose 1,7-bisphos 59.7 26 0.00089 26.6 6.4 19 37-55 59-77 (211)
156 3ddh_A Putative haloacid dehal 59.5 30 0.001 24.7 6.4 76 36-115 113-195 (234)
157 3i4f_A 3-oxoacyl-[acyl-carrier 59.3 15 0.00051 28.5 5.1 67 33-102 20-91 (264)
158 3mt0_A Uncharacterized protein 59.3 55 0.0019 25.7 8.5 67 45-112 38-105 (290)
159 3ctp_A Periplasmic binding pro 59.2 15 0.0005 29.4 5.2 64 35-105 81-144 (330)
160 3g13_A Putative conjugative tr 58.9 8.6 0.00029 28.9 3.6 72 41-115 6-92 (169)
161 3n1u_A Hydrolase, HAD superfam 58.8 26 0.0009 26.6 6.3 75 37-118 55-133 (191)
162 3glv_A Lipopolysaccharide core 58.7 17 0.00058 27.1 5.1 39 64-106 56-95 (143)
163 4gpa_A Glutamate receptor 4; P 58.6 12 0.00041 29.7 4.5 61 38-99 151-211 (389)
164 3osu_A 3-oxoacyl-[acyl-carrier 58.3 24 0.00081 27.4 6.1 66 33-101 17-87 (246)
165 2bpl_A Glucosamine--fructose-6 58.1 8.8 0.0003 35.2 4.1 45 74-118 341-389 (608)
166 3m1y_A Phosphoserine phosphata 57.8 6.9 0.00023 28.4 2.7 80 35-120 82-183 (217)
167 3mfq_A TROA, high-affinity zin 57.6 53 0.0018 27.3 8.5 63 38-102 175-244 (282)
168 3c3j_A Putative tagatose-6-pho 57.6 7.8 0.00027 33.3 3.5 71 39-115 74-151 (384)
169 3is3_A 17BETA-hydroxysteroid d 57.3 24 0.00083 27.8 6.1 66 33-101 31-101 (270)
170 4g84_A Histidine--tRNA ligase, 57.2 6.1 0.00021 34.2 2.8 42 36-82 385-427 (464)
171 4fe7_A Xylose operon regulator 56.7 9.1 0.00031 32.1 3.7 62 35-105 45-106 (412)
172 3m2p_A UDP-N-acetylglucosamine 56.6 7.6 0.00026 30.8 3.0 70 33-104 15-109 (311)
173 2qv7_A Diacylglycerol kinase D 56.5 16 0.00055 30.6 5.2 44 70-113 78-123 (337)
174 3fg9_A Protein of universal st 56.5 29 0.001 24.5 5.9 53 59-111 79-134 (156)
175 4g9b_A Beta-PGM, beta-phosphog 56.4 58 0.002 24.9 8.0 41 16-56 80-123 (243)
176 3dlo_A Universal stress protei 56.2 35 0.0012 24.7 6.4 50 57-106 76-127 (155)
177 3c85_A Putative glutathione-re 55.5 5.8 0.0002 29.5 2.1 62 35-96 53-130 (183)
178 3nvb_A Uncharacterized protein 55.3 29 0.00099 31.1 6.9 69 37-106 265-338 (387)
179 3kzx_A HAD-superfamily hydrola 54.9 19 0.00066 26.4 4.8 66 35-106 110-187 (231)
180 3kbb_A Phosphorylated carbohyd 54.3 45 0.0015 24.2 6.7 81 19-105 74-166 (216)
181 2p9j_A Hypothetical protein AQ 54.3 54 0.0018 23.2 7.0 75 36-118 44-123 (162)
182 3vot_A L-amino acid ligase, BL 54.1 13 0.00044 31.5 4.2 37 71-107 3-39 (425)
183 4g85_A Histidine-tRNA ligase, 53.8 9.1 0.00031 34.3 3.4 42 36-82 438-480 (517)
184 3oid_A Enoyl-[acyl-carrier-pro 53.7 30 0.001 27.3 6.1 66 33-102 17-88 (258)
185 3ilx_A First ORF in transposon 53.5 10 0.00036 28.6 3.2 69 41-114 3-79 (143)
186 1iuk_A Hypothetical protein TT 53.1 11 0.00038 28.2 3.3 44 60-106 82-125 (140)
187 1k1e_A Deoxy-D-mannose-octulos 52.9 52 0.0018 24.2 7.0 76 36-119 43-123 (180)
188 3dx5_A Uncharacterized protein 52.6 33 0.0011 26.7 6.1 62 37-98 54-138 (286)
189 3ezl_A Acetoacetyl-COA reducta 52.5 23 0.00078 27.3 5.1 66 33-101 26-96 (256)
190 3g85_A Transcriptional regulat 52.4 1.3 4.5E-05 34.3 -2.0 68 34-106 32-101 (289)
191 3qiv_A Short-chain dehydrogena 52.3 28 0.00097 26.7 5.6 67 33-103 22-93 (253)
192 3odp_A Putative tagatose-6-pho 52.3 14 0.00047 32.5 4.2 43 73-115 109-156 (393)
193 1y80_A Predicted cobalamin bin 51.9 56 0.0019 25.4 7.3 65 36-105 108-179 (210)
194 2hoq_A Putative HAD-hydrolase 51.8 33 0.0011 25.5 5.7 75 36-116 102-189 (241)
195 2qh8_A Uncharacterized protein 51.3 27 0.00091 27.6 5.4 65 35-104 28-98 (302)
196 4iiu_A 3-oxoacyl-[acyl-carrier 51.2 36 0.0012 26.6 6.1 67 33-102 39-110 (267)
197 3sc6_A DTDP-4-dehydrorhamnose 51.1 19 0.00064 27.9 4.4 70 33-105 18-107 (287)
198 1shu_X Anthrax toxin receptor 50.8 30 0.001 25.0 5.3 46 60-105 87-143 (182)
199 3m9l_A Hydrolase, haloacid deh 50.8 31 0.0011 25.0 5.3 21 36-56 78-98 (205)
200 3edm_A Short chain dehydrogena 50.7 28 0.00095 27.4 5.4 66 33-101 21-91 (259)
201 3um9_A Haloacid dehalogenase, 50.3 44 0.0015 24.1 6.1 63 36-105 104-178 (230)
202 3u5t_A 3-oxoacyl-[acyl-carrier 50.1 30 0.001 27.6 5.6 66 33-101 40-110 (267)
203 2hq1_A Glucose/ribitol dehydro 49.7 42 0.0014 25.4 6.1 66 33-102 18-89 (247)
204 2hi0_A Putative phosphoglycola 49.6 32 0.0011 25.9 5.4 65 37-106 119-192 (240)
205 4dmm_A 3-oxoacyl-[acyl-carrier 49.5 38 0.0013 26.9 6.1 67 33-102 41-112 (269)
206 1lss_A TRK system potassium up 49.5 24 0.00082 24.1 4.3 70 33-102 16-100 (140)
207 2vpz_A Thiosulfate reductase; 49.4 19 0.00065 33.6 4.9 48 72-120 199-252 (765)
208 3ibs_A Conserved hypothetical 49.2 20 0.00069 26.8 4.2 48 59-106 96-149 (218)
209 2pr7_A Haloacid dehalogenase/e 49.2 25 0.00086 23.6 4.3 19 38-56 28-46 (137)
210 3llv_A Exopolyphosphatase-rela 49.0 11 0.00038 26.7 2.6 70 33-102 18-101 (141)
211 1gee_A Glucose 1-dehydrogenase 48.7 42 0.0015 25.7 6.1 66 33-102 20-91 (261)
212 3afn_B Carbonyl reductase; alp 48.5 43 0.0015 25.4 6.0 66 33-102 20-91 (258)
213 3tjr_A Short chain dehydrogena 48.4 32 0.0011 27.9 5.6 66 33-102 44-114 (301)
214 3pct_A Class C acid phosphatas 48.3 23 0.00079 30.0 4.9 67 36-105 109-182 (260)
215 3zvl_A Bifunctional polynucleo 48.0 27 0.00092 30.3 5.3 70 37-106 96-184 (416)
216 3e48_A Putative nucleoside-dip 48.0 9.2 0.00031 29.9 2.2 32 71-102 64-103 (289)
217 3gk3_A Acetoacetyl-COA reducta 47.9 36 0.0012 26.7 5.7 67 33-102 38-109 (269)
218 2e7z_A Acetylene hydratase AHY 47.6 16 0.00054 33.7 4.0 48 71-119 159-212 (727)
219 3n28_A Phosphoserine phosphata 47.5 13 0.00045 30.3 3.2 79 36-120 186-286 (335)
220 4eze_A Haloacid dehalogenase-l 47.4 12 0.00041 31.3 3.0 80 35-120 186-287 (317)
221 1l7m_A Phosphoserine phosphata 47.2 42 0.0014 23.7 5.5 75 36-116 84-180 (211)
222 4ex6_A ALNB; modified rossman 46.8 67 0.0023 23.4 6.6 69 35-106 111-187 (237)
223 3lc0_A Histidyl-tRNA synthetas 46.7 29 0.001 31.1 5.5 41 36-81 380-420 (456)
224 4gib_A Beta-phosphoglucomutase 46.6 47 0.0016 25.4 6.0 21 36-56 124-144 (250)
225 4f82_A Thioredoxin reductase; 46.5 40 0.0014 26.7 5.8 58 60-119 70-129 (176)
226 3lft_A Uncharacterized protein 46.5 28 0.00097 27.3 4.9 65 35-104 22-91 (295)
227 3tva_A Xylose isomerase domain 46.5 73 0.0025 24.8 7.2 69 35-103 25-122 (290)
228 3v7e_A Ribosome-associated pro 46.4 70 0.0024 22.1 7.2 66 38-117 4-72 (82)
229 1tzb_A Glucose-6-phosphate iso 46.3 25 0.00085 29.1 4.7 42 74-118 81-125 (302)
230 3guv_A Site-specific recombina 46.0 32 0.0011 25.7 4.9 71 41-114 5-91 (167)
231 4fc7_A Peroxisomal 2,4-dienoyl 45.9 34 0.0012 27.2 5.3 67 33-102 40-111 (277)
232 3s6j_A Hydrolase, haloacid deh 45.9 39 0.0013 24.3 5.2 65 36-106 99-174 (233)
233 1g0o_A Trihydroxynaphthalene r 45.6 48 0.0016 26.2 6.1 67 33-102 42-113 (283)
234 3no4_A Creatininase, creatinin 45.5 23 0.00079 30.1 4.5 64 25-91 75-138 (267)
235 3p96_A Phosphoserine phosphata 45.4 25 0.00085 29.8 4.6 80 35-120 263-364 (415)
236 3ixz_A Potassium-transporting 45.3 33 0.0011 33.7 6.0 46 84-134 707-754 (1034)
237 3lyl_A 3-oxoacyl-(acyl-carrier 45.2 42 0.0014 25.6 5.6 66 33-102 18-88 (247)
238 3olq_A Universal stress protei 45.0 66 0.0023 25.3 6.8 51 61-111 75-126 (319)
239 2yxb_A Coenzyme B12-dependent 44.9 83 0.0028 24.0 7.2 64 36-105 38-108 (161)
240 3h7a_A Short chain dehydrogena 44.9 40 0.0014 26.4 5.5 58 33-94 20-77 (252)
241 2iv2_X Formate dehydrogenase H 44.8 18 0.00061 33.4 3.9 48 72-120 166-218 (715)
242 3bvp_A INT, TP901-1 integrase; 44.5 23 0.00078 25.9 3.8 71 41-114 3-87 (138)
243 2z08_A Universal stress protei 44.2 41 0.0014 23.2 4.9 40 71-112 73-115 (137)
244 3h6g_A Glutamate receptor, ion 44.2 21 0.00071 29.1 3.8 59 39-99 160-218 (395)
245 3tva_A Xylose isomerase domain 44.1 79 0.0027 24.6 7.1 63 36-98 56-154 (290)
246 3rsc_A CALG2; TDP, enediyne, s 44.0 84 0.0029 25.5 7.4 33 68-103 114-147 (415)
247 3ar4_A Sarcoplasmic/endoplasmi 43.8 28 0.00097 33.8 5.3 38 82-119 682-720 (995)
248 2i33_A Acid phosphatase; HAD s 43.8 26 0.00088 28.7 4.4 67 36-106 109-182 (258)
249 3r1i_A Short-chain type dehydr 43.6 46 0.0016 26.6 5.7 66 33-102 45-115 (276)
250 1rku_A Homoserine kinase; phos 43.1 63 0.0021 23.3 6.0 75 36-117 77-167 (206)
251 3ks9_A Mglur1, metabotropic gl 42.9 32 0.0011 30.0 5.1 69 36-106 217-293 (496)
252 1vlj_A NADH-dependent butanol 42.8 25 0.00085 30.6 4.3 75 37-112 35-118 (407)
253 3ucx_A Short chain dehydrogena 42.8 46 0.0016 26.1 5.5 66 33-102 24-94 (264)
254 3h5l_A Putative branched-chain 42.7 15 0.0005 30.3 2.7 66 37-104 185-252 (419)
255 3s40_A Diacylglycerol kinase; 41.9 36 0.0012 28.1 5.0 79 38-121 33-114 (304)
256 3dqp_A Oxidoreductase YLBE; al 41.8 20 0.00068 26.9 3.2 72 33-105 13-107 (219)
257 3tsa_A SPNG, NDP-rhamnosyltran 41.7 78 0.0027 25.5 6.8 34 69-105 111-144 (391)
258 1v7z_A Creatininase, creatinin 41.7 58 0.002 26.9 6.3 63 26-91 62-129 (260)
259 2e5f_A Hypothetical protein PH 41.7 28 0.00095 29.1 4.3 45 74-119 81-125 (325)
260 3lub_A Putative creatinine ami 41.6 77 0.0026 26.3 7.0 74 26-102 66-144 (254)
261 3rkr_A Short chain oxidoreduct 41.4 49 0.0017 25.8 5.5 66 33-102 42-112 (262)
262 4da9_A Short-chain dehydrogena 41.3 48 0.0017 26.5 5.6 66 33-102 42-113 (280)
263 1edo_A Beta-keto acyl carrier 41.3 59 0.002 24.5 5.8 66 33-102 14-85 (244)
264 2ivf_A Ethylbenzene dehydrogen 41.3 29 0.00099 33.7 4.9 48 71-119 245-297 (976)
265 3cs3_A Sugar-binding transcrip 41.2 14 0.00048 28.4 2.3 59 35-105 29-89 (277)
266 3jx9_A Putative phosphoheptose 40.9 33 0.0011 27.3 4.5 34 71-104 76-112 (170)
267 2xw6_A MGS, methylglyoxal synt 40.8 46 0.0016 25.9 5.2 61 35-99 39-108 (134)
268 4fe3_A Cytosolic 5'-nucleotida 40.7 15 0.00053 29.4 2.5 20 35-54 148-167 (297)
269 2zxe_A Na, K-ATPase alpha subu 40.6 31 0.0011 33.8 5.1 37 83-119 701-738 (1028)
270 3ff4_A Uncharacterized protein 40.5 6.3 0.00021 29.6 0.2 37 62-99 72-108 (122)
271 2go7_A Hydrolase, haloacid deh 40.3 89 0.0031 21.6 6.2 64 36-106 93-167 (207)
272 3s55_A Putative short-chain de 40.1 73 0.0025 25.1 6.3 70 33-102 23-105 (281)
273 4hqf_A Thrombospondin-related 40.0 69 0.0024 25.6 6.3 56 60-115 111-179 (281)
274 3o38_A Short chain dehydrogena 39.9 55 0.0019 25.4 5.5 67 33-102 36-107 (266)
275 1zmt_A Haloalcohol dehalogenas 39.7 34 0.0012 26.6 4.3 64 32-102 13-78 (254)
276 3gyg_A NTD biosynthesis operon 39.6 23 0.00079 27.7 3.3 34 87-120 215-252 (289)
277 1yx1_A Hypothetical protein PA 39.5 33 0.0011 26.7 4.2 19 84-102 85-103 (264)
278 3gaf_A 7-alpha-hydroxysteroid 39.4 54 0.0018 25.7 5.4 66 33-102 25-95 (256)
279 2bon_A Lipid kinase; DAG kinas 39.4 53 0.0018 27.5 5.7 23 71-93 81-103 (332)
280 4egf_A L-xylulose reductase; s 39.2 45 0.0016 26.3 5.0 67 33-102 33-104 (266)
281 2ah5_A COG0546: predicted phos 39.1 61 0.0021 23.8 5.4 62 37-106 93-164 (210)
282 2b82_A APHA, class B acid phos 39.1 13 0.00046 28.8 1.9 66 37-105 97-167 (211)
283 2fpr_A Histidine biosynthesis 39.0 49 0.0017 24.6 4.9 18 36-53 50-67 (176)
284 3qek_A NMDA glutamate receptor 38.9 13 0.00043 30.3 1.8 41 64-104 207-250 (384)
285 1q16_A Respiratory nitrate red 38.8 24 0.00082 36.2 4.1 48 72-120 246-298 (1247)
286 3ruf_A WBGU; rossmann fold, UD 38.7 60 0.002 25.9 5.7 69 33-102 38-148 (351)
287 3tzq_B Short-chain type dehydr 38.5 51 0.0018 26.0 5.2 63 33-102 24-91 (271)
288 1tp9_A Peroxiredoxin, PRX D (t 38.3 75 0.0026 23.0 5.8 55 60-116 58-114 (162)
289 2b7l_A Glycerol-3-phosphate cy 38.3 57 0.002 23.3 5.0 33 70-105 61-94 (132)
290 2o23_A HADH2 protein; HSD17B10 38.2 65 0.0022 24.6 5.6 63 33-102 25-92 (265)
291 1k77_A EC1530, hypothetical pr 38.1 87 0.003 23.8 6.3 66 36-102 45-142 (260)
292 1htt_A Histidyl-tRNA synthetas 38.1 34 0.0012 29.3 4.4 37 67-104 349-388 (423)
293 3tfo_A Putative 3-oxoacyl-(acy 38.0 58 0.002 26.1 5.5 66 33-102 17-87 (264)
294 3ab8_A Putative uncharacterize 37.9 91 0.0031 23.9 6.5 60 43-104 183-242 (268)
295 1xq1_A Putative tropinone redu 37.8 72 0.0025 24.6 5.9 65 33-101 27-97 (266)
296 3n74_A 3-ketoacyl-(acyl-carrie 37.5 55 0.0019 25.2 5.2 63 33-102 22-89 (261)
297 1zr6_A Glucooligosaccharide ox 37.5 9.6 0.00033 34.3 0.9 37 70-106 40-76 (503)
298 1nnl_A L-3-phosphoserine phosp 37.5 26 0.00089 25.8 3.2 21 36-56 94-114 (225)
299 1h0h_A Formate dehydrogenase ( 37.4 40 0.0014 32.8 5.2 47 72-119 184-235 (977)
300 3pxx_A Carveol dehydrogenase; 37.4 87 0.003 24.4 6.3 70 33-102 23-105 (287)
301 1ja9_A 4HNR, 1,3,6,8-tetrahydr 37.3 66 0.0023 24.6 5.5 57 33-93 34-91 (274)
302 2q2v_A Beta-D-hydroxybutyrate 37.2 73 0.0025 24.7 5.8 64 33-102 17-85 (255)
303 3awd_A GOX2181, putative polyo 37.2 66 0.0023 24.5 5.5 66 33-102 26-96 (260)
304 2prs_A High-affinity zinc upta 37.1 81 0.0028 25.9 6.4 48 51-102 204-252 (284)
305 1vmd_A MGS, methylglyoxal synt 37.0 64 0.0022 26.5 5.7 62 35-100 63-133 (178)
306 3iru_A Phoshonoacetaldehyde hy 37.0 1.3E+02 0.0043 22.3 8.4 69 36-106 119-196 (277)
307 1jmv_A USPA, universal stress 36.9 58 0.002 22.3 4.7 41 70-112 75-117 (141)
308 3enk_A UDP-glucose 4-epimerase 36.9 41 0.0014 26.6 4.4 67 33-102 18-84 (341)
309 2nap_A Protein (periplasmic ni 36.8 34 0.0012 31.4 4.5 48 72-120 166-220 (723)
310 3sc4_A Short chain dehydrogena 36.7 28 0.00096 27.9 3.5 70 33-102 22-99 (285)
311 3ocu_A Lipoprotein E; hydrolas 36.7 49 0.0017 28.0 5.1 67 36-105 109-182 (262)
312 1ve2_A Uroporphyrin-III C-meth 36.4 58 0.002 25.7 5.2 57 63-120 69-129 (235)
313 1ltq_A Polynucleotide kinase; 36.3 31 0.001 27.4 3.6 20 37-56 197-216 (301)
314 3l77_A Short-chain alcohol deh 36.3 38 0.0013 25.7 4.0 67 33-102 15-86 (235)
315 3obe_A Sugar phosphate isomera 36.3 1E+02 0.0034 25.0 6.7 62 38-99 83-166 (305)
316 3net_A Histidyl-tRNA synthetas 36.2 47 0.0016 29.5 5.1 74 29-104 342-430 (465)
317 2pnf_A 3-oxoacyl-[acyl-carrier 36.2 59 0.002 24.5 5.1 67 33-102 20-91 (248)
318 2xhf_A Peroxiredoxin 5; oxidor 36.1 59 0.002 25.4 5.2 58 60-119 64-123 (171)
319 3gdg_A Probable NADP-dependent 36.1 57 0.002 25.2 5.1 67 33-102 35-107 (267)
320 3e58_A Putative beta-phosphogl 36.0 1.1E+02 0.0037 21.3 6.9 20 36-55 97-116 (214)
321 2aef_A Calcium-gated potassium 35.9 40 0.0014 26.0 4.1 63 34-98 22-98 (234)
322 1xiy_A Peroxiredoxin, pfaop; a 35.9 60 0.002 25.4 5.2 58 60-119 66-125 (182)
323 3i0z_A Putative tagatose-6-pho 35.9 27 0.00092 30.6 3.5 45 72-116 109-158 (389)
324 3fwz_A Inner membrane protein 35.9 22 0.00076 25.5 2.5 28 33-60 19-46 (140)
325 3ai3_A NADPH-sorbose reductase 35.9 66 0.0023 25.0 5.4 67 33-102 20-91 (263)
326 1atz_A VON willebrand factor; 35.7 87 0.003 23.0 5.9 49 57-105 86-144 (189)
327 1b93_A Protein (methylglyoxal 35.7 49 0.0017 26.2 4.7 61 35-99 47-116 (152)
328 4ibo_A Gluconate dehydrogenase 35.7 58 0.002 25.9 5.2 66 33-102 39-109 (271)
329 2fdr_A Conserved hypothetical 35.6 91 0.0031 22.4 5.8 13 92-104 176-188 (229)
330 1vl8_A Gluconate 5-dehydrogena 35.6 64 0.0022 25.5 5.4 66 33-101 34-104 (267)
331 3uf0_A Short-chain dehydrogena 35.5 72 0.0025 25.4 5.7 65 33-102 44-112 (273)
332 3gvc_A Oxidoreductase, probabl 35.5 52 0.0018 26.4 4.9 63 33-102 42-109 (277)
333 2e0n_A Precorrin-2 C20-methylt 35.3 63 0.0021 25.9 5.4 50 70-120 94-147 (259)
334 1fmc_A 7 alpha-hydroxysteroid 35.1 63 0.0022 24.4 5.1 66 33-102 24-94 (255)
335 3gi1_A LBP, laminin-binding pr 35.1 1.9E+02 0.0066 23.9 8.7 62 38-103 191-258 (286)
336 3rja_A Carbohydrate oxidase; p 35.1 7.3 0.00025 34.9 -0.3 67 36-106 3-70 (473)
337 3v8b_A Putative dehydrogenase, 35.1 56 0.0019 26.2 5.0 66 33-102 41-111 (283)
338 2uvd_A 3-oxoacyl-(acyl-carrier 35.1 93 0.0032 23.9 6.1 66 33-102 17-88 (246)
339 2pln_A HP1043, response regula 35.0 1E+02 0.0034 20.6 7.4 62 35-106 33-96 (137)
340 1zjj_A Hypothetical protein PH 35.0 1E+02 0.0035 23.8 6.3 30 74-105 203-232 (263)
341 2ae2_A Protein (tropinone redu 34.9 82 0.0028 24.4 5.8 65 33-101 22-92 (260)
342 1zem_A Xylitol dehydrogenase; 34.8 72 0.0025 24.9 5.5 66 33-102 20-90 (262)
343 4e6p_A Probable sorbitol dehyd 34.8 64 0.0022 25.1 5.2 63 33-102 21-88 (259)
344 3nyw_A Putative oxidoreductase 34.8 53 0.0018 25.7 4.7 68 33-101 20-92 (250)
345 4hqo_A Sporozoite surface prot 34.7 92 0.0032 24.8 6.2 33 74-106 127-164 (266)
346 3t7c_A Carveol dehydrogenase; 34.6 96 0.0033 24.9 6.3 70 33-102 41-123 (299)
347 3o26_A Salutaridine reductase; 34.6 68 0.0023 24.9 5.3 67 33-102 25-97 (311)
348 1iv0_A Hypothetical protein; r 34.5 31 0.0011 25.0 3.1 27 82-108 37-68 (98)
349 2oda_A Hypothetical protein ps 34.5 45 0.0015 25.4 4.2 62 36-105 44-114 (196)
350 4fc5_A TON_0340, putative unch 34.5 24 0.00081 30.6 2.9 67 36-105 69-158 (270)
351 2wsb_A Galactitol dehydrogenas 34.5 73 0.0025 24.2 5.3 63 33-102 24-91 (254)
352 2zat_A Dehydrogenase/reductase 34.4 79 0.0027 24.5 5.6 66 33-102 27-97 (260)
353 3e8x_A Putative NAD-dependent 34.3 33 0.0011 26.0 3.4 71 33-104 34-131 (236)
354 3kd3_A Phosphoserine phosphohy 34.3 74 0.0025 22.4 5.0 21 36-56 90-110 (219)
355 3ib6_A Uncharacterized protein 34.1 1.4E+02 0.0047 21.9 7.3 47 53-106 97-145 (189)
356 4imr_A 3-oxoacyl-(acyl-carrier 34.1 73 0.0025 25.4 5.5 66 33-102 46-115 (275)
357 3ftp_A 3-oxoacyl-[acyl-carrier 34.1 57 0.002 26.0 4.9 66 33-102 41-111 (270)
358 2wfc_A Peroxiredoxin 5, PRDX5; 33.8 72 0.0025 23.8 5.2 55 60-116 54-110 (167)
359 3lf2_A Short chain oxidoreduct 33.6 77 0.0026 24.8 5.5 68 33-102 21-93 (265)
360 3s99_A Basic membrane lipoprot 33.5 53 0.0018 28.2 4.9 34 65-103 201-234 (356)
361 3iwt_A 178AA long hypothetical 33.2 46 0.0016 25.3 4.1 17 76-92 59-76 (178)
362 3p6l_A Sugar phosphate isomera 33.1 1.6E+02 0.0056 22.5 7.3 38 67-104 71-112 (262)
363 3e03_A Short chain dehydrogena 33.1 43 0.0015 26.5 4.0 70 33-102 19-96 (274)
364 3sju_A Keto reductase; short-c 33.0 78 0.0027 25.1 5.5 66 33-102 37-107 (279)
365 1spx_A Short-chain reductase f 33.0 75 0.0025 24.8 5.3 69 33-102 19-92 (278)
366 2hdo_A Phosphoglycolate phosph 32.9 1.3E+02 0.0046 21.4 6.9 61 38-105 93-164 (209)
367 2r6j_A Eugenol synthase 1; phe 32.7 74 0.0025 25.1 5.3 70 32-103 23-114 (318)
368 3icc_A Putative 3-oxoacyl-(acy 32.6 81 0.0028 24.0 5.4 58 33-94 20-78 (255)
369 3kws_A Putative sugar isomeras 32.5 80 0.0027 24.7 5.4 18 85-102 106-123 (287)
370 2pke_A Haloacid delahogenase-l 32.5 1.1E+02 0.0036 22.9 5.9 76 37-117 121-202 (251)
371 3ksu_A 3-oxoacyl-acyl carrier 32.3 71 0.0024 25.1 5.1 67 33-102 24-97 (262)
372 3k1z_A Haloacid dehalogenase-l 32.2 42 0.0014 25.8 3.7 63 36-105 114-187 (263)
373 4eso_A Putative oxidoreductase 32.2 58 0.002 25.5 4.6 54 33-93 21-74 (255)
374 3tox_A Short chain dehydrogena 32.1 55 0.0019 26.3 4.5 66 33-102 21-91 (280)
375 3sx2_A Putative 3-ketoacyl-(ac 32.1 96 0.0033 24.2 5.8 70 33-102 26-108 (278)
376 3l4b_C TRKA K+ channel protien 32.1 43 0.0015 25.6 3.7 92 33-124 12-123 (218)
377 3fdx_A Putative filament prote 32.1 1.2E+02 0.0041 20.6 6.2 28 83-111 93-120 (143)
378 3zv4_A CIS-2,3-dihydrobiphenyl 32.0 58 0.002 26.0 4.6 62 33-101 18-84 (281)
379 4id9_A Short-chain dehydrogena 32.0 19 0.00067 28.7 1.8 69 33-102 32-123 (347)
380 3kzx_A HAD-superfamily hydrola 31.9 1E+02 0.0035 22.4 5.6 49 52-106 158-207 (231)
381 2jah_A Clavulanic acid dehydro 31.9 88 0.003 24.2 5.5 66 33-102 20-90 (247)
382 1n3y_A Integrin alpha-X; alpha 31.7 54 0.0018 24.1 4.1 49 58-106 89-150 (198)
383 3hsy_A Glutamate receptor 2; l 31.7 34 0.0012 28.0 3.2 61 38-98 142-205 (376)
384 2v9y_A Phosphoribosylformylgly 31.6 1.3E+02 0.0043 25.5 6.9 72 33-105 223-306 (334)
385 1geg_A Acetoin reductase; SDR 31.6 89 0.0031 24.2 5.5 66 33-102 15-85 (256)
386 3imf_A Short chain dehydrogena 31.5 62 0.0021 25.3 4.6 66 33-102 19-89 (257)
387 2y3s_A TAML; oxidoreductase; H 31.4 31 0.001 31.4 3.2 37 70-106 56-92 (530)
388 2cfc_A 2-(R)-hydroxypropyl-COM 31.3 59 0.002 24.6 4.4 67 33-102 15-86 (250)
389 3tsc_A Putative oxidoreductase 31.3 1.3E+02 0.0043 23.7 6.4 70 33-102 24-107 (277)
390 4gnr_A ABC transporter substra 31.3 26 0.00088 27.9 2.4 69 34-104 158-228 (353)
391 3grp_A 3-oxoacyl-(acyl carrier 31.2 78 0.0027 25.1 5.2 63 33-102 40-107 (266)
392 2bvf_A 6-hydroxy-D-nicotine ox 31.1 30 0.001 30.5 2.9 37 70-106 36-72 (459)
393 3pk0_A Short-chain dehydrogena 31.1 90 0.0031 24.5 5.5 66 33-102 23-94 (262)
394 1o66_A 3-methyl-2-oxobutanoate 31.1 1.1E+02 0.0038 26.5 6.5 49 55-106 158-206 (275)
395 1eu1_A Dimethyl sulfoxide redu 31.0 36 0.0012 31.7 3.7 48 71-119 176-237 (780)
396 3qc0_A Sugar isomerase; TIM ba 30.9 72 0.0024 24.4 4.8 40 59-98 83-138 (275)
397 2ydy_A Methionine adenosyltran 30.8 32 0.0011 27.0 2.8 73 33-105 15-111 (315)
398 2ph3_A 3-oxoacyl-[acyl carrier 30.7 1E+02 0.0036 23.0 5.6 66 33-102 14-86 (245)
399 3hno_A Pyrophosphate-dependent 30.6 43 0.0015 30.4 3.9 64 40-103 69-138 (419)
400 2ipi_A Aclacinomycin oxidoredu 30.6 29 0.001 31.3 2.9 37 70-106 53-89 (521)
401 2b0c_A Putative phosphatase; a 30.5 96 0.0033 22.0 5.1 20 36-55 99-118 (206)
402 1s4d_A Uroporphyrin-III C-meth 30.4 78 0.0027 26.0 5.3 58 63-121 83-144 (280)
403 1w6u_A 2,4-dienoyl-COA reducta 30.1 93 0.0032 24.4 5.4 66 33-101 39-109 (302)
404 1v7p_C Integrin alpha-2; snake 29.8 47 0.0016 24.9 3.5 47 58-104 87-145 (200)
405 3v2h_A D-beta-hydroxybutyrate 29.7 96 0.0033 24.7 5.6 68 33-102 38-110 (281)
406 2b2x_A Integrin alpha-1; compu 29.7 43 0.0015 25.6 3.3 33 73-105 125-162 (223)
407 1vl0_A DTDP-4-dehydrorhamnose 29.6 35 0.0012 26.4 2.9 70 33-105 25-114 (292)
408 3bfj_A 1,3-propanediol oxidore 29.6 46 0.0016 28.5 3.8 73 33-106 17-103 (387)
409 3tx1_A UDP-N-acetylenolpyruvoy 29.5 35 0.0012 29.4 3.1 36 72-107 54-89 (322)
410 1h4v_B Histidyl-tRNA synthetas 29.4 1.8E+02 0.0061 24.8 7.5 36 67-104 350-386 (421)
411 1nu0_A Hypothetical protein YQ 29.4 46 0.0016 25.6 3.4 27 81-107 38-69 (138)
412 2r91_A 2-keto-3-deoxy-(6-phosp 29.3 86 0.0029 26.0 5.3 47 59-106 19-73 (286)
413 1ijb_A VON willebrand factor; 29.1 1.1E+02 0.0038 23.0 5.6 49 58-106 96-156 (202)
414 2zay_A Response regulator rece 29.1 1.3E+02 0.0045 20.2 5.7 67 33-107 21-93 (147)
415 4dyv_A Short-chain dehydrogena 29.1 76 0.0026 25.3 4.8 63 33-102 41-108 (272)
416 3m84_A Phosphoribosylformylgly 29.1 1.3E+02 0.0046 25.6 6.6 72 33-105 257-341 (350)
417 2ybo_A Methyltransferase; SUMT 29.0 83 0.0028 26.2 5.2 56 64-120 94-153 (294)
418 2hmt_A YUAA protein; RCK, KTN, 29.0 22 0.00076 24.3 1.4 31 72-102 70-102 (144)
419 3l12_A Putative glycerophospho 28.9 87 0.003 25.9 5.3 49 35-97 259-310 (313)
420 1q77_A Hypothetical protein AQ 28.8 1E+02 0.0034 21.1 4.8 31 73-105 88-118 (138)
421 2wdx_A Putative hexose oxidase 28.8 33 0.0011 31.1 2.9 66 38-106 25-91 (523)
422 3kvo_A Hydroxysteroid dehydrog 28.7 50 0.0017 27.9 3.9 70 33-102 58-135 (346)
423 1wu7_A Histidyl-tRNA synthetas 28.6 41 0.0014 29.1 3.4 42 36-82 351-392 (434)
424 3rag_A Uncharacterized protein 28.6 77 0.0026 26.9 5.0 37 68-104 5-46 (242)
425 4dcc_A Putative haloacid dehal 28.5 93 0.0032 22.9 4.9 19 37-56 121-139 (229)
426 1wyz_A Putative S-adenosylmeth 28.4 28 0.00095 28.1 2.1 58 64-123 75-138 (242)
427 3ia7_A CALG4; glycosysltransfe 28.4 1.8E+02 0.0063 23.0 6.9 34 67-103 97-131 (402)
428 2duw_A Putative COA-binding pr 28.4 25 0.00086 26.3 1.8 34 70-106 92-125 (145)
429 2xgg_A Microneme protein 2; A/ 28.4 1.7E+02 0.0059 21.4 6.4 49 58-106 101-161 (178)
430 3svt_A Short-chain type dehydr 28.4 78 0.0027 25.0 4.7 69 33-102 24-97 (281)
431 1uxy_A MURB, uridine diphospho 28.4 44 0.0015 29.0 3.5 35 73-107 15-49 (340)
432 3i1j_A Oxidoreductase, short c 28.3 69 0.0024 24.4 4.3 67 33-102 27-100 (247)
433 3p9x_A Phosphoribosylglycinami 28.3 72 0.0024 26.2 4.6 31 73-104 30-60 (211)
434 3f1l_A Uncharacterized oxidore 28.2 92 0.0031 24.2 5.1 67 33-102 25-98 (252)
435 1rdu_A Conserved hypothetical 28.2 67 0.0023 22.7 4.0 40 24-65 63-102 (116)
436 2x2e_A Dynamin-1; nitration, h 28.2 94 0.0032 25.9 5.4 48 60-107 155-208 (353)
437 3loq_A Universal stress protei 28.1 85 0.0029 24.6 4.9 48 58-106 85-133 (294)
438 3l2b_A Probable manganase-depe 28.1 83 0.0028 24.2 4.7 35 67-101 135-169 (245)
439 2gm5_A Transposon gamma-delta 28.0 29 0.00099 25.7 2.0 50 60-113 14-71 (139)
440 3qlj_A Short chain dehydrogena 28.0 1.3E+02 0.0043 24.5 6.0 65 33-101 40-119 (322)
441 3umb_A Dehalogenase-like hydro 27.9 1.5E+02 0.0052 21.3 5.9 20 36-55 107-126 (233)
442 3tpc_A Short chain alcohol deh 27.9 57 0.0019 25.3 3.8 63 33-102 20-87 (257)
443 1pt6_A Integrin alpha-1; cell 27.8 46 0.0016 25.1 3.2 33 73-105 110-147 (213)
444 1w3i_A EDA, 2-keto-3-deoxy glu 27.7 1E+02 0.0035 25.7 5.6 47 59-106 20-74 (293)
445 1wma_A Carbonyl reductase [NAD 27.7 74 0.0025 24.0 4.3 65 33-101 17-87 (276)
446 3cnh_A Hydrolase family protei 27.6 1.2E+02 0.0041 21.5 5.2 20 36-56 94-113 (200)
447 3l6e_A Oxidoreductase, short-c 27.6 99 0.0034 23.9 5.1 63 33-102 16-83 (235)
448 2nuw_A 2-keto-3-deoxygluconate 27.6 86 0.003 26.1 5.1 47 59-106 20-74 (288)
449 3m1a_A Putative dehydrogenase; 27.6 1.2E+02 0.0041 23.6 5.7 63 33-102 18-85 (281)
450 3net_A Histidyl-tRNA synthetas 27.6 36 0.0012 30.2 2.9 43 35-82 389-431 (465)
451 3rwb_A TPLDH, pyridoxal 4-dehy 27.4 79 0.0027 24.6 4.6 63 33-102 19-86 (247)
452 3pop_A GILR oxidase; FAD bindi 27.4 39 0.0013 30.7 3.1 37 70-106 32-68 (501)
453 1i60_A IOLI protein; beta barr 27.3 1.4E+02 0.0046 22.7 5.8 45 36-80 51-105 (278)
454 2kpo_A Rossmann 2X2 fold prote 27.3 73 0.0025 24.3 4.2 58 42-104 24-85 (110)
455 1iy8_A Levodione reductase; ox 27.3 1.1E+02 0.0038 23.8 5.4 68 33-102 26-98 (267)
456 3uma_A Hypothetical peroxiredo 27.3 93 0.0032 23.9 4.9 56 60-117 79-136 (184)
457 4g9b_A Beta-PGM, beta-phosphog 27.2 1.7E+02 0.0058 22.2 6.3 50 51-106 147-196 (243)
458 2qbu_A Precorrin-2 methyltrans 27.2 1.5E+02 0.0053 22.9 6.2 50 70-120 92-145 (232)
459 1mxh_A Pteridine reductase 2; 27.1 1.2E+02 0.0041 23.6 5.6 67 33-102 24-100 (276)
460 1m65_A Hypothetical protein YC 27.1 43 0.0015 25.8 3.0 27 80-106 13-41 (245)
461 1kqf_A FDH-N alpha, formate de 27.1 53 0.0018 32.1 4.2 71 72-146 222-303 (1015)
462 2wm3_A NMRA-like family domain 27.1 50 0.0017 25.9 3.3 72 33-105 18-115 (299)
463 1tmo_A TMAO reductase, trimeth 27.0 48 0.0017 31.1 3.8 47 72-119 210-274 (829)
464 3ay3_A NAD-dependent epimerase 27.0 63 0.0021 24.9 3.9 71 33-104 15-110 (267)
465 1ccw_A Protein (glutamate muta 27.0 1.4E+02 0.0049 21.9 5.7 63 37-105 24-93 (137)
466 1rrm_A Lactaldehyde reductase; 26.9 69 0.0024 27.3 4.5 77 37-114 23-107 (386)
467 1ae1_A Tropinone reductase-I; 26.9 1.3E+02 0.0046 23.5 5.9 56 33-92 34-89 (273)
468 4e51_A Histidine--tRNA ligase; 26.8 50 0.0017 29.5 3.7 42 36-82 373-418 (467)
469 1evl_A Threonyl-tRNA synthetas 26.7 50 0.0017 28.3 3.5 36 68-104 321-357 (401)
470 3pgx_A Carveol dehydrogenase; 26.6 1.5E+02 0.0052 23.3 6.1 70 33-102 28-111 (280)
471 1id1_A Putative potassium chan 26.6 77 0.0026 22.7 4.1 22 33-54 15-36 (153)
472 1ti6_A Pyrogallol hydroxytrans 26.6 53 0.0018 31.2 4.0 47 71-119 207-265 (875)
473 1yb1_A 17-beta-hydroxysteroid 26.6 1.2E+02 0.0041 23.7 5.5 66 33-102 44-114 (272)
474 2ioj_A Hypothetical protein AF 26.5 49 0.0017 24.2 3.0 51 44-102 53-104 (139)
475 3ppi_A 3-hydroxyacyl-COA dehyd 26.5 81 0.0028 24.7 4.5 55 33-94 43-97 (281)
476 3ihk_A Thiamin pyrophosphokina 26.3 49 0.0017 26.9 3.3 66 35-104 27-97 (218)
477 3nrc_A Enoyl-[acyl-carrier-pro 26.2 84 0.0029 24.8 4.6 65 32-102 40-109 (280)
478 1o97_C Electron transferring f 26.1 1.9E+02 0.0065 24.0 6.9 57 46-106 58-122 (264)
479 1mf7_A Integrin alpha M; cell 26.0 45 0.0016 24.6 2.8 51 56-106 83-146 (194)
480 2ew8_A (S)-1-phenylethanol deh 25.9 1.3E+02 0.0044 23.2 5.5 63 33-102 20-88 (249)
481 1jdp_A NPR-C, atrial natriuret 25.9 42 0.0014 27.8 2.8 69 27-98 159-237 (441)
482 2q02_A Putative cytoplasmic pr 25.9 1.8E+02 0.006 22.2 6.2 22 60-81 86-107 (272)
483 1mhs_A Proton pump, plasma mem 25.8 50 0.0017 32.6 3.8 35 86-120 616-651 (920)
484 4dw8_A Haloacid dehalogenase-l 25.7 17 0.00059 28.0 0.4 35 86-120 200-238 (279)
485 3av3_A Phosphoribosylglycinami 25.7 1.8E+02 0.0061 23.3 6.5 51 49-104 9-61 (212)
486 1hdc_A 3-alpha, 20 beta-hydrox 25.6 74 0.0025 24.8 4.1 63 33-102 18-85 (254)
487 3ngf_A AP endonuclease, family 25.5 2.1E+02 0.0071 22.2 6.7 65 37-102 54-149 (269)
488 2rhc_B Actinorhodin polyketide 25.5 1.4E+02 0.0046 23.6 5.7 65 33-101 35-104 (277)
489 3a28_C L-2.3-butanediol dehydr 25.3 1.6E+02 0.0056 22.7 6.0 66 33-102 15-87 (258)
490 3vps_A TUNA, NAD-dependent epi 25.3 75 0.0026 24.6 4.0 70 33-102 20-116 (321)
491 3qnm_A Haloacid dehalogenase-l 25.2 1.9E+02 0.0064 20.7 6.1 73 36-115 115-200 (240)
492 2lqo_A Putative glutaredoxin R 25.2 84 0.0029 22.1 4.0 39 68-106 24-65 (92)
493 1hxh_A 3BETA/17BETA-hydroxyste 25.2 1.2E+02 0.004 23.5 5.1 62 33-101 19-85 (253)
494 3nas_A Beta-PGM, beta-phosphog 25.2 1.2E+02 0.004 22.0 4.9 63 36-106 100-173 (233)
495 3lm8_A Thiamine pyrophosphokin 25.0 60 0.0021 26.5 3.6 64 35-102 33-99 (222)
496 3pqc_A Probable GTP-binding pr 24.9 80 0.0027 22.3 3.8 37 71-107 103-144 (195)
497 3kg2_A Glutamate receptor 2; I 24.9 56 0.0019 29.5 3.7 61 38-98 142-205 (823)
498 1vhv_A Diphthine synthase; str 24.8 80 0.0027 25.7 4.3 50 72-122 87-140 (268)
499 3u9l_A 3-oxoacyl-[acyl-carrier 24.6 1.7E+02 0.0058 24.1 6.3 67 33-102 18-93 (324)
500 3rih_A Short chain dehydrogena 24.5 1.4E+02 0.0047 24.2 5.7 66 33-102 54-125 (293)
No 1
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=98.73 E-value=1.8e-08 Score=78.67 Aligned_cols=87 Identities=18% Similarity=0.089 Sum_probs=70.6
Q ss_pred chhHhhhcceEEEecCCC-------cchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-CCcEEEEccC--
Q 039912 36 LIGELKRGGLWVRTASDK-------PQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-CLKTVVVGDI-- 105 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdK-------PqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-~l~TVVVGd~-- 105 (198)
+-..|++.||.|++.+-+ -.+.|.+|-=.++.+. ..++++||||-|+||+++++.+|++ |.+.+|+|=.
T Consensus 66 ~~~~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a-~~~d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~~~ 144 (165)
T 2qip_A 66 FHHILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIA-PDVDRVILVSGDGDFSLLVERIQQRYNKKVTVYGVPRL 144 (165)
T ss_dssp HHHHHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHG-GGCSEEEEECCCGGGHHHHHHHHHHHCCEEEEEECGGG
T ss_pred HHHHHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhh-ccCCEEEEEECChhHHHHHHHHHHHcCcEEEEEeCCCc
Confidence 346788999998864321 2499999988888664 6899999999999999999999997 9999999942
Q ss_pred CCccccchhcccccHHHH
Q 039912 106 NDGALKRISYACFSWWDI 123 (198)
Q Consensus 106 ~~~~L~R~AD~~fsW~eV 123 (198)
....|.+.||-++..+++
T Consensus 145 ~s~~L~~~ad~fi~l~~~ 162 (165)
T 2qip_A 145 TSQTLIDCADNFVAIDDD 162 (165)
T ss_dssp SCHHHHHHSSEEEECSGG
T ss_pred ChHHHHHhCCEEEecchh
Confidence 236799999988877654
No 2
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=94.62 E-value=0.081 Score=39.93 Aligned_cols=97 Identities=22% Similarity=0.182 Sum_probs=64.9
Q ss_pred hHHHHHHHHhccCCCC----CCC--------chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-
Q 039912 17 MEKYKRAARAVLTPEV----GNG--------LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS- 83 (198)
Q Consensus 17 ~~KY~~AAr~lltPkv----gyG--------La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds- 83 (198)
.+..++++..+...+- |.| ++.-|.+.|..|..+++-+.. +...+..+ . .=++++++|-.-
T Consensus 26 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~----~~~~~~~~-~-~~d~~i~iS~sG~ 99 (187)
T 3sho_A 26 PEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGST----LTITLANL-R-PTDLMIGVSVWRY 99 (187)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHH----HHHHHHTC-C-TTEEEEEECCSSC
T ss_pred HHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchh----HHHHHhcC-C-CCCEEEEEeCCCC
Confidence 4556667666655443 555 345678999999987732211 11111122 2 236777777643
Q ss_pred --chHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 84 --DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 84 --dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+...+++.|+++|+++|+|-+.....|.+.||+.+.
T Consensus 100 t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~ 137 (187)
T 3sho_A 100 LRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLV 137 (187)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEE
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEE
Confidence 556677889999999999999777899999998875
No 3
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=94.42 E-value=0.14 Score=39.69 Aligned_cols=70 Identities=10% Similarity=0.081 Sum_probs=51.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeC-CcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSD-DSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSD-dsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.||+.+- .+.+.++++.+++.++..|+++...
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 99 (293)
T 3l6u_A 29 AFKAEAKANKYEALVATSQNSRI--SEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMI 99 (293)
T ss_dssp HHHHHHHHTTCEEEEEECSSCHH--HHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHcCCEEEEECCCCCHH--HHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCC
Confidence 56778888899888765443332 2234555667899999999864 4456689999999999999998754
No 4
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=94.39 E-value=0.15 Score=38.97 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=51.2
Q ss_pred CchhHhhhcceEEEecCC--CcchHHHHHHHHHHHHhhcC-ccEEEEEeCC-cchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASD--KPQATDVLLRNHLVITHKRR-IEYLVVVSDD-SDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsd--KPqAAD~ALkrhm~~m~~~g-v~clvLVSDd-sdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+..... ..... ...+.+..+.+++ ++.|++.+-+ ....+.++.+++.++..|+++...
T Consensus 21 gi~~~~~~~g~~~~~~~~~~~~~~~--~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~ 94 (276)
T 3ksm_A 21 GAQKAADEAGVTLLHRSTKDDGDIA--GQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL 94 (276)
T ss_dssp HHHHHHHHHTCEEEECCCSSTTCHH--HHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHcCCEEEEECCCCCCCHH--HHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 566788888999987652 12222 2234555666888 9999998854 467889999999999999998653
No 5
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=94.33 E-value=0.15 Score=39.67 Aligned_cols=68 Identities=15% Similarity=0.071 Sum_probs=52.5
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+........... ..+.+..+.+++++.||+.+-+. .+.++.+++.++..|+|+...
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~~ 95 (276)
T 3jy6_A 28 GISSILESRGYIGVLFDANADIER--EKTLLRAIGSRGFDGLILQSFSN--PQTVQEILHQQMPVVSVDREM 95 (276)
T ss_dssp HHHHHHHTTTCEEEEEECTTCHHH--HHHHHHHHHTTTCSEEEEESSCC--HHHHHHHHTTSSCEEEESCCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHH--HHHHHHHHHhCCCCEEEEecCCc--HHHHHHHHHCCCCEEEEeccc
Confidence 567788899999887655444332 23444567789999999998887 889999999999999998753
No 6
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=94.13 E-value=0.12 Score=41.90 Aligned_cols=70 Identities=13% Similarity=0.070 Sum_probs=53.1
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhh--cCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHK--RRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~--~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... --.+++..++. .+++.||++++.....++++.+++.|+..|.|+...
T Consensus 25 g~~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (350)
T 3h75_A 25 FMQAAARDLGLDLRILYAERDPQ--NTLQQARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPL 96 (350)
T ss_dssp HHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCC
T ss_pred HHHHHHHHcCCeEEEEECCCCHH--HHHHHHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCC
Confidence 66777888899888764443333 22345556667 599999999877778899999999999999998754
No 7
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=93.98 E-value=0.11 Score=39.79 Aligned_cols=70 Identities=19% Similarity=0.065 Sum_probs=51.6
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.||+.+-++.-.+.++.+++.++..|+++...
T Consensus 23 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 92 (272)
T 3o74_A 23 QLEQGARARGYQLLIASSDDQPD--SERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRL 92 (272)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCC
Confidence 56678888899888765443332 22344456778999999998876445778889999999999998753
No 8
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=93.44 E-value=0.27 Score=38.02 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=52.3
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc----chHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS----DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds----dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.||+.+-++ .-.++++.+++.++..|+++...
T Consensus 36 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 109 (298)
T 3tb6_A 36 GIESYLSEQGYSMLLTSTNNNPD--NERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASY 109 (298)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecCc
Confidence 77888999999998765443332 224445567789999999987654 34578899999999999998653
No 9
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=93.42 E-value=0.26 Score=38.63 Aligned_cols=70 Identities=9% Similarity=-0.012 Sum_probs=50.8
Q ss_pred CchhHhhhcceEEEecC-CCcchHHHHHHHHHHHHhhcCccEEEEEeCC-cchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTAS-DKPQATDVLLRNHLVITHKRRIEYLVVVSDD-SDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVs-dKPqAAD~ALkrhm~~m~~~gv~clvLVSDd-sdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+..+. ...... ...+.+..+.+++++.||+.+-+ +.+.+.++.+++.|+..|+++...
T Consensus 25 gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (305)
T 3g1w_A 25 GFEDAAQALNVTVEYRGAAQYDIQ--EQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGA 96 (305)
T ss_dssp HHHHHHHHHTCEEEEEECSSSCHH--HHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHcCCEEEEeCCCcCCHH--HHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 66778888999988732 222222 22344556678899999998744 457889999999999999998653
No 10
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=93.39 E-value=0.24 Score=38.47 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=49.2
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+.+.......... .-.+.+..+..++++.|++.+-++ ...+.++.++++++..|+++..
T Consensus 21 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i~~~ 91 (271)
T 2dri_A 21 DGAQKEADKLGYNLVVLDSQNNPA--KELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQ 91 (271)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCcEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCcEEEecCC
Confidence 366778888998887543322222 223445567789999999976443 4457889999999999999764
No 11
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=93.28 E-value=0.24 Score=38.39 Aligned_cols=70 Identities=10% Similarity=0.017 Sum_probs=51.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC-cchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD-SDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd-sdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... .-.+.+..+..++++.||+.+-+ +...+.++.+++.++..|+++...
T Consensus 26 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (291)
T 3l49_A 26 AQIAEIERLGGTAIALDAGRNDQ--TQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTAT 96 (291)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHcCCEEEEEcCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCC
Confidence 66778888999988764433332 12334446668899999998776 457789999999999999998654
No 12
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=93.22 E-value=0.3 Score=37.93 Aligned_cols=69 Identities=7% Similarity=-0.016 Sum_probs=47.7
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.+........ ...+.+..+..++++.|++.+-++ .+.++++.+++.++..|+++..
T Consensus 23 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (290)
T 2fn9_A 23 TAKQRAEQLGYEATIFDSQNDTA--KESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRG 92 (290)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHcCCEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 55667778888876543322221 223345566688999999987554 4668899999999999999764
No 13
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=93.21 E-value=0.3 Score=39.29 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=48.9
Q ss_pred CchhHhhhcceEEEecC-CCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc-hHHHHHHHHhcCCcEEEEcc
Q 039912 35 GLIGELKRGGLWVRTAS-DKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD-FVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVs-dKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd-F~~~Lr~Ar~r~l~TVVVGd 104 (198)
|+..+++..|+.+.... .....+ .-.+++..|+.++++.||+.+-+++ ..++++.|+++|+..|.++-
T Consensus 24 g~~~~~~~~g~~~~~~~~~~~d~~--~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~ 93 (316)
T 1tjy_A 24 GAQEAGKALGIDVTYDGPTEPSVS--GQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDS 93 (316)
T ss_dssp HHHHHHHHHTCEEEECCCSSCCHH--HHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHhCCEEEEECCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecC
Confidence 55667788898887642 222222 2234556777899999999876654 57899999999999988864
No 14
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=93.11 E-value=0.3 Score=38.66 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=51.5
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... .-.+.+..+.+++++.||+.+-++ .+.+.++.+++.++..|+++...
T Consensus 23 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 93 (313)
T 3m9w_A 23 IFVKKAESLGAKVFVQSANGNEE--TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 93 (313)
T ss_dssp HHHHHHHHTSCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCC
T ss_pred HHHHHHHHcCCEEEEECCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcC
Confidence 67788888999887654432222 223444567789999999987655 46899999999999999998754
No 15
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=93.09 E-value=0.3 Score=38.16 Aligned_cols=69 Identities=13% Similarity=0.177 Sum_probs=48.2
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC-cchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD-SDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd-sdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+-......... .-.+.+..+.+++++-|++.+-+ +...+.++.++++++..|+++..
T Consensus 22 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (283)
T 2ioy_A 22 GAEEKAKELGYKIIVEDSQNDSS--KELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITIDRS 91 (283)
T ss_dssp HHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHhcCcEEEEecCCCCHH--HHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEecCC
Confidence 56677888898887654332222 12334556668899999987654 44567889999999999999753
No 16
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=93.01 E-value=0.24 Score=38.96 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=48.8
Q ss_pred CchhHhhhcceEEEecC--CCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTAS--DKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVs--dKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.... ...... ...+.+..+..++++.|++++-++ .+.+.++.++++++..|+++..
T Consensus 22 gi~~~a~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (288)
T 1gud_A 22 GIEDEAKTLGVSVDIFASPSEGDFQ--SQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 93 (288)
T ss_dssp HHHHHHHHHTCCEEEEECSSTTCHH--HHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHHcCCEEEEeCCCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEECCC
Confidence 67788889998876543 222221 223445566788999999987554 4568899999999999999753
No 17
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=92.81 E-value=0.42 Score=37.32 Aligned_cols=67 Identities=16% Similarity=0.037 Sum_probs=49.9
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc-hHHHHHHHHhcCCcEEEEcc
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD-FVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd-F~~~Lr~Ar~r~l~TVVVGd 104 (198)
|+..++++.|+.+.+... .... .-.+.+..++.++++-||+.+-+++ ..+.++.+++.|+..|+++.
T Consensus 23 gi~~~a~~~g~~~~~~~~-~~~~--~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 23 FADKAGKDLGFEVIKIAV-PDGE--KTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp HHHHHHHHHTEEEEEEEC-CSHH--HHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHcCCEEEEeCC-CCHH--HHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeCC
Confidence 566778888998876544 2222 2344556777889999999987665 56679999999999999983
No 18
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=92.65 E-value=0.32 Score=38.52 Aligned_cols=70 Identities=14% Similarity=0.194 Sum_probs=51.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.+........ .-.+.+..+..++++-||+.+-++ .+.+.++.+++.|+..|+|+...
T Consensus 24 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 94 (330)
T 3uug_A 24 NIVKQLQEAGYKTDLQYADDDIP--NQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLI 94 (330)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHHcCCEEEEeeCCCCHH--HHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCC
Confidence 56778888899887655333322 223455566688999999987665 57889999999999999998654
No 19
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=92.54 E-value=0.31 Score=39.09 Aligned_cols=67 Identities=10% Similarity=0.095 Sum_probs=47.2
Q ss_pred CchhHhhhcceEEEec---CC---CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTA---SD---KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtV---sd---KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+... ++ .|+ .....+..+.+++++.||+.++.....+.++.+.++++..|++.|.
T Consensus 65 gi~~~a~~~g~~~~~~~~~~~~~~~~~----~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ip~V~~~~~ 137 (342)
T 1jx6_A 65 SFEKRLYKLNINYQLNQVFTRPNADIK----QQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI 137 (342)
T ss_dssp HHHHHHHHTTCCEEEEEEECCTTCCHH----HHHHHHHHHHHTTCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETC
T ss_pred HHHHHHHHcCCeEEEEecCCCCccCHH----HHHHHHHHHHhcCCCEEEEeCChHhHHHHHHHHHHcCCCEEEEecC
Confidence 7788899999866543 22 222 2233455666889999999554444578899999999999999554
No 20
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=92.44 E-value=0.43 Score=38.43 Aligned_cols=70 Identities=11% Similarity=-0.033 Sum_probs=51.9
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... .-.+.+..+..++++.||+.+.+.+-..+++.+++.++..|+++-..
T Consensus 84 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 153 (338)
T 3dbi_A 84 HAARMAEEKGRQLLLADGKHSAE--EERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRL 153 (338)
T ss_dssp HHHHHHHHTTCEEEEEECTTSHH--HHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCCC
Confidence 67788999999987655433322 12334456668999999999877666778888999999999998643
No 21
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=92.32 E-value=0.36 Score=38.19 Aligned_cols=70 Identities=11% Similarity=0.098 Sum_probs=49.1
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc-hHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD-FVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd-F~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+.+.......... ...+.+..+..++++-||+.+-+.. +.+.++.+++.++..|+++..
T Consensus 22 ~gi~~~a~~~g~~l~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (306)
T 2vk2_A 22 NVAKSEAEKRGITLKIADGQQKQE--NQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRS 92 (306)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEecCC
Confidence 356677888898887654322222 2234445666889999999876543 568899999999999999764
No 22
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=92.10 E-value=0.44 Score=37.39 Aligned_cols=69 Identities=22% Similarity=0.056 Sum_probs=47.4
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHH---HHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRN---HLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkr---hm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+.+.......... ...+ .+..+..++++.|++.+-+.+ .+.++.+++.++..|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 99 (290)
T 2rgy_A 28 KQTDLELRAVHRHVVVATGCGEST--PREQALEAVRFLIGRDCDGVVVISHDLH-DEDLDELHRMHPKMVFLNRA 99 (290)
T ss_dssp HHHHHHHHHTTCEEEEECCCSSSC--HHHHHHHHHHHHHHTTCSEEEECCSSSC-HHHHHHHHHHCSSEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchh--hhhhHHHHHHHHHhcCccEEEEecCCCC-HHHHHHHhhcCCCEEEEccc
Confidence 366778888898876543322221 1122 344666889999999876555 57788888899999999764
No 23
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=92.02 E-value=0.11 Score=39.08 Aligned_cols=48 Identities=13% Similarity=0.192 Sum_probs=39.6
Q ss_pred CccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 72 RIEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 72 gv~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
.=++++++|-. .+..++++.|+++|.++|.|-+..+..|.+.||..|.
T Consensus 110 ~~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~ 160 (188)
T 1tk9_A 110 EKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLV 160 (188)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEE
Confidence 34778888863 5567788899999999999998767889999998773
No 24
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=92.00 E-value=0.54 Score=36.95 Aligned_cols=69 Identities=9% Similarity=0.029 Sum_probs=47.5
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+.+.......... ...+.+..+..++++.||+.+-+.. .+.++.+++.++..|+++..
T Consensus 36 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 104 (289)
T 2fep_A 36 RGIEDIATMYKYNIILSNSDQNME--KELHLLNTMLGKQVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASV 104 (289)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHHSSSCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHHhcCCCEEEEccc
Confidence 466778888898886543322221 2233445666899999999875433 56788888899999999764
No 25
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=92.00 E-value=0.18 Score=38.28 Aligned_cols=48 Identities=13% Similarity=0.181 Sum_probs=39.5
Q ss_pred CccEEEEEeCCc---chHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 72 RIEYLVVVSDDS---DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 72 gv~clvLVSDds---dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
.=++++++|-.- +...+++.|+++|.++|.|-+..+..|.+.||..+.
T Consensus 116 ~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~ 166 (198)
T 2xbl_A 116 EGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLE 166 (198)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEE
Confidence 447788888643 567788889999999999999777889999998773
No 26
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=91.88 E-value=0.46 Score=36.98 Aligned_cols=70 Identities=9% Similarity=0.036 Sum_probs=47.7
Q ss_pred CCchhHhhhcce-EEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc-hHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGL-WVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD-FVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv-~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd-F~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+ .+.......... ...+.+..+.+++++.||+.+-+.. ..++++.+++.++..|+++..
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (309)
T 2fvy_A 22 KAIEQDAKAAPDVQLLMNDSQNDQS--KQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKE 93 (309)
T ss_dssp HHHHHHHHTCTTEEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSC
T ss_pred HHHHHHHHhcCCeEEEEecCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecCC
Confidence 356677788886 665543221111 2233444666889999999876554 468899999999999999764
No 27
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=91.80 E-value=0.42 Score=36.69 Aligned_cols=69 Identities=7% Similarity=0.022 Sum_probs=47.4
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+.+.......... ...+.+..+..++++.|++.+-+.+ .++++.+++.++..|+++..
T Consensus 23 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 91 (275)
T 3d8u_A 23 PSFQQALNKAGYQLLLGYSDYSIE--QEEKLLSTFLESRPAGVVLFGSEHS-QRTHQLLEASNTPVLEIAEL 91 (275)
T ss_dssp HHHHHHHHHTSCEECCEECTTCHH--HHHHHHHHHHTSCCCCEEEESSCCC-HHHHHHHHHHTCCEEEESSS
T ss_pred HHHHHHHHHCCCEEEEEcCCCCHH--HHHHHHHHHHhcCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEeec
Confidence 366777888898876543322222 1233445667899999999876543 47788888899999999764
No 28
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=91.70 E-value=0.49 Score=36.63 Aligned_cols=69 Identities=9% Similarity=0.181 Sum_probs=49.9
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... .....+..+.+++++.||+++-+.+ .+.++.+++.++..|+|+-..
T Consensus 34 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~~ 102 (292)
T 3k4h_A 34 GISSFAHVEGYALYMSTGETEEE--IFNGVVKMVQGRQIGGIILLYSREN-DRIIQYLHEQNFPFVLIGKPY 102 (292)
T ss_dssp HHHHHHHHTTCEEEECCCCSHHH--HHHHHHHHHHTTCCCEEEESCCBTT-CHHHHHHHHTTCCEEEESCCS
T ss_pred HHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHHCCCCEEEECCCC
Confidence 67788899999998765443322 2233444677899999999764433 378889999999999998653
No 29
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=91.36 E-value=0.71 Score=36.33 Aligned_cols=71 Identities=10% Similarity=0.006 Sum_probs=51.5
Q ss_pred CCchhHhhhcceEEEecCCC--cchHHHHHHHHHHHHhhcCccEEEEEeC-CcchHHHHHHHHhcCCcEEEEccCC
Q 039912 34 NGLIGELKRGGLWVRTASDK--PQATDVLLRNHLVITHKRRIEYLVVVSD-DSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdK--PqAAD~ALkrhm~~m~~~gv~clvLVSD-dsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|+..++++.|+.+...... -... ...+.+..+..++++.||+.+- ...+.+.++.+++.|+..|.++...
T Consensus 23 ~gi~~~a~~~g~~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (297)
T 3rot_A 23 QGAKKAAEELKVDLQILAPPGANDVP--KQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRP 96 (297)
T ss_dssp HHHHHHHHHHTCEEEEECCSSSCCHH--HHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCC
T ss_pred HHHHHHHHHhCcEEEEECCCCcCCHH--HHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 46677888889999875532 1222 2335555677899999998764 4556889999999999999998654
No 30
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=91.35 E-value=0.38 Score=37.23 Aligned_cols=69 Identities=12% Similarity=0.083 Sum_probs=48.2
Q ss_pred CchhHhhhcceEEEecCC--CcchHHHHHHHHHHHHhhcCccEEEEEeCC-cchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASD--KPQATDVLLRNHLVITHKRRIEYLVVVSDD-SDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsd--KPqAAD~ALkrhm~~m~~~gv~clvLVSDd-sdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+..+.. .-... ...+.+..+..++++.|++.+-+ +.+.++++.+++.++..|+++..
T Consensus 28 gi~~~a~~~g~~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 99 (289)
T 3brs_A 28 GAQMAAKEYEIKLEFMAPEKEEDYL--VQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSG 99 (289)
T ss_dssp HHHHHHHHHTCEEEECCCSSTTCHH--HHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSC
T ss_pred HHHHHHHHcCCEEEEecCCCCCCHH--HHHHHHHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEECCC
Confidence 667788888998887542 11211 22334446668899999998654 44568888888999999999764
No 31
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=91.27 E-value=1 Score=34.63 Aligned_cols=68 Identities=12% Similarity=0.004 Sum_probs=46.9
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-cCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-RCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++-|++.+-+.+ .+.+..+++ .++..|+++..
T Consensus 42 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 110 (296)
T 3brq_A 42 HAARMAEEKGRQLLLADGKHSAE--EERQAIQYLLDLRCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNRR 110 (296)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHH--HHHHHHHHHHHTTCSEEEEECSSSC-HHHHHHHHHTCSSCEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHhcCCCEEEEecCCCC-hHHHHHHHhcCCCCEEEEccc
Confidence 56677888899887654433322 2233444666889999999875543 367788888 89999999754
No 32
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=91.14 E-value=0.21 Score=39.20 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=53.3
Q ss_pred hhhcceEEEecCCCcchH--------HHHHHHHHHHHhhcCccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCc
Q 039912 40 LKRGGLWVRTASDKPQAT--------DVLLRNHLVITHKRRIEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDG 108 (198)
Q Consensus 40 LrRAGv~VrtVsdKPqAA--------D~ALkrhm~~m~~~gv~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~ 108 (198)
|.|.|+.+..+.|..... +..+++++.... ..=+++|++|-. .+..++++.|+++|.++|.|-+..+.
T Consensus 92 ~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s 170 (212)
T 2i2w_A 92 ENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVG-REGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGG 170 (212)
T ss_dssp TTSSSCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHC-CTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCG
T ss_pred ccCCCCeEEecCChHHhhHhhccCCHHHHHHHHHHhcC-CCCCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 456788888766433210 111233332222 244778888864 45677888899999999999997778
Q ss_pred cccchhccccc
Q 039912 109 ALKRISYACFS 119 (198)
Q Consensus 109 ~L~R~AD~~fs 119 (198)
.|.+.||+.+.
T Consensus 171 ~La~~aD~~l~ 181 (212)
T 2i2w_A 171 KMAGTADIEIR 181 (212)
T ss_dssp GGTTCSSEEEE
T ss_pred chHHhCCEEEE
Confidence 99999998875
No 33
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=91.10 E-value=0.56 Score=37.06 Aligned_cols=68 Identities=12% Similarity=0.131 Sum_probs=49.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.||+++-+.+ .+.++.+++.++..|+|+..
T Consensus 48 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 48 GINQACNVRGYSTRMTVSENSGD--LYHEVKTMIQSKSVDGFILLYSLKD-DPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHHHHHHHTCEEEECCCSSHHH--HHHHHHHHHHTTCCSEEEESSCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEeCCcCC-cHHHHHHHHcCCCEEEECCC
Confidence 77888999999998765443322 1233344677899999999864433 37888899999999999875
No 34
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=91.06 E-value=0.84 Score=37.19 Aligned_cols=69 Identities=16% Similarity=0.122 Sum_probs=50.1
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+..++++-||+.+.+.. .+.++.+++.++..|+|++..
T Consensus 91 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 159 (355)
T 3e3m_A 91 SLTDVLEQGGLQLLLGYTAYSPE--REEQLVETMLRRRPEAMVLSYDGHT-EQTIRLLQRASIPIVEIWEKP 159 (355)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTCCSEEEEECSCCC-HHHHHHHHHCCSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEECCcc
Confidence 78889999999987654322222 2234445667899999999876544 367888899999999998753
No 35
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=91.05 E-value=0.64 Score=36.67 Aligned_cols=70 Identities=10% Similarity=0.164 Sum_probs=49.2
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|+..++++.|+.+.......... ...+.+..+.+++++.||+++-+.. .++++.+++.++..|+|+...
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 101 (295)
T 3hcw_A 32 LGISETCNQHGYGTQTTVSNNMND--LMDEVYKMIKQRMVDAFILLYSKEN-DPIKQMLIDESMPFIVIGKPT 101 (295)
T ss_dssp HHHHHHHHTTTCEEEECCCCSHHH--HHHHHHHHHHTTCCSEEEESCCCTT-CHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEcCCCChH--HHHHHHHHHHhCCcCEEEEcCcccC-hHHHHHHHhCCCCEEEECCCC
Confidence 366788899999987655433222 2233444677899999999864432 367888889999999998653
No 36
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=91.00 E-value=0.33 Score=36.48 Aligned_cols=91 Identities=10% Similarity=0.062 Sum_probs=62.5
Q ss_pred hhHHHHHHHHhccCCCC----CCC--------chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc
Q 039912 16 KMEKYKRAARAVLTPEV----GNG--------LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS 83 (198)
Q Consensus 16 K~~KY~~AAr~lltPkv----gyG--------La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds 83 (198)
..+..++++..+...+. |.| ++..|.+.|..|..+++- . ...+ ..=+++|++|-.-
T Consensus 26 ~~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~-~---------~~~~--~~~d~vi~iS~sG 93 (180)
T 1jeo_A 26 WKNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGET-T---------TPSY--EKDDLLILISGSG 93 (180)
T ss_dssp HHHHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTST-T---------CCCC--CTTCEEEEEESSS
T ss_pred CHHHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCC-c---------cccC--CCCCEEEEEeCCC
Confidence 34566777776655443 555 234567889999887652 1 1112 2346788888654
Q ss_pred ---chHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 84 ---DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 84 ---dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+...+++.|+++|.++|.|-+..+. |.+.||..+.
T Consensus 94 ~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~ 131 (180)
T 1jeo_A 94 RTESVLTVAKKAKNINNNIIAIVCECGN-VVEFADLTIP 131 (180)
T ss_dssp CCHHHHHHHHHHHTTCSCEEEEESSCCG-GGGGCSEEEE
T ss_pred CcHHHHHHHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEE
Confidence 4566778899999999999997767 9999998764
No 37
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=90.94 E-value=0.84 Score=36.16 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=48.1
Q ss_pred CchhHhhhcceEEEecC-CCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTAS-DKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVs-dKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.... +..... ...+.+..++.++++.||+.+-++ .+.+.++.+++.++..|+++..
T Consensus 21 gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (313)
T 2h3h_A 21 GVKAAGKALGVDTKFFVPQKEDIN--AQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTD 91 (313)
T ss_dssp HHHHHHHHHTCEEEEECCSSSCHH--HHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHcCCEEEEECCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeCCC
Confidence 55667778898887643 222221 223345566688999999986544 4678899999999999999764
No 38
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=90.87 E-value=0.33 Score=37.83 Aligned_cols=69 Identities=17% Similarity=0.158 Sum_probs=50.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.||+.+-+. ..++++.+++.++..|+++...
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~~~~~~iPvV~~~~~~ 97 (291)
T 3egc_A 29 GVESEARHKGYSVLLANTAEDIV--REREAVGQFFERRVDGLILAPSEG-EHDYLRTELPKTFPIVAVNREL 97 (291)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCCSS-CCHHHHHSSCTTSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHhhccCCCEEEEeccc
Confidence 66778889999888655433222 123344466689999999988766 6688888999999999998754
No 39
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=90.83 E-value=0.71 Score=37.33 Aligned_cols=69 Identities=10% Similarity=-0.024 Sum_probs=49.0
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.||+++-+.+ .+.++.+++.++..|+|++..
T Consensus 89 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~l~~~~vdGiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 157 (344)
T 3kjx_A 89 GINQVLEDTELQPVVGVTDYLPE--KEEKVLYEMLSWRPSGVIIAGLEHS-EAARAMLDAAGIPVVEIMDSD 157 (344)
T ss_dssp HHHHHHTSSSSEEEEEECTTCHH--HHHHHHHHHHTTCCSEEEEECSCCC-HHHHHHHHHCSSCEEEEEECS
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEECCCCC-HHHHHHHHhCCCCEEEEeCCC
Confidence 77888999999887543322222 2234445666899999999875443 267888899999999998753
No 40
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=90.18 E-value=0.28 Score=36.82 Aligned_cols=94 Identities=9% Similarity=0.142 Sum_probs=62.9
Q ss_pred HHHHHHHhccCCC--C---CCC--------chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc--
Q 039912 19 KYKRAARAVLTPE--V---GNG--------LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-- 83 (198)
Q Consensus 19 KY~~AAr~lltPk--v---gyG--------La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-- 83 (198)
..++++..+...+ + |.| ++..|.+.|..+..+.+- . .+...+..+ ..=+++|++|-.-
T Consensus 37 ~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~-~----~~~~~~~~~--~~~d~vI~iS~sG~t 109 (183)
T 2xhz_A 37 NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVHPG-E----AAHGDLGMV--TPQDVVIAISNSGES 109 (183)
T ss_dssp HHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHHHTTTCCEEECCTT-H----HHHHTSTTC--CTTCEEEEECSSSCC
T ss_pred HHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHHHhcCceEEEeCch-H----HhhhhhccC--CCCCEEEEEeCCCCC
Confidence 6777777776644 3 554 345677889998887641 1 111111111 2346788888643
Q ss_pred -chHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 84 -DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 84 -dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+..++++.|+++|.++|.|-+..+..|.+.||..+.
T Consensus 110 ~~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~ 146 (183)
T 2xhz_A 110 SEITALIPVLKRLHVPLICITGRPESSMARAADVHLC 146 (183)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEE
Confidence 456677888999999999999777899999998764
No 41
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=90.12 E-value=0.9 Score=36.67 Aligned_cols=69 Identities=13% Similarity=0.032 Sum_probs=49.2
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+..++++.||+.+-+..- +++..+++.++..|++++..
T Consensus 83 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~ 151 (339)
T 3h5o_A 83 GIETVLDAAGYQMLIGNSHYDAG--QELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDLA 151 (339)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeecC
Confidence 67888999999987654333222 22344456678999999998754332 67888889999999997643
No 42
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=90.08 E-value=0.46 Score=37.19 Aligned_cols=70 Identities=11% Similarity=0.025 Sum_probs=47.5
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+.+.......... ...+.+..+..++++.|++++-+..-.++++.+++.++..|+++..
T Consensus 40 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 109 (293)
T 2iks_A 40 NYLERQARQRGYQLLIACSEDQPD--NEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRA 109 (293)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEcCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHhCCCCEEEECCc
Confidence 366778888999887644322221 2233445666889999999875543245778888899999999764
No 43
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=89.94 E-value=0.35 Score=38.20 Aligned_cols=49 Identities=16% Similarity=0.225 Sum_probs=40.5
Q ss_pred cCccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchh---ccccc
Q 039912 71 RRIEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRIS---YACFS 119 (198)
Q Consensus 71 ~gv~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~A---D~~fs 119 (198)
..=|+++.+|-. .+...+++.|+++|+++|.|-+..++.|.+.| |+.+.
T Consensus 113 ~~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~ 167 (201)
T 3trj_A 113 NEDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELR 167 (201)
T ss_dssp CTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEE
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEE
Confidence 345788888864 56778889999999999999887778999999 98764
No 44
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=89.68 E-value=1.3 Score=33.55 Aligned_cols=48 Identities=19% Similarity=0.227 Sum_probs=38.8
Q ss_pred CccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccch---hccccc
Q 039912 72 RIEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRI---SYACFS 119 (198)
Q Consensus 72 gv~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~---AD~~fs 119 (198)
.=+++|++|-. .+...+++.|+++|++||.|-+.....|++. ||+.+.
T Consensus 109 ~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~ 162 (196)
T 2yva_A 109 AGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIR 162 (196)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEE
Confidence 34677888764 4566788889999999999999777889999 998775
No 45
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=89.61 E-value=0.4 Score=37.11 Aligned_cols=70 Identities=4% Similarity=-0.094 Sum_probs=49.5
Q ss_pred CchhHhhhc-ceEEEecC---CCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRG-GLWVRTAS---DKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRA-Gv~VrtVs---dKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++. |+.+.+.. +..... ...+.+..+..++++-||+.+-++ .+.++++.+++.++..|+|+...
T Consensus 30 gi~~~a~~~~g~~~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 104 (304)
T 3gbv_A 30 GIREAVTTYSDFNISANITHYDPYDYN--SFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQI 104 (304)
T ss_dssp HHHHHHHHTGGGCEEEEEEEECSSCHH--HHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSCC
T ss_pred HHHHHHHHHHhCCeEEEEEcCCCCCHH--HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 566777777 77776532 111221 233445567789999999998766 47889999999999999998643
No 46
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=89.57 E-value=0.71 Score=35.56 Aligned_cols=84 Identities=11% Similarity=0.038 Sum_probs=51.8
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHH-HHHhcCCcEEEEccCCCccccc
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLL-EANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr-~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
.|+..++++.|+.+.......... ...+.+..+.+++++.||+.+-+ .+.++ .+++.++..|+|+.... ...
T Consensus 28 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~~dgiIi~~~~---~~~~~~~l~~~~iPvV~~~~~~~-~~~- 100 (277)
T 3e61_A 28 RGVEDVALAHGYQVLIGNSDNDIK--KAQGYLATFVSHNCTGMISTAFN---ENIIENTLTDHHIPFVFIDRINN-EHN- 100 (277)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECGGG---HHHHHHHHHHC-CCEEEGGGCC------
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEecCC---hHHHHHHHHcCCCCEEEEeccCC-CCC-
Confidence 366788889999887655444332 12334446678999999998833 56688 88899999999987542 111
Q ss_pred hhcccccHHHHhhchh
Q 039912 113 ISYACFSWWDILMGKA 128 (198)
Q Consensus 113 ~AD~~fsW~eV~~Gka 128 (198)
++.-+....|+.
T Consensus 101 ----~V~~D~~~~g~~ 112 (277)
T 3e61_A 101 ----GISTNHFKGGQL 112 (277)
T ss_dssp ---------HHHHHHH
T ss_pred ----eEEechHHHHHH
Confidence 555555555554
No 47
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=89.39 E-value=0.33 Score=37.11 Aligned_cols=48 Identities=13% Similarity=0.217 Sum_probs=39.1
Q ss_pred CccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccch---hccccc
Q 039912 72 RIEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRI---SYACFS 119 (198)
Q Consensus 72 gv~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~---AD~~fs 119 (198)
.=|+++++|-. .+...+++.|+++|++||.|-+..+..|.+. ||+.|.
T Consensus 113 ~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~ 166 (199)
T 1x92_A 113 PGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIR 166 (199)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEE
Confidence 34677888764 4567788899999999999999877899999 998764
No 48
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=89.28 E-value=0.61 Score=37.40 Aligned_cols=71 Identities=11% Similarity=-0.056 Sum_probs=48.5
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcC--ccEEEEEeCCcc-hHHHHHHHHhcCCcEEEEccCC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRR--IEYLVVVSDDSD-FVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~g--v~clvLVSDdsd-F~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|+..++++.|+.+.......... ...+.+..+.+++ ++-||+.+-+.+ +.++++.+++.++..|+++...
T Consensus 25 ~gi~~~a~~~g~~l~~~~~~~~~~--~~~~~i~~l~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 98 (332)
T 2rjo_A 25 KGAQSFAKSVGLPYVPLTTEGSSE--KGIADIRALLQKTGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIWNKP 98 (332)
T ss_dssp HHHHHHHHHHTCCEEEEECTTCHH--HHHHHHHHHHHHTTTCEEEEECCSSHHHHHHHHHHHHHHTCEEEEESCCC
T ss_pred HHHHHHHHHcCCEEEEecCCCCHH--HHHHHHHHHHHCCCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 356677788888887654322221 1233344666778 999999876554 4578899999999999998643
No 49
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=89.27 E-value=0.46 Score=35.81 Aligned_cols=91 Identities=10% Similarity=0.065 Sum_probs=62.8
Q ss_pred hHHHHHHHHhccCCCC----CCC--------chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-
Q 039912 17 MEKYKRAARAVLTPEV----GNG--------LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS- 83 (198)
Q Consensus 17 ~~KY~~AAr~lltPkv----gyG--------La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds- 83 (198)
.+..++++..+...+. |.| ++..|.+.|+.+..+++- |...+ ..=+++|++|-.-
T Consensus 24 ~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~----------~~~~~--~~~d~vI~iS~sG~ 91 (186)
T 1m3s_A 24 NEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEI----------LTPPL--AEGDLVIIGSGSGE 91 (186)
T ss_dssp HHHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTST----------TCCCC--CTTCEEEEECSSSC
T ss_pred HHHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcc----------cccCC--CCCCEEEEEcCCCC
Confidence 4566777776655443 555 234567899999887653 11112 2336777787654
Q ss_pred --chHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 84 --DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 84 --dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+...+++.|+++|.++|.|-+.....|.+.||..+.
T Consensus 92 t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~ 129 (186)
T 1m3s_A 92 TKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIR 129 (186)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEE
Confidence 455678889999999999999766889999998763
No 50
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=89.26 E-value=0.93 Score=35.86 Aligned_cols=69 Identities=7% Similarity=-0.048 Sum_probs=48.5
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.||+.+-+..-.+.+..+.+ ++..|+|+...
T Consensus 36 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~ 104 (303)
T 3kke_A 36 GVQMAASGHSTDVLLGQIDAPPR--GTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRV 104 (303)
T ss_dssp HHHHHHHHTTCCEEEEECCSTTH--HHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcC
Confidence 67788899999887654433332 12334446778999999998765553227777888 99999998654
No 51
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=89.15 E-value=1.3 Score=34.43 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=47.2
Q ss_pred CchhHhhhcceEEEecC-CCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTAS-DKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVs-dKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+..+. ...... ...+.+..+..++++-|++.+-++ ...++++.+++.++..|.++..
T Consensus 25 g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~~~~ 95 (303)
T 3d02_A 25 GVVQAGKEFNLNASQVGPSSTDAP--QQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP 95 (303)
T ss_dssp HHHHHHHHTTEEEEEECCSSSCHH--HHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred HHHHHHHHcCCEEEEECCCCCCHH--HHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 56677788898886433 222221 223345566688999999987654 3557889999999999999754
No 52
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=88.93 E-value=1.2 Score=35.76 Aligned_cols=68 Identities=13% Similarity=0.060 Sum_probs=47.0
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++.|++.+-+.+ .+.++.+++.++..|+++..
T Consensus 84 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 151 (332)
T 2o20_A 84 GVDDIASMYKYNMILANSDNDVE--KEEKVLETFLSKQVDGIVYMGSSLD-EKIRTSLKNSRTPVVLVGTI 151 (332)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECSSCCC-HHHHHHHHHHCCCEEEESCC
T ss_pred HHHHHHHHcCCEEEEEECCCChH--HHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 67778889999887654333222 2233444666889999999874333 35677777889999999864
No 53
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=88.89 E-value=0.7 Score=36.17 Aligned_cols=66 Identities=9% Similarity=-0.038 Sum_probs=45.4
Q ss_pred CchhHhhhcceEEEecCC--CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASD--KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsd--KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+..... .|+.. .+.+..+.+++++.||+.+-+.+ .+.++.+++.++..|+++..
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~~~----~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 96 (287)
T 3bbl_A 29 SMVREAGAVNYFVLPFPFSEDRSQI----DIYRDLIRSGNVDGFVLSSINYN-DPRVQFLLKQKFPFVAFGRS 96 (287)
T ss_dssp HHHHHHHHTTCEEEECCCCSSTTCC----HHHHHHHHTTCCSEEEECSCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHcCCEEEEEeCCCchHHH----HHHHHHHHcCCCCEEEEeecCCC-cHHHHHHHhcCCCEEEECCc
Confidence 566778888988876432 22222 22334556889999999875433 26788888899999999764
No 54
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=88.78 E-value=0.36 Score=37.63 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=63.7
Q ss_pred hHHHHHHHHhccCCCC----CCC--------chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC--
Q 039912 17 MEKYKRAARAVLTPEV----GNG--------LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD-- 82 (198)
Q Consensus 17 ~~KY~~AAr~lltPkv----gyG--------La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd-- 82 (198)
.+..++++..+...+. |.| ++..|.+.|..|..+++- .+ ..+ ..=+++|++|-.
T Consensus 34 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~-~~---------~~~--~~~DvvI~iS~SG~ 101 (200)
T 1vim_A 34 LETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGET-VT---------PRI--TDQDVLVGISGSGE 101 (200)
T ss_dssp HHHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTST-TC---------CCC--CTTCEEEEECSSSC
T ss_pred HHHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCc-cc---------cCC--CCCCEEEEEeCCCC
Confidence 4556667766654442 554 334677889999887652 11 011 234778888864
Q ss_pred -cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 83 -SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 83 -sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
.+...+++.|+++|+++|.|-+.....|.+.||+.|.
T Consensus 102 t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~ 139 (200)
T 1vim_A 102 TTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMV 139 (200)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEE
T ss_pred cHHHHHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEE
Confidence 4566778889999999999999777899999998875
No 55
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=88.51 E-value=0.57 Score=36.37 Aligned_cols=68 Identities=10% Similarity=0.133 Sum_probs=48.1
Q ss_pred CchhHhhhcceEEEecCCCc--chHHHHHHHHHHHHhhcCccEEEEEeCCc-chHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKP--QATDVLLRNHLVITHKRRIEYLVVVSDDS-DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKP--qAAD~ALkrhm~~m~~~gv~clvLVSDds-dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.+..... ... .-.+.+..+..++++-||+.+-++ .+.+.++.++ .++..|+++..
T Consensus 26 g~~~~a~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~~~~ 96 (304)
T 3o1i_D 26 GMVSEAEKQGVNLRVLEAGGYPNKS--RQEQQLALCTQWGANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQ 96 (304)
T ss_dssp HHHHHHHHHTCEEEEEECSSTTCHH--HHHHHHHHHHHHTCSEEEECCSSTTSSTTTHHHHT-TTSCEEECSSC
T ss_pred HHHHHHHHcCCeEEEEcCCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHc-CCCCEEEecCC
Confidence 56677888899887655443 222 223445566688999999886554 3567788899 99999999654
No 56
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=88.49 E-value=0.89 Score=35.70 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=46.5
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... -.+.+..+..++++.||+.+-+.+- +.++.+.+ ++..|+|+...
T Consensus 32 gi~~~a~~~g~~~~~~~~~~~~~---~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~-~iPvV~i~~~~ 98 (289)
T 3k9c_A 32 QIYAAATRRGYDVMLSAVAPSRA---EKVAVQALMRERCEAAILLGTRFDT-DELGALAD-RVPALVVARAS 98 (289)
T ss_dssp HHHHHHHHTTCEEEEEEEBTTBC---HHHHHHHHTTTTEEEEEEETCCCCH-HHHHHHHT-TSCEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH---HHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHc-CCCEEEEcCCC
Confidence 56778888998886543222211 2344456678999999999765543 67777776 99999998643
No 57
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=88.46 E-value=0.25 Score=37.97 Aligned_cols=98 Identities=10% Similarity=0.159 Sum_probs=65.9
Q ss_pred hhHHHHHHHHhccCCC--C---CCCc--------hhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC
Q 039912 16 KMEKYKRAARAVLTPE--V---GNGL--------IGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD 82 (198)
Q Consensus 16 K~~KY~~AAr~lltPk--v---gyGL--------a~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd 82 (198)
..+..++++..+...+ + |.|- +..|.|-|..+..+++ .+ .+...+..+ . .=+++|++|-.
T Consensus 30 ~~~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~----~~-~~~~~~~~~-~-~~dvvI~iS~s 102 (201)
T 3fxa_A 30 SEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTP----SD-AVHGTLGVL-Q-KEDILILISKG 102 (201)
T ss_dssp CHHHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHHHHTTCCEEECCH----HH-HTTTGGGGC-C-TTCEEEEECSS
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCc----hH-HHhhhhhcC-C-CCCEEEEEeCC
Confidence 3467778888777764 2 6663 3357788999888653 11 111111112 2 23678888865
Q ss_pred c---chHHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 83 S---DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 83 s---dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
- +...+++.|+++|+++|.|-+.....|.+.||..+.-
T Consensus 103 G~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 143 (201)
T 3fxa_A 103 GNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPV 143 (201)
T ss_dssp SCCHHHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred CCCHHHHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEc
Confidence 4 4556678999999999999997778999999988743
No 58
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=88.22 E-value=1.1 Score=34.93 Aligned_cols=67 Identities=10% Similarity=0.161 Sum_probs=44.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++.|++.+-+.+ .+.++.++ .++..|+++..
T Consensus 29 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~-~~iPvV~~~~~ 95 (285)
T 3c3k_A 29 GIEKTAEKNGYRILLCNTESDLA--RSRSCLTLLSGKMVDGVITMDALSE-LPELQNII-GAFPWVQCAEY 95 (285)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHTHHHHTTCCSEEEECCCGGG-HHHHHHHH-TTSSEEEESSC
T ss_pred HHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHh-cCCCEEEEccc
Confidence 56677888898887654322221 2233445666899999999864433 35677777 99999999764
No 59
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=88.09 E-value=1.2 Score=35.70 Aligned_cols=69 Identities=12% Similarity=0.180 Sum_probs=45.9
Q ss_pred CchhHhhhc-ceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc-hHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRG-GLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD-FVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRA-Gv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd-F~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++. |+.+.......... ...+.+..+..++++.|++.+-+.+ +.+.++.+++.++..|+++..
T Consensus 26 gi~~~a~~~~g~~l~i~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 26 EILREAMFYNGVSVEIRSAGDDNS--KQAEDVHYFMDEGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp HHHHHHTTSSSCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHcCCcEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 555666677 88776543222221 1223344666889999999876543 467888888999999999764
No 60
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=87.75 E-value=1.1 Score=36.68 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=46.4
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++.|++.+-+.+ .+.++.+++.++..|+|+..
T Consensus 87 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 154 (348)
T 3bil_A 87 EIQSTASKAGLATIITNSNEDAT--TMSGSLEFLTSHGVDGIICVPNEEC-ANQLEDLQKQGMPVVLVDRE 154 (348)
T ss_dssp HHHHHHHHTTCCEEEEECTTCHH--HHHHHHHHHHHTTCSCEEECCCGGG-HHHHHHHHHC-CCEEEESSC
T ss_pred HHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEccc
Confidence 66778889999887644322221 2233444666889999999875543 46788888899999999764
No 61
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=87.61 E-value=0.79 Score=36.11 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=46.4
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ....+..+..++++.||+++-+.+- +.++.+++.++..|+|+..
T Consensus 31 gi~~~a~~~g~~~~~~~~~~~~~---~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~ 97 (294)
T 3qk7_A 31 WIGIELGKRGLDLLLIPDEPGEK---YQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRS 97 (294)
T ss_dssp HHHHHHHHTTCEEEEEEECTTCC---CHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCChhh---HHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCC
Confidence 56778888898887543322111 1222335557899999998765433 7888999999999999874
No 62
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=87.50 E-value=0.53 Score=36.77 Aligned_cols=70 Identities=11% Similarity=0.057 Sum_probs=40.3
Q ss_pred CCchhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 34 NGLIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|+..++++.|+.+... ....... ...+.+..+..++++.|++.+-+.+ .+.++.+++.++..|+++...
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~~ 98 (290)
T 3clk_A 28 DGIQEEAHKNGYNLIIVYSGSADPE--EQKHALLTAIERPVMGILLLSIALT-DDNLQLLQSSDVPYCFLSMGF 98 (290)
T ss_dssp HHHHHHHHTTTCEEEEEC------------CHHHHHHSSCCSEEEEESCC-----CHHHHHCC--CEEEESCC-
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCHH--HHHHHHHHHHhcCCCEEEEecccCC-HHHHHHHHhCCCCEEEEcCCC
Confidence 35667788889888765 3322211 1123344666889999999875433 256777888999999998643
No 63
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=86.99 E-value=2.7 Score=32.43 Aligned_cols=68 Identities=15% Similarity=0.091 Sum_probs=43.4
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-cCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-RCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+.+++++.|++.+-+.. ..++...++ .++..|+++..
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 96 (289)
T 1dbq_A 28 AVEKNCFQKGYTLILGNAWNNLE--KQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 96 (289)
T ss_dssp HHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEEECSCCC-HHHHHHHHHTTTSCEEEEECS
T ss_pred HHHHHHHHcCCeEEEEcCCCChH--HHHHHHHHHHhCCCCEEEEEeccCC-HHHHHHHHhccCCCEEEEccC
Confidence 56677788888887644332222 2334455666889999999875542 134444444 79999999864
No 64
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=86.95 E-value=1.6 Score=34.05 Aligned_cols=68 Identities=12% Similarity=0.095 Sum_probs=46.8
Q ss_pred CchhHhhhcceEEEecCCCcchHH-HHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATD-VLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD-~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+........... ..+.+ .+.+++++.||+++-+.. .+.++.+++.++..|+|+...
T Consensus 31 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~---~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 99 (288)
T 3gv0_A 31 GITEVLSTTQYHLVVTPHIHAKDSMVPIRY---ILETGSADGVIISKIEPN-DPRVRFMTERNMPFVTHGRSD 99 (288)
T ss_dssp HHHHHHTTSSCEEEECCBSSGGGTTHHHHH---HHHHTCCSEEEEESCCTT-CHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHcCCEEEEecCCcchhHHHHHHH---HHHcCCccEEEEecCCCC-cHHHHHHhhCCCCEEEECCcC
Confidence 677888999998886543322211 12222 455789999998864432 377888999999999998753
No 65
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=86.74 E-value=0.6 Score=37.17 Aligned_cols=95 Identities=20% Similarity=0.254 Sum_probs=65.8
Q ss_pred hHHHHHHHHhccC------CCC---CCC--------chhHhhhcceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEE
Q 039912 17 MEKYKRAARAVLT------PEV---GNG--------LIGELKRGGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVV 78 (198)
Q Consensus 17 ~~KY~~AAr~llt------Pkv---gyG--------La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvL 78 (198)
.+..++++..+.. .++ |.| ++..|.+.|+.+..+.+.-.. |+. .... .=+++|+
T Consensus 41 ~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~-------~~~~~~~~-~~DlvI~ 112 (220)
T 3etn_A 41 TDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQ-------HGDLGILQ-ENDLLLL 112 (220)
T ss_dssp CTHHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGG-------BTGGGGCC-TTCEEEE
T ss_pred HHHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHH-------HhhhccCC-CCCEEEE
Confidence 4567777777665 333 666 455688999999987653110 111 1112 2367888
Q ss_pred EeCC---cchHHHHHHHHh--cCCcEEEEccCCCccccchhccccc
Q 039912 79 VSDD---SDFVEVLLEANL--RCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 79 VSDd---sdF~~~Lr~Ar~--r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+|-. .+...+++.|++ +|+++|.|-+..+..|.+.||+.+.
T Consensus 113 iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~ 158 (220)
T 3etn_A 113 ISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLS 158 (220)
T ss_dssp ECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEE
T ss_pred EcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEE
Confidence 8764 456677889999 9999999999777899999999876
No 66
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=86.41 E-value=0.88 Score=36.83 Aligned_cols=65 Identities=25% Similarity=0.316 Sum_probs=45.4
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEe-CCcc-hHHHHHHHHhcCCcEEEEccCC
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVS-DDSD-FVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVS-Ddsd-F~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|.-..||-|+||+||..-- --++.|+ .+ -..+.+|+|. ||.+ ..+++..|++||+...||=+.-
T Consensus 46 eefekqgvdvrtvedkedfr--enireiwery--pqldvvvivttddkewikdfieeakergvevfvvynnk 113 (162)
T 2l82_A 46 EEFEKQGVDVRTVEDKEDFR--ENIREIWERY--PQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNK 113 (162)
T ss_dssp HHHHTTTCEEEECCSHHHHH--HHHHHHHHHC--TTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHcCCceeeeccHHHHH--HHHHHHHHhC--CCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecCC
Confidence 35667899999999987644 2345555 33 2456666654 4444 4689999999999988886643
No 67
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=85.72 E-value=1.4 Score=35.38 Aligned_cols=68 Identities=10% Similarity=0.042 Sum_probs=47.6
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++.|++.+-+.+ .+.++.+++.++..|+++..
T Consensus 81 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 148 (332)
T 2hsg_A 81 GIEDIATMYKYNIILSNSDQNQD--KELHLLNNMLGKQVDGIIFMSGNVT-EEHVEELKKSPVPVVLAASI 148 (332)
T ss_dssp HHHHHHHHHTCEEEEEECCSHHH--HHHHHHHHTSCCSSCCEEECCSSCC-HHHHHHHTTSSSCEEEESCC
T ss_pred HHHHHHHHcCCEEEEEeCCCChH--HHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 66778889999887654322221 2233455677899999999875443 36788888899999999764
No 68
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=84.35 E-value=1.2 Score=34.34 Aligned_cols=72 Identities=19% Similarity=0.106 Sum_probs=44.1
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC---cEEEEccCC-Cccccch
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL---KTVVVGDIN-DGALKRI 113 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l---~TVVVGd~~-~~~L~R~ 113 (198)
.+|++.|+.+-.+|.+ ..+...+++ + ..|++ + .....+.-..+.+.+++.|+ .+++|||+. |-...+.
T Consensus 46 ~~Lk~~Gi~~~I~Tg~-~~~~~~l~~----l-~lgi~-~-~~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ 117 (168)
T 3ewi_A 46 SLLKKSGIEVRLISER-ACSKQTLSA----L-KLDCK-T-EVSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKR 117 (168)
T ss_dssp HHHHHTTCEEEEECSS-CCCHHHHHT----T-CCCCC-E-ECSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHH
T ss_pred HHHHHCCCEEEEEeCc-HHHHHHHHH----h-CCCcE-E-EECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHH
Confidence 6899999999999999 544333332 1 45787 3 33333444444555555665 699999953 3334444
Q ss_pred hccc
Q 039912 114 SYAC 117 (198)
Q Consensus 114 AD~~ 117 (198)
|.+.
T Consensus 118 ag~~ 121 (168)
T 3ewi_A 118 VGLS 121 (168)
T ss_dssp SSEE
T ss_pred CCCE
Confidence 4444
No 69
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=84.32 E-value=1.9 Score=32.36 Aligned_cols=76 Identities=17% Similarity=0.073 Sum_probs=47.3
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHH-HHhcC---CcEEEEccC-CCccc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLE-ANLRC---LKTVVVGDI-NDGAL 110 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~-Ar~r~---l~TVVVGd~-~~~~L 110 (198)
+-.+|+++|+.+-.+|.+|... ++. .+...|++ +.-+. ..=..+++. +++.| -.+++|||+ +|-..
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~---~~~---~~~~lgi~--~~~~~-~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~ 117 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPV---VAA---RARKLKIP--VLHGI-DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPC 117 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHH---HHH---HHHHHTCC--EEESC-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCeEEEEECcChHH---HHH---HHHHcCCe--eEeCC-CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHH
Confidence 4678999999999999888743 222 12245788 33333 334444444 44455 469999995 44555
Q ss_pred cchhcccccH
Q 039912 111 KRISYACFSW 120 (198)
Q Consensus 111 ~R~AD~~fsW 120 (198)
.+.|++.+-+
T Consensus 118 ~~~ag~~v~~ 127 (176)
T 3mmz_A 118 FALVGWPVAV 127 (176)
T ss_dssp HHHSSEEEEC
T ss_pred HHHCCCeEEC
Confidence 6667766543
No 70
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=83.88 E-value=0.54 Score=36.08 Aligned_cols=70 Identities=17% Similarity=-0.063 Sum_probs=38.2
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|+..++++.|+.+........... ..+.+..+..++++.|++.+-+.+ .+.++.+++.++..|+++...
T Consensus 19 ~gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~~~~~~iPvV~~~~~~ 88 (276)
T 2h0a_A 19 EGIEGVLLEQRYDLALFPILSLARL--KRYLENTTLAYLTDGLILASYDLT-ERFEEGRLPTERPVVLVDAQN 88 (276)
T ss_dssp HHHHHHHGGGTCEEEECCCCSCCCC--C---------CCCSEEEEESCCCC-------CCSCSSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchhh--HHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHhhcCCCEEEEeccC
Confidence 3667788888988876543322110 112233555789999999875543 367778888899999997643
No 71
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=83.72 E-value=0.6 Score=36.49 Aligned_cols=63 Identities=8% Similarity=0.094 Sum_probs=44.5
Q ss_pred CchhHhhhcceE-EEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLW-VRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~-VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+. +.......... .-.+.+..+.+++++.||+.+ +.++.+++.++..|+++..
T Consensus 31 gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~------~~~~~~~~~~iPvV~~~~~ 94 (277)
T 3hs3_A 31 GIQEVIQKEGYTALISFSTNSDVK--KYQNAIINFENNNVDGIITSA------FTIPPNFHLNTPLVMYDSA 94 (277)
T ss_dssp HHHHHHHHTTCEEEEEECSSCCHH--HHHHHHHHHHHTTCSEEEEEC------CCCCTTCCCSSCEEEESCC
T ss_pred HHHHHHHHCCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEcc------hHHHHHHhCCCCEEEEccc
Confidence 677888999999 66544433332 123334466789999999998 3355667889999999865
No 72
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=83.43 E-value=1.1 Score=36.63 Aligned_cols=67 Identities=12% Similarity=0.020 Sum_probs=45.0
Q ss_pred chhHhhhcceEEE---ecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc---EEEEcc
Q 039912 36 LIGELKRGGLWVR---TASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK---TVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~---TVVVGd 104 (198)
+...|+++|+-|. .++..+...| ....+..+.+.+.+.|++.+++.....+++.+++.|++ ..++|.
T Consensus 160 ~~~~l~~~G~~v~~~~~~~~~~~~~d--~~~~~~~l~~~~pdaI~~~~~~~~a~~~~~~~~~~G~~~~~~~~~~~ 232 (385)
T 1pea_A 160 MRHLYRQHGGTVLEEIYIPLYPSDDD--LQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASL 232 (385)
T ss_dssp HHHHHHHTTCEEEEEEEECSSCCHHH--HHHHHHHHHHHTCSEEEEECCTHHHHHHHHHHHHHHCSSCCCCEEES
T ss_pred HHHHHHHcCCEEEEEEeecCCCCcch--HHHHHHHHHHCCCCEEEEecccccHHHHHHHHHHcCCCcCCceEEec
Confidence 4466778887653 2322223333 33445544456899999999888999999999999987 335554
No 73
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=83.41 E-value=0.63 Score=37.07 Aligned_cols=47 Identities=13% Similarity=0.202 Sum_probs=37.2
Q ss_pred ccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCC-----------Cccccchhccccc
Q 039912 73 IEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDIN-----------DGALKRISYACFS 119 (198)
Q Consensus 73 v~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~-----------~~~L~R~AD~~fs 119 (198)
=|++|++|-. .+..++++.||++|+++|.|-+.. ++.|.+.||+.|.
T Consensus 109 ~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 109 KDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp TCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 3778888864 456778889999999999998862 2379999999874
No 74
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=83.37 E-value=2 Score=34.80 Aligned_cols=67 Identities=10% Similarity=-0.009 Sum_probs=43.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHH-HHHHHh-cCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEV-LLEANL-RCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~-Lr~Ar~-r~l~TVVVGd~ 105 (198)
|+...++..|+.+..++..+..++ ..+.+..+.+++++-|+++|- .+.+. .+.|++ .++..|+|+..
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~~--~~~~l~~l~~~~vdgIi~~~~--~~~~~~~~~~~~~p~~p~v~id~~ 96 (296)
T 2hqb_A 28 GLLNIHSNLDVDVVLEEGVNSEQK--AHRRIKELVDGGVNLIFGHGH--AFAEYFSTIHNQYPDVHFVSFNGE 96 (296)
T ss_dssp HHHHHHHHSCCEEEEECCCCSHHH--HHHHHHHHHHTTCCEEEECST--HHHHHHHTTTTSCTTSEEEEESCC
T ss_pred HHHHHHHHhCCeEEEEeCCCCHHH--HHHHHHHHHHCCCCEEEEcCH--hHHHHHHHHHHHCCCCEEEEEecC
Confidence 566678888998887655444333 235566777899999999863 34443 333433 27888888753
No 75
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=82.81 E-value=1.6 Score=34.07 Aligned_cols=61 Identities=10% Similarity=0.003 Sum_probs=42.9
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK 98 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~ 98 (198)
..|++.|+.+-.+.--+......+++.+......|+..|++.+....|..+.+.|++.|++
T Consensus 70 ~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~ 130 (262)
T 3p6l_A 70 ELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIK 130 (262)
T ss_dssp HHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCE
T ss_pred HHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCE
Confidence 4566778777644322223334677777766678888888888778888888888888874
No 76
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=82.58 E-value=1.1 Score=38.56 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=37.5
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+.+|.+|-. .+-..+++.|+++|.+||.|-+..++.|.+.||..+.
T Consensus 109 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 157 (375)
T 2zj3_A 109 DVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVH 157 (375)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeee
Confidence 467777764 4566788899999999999999777899999998764
No 77
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=82.09 E-value=1.1 Score=37.79 Aligned_cols=49 Identities=12% Similarity=0.065 Sum_probs=40.7
Q ss_pred CccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 72 RIEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 72 gv~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
.=|++|.+|-. .+..++++.|+++|.+||.|-+.....|.+.||+.+.-
T Consensus 140 ~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~ 191 (306)
T 1nri_A 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIET 191 (306)
T ss_dssp TTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEc
Confidence 34778888864 45678899999999999999998778999999988754
No 78
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=82.01 E-value=4.4 Score=33.19 Aligned_cols=66 Identities=12% Similarity=0.120 Sum_probs=43.5
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHH-HHHHHHh-cCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVE-VLLEANL-RCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~-~Lr~Ar~-r~l~TVVVGd~ 105 (198)
|+...++..|+.+..++...+ ++. .+.+..+.++|++-||+++-. +.+ +...|++ .++..|+|+..
T Consensus 28 Gi~~~~~~~g~~~~~~~~~~~-~~~--~~~l~~l~~~~~dgIi~~~~~--~~~~~~~~a~~~p~~p~v~id~~ 95 (318)
T 2fqx_A 28 GISRFAQENNAKCKYVTASTD-AEY--VPSLSAFADENMGLVVACGSF--LVEAVIETSARFPKQKFLVIDAV 95 (318)
T ss_dssp HHHHHHHHTTCEEEEEECCSG-GGH--HHHHHHHHHTTCSEEEEESTT--THHHHHHHHHHCTTSCEEEESSC
T ss_pred HHHHHHHHhCCeEEEEeCCCH-HHH--HHHHHHHHHcCCCEEEECChh--HHHHHHHHHHHCCCCEEEEEcCc
Confidence 556677788988876544333 332 355667778999999999732 333 4445555 38999999764
No 79
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=81.50 E-value=5 Score=27.91 Aligned_cols=57 Identities=12% Similarity=-0.000 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHhhcCccE---EEEEeCCcchHHHHHHHHhcCCcEEEEccCCCccccc
Q 039912 56 ATDVLLRNHLVITHKRRIEY---LVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 56 AAD~ALkrhm~~m~~~gv~c---lvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
.+...|.+....+...|+.+ -..+...+--..+++.|++.+..-||+|-...+.+.+
T Consensus 67 ~~~~~l~~~~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~~~~~~ 126 (147)
T 3hgm_A 67 YATEIAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQGTNGDKS 126 (147)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSCTTCCSC
T ss_pred HHHHHHHHHHHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCCccccc
Confidence 34445555555555678776 3333334557889999999999999999865444443
No 80
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=81.43 E-value=0.59 Score=36.74 Aligned_cols=68 Identities=15% Similarity=0.050 Sum_probs=47.2
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+.......... ...+.+..+..++++.||+++-+.+- .+..+++.++..|+|+...
T Consensus 35 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~~~~~iPvV~~~~~~ 102 (301)
T 3miz_A 35 GIQDWANANGKTILIANTGGSSE--REVEIWKMFQSHRIDGVLYVTMYRRI--VDPESGDVSIPTVMINCRP 102 (301)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEEEEEEEEE--CCCCCTTCCCCEEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEecCCccH--HHHHHHhCCCCEEEECCCC
Confidence 46788999999987654332222 22344446678999999998754332 6677888999999998643
No 81
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=81.38 E-value=4.4 Score=29.37 Aligned_cols=71 Identities=13% Similarity=0.072 Sum_probs=42.8
Q ss_pred chhHhhhcceEEEecCCCcch-----HHH---HHHHHHH-HHhhcC--ccEEEEE----eCCcch-----HHHHHHHHhc
Q 039912 36 LIGELKRGGLWVRTASDKPQA-----TDV---LLRNHLV-ITHKRR--IEYLVVV----SDDSDF-----VEVLLEANLR 95 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA-----AD~---ALkrhm~-~m~~~g--v~clvLV----SDdsdF-----~~~Lr~Ar~r 95 (198)
+-.+|++.|+.+-.+|..|.. ... .+..++. .+...| ++.++.. |++... .-+.+.+++.
T Consensus 35 ~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~ 114 (179)
T 3l8h_A 35 AIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRY 114 (179)
T ss_dssp HHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHc
Confidence 457889999999999998851 111 1223333 444667 7776543 454332 2244444555
Q ss_pred CC---cEEEEccCC
Q 039912 96 CL---KTVVVGDIN 106 (198)
Q Consensus 96 ~l---~TVVVGd~~ 106 (198)
|+ ++++|||+.
T Consensus 115 ~~~~~~~~~vGD~~ 128 (179)
T 3l8h_A 115 DVDLAGVPAVGDSL 128 (179)
T ss_dssp TCCCTTCEEEESSH
T ss_pred CCCHHHEEEECCCH
Confidence 66 599999963
No 82
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=81.22 E-value=1.1 Score=37.99 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=38.0
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+++|.+|-. .+-..+++.|+++|.++|.|-+..++.|.+.||..+.
T Consensus 102 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~ 150 (342)
T 1j5x_A 102 GLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLV 150 (342)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEE
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEE
Confidence 678888854 4667788899999999999998777899999997653
No 83
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=80.94 E-value=3.2 Score=32.38 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=45.9
Q ss_pred hhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC---cEEEEccCC-Cccccc
Q 039912 37 IGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL---KTVVVGDIN-DGALKR 112 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l---~TVVVGd~~-~~~L~R 112 (198)
-..|+++|+.+-.+|.+|... ++. .+...|++.++-.. .+.-..+.+.+++.|+ .+++|||+. |-...+
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~---~~~---~l~~lgi~~~~~~~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~ 133 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQI---VEN---RMKALGISLIYQGQ-DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVME 133 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHH---HHH---HHHHTTCCEEECSC-SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHHCCCEEEEEECcCHHH---HHH---HHHHcCCcEEeeCC-CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHH
Confidence 467899999999999988743 122 22246787654322 3334444555555665 699999953 333445
Q ss_pred hhcccc
Q 039912 113 ISYACF 118 (198)
Q Consensus 113 ~AD~~f 118 (198)
.|.+.+
T Consensus 134 ~ag~~v 139 (195)
T 3n07_A 134 KVALRV 139 (195)
T ss_dssp TSSEEE
T ss_pred HCCCEE
Confidence 555543
No 84
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=80.67 E-value=2 Score=36.86 Aligned_cols=47 Identities=15% Similarity=0.078 Sum_probs=38.6
Q ss_pred ccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 73 IEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 73 v~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
=+++|.+|-. .+-..+++.|+++|.+||.|-+..++.|.|.||..+.
T Consensus 83 ~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~ 132 (352)
T 3g68_A 83 NTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILT 132 (352)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECC
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEE
Confidence 4567777765 4566788899999999999998777899999998775
No 85
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=80.54 E-value=1.4 Score=37.41 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=60.9
Q ss_pred hhHHHHHHHHhccC--CC-C---CCCch--------hHhhh-cceEEEecCCCcchHHHHHHHHHHHHhh-cCccEEEEE
Q 039912 16 KMEKYKRAARAVLT--PE-V---GNGLI--------GELKR-GGLWVRTASDKPQATDVLLRNHLVITHK-RRIEYLVVV 79 (198)
Q Consensus 16 K~~KY~~AAr~llt--Pk-v---gyGLa--------~ELrR-AGv~VrtVsdKPqAAD~ALkrhm~~m~~-~gv~clvLV 79 (198)
..+..++++..+.. ++ + |.|-. .-|.| .|+.|.... +.+. .+.. ... ..=+.+|.+
T Consensus 38 ~~~~i~~~~~~i~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~----~~e~---~~~~-~~~l~~~dlvI~i 109 (355)
T 2a3n_A 38 ARQKAEQVADEIYQAGFSSLFFASVGGSLAPMMAINEFAKELTTLPVYVEQ----AAEL---IHKG-NKRLNKDSVVITL 109 (355)
T ss_dssp THHHHHHHHHHHHHHCCSCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEE----HHHH---HHHC-CTTCCTTCEEEEE
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEEccHHHHHHHHHHHHHHhhcCCeEEEcC----cHHH---Hhhc-hhcCCCCCEEEEE
Confidence 45666777776655 33 2 66522 23566 788777543 2221 1111 101 233567777
Q ss_pred eCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 80 SDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 80 SDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
|-. .+...+++.|+++|.+||.|-+..++.|.+.||..+.
T Consensus 110 S~SG~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~ 152 (355)
T 2a3n_A 110 SKSGDTKESVAIAEWCKAQGIRVVAITKNADSPLAQAATWHIP 152 (355)
T ss_dssp CSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEE
T ss_pred eCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEE
Confidence 754 4566778889999999999998777899999998763
No 86
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=80.41 E-value=1.7 Score=37.36 Aligned_cols=46 Identities=7% Similarity=0.138 Sum_probs=37.3
Q ss_pred cEEEEEeCC---cchHHHHHHHHhc-CCcEEEEccCCCccccchhccccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLR-CLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r-~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+.+|.+|-. .+...+++.|+++ |.++|.|-+..++.|.+.||..+.
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l~ 148 (373)
T 2aml_A 99 DLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLD 148 (373)
T ss_dssp CEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEEE
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCccee
Confidence 567777754 4566778889999 999999999777899999998763
No 87
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=79.88 E-value=1.6 Score=36.94 Aligned_cols=97 Identities=10% Similarity=-0.033 Sum_probs=61.6
Q ss_pred hhhHHHHHHHHhcc--CCCC----CCCc--------hhHhhhc--ceEEEecCCCcchHHHHHHHHHHHHhhc-CccEEE
Q 039912 15 IKMEKYKRAARAVL--TPEV----GNGL--------IGELKRG--GLWVRTASDKPQATDVLLRNHLVITHKR-RIEYLV 77 (198)
Q Consensus 15 ~K~~KY~~AAr~ll--tPkv----gyGL--------a~ELrRA--Gv~VrtVsdKPqAAD~ALkrhm~~m~~~-gv~clv 77 (198)
...+..++++..+. .++. |.|- +.-|.|- |+.|..+. +.+. .++. .... .=+++|
T Consensus 8 ~~~~~i~~~v~~i~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~----~~e~---~~~~-~~~l~~~dlvI 79 (329)
T 3eua_A 8 KVNREVQAFLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFDRESKSINSDLYS----ANEF---IQRN-PVQLGEKSLVI 79 (329)
T ss_dssp GSCHHHHHHHHHHTTCCCCEEEEEECTHHHHTTHHHHHHHHHHCSSCEEEEEE----HHHH---HHHC-CTTCSTTEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEccHHHHHHHHHHHHHHHhcCCCeEEEEc----cHHH---HhcC-ccCCCCCcEEE
Confidence 34556667777776 3332 5552 3345554 88887653 2221 1111 0011 235677
Q ss_pred EEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 78 VVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 78 LVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
.+|-. .+-..+++.|+++|.+||.|-+..++.|.|.||..|.
T Consensus 80 ~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 124 (329)
T 3eua_A 80 LCSHSGNTPETVKAAAFARGKGALTIAMTFKPESPLAQEAQYVAQ 124 (329)
T ss_dssp EEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEEE
T ss_pred EEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEE
Confidence 77765 4566788899999999999998777899999998863
No 88
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=79.85 E-value=5.8 Score=31.88 Aligned_cols=68 Identities=15% Similarity=0.091 Sum_probs=43.7
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-cCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-RCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++.|++.+-+.. ..++...++ .++..|+++..
T Consensus 79 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 147 (340)
T 1qpz_A 79 AVEKNCFQKGYTLILGNAWNNLE--KQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 147 (340)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHTTTTSCEEEEEES
T ss_pred HHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHhhCCCCEEEEecc
Confidence 67778889999887654332222 2334455666889999999865432 123333333 78999999764
No 89
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=79.79 E-value=1.6 Score=37.35 Aligned_cols=46 Identities=20% Similarity=0.094 Sum_probs=37.4
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+.+|.+|-. .+-..+++.||++|.+||.|-+..++.|.+.||..+.
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 147 (367)
T 2poc_A 99 DTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVH 147 (367)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEE
Confidence 457777754 4567788899999999999999777899999998764
No 90
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=79.62 E-value=2.2 Score=37.00 Aligned_cols=48 Identities=10% Similarity=0.058 Sum_probs=39.8
Q ss_pred CccEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 72 RIEYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 72 gv~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
.=+++|.+|-. .+-..+++.|+++|.+||.|-+..++.|.|.||..+.
T Consensus 97 ~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~ 147 (366)
T 3knz_A 97 GKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAADYILT 147 (366)
T ss_dssp CSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECC
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEe
Confidence 44667788864 4677788999999999999998777899999998874
No 91
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=78.90 E-value=8.1 Score=28.44 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHhhcCcc-EEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 56 ATDVLLRNHLVITHKRRIE-YLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 56 AAD~ALkrhm~~m~~~gv~-clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.+...|.+....+...|+. +-+.|-..+-...|++.|++.+..-||+|-..
T Consensus 78 ~~~~~l~~~~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g 129 (163)
T 1tq8_A 78 PIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVG 129 (163)
T ss_dssp THHHHHHHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCC
Confidence 4455666655555567877 53333333457789999999999999999864
No 92
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=78.53 E-value=2.5 Score=36.15 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=38.4
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
+.+|.+|-. .+-..+++.|+++|.+||.|-+..++.|.|.||..+.-
T Consensus 92 dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 141 (334)
T 3hba_A 92 GLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIPL 141 (334)
T ss_dssp CEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEEC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeeee
Confidence 567777765 46677889999999999999987778999999987754
No 93
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=78.37 E-value=3.4 Score=32.70 Aligned_cols=75 Identities=16% Similarity=-0.021 Sum_probs=46.3
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-cC---CcEEEEccCC-Cccc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-RC---LKTVVVGDIN-DGAL 110 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-r~---l~TVVVGd~~-~~~L 110 (198)
+-.+|+++|+.+-.+|.+|... +++ .+...|++.++-.. .+=.++++.+.+ .| -.+++|||+. |-..
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~---~~~---~l~~lgi~~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~ 155 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKL---LED---RANTLGITHLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV 155 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH---HHH---HHHHHTCCEEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHH---HHH---HHHHcCCchhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH
Confidence 4578999999999999988743 122 22245777655433 233455555544 44 4689999953 3444
Q ss_pred cchhcccc
Q 039912 111 KRISYACF 118 (198)
Q Consensus 111 ~R~AD~~f 118 (198)
.+.|++.+
T Consensus 156 ~~~ag~~~ 163 (211)
T 3ij5_A 156 MAQVGLSV 163 (211)
T ss_dssp HTTSSEEE
T ss_pred HHHCCCEE
Confidence 55666543
No 94
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=78.18 E-value=1 Score=36.58 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=45.8
Q ss_pred CchhHhhhcceEEEecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 35 GLIGELKRGGLWVRTASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
++...|+++|+-|..... .+...| ....+..+...+.+.|++.+.+.+...+++.+++.|++.-++|-
T Consensus 162 ~~~~~l~~~G~~v~~~~~~~~~~~d--~~~~~~~l~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 230 (392)
T 3lkb_A 162 DARKAARELGLQIVDVQEVGSGNLD--NTALLKRFEQAGVEYVVHQNVAGPVANILKDAKRLGLKMRHLGA 230 (392)
T ss_dssp HHHHHHHHHTCEEEEEEECCTTCCC--CHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHHcCCeEEEEEeeCCCCcC--HHHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCceEEEe
Confidence 345678888987642111 111111 12223334467899999999999999999999999999877775
No 95
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=78.01 E-value=0.92 Score=36.43 Aligned_cols=67 Identities=9% Similarity=0.089 Sum_probs=45.2
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|+++|+-|....-.+...| ....+..+...+.+.|++.+.+.+...+++.+++.|++..++|-
T Consensus 170 ~~~~~~~~G~~v~~~~~~~~~~d--~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 236 (366)
T 3td9_A 170 FINKFTELGGQVKRVFFRSGDQD--FSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAG 236 (366)
T ss_dssp HHHHHHHTTCEEEEEEECTTCCC--CHHHHHHHHHTCCSEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHCCCEEEEEEeCCCCcc--HHHHHHHHHhcCCCEEEEccchhHHHHHHHHHHHcCCCceEEee
Confidence 45567888887643221111111 12233344467899999989999999999999999998877764
No 96
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=77.98 E-value=7.2 Score=27.83 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=33.9
Q ss_pred HHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCCccccc
Q 039912 61 LRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 61 Lkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
|.+....+...|+.+-+.|...+--..+++.|++.+...||+|-...+.++|
T Consensus 85 l~~~~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~g~~~~~~ 136 (162)
T 1mjh_A 85 MENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKE 136 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCSSCCTT
T ss_pred HHHHHHHHHHcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCCCCCCccc
Confidence 3333333445687764333334566789999999999999999864344443
No 97
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=77.50 E-value=4.9 Score=28.87 Aligned_cols=75 Identities=15% Similarity=0.023 Sum_probs=44.6
Q ss_pred hhHhhhcceEEEecCCCcchH-HHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC---cEEEEccCC-Ccccc
Q 039912 37 IGELKRGGLWVRTASDKPQAT-DVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL---KTVVVGDIN-DGALK 111 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAA-D~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l---~TVVVGd~~-~~~L~ 111 (198)
-..|++.|+.+-.+|..|... ...+ ...|++..+-.. -+.-..+.+.+++.++ .+++|||+. |-...
T Consensus 40 l~~l~~~g~~~~i~T~~~~~~~~~~~-------~~~gl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~ 111 (164)
T 3e8m_A 40 IFWAHNKGIPVGILTGEKTEIVRRRA-------EKLKVDYLFQGV-VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLL 111 (164)
T ss_dssp HHHHHHTTCCEEEECSSCCHHHHHHH-------HHTTCSEEECSC-SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHH-------HHcCCCEeeccc-CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 578999999999999988643 2222 245777654332 2333333344444554 699999953 33445
Q ss_pred chhccccc
Q 039912 112 RISYACFS 119 (198)
Q Consensus 112 R~AD~~fs 119 (198)
+.|.+.+-
T Consensus 112 ~~ag~~~~ 119 (164)
T 3e8m_A 112 KRVGIAGV 119 (164)
T ss_dssp TTSSEEEC
T ss_pred HHCCCeEE
Confidence 55555443
No 98
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=78.91 E-value=0.48 Score=38.12 Aligned_cols=80 Identities=19% Similarity=0.156 Sum_probs=50.2
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC-CCccccchh
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI-NDGALKRIS 114 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~A 114 (198)
+-..|++.|+.+-.+|.+|+..=..+-+ ..|++.++-..-...|..+++.-...+-++++|||+ +|-.-.+.|
T Consensus 144 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~------~~gl~~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~A 217 (263)
T 2yj3_A 144 YLEKLKNEGLKIIILSGDKEDKVKELSK------ELNIQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALA 217 (263)
Confidence 4467888999988888877643112212 235543221111446777777766666689999995 445567778
Q ss_pred cccccHH
Q 039912 115 YACFSWW 121 (198)
Q Consensus 115 D~~fsW~ 121 (198)
++.+.|-
T Consensus 218 gv~va~g 224 (263)
T 2yj3_A 218 DVSVAMG 224 (263)
Confidence 8877774
No 99
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=77.17 E-value=4.5 Score=30.44 Aligned_cols=41 Identities=5% Similarity=-0.203 Sum_probs=27.0
Q ss_pred HHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 63 NHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 63 rhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.-+..+...|+..+++.+-. .=.++.+.|+++|++ +||..|
T Consensus 84 ~v~~~~~~~g~~~i~~~~~~-~~~~l~~~a~~~Gi~--~igpnc 124 (138)
T 1y81_A 84 QVAKEAVEAGFKKLWFQPGA-ESEEIRRFLEKAGVE--YSFGRC 124 (138)
T ss_dssp HHHHHHHHTTCCEEEECTTS-CCHHHHHHHHHHTCE--EECSCC
T ss_pred HHHHHHHHcCCCEEEEcCcc-HHHHHHHHHHHCCCE--EEcCCc
Confidence 33333446788887766632 335778888888887 678765
No 100
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=76.85 E-value=6.1 Score=32.10 Aligned_cols=69 Identities=10% Similarity=0.055 Sum_probs=42.6
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
|+..++++.|+.+.......... ......+..+..++++.||+++-...-..++..+...++..|+++.
T Consensus 82 gi~~~a~~~g~~~~~~~~~~~~~-~~~~~~l~~l~~~~vdGiIi~~~~~~~~~~~~~~~~~~iPvV~i~~ 150 (349)
T 1jye_A 82 AILSRADQLGASVVVSMVERSGV-EACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDV 150 (349)
T ss_dssp HHHHHHHHTTCEEEEEECCSSSH-HHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSS
T ss_pred HHHHHHHHcCCEEEEEeCCCCcH-HHHHHHHHHHHHCCCCEEEEecCCCChhHHHHHHhhCCCCEEEEcc
Confidence 66778899999887543221111 1223445566688999999984322222334456668999998874
No 101
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=76.84 E-value=4.8 Score=30.62 Aligned_cols=76 Identities=14% Similarity=0.095 Sum_probs=44.2
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC-CCccccchhcc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI-NDGALKRISYA 116 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~ 116 (198)
..|+..|+.+-.++.+|... +.. .+...|+...+...=.++=+..++...+. .++++|||+ +|-...+.|.+
T Consensus 154 ~~l~~~g~~~~i~T~~~~~~---~~~---~~~~~gl~~~f~~~~~~~k~~~~k~~~~~-~~~~~vGD~~nDi~~~~~Ag~ 226 (280)
T 3skx_A 154 SKLKAIGIKCMMLTGDNRFV---AKW---VAEELGLDDYFAEVLPHEKAEKVKEVQQK-YVTAMVGDGVNDAPALAQADV 226 (280)
T ss_dssp HHHHHTTCEEEEECSSCHHH---HHH---HHHHHTCSEEECSCCGGGHHHHHHHHHTT-SCEEEEECTTTTHHHHHHSSE
T ss_pred HHHHHCCCEEEEEeCCCHHH---HHH---HHHHcCChhHhHhcCHHHHHHHHHHHHhc-CCEEEEeCCchhHHHHHhCCc
Confidence 56888899888888887643 111 11234665443222222334455544443 388999995 44555667776
Q ss_pred cccH
Q 039912 117 CFSW 120 (198)
Q Consensus 117 ~fsW 120 (198)
.+.|
T Consensus 227 ~va~ 230 (280)
T 3skx_A 227 GIAI 230 (280)
T ss_dssp EEEC
T ss_pred eEEe
Confidence 6655
No 102
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=76.79 E-value=2.1 Score=36.77 Aligned_cols=45 Identities=16% Similarity=0.045 Sum_probs=37.2
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhcccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACF 118 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~f 118 (198)
+.+|.+|-. .+-..+++.|+++|.+||.|-+..++.|.|.||..+
T Consensus 91 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l 138 (347)
T 3fkj_A 91 SVVILASQQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYII 138 (347)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEE
T ss_pred CEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEE
Confidence 567777754 456678889999999999999877789999999876
No 103
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=76.56 E-value=1.6 Score=35.19 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=44.8
Q ss_pred chhHhhhcceEEEecC-CCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcE--EEEccC
Q 039912 36 LIGELKRGGLWVRTAS-DKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKT--VVVGDI 105 (198)
Q Consensus 36 La~ELrRAGv~VrtVs-dKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~T--VVVGd~ 105 (198)
+...|+++|.-|-... -.+...| ...++..+.+.+.+.|++.++..+...+++.+++.|+.. +++|..
T Consensus 160 ~~~~~~~~G~~v~~~~~~~~~~~d--~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~ 230 (375)
T 3i09_A 160 TADVVKANGGKVLGEVRHPLSASD--FSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKEFGITKTMKLAALL 230 (375)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCSC--CHHHHHHHHHTCCSEEEEECCHHHHHHHHHHHHHTTGGGTCEEEESS
T ss_pred HHHHHHHcCCEEeeeeeCCCCCcc--HHHHHHHHHhCCCCEEEEecCchhHHHHHHHHHHcCCCcCceEEecc
Confidence 3456778887763211 1111111 122333444678999999998889999999999999876 577764
No 104
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=76.50 E-value=3.4 Score=38.45 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=50.7
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC-CCccccchhcc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI-NDGALKRISYA 116 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~ 116 (198)
..|+++|+.|-.++..+...=.++- ...|++.++.-.-..+=..+++.-+++ -.++.|||+ ||-.--+.||+
T Consensus 467 ~~L~~~Gi~v~~~TGd~~~~a~~ia------~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~v 539 (645)
T 3j08_A 467 QELKRMGIKVGMITGDNWRSAEAIS------RELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADL 539 (645)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHH------HHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSE
T ss_pred HHHHHCCCEEEEEeCCCHHHHHHHH------HHcCCCEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCE
Confidence 5677888888877777764422222 245777665555556677777777666 578899995 55555577898
Q ss_pred cccHH
Q 039912 117 CFSWW 121 (198)
Q Consensus 117 ~fsW~ 121 (198)
++.+.
T Consensus 540 giamg 544 (645)
T 3j08_A 540 GIAVG 544 (645)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 87654
No 105
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=76.30 E-value=0.78 Score=36.59 Aligned_cols=64 Identities=11% Similarity=-0.028 Sum_probs=43.6
Q ss_pred chhHhhhcceEEE---ecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWVR---TASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|+++|+-|. .++. ..... . .+..+.+.+.+.|++.+|..+...+++.+++.|++.-+||-
T Consensus 159 ~~~~l~~~g~~v~~~~~~~~~~~~~~-~----~~~~l~~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~ 226 (358)
T 3hut_A 159 FRKAFELRGGAVVVNEEVPPGNRRFD-D----VIDEIEDEAPQAIYLAMAYEDAAPFLRALRARGSALPVYGS 226 (358)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCCCCH-H----HHHHHHHHCCSEEEEESCHHHHHHHHHHHHHTTCCCCEEEC
T ss_pred HHHHHHHcCCEEEEEEecCCCCccHH-H----HHHHHHhcCCCEEEEccCchHHHHHHHHHHHcCCCCcEEec
Confidence 4567788887663 2222 22222 1 22333356889999988888999999999999998777764
No 106
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=75.76 E-value=8.7 Score=28.45 Aligned_cols=61 Identities=13% Similarity=0.047 Sum_probs=36.5
Q ss_pred hhHhhhcceEEEecCCCcc--hHHHHHHHHHHHHhhcCcc----EEEEEeCCcchHHHHHHHHhcCC---cEEEEccC
Q 039912 37 IGELKRGGLWVRTASDKPQ--ATDVLLRNHLVITHKRRIE----YLVVVSDDSDFVEVLLEANLRCL---KTVVVGDI 105 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPq--AAD~ALkrhm~~m~~~gv~----clvLVSDdsdF~~~Lr~Ar~r~l---~TVVVGd~ 105 (198)
-..|++.|+.+-.+|..|. .+...|++ .|+. .++. +..++-..+.+.+++.|+ ++++|||.
T Consensus 77 L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-------~gl~~~f~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~igD~ 146 (187)
T 2wm8_A 77 LKRLQSLGVPGAAASRTSEIEGANQLLEL-------FDLFRYFVHREI-YPGSKITHFERLQQKTGIPFSQMIFFDDE 146 (187)
T ss_dssp HHHHHHHTCCEEEEECCSCHHHHHHHHHH-------TTCTTTEEEEEE-SSSCHHHHHHHHHHHHCCCGGGEEEEESC
T ss_pred HHHHHHCCceEEEEeCCCChHHHHHHHHH-------cCcHhhcceeEE-EeCchHHHHHHHHHHcCCChHHEEEEeCC
Confidence 4567888999988888872 34333332 3443 3333 334444444555566676 48999996
No 107
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=75.64 E-value=1.7 Score=34.69 Aligned_cols=64 Identities=9% Similarity=0.063 Sum_probs=43.5
Q ss_pred chhHhhhcceEEE---ecC-CCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWVR---TAS-DKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVs-dKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|+++|+-|. .++ ..+.. ...+..+.+.+.+.|++.++..+...+++.+++.|++.-++|-
T Consensus 179 ~~~~l~~~g~~v~~~~~~~~~~~d~-----~~~~~~~~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 246 (386)
T 3sg0_A 179 LAAAAPKLGFELTTHEVYARSDASV-----TGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAIYQT 246 (386)
T ss_dssp HHHHHHHHTCEECCCEEECTTCSCC-----HHHHHHHHHTCCSEEEEECCSGGGHHHHHHHHHTTCCSEEECC
T ss_pred HHHHHHHcCCEEEEEEeeCCCCCcH-----HHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCCcEEec
Confidence 4567788887663 122 11121 1223344467899999999989999999999999998666653
No 108
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=75.35 E-value=7.4 Score=27.07 Aligned_cols=54 Identities=9% Similarity=0.027 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhcCc-cEEEEEeCCcchHHHHH-HHHhcCCcEEEEccCCCccccc
Q 039912 59 VLLRNHLVITHKRRI-EYLVVVSDDSDFVEVLL-EANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv-~clvLVSDdsdF~~~Lr-~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
..|.+....+...|+ .+-..+...+-...+++ .|++.+...||+|-...+.+.+
T Consensus 69 ~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~ 124 (146)
T 3s3t_A 69 DAMRQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATGTNSPHR 124 (146)
T ss_dssp HHHHHHHHHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCCSSCTTT
T ss_pred HHHHHHHHHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCCCCCcce
Confidence 334444444546677 55333333345677889 8999999999999864344443
No 109
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=75.10 E-value=7.9 Score=28.17 Aligned_cols=52 Identities=15% Similarity=0.072 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCCcccc
Q 039912 60 LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGALK 111 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~ 111 (198)
.|.+....+...|+.+-+.|....-...|++.|++.+..-||+|-...+.++
T Consensus 88 ~l~~~~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~g~~~~~ 139 (175)
T 2gm3_A 88 LLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQ 139 (175)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEESCHHHHHHHHHHHHCCSEEEEEECCCC---
T ss_pred HHHHHHHHHHHCCCceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCCChhh
Confidence 3444333444567776443333455788999999999999999986433343
No 110
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=75.01 E-value=2.4 Score=33.39 Aligned_cols=65 Identities=18% Similarity=0.162 Sum_probs=42.5
Q ss_pred chhHhhhcceEEE---ecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWVR---TASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|++.|+-|. .+... ..|. ...+..+.+.+.+.|++.+++.+...+++.+++.|++.-++|-
T Consensus 158 ~~~~l~~~g~~v~~~~~~~~~--~~d~--~~~~~~l~~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (346)
T 1usg_A 158 VQDGLKAANANVVFFDGITAG--EKDF--SALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 225 (346)
T ss_dssp HHHHHHHTTCCEEEEEECCTT--CCCC--HHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHcCCEEEEEeccCCC--CcCH--HHHHHHHHhcCCCEEEEcCcchHHHHHHHHHHHcCCCCeEEec
Confidence 3456778887653 22211 1111 1233334356899999998888899999999999987666663
No 111
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=74.99 E-value=2.7 Score=35.95 Aligned_cols=47 Identities=17% Similarity=0.124 Sum_probs=37.7
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
+.+|.+|-. .+-..+++.|+++|.+||.|-+..++.|.|.||..+.=
T Consensus 93 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~ 142 (344)
T 3fj1_A 93 ALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTIDI 142 (344)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEEC
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeeec
Confidence 456677654 46677889999999999999887678999999987653
No 112
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=74.89 E-value=2.2 Score=34.85 Aligned_cols=67 Identities=12% Similarity=-0.028 Sum_probs=45.5
Q ss_pred chhHhhhcceEEEe-cCCCcchHHHHHHHHHHH--HhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWVRT-ASDKPQATDVLLRNHLVI--THKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~Vrt-VsdKPqAAD~ALkrhm~~--m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|+++|+-|.. ..-.+...| ....+.. +.+.+.+.|++.++..+...+++.+++.|++.-++|.
T Consensus 162 ~~~~l~~~G~~v~~~~~~~~~~~d--~~~~~~~~~l~~~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (391)
T 3eaf_A 162 IKKAAPSLGLQVVGDYDLPLRATE--ADAERIAREMLAADPDYVWCGNTISSCSLLGRAMAKVGLDAFLLTN 231 (391)
T ss_dssp HHHHTGGGTEEEEEEEECCTTCCH--HHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHcCCceeeeeccCCCCcC--HHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCCceEEEe
Confidence 34567788987642 111122222 2223334 4467999999999989999999999999998877775
No 113
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=74.87 E-value=5.9 Score=30.93 Aligned_cols=61 Identities=5% Similarity=-0.093 Sum_probs=29.8
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK 98 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~ 98 (198)
..|+++|+.+-.+..-...+-..+++.+......|+.+|++......|..+.+.|++.|++
T Consensus 68 ~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~ 128 (257)
T 3lmz_A 68 DKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFH 128 (257)
T ss_dssp HHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCE
T ss_pred HHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCE
Confidence 3444555554432211112333455555544455666665555555555566666655553
No 114
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=73.99 E-value=2.2 Score=34.04 Aligned_cols=65 Identities=9% Similarity=-0.014 Sum_probs=43.6
Q ss_pred chhHhhhcceEEE---ecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWVR---TASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|+++|+-|. .++....-. ...+..+.+.+.+.|++.+.+.....+++.+++.|++.-++|.
T Consensus 171 ~~~~l~~~G~~v~~~~~~~~~~~d~----~~~~~~l~~~~~dai~~~~~~~~a~~~~~~~~~~g~~vp~~~~ 238 (375)
T 4evq_A 171 FKKSFTAGKGEVVKDITIAFPDVEF----QSALAEIASLKPDCVYAFFSGGGALKFIKDYAAANLGIPLWGP 238 (375)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCCCC----HHHHHHHHHHCCSEEEEECCTHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHcCCeEEEEEecCCCCccH----HHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCceEEec
Confidence 4567788888653 222111111 1223333355899999988889999999999999999777775
No 115
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=73.83 E-value=1.9 Score=34.33 Aligned_cols=65 Identities=9% Similarity=0.027 Sum_probs=43.9
Q ss_pred chhHhhhcceEE---EecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWV---RTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~V---rtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|+++|+-| ..++ +...| ....+..+...+.+.|++.+.+.+...+++.++++|++.-+||-
T Consensus 158 ~~~~l~~~g~~v~~~~~~~--~~~~d--~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (356)
T 3ipc_A 158 TKKAANAAGVTEVMYEGVN--VGDKD--FSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSG 225 (356)
T ss_dssp HHHHHHHTTCCCSEEEECC--TTCCC--CHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHcCCEEEEEEeeC--CCCCC--HHHHHHHHHhcCCCEEEEccCchHHHHHHHHHHHCCCCCcEEEe
Confidence 456777888754 2222 11111 11223334467899999999999999999999999999877764
No 116
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=73.81 E-value=2.6 Score=35.96 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=36.3
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcC-CcEEEEccCCCccccchhccccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRC-LKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~-l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+++|.+|-. .+-..+++.|+++| .++|.|-+..++.|.+.||..+.
T Consensus 101 dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~ 150 (368)
T 1moq_A 101 SLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALM 150 (368)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEE
Confidence 456777754 45667788889999 99999988777899999997664
No 117
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=73.70 E-value=2.3 Score=32.99 Aligned_cols=66 Identities=14% Similarity=0.138 Sum_probs=42.0
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++.||+.+-+.+- +.++.+ .++..|+++..
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~l--~~iPvV~~~~~ 93 (288)
T 2qu7_A 28 EISHECQKHHLHVAVASSEENED--KQQDLIETFVSQNVSAIILVPVKSKF-QMKREW--LKIPIMTLDRE 93 (288)
T ss_dssp HHHHHHGGGTCEEEEEECTTCHH--HHHHHHHHHHHTTEEEEEECCSSSCC-CCCGGG--GGSCEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHHcCccEEEEecCCCCh-HHHHHh--cCCCEEEEecc
Confidence 56677788888887654333222 22334456668899999998754321 234444 78999999764
No 118
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=73.70 E-value=7.8 Score=27.98 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhhcCccEEE--EEeCCcchHHHHHHHHhcCCcEEEEccCCCcccc
Q 039912 59 VLLRNHLVITHKRRIEYLV--VVSDDSDFVEVLLEANLRCLKTVVVGDINDGALK 111 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv~clv--LVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~ 111 (198)
..|.+....+...|+.+-+ .+...+-...+++.|++.+..-||+|-...+.+.
T Consensus 78 ~~l~~~~~~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~g~~~~~ 132 (170)
T 2dum_A 78 RKLQEKAEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGKLSLS 132 (170)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCCCC--
T ss_pred HHHHHHHHHHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCCCCCccc
Confidence 3444444444455776533 3333345678999999999999999986433333
No 119
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=72.83 E-value=2 Score=34.22 Aligned_cols=63 Identities=14% Similarity=0.147 Sum_probs=41.4
Q ss_pred chhHhhhcceEEE---ecC-CCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc---EEEEc
Q 039912 36 LIGELKRGGLWVR---TAS-DKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK---TVVVG 103 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVs-dKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~---TVVVG 103 (198)
+...|+++|.-|- .++ +.+... ..+..+.+.+.+.|++.+.+.+...+++.+++.|++ ..++|
T Consensus 159 ~~~~l~~~g~~v~~~~~~~~~~~d~~-----~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~v~~~~ 228 (368)
T 4eyg_A 159 FKERFTAGGGEIVEEIKVPLANPDFA-----PFLQRMKDAKPDAMFVFVPAGQGGNFMKQFAERGLDKSGIKVIG 228 (368)
T ss_dssp HHHHHHHTTCEEEEEEEECSSSCCCH-----HHHHHHHHHCCSEEEEECCTTCHHHHHHHHHHTTGGGTTCEEEE
T ss_pred HHHHHHHcCCEEEEEEeCCCCCCcHH-----HHHHHHHhcCCCEEEEeccchHHHHHHHHHHHcCCCcCCceEEe
Confidence 3456778887653 222 222221 223334356899999988888999999999999998 34554
No 120
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=72.44 E-value=17 Score=26.97 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=37.1
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE---EEEEeCCc--------chHHHHHH-HHhcCC---cEE
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY---LVVVSDDS--------DFVEVLLE-ANLRCL---KTV 100 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c---lvLVSDds--------dF~~~Lr~-Ar~r~l---~TV 100 (198)
+-..|+++|+.+-.+|..|...-..+.. .+...|+.. .++.|++. --..+++. +++.|+ +++
T Consensus 42 ~L~~L~~~g~~~~i~Tn~~~~~~~~~~~---~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l 118 (189)
T 3ib6_A 42 TLEKVKQLGFKQAILSNTATSDTEVIKR---VLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAV 118 (189)
T ss_dssp HHHHHHHTTCEEEEEECCSSCCHHHHHH---HHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHCCCEEEEEECCCccchHHHHH---HHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEE
Confidence 3467888899988888887532122333 222456532 44555542 12233333 333454 589
Q ss_pred EEccC
Q 039912 101 VVGDI 105 (198)
Q Consensus 101 VVGd~ 105 (198)
+|||.
T Consensus 119 ~VGD~ 123 (189)
T 3ib6_A 119 MVGNT 123 (189)
T ss_dssp EEESB
T ss_pred EECCC
Confidence 99997
No 121
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=72.43 E-value=7.9 Score=29.03 Aligned_cols=45 Identities=13% Similarity=-0.013 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 59 VLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.+....+..+...|+..++ ++....-.++++.|++.|++ +||..|
T Consensus 88 ~~~~~vv~~~~~~gi~~i~-~~~g~~~~~l~~~a~~~Gi~--vvGpnc 132 (144)
T 2d59_A 88 KLTMEYVEQAIKKGAKVVW-FQYNTYNREASKKADEAGLI--IVANRC 132 (144)
T ss_dssp HHHHHHHHHHHHHTCSEEE-ECTTCCCHHHHHHHHHTTCE--EEESCC
T ss_pred HHHHHHHHHHHHcCCCEEE-ECCCchHHHHHHHHHHcCCE--EEcCCc
Confidence 3444444455577888775 44444567888889999987 788876
No 122
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=72.12 E-value=7 Score=29.59 Aligned_cols=76 Identities=20% Similarity=0.033 Sum_probs=44.9
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHH-HhcCC---cEEEEccCC-Cccc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEA-NLRCL---KTVVVGDIN-DGAL 110 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~A-r~r~l---~TVVVGd~~-~~~L 110 (198)
+-.+|+++|+.+-.+|.+|...=..+-+ ..|++-++-.. .+- .++++.+ ++.|+ .+++|||+. |-..
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~------~lgl~~~f~~~-~~K-~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~ 125 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAK------SLGIEHLFQGR-EDK-LVVLDKLLAELQLGYEQVAYLGDDLPDLPV 125 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHH------HHTCSEEECSC-SCH-HHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHH------HcCCHHHhcCc-CCh-HHHHHHHHHHcCCChhHEEEECCCHHHHHH
Confidence 5578999999999999998743122222 34666544322 222 2444444 44454 589999953 3444
Q ss_pred cchhccccc
Q 039912 111 KRISYACFS 119 (198)
Q Consensus 111 ~R~AD~~fs 119 (198)
.+.|++.+-
T Consensus 126 ~~~ag~~~~ 134 (189)
T 3mn1_A 126 IRRVGLGMA 134 (189)
T ss_dssp HHHSSEEEE
T ss_pred HHHCCCeEE
Confidence 556666543
No 123
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=71.87 E-value=3.9 Score=33.25 Aligned_cols=67 Identities=10% Similarity=0.035 Sum_probs=43.1
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..+++ |+.+..+...+.... ...+.+..+..++++.||+++-. .-.+.++.+.+.++..|+|+..
T Consensus 94 gi~~~a~--g~~~~~~~~~~~~~~-~~~~~~~~l~~~~vdGiIi~~~~-~~~~~~~~l~~~~iPvV~i~~~ 160 (366)
T 3h5t_A 94 GVAQAAG--DTQLTLIPASPASSV-DHVSAQQLVNNAAVDGVVIYSVA-KGDPHIDAIRARGLPAVIADQP 160 (366)
T ss_dssp HHHHHSS--SCEEEEEECCCCTTC-CHHHHHHHHHTCCCSCEEEESCC-TTCHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHh--hCCEEEEEcCCCccH-HHHHHHHHHHhCCCCEEEEecCC-CChHHHHHHHHCCCCEEEECCc
Confidence 4555555 777665433332210 12334446668999999998653 2346788888899999999864
No 124
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=70.12 E-value=4.1 Score=38.98 Aligned_cols=87 Identities=18% Similarity=0.166 Sum_probs=50.9
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC-CCccccchhcc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI-NDGALKRISYA 116 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~ 116 (198)
.+|+++|+.|-.++..+...=.++-+ ..||+.++.-....+-..+++.-++.+-.+..|||+ ||-.-=+.||+
T Consensus 564 ~~L~~~Gi~v~mlTGd~~~~a~~ia~------~lgi~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~Adv 637 (736)
T 3rfu_A 564 LELQQSGIEIVMLTGDSKRTAEAVAG------TLGIKKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADI 637 (736)
T ss_dssp HHHHHHTCEEEEECSSCHHHHHHHHH------HHTCCCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSE
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHH------HcCCCEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCE
Confidence 35666666666666555432112211 345554443333345567788888888899999995 55444567888
Q ss_pred cccHHHHhhchhhhhhhhh
Q 039912 117 CFSWWDILMGKARKEAVSV 135 (198)
Q Consensus 117 ~fsW~eV~~Gka~k~A~~~ 135 (198)
++. +|.+...|.+.
T Consensus 638 GIA-----mg~g~d~a~~~ 651 (736)
T 3rfu_A 638 GIA-----MGTGTDVAIES 651 (736)
T ss_dssp EEE-----ESSSCSHHHHH
T ss_pred EEE-----eCCccHHHHHh
Confidence 764 55555444443
No 125
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=70.00 E-value=2.9 Score=33.88 Aligned_cols=61 Identities=10% Similarity=-0.033 Sum_probs=42.5
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+....... . ....+.+..+..++++.|++.+- +..+++.++..|+|+-.
T Consensus 85 gi~~~a~~~g~~~~~~~~~~--~-~~~~~~~~~l~~~~vdGiIi~~~-------~~~~~~~~iPvV~~~~~ 145 (333)
T 3jvd_A 85 TIQQDLKAAGYQMLVAEANS--V-QAQDVVMESLISIQAAGIIHVPV-------VGSIAPEGIPMVQLTRG 145 (333)
T ss_dssp HHHHHHHHHTCEEEEEECCS--H-HHHHHHHHHHHHHTCSEEEECCC-------TTCCC-CCSCEEEECC-
T ss_pred HHHHHHHHCCCEEEEECCCC--h-HHHHHHHHHHHhCCCCEEEEcch-------HHHHhhCCCCEEEECcc
Confidence 67788899999887654433 1 12234445666889999999876 56677789999999764
No 126
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=69.92 E-value=10 Score=29.93 Aligned_cols=67 Identities=18% Similarity=0.126 Sum_probs=48.2
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+...-.++...+. ..|..+.++..|-++...+-+...+. ++..||-
T Consensus 42 G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 113 (271)
T 4iin_A 42 GAEIAKTLASMGLKVWINYRSNAEVADALKNELE---EKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVN 113 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 6678999999999998776655544455555444 45778888888988887776666543 6776664
No 127
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=69.47 E-value=3.2 Score=31.93 Aligned_cols=64 Identities=11% Similarity=0.069 Sum_probs=38.7
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|+..++++.|+.+...... ... ...+.+..+.+++++.|| ++.+.. .+.+.. .++..|+|+...
T Consensus 26 gi~~~a~~~g~~~~~~~~~-~~~--~~~~~~~~l~~~~vdgiI-~~~~~~-~~~~~~---~~iPvV~~~~~~ 89 (280)
T 3gyb_A 26 SLSDVLTPKGYRLSVIDSL-TSQ--AGTDPITSALSMRPDGII-IAQDIP-DFTVPD---SLPPFVIAGTRI 89 (280)
T ss_dssp HHHHHHGGGTCEEEEECSS-SSC--SSSCHHHHHHTTCCSEEE-EESCC------------CCCEEEESCCC
T ss_pred HHHHHHHHCCCEEEEEeCC-Cch--HHHHHHHHHHhCCCCEEE-ecCCCC-hhhHhh---cCCCEEEECCCC
Confidence 6677889999998865544 211 112233456689999999 776655 344444 899999998653
No 128
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=68.76 E-value=2 Score=33.75 Aligned_cols=65 Identities=8% Similarity=-0.027 Sum_probs=42.2
Q ss_pred chhHhhhcceEEE---ecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 36 LIGELKRGGLWVR---TASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+...|+++|+-|- .++....-. ...+..+.+.+.+.|++.+.+.....+++.+++.|++.-+||-
T Consensus 155 ~~~~l~~~g~~v~~~~~~~~~~~~~----~~~~~~l~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~p~i~~ 222 (362)
T 3snr_A 155 LKKQGEAMGLKIVGEERFARPDTSV----AGQALKLVAANPDAILVGASGTAAALPQTTLRERGYNGLIYQT 222 (362)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCSCC----HHHHHHHHHHCCSEEEEECCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHcCCEEEEEeecCCCCCCH----HHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCccEEec
Confidence 4567788887653 222211111 1122233356899999999889999999999999987555543
No 129
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=68.57 E-value=26 Score=24.09 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=36.1
Q ss_pred chHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCCccccch
Q 039912 55 QATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGALKRI 113 (198)
Q Consensus 55 qAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~ 113 (198)
+.+...|.+....+...|+.+-..|...+-...+++.|+ +..-||+|-...+.+.+.
T Consensus 62 ~~~~~~l~~~~~~~~~~g~~~~~~v~~g~~~~~I~~~a~--~~dliV~G~~~~~~~~~~ 118 (138)
T 3idf_A 62 EKAKLLTQKFSTFFTEKGINPFVVIKEGEPVEMVLEEAK--DYNLLIIGSSENSFLNKI 118 (138)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCEEEEEESCHHHHHHHHHT--TCSEEEEECCTTSTTSSC
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEecCChHHHHHHHHh--cCCEEEEeCCCcchHHHH
Confidence 334444554444555678876444444455677888888 999999998654455443
No 130
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=68.14 E-value=8.7 Score=28.65 Aligned_cols=72 Identities=22% Similarity=0.166 Sum_probs=38.1
Q ss_pred hhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc---EEEEEeCCcchH-----HHHHHHHhcCCcEEEEccCC--
Q 039912 37 IGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE---YLVVVSDDSDFV-----EVLLEANLRCLKTVVVGDIN-- 106 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~---clvLVSDdsdF~-----~~Lr~Ar~r~l~TVVVGd~~-- 106 (198)
-.+|++.|+.+-.+|..|..+ ...+. ..|+. ..++.|++.... -+.+.+++.|+..++|||+.
T Consensus 104 l~~l~~~g~~~~i~Tn~~~~~----~~~l~---~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~vgD~~~~ 176 (220)
T 2zg6_A 104 LEGLKSNGYKLALVSNASPRV----KTLLE---KFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPAVHVGDIYEL 176 (220)
T ss_dssp HHHHHTTTCEEEECCSCHHHH----HHHHH---HHTCGGGCSEEC-----------CCHHHHHHHHHCSSEEEEESSCCC
T ss_pred HHHHHHCCCEEEEEeCCcHHH----HHHHH---hcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCeEEEcCCchH
Confidence 456888999999999987533 22222 23543 134445543322 23444555677779999974
Q ss_pred Cccccchhc
Q 039912 107 DGALKRISY 115 (198)
Q Consensus 107 ~~~L~R~AD 115 (198)
+-..++.|-
T Consensus 177 Di~~a~~aG 185 (220)
T 2zg6_A 177 DYIGAKRSY 185 (220)
T ss_dssp CCCCSSSCS
T ss_pred hHHHHHHCC
Confidence 323344444
No 131
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=68.12 E-value=22 Score=25.11 Aligned_cols=64 Identities=20% Similarity=0.186 Sum_probs=37.8
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE---EEEEeCCc-----chHHHHHHHHhcCC-cEEEEccCC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY---LVVVSDDS-----DFVEVLLEANLRCL-KTVVVGDIN 106 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c---lvLVSDds-----dF~~~Lr~Ar~r~l-~TVVVGd~~ 106 (198)
+-..|++.|+.+-.++..|......|. ..|+.. .++.|++. .-..+.+.+++.|+ .+++|||+.
T Consensus 90 ~l~~l~~~g~~~~i~t~~~~~~~~~l~-------~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~iGD~~ 162 (190)
T 2fi1_A 90 LLEDISNQGGRHFLVSHRNDQVLEILE-------KTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIGDRP 162 (190)
T ss_dssp HHHHHHHTTCEEEEECSSCTHHHHHHH-------HTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEESSH
T ss_pred HHHHHHHCCCcEEEEECCcHHHHHHHH-------HcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCCeEEEEcCCH
Confidence 345677889999888888764433332 234432 23334332 22334555566666 799999973
No 132
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=67.98 E-value=7.9 Score=25.82 Aligned_cols=71 Identities=15% Similarity=0.024 Sum_probs=45.7
Q ss_pred CCCchhHhhhcc-eEEEecCCCcchHHHHHH-------------HHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc
Q 039912 33 GNGLIGELKRGG-LWVRTASDKPQATDVLLR-------------NHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK 98 (198)
Q Consensus 33 gyGLa~ELrRAG-v~VrtVsdKPqAAD~ALk-------------rhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~ 98 (198)
|..++..|.+.| +.|..+...|+..+.+.. ..+..+. .+++.+|..........+++.+.+.|++
T Consensus 17 G~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~~~~~~~~~~~~~~~~~g~~ 95 (118)
T 3ic5_A 17 GQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL-GGFDAVISAAPFFLTPIIAKAAKAAGAH 95 (118)
T ss_dssp HHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHT-TTCSEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHH-cCCCEEEECCCchhhHHHHHHHHHhCCC
Confidence 334677888888 777766666654433220 1222221 3788877777666667888888889988
Q ss_pred EEEEcc
Q 039912 99 TVVVGD 104 (198)
Q Consensus 99 TVVVGd 104 (198)
.+.++.
T Consensus 96 ~~~~~~ 101 (118)
T 3ic5_A 96 YFDLTE 101 (118)
T ss_dssp EECCCS
T ss_pred EEEecC
Confidence 887665
No 133
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=67.77 E-value=7.1 Score=34.32 Aligned_cols=76 Identities=13% Similarity=0.058 Sum_probs=51.8
Q ss_pred ccCCCCCCCc------hhHhhhcceEEE---ecCCCcchHHHHHHHHHHHHh-hcCccEEEEEeCCcchHHHHHHHHhcC
Q 039912 27 VLTPEVGNGL------IGELKRGGLWVR---TASDKPQATDVLLRNHLVITH-KRRIEYLVVVSDDSDFVEVLLEANLRC 96 (198)
Q Consensus 27 lltPkvgyGL------a~ELrRAGv~Vr---tVsdKPqAAD~ALkrhm~~m~-~~gv~clvLVSDdsdF~~~Lr~Ar~r~ 96 (198)
++.....||- -.+|++.|+-|- .++..+...| +...+..+. ..+.+-||+.++..++..+++.|++.|
T Consensus 191 ii~~d~~~g~~~~~~~~~~~~~~gi~v~~~~~~~~~~~~~~--~~~~l~~i~~~s~a~vIi~~~~~~~~~~~~~~~~~~g 268 (555)
T 2e4u_A 191 TVASEGDYGETGIEAFEQEARLRNICIATAEKVGRSNIRKS--YDSVIRELLQKPNARVVVLFMRSDDSRELIAAANRVN 268 (555)
T ss_dssp EEEESSTTHHHHHHHHHHHHHTTTCEEEEEEEECTTCCHHH--HHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTT
T ss_pred EEEeeChHHHHHHHHHHHHHHHCCccEEEEEEeCCCCChHH--HHHHHHHHhccCCCCEEEEEcCHHHHHHHHHHHHHhc
Confidence 4555555663 356778898663 3443233443 445555553 358899999999899999999999999
Q ss_pred CcEEEEcc
Q 039912 97 LKTVVVGD 104 (198)
Q Consensus 97 l~TVVVGd 104 (198)
++.+.||-
T Consensus 269 ~~~~~i~s 276 (555)
T 2e4u_A 269 ASFTWVAS 276 (555)
T ss_dssp CCCEEEEC
T ss_pred CCeEEEEe
Confidence 98777763
No 134
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=67.62 E-value=1.2 Score=35.91 Aligned_cols=38 Identities=5% Similarity=0.005 Sum_probs=32.0
Q ss_pred HHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 67 ITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 67 ~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
.+...+.+.|++.+.+.+...+++.+++.|++.-+||-
T Consensus 191 ~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~ 228 (364)
T 3lop_A 191 KLLAADVQAIFLGATAEPAAQFVRQYRARGGEAQLLGL 228 (364)
T ss_dssp HHHHSCCSEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHhCCCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEe
Confidence 34467899999989899999999999999998777764
No 135
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=67.42 E-value=11 Score=31.38 Aligned_cols=62 Identities=8% Similarity=-0.010 Sum_probs=42.1
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcE
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKT 99 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~T 99 (198)
.+|++.|+-|-...--|...+.-....+..+...+.+-|++.+...+...+++.|++.|+..
T Consensus 151 ~~~~~~g~~v~~~~~~~~~~~~d~~~~l~~ik~~~~~vii~~~~~~~~~~i~~qa~~~g~~~ 212 (389)
T 3o21_A 151 EAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHS 212 (389)
T ss_dssp HHHHHTTCEEEEEECTTCCCTHHHHHHHHHHHTTTCCEEEEESCHHHHHHHHHHHHHHCSCS
T ss_pred HHhhcCCCeEEEEEecCCCCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCccc
Confidence 45667787665332222111112455555665778999999999999999999999999863
No 136
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=67.41 E-value=5.9 Score=32.54 Aligned_cols=60 Identities=12% Similarity=-0.004 Sum_probs=43.0
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK 98 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~ 98 (198)
.+|++.|+-|-... .+...+.-....+..+.+.+.+-|++.+...+...+++.|++.|+.
T Consensus 149 ~~~~~~g~~v~~~~-~~~~~~~d~~~~l~~ik~~~~~vii~~~~~~~~~~~~~qa~~~g~~ 208 (384)
T 3saj_A 149 DTAAEKNWQVTAVN-ILTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKN 208 (384)
T ss_dssp HHHHHHTCEEEEEE-GGGCCHHHHHHTTTTCCSCSEEEEEEECCGGGHHHHHHHHHHTCCT
T ss_pred HHhhhcCceEEEEE-eccCCchhHHHHHHHHhccCCcEEEEEcCHHHHHHHHHHHHHcCCC
Confidence 35667787765433 2222233355555566567899999999999999999999999986
No 137
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=66.82 E-value=9.9 Score=30.42 Aligned_cols=77 Identities=16% Similarity=0.119 Sum_probs=45.0
Q ss_pred chhHhhhcceEEEecCCCcchH-HHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC-Cccccch
Q 039912 36 LIGELKRGGLWVRTASDKPQAT-DVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN-DGALKRI 113 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAA-D~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~-~~~L~R~ 113 (198)
+-..|+.+|+.+-.+|..|... ...|+ ..|++.++-..-......+++.-... -.+++|||+. |-...+.
T Consensus 171 ~l~~L~~~g~~~~i~T~~~~~~~~~~l~-------~~gl~~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ 242 (287)
T 3a1c_A 171 AVQELKRMGIKVGMITGDNWRSAEAISR-------ELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQ 242 (287)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHH-------HHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHH-------HhCCceeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHH
Confidence 3457888999999999998753 22222 34665543211122444444444434 5799999953 3445566
Q ss_pred hcccccH
Q 039912 114 SYACFSW 120 (198)
Q Consensus 114 AD~~fsW 120 (198)
|.+.+.|
T Consensus 243 ag~~v~~ 249 (287)
T 3a1c_A 243 ADLGIAV 249 (287)
T ss_dssp SSEEEEE
T ss_pred CCeeEEe
Confidence 6665544
No 138
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=66.81 E-value=17 Score=28.66 Aligned_cols=60 Identities=25% Similarity=0.409 Sum_probs=43.0
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEeCCcchHH-HHHHHHhcCCcEEEE
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVSDDSDFVE-VLLEANLRCLKTVVV 102 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVSDdsdF~~-~Lr~Ar~r~l~TVVV 102 (198)
+-+++.||.||||.. || -|+..++ -.-+-+..-+|+|-||.+.++ .+|+.+..|.+..+|
T Consensus 20 diikkngfkvrtvrs-pq----elkdsieelvkkynativvvvvddkewaekairfvkslgaqvlii 81 (134)
T 2l69_A 20 DIIKKNGFKVRTVRS-PQ----ELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLII 81 (134)
T ss_dssp HHHHHTTCEEEEECS-HH----HHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEE
T ss_pred HHHHhcCceEEEecC-HH----HHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEE
Confidence 456889999999865 55 4666666 333456666788889988875 688888877775443
No 139
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=66.75 E-value=3.8 Score=35.44 Aligned_cols=46 Identities=20% Similarity=0.319 Sum_probs=36.7
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcC-CcEEEEccCCCccccchhccccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRC-LKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~-l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+++|.+|-. .+-..+++.|+++| .+||.|-+..++.|.|.||..+.
T Consensus 103 dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~ 152 (372)
T 3tbf_A 103 SLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFM 152 (372)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeee
Confidence 446666654 45667788899999 99999998777899999998764
No 140
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=66.51 E-value=4.9 Score=32.63 Aligned_cols=67 Identities=16% Similarity=0.017 Sum_probs=42.9
Q ss_pred chhHhhhc--ceEEEe-cCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC--cEEEEcc
Q 039912 36 LIGELKRG--GLWVRT-ASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL--KTVVVGD 104 (198)
Q Consensus 36 La~ELrRA--Gv~Vrt-VsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l--~TVVVGd 104 (198)
+...|+++ |+-|-. ..-.|...| ....+..+...+.+.|++.+...+...+++.+++.|+ +.-++|.
T Consensus 162 ~~~~l~~~~~g~~vv~~~~~~~~~~d--~~~~~~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 233 (387)
T 3i45_A 162 FKELLLAARPEVTFVAEQWPALYKLD--AGPTVQALQQAEPEGLFNVLFGADLPKFVREGRVRGLFAGRQVVSM 233 (387)
T ss_dssp HHHHHHHHCTTCEEEEEECCCTTCCC--HHHHHHHHHHTCCSEEEECCCTTHHHHHHHHHHHHTSSTTCEEEEE
T ss_pred HHHHHHHhCCCcEEEeeecCCCCCcC--HHHHHHHHHhCCCCEEEEcCccHHHHHHHHHHHHcCCCCCCeEEee
Confidence 34566666 776532 111222222 2233344446789999999899999999999999998 3455554
No 141
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=66.23 E-value=7.8 Score=29.39 Aligned_cols=66 Identities=15% Similarity=0.122 Sum_probs=41.1
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC-cchHHHHHHHHhcCCcEEEEccC
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD-SDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd-sdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.|+..++++.|+.+.......... ...+.+..+.+++++.|++.+-+ .+. +.| ++.++..|+++..
T Consensus 22 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~~-~~l---~~~~~pvV~~~~~ 88 (255)
T 1byk_A 22 QTMLPAFYEQGYDPIMMESQFSPQ--LVAEHLGVLKRRNIDGVVLFGFTGITE-EML---AHWQSSLVLLARD 88 (255)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHTTTCCEEEEECCTTCCT-TTS---GGGSSSEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCcHH--HHHHHHHHHHhcCCCEEEEecCccccH-HHH---HhcCCCEEEEccc
Confidence 367778889999887654333222 11233446668899999998743 332 222 3467888888753
No 142
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=65.65 E-value=8.1 Score=33.64 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=44.7
Q ss_pred hhHhhhcceEEE---ecCCCcchHHHHHHHHH-HHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 37 IGELKRGGLWVR---TASDKPQATDVLLRNHL-VITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 37 a~ELrRAGv~Vr---tVsdKPqAAD~ALkrhm-~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
-.++++.|+-|- .++..+... -....+ ..+...+.+-|++.++..+...+++.|++.|+..+.||-
T Consensus 206 ~~~~~~~Gi~v~~~~~i~~~~~~~--d~~~~l~~~i~~s~a~vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s 275 (479)
T 3sm9_A 206 EQEARLRNISIATAEKVGRSNIRK--SYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWVAS 275 (479)
T ss_dssp HHHHHTTTCEEEEEEEECC--CHH--HHHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHCCceEEEEEEcCCCCChH--HHHHHHHHHHhcCCCeEEEEEcChHHHHHHHHHHHHhCCEEEEEEe
Confidence 457788897764 343333333 233444 234356899999999999999999999999996555553
No 143
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=65.44 E-value=6.9 Score=32.19 Aligned_cols=60 Identities=13% Similarity=0.081 Sum_probs=40.9
Q ss_pred chhHhhh-cceEEEecCCC-cchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc
Q 039912 36 LIGELKR-GGLWVRTASDK-PQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK 98 (198)
Q Consensus 36 La~ELrR-AGv~VrtVsdK-PqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~ 98 (198)
+..+|.+ .|+-|-...-- +...| +...+..+.+ +.+-|++.+...+...+++.|++.|+.
T Consensus 171 ~~~~~~~~~g~~v~~~~~~~~~~~d--~~~~l~~i~~-~~~viv~~~~~~~~~~~~~~a~~~g~~ 232 (435)
T 1dp4_A 171 LYMRVRERLNITVNHQEFVEGDPDH--YPKLLRAVRR-KGRVIYICSSPDAFRNLMLLALNAGLT 232 (435)
T ss_dssp HHHHHHHHHCCEEEEEEECTTCGGG--HHHHHHHHHH-HCSEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhcCeEEEEEEEecCchhh--HHHHHHHHHh-hCceEEEecChHHHHHHHHHHHHcCCC
Confidence 4456677 88776432211 23333 4445555545 788899999888999999999999986
No 144
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=64.42 E-value=4.1 Score=33.72 Aligned_cols=63 Identities=10% Similarity=-0.021 Sum_probs=42.3
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcE---EEEcc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKT---VVVGD 104 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~T---VVVGd 104 (198)
.+|++.|+-|-....-|. | ...++..+.+.+.+.|++.+...+...+++.|++.|+.. +.|+-
T Consensus 176 ~~~~~~g~~v~~~~~~~~--d--~~~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~ 241 (433)
T 4f11_A 176 GVLYGEDIEISDTESFSN--D--PCTSVKKLKGNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIP 241 (433)
T ss_dssp HHSSSSSCEEEEEEEESS--C--CHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTCCSTTCEEEEE
T ss_pred HHHHHcCceEEEEeccCc--C--HHHHHHHHhhCCCeEEEEeCcHHHHHHHHHHHHHcCCCCCCeEEEEc
Confidence 456677877643222222 1 112333444678999999999999999999999999975 55543
No 145
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=64.35 E-value=16 Score=27.30 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=44.9
Q ss_pred hhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-cCC---cEEEEccCC-Ccccc
Q 039912 37 IGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-RCL---KTVVVGDIN-DGALK 111 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-r~l---~TVVVGd~~-~~~L~ 111 (198)
-..|+++|+.+-.+|.+|... ++..+. ..|++.++ +....-..+++.+.+ .|+ ++++|||.. |-...
T Consensus 62 l~~L~~~g~~v~ivT~~~~~~---~~~~l~---~lgl~~~~--~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a 133 (188)
T 2r8e_A 62 IRCALTSDIEVAIITGRKAKL---VEDRCA---TLGITHLY--QGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVM 133 (188)
T ss_dssp HHHHHTTTCEEEEECSSCCHH---HHHHHH---HHTCCEEE--CSCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHH
T ss_pred HHHHHHCCCeEEEEeCCChHH---HHHHHH---HcCCceee--cCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 578899999999999998753 222222 34666443 222333555555544 464 689999953 33344
Q ss_pred chhccccc
Q 039912 112 RISYACFS 119 (198)
Q Consensus 112 R~AD~~fs 119 (198)
+.|.+.+-
T Consensus 134 ~~ag~~~~ 141 (188)
T 2r8e_A 134 EKVGLSVA 141 (188)
T ss_dssp TTSSEEEE
T ss_pred HHCCCEEE
Confidence 55555543
No 146
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=64.35 E-value=9.4 Score=28.29 Aligned_cols=77 Identities=13% Similarity=-0.028 Sum_probs=42.4
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEE---EEeCC----------cch----HH-HHHHHHhcC-
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLV---VVSDD----------SDF----VE-VLLEANLRC- 96 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clv---LVSDd----------sdF----~~-~Lr~Ar~r~- 96 (198)
+-..|+..|+.+-.||..|... ++. .+...|++.++ +.+++ ..+ .. +.+.+++.|
T Consensus 100 ~l~~l~~~g~~~~ivS~~~~~~---~~~---~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~ 173 (232)
T 3fvv_A 100 VVRGHLAAGDLCALVTATNSFV---TAP---IARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGL 173 (232)
T ss_dssp HHHHHHHTTCEEEEEESSCHHH---HHH---HHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCEEEEEeCCCHHH---HHH---HHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHcCC
Confidence 4556788999999999888633 112 12235666322 22222 122 12 334555566
Q ss_pred --C---cEEEEccCC-Cccccchhcccc
Q 039912 97 --L---KTVVVGDIN-DGALKRISYACF 118 (198)
Q Consensus 97 --l---~TVVVGd~~-~~~L~R~AD~~f 118 (198)
+ ++++|||+. |-...+.|+..+
T Consensus 174 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 201 (232)
T 3fvv_A 174 ALGDFAESYFYSDSVNDVPLLEAVTRPI 201 (232)
T ss_dssp CGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred CcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence 3 589999963 233445555444
No 147
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=63.69 E-value=2.6 Score=34.14 Aligned_cols=67 Identities=19% Similarity=0.175 Sum_probs=42.7
Q ss_pred hhHhhhcceEEEecCCC-cchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcE---EEEccC
Q 039912 37 IGELKRGGLWVRTASDK-PQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKT---VVVGDI 105 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdK-PqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~T---VVVGd~ 105 (198)
...|+++|.-|-....- +...| ....+..+.+.+.+.|++.++..+...+++.+++.|+.. ++.|+.
T Consensus 163 ~~~~~~~G~~v~~~~~~~~~~~d--~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (379)
T 3n0w_A 163 RRELTAGGGQIVGSVRFPFETQD--FSSYLLQAKASGAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGMI 233 (379)
T ss_dssp HHHHHHHTCEEEEEEEECTTCCC--CHHHHHHHHHHTCSEEEECCCHHHHHHHHHHHHHTTCSCSSCEEECCB
T ss_pred HHHHHHcCCEEEEEEeCCCCCCC--HHHHHHHHHHCCCCEEEEecccchHHHHHHHHHHcCCCCCCcEEEecc
Confidence 45677788776421111 11111 112333344568999999888889999999999999976 566654
No 148
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=63.65 E-value=11 Score=35.57 Aligned_cols=76 Identities=16% Similarity=0.103 Sum_probs=42.7
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC-CCccccchhcc
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI-NDGALKRISYA 116 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~ 116 (198)
..|+++|+.|-.++..+...=.++-+ ..|++.++.=.-..+=..+++.-+++ -.++.|||+ ||-..-+.||+
T Consensus 545 ~~l~~~Gi~v~~~TGd~~~~a~~ia~------~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~v 617 (723)
T 3j09_A 545 QELKRMGIKVGMITGDNWRSAEAISR------ELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADL 617 (723)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHHH------HHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSE
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHH------HcCCcEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCE
Confidence 45666666666666555433112211 34555444333334555666666665 568889995 55445567888
Q ss_pred cccH
Q 039912 117 CFSW 120 (198)
Q Consensus 117 ~fsW 120 (198)
++..
T Consensus 618 giam 621 (723)
T 3j09_A 618 GIAV 621 (723)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7653
No 149
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=63.28 E-value=5.3 Score=35.87 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=27.7
Q ss_pred HHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEE-Ecc
Q 039912 67 ITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVV-VGD 104 (198)
Q Consensus 67 ~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVV-VGd 104 (198)
.+-+.|+.+.+-..+. .|..-++.|.+.|.+.|| ||+
T Consensus 383 ~LR~~Gi~ve~~~~~~-slkkq~k~A~k~ga~~vviiGe 420 (456)
T 3lc0_A 383 RLRDAGRSADIILDKK-KVVQAFNYADRVGAVRAVLVAP 420 (456)
T ss_dssp HHHHTTCCEEECCSCC-CHHHHHHHHHHTTEEEEEEECH
T ss_pred HHHHCCCeEEEecCCC-CHHHHHHHHHHcCCCEEEEECC
Confidence 4556788876655544 499999999999998775 565
No 150
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=63.26 E-value=46 Score=26.13 Aligned_cols=66 Identities=17% Similarity=0.175 Sum_probs=44.6
Q ss_pred ceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCCccc
Q 039912 44 GLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGAL 110 (198)
Q Consensus 44 Gv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L 110 (198)
-+.|-.|.+.+. +...+.+-...+...|+..-+.+-..+-...+++.|++.+..-||+|-...+.+
T Consensus 200 ~l~ll~v~~~~~-~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dLlV~G~~~~~~~ 265 (294)
T 3loq_A 200 ELHIIHVSEDGD-KTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINATTIFMGSRGAGSV 265 (294)
T ss_dssp EEEEEEECSSSC-CHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTCSEEEEECCCCSCH
T ss_pred EEEEEEEccCch-HHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCcCEEEEeCCCCCCc
Confidence 456656666554 344555544455567887655555556678899999999999999998753333
No 151
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=62.00 E-value=18 Score=29.02 Aligned_cols=67 Identities=12% Similarity=0.065 Sum_probs=45.3
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|.+|.+.|..|-.+...+...-..+...+. ..|..+.++..|-++...+-+...+. .+..+|-
T Consensus 44 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 115 (271)
T 3v2g_A 44 GAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE---QAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVN 115 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 6678999999999998764444333334444443 45778888889988887765554432 6766664
No 152
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=61.42 E-value=24 Score=30.39 Aligned_cols=75 Identities=8% Similarity=0.051 Sum_probs=47.4
Q ss_pred hhhcc--eEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHH-HHh-cCCcEEEEccCCCccccchhc
Q 039912 40 LKRGG--LWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLE-ANL-RCLKTVVVGDINDGALKRISY 115 (198)
Q Consensus 40 LrRAG--v~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~-Ar~-r~l~TVVVGd~~~~~L~R~AD 115 (198)
.+.-| +.+..++..|..+|. .+.|..++++|++-|+++| ..|.+.+.. |.+ .+++.|+|.... ......-
T Consensus 54 ~~~~G~~~~~~~~e~~~~~~d~--~~~l~~l~~~g~d~Ii~~g--~~~~~~~~~vA~~~Pdv~fv~id~~~--~~~Nv~s 127 (356)
T 3s99_A 54 VEALGDKVETTFLENVAEGADA--ERSIKRIARAGNKLIFTTS--FGYMDPTVKVAKKFPDVKFEHATGYK--TADNMSA 127 (356)
T ss_dssp HHHHTTTEEEEEECSCCTTHHH--HHHHHHHHHTTCSEEEECS--GGGHHHHHHHHTTCTTSEEEEESCCC--CBTTEEE
T ss_pred HHHhCCceEEEEEecCCCHHHH--HHHHHHHHHCCCCEEEECC--HHHHHHHHHHHHHCCCCEEEEEeccc--cCCcEEE
Confidence 34457 888777777776653 5677788899999777765 556665554 555 478888885532 1233444
Q ss_pred ccccH
Q 039912 116 ACFSW 120 (198)
Q Consensus 116 ~~fsW 120 (198)
+.|.-
T Consensus 128 v~~~~ 132 (356)
T 3s99_A 128 YNARF 132 (356)
T ss_dssp EEECH
T ss_pred EEech
Confidence 44443
No 153
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=61.07 E-value=18 Score=29.18 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=45.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++.....+...+. ..|..+.++..|=++...+-+...+. .+..+|-
T Consensus 60 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 131 (291)
T 3ijr_A 60 GRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE---KEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVN 131 (291)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---TTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998765555433334444333 56788889988988877765555432 6666653
No 154
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=59.85 E-value=18 Score=28.45 Aligned_cols=67 Identities=12% Similarity=0.060 Sum_probs=44.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|.+|.+.|..|-.+.......-..+...+. ..+..+.++..|=++...+-+...+. .+..||-
T Consensus 39 G~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 110 (272)
T 4e3z_A 39 GAAVCRLAARQGWRVGVNYAANREAADAVVAAIT---ESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVN 110 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 6778999999999996653333322234444333 45778888888988887776665543 6776664
No 155
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=59.75 E-value=26 Score=26.61 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=15.4
Q ss_pred hhHhhhcceEEEecCCCcc
Q 039912 37 IGELKRGGLWVRTASDKPQ 55 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPq 55 (198)
-.+|+++|+.+-.+|..|.
T Consensus 59 L~~L~~~G~~~~ivTn~~~ 77 (211)
T 2gmw_A 59 MRELKKMGFALVVVTNQSG 77 (211)
T ss_dssp HHHHHHTTCEEEEEEECTH
T ss_pred HHHHHHCCCeEEEEECcCC
Confidence 4568888999998888884
No 156
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=59.52 E-value=30 Score=24.70 Aligned_cols=76 Identities=16% Similarity=0.040 Sum_probs=42.7
Q ss_pred chhHhhhcc-eEEEecCCCcchH-HHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc---EEEEccC--CCc
Q 039912 36 LIGELKRGG-LWVRTASDKPQAT-DVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK---TVVVGDI--NDG 108 (198)
Q Consensus 36 La~ELrRAG-v~VrtVsdKPqAA-D~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~---TVVVGd~--~~~ 108 (198)
+-..|++.| +.+-.++..|... ...|+. +. + ..-.+.+ +.+..+.=..+...++..|+. +++|||+ +|-
T Consensus 113 ~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~-~~-~-~~~f~~~-~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di 188 (234)
T 3ddh_A 113 TLKTLKETGKYKLVVATKGDLLDQENKLER-SG-L-SPYFDHI-EVMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSDI 188 (234)
T ss_dssp HHHHHHHHCCCEEEEEEESCHHHHHHHHHH-HT-C-GGGCSEE-EEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCC
T ss_pred HHHHHHhCCCeEEEEEeCCchHHHHHHHHH-hC-c-Hhhhhee-eecCCCCHHHHHHHHHHhCCCcceEEEECCCcHHHh
Confidence 456788999 8887777666532 222222 11 0 1123344 455556655555666667774 8999998 343
Q ss_pred cccchhc
Q 039912 109 ALKRISY 115 (198)
Q Consensus 109 ~L~R~AD 115 (198)
...+.|-
T Consensus 189 ~~a~~aG 195 (234)
T 3ddh_A 189 QPVLSLG 195 (234)
T ss_dssp HHHHHHT
T ss_pred HHHHHCC
Confidence 3334443
No 157
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=59.33 E-value=15 Score=28.51 Aligned_cols=67 Identities=9% Similarity=0.031 Sum_probs=45.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|.+|.+.|..|-.+...++..-..++.... ..+..+.++..|=++...+-+...+. .+..||-
T Consensus 20 G~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~ 91 (264)
T 3i4f_A 20 GKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK---DVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLIN 91 (264)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG---GGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEC
T ss_pred HHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH---hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 6778999999999998876666554444544332 44667788888888877766655543 6766653
No 158
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=59.32 E-value=55 Score=25.74 Aligned_cols=67 Identities=12% Similarity=0.098 Sum_probs=46.7
Q ss_pred eEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEe-CCcchHHHHHHHHhcCCcEEEEccCCCccccc
Q 039912 45 LWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVS-DDSDFVEVLLEANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 45 v~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVS-DdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
+.+-.|.+ |+.+...|.+....+...|+.+-..+. ..+-...+++.|++++..-||+|-...+.+.+
T Consensus 38 l~ll~v~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~~~~~~~ 105 (290)
T 3mt0_A 38 LHLLVCEK-RRDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKK 105 (290)
T ss_dssp EEEEEECS-SSCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCCSCTTST
T ss_pred EEEEEeeC-cHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEecccCCchhh
Confidence 33334433 576777777777766677888866665 45567888999999999999999764333443
No 159
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=59.24 E-value=15 Score=29.38 Aligned_cols=64 Identities=11% Similarity=-0.012 Sum_probs=41.3
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......... ...+.+..+..++++.|| .+-+.+. ..+++.++..|+++..
T Consensus 81 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI-~~~~~~~----~~l~~~~iPvV~~~~~ 144 (330)
T 3ctp_A 81 VIEEYAKNKGYTLFLCNTDDDKE--KEKTYLEVLQSHRVAGII-ASRSQCE----DEYANIDIPVVAFENH 144 (330)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEE-EETCCCS----GGGTTCCSCEEEESSC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEE-ECCCCCH----HHHHhcCCCEEEEecc
Confidence 66778889999887654332222 122334456688999999 7655432 2234688999999764
No 160
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, prote structure initiative; 2.00A {Clostridium difficile}
Probab=58.91 E-value=8.6 Score=28.91 Aligned_cols=72 Identities=13% Similarity=0.135 Sum_probs=46.8
Q ss_pred hhcceEEEecCCCcchHHHHHHHHHHHHh----h-cCccEEEEEe----------CCcchHHHHHHHHhcCCcEEEEccC
Q 039912 41 KRGGLWVRTASDKPQATDVLLRNHLVITH----K-RRIEYLVVVS----------DDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 41 rRAGv~VrtVsdKPqAAD~ALkrhm~~m~----~-~gv~clvLVS----------DdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
+|+-.|+|. |..-|..-..|.+|...+. + .|+.+.-..+ +.+.|..+|..++.-.+.+|||=+.
T Consensus 6 ~r~~~Y~Rv-St~~q~~~~sl~~Q~~~~~~~a~~~~g~~~~~~~~D~g~Sg~~~~~Rp~l~~ll~~~~~g~id~vvv~~l 84 (169)
T 3g13_A 6 LRVAAYCRV-STDSEDQLNSYKSQVQYYTDMIKKNKEWVLADIYADEAITGTQVTKREDFQRMINDCMNGEIDMVFTKSI 84 (169)
T ss_dssp EEEEEEEEE-CSCSSCGGGSHHHHHHHHHHHHHTCTTEEEEEEEEEEC------CCSHHHHHHHHHHHTTCCSEEEESCH
T ss_pred eEEEEEEEE-CCCccccccCHHHHHHHHHHHHHHCCCCeEEEEEeeCCccCCCcCCCHHHHHHHHHHHcCCCcEEEEEec
Confidence 577888887 4444533335777766332 2 3666543333 3467889999999988899999886
Q ss_pred CCccccchhc
Q 039912 106 NDGALKRISY 115 (198)
Q Consensus 106 ~~~~L~R~AD 115 (198)
+ -|+|..-
T Consensus 85 d--Rl~R~~~ 92 (169)
T 3g13_A 85 S--RFARNTL 92 (169)
T ss_dssp H--HHCSSHH
T ss_pred c--ccccChH
Confidence 5 3777543
No 161
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=58.76 E-value=26 Score=26.55 Aligned_cols=75 Identities=13% Similarity=-0.017 Sum_probs=43.0
Q ss_pred hhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC---cEEEEccCC-Cccccc
Q 039912 37 IGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL---KTVVVGDIN-DGALKR 112 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l---~TVVVGd~~-~~~L~R 112 (198)
-..|+++|+.+-.+|..|... +... +...|++.++-.. -+.-..+.+.+++.++ .+++|||+. |-...+
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~---~~~~---l~~lgl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~ 127 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAV---VDHR---MEQLGITHYYKGQ-VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQ 127 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHH---HHHH---HHHHTCCEEECSC-SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHCCCeEEEEeCcChHH---HHHH---HHHcCCccceeCC-CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence 567899999999999888743 2221 2234666533221 2233334444455566 599999953 333444
Q ss_pred hhcccc
Q 039912 113 ISYACF 118 (198)
Q Consensus 113 ~AD~~f 118 (198)
.|.+.+
T Consensus 128 ~ag~~~ 133 (191)
T 3n1u_A 128 QVGLGV 133 (191)
T ss_dssp HSSEEE
T ss_pred HCCCEE
Confidence 454443
No 162
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=58.68 E-value=17 Score=27.09 Aligned_cols=39 Identities=8% Similarity=0.151 Sum_probs=28.5
Q ss_pred HHHHHhhcC-ccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 64 HLVITHKRR-IEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 64 hm~~m~~~g-v~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.+.++.+.| |+.+++.|.. +|.++ .++.+++.||+|...
T Consensus 56 R~~~l~~~~~vd~v~~~~~~-~f~~~---~~~l~~~~iv~G~d~ 95 (143)
T 3glv_A 56 RLALISELKVVDRAILGHEG-DMMKT---VIEVKPDIITLGYDQ 95 (143)
T ss_dssp HHHHHTTBTTCSEEEECCTT-CHHHH---HHHHCCSEEEECTTC
T ss_pred HHHHHHhcCCCCEEEEcCch-hHHHH---HHhcCCCEEEECCCC
Confidence 344444566 9998887665 58874 467899999999864
No 163
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=58.61 E-value=12 Score=29.74 Aligned_cols=61 Identities=15% Similarity=0.109 Sum_probs=43.2
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcE
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKT 99 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~T 99 (198)
.++.+.|+-|.... .+...+.-....+..+.+.+.+.||+.+...+...+|+.|++.|+.+
T Consensus 151 ~~~~~~g~~v~~~~-~~~~~~~d~~~~l~~i~~~~~~vIv~~~~~~~~~~il~~a~~~g~~~ 211 (389)
T 4gpa_A 151 EKAGQNGWHVSAIC-VENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHV 211 (389)
T ss_dssp HHHHTTTCEEEEEE-CTTCCHHHHHHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHTCSB
T ss_pred HHHHhcCceEEEEe-ecCCcchhHHHHHHHhhccCCcEEEEEechhHHHHHHHHHHHhCCCC
Confidence 35666777775432 22223334555556666778999999999999999999999988753
No 164
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=58.25 E-value=24 Score=27.41 Aligned_cols=66 Identities=14% Similarity=0.151 Sum_probs=43.2
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..+|..|.+.|..|-.+...++..-..+...+. ..|.++.++..|=++...+-+...+. ++..+|
T Consensus 17 G~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv 87 (246)
T 3osu_A 17 GRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK---AKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLV 87 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 6678899999999997654433322223444333 45778888888888887766655542 666655
No 165
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=58.10 E-value=8.8 Score=35.23 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=35.5
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcC-CcEEEEccCCCccccchhcccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRC-LKTVVVGDINDGALKRISYACF 118 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~-l~TVVVGd~~~~~L~R~AD~~f 118 (198)
+.+|.+|-. .+-..+++.|+++| ++||.|=+..++.|.+.||..+
T Consensus 341 dlvI~iS~SG~T~e~l~a~~~ak~~G~a~~IaIT~~~~S~La~~ad~~l 389 (608)
T 2bpl_A 341 SLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLAL 389 (608)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCSEEEEEESSTTCHHHHHSSEEE
T ss_pred CEEEEEeCCcCCHHHHHHHHHHHHcCCCeEEEEECCCCCHHHHhcCEEE
Confidence 445666643 45677889999999 9999998876789999999765
No 166
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=57.82 E-value=6.9 Score=28.41 Aligned_cols=80 Identities=20% Similarity=0.130 Sum_probs=43.1
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE---EEE----------EeCC----cchHHHHHHH-HhcC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY---LVV----------VSDD----SDFVEVLLEA-NLRC 96 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c---lvL----------VSDd----sdF~~~Lr~A-r~r~ 96 (198)
.+-..|++.|+.+-.+|..|... +..-+. ..|+.. .++ +|++ ..=..+++.+ ++.|
T Consensus 82 ~~l~~l~~~g~~~~i~S~~~~~~---~~~~l~---~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~~g 155 (217)
T 3m1y_A 82 ELVSALKEKNYKVVCFSGGFDLA---TNHYRD---LLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLLN 155 (217)
T ss_dssp HHHHHHHTTTEEEEEEEEEEHHH---HHHHHH---HHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEcCCchhH---HHHHHH---HcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHHcC
Confidence 45678899999999999877633 111111 235542 222 1221 1123444444 4456
Q ss_pred C---cEEEEccCC-CccccchhcccccH
Q 039912 97 L---KTVVVGDIN-DGALKRISYACFSW 120 (198)
Q Consensus 97 l---~TVVVGd~~-~~~L~R~AD~~fsW 120 (198)
+ .+++|||+. |-...+.|.+.+-|
T Consensus 156 ~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 156 ISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp CCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred CCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 5 689999964 23344555555433
No 167
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=57.65 E-value=53 Score=27.30 Aligned_cols=63 Identities=10% Similarity=0.047 Sum_probs=41.7
Q ss_pred hHhhhcceEEEecC-----CCcchHHHHHHHHHHHHhhcCccEEEEEeCC-cchHHHH-HHHHhcCCcEEEE
Q 039912 38 GELKRGGLWVRTAS-----DKPQATDVLLRNHLVITHKRRIEYLVVVSDD-SDFVEVL-LEANLRCLKTVVV 102 (198)
Q Consensus 38 ~ELrRAGv~VrtVs-----dKPqAAD~ALkrhm~~m~~~gv~clvLVSDd-sdF~~~L-r~Ar~r~l~TVVV 102 (198)
--.+|.|+.+..+. ..|.+++.+ +=+..+.+.+|.||+.=+-- +..++.| +.|++.|++.+++
T Consensus 175 Y~~~~yGl~~~~~~~~~~~~eps~~~l~--~l~~~ik~~~v~~if~e~~~~~~~~~~l~~~a~~~g~~v~~l 244 (282)
T 3mfq_A 175 YFAASYDFTLYAPQGVSTDSEVANSDMI--ETVNLIIDHNIKAIFTESTTNPERMKKLQEAVKAKGGQVEVV 244 (282)
T ss_dssp HHHHHTTCEEECSSCSSSCSCCCHHHHH--HHHHHHHHHTCCEEECBTTSCTHHHHHHHHHHHTTSCCCEEE
T ss_pred HHHHHCCCeEecccccCCCCCCCHHHHH--HHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHHhcCCceEEe
Confidence 45688899887543 347777543 32234447899999864433 3356655 4689999998887
No 168
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=57.61 E-value=7.8 Score=33.32 Aligned_cols=71 Identities=17% Similarity=0.056 Sum_probs=46.7
Q ss_pred Hhhh-cceEEEecCCCcchHHHHHHHHHHHHhh-cCccEEEEEeCC---cchHHHHHHHHhc--CCcEEEEccCCCcccc
Q 039912 39 ELKR-GGLWVRTASDKPQATDVLLRNHLVITHK-RRIEYLVVVSDD---SDFVEVLLEANLR--CLKTVVVGDINDGALK 111 (198)
Q Consensus 39 ELrR-AGv~VrtVsdKPqAAD~ALkrhm~~m~~-~gv~clvLVSDd---sdF~~~Lr~Ar~r--~l~TVVVGd~~~~~L~ 111 (198)
-|.| .|+.|..+.+ + + .+-... .+.. ..=+.+|.+|-. .+-..+++.|+++ |++||.|-+..++.|.
T Consensus 74 ~l~~~~g~~v~~~~~-~---~-~~~~~~-~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~~S~La 147 (384)
T 3c3j_A 74 WLASHTGKNFSAVPT-T---D-LVTNPM-DYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALY 147 (384)
T ss_dssp HHHHHHCSEEEECCH-H---H-HHHCHH-HHCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHH
T ss_pred HHHHHhCCcEEEecc-H---H-HHhChh-hhhCCCCCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCCCCHHH
Confidence 4555 7988887653 1 1 111111 1111 133567777753 4567778899998 9999999987778999
Q ss_pred chhc
Q 039912 112 RISY 115 (198)
Q Consensus 112 R~AD 115 (198)
|.||
T Consensus 148 ~~ad 151 (384)
T 3c3j_A 148 QNAI 151 (384)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 9999
No 169
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=57.31 E-value=24 Score=27.84 Aligned_cols=66 Identities=14% Similarity=0.080 Sum_probs=44.2
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..+|..|.+.|..|-.+...++..-..+...+. ..|..+.++..|-++...+-+...+. .+..+|
T Consensus 31 G~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 101 (270)
T 3is3_A 31 GAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK---ALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAV 101 (270)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 6668899999999998654444332234444443 45788888889988887776665543 565555
No 170
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=57.19 E-value=6.1 Score=34.19 Aligned_cols=42 Identities=21% Similarity=0.397 Sum_probs=0.0
Q ss_pred chhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCC
Q 039912 36 LIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDD 82 (198)
Q Consensus 36 La~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd 82 (198)
|+.+||.+|+.|.+. ...|. ++++|...+..|+.++|+|-++
T Consensus 385 l~~~Lr~~Gi~ve~~~~~~~~-----l~~q~k~A~~~g~~~~viiG~~ 427 (464)
T 4g84_A 385 LVSELWDAGIKAELLYKKNPK-----LLNQLQYCEEAGIPLVAIIGEQ 427 (464)
T ss_dssp HHHHHHHTTCCEECCSCSSCC-----HHHHHHHHHHHTCCEEEECCHH
T ss_pred HHHHHHHCCCcEEEEeCCCCC-----HHHHHHHHHHCCCCEEEEECch
No 171
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=56.67 E-value=9.1 Score=32.09 Aligned_cols=62 Identities=11% Similarity=-0.076 Sum_probs=39.0
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.......+. +.+..+.+++++.||+...+ .++++.+++.++..|+|+..
T Consensus 45 gi~~~a~~~g~~~~i~~~~~~~------~~i~~l~~~~vDGiIi~~~~---~~~~~~l~~~~iPvV~i~~~ 106 (412)
T 4fe7_A 45 GVGEYLQASQSEWDIFIEEDFR------ARIDKIKDWLGDGVIADFDD---KQIEQALADVDVPIVGVGGS 106 (412)
T ss_dssp HHHHHHHHHTCCEEEEECC-CC--------------CCCSEEEEETTC---HHHHHHHTTCCSCEEEEEEC
T ss_pred HHHHHHHhcCCCeEEEecCCcc------chhhhHhcCCCCEEEEecCC---hHHHHHHhhCCCCEEEecCC
Confidence 6677888888877654422221 12445668899999985433 46788888999999999864
No 172
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=56.60 E-value=7.6 Score=30.77 Aligned_cols=70 Identities=10% Similarity=0.098 Sum_probs=45.2
Q ss_pred CCCchhHhhhcceEEEecCCCcch----------HHHHHHHHHHHHhhcCccEEEEEeCCcch--------------HHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQA----------TDVLLRNHLVITHKRRIEYLVVVSDDSDF--------------VEV 88 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqA----------AD~ALkrhm~~m~~~gv~clvLVSDdsdF--------------~~~ 88 (198)
|.-|+..|.+.|..|..+...|.. .|.. ...+..+.. +++.||-....... ..+
T Consensus 15 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l 92 (311)
T 3m2p_A 15 GQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLN-DVDAVVHLAATRGSQGKISEFHDNEILTQNL 92 (311)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTT-TCSEEEECCCCCCSSSCGGGTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhc-CCCEEEEccccCCCCChHHHHHHHHHHHHHH
Confidence 556888999999998866554443 2333 333443323 89998876544322 578
Q ss_pred HHHHHhcCCcEEE-Ecc
Q 039912 89 LLEANLRCLKTVV-VGD 104 (198)
Q Consensus 89 Lr~Ar~r~l~TVV-VGd 104 (198)
++.|++.+++.+| ++-
T Consensus 93 l~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 93 YDACYENNISNIVYAST 109 (311)
T ss_dssp HHHHHHTTCCEEEEEEE
T ss_pred HHHHHHcCCCEEEEEcc
Confidence 8999999998555 443
No 173
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=56.55 E-value=16 Score=30.56 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=22.8
Q ss_pred hcCccEEEEEeCCcchHHHHHHH--HhcCCcEEEEccCCCccccch
Q 039912 70 KRRIEYLVVVSDDSDFVEVLLEA--NLRCLKTVVVGDINDGALKRI 113 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF~~~Lr~A--r~r~l~TVVVGd~~~~~L~R~ 113 (198)
..+.++||.+.-|=-+..+++.. +..++.-.+|-=++...|.|.
T Consensus 78 ~~~~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~GT~N~lAr~ 123 (337)
T 2qv7_A 78 HENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRA 123 (337)
T ss_dssp TTTCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHH
T ss_pred hcCCCEEEEEcCchHHHHHHHHHHhCCCCCcEEEecCCcHhHHHHH
Confidence 44566666666666666666666 333333333333333345554
No 174
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=56.46 E-value=29 Score=24.50 Aligned_cols=53 Identities=9% Similarity=-0.013 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhcCcc-EE-EEEeCCcchHHHHHH-HHhcCCcEEEEccCCCcccc
Q 039912 59 VLLRNHLVITHKRRIE-YL-VVVSDDSDFVEVLLE-ANLRCLKTVVVGDINDGALK 111 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv~-cl-vLVSDdsdF~~~Lr~-Ar~r~l~TVVVGd~~~~~L~ 111 (198)
..|.+....+...|+. +- .++.+.+-...+++. |++.+..-||+|-...+.++
T Consensus 79 ~~l~~~~~~~~~~g~~~~~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~ 134 (156)
T 3fg9_A 79 DVVAEYVQLAEQRGVNQVEPLVYEGGDVDDVILEQVIPEFKPDLLVTGADTEFPHS 134 (156)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHTHHHHHCCSEEEEETTCCCTTS
T ss_pred HHHHHHHHHHHHcCCCceEEEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCCCccc
Confidence 3444433344456773 42 333324556788888 99999999999986544443
No 175
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=56.43 E-value=58 Score=24.89 Aligned_cols=41 Identities=27% Similarity=0.237 Sum_probs=23.6
Q ss_pred hhHHHHHHHHhccCCCCCCC---chhHhhhcceEEEecCCCcch
Q 039912 16 KMEKYKRAARAVLTPEVGNG---LIGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 16 K~~KY~~AAr~lltPkvgyG---La~ELrRAGv~VrtVsdKPqA 56 (198)
++..|....++......--| +-..|++.|+.+=+++..+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~~ 123 (243)
T 4g9b_A 80 KNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNA 123 (243)
T ss_dssp HHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTTH
T ss_pred HHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccch
Confidence 34445555555433333223 445778889888887776653
No 176
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=56.24 E-value=35 Score=24.74 Aligned_cols=50 Identities=16% Similarity=0.038 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhhcCccEE--EEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 57 TDVLLRNHLVITHKRRIEYL--VVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 57 AD~ALkrhm~~m~~~gv~cl--vLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
+...|.+....+...|+++- +.+...+-...|++.|++.+..-||+|-..
T Consensus 76 ~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g 127 (155)
T 3dlo_A 76 AKETLSWAVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRK 127 (155)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCE
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCC
Confidence 33445554445556677663 445555567889999999999999999754
No 177
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=55.50 E-value=5.8 Score=29.51 Aligned_cols=62 Identities=11% Similarity=0.062 Sum_probs=38.5
Q ss_pred CchhHhhhc-ceEEEecCCCcchHHHHHHHHH----------HHHhh----cCccEEEEEeC-CcchHHHHHHHHhcC
Q 039912 35 GLIGELKRG-GLWVRTASDKPQATDVLLRNHL----------VITHK----RRIEYLVVVSD-DSDFVEVLLEANLRC 96 (198)
Q Consensus 35 GLa~ELrRA-Gv~VrtVsdKPqAAD~ALkrhm----------~~m~~----~gv~clvLVSD-dsdF~~~Lr~Ar~r~ 96 (198)
.+|..|++. |+.|..+...|+..+.+..... ..+.. .+.+.+|+.+. +.....++..++..+
T Consensus 53 ~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 53 GAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp HHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 368899999 9999988887876654432111 11212 25567776444 444556677888866
No 178
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=55.29 E-value=29 Score=31.06 Aligned_cols=69 Identities=12% Similarity=0.121 Sum_probs=42.5
Q ss_pred hhHhhhcceEEEecCCCcchH-HHHHHHHHHH-HhhcCccEEEEEeCCcchHHHHHHHHhcCC---cEEEEccCC
Q 039912 37 IGELKRGGLWVRTASDKPQAT-DVLLRNHLVI-THKRRIEYLVVVSDDSDFVEVLLEANLRCL---KTVVVGDIN 106 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAA-D~ALkrhm~~-m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l---~TVVVGd~~ 106 (198)
-..|+++|+.+=.+|.+|... ...|++|-.+ +...++..++ +.-.+.-..+++.+++-|+ .+|+|||..
T Consensus 265 L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~-~~~KPKp~~l~~al~~Lgl~pee~v~VGDs~ 338 (387)
T 3nvb_A 265 VKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFV-ANWENKADNIRTIQRTLNIGFDSMVFLDDNP 338 (387)
T ss_dssp HHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEE-EESSCHHHHHHHHHHHHTCCGGGEEEECSCH
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCccCccEEE-eCCCCcHHHHHHHHHHhCcCcccEEEECCCH
Confidence 478999999999999999743 2223222000 1123555543 3334444555666666787 699999963
No 179
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=54.90 E-value=19 Score=26.37 Aligned_cols=66 Identities=20% Similarity=0.260 Sum_probs=37.8
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc---EEEEEeCCcch-----HHHHHHHHhcCC----cEEEE
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE---YLVVVSDDSDF-----VEVLLEANLRCL----KTVVV 102 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~---clvLVSDdsdF-----~~~Lr~Ar~r~l----~TVVV 102 (198)
.+-..|+..|+.+-.++..|... +...+. ..|+. -.++.|++... ..+.+.+++.|+ .+++|
T Consensus 110 ~~l~~l~~~g~~~~i~T~~~~~~---~~~~l~---~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~v 183 (231)
T 3kzx_A 110 ELLDTLKENNITMAIVSNKNGER---LRSEIH---HKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFI 183 (231)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHH---HHHHHH---HTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEE
T ss_pred HHHHHHHHCCCeEEEEECCCHHH---HHHHHH---HCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEE
Confidence 34567888999998888876532 122111 33443 24445554332 234445555666 68899
Q ss_pred ccCC
Q 039912 103 GDIN 106 (198)
Q Consensus 103 Gd~~ 106 (198)
||+.
T Consensus 184 GD~~ 187 (231)
T 3kzx_A 184 GDSI 187 (231)
T ss_dssp ESSH
T ss_pred cCCH
Confidence 9963
No 180
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=54.32 E-value=45 Score=24.23 Aligned_cols=81 Identities=21% Similarity=0.185 Sum_probs=43.1
Q ss_pred HHHHHHHhccCCCCC-CCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE---EEEEeCCcch-----HHHH
Q 039912 19 KYKRAARAVLTPEVG-NGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY---LVVVSDDSDF-----VEVL 89 (198)
Q Consensus 19 KY~~AAr~lltPkvg-yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c---lvLVSDdsdF-----~~~L 89 (198)
.|.....+...|--| ..+-..|++.|+.+-.+|..|...=..+.+ ..|+.. .++.|++... .-++
T Consensus 74 ~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~------~~~l~~~fd~~~~~~~~~~~KP~p~~~~ 147 (216)
T 3kbb_A 74 EKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLR------RLDLEKYFDVMVFGDQVKNGKPDPEIYL 147 (216)
T ss_dssp HHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH------HTTCGGGCSEEECGGGSSSCTTSTHHHH
T ss_pred HHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHH------hcCCCccccccccccccCCCcccHHHHH
Confidence 344444455444332 245667889999999999988743111111 234332 3445554332 1233
Q ss_pred HHHHhcCC---cEEEEccC
Q 039912 90 LEANLRCL---KTVVVGDI 105 (198)
Q Consensus 90 r~Ar~r~l---~TVVVGd~ 105 (198)
..+++-|+ ++|+|||+
T Consensus 148 ~a~~~lg~~p~e~l~VgDs 166 (216)
T 3kbb_A 148 LVLERLNVVPEKVVVFEDS 166 (216)
T ss_dssp HHHHHHTCCGGGEEEEECS
T ss_pred HHHHhhCCCccceEEEecC
Confidence 33344555 47888885
No 181
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=54.25 E-value=54 Score=23.24 Aligned_cols=75 Identities=17% Similarity=0.084 Sum_probs=41.2
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHH-HHHHhcCC---cEEEEccCC-Cccc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVL-LEANLRCL---KTVVVGDIN-DGAL 110 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~L-r~Ar~r~l---~TVVVGd~~-~~~L 110 (198)
+-..|++.|+.+-.+|..|... ++..+ ...|++.++-. ...-..++ +.+++.++ ++++|||+. |-..
T Consensus 44 ~l~~l~~~g~~~~i~T~~~~~~---~~~~l---~~~gl~~~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~ 115 (162)
T 2p9j_A 44 GIKLLQKMGITLAVISGRDSAP---LITRL---KELGVEEIYTG--SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEV 115 (162)
T ss_dssp HHHHHHTTTCEEEEEESCCCHH---HHHHH---HHTTCCEEEEC--C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCEEEEEeCCCcHH---HHHHH---HHcCCHhhccC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence 4567889999999889888643 22222 23466654422 22223333 34455666 589999953 2223
Q ss_pred cchhcccc
Q 039912 111 KRISYACF 118 (198)
Q Consensus 111 ~R~AD~~f 118 (198)
.+.|.+.+
T Consensus 116 a~~ag~~~ 123 (162)
T 2p9j_A 116 MKKVGFPV 123 (162)
T ss_dssp HHHSSEEE
T ss_pred HHHCCCeE
Confidence 44444433
No 182
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=54.11 E-value=13 Score=31.48 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=31.5
Q ss_pred cCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCC
Q 039912 71 RRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIND 107 (198)
Q Consensus 71 ~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~ 107 (198)
.....|++++-.....-++|.|++.|+++|+|-+..+
T Consensus 3 ~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~ 39 (425)
T 3vot_A 3 KRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAE 39 (425)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTS
T ss_pred CCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCc
Confidence 3456789999999999999999999999999976543
No 183
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=53.79 E-value=9.1 Score=34.27 Aligned_cols=42 Identities=21% Similarity=0.397 Sum_probs=0.0
Q ss_pred chhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCC
Q 039912 36 LIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDD 82 (198)
Q Consensus 36 La~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd 82 (198)
|+.+||.+|+.|.+. ...|. +++||...+..|+.++|+|-++
T Consensus 438 l~~~Lr~~Gi~ve~~~~~~~~-----l~~q~k~A~~~g~~~~viiG~~ 480 (517)
T 4g85_A 438 LVSELWDAGIKAELLYKKNPK-----LLNQLQYCEEAGIPLVAIIGEQ 480 (517)
T ss_dssp HHHHHHHTTCCEEECSSSSCC-----HHHHHHHHHHHCCCEEEEECHH
T ss_pred HHHHHHHCCCcEEEEeCCCCC-----HHHHHHHHHHCCCCEEEEECCh
No 184
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=53.65 E-value=30 Score=27.27 Aligned_cols=66 Identities=15% Similarity=0.099 Sum_probs=43.9
Q ss_pred CCCchhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+ ...+..+ ..+...+. ..|..+.++..|=++...+-+...+. .+..||-
T Consensus 17 G~aia~~l~~~G~~vv~~~~r~~~~~-~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (258)
T 3oid_A 17 GKAAAIRLAENGYNIVINYARSKKAA-LETAEEIE---KLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVN 88 (258)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHH---TTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999998875 3333333 33444333 55778888888888887766655543 5665553
No 185
>3ilx_A First ORF in transposon ISC1904; sulfolobus solfataricus P2, structural G PSI-2, protein structure initiative; 2.00A {Sulfolobus solfataricus} PDB: 3lhf_A
Probab=53.48 E-value=10 Score=28.62 Aligned_cols=69 Identities=20% Similarity=0.233 Sum_probs=46.4
Q ss_pred hhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEe--------CCcchHHHHHHHHhcCCcEEEEccCCCccccc
Q 039912 41 KRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVS--------DDSDFVEVLLEANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 41 rRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVS--------DdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
+|+-.|+|. |..-|+. .|.+|+..+.....+|-+..+ +.+.|..||..++.-.+.+|||=+.+ -|+|
T Consensus 3 ~r~~~Y~Rv-St~~Q~~--sl~~Q~~~l~~~~~g~~~i~~D~~SG~~~~Rp~l~~ll~~~~~g~id~vvv~~ld--RL~R 77 (143)
T 3ilx_A 3 AKVILYARV-SSNTQKD--DLANQVKYLEEQVKEYDLVITDIGSGLNMKRKGFLKLLRMILNNEVSRVITAYPD--RLVR 77 (143)
T ss_dssp CEEEEEEEE-SCCC-CT--HHHHHHHHHHHHCSCCSEEEEEESCTTCTTCHHHHHHHHHHHTTCEEEEEESSHH--HHCS
T ss_pred CEEEEEEEE-Cchhhhh--cHHHHHHHHHHHhCCCeEEEEcCcccccCCcHHHHHHHHHHHhCCCCEEEEEeCC--cccc
Confidence 467778886 5555654 788887755433223322333 45789999999999989999998875 3777
Q ss_pred hh
Q 039912 113 IS 114 (198)
Q Consensus 113 ~A 114 (198)
..
T Consensus 78 ~~ 79 (143)
T 3ilx_A 78 FG 79 (143)
T ss_dssp SC
T ss_pred cH
Confidence 53
No 186
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=53.05 E-value=11 Score=28.24 Aligned_cols=44 Identities=18% Similarity=0.038 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 60 LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
+....+..+...|+..+++- -...-.++++.|++.|++ +||+.|
T Consensus 82 ~~~~v~~~~~~~gi~~i~~~-~g~~~~~~~~~a~~~Gir--~vgpnc 125 (140)
T 1iuk_A 82 ALMDHLPEVLALRPGLVWLQ-SGIRHPEFEKALKEAGIP--VVADRC 125 (140)
T ss_dssp HHTTTHHHHHHHCCSCEEEC-TTCCCHHHHHHHHHTTCC--EEESCC
T ss_pred HHHHHHHHHHHcCCCEEEEc-CCcCHHHHHHHHHHcCCE--EEcCCc
Confidence 33444444557788876544 344457888999999987 678776
No 187
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=52.86 E-value=52 Score=24.23 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=44.4
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHH-HhcCC---cEEEEccCC-Cccc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEA-NLRCL---KTVVVGDIN-DGAL 110 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~A-r~r~l---~TVVVGd~~-~~~L 110 (198)
+-.+|+++|+.+-.+|..|... +... +...|++..+ .....=..+++.+ ++.++ .++.|||+. |-..
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~~---~~~~---~~~lgl~~~~--~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~ 114 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSPI---LRRR---IADLGIKLFF--LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPA 114 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCHH---HHHH---HHHHTCCEEE--ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCeEEEEeCCCcHH---HHHH---HHHcCCceee--cCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence 4567899999999999888743 1221 1234676644 2233335555544 44464 689999953 3334
Q ss_pred cchhccccc
Q 039912 111 KRISYACFS 119 (198)
Q Consensus 111 ~R~AD~~fs 119 (198)
.+.|.+.+-
T Consensus 115 ~~~ag~~~~ 123 (180)
T 1k1e_A 115 FAACGTSFA 123 (180)
T ss_dssp HHHSSEEEE
T ss_pred HHHcCCeEE
Confidence 455555543
No 188
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=52.65 E-value=33 Score=26.74 Aligned_cols=62 Identities=8% Similarity=-0.050 Sum_probs=36.2
Q ss_pred hhHhhhcceEEEecC--------CCcchHHHHHHHHHHHHhhcCccEEEEEeCCc---------------chHHHHHHHH
Q 039912 37 IGELKRGGLWVRTAS--------DKPQATDVLLRNHLVITHKRRIEYLVVVSDDS---------------DFVEVLLEAN 93 (198)
Q Consensus 37 a~ELrRAGv~VrtVs--------dKPqAAD~ALkrhm~~m~~~gv~clvLVSDds---------------dF~~~Lr~Ar 93 (198)
...|++.|+.+-.++ +.++++-..+++.+......|+.+|++.+-.. .|..+.+.|+
T Consensus 54 ~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~ 133 (286)
T 3dx5_A 54 LNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFA 133 (286)
T ss_dssp HHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHH
Confidence 345556666665432 12234445666777766678888887765431 1445666777
Q ss_pred hcCCc
Q 039912 94 LRCLK 98 (198)
Q Consensus 94 ~r~l~ 98 (198)
+.|++
T Consensus 134 ~~Gv~ 138 (286)
T 3dx5_A 134 QHNMY 138 (286)
T ss_dssp HTTCE
T ss_pred HhCCE
Confidence 77873
No 189
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=52.53 E-value=23 Score=27.35 Aligned_cols=66 Identities=11% Similarity=0.135 Sum_probs=41.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..+|.+|.+.|..|-.+..........+...+. ..+.++.++..|=++...+-+...+. .+..||
T Consensus 26 G~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 96 (256)
T 3ezl_A 26 GTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK---ALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLV 96 (256)
T ss_dssp HHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH---HTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---hcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6778999999999997654333322223333333 45778888888888877665555442 555544
No 190
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=52.39 E-value=1.3 Score=34.27 Aligned_cols=68 Identities=12% Similarity=0.119 Sum_probs=42.7
Q ss_pred CCchhHhhhcceEEEecC--CCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 34 NGLIGELKRGGLWVRTAS--DKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVs--dKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|+..++++.|+.+.... ..++.. .+.+..+.+++++.||+.+-+..-..++ .+.+.++..|+++...
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~~~~~~----~~~~~~l~~~~vdgiIi~~~~~~~~~~~-~~~~~~iPvV~~~~~~ 101 (289)
T 3g85_A 32 RGLQSKLAKQNYNYNVVICPYKTDCL----HLEKGISKENSFDAAIIANISNYDLEYL-NKASLTLPIILFNRLS 101 (289)
T ss_dssp HHHHHHHHHTTTCSEEEEEEECTTCG----GGCGGGSTTTCCSEEEESSCCHHHHHHH-HHCCCSSCEEEESCCC
T ss_pred HHHHHHHHHcCCeEEEEecCCCchhH----HHHHHHHhccCCCEEEEecCCcccHHHH-HhccCCCCEEEECCCC
Confidence 356677888888765432 122211 1223356688999999988665443343 4457899999998753
No 191
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=52.31 E-value=28 Score=26.74 Aligned_cols=67 Identities=21% Similarity=0.165 Sum_probs=46.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEEc
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVVG 103 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVVG 103 (198)
|..+|..|.+.|..|-.+...+...+. +...+. ..+..+.++..|=++...+-+...+. ++..||--
T Consensus 22 G~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 93 (253)
T 3qiv_A 22 GQAYAEALAREGAAVVVADINAEAAEA-VAKQIV---ADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNN 93 (253)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHH---HTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHH---hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 677899999999999876655554433 333333 45777888888888887776665543 77777653
No 192
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=52.25 E-value=14 Score=32.47 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=34.6
Q ss_pred ccEEEEEeCCcc---hHHHHHHHHhc--CCcEEEEccCCCccccchhc
Q 039912 73 IEYLVVVSDDSD---FVEVLLEANLR--CLKTVVVGDINDGALKRISY 115 (198)
Q Consensus 73 v~clvLVSDdsd---F~~~Lr~Ar~r--~l~TVVVGd~~~~~L~R~AD 115 (198)
=+++|.+|-.=. -..+++.|+++ |.+||.|-...++.|.|.||
T Consensus 109 ~dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD 156 (393)
T 3odp_A 109 PTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAK 156 (393)
T ss_dssp CEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGG
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhc
Confidence 356777886644 45556999999 99999999877789999999
No 193
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=51.90 E-value=56 Score=25.41 Aligned_cols=65 Identities=14% Similarity=0.047 Sum_probs=41.4
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC----cchHHHHHHHHhcCC---cEEEEccC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD----SDFVEVLLEANLRCL---KTVVVGDI 105 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd----sdF~~~Lr~Ar~r~l---~TVVVGd~ 105 (198)
++.-|+.+|+.|...- ...-. ..+..... ..+.+.|+|-+-. ..+..+++..|++++ -.|+||..
T Consensus 108 va~~l~~~G~~v~~LG-~~vp~-~~l~~~~~---~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 108 VAMMLESGGFTVYNLG-VDIEP-GKFVEAVK---KYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHHHTTCEEEECC-SSBCH-HHHHHHHH---HHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHHHCCCEEEECC-CCCCH-HHHHHHHH---HcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 4678999999998533 22222 23334333 4578887776632 246677888888886 36788875
No 194
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=51.83 E-value=33 Score=25.55 Aligned_cols=75 Identities=15% Similarity=0.089 Sum_probs=43.1
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE---EEEEeCCcch-----HHHHHHHHhcCC---cEEEEcc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY---LVVVSDDSDF-----VEVLLEANLRCL---KTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c---lvLVSDdsdF-----~~~Lr~Ar~r~l---~TVVVGd 104 (198)
+-..|+..|+.+-.++..+... ....+. ..|+.. .++.|++... ..+.+.+++.|+ .+++|||
T Consensus 102 ~l~~l~~~g~~~~i~t~~~~~~---~~~~l~---~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD 175 (241)
T 2hoq_A 102 VLIRLKELGYELGIITDGNPVK---QWEKIL---RLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGD 175 (241)
T ss_dssp HHHHHHHHTCEEEEEECSCHHH---HHHHHH---HTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHCCCEEEEEECCCchh---HHHHHH---HcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECC
Confidence 4567888999988888877532 112122 234432 3445554321 233444555676 5899999
Q ss_pred C--CCccccchhcc
Q 039912 105 I--NDGALKRISYA 116 (198)
Q Consensus 105 ~--~~~~L~R~AD~ 116 (198)
+ +|-...+.|.+
T Consensus 176 ~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 176 RLYSDIYGAKRVGM 189 (241)
T ss_dssp CTTTTHHHHHHTTC
T ss_pred CchHhHHHHHHCCC
Confidence 7 35445566654
No 195
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=51.29 E-value=27 Score=27.65 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=38.2
Q ss_pred CchhHhhhcce----EEE--ecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 35 GLIGELKRGGL----WVR--TASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 35 GLa~ELrRAGv----~Vr--tVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
|+-.+|+..|+ .|. ....+-... -..+.+..+.+++++-|++++.. ....+. . ...++-.|.+|-
T Consensus 28 gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~--~~~~~~~~l~~~~vDgII~~~~~-~~~~~~-~-~~~~iPvV~~~~ 98 (302)
T 2qh8_A 28 GLLDGLKAKGYEEGKNLEFDYKTAQGNPA--IAVQIARQFVGENPDVLVGIATP-TAQALV-S-ATKTIPIVFTAV 98 (302)
T ss_dssp HHHHHHHHTTCCBTTTEEEEEEECTTCHH--HHHHHHHHHHHTCCSEEEEESHH-HHHHHH-H-HCSSSCEEEEEE
T ss_pred HHHHHHHHcCCCCCCceEEEEecCCCCHH--HHHHHHHHHHhCCCCEEEECChH-HHHHHH-h-cCCCcCEEEEec
Confidence 66788999998 333 222222211 22334446668999998887643 222222 2 257888888874
No 196
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=51.16 E-value=36 Score=26.64 Aligned_cols=67 Identities=13% Similarity=0.035 Sum_probs=42.6
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.........-..+...+. ..+..+.++..|=++...+-+...+. .+..||-
T Consensus 39 G~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~ 110 (267)
T 4iiu_A 39 GRAIARQLAADGFNIGVHYHRDAAGAQETLNAIV---ANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVS 110 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEE
Confidence 6778999999999986544333322223333333 45777888888888877766555432 5666654
No 197
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=51.12 E-value=19 Score=27.95 Aligned_cols=70 Identities=16% Similarity=0.126 Sum_probs=45.0
Q ss_pred CCCchhHhhhcceEEEecCCCc-chHH-HHHHHHHHHHhhcCccEEEEEeCCcch------------------HHHHHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKP-QATD-VLLRNHLVITHKRRIEYLVVVSDDSDF------------------VEVLLEA 92 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKP-qAAD-~ALkrhm~~m~~~gv~clvLVSDdsdF------------------~~~Lr~A 92 (198)
|.-|+..|.+.|+.|..+...+ ...| .++.+.+. ..+++.||-...-..+ ..+++.|
T Consensus 18 G~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~---~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 94 (287)
T 3sc6_A 18 GKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQ---EIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVAS 94 (287)
T ss_dssp HHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHH---HHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHH---hcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 5568889999999998765422 1122 23333222 2389998877654432 3488999
Q ss_pred HhcCCcEEEEccC
Q 039912 93 NLRCLKTVVVGDI 105 (198)
Q Consensus 93 r~r~l~TVVVGd~ 105 (198)
++.+++-|.++-.
T Consensus 95 ~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 95 QLVGAKLVYISTD 107 (287)
T ss_dssp HHHTCEEEEEEEG
T ss_pred HHcCCeEEEEchh
Confidence 9999987777653
No 198
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=50.84 E-value=30 Score=25.01 Aligned_cols=46 Identities=11% Similarity=-0.013 Sum_probs=27.6
Q ss_pred HHHHHHHHHhh----cCccEEEEEeCCcc-------hHHHHHHHHhcCCcEEEEccC
Q 039912 60 LLRNHLVITHK----RRIEYLVVVSDDSD-------FVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 60 ALkrhm~~m~~----~gv~clvLVSDdsd-------F~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
||...+..+.+ ..-..|||+||-.. .....+.+++.|+...+||-+
T Consensus 87 al~~a~~~l~~~~~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg 143 (182)
T 1shu_X 87 GLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVL 143 (182)
T ss_dssp HHHHHHHHHHHHTGGGSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHhccCCCCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCC
Confidence 55554444322 24467999998531 234667788888876555543
No 199
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=50.81 E-value=31 Score=24.99 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=15.8
Q ss_pred chhHhhhcceEEEecCCCcch
Q 039912 36 LIGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA 56 (198)
+-..|+..|+.+-.++..+..
T Consensus 78 ~l~~l~~~g~~~~i~s~~~~~ 98 (205)
T 3m9l_A 78 LVRELAGRGYRLGILTRNARE 98 (205)
T ss_dssp HHHHHHHTTCEEEEECSSCHH
T ss_pred HHHHHHhcCCeEEEEeCCchH
Confidence 456778888888888887753
No 200
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=50.68 E-value=28 Score=27.41 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=43.2
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..+|..|.+.|..|-.+.+.+...-..+...+. ..|..+.++..|=++...+-+...+. .+..+|
T Consensus 21 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 91 (259)
T 3edm_A 21 GRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE---KLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLV 91 (259)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHH---TTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 6678999999999998774444432233333333 45777888888888877766555442 565555
No 201
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=50.31 E-value=44 Score=24.11 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=35.3
Q ss_pred chhHhhhcceEEEecCCCcchH-HHHHHHHHHHHhhcCcc---EEEEEeCCcch-----HHHHHHHHhcCC---cEEEEc
Q 039912 36 LIGELKRGGLWVRTASDKPQAT-DVLLRNHLVITHKRRIE---YLVVVSDDSDF-----VEVLLEANLRCL---KTVVVG 103 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAA-D~ALkrhm~~m~~~gv~---clvLVSDdsdF-----~~~Lr~Ar~r~l---~TVVVG 103 (198)
+-..|+..|+.+-.+|..|... ...|+ ..|+. ..++.|++... ..+.+.+++.|+ ++++||
T Consensus 104 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~-------~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iG 176 (230)
T 3um9_A 104 ALQQLRAAGLKTAILSNGSRHSIRQVVG-------NSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVS 176 (230)
T ss_dssp HHHHHHHTTCEEEEEESSCHHHHHHHHH-------HHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHhCCCeEEEEeCCCHHHHHHHHH-------HCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEe
Confidence 4467888999998888887532 22222 22332 13445554332 223344444565 488999
Q ss_pred cC
Q 039912 104 DI 105 (198)
Q Consensus 104 d~ 105 (198)
|+
T Consensus 177 D~ 178 (230)
T 3um9_A 177 CN 178 (230)
T ss_dssp SC
T ss_pred CC
Confidence 86
No 202
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=50.14 E-value=30 Score=27.59 Aligned_cols=66 Identities=17% Similarity=0.074 Sum_probs=43.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..+|..|.+.|..|-.....+...-..+...+. ..|..+.++..|=++...+-+...+. .+..+|
T Consensus 40 G~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv 110 (267)
T 3u5t_A 40 GAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE---AAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLV 110 (267)
T ss_dssp HHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 6678899999999998764444433344555444 45777888888888877766555432 555544
No 203
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=49.67 E-value=42 Score=25.43 Aligned_cols=66 Identities=15% Similarity=0.091 Sum_probs=41.1
Q ss_pred CCCchhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..++.+|.+.|..|..+ ...|...+ .+..++. ..+..+.++..|=++...+-+...+. ++..||-
T Consensus 18 G~~~a~~l~~~G~~V~~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~ 89 (247)
T 2hq1_A 18 GKAIAWKLGNMGANIVLNGSPASTSLD-ATAEEFK---AAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVN 89 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCSHHH-HHHHHHH---HTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCcCHHHHH-HHHHHHH---hcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 667899999999999876 33444333 3333333 34666777777877766554444332 6666653
No 204
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=49.64 E-value=32 Score=25.89 Aligned_cols=65 Identities=12% Similarity=0.149 Sum_probs=37.1
Q ss_pred hhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhc-CccEEEEEeCCc-----chHHHHHHHHhcCCc---EEEEccCC
Q 039912 37 IGELKRGGLWVRTASDKPQATDVLLRNHLVITHKR-RIEYLVVVSDDS-----DFVEVLLEANLRCLK---TVVVGDIN 106 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~-gv~clvLVSDds-----dF~~~Lr~Ar~r~l~---TVVVGd~~ 106 (198)
-..|++.|+.+-.++.+|... +...+..+ .. -++.+ +.|++. +=..++..+++.|+. +|+|||+.
T Consensus 119 l~~l~~~g~~~~i~t~~~~~~---~~~~l~~~-~l~~f~~~-~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~ 192 (240)
T 2hi0_A 119 MKNLRQKGVKLAVVSNKPNEA---VQVLVEEL-FPGSFDFA-LGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSE 192 (240)
T ss_dssp HHHHHHTTCEEEEEEEEEHHH---HHHHHHHH-STTTCSEE-EEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred HHHHHHCCCEEEEEeCCCHHH---HHHHHHHc-CCcceeEE-EecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 355788999988888887632 22222222 11 24443 345442 223455556666764 89999963
No 205
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=49.55 E-value=38 Score=26.94 Aligned_cols=67 Identities=19% Similarity=0.056 Sum_probs=43.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.....++..-..+...+. ..|..+.++..|=++...+-+...+. .+..||-
T Consensus 41 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~ 112 (269)
T 4dmm_A 41 GRAIALELAAAGAKVAVNYASSAGAADEVVAAIA---AAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVN 112 (269)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH---hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999997654433322233444333 45778888888888877766555442 6766654
No 206
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=49.45 E-value=24 Score=24.13 Aligned_cols=70 Identities=10% Similarity=0.026 Sum_probs=37.2
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHH-HH----------HHHh---hcCccEEEEEeCCcchHH-HHHHHHhcCC
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRN-HL----------VITH---KRRIEYLVVVSDDSDFVE-VLLEANLRCL 97 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkr-hm----------~~m~---~~gv~clvLVSDdsdF~~-~Lr~Ar~r~l 97 (198)
|..++..|.+.|+.|..+...|+..+.+... .. ..+. -.+.+.+++...+..... ++..|+..+.
T Consensus 16 G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 16 GYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGI 95 (140)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcCC
Confidence 3346778888888888776666655333221 00 0111 124565555554433322 4456676666
Q ss_pred cEEEE
Q 039912 98 KTVVV 102 (198)
Q Consensus 98 ~TVVV 102 (198)
+++|+
T Consensus 96 ~~ii~ 100 (140)
T 1lss_A 96 NKTIA 100 (140)
T ss_dssp CCEEE
T ss_pred CEEEE
Confidence 66655
No 207
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=49.35 E-value=19 Score=33.57 Aligned_cols=48 Identities=15% Similarity=0.075 Sum_probs=37.8
Q ss_pred CccEEEEEeCCc------chHHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 72 RIEYLVVVSDDS------DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 72 gv~clvLVSDds------dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
.-+||+++--+. .+...|+.|+++|.+-|||.=.- ....+.||.|++=
T Consensus 199 ~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr~-t~ta~~Ad~~l~i 252 (765)
T 2vpz_A 199 NARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPRF-STAAAKAHRWLPI 252 (765)
T ss_dssp GCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSBC-CTTGGGCSEEECC
T ss_pred cCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCCC-CcchhhCCeEeCC
Confidence 457888887652 67778899999999999997653 5688899999863
No 208
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=49.25 E-value=20 Score=26.83 Aligned_cols=48 Identities=15% Similarity=0.052 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhc--CccEEEEEeCCc----chHHHHHHHHhcCCcEEEEccCC
Q 039912 59 VLLRNHLVITHKR--RIEYLVVVSDDS----DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 59 ~ALkrhm~~m~~~--gv~clvLVSDds----dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.||...+..+... +-..|||+||-. +...+++.++..|++..+||-+.
T Consensus 96 ~al~~a~~~l~~~~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 96 EAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp HHHHHHHTTSCSCSSCCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESC
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecC
Confidence 3555554444222 456799999854 37889999999998777766554
No 209
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=49.16 E-value=25 Score=23.55 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=11.8
Q ss_pred hHhhhcceEEEecCCCcch
Q 039912 38 GELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqA 56 (198)
.+|++.|+.+-.+|..|..
T Consensus 28 ~~L~~~G~~~~i~S~~~~~ 46 (137)
T 2pr7_A 28 AAAKKNGVGTVILSNDPGG 46 (137)
T ss_dssp HHHHHTTCEEEEEECSCCG
T ss_pred HHHHHCCCEEEEEeCCCHH
Confidence 4566667666666666553
No 210
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=49.02 E-value=11 Score=26.66 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=38.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHH----------HHHhh---cCccEEEEEeCC-cchHHHHHHHHhcCCc
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHL----------VITHK---RRIEYLVVVSDD-SDFVEVLLEANLRCLK 98 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm----------~~m~~---~gv~clvLVSDd-sdF~~~Lr~Ar~r~l~ 98 (198)
|..+|..|.+.|+.|..+...|+..+.+..... ..+.. .+.+.+++..++ ..-..+...||+.+..
T Consensus 18 G~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 18 GVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 344888999999999988877776544432110 01111 245555554442 2233455666666644
Q ss_pred EEEE
Q 039912 99 TVVV 102 (198)
Q Consensus 99 TVVV 102 (198)
.|++
T Consensus 98 ~iia 101 (141)
T 3llv_A 98 YAIV 101 (141)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4443
No 211
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=48.69 E-value=42 Score=25.69 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=42.7
Q ss_pred CCCchhHhhhcceEEEecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..++.+|.+.|..|..+.. .+...+ .+.+++. ..+..+.++..|-++...+-+...+. ++..||-
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 91 (261)
T 1gee_A 20 GKSMAIRFATEKAKVVVNYRSKEDEAN-SVLEEIK---KVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMIN 91 (261)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHH---HTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCChHHHH-HHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66788999999999987655 444332 3333333 34666777888888877666555432 6766653
No 212
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=48.53 E-value=43 Score=25.35 Aligned_cols=66 Identities=12% Similarity=0.010 Sum_probs=43.2
Q ss_pred CCCchhHhhhcceEEEecCCC-cchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDK-PQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdK-PqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..++..|.+.|..|..+... |...+ .+..++. ..+..+.++..|=++...+-+...+. ++..||-
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~ 91 (258)
T 3afn_B 20 GLATARLFARAGAKVGLHGRKAPANID-ETIASMR---ADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLIN 91 (258)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCCTTHH-HHHHHHH---HTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEECCCchhhHH-HHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999876655 44443 3334333 34666777788888877665554432 6777664
No 213
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=48.43 E-value=32 Score=27.87 Aligned_cols=66 Identities=20% Similarity=0.124 Sum_probs=45.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|.+|.+.|..|-.+...++.... +...+. ..|..+.++..|=++...+-+.+.+. .+..||-
T Consensus 44 G~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~l~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvn 114 (301)
T 3tjr_A 44 GLATATEFARRGARLVLSDVDQPALEQ-AVNGLR---GQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFS 114 (301)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHH---hcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 677899999999999887665554433 333232 45788888889988887776655542 6666664
No 214
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=48.35 E-value=23 Score=29.98 Aligned_cols=67 Identities=12% Similarity=0.060 Sum_probs=47.7
Q ss_pred chhHhhhcceEEEecCCCcch-HHHHHHHHHHHHhhcCccE-----EEEEeCCcchHHHHHHHHhcCCc-EEEEccC
Q 039912 36 LIGELKRGGLWVRTASDKPQA-TDVLLRNHLVITHKRRIEY-----LVVVSDDSDFVEVLLEANLRCLK-TVVVGDI 105 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA-AD~ALkrhm~~m~~~gv~c-----lvLVSDdsdF~~~Lr~Ar~r~l~-TVVVGd~ 105 (198)
+...|+..|+.|-.|+.+|.. .-.+....+. ..||.. |+|-++.++-.+.+..-.+.|.+ .+.|||.
T Consensus 109 ll~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~---~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~ 182 (260)
T 3pct_A 109 FSNYVNANGGTMFFVSNRRDDVEKAGTVDDMK---RLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDN 182 (260)
T ss_dssp HHHHHHHTTCEEEEEEEEETTTSHHHHHHHHH---HHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEEEEEEESS
T ss_pred HHHHHHHCCCeEEEEeCCCccccHHHHHHHHH---HcCcCccccceeEecCCCCChHHHHHHHHhcCCCEEEEECCC
Confidence 467899999999999999975 4345555555 458875 77777777777776666654554 4568996
No 215
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=47.99 E-value=27 Score=30.31 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=40.2
Q ss_pred hhHhhhcceEEEecCCCcchH-----HHHHHHHHH-HHhhcCccE-EEEEeCCcch----HHHHHHHH-hcC----C---
Q 039912 37 IGELKRGGLWVRTASDKPQAT-----DVLLRNHLV-ITHKRRIEY-LVVVSDDSDF----VEVLLEAN-LRC----L--- 97 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAA-----D~ALkrhm~-~m~~~gv~c-lvLVSDdsdF----~~~Lr~Ar-~r~----l--- 97 (198)
-.+|+.+|+.+-.++.+|.-+ ...+...+. .+...|+.- .++.|++..+ .+++..|- +.| +
T Consensus 96 L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~ 175 (416)
T 3zvl_A 96 LQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVE 175 (416)
T ss_dssp HHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGG
T ss_pred HHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHH
Confidence 467899999999999987321 112222222 333456443 3445555543 24454444 444 4
Q ss_pred cEEEEccCC
Q 039912 98 KTVVVGDIN 106 (198)
Q Consensus 98 ~TVVVGd~~ 106 (198)
++++|||..
T Consensus 176 ~~l~VGDs~ 184 (416)
T 3zvl_A 176 DSVFVGDAA 184 (416)
T ss_dssp GCEEECSCS
T ss_pred HeEEEECCC
Confidence 589999973
No 216
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=47.97 E-value=9.2 Score=29.87 Aligned_cols=32 Identities=6% Similarity=0.196 Sum_probs=24.0
Q ss_pred cCccEEEEEeCCcc--------hHHHHHHHHhcCCcEEEE
Q 039912 71 RRIEYLVVVSDDSD--------FVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 71 ~gv~clvLVSDdsd--------F~~~Lr~Ar~r~l~TVVV 102 (198)
.|++.||....... ...+++.|++.|++.+|.
T Consensus 64 ~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~ 103 (289)
T 3e48_A 64 KGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIF 103 (289)
T ss_dssp TTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEE
Confidence 48999998876532 346789999999976664
No 217
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=47.87 E-value=36 Score=26.73 Aligned_cols=67 Identities=13% Similarity=0.114 Sum_probs=43.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+...-..+...+ ...+..+.++..|=++...+-+.+.+. .+..||-
T Consensus 38 G~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 109 (269)
T 3gk3_A 38 GAAISRRLHDAGMAVAVSHSERNDHVSTWLMHE---RDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLIN 109 (269)
T ss_dssp HHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHH---HTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHH---HhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667899999999999876533332222333322 245677888888888887776655542 6776664
No 218
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=47.63 E-value=16 Score=33.70 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=37.8
Q ss_pred cCccEEEEEeCCc------chHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 71 RRIEYLVVVSDDS------DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 71 ~gv~clvLVSDds------dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
..-+|||++--+. .+...|+.|+++|.+-|||.=.- ....+.||.|++
T Consensus 159 ~~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr~-t~ta~~Ad~~l~ 212 (727)
T 2e7z_A 159 ADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPRR-TKVAEMADIWLP 212 (727)
T ss_dssp TTCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSSC-CHHHHHCSEEEC
T ss_pred ccCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCCC-Ccchhhcceeec
Confidence 3467898887653 67778999999999999997653 567888999984
No 219
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=47.52 E-value=13 Score=30.26 Aligned_cols=79 Identities=22% Similarity=0.145 Sum_probs=46.3
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEE----E---------EeCC-----cchHHHHHHHHhcCC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLV----V---------VSDD-----SDFVEVLLEANLRCL 97 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clv----L---------VSDd-----sdF~~~Lr~Ar~r~l 97 (198)
+-.+|+++|+.+-.+|..+...-..+.+ ..|++.++ - ++++ +.-..+.+.+++.|+
T Consensus 186 ~l~~L~~~g~~~~ivS~~~~~~~~~~~~------~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~lgi 259 (335)
T 3n28_A 186 LVATLHAFGWKVAIASGGFTYFSDYLKE------QLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDV 259 (335)
T ss_dssp HHHHHHHTTCEEEEEEEEEHHHHHHHHH------HHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCEEEEEeCCcHHHHHHHHH------HcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHcCC
Confidence 4567899999999998877633223322 23444321 1 2222 222335555666676
Q ss_pred ---cEEEEccCC-CccccchhcccccH
Q 039912 98 ---KTVVVGDIN-DGALKRISYACFSW 120 (198)
Q Consensus 98 ---~TVVVGd~~-~~~L~R~AD~~fsW 120 (198)
.+++|||+. |-...+.|++.+-|
T Consensus 260 ~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 260 EIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp CGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 699999953 33445667776665
No 220
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=47.40 E-value=12 Score=31.29 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=46.5
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEE---EEeCC---------------cchHHHHHHHHhcC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLV---VVSDD---------------SDFVEVLLEANLRC 96 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clv---LVSDd---------------sdF~~~Lr~Ar~r~ 96 (198)
.+-..|++.|+.+-.||..|...=..+. ...|++.++ +.+++ +.-.-+.+.+++.|
T Consensus 186 e~L~~Lk~~G~~v~IvSn~~~~~~~~~l------~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~lg 259 (317)
T 4eze_A 186 TILPVIKAKGFKTAIISGGLDIFTQRLK------ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLN 259 (317)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHH------HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCEEEEEeCccHHHHHHHH------HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHcC
Confidence 4567889999999999988763211221 234555422 22222 12122444455567
Q ss_pred C---cEEEEccCC-CccccchhcccccH
Q 039912 97 L---KTVVVGDIN-DGALKRISYACFSW 120 (198)
Q Consensus 97 l---~TVVVGd~~-~~~L~R~AD~~fsW 120 (198)
+ .+++|||+. |-...+.|.+.+-|
T Consensus 260 v~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 260 IATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred CCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 6 699999953 34455667776666
No 221
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=47.18 E-value=42 Score=23.75 Aligned_cols=75 Identities=24% Similarity=0.211 Sum_probs=42.5
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE----EEEEeC--------------CcchHHHHHHHHhcCC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY----LVVVSD--------------DSDFVEVLLEANLRCL 97 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c----lvLVSD--------------dsdF~~~Lr~Ar~r~l 97 (198)
+-..|+..|+.+-.++.+|... ....+. ..|++. .+.+.+ .+.-..+++.+++.|+
T Consensus 84 ~l~~l~~~g~~~~i~T~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~lgi 157 (211)
T 1l7m_A 84 TIKELKNRGYVVAVVSGGFDIA---VNKIKE---KLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGI 157 (211)
T ss_dssp HHHHHHHTTEEEEEEEEEEHHH---HHHHHH---HHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCEEEEEcCCcHHH---HHHHHH---HcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHHcCC
Confidence 4566788999999888887542 112122 234443 222222 1233456677777787
Q ss_pred c---EEEEccCC-Cccccchhcc
Q 039912 98 K---TVVVGDIN-DGALKRISYA 116 (198)
Q Consensus 98 ~---TVVVGd~~-~~~L~R~AD~ 116 (198)
. +++|||+. |-...+.|.+
T Consensus 158 ~~~~~~~iGD~~~Di~~~~~ag~ 180 (211)
T 1l7m_A 158 NLEDTVAVGDGANDISMFKKAGL 180 (211)
T ss_dssp CGGGEEEEECSGGGHHHHHHCSE
T ss_pred CHHHEEEEecChhHHHHHHHCCC
Confidence 5 99999964 2223344444
No 222
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=46.78 E-value=67 Score=23.41 Aligned_cols=69 Identities=17% Similarity=0.153 Sum_probs=38.2
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc-----hHHHHHHHHhcCC---cEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD-----FVEVLLEANLRCL---KTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd-----F~~~Lr~Ar~r~l---~TVVVGd~~ 106 (198)
.+-..|++.|+.+-.++..+...=..+.+++. + ..-++ .++.|++.. =..+.+.+++.|+ .+++|||+.
T Consensus 111 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~-l-~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 111 EGLDRLSAAGFRLAMATSKVEKAARAIAELTG-L-DTRLT-VIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGV 187 (237)
T ss_dssp HHHHHHHHTTEEEEEECSSCHHHHHHHHHHHT-G-GGTCS-EEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred HHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC-c-hhhee-eEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 35567888999999999988642122222211 1 11223 344455422 1234444555666 489999964
No 223
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=46.69 E-value=29 Score=31.08 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=20.3
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSD 81 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSD 81 (198)
+|.+||++|+.|.+..... .++++|...++.|+.++|+|.+
T Consensus 380 la~~LR~~Gi~ve~~~~~~-----slkkq~k~A~k~ga~~vviiGe 420 (456)
T 3lc0_A 380 VLRRLRDAGRSADIILDKK-----KVVQAFNYADRVGAVRAVLVAP 420 (456)
T ss_dssp HHHHHHHTTCCEEECCSCC-----CHHHHHHHHHHTTEEEEEEECH
T ss_pred HHHHHHHCCCeEEEecCCC-----CHHHHHHHHHHcCCCEEEEECC
Confidence 3555555555555422111 1555555555555555555554
No 224
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=46.57 E-value=47 Score=25.43 Aligned_cols=21 Identities=19% Similarity=0.261 Sum_probs=14.8
Q ss_pred chhHhhhcceEEEecCCCcch
Q 039912 36 LIGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA 56 (198)
+-..|+..|+.+-+++..+.+
T Consensus 124 ll~~Lk~~g~~i~i~~~~~~~ 144 (250)
T 4gib_A 124 LLIDVKSNNIKIGLSSASKNA 144 (250)
T ss_dssp HHHHHHHTTCEEEECCSCTTH
T ss_pred HHHHHHhcccccccccccchh
Confidence 445678888888777766654
No 225
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=46.54 E-value=40 Score=26.72 Aligned_cols=58 Identities=14% Similarity=-0.035 Sum_probs=46.5
Q ss_pred HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc--EEEEccCCCccccchhccccc
Q 039912 60 LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK--TVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~--TVVVGd~~~~~L~R~AD~~fs 119 (198)
++..+...+..+|++-|+-||=|+-|+ +.+.+++.++. ..++.|.+ +.+.+.-.+++.
T Consensus 70 ~f~~~~~ef~~~g~d~VigIS~D~~~~-~~~f~~~~~l~~~f~lLsD~~-~~va~ayGv~~~ 129 (176)
T 4f82_A 70 GYVEHAEQLRAAGIDEIWCVSVNDAFV-MGAWGRDLHTAGKVRMMADGS-AAFTHALGLTQD 129 (176)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESSCHHH-HHHHHHHTTCTTTSEEEECTT-CHHHHHHTCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEeCCCHHH-HHHHHHHhCCCCCceEEEcCc-hHHHHHhCCCcc
Confidence 677777777789998888899998875 67888889998 99999975 778777666653
No 226
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=46.47 E-value=28 Score=27.30 Aligned_cols=65 Identities=12% Similarity=0.105 Sum_probs=38.2
Q ss_pred CchhHhhhcce---EEEec--CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 35 GLIGELKRGGL---WVRTA--SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 35 GLa~ELrRAGv---~VrtV--sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
|+-.+|++.|+ .|... ...-... -..+.+..+.+++++-|++++.. .. ..+... ..++-.|++|-
T Consensus 22 gi~~~l~~~gy~g~~v~l~~~~~~~~~~--~~~~~~~~l~~~~vDgII~~~~~-~~-~~~~~~-~~~iPvV~~~~ 91 (295)
T 3lft_A 22 GIQDGLAEEGYKDDQVKIDFMNSEGDQS--KVATMSKQLVANGNDLVVGIATP-AA-QGLASA-TKDLPVIMAAI 91 (295)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEECTTCHH--HHHHHHHHHTTSSCSEEEEESHH-HH-HHHHHH-CSSSCEEEESC
T ss_pred HHHHHHHHcCCCCCceEEEEecCCCCHH--HHHHHHHHHHhcCCCEEEECCcH-HH-HHHHHc-CCCCCEEEEec
Confidence 56778889998 54431 2221111 22344456778999998887643 22 223222 47888888874
No 227
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=46.46 E-value=73 Score=24.84 Aligned_cols=69 Identities=9% Similarity=-0.030 Sum_probs=42.4
Q ss_pred CchhHhhhcceE-EEecCCCcchH-HHHHHHHHHHHhhcCccEEEEEe--------------------CC-------cch
Q 039912 35 GLIGELKRGGLW-VRTASDKPQAT-DVLLRNHLVITHKRRIEYLVVVS--------------------DD-------SDF 85 (198)
Q Consensus 35 GLa~ELrRAGv~-VrtVsdKPqAA-D~ALkrhm~~m~~~gv~clvLVS--------------------Dd-------sdF 85 (198)
.....++++||- |......|... +..+.+-...+.+.|+.+.++.+ |. ..|
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 104 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEM 104 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 445677888874 44433333311 12222222266688999877743 11 246
Q ss_pred HHHHHHHHhcCCcEEEEc
Q 039912 86 VEVLLEANLRCLKTVVVG 103 (198)
Q Consensus 86 ~~~Lr~Ar~r~l~TVVVG 103 (198)
...++.|++-|.++||+.
T Consensus 105 ~~~i~~a~~lG~~~v~~~ 122 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLH 122 (290)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 788999999999999984
No 228
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=46.38 E-value=70 Score=22.11 Aligned_cols=66 Identities=18% Similarity=0.112 Sum_probs=46.2
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc---hHHHHHHHHhcCCcEEEEccCCCccccchh
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD---FVEVLLEANLRCLKTVVVGDINDGALKRIS 114 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd---F~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~A 114 (198)
..++|||-.+.= .++...++++|--.||+++.|.+ ...+..++++.++.-+.+++. ..|++..
T Consensus 4 ~~~~kagk~~~G------------~~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk--~eLG~a~ 69 (82)
T 3v7e_A 4 DKVSQAKSIIIG------------TKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESM--KKLGKAC 69 (82)
T ss_dssp HHHHHCSEEEES------------HHHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCH--HHHHHHH
T ss_pred HHHHHcCCeeEc------------HHHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCH--HHHHHHh
Confidence 457888865543 12333344678888888888876 556777899999999999964 5687765
Q ss_pred ccc
Q 039912 115 YAC 117 (198)
Q Consensus 115 D~~ 117 (198)
-..
T Consensus 70 Gk~ 72 (82)
T 3v7e_A 70 GIE 72 (82)
T ss_dssp TCS
T ss_pred CCC
Confidence 433
No 229
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=46.34 E-value=25 Score=29.09 Aligned_cols=42 Identities=17% Similarity=0.076 Sum_probs=33.0
Q ss_pred cEEEEEeCC---cchHHHHHHHHhcCCcEEEEccCCCccccchhcccc
Q 039912 74 EYLVVVSDD---SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACF 118 (198)
Q Consensus 74 ~clvLVSDd---sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~f 118 (198)
+.+|.+|-. .+-..+++.|+++|.++|.|-+.. .|.|. |+.+
T Consensus 81 dlvI~iS~SG~T~e~~~a~~~ak~~g~~~iaIT~~~--~La~~-~~~l 125 (302)
T 1tzb_A 81 GLLIAVSYSGNTIETLYTVEYAKRRRIPAVAITTGG--RLAQM-GVPT 125 (302)
T ss_dssp SEEEEECSSSCCHHHHHHHHHHHHTTCCEEEEESST--TGGGS-SSCE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEECCCc--hHHHC-CeeE
Confidence 556777753 456678889999999999999864 89998 8776
No 230
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=45.98 E-value=32 Score=25.75 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=45.2
Q ss_pred hhcceEEEecCCCcchHHHHHHHHHHHHh----hcCccEEEEEeC----------CcchHHHHHHHHhcC--CcEEEEcc
Q 039912 41 KRGGLWVRTASDKPQATDVLLRNHLVITH----KRRIEYLVVVSD----------DSDFVEVLLEANLRC--LKTVVVGD 104 (198)
Q Consensus 41 rRAGv~VrtVsdKPqAAD~ALkrhm~~m~----~~gv~clvLVSD----------dsdF~~~Lr~Ar~r~--l~TVVVGd 104 (198)
.|+-.|+|. |..-|+....|.+|...+. ..|...+=..+| .+.|..+|..+++-. +.+|||=+
T Consensus 5 ~r~~~Y~Rv-St~~q~~~~sl~~Q~~~l~~~a~~~g~~i~~~~~D~g~Sg~~~~~Rp~l~~ll~~~~~g~~~~d~lvv~~ 83 (167)
T 3guv_A 5 IKVYLYTRV-STSIQIEGYSLEAQKSRMKAFAIYNDYEIVGEYEDAGKSGKSIEGRIQFNRMMEDIKSGKDGVSFVLVFK 83 (167)
T ss_dssp CEEEEEEEC-SSCHHHHGGGHHHHHHHHHHHHHHTTCEEEEEEEECCCSSSSSCCCHHHHHHHHHHHTCTTCCSEEEESC
T ss_pred cEEEEEEEE-CCcccccCCCHHHHHHHHHHHHHhCCCEEEEEEeecCCCCCCcccCHHHHHHHHHHHcCCCCccEEEEEe
Confidence 467788886 6555643235666665332 346554323333 456888999988866 89999988
Q ss_pred CCCccccchh
Q 039912 105 INDGALKRIS 114 (198)
Q Consensus 105 ~~~~~L~R~A 114 (198)
.+ -|+|..
T Consensus 84 ld--Rl~R~~ 91 (167)
T 3guv_A 84 LS--RFARNA 91 (167)
T ss_dssp GG--GTCSSH
T ss_pred Cc--hhcCCH
Confidence 75 377764
No 231
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=45.90 E-value=34 Score=27.17 Aligned_cols=67 Identities=15% Similarity=0.043 Sum_probs=44.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++....++.. +.. ..|..+.++..|=++...+-+...+. .+..||-
T Consensus 40 G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 111 (277)
T 4fc7_A 40 GFRIAEIFMRHGCHTVIASRSLPRVLTAARK-LAG--ATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILIN 111 (277)
T ss_dssp HHHHHHHHHTTTCEEEEEESCHHHHHHHHHH-HHH--HHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHH--hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998776665544333332 221 24678888888888877665554432 6766653
No 232
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=45.87 E-value=39 Score=24.34 Aligned_cols=65 Identities=22% Similarity=0.211 Sum_probs=37.4
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc---EEEEEeCCcch-----HHHHHHHHhcCC---cEEEEcc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE---YLVVVSDDSDF-----VEVLLEANLRCL---KTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~---clvLVSDdsdF-----~~~Lr~Ar~r~l---~TVVVGd 104 (198)
+-.+|+..|+.+-.++..+... +...+. ..|+. ..++.|++... ..+...+++.|+ .+++|||
T Consensus 99 ~l~~l~~~g~~~~i~s~~~~~~---~~~~l~---~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD 172 (233)
T 3s6j_A 99 LLETLDKENLKWCIATSGGIDT---ATINLK---ALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGD 172 (233)
T ss_dssp HHHHHHHTTCCEEEECSSCHHH---HHHHHH---TTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHCCCeEEEEeCCchhh---HHHHHH---hcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeC
Confidence 4567888999998888876532 222122 23443 24555555432 233444455665 4899999
Q ss_pred CC
Q 039912 105 IN 106 (198)
Q Consensus 105 ~~ 106 (198)
+.
T Consensus 173 ~~ 174 (233)
T 3s6j_A 173 AI 174 (233)
T ss_dssp SH
T ss_pred CH
Confidence 64
No 233
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=45.61 E-value=48 Score=26.22 Aligned_cols=67 Identities=15% Similarity=0.062 Sum_probs=41.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..-..+...+. ..|.+..++..|=++...+-+...+ -++..||-
T Consensus 42 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 113 (283)
T 1g0o_A 42 GREMAMELGRRGCKVIVNYANSTESAEEVVAAIK---KNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCS 113 (283)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998765555432223333333 4466777778887777666554433 25665553
No 234
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=45.46 E-value=23 Score=30.15 Aligned_cols=64 Identities=14% Similarity=0.194 Sum_probs=46.3
Q ss_pred HhccCCCCCCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHH
Q 039912 25 RAVLTPEVGNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLE 91 (198)
Q Consensus 25 r~lltPkvgyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~ 91 (198)
.-++.|-++||...+... |-=|++=.|+..-..|..-+.++...|+..||+|+..-.=...|+.
T Consensus 75 ~~~v~P~i~yG~s~~h~~---fpGTisl~~~t~~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~~ 138 (267)
T 3no4_A 75 GAIVGPTINVGMALHHTA---FPGTISLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKA 138 (267)
T ss_dssp TCEECCCBCCCCCGGGTT---STTCBCCCHHHHHHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHHH
T ss_pred CcEEeCCEeecccccccC---CCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHHH
Confidence 358899999999887643 2236666777664445554458889999999999999775555554
No 235
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=45.35 E-value=25 Score=29.81 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=47.1
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEE-------------EeCC-----cchHHHHHHHHhcC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVV-------------VSDD-----SDFVEVLLEANLRC 96 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvL-------------VSDd-----sdF~~~Lr~Ar~r~ 96 (198)
.+-..|++.|+.+-.+|..+...=.. .+...|++.++- ++++ +.-.-+.+.+++.|
T Consensus 263 e~l~~Lk~~G~~~~ivS~~~~~~~~~------~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~g 336 (415)
T 3p96_A 263 TTLRTLRRLGYACGVVSGGFRRIIEP------LAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAG 336 (415)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHH------HHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHH------HHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcC
Confidence 46678999999999999877632111 222357765431 2222 12222344445567
Q ss_pred C---cEEEEccCC-CccccchhcccccH
Q 039912 97 L---KTVVVGDIN-DGALKRISYACFSW 120 (198)
Q Consensus 97 l---~TVVVGd~~-~~~L~R~AD~~fsW 120 (198)
+ .+++|||+. |-...+.|.+.+-|
T Consensus 337 i~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 337 VPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred cChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 6 699999964 33445667766665
No 236
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=45.28 E-value=33 Score=33.66 Aligned_cols=46 Identities=17% Similarity=0.130 Sum_probs=30.5
Q ss_pred chHHHHHHHHhcCCcEEEEccC-CCccccchhcccccHHHHhhc-hhhhhhhh
Q 039912 84 DFVEVLLEANLRCLKTVVVGDI-NDGALKRISYACFSWWDILMG-KARKEAVS 134 (198)
Q Consensus 84 dF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~~fsW~eV~~G-ka~k~A~~ 134 (198)
+-..+++..++.|-.+.++||+ ||-..=+.||+++. || .+...|.+
T Consensus 707 ~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIA-----Mg~ng~d~aK~ 754 (1034)
T 3ixz_A 707 QKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVA-----MGIAGSDAAKN 754 (1034)
T ss_pred HHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEE-----eCCccCHHHHH
Confidence 4456777777888889999995 45444467888765 56 44444443
No 237
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=45.16 E-value=42 Score=25.65 Aligned_cols=66 Identities=14% Similarity=0.082 Sum_probs=44.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+...+ .+...+. ..|..+.++..|=++...+-+...+- .+..||-
T Consensus 18 G~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 88 (247)
T 3lyl_A 18 GFEVAHALASKGATVVGTATSQASAE-KFENSMK---EKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVN 88 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHH---hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 67789999999999987666554443 3334333 45778888888888877766655542 5666654
No 238
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=44.97 E-value=66 Score=25.32 Aligned_cols=51 Identities=8% Similarity=0.042 Sum_probs=32.9
Q ss_pred HHHHHHHHhhcCccEEEEEe-CCcchHHHHHHHHhcCCcEEEEccCCCcccc
Q 039912 61 LRNHLVITHKRRIEYLVVVS-DDSDFVEVLLEANLRCLKTVVVGDINDGALK 111 (198)
Q Consensus 61 Lkrhm~~m~~~gv~clvLVS-DdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~ 111 (198)
|.+....+...|+.+-+.+. ..+-...+++.|++.+..-||+|-...+.++
T Consensus 75 l~~~~~~~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~~~~~ 126 (319)
T 3olq_A 75 IKQQARYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHDKLG 126 (319)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC--CC
T ss_pred HHHHHHHHhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcCchhh
Confidence 33333333356787765555 6666778888898899999999875433333
No 239
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=44.87 E-value=83 Score=24.04 Aligned_cols=64 Identities=11% Similarity=0.095 Sum_probs=40.0
Q ss_pred chhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc----chHHHHHHHHhcCC--cEEEEccC
Q 039912 36 LIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS----DFVEVLLEANLRCL--KTVVVGDI 105 (198)
Q Consensus 36 La~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds----dF~~~Lr~Ar~r~l--~TVVVGd~ 105 (198)
++..|+.+||-|.-. .+.|. +. +.+ .....+.+.|+|-|-.. .+..+++..|+.+. -.|+||..
T Consensus 38 va~~l~~~G~eVi~lG~~~p~--e~-lv~---aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 38 VARALRDAGFEVVYTGLRQTP--EQ-VAM---AAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHHHTTCEEECCCSBCCH--HH-HHH---HHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHHHHCCCEEEECCCCCCH--HH-HHH---HHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 467899999999853 23332 22 223 22256888888776543 35566667777765 35778874
No 240
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=44.87 E-value=40 Score=26.44 Aligned_cols=58 Identities=14% Similarity=0.034 Sum_probs=41.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL 94 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~ 94 (198)
|..+|..|.+.|..|-.+...++..+. +...+. ..|..+.++..|=++...+-+.+.+
T Consensus 20 G~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 20 GAEIAKKFAAEGFTVFAGRRNGEKLAP-LVAEIE---AAGGRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGGHH-HHHHHH---HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHH---hcCCeEEEEECcCCCHHHHHHHHHH
Confidence 667889999999999887776666543 333333 4477888888888887776555544
No 241
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=44.80 E-value=18 Score=33.36 Aligned_cols=48 Identities=13% Similarity=0.099 Sum_probs=37.7
Q ss_pred CccEEEEEeCC-----cchHHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 72 RIEYLVVVSDD-----SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 72 gv~clvLVSDd-----sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
.-+|||++--+ ..+..-|+.||++|.+-|||.=.- ....+.||.|++=
T Consensus 166 ~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr~-t~ta~~Ad~~l~i 218 (715)
T 2iv2_X 166 NTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRK-IETARIADMHIAL 218 (715)
T ss_dssp GCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSSC-CHHHHTCSEEECC
T ss_pred cCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCCC-CchhHhhCEEecc
Confidence 46889988765 345667889999999999997653 5688899999874
No 242
>3bvp_A INT, TP901-1 integrase; DNA recombinase, recombination; 2.10A {Lactococcus phage tp901-1}
Probab=44.47 E-value=23 Score=25.89 Aligned_cols=71 Identities=15% Similarity=0.218 Sum_probs=44.9
Q ss_pred hhcceEEEecCCCcchHH-HHHHHHHHH----HhhcCccEEEEEeC---------CcchHHHHHHHHhcCCcEEEEccCC
Q 039912 41 KRGGLWVRTASDKPQATD-VLLRNHLVI----THKRRIEYLVVVSD---------DSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 41 rRAGv~VrtVsdKPqAAD-~ALkrhm~~----m~~~gv~clvLVSD---------dsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.|+-.|+|. |..-|..+ ..|.+|... ....|..+.-..+| .+.|..+|..+++..+.+|||=+.+
T Consensus 3 ~~~~~Y~Rv-St~~Q~~~~~sl~~Q~~~l~~~a~~~g~~~~~~~~D~g~Sg~~~~Rp~l~~ll~~~~~g~~d~lvv~~ld 81 (138)
T 3bvp_A 3 KKVAIYTRV-STTNQAEEGFSIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPAMQRLINDIENKAFDTVLVYKLD 81 (138)
T ss_dssp CEEEEEEEE-SSSCGGGSSSCHHHHHHHHHHHHHHTTCEEEEEEEEETCCSSSSCCHHHHHHHHGGGGTSCSEEEESSHH
T ss_pred cEEEEEEEE-CchhhcccCCCHHHHHHHHHHHHHHCCCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 356778886 55555421 123344332 12457766544444 4689999999999889999999875
Q ss_pred Cccccchh
Q 039912 107 DGALKRIS 114 (198)
Q Consensus 107 ~~~L~R~A 114 (198)
-|+|..
T Consensus 82 --Rl~R~~ 87 (138)
T 3bvp_A 82 --RLSRSV 87 (138)
T ss_dssp --HHCSCH
T ss_pred --cccccH
Confidence 377753
No 243
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=44.22 E-value=41 Score=23.17 Aligned_cols=40 Identities=20% Similarity=0.230 Sum_probs=28.1
Q ss_pred cCc---cEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCCccccc
Q 039912 71 RRI---EYLVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 71 ~gv---~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
.|+ ++.+. +. +-...+++.|++.+..-||+|-...+.+++
T Consensus 73 ~g~~~~~~~~~-~g-~~~~~I~~~a~~~~~dliV~G~~~~~~~~~ 115 (137)
T 2z08_A 73 TGVPKEDALLL-EG-VPAEAILQAARAEKADLIVMGTRGLGALGS 115 (137)
T ss_dssp HCCCGGGEEEE-ES-SHHHHHHHHHHHTTCSEEEEESSCTTCCSC
T ss_pred cCCCccEEEEE-ec-CHHHHHHHHHHHcCCCEEEECCCCCchhhh
Confidence 465 44433 33 456789999999999999999864344443
No 244
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=44.22 E-value=21 Score=29.11 Aligned_cols=59 Identities=12% Similarity=0.020 Sum_probs=39.9
Q ss_pred HhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcE
Q 039912 39 ELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKT 99 (198)
Q Consensus 39 ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~T 99 (198)
++++.|.-|....=.+...| ....+..+.+.+.+.|++.+...+...+++.|++.|+..
T Consensus 160 ~~~~~g~~v~~~~~~~~~~d--~~~~l~~i~~~~~~vi~~~~~~~~~~~~~~qa~~~gl~~ 218 (395)
T 3h6g_A 160 APSRYNLRLKIRQLPADTKD--AKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMT 218 (395)
T ss_dssp GGGTSSCEEEEEECCSSGGG--GHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred hhhcCCceEEEEEeCCCchh--HHHHHHHHhhcCCeEEEEECCHHHHHHHHHHHHHccccC
Confidence 45566776654321122232 334444554678999999999999999999999999853
No 245
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=44.10 E-value=79 Score=24.64 Aligned_cols=63 Identities=6% Similarity=-0.114 Sum_probs=41.6
Q ss_pred chhHhhhcceEEEecCC--------------------Cc---chHHHHHHHHHHHHhhcCccEEEEEeCCc---------
Q 039912 36 LIGELKRGGLWVRTASD--------------------KP---QATDVLLRNHLVITHKRRIEYLVVVSDDS--------- 83 (198)
Q Consensus 36 La~ELrRAGv~VrtVsd--------------------KP---qAAD~ALkrhm~~m~~~gv~clvLVSDds--------- 83 (198)
+...|++.|+.+-.+.- .| +++-..+++.+......|+..|++.+...
T Consensus 56 ~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~ 135 (290)
T 3tva_A 56 FRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYS 135 (290)
T ss_dssp HHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHH
T ss_pred HHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHH
Confidence 45667788888765421 12 23445677777777789999999865311
Q ss_pred ----chHHHHHHHHhcCCc
Q 039912 84 ----DFVEVLLEANLRCLK 98 (198)
Q Consensus 84 ----dF~~~Lr~Ar~r~l~ 98 (198)
.|..+.+.|++.|++
T Consensus 136 ~~~~~l~~l~~~a~~~Gv~ 154 (290)
T 3tva_A 136 ELVRVTQDLLTHAANHGQA 154 (290)
T ss_dssp HHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHcCCE
Confidence 256677778888884
No 246
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=43.97 E-value=84 Score=25.50 Aligned_cols=33 Identities=12% Similarity=-0.113 Sum_probs=22.6
Q ss_pred HhhcCccEEEEEeC-CcchHHHHHHHHhcCCcEEEEc
Q 039912 68 THKRRIEYLVVVSD-DSDFVEVLLEANLRCLKTVVVG 103 (198)
Q Consensus 68 m~~~gv~clvLVSD-dsdF~~~Lr~Ar~r~l~TVVVG 103 (198)
+...+.|+|+ +| -..|. ....|+..|+.+|.+.
T Consensus 114 l~~~~PDlVi--~d~~~~~~-~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 114 LDGDVPDLVL--YDDFPFIA-GQLLAARWRRPAVRLS 147 (415)
T ss_dssp HSSSCCSEEE--EESTTHHH-HHHHHHHTTCCEEEEE
T ss_pred HhccCCCEEE--ECchhhhH-HHHHHHHhCCCEEEEE
Confidence 3345677766 56 44554 4456888999999987
No 247
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=43.81 E-value=28 Score=33.82 Aligned_cols=38 Identities=16% Similarity=0.011 Sum_probs=27.0
Q ss_pred CcchHHHHHHHHhcCCcEEEEccC-CCccccchhccccc
Q 039912 82 DSDFVEVLLEANLRCLKTVVVGDI-NDGALKRISYACFS 119 (198)
Q Consensus 82 dsdF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~~fs 119 (198)
..+-..+++.-+++|-.+.+|||+ ||-..-+.||+++.
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgia 720 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA 720 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEE
Confidence 345667777777788788999995 44334467888776
No 248
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=43.80 E-value=26 Score=28.68 Aligned_cols=67 Identities=12% Similarity=0.038 Sum_probs=38.1
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc-----EEEEEeCCcch-HHHHHHHHhcCCc-EEEEccCC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE-----YLVVVSDDSDF-VEVLLEANLRCLK-TVVVGDIN 106 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~-----clvLVSDdsdF-~~~Lr~Ar~r~l~-TVVVGd~~ 106 (198)
+-..|++.|+.+-.+|.+|...-..+...+. ..|+. .+++ +.+..+ ...++...+.+.. +++|||..
T Consensus 109 ~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~---~~Gl~~v~~~~vi~-~~~~~~K~~~~~~~~~~~~~~~l~VGDs~ 182 (258)
T 2i33_A 109 FLKYTESKGVDIYYISNRKTNQLDATIKNLE---RVGAPQATKEHILL-QDPKEKGKEKRRELVSQTHDIVLFFGDNL 182 (258)
T ss_dssp HHHHHHHTTCEEEEEEEEEGGGHHHHHHHHH---HHTCSSCSTTTEEE-ECTTCCSSHHHHHHHHHHEEEEEEEESSG
T ss_pred HHHHHHHCCCEEEEEcCCchhHHHHHHHHHH---HcCCCcCCCceEEE-CCCCCCCcHHHHHHHHhCCCceEEeCCCH
Confidence 4567899999999999998654333444333 34555 3444 444222 2333333333332 66899963
No 249
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=43.59 E-value=46 Score=26.64 Aligned_cols=66 Identities=15% Similarity=0.082 Sum_probs=46.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+. +...+. ..|..+..+..|=++...+-+...+. ++..||-
T Consensus 45 G~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvn 115 (276)
T 3r1i_A 45 GKKVALAYAEAGAQVAVAARHSDALQV-VADEIA---GVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVC 115 (276)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGGHH-HHHHHH---HTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHH---hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667899999999999887766666543 344333 45667888888888877766655542 6776664
No 250
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=43.05 E-value=63 Score=23.35 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=41.5
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEE---EE-eCCc-----------chHHHHHHHHhcCCcEE
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLV---VV-SDDS-----------DFVEVLLEANLRCLKTV 100 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clv---LV-SDds-----------dF~~~Lr~Ar~r~l~TV 100 (198)
+-..|++. +.+-.+|..|... +.. .+...|+...+ ++ +++. .|..+++......-+++
T Consensus 77 ~l~~l~~~-~~~~i~s~~~~~~---~~~---~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~ 149 (206)
T 1rku_A 77 FVDWLRER-FQVVILSDTFYEF---SQP---LMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVI 149 (206)
T ss_dssp HHHHHHTT-SEEEEEEEEEHHH---HHH---HHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhc-CcEEEEECChHHH---HHH---HHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCEEE
Confidence 34567777 8888888877532 122 22234555322 33 3443 25566665555566799
Q ss_pred EEccCC-Cccccchhccc
Q 039912 101 VVGDIN-DGALKRISYAC 117 (198)
Q Consensus 101 VVGd~~-~~~L~R~AD~~ 117 (198)
+|||+. |-...+.|.+.
T Consensus 150 ~iGD~~~Di~~a~~aG~~ 167 (206)
T 1rku_A 150 AAGDSYNDTTMLSEAHAG 167 (206)
T ss_dssp EEECSSTTHHHHHHSSEE
T ss_pred EEeCChhhHHHHHhcCcc
Confidence 999964 22334455543
No 251
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=42.85 E-value=32 Score=30.01 Aligned_cols=69 Identities=10% Similarity=0.056 Sum_probs=44.3
Q ss_pred chhHhhhcceEEE---ecCCCcchHHHHHHHHHHHHhhc--CccEEEEEeCCcchHHHHHHHHhcCCcE--EEE-ccCC
Q 039912 36 LIGELKRGGLWVR---TASDKPQATDVLLRNHLVITHKR--RIEYLVVVSDDSDFVEVLLEANLRCLKT--VVV-GDIN 106 (198)
Q Consensus 36 La~ELrRAGv~Vr---tVsdKPqAAD~ALkrhm~~m~~~--gv~clvLVSDdsdF~~~Lr~Ar~r~l~T--VVV-Gd~~ 106 (198)
+..++++.|+-|- +++..+...| ....+..+... .+.-|++.++..+...+++.|++.|+.. +.| ++..
T Consensus 217 ~~~~~~~~Gi~v~~~~~i~~~~~~~d--~~~~l~~i~~~~~~a~vii~~~~~~~~~~l~~~~~~~g~~~k~~~i~s~~w 293 (496)
T 3ks9_A 217 FKELAAQEGLSIAHSDKIYSNAGEKS--FDRLLRKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGW 293 (496)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCCHHH--HHHHHHHHHTTTTTTCEEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTT
T ss_pred HHHHHHHcCceEEEEEEECCCCCHHH--HHHHHHHHHhccCceEEEEEecChHHHHHHHHHHHHhCCCCcEEEEEechh
Confidence 3467788898765 4443344433 33444444332 6677777788788999999999999873 444 4544
No 252
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=42.75 E-value=25 Score=30.57 Aligned_cols=75 Identities=20% Similarity=0.123 Sum_probs=44.3
Q ss_pred hhHhhhcc-eEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEeC---Ccch---HHHHHHHHhcCCcEEE-EccCCC
Q 039912 37 IGELKRGG-LWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVSD---DSDF---VEVLLEANLRCLKTVV-VGDIND 107 (198)
Q Consensus 37 a~ELrRAG-v~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVSD---dsdF---~~~Lr~Ar~r~l~TVV-VGd~~~ 107 (198)
..+|++-| =.|=.|.|.+.....-+...+. ++.+.|+++.+ .++ ++.+ ..+++.+++.+...|| ||.++-
T Consensus 35 ~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~-f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 113 (407)
T 1vlj_A 35 GEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVE-VSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSV 113 (407)
T ss_dssp HHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEE-ECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred HHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEE-ecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhH
Confidence 44566666 4566677866544322333343 66567888764 344 5444 4556677888888777 788653
Q ss_pred ccccc
Q 039912 108 GALKR 112 (198)
Q Consensus 108 ~~L~R 112 (198)
..+++
T Consensus 114 iD~AK 118 (407)
T 1vlj_A 114 VDSAK 118 (407)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
No 253
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=42.75 E-value=46 Score=26.14 Aligned_cols=66 Identities=15% Similarity=0.083 Sum_probs=44.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+...+. +...+ ...|..+.++..|=++...+-+...+. .+..+|-
T Consensus 24 G~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 94 (264)
T 3ucx_A 24 GTTLARRCAEQGADLVLAARTVERLED-VAKQV---TDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVIN 94 (264)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH---HHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEE
T ss_pred HHHHHHHHHHCcCEEEEEeCCHHHHHH-HHHHH---HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 667889999999999877665554433 33333 245778888888888877766555442 5666654
No 254
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=42.69 E-value=15 Score=30.27 Aligned_cols=66 Identities=12% Similarity=-0.077 Sum_probs=41.9
Q ss_pred hhHhhhcceEEEecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCC-cchHHHHHHHHhcCCcEEEEcc
Q 039912 37 IGELKRGGLWVRTASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDD-SDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 37 a~ELrRAGv~VrtVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDd-sdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
...|++.|+-|-.... .|...| +...+..+...+.+.|++.+-. .+...+++.+++.|+...++|.
T Consensus 185 ~~~~~~~g~~vv~~~~~~~~~~d--~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (419)
T 3h5l_A 185 RDGAGEYGYDVSLFETVAIPVSD--WGPTLAKLRADPPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQ 252 (419)
T ss_dssp HHHGGGGTCEEEEEEECCSSCSC--CHHHHHHHHHSCCSEEEECCCCHHHHHHHHHHHTTSCCSCEEEEC
T ss_pred HHHHHHcCCeEEEEecCCCCCcc--HHHHHHHHHhcCCCEEEEccccCchHHHHHHHHHHcCCCceEEec
Confidence 3466778877743221 122222 2223334446688888877554 5789999999999998887764
No 255
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=41.90 E-value=36 Score=28.14 Aligned_cols=79 Identities=6% Similarity=-0.073 Sum_probs=40.2
Q ss_pred hHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh--cCCcEEEEccCCCccccchh
Q 039912 38 GELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL--RCLKTVVVGDINDGALKRIS 114 (198)
Q Consensus 38 ~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~--r~l~TVVVGd~~~~~L~R~A 114 (198)
..|+++|+.+... +..|.-|-...+ .+. .+.++||.+.-|--+.++++-... .++.--+|=-++...|.|.-
T Consensus 33 ~~l~~~~~~~~~~~t~~~~~a~~~~~----~~~-~~~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~Gt~N~~ar~l 107 (304)
T 3s40_A 33 PPLAAAFPDLHILHTKEQGDATKYCQ----EFA-SKVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGGTCNDFSRTL 107 (304)
T ss_dssp HHHHHHCSEEEEEECCSTTHHHHHHH----HHT-TTCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHHT
T ss_pred HHHHHcCCeEEEEEccCcchHHHHHH----Hhh-cCCCEEEEEccchHHHHHHHHHhhCCCCCcEEEecCCcHHHHHHHc
Confidence 3466677665533 333432222222 222 377778778887777777776655 33333333333333566654
Q ss_pred cccccHH
Q 039912 115 YACFSWW 121 (198)
Q Consensus 115 D~~fsW~ 121 (198)
.+.-++.
T Consensus 108 g~~~~~~ 114 (304)
T 3s40_A 108 GVPQNIA 114 (304)
T ss_dssp TCCSSHH
T ss_pred CCCccHH
Confidence 4444444
No 256
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=41.81 E-value=20 Score=26.88 Aligned_cols=72 Identities=17% Similarity=0.246 Sum_probs=44.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchH-----------HHHH-HHHHHHHhhcCccEEEEEeCCcc----------hHHHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQAT-----------DVLL-RNHLVITHKRRIEYLVVVSDDSD----------FVEVLL 90 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAA-----------D~AL-krhm~~m~~~gv~clvLVSDdsd----------F~~~Lr 90 (198)
|..|+.+|.+.|..|..+...|... |..= ...+..+. .++|.||....... -..+++
T Consensus 13 G~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~ 91 (219)
T 3dqp_A 13 GKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQL-HGMDAIINVSGSGGKSLLKVDLYGAVKLMQ 91 (219)
T ss_dssp HHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTT-TTCSEEEECCCCTTSSCCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHH-cCCCEEEECCcCCCCCcEeEeHHHHHHHHH
Confidence 5668888989998888666555421 2111 22333222 37999887665432 346889
Q ss_pred HHHhcCCcEEE-EccC
Q 039912 91 EANLRCLKTVV-VGDI 105 (198)
Q Consensus 91 ~Ar~r~l~TVV-VGd~ 105 (198)
.|++.+++.+| ++..
T Consensus 92 a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 92 AAEKAEVKRFILLSTI 107 (219)
T ss_dssp HHHHTTCCEEEEECCT
T ss_pred HHHHhCCCEEEEECcc
Confidence 99999997666 4543
No 257
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=41.73 E-value=78 Score=25.46 Aligned_cols=34 Identities=18% Similarity=0.029 Sum_probs=23.8
Q ss_pred hhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 69 HKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 69 ~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
...+.|+| |+|...|...+ .|+..|+..|.+.-.
T Consensus 111 ~~~~PD~V--v~~~~~~~~~~-aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 111 EAWRPSVL--LVDVCALIGRV-LGGLLDLPVVLHRWG 144 (391)
T ss_dssp HHHCCSEE--EEETTCHHHHH-HHHHTTCCEEEECCS
T ss_pred HhcCCCEE--EeCcchhHHHH-HHHHhCCCEEEEecC
Confidence 34577855 44667777665 788899999988744
No 258
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=41.72 E-value=58 Score=26.90 Aligned_cols=63 Identities=14% Similarity=0.146 Sum_probs=44.8
Q ss_pred hccCCCCCCC-----chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHH
Q 039912 26 AVLTPEVGNG-----LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLE 91 (198)
Q Consensus 26 ~lltPkvgyG-----La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~ 91 (198)
.++.|-+.|| .+.+... |-=|++=.|...-..|..-+.++...|+..||+|..+=.=..+|+.
T Consensus 62 ~lv~P~i~yG~~~~~~s~~h~~---fPGTisl~~~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~ 129 (260)
T 1v7z_A 62 ALVMPGLQYGYKSQQKSGGGNH---FPGTTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVE 129 (260)
T ss_dssp CEECCCBCCCBCCCHHHHSCTT---SSSCBCBCHHHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHH
T ss_pred CEEECCccccCCCCCCCccccC---CCceEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHH
Confidence 4899999999 7766542 1227777777664455544449989999999999998654444444
No 259
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=41.72 E-value=28 Score=29.10 Aligned_cols=45 Identities=20% Similarity=0.238 Sum_probs=38.1
Q ss_pred cEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 74 EYLVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 74 ~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
+++|.+|-.-.=.++++.++....++|.|-+. ++.|.+.||..+.
T Consensus 81 dlvI~iS~SG~T~e~l~a~~~aka~viaIT~~-~S~La~~ad~~l~ 125 (325)
T 2e5f_A 81 ELAVGISRSGETTEILLALEKINVKKLGITTR-ESSLTRMCDYSLV 125 (325)
T ss_dssp SEEEEECSSSCCHHHHHHHHTCCSCEEEEESS-SCHHHHHSSEEEE
T ss_pred eEEEEEeCCCCCHHHHHHHHHhCCCEEEEECC-CCHHHHhcCEEEe
Confidence 68888998888888888888744999999888 7899999998764
No 260
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=41.57 E-value=77 Score=26.33 Aligned_cols=74 Identities=11% Similarity=0.139 Sum_probs=51.6
Q ss_pred hccCCCCCCCc-hhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc--hHHHHHHHHhc--CCcEE
Q 039912 26 AVLTPEVGNGL-IGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD--FVEVLLEANLR--CLKTV 100 (198)
Q Consensus 26 ~lltPkvgyGL-a~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd--F~~~Lr~Ar~r--~l~TV 100 (198)
-++.|.++||. +.+...- -=|++=.|+..-..|..-+.++...|+..||+|..+-. +..+.|+.+.+ ++..+
T Consensus 66 ~lv~P~i~yG~~s~~h~~f---PGTisl~~~tl~~~l~di~~sl~~~G~rrlvivNgHGGN~l~~a~~~l~~~~~~~~v~ 142 (254)
T 3lub_A 66 CMVMPPVPFGAHNPGQREL---PFCIHTRYATQQAILEDIVSSLHVQGFRKLLILSGHGGNNFKGMIRDLAFEYPDFLIA 142 (254)
T ss_dssp EEECCCBCCBCCCTTTTTS---TTCCBCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCTTCCCHHHHHHHHHHCTTCEEE
T ss_pred EEEeCCccccCCCccccCc---CCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHHHHCCCcEEE
Confidence 47899999999 8876432 22777777766444544444998999999999996533 66777777766 45444
Q ss_pred EE
Q 039912 101 VV 102 (198)
Q Consensus 101 VV 102 (198)
.+
T Consensus 143 ~~ 144 (254)
T 3lub_A 143 AA 144 (254)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 261
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.42 E-value=49 Score=25.84 Aligned_cols=66 Identities=15% Similarity=0.002 Sum_probs=45.3
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..+|.+|.+.|..|-.+...++... .+...+. ..|..+.++..|=++...+-+...+ -.+..||-
T Consensus 42 G~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 112 (262)
T 3rkr_A 42 GAAIARKLGSLGARVVLTARDVEKLR-AVEREIV---AAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVN 112 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHH---HTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHH---HhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 67789999999999987766555443 3344333 4577788888888887776665544 25766664
No 262
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=41.31 E-value=48 Score=26.47 Aligned_cols=66 Identities=12% Similarity=0.133 Sum_probs=41.5
Q ss_pred CCCchhHhhhcceEEEecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+.. .+...+ .+...+. ..|..+.++..|=++...+-+... ++ .+..||-
T Consensus 42 G~aia~~la~~G~~V~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 113 (280)
T 4da9_A 42 GLGIARALAASGFDIAITGIGDAEGVA-PVIAELS---GLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVN 113 (280)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCHHHHH-HHHHHHH---HTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHHH---hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66789999999999987653 333332 3333333 457778888777777665544443 32 6766653
No 263
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=41.29 E-value=59 Score=24.53 Aligned_cols=66 Identities=15% Similarity=0.116 Sum_probs=40.7
Q ss_pred CCCchhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..++.+|.+.|..|..+ ...|...+ .+.+.+. ..+....++..|=++...+-+...+. ++..||-
T Consensus 14 G~~la~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 85 (244)
T 1edo_A 14 GKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIE---AYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVN 85 (244)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHH---HHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHH---hcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999874 44444332 3334333 23556667777877766655544431 5666653
No 264
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=41.28 E-value=29 Score=33.68 Aligned_cols=48 Identities=13% Similarity=0.078 Sum_probs=36.7
Q ss_pred cCccEEEEEeCC-----cchHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 71 RRIEYLVVVSDD-----SDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 71 ~gv~clvLVSDd-----sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
..-+|||++--+ ......|+.||++|.+.|||.=.- ......||.|++
T Consensus 245 ~nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr~-t~ta~~AD~wl~ 297 (976)
T 2ivf_A 245 LDAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPDF-NPTTPAADLHVP 297 (976)
T ss_dssp GGCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSSC-CTTGGGCSEEEC
T ss_pred hhCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCCC-CcchhhcCeEec
Confidence 456889988654 345667889999999999996542 457789999985
No 265
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=41.24 E-value=14 Score=28.41 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=38.1
Q ss_pred CchhHhhhcceEEEecC--CCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 35 GLIGELKRGGLWVRTAS--DKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVs--dKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
|+..++++.|+.+.... +.|+.. . . .+++-|++.+-+.+ .+.++.+++.++..|+++..
T Consensus 29 gi~~~a~~~g~~~~~~~~~~~~~~~-----~---~---~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 89 (277)
T 3cs3_A 29 GIKKGLALFDYEMIVCSGKKSHLFI-----P---E---KMVDGAIILDWTFP-TKEIEKFAERGHSIVVLDRT 89 (277)
T ss_dssp HHHHHHHTTTCEEEEEESTTTTTCC-----C---T---TTCSEEEEECTTSC-HHHHHHHHHTTCEEEESSSC
T ss_pred HHHHHHHHCCCeEEEEeCCCCHHHH-----h---h---ccccEEEEecCCCC-HHHHHHHHhcCCCEEEEecC
Confidence 56677788888776433 222211 0 0 18899888875544 36777788889988888754
No 266
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=40.94 E-value=33 Score=27.33 Aligned_cols=34 Identities=6% Similarity=0.185 Sum_probs=29.4
Q ss_pred cCccEEEEEeCCcc---hHHHHHHHHhcCCcEEEEcc
Q 039912 71 RRIEYLVVVSDDSD---FVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 71 ~gv~clvLVSDdsd---F~~~Lr~Ar~r~l~TVVVGd 104 (198)
.--|+++++|-... -.++...|+++|+.+|+|-.
T Consensus 76 ~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 76 HAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 46689999997665 77888999999999999988
No 267
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=40.77 E-value=46 Score=25.87 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=46.4
Q ss_pred CchhHhhh-cceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEeC-------CcchHHHHHHHHhcCCcE
Q 039912 35 GLIGELKR-GGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVSD-------DSDFVEVLLEANLRCLKT 99 (198)
Q Consensus 35 GLa~ELrR-AGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVSD-------dsdF~~~Lr~Ar~r~l~T 99 (198)
|-+.-|++ +|+.|+.|..-|.--| -|+. .+.+..|+.||-..| +.|=..+.|.|-+.++-.
T Consensus 39 gTa~~L~e~~Gl~v~~v~k~~~eG~----p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~ 108 (134)
T 2xw6_A 39 TTGRRIEEATGLTVEKLLSGPLGGD----QQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPL 108 (134)
T ss_dssp HHHHHHHHHHCCCCEECSCGGGTHH----HHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhhCceEEEEEecCCCCc----chHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCe
Confidence 44678999 9999999987673333 2566 455777999999888 567788999998887754
No 268
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=40.70 E-value=15 Score=29.43 Aligned_cols=20 Identities=25% Similarity=0.280 Sum_probs=15.6
Q ss_pred CchhHhhhcceEEEecCCCc
Q 039912 35 GLIGELKRGGLWVRTASDKP 54 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKP 54 (198)
.+...|+++|+.|..+|.--
T Consensus 148 e~i~~l~~~gi~v~ivSgg~ 167 (297)
T 4fe3_A 148 NFFGKLQQHGIPVFIFSAGI 167 (297)
T ss_dssp HHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHHHcCCeEEEEeCCc
Confidence 45678899999999888643
No 269
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=40.58 E-value=31 Score=33.84 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=26.7
Q ss_pred cchHHHHHHHHhcCCcEEEEccC-CCccccchhccccc
Q 039912 83 SDFVEVLLEANLRCLKTVVVGDI-NDGALKRISYACFS 119 (198)
Q Consensus 83 sdF~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~~fs 119 (198)
.+-..+++..+++|-.+.+|||+ ||-..=+.||+++.
T Consensus 701 ~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIA 738 (1028)
T 2zxe_A 701 QQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 738 (1028)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEE
Confidence 34566777888888889999994 45444467898874
No 270
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=40.54 E-value=6.3 Score=29.62 Aligned_cols=37 Identities=3% Similarity=-0.069 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcE
Q 039912 62 RNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKT 99 (198)
Q Consensus 62 krhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~T 99 (198)
...+.....+|+..+++ |--..=.++++.||+.|++-
T Consensus 72 ~~~v~e~~~~g~k~v~~-~~G~~~~e~~~~a~~~Girv 108 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIF-NPGTENEELEEILSENGIEP 108 (122)
T ss_dssp GGGHHHHHHHCCSEEEE-CTTCCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhcCCCEEEE-CCCCChHHHHHHHHHcCCeE
Confidence 34444555778887554 43333368888999999873
No 271
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=40.29 E-value=89 Score=21.57 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=36.4
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc---EEEEEeCCc-----chHHHHHHHHhcCCc---EEEEcc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE---YLVVVSDDS-----DFVEVLLEANLRCLK---TVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~---clvLVSDds-----dF~~~Lr~Ar~r~l~---TVVVGd 104 (198)
+-..|++.|+.+-.++..+...-..+ ++ .|+. ..++.|++. +-..+.+.+++.|+. +++|||
T Consensus 93 ~l~~l~~~g~~~~i~s~~~~~~~~~~-~~------~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD 165 (207)
T 2go7_A 93 VLAWADESGIQQFIYTHKGNNAFTIL-KD------LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGD 165 (207)
T ss_dssp HHHHHHHTTCEEEEECSSCTHHHHHH-HH------HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHCCCeEEEEeCCchHHHHHH-HH------cCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECC
Confidence 44567888998888888776431222 21 1332 234444432 233344555666664 899999
Q ss_pred CC
Q 039912 105 IN 106 (198)
Q Consensus 105 ~~ 106 (198)
+.
T Consensus 166 ~~ 167 (207)
T 2go7_A 166 RT 167 (207)
T ss_dssp SH
T ss_pred CH
Confidence 63
No 272
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=40.12 E-value=73 Score=25.06 Aligned_cols=70 Identities=13% Similarity=0.042 Sum_probs=44.4
Q ss_pred CCCchhHhhhcceEEEecCCCcc--------hHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQ--------ATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKT 99 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPq--------AAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~T 99 (198)
|..+|..|.+.|..|-.+...+. +....+......+...|..+.++..|=++...+-+...+. ++..
T Consensus 23 G~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 102 (281)
T 3s55_A 23 GRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDI 102 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred HHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 66789999999999976544321 1122333333334456788888888888877765555442 6776
Q ss_pred EEE
Q 039912 100 VVV 102 (198)
Q Consensus 100 VVV 102 (198)
+|-
T Consensus 103 lv~ 105 (281)
T 3s55_A 103 AIT 105 (281)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 273
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=40.03 E-value=69 Score=25.56 Aligned_cols=56 Identities=16% Similarity=0.058 Sum_probs=34.0
Q ss_pred HHHHHHHHHhhcC-----ccEEEEEeCCc-----chHHHHHHHHhcCCcEEEEccCC--C-ccccchhc
Q 039912 60 LLRNHLVITHKRR-----IEYLVVVSDDS-----DFVEVLLEANLRCLKTVVVGDIN--D-GALKRISY 115 (198)
Q Consensus 60 ALkrhm~~m~~~g-----v~clvLVSDds-----dF~~~Lr~Ar~r~l~TVVVGd~~--~-~~L~R~AD 115 (198)
||...+..+...+ ..-|||+||-. +....++.++..|+...+||-+. + ..|...|.
T Consensus 111 aL~~a~~~l~~~~~r~~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~ 179 (281)
T 4hqf_A 111 ALLQVRKHLNDRINRENANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVG 179 (281)
T ss_dssp HHHHHHHHHHTSCCCTTCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhC
Confidence 4544444443332 34599999853 56778888888998866666543 2 33455553
No 274
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=39.87 E-value=55 Score=25.38 Aligned_cols=67 Identities=16% Similarity=-0.026 Sum_probs=42.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++.... +..++.. ..+..+.++..|=++...+-+...+. .+..||-
T Consensus 36 G~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 107 (266)
T 3o38_A 36 GSTTARRALLEGADVVISDYHERRLGE-TRDQLAD--LGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVN 107 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHT--TCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEecCCHHHHHH-HHHHHHh--cCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 445678888999999877666554433 3333331 23456778888888877766555543 6766664
No 275
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=39.72 E-value=34 Score=26.62 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=42.3
Q ss_pred CCCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc--CCcEEEE
Q 039912 32 VGNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR--CLKTVVV 102 (198)
Q Consensus 32 vgyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r--~l~TVVV 102 (198)
.|..+|..|.+.|..|-.+...+...+. +.. +. ..|.++..+ |..+...++..+.++ ++..||-
T Consensus 13 IG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~-l~---~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 13 GGMGSALRLSEAGHTVACHDESFKQKDE-LEA-FA---ETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp THHHHHHHHHHTTCEEEECCGGGGSHHH-HHH-HH---HHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH-HH---hcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 3667889999999999887666655443 222 33 235555544 777888888877664 5665554
No 276
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=39.61 E-value=23 Score=27.74 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=21.1
Q ss_pred HHHHHHHhcCC---cEEEEccC-CCccccchhcccccH
Q 039912 87 EVLLEANLRCL---KTVVVGDI-NDGALKRISYACFSW 120 (198)
Q Consensus 87 ~~Lr~Ar~r~l---~TVVVGd~-~~~~L~R~AD~~fsW 120 (198)
.+...+++.|+ .+++|||+ +|-...+.|.+.+-|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 215 IVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred HHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE
Confidence 34445555676 58999994 344456666655554
No 277
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=39.48 E-value=33 Score=26.73 Aligned_cols=19 Identities=16% Similarity=0.004 Sum_probs=9.7
Q ss_pred chHHHHHHHHhcCCcEEEE
Q 039912 84 DFVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 84 dF~~~Lr~Ar~r~l~TVVV 102 (198)
.|...|+.|.+-|.++|+|
T Consensus 85 ~~~~~i~~A~~lGa~~v~~ 103 (264)
T 1yx1_A 85 ELEPTLRRAEACGAGWLKV 103 (264)
T ss_dssp THHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 3445555555555555544
No 278
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=39.42 E-value=54 Score=25.69 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=43.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+ .+..++. ..|..+..+..|=++...+-+...+ + .+..+|-
T Consensus 25 G~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~ 95 (256)
T 3gaf_A 25 GRAIAGTFAKAGASVVVTDLKSEGAE-AVAAAIR---QAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVN 95 (256)
T ss_dssp HHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHH---hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66789999999999987666555443 3344343 4577788888888887665554443 2 6665553
No 279
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=39.36 E-value=53 Score=27.48 Aligned_cols=23 Identities=13% Similarity=0.042 Sum_probs=13.4
Q ss_pred cCccEEEEEeCCcchHHHHHHHH
Q 039912 71 RRIEYLVVVSDDSDFVEVLLEAN 93 (198)
Q Consensus 71 ~gv~clvLVSDdsdF~~~Lr~Ar 93 (198)
.+.++||.+.-|=-+..+++...
T Consensus 81 ~~~d~vvv~GGDGTl~~v~~~l~ 103 (332)
T 2bon_A 81 FGVATVIAGGGDGTINEVSTALI 103 (332)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHH
T ss_pred cCCCEEEEEccchHHHHHHHHHh
Confidence 35566666666666666555554
No 280
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=39.18 E-value=45 Score=26.27 Aligned_cols=67 Identities=13% Similarity=0.008 Sum_probs=42.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+. ..+.. ..|..+.++..|=++...+-+.+. ++ ++..+|-
T Consensus 33 G~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~l~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 104 (266)
T 4egf_A 33 GADIARAFAAAGARLVLSGRDVSELDAAR-RALGE--QFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVN 104 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHH--HHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66788999999999987766666554433 33332 136677777777776665544443 32 6776664
No 281
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=39.13 E-value=61 Score=23.83 Aligned_cols=62 Identities=15% Similarity=0.155 Sum_probs=36.3
Q ss_pred hhHhhhcceEEEecCCCcchH-HHHHHHHHHHHhhcCccE---EEEEeC---CcchHHHHHHHHhcCC---cEEEEccCC
Q 039912 37 IGELKRGGLWVRTASDKPQAT-DVLLRNHLVITHKRRIEY---LVVVSD---DSDFVEVLLEANLRCL---KTVVVGDIN 106 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqAA-D~ALkrhm~~m~~~gv~c---lvLVSD---dsdF~~~Lr~Ar~r~l---~TVVVGd~~ 106 (198)
-..|+. |+.+-.++.+|... ...|+ ..|+.. .++.|+ -++=..++..+++.|+ .+++|||+.
T Consensus 93 l~~L~~-~~~l~i~T~~~~~~~~~~l~-------~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~ 164 (210)
T 2ah5_A 93 LEELSS-SYPLYITTTKDTSTAQDMAK-------NLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTK 164 (210)
T ss_dssp HHHHHT-TSCEEEEEEEEHHHHHHHHH-------HTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred HHHHHc-CCeEEEEeCCCHHHHHHHHH-------hcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCH
Confidence 356777 98887888887643 22222 234431 344555 2333445555666777 499999963
No 282
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=39.12 E-value=13 Score=28.84 Aligned_cols=66 Identities=11% Similarity=0.078 Sum_probs=34.5
Q ss_pred hhHhhhcceEEEecCCCcch-HHHHHHHHHHHHhhc---CccEEEEEeC-CcchHHHHHHHHhcCCcEEEEccC
Q 039912 37 IGELKRGGLWVRTASDKPQA-TDVLLRNHLVITHKR---RIEYLVVVSD-DSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqA-AD~ALkrhm~~m~~~---gv~clvLVSD-dsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
-.+|++.|+.+-.++.+|.. +...++. +...... +.+.. .+.. -++=..+++.+++.|+ +++|||.
T Consensus 97 l~~L~~~G~~l~ivTn~~~~~~~~~l~~-l~~~f~~i~~~~~~~-~~~~~KP~p~~~~~~~~~~g~-~l~VGDs 167 (211)
T 2b82_A 97 IDMHVRRGDAIFFVTGRSPTKTETVSKT-LADNFHIPATNMNPV-IFAGDKPGQNTKSQWLQDKNI-RIFYGDS 167 (211)
T ss_dssp HHHHHHHTCEEEEEECSCCCSSCCHHHH-HHHHTTCCTTTBCCC-EECCCCTTCCCSHHHHHHTTE-EEEEESS
T ss_pred HHHHHHCCCEEEEEcCCcHHHHHHHHHH-HHHhcCccccccchh-hhcCCCCCHHHHHHHHHHCCC-EEEEECC
Confidence 45788999999888888763 2223333 3321111 11111 1111 1111223455566778 9999996
No 283
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=38.96 E-value=49 Score=24.55 Aligned_cols=18 Identities=11% Similarity=0.250 Sum_probs=13.1
Q ss_pred chhHhhhcceEEEecCCC
Q 039912 36 LIGELKRGGLWVRTASDK 53 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdK 53 (198)
+-.+|++.|+.+-.+|..
T Consensus 50 ~L~~L~~~G~~l~i~Tn~ 67 (176)
T 2fpr_A 50 QLLKLQKAGYKLVMITNQ 67 (176)
T ss_dssp HHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEECC
Confidence 345677788888777776
No 284
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=38.92 E-value=13 Score=30.34 Aligned_cols=41 Identities=12% Similarity=0.129 Sum_probs=32.6
Q ss_pred HHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc---EEEEcc
Q 039912 64 HLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK---TVVVGD 104 (198)
Q Consensus 64 hm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~---TVVVGd 104 (198)
.+..+...+.+-|++.+...+...+++.|++.|+. .+.|+-
T Consensus 207 ~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~ 250 (384)
T 3qek_A 207 LLLEAKELEARVIILSASEDDATAVYKSAAMLDMTGAGYVWLVG 250 (384)
T ss_dssp HHHHHHTSSCCEEEEECCHHHHHHHHHHHHHTTCSSTTCEEECC
T ss_pred HHHHHHhcCCcEEEEECCHHHHHHHHHHHHHcCCccCCeEEEEe
Confidence 33344467899999999999999999999999997 555543
No 285
>1q16_A Respiratory nitrate reductase 1 alpha chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 3ir7_A* 1y5i_A* 1siw_A* 1y4z_A* 1r27_A* 1y5l_A* 1y5n_A* 3ir6_A* 3ir5_A* 3egw_A*
Probab=38.84 E-value=24 Score=36.20 Aligned_cols=48 Identities=13% Similarity=0.132 Sum_probs=37.1
Q ss_pred CccEEEEEeCCc-----chHHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 72 RIEYLVVVSDDS-----DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 72 gv~clvLVSDds-----dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
.-+|||++--+. -....|..||++|.+.|||.=.- ....+.||+|++=
T Consensus 246 ~ad~iv~wGsN~~~t~~~~~~~l~~ar~~G~KvVvIDPr~-t~ta~~AD~wl~i 298 (1247)
T 1q16_A 246 NSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDY-AEIAKLCDLWLAP 298 (1247)
T ss_dssp GCSEEEEESCCHHHHSGGGHHHHHHHGGGTCEEEEECSSC-CHHHHHSSEEECC
T ss_pred hCCEEEEECCCchhccHHHHHHHHHHHHCCCEEEEEeCCC-CcchhhCCeEEee
Confidence 567899997764 34457889999999999997543 4578899999873
No 286
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=38.67 E-value=60 Score=25.87 Aligned_cols=69 Identities=12% Similarity=0.084 Sum_probs=42.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHH------------------------HHHHHHhhcCccEEEEEeCCcch---
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLR------------------------NHLVITHKRRIEYLVVVSDDSDF--- 85 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALk------------------------rhm~~m~~~gv~clvLVSDdsdF--- 85 (198)
|.-|+..|.+.|..|..+...|......+. ..+..+.. +++.||-......+
T Consensus 38 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~Vih~A~~~~~~~~ 116 (351)
T 3ruf_A 38 GSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-GVDHVLHQAALGSVPRS 116 (351)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-TCSEEEECCCCCCHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-CCCEEEECCccCCcchh
Confidence 456889999999999876554432211111 11222223 88988877654321
Q ss_pred ---------------HHHHHHHHhcCCcEEEE
Q 039912 86 ---------------VEVLLEANLRCLKTVVV 102 (198)
Q Consensus 86 ---------------~~~Lr~Ar~r~l~TVVV 102 (198)
..+|+.|++.+++.+|.
T Consensus 117 ~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~ 148 (351)
T 3ruf_A 117 IVDPITTNATNITGFLNILHAAKNAQVQSFTY 148 (351)
T ss_dssp HHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 23789999999965553
No 287
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=38.54 E-value=51 Score=26.03 Aligned_cols=63 Identities=19% Similarity=-0.006 Sum_probs=42.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++....+... + |..+.++..|=++...+-+...+. .+..+|-
T Consensus 24 G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 91 (271)
T 3tzq_B 24 GLETSRVLARAGARVVLADLPETDLAGAAAS----V---GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDN 91 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTSCHHHHHHH----H---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----h---CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998766665554333322 1 566777888888877766555542 6766654
No 288
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=38.30 E-value=75 Score=23.03 Aligned_cols=55 Identities=7% Similarity=-0.067 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC--cEEEEccCCCccccchhcc
Q 039912 60 LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL--KTVVVGDINDGALKRISYA 116 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l--~TVVVGd~~~~~L~R~AD~ 116 (198)
.|.++...+..+|+..++-||-|+.+ .+-+.+++.++ ..-++.|.+ +.+.+.-.+
T Consensus 58 ~l~~~~~~~~~~~v~~vv~Is~d~~~-~~~~~~~~~~~~~~~~~l~D~~-~~~~~~~gv 114 (162)
T 1tp9_A 58 GFIEKAGELKSKGVTEILCISVNDPF-VMKAWAKSYPENKHVKFLADGS-ATYTHALGL 114 (162)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSCHH-HHHHHHHTCTTCSSEEEEECTT-SHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCHH-HHHHHHHhcCCCCCeEEEECCC-chHHHHcCc
Confidence 45565556666899867777766544 46677888889 678888865 555554333
No 289
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=38.29 E-value=57 Score=23.30 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=21.6
Q ss_pred hcC-ccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 70 KRR-IEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 70 ~~g-v~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
..| ++.+++ ... +.++++..++.+.+.+|+|.-
T Consensus 61 ~~~~~d~v~~-~~~--~~~~~~~~~~~~~~~iv~G~D 94 (132)
T 2b7l_A 61 SIRYVDLVIP-EKG--WGQKEDDVEKFDVDVFVMGHD 94 (132)
T ss_dssp TBTTCCEEEE-ECC--GGGHHHHHHHTTCCEEEECGG
T ss_pred hcCCCCEEEE-CCC--hHHHHHHHHHcCCCEEEECCC
Confidence 455 887765 222 224455567889999999974
No 290
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=38.15 E-value=65 Score=24.61 Aligned_cols=63 Identities=11% Similarity=-0.014 Sum_probs=40.3
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..++..|.+.|..|..+...++..+.+. ++ + +..+.++..|=++...+-+...+. .+..||-
T Consensus 25 G~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~---~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 92 (265)
T 2o23_A 25 GLATAERLVGQGASAVLLDLPNSGGEAQA-KK---L---GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN 92 (265)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTSSHHHHH-HH---H---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCcHhHHHHH-HH---h---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 67789999999999987766665543332 22 1 455667777777766655544432 6766663
No 291
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=38.12 E-value=87 Score=23.81 Aligned_cols=66 Identities=11% Similarity=0.032 Sum_probs=40.5
Q ss_pred chhHhhhcceEEEecCC--------------Cc---chHHHHHHHHHHHHhhcCccEEEEEeCCc---------------
Q 039912 36 LIGELKRGGLWVRTASD--------------KP---QATDVLLRNHLVITHKRRIEYLVVVSDDS--------------- 83 (198)
Q Consensus 36 La~ELrRAGv~VrtVsd--------------KP---qAAD~ALkrhm~~m~~~gv~clvLVSDds--------------- 83 (198)
+...|++.|+.+-.+.- .| +.+-..+++.+......|+.+|++.+...
T Consensus 45 ~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~ 124 (260)
T 1k77_A 45 IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFID 124 (260)
T ss_dssp HHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHH
T ss_pred HHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHH
Confidence 44567788888764321 12 23445677888877788999988754321
Q ss_pred chHHHHHHHHhcCCcEEEE
Q 039912 84 DFVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 84 dF~~~Lr~Ar~r~l~TVVV 102 (198)
.|..+...|++.|++ +.|
T Consensus 125 ~l~~l~~~a~~~gv~-l~~ 142 (260)
T 1k77_A 125 NIRYAADRFAPHGKR-ILV 142 (260)
T ss_dssp HHHHHHHHHGGGTCE-EEE
T ss_pred HHHHHHHHHHHcCCE-EEE
Confidence 233455667778875 444
No 292
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=38.09 E-value=34 Score=29.30 Aligned_cols=37 Identities=11% Similarity=0.218 Sum_probs=27.7
Q ss_pred HHhhc--CccEEEEEeCCcchHHHHHHHHhcCCcEEE-Ecc
Q 039912 67 ITHKR--RIEYLVVVSDDSDFVEVLLEANLRCLKTVV-VGD 104 (198)
Q Consensus 67 ~m~~~--gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVV-VGd 104 (198)
.+-+. |+.+.+-.++ ..+..-++.|.+.|...+| ||+
T Consensus 349 ~Lr~~~~Gi~v~~d~~~-~~~~~~~~~a~~~g~p~~iiiG~ 388 (423)
T 1htt_A 349 RLRDELPGVKLMTNHGG-GNFKKQFARADKWGARVAVVLGE 388 (423)
T ss_dssp HHHHHSTTCCEEECCSC-CCHHHHHHHHHHHTCSEEEEECH
T ss_pred HHHcCCCCcEEEEeCCC-CCHHHHHHHHHHcCCCEEEEECc
Confidence 44456 8988765543 5799999999999998765 575
No 293
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=38.02 E-value=58 Score=26.10 Aligned_cols=66 Identities=18% Similarity=0.165 Sum_probs=44.3
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+...+. +...+. ..|..+.++..|=++...+-+...+. .+..+|-
T Consensus 17 G~aia~~la~~G~~V~~~~r~~~~~~~-~~~~l~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn 87 (264)
T 3tfo_A 17 GEGIARELGVAGAKILLGARRQARIEA-IATEIR---DAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVN 87 (264)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHH---HTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999877665554433 333333 45778888888888877665554432 6766664
No 294
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=37.92 E-value=91 Score=23.90 Aligned_cols=60 Identities=12% Similarity=0.106 Sum_probs=29.4
Q ss_pred cceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 43 GGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 43 AGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
+.+.+-.|.+.|+.+...|......+...|+..-+.+....--..+++.|++. .-||+|-
T Consensus 183 a~l~ll~v~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~a~~~--dliV~G~ 242 (268)
T 3ab8_A 183 LGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPG--DLLALGA 242 (268)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHCCTT--EEEEEEC
T ss_pred CEEEEEEEcCcHHHHHHHHHHHHHHHHHcCCceEEEEeCCChHHHHHHHHHhC--CEEEECC
Confidence 44555555554444444444433344445555433333333344455555555 6667665
No 295
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=37.81 E-value=72 Score=24.55 Aligned_cols=65 Identities=15% Similarity=0.082 Sum_probs=41.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh------cCCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL------RCLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~------r~l~TVV 101 (198)
|..++.+|.+.|..|..+...+...... ...+. ..+....++..|-++...+-+...+ .++..||
T Consensus 27 G~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li 97 (266)
T 1xq1_A 27 GHAIVEEFAGFGAVIHTCARNEYELNEC-LSKWQ---KKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILI 97 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHH---HTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHH---hcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 6678899999999998776655544332 22222 3466777778888877665554443 3566655
No 296
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=37.55 E-value=55 Score=25.20 Aligned_cols=63 Identities=17% Similarity=0.175 Sum_probs=41.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|.+|.+.|..|-.+...++..+.+.. ..+..+.++..|=++...+-+...+. .+..||-
T Consensus 22 G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 89 (261)
T 3n74_A 22 GEGMAKRFAKGGAKVVIVDRDKAGAERVAG-------EIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVN 89 (261)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-------HhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 677899999999999887665554433322 12556777777877776665554432 6766664
No 297
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=37.53 E-value=9.6 Score=34.29 Aligned_cols=37 Identities=5% Similarity=-0.035 Sum_probs=34.1
Q ss_pred hcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 70 KRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.....|+|...+-.+...+++.|++.+++-+|.|.++
T Consensus 40 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 76 (503)
T 1zr6_A 40 DYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGH 76 (503)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred cCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 4567899999999999999999999999999999876
No 298
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=37.49 E-value=26 Score=25.81 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=16.7
Q ss_pred chhHhhhcceEEEecCCCcch
Q 039912 36 LIGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA 56 (198)
+-..|++.|+.+-.+|..|..
T Consensus 94 ~l~~L~~~g~~~~i~T~~~~~ 114 (225)
T 1nnl_A 94 LVSRLQERNVQVFLISGGFRS 114 (225)
T ss_dssp HHHHHHHTTCEEEEEEEEEHH
T ss_pred HHHHHHHCCCcEEEEeCChHH
Confidence 455678899999999998864
No 299
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=37.45 E-value=40 Score=32.80 Aligned_cols=47 Identities=4% Similarity=-0.036 Sum_probs=35.7
Q ss_pred CccEEEEEeCCc-----chHHHHHHHHhcCCcEEEEccCCCccccchhccccc
Q 039912 72 RIEYLVVVSDDS-----DFVEVLLEANLRCLKTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 72 gv~clvLVSDds-----dF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fs 119 (198)
.-+|||++.-+. .....++.||++|.+.|||.=.- ...+..||+|++
T Consensus 184 ~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr~-t~ta~~AD~~l~ 235 (977)
T 1h0h_A 184 NSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPRY-TRTSTKCDLYAP 235 (977)
T ss_dssp GCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSSC-CTTGGGCSEEEC
T ss_pred hCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCCC-CchhHHhCeeec
Confidence 467898887553 34456788999999999997653 567889999875
No 300
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.41 E-value=87 Score=24.38 Aligned_cols=70 Identities=20% Similarity=0.007 Sum_probs=44.3
Q ss_pred CCCchhHhhhcceEEEecCCCcc--------hHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQ--------ATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKT 99 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPq--------AAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~T 99 (198)
|..+|..|.+.|..|-.+...+. +....+......+...|..+.++..|=++...+-+...+. .+..
T Consensus 23 G~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 102 (287)
T 3pxx_A 23 GRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDV 102 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred HHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 67789999999999976543211 1122333333333356778888888988887776555442 6766
Q ss_pred EEE
Q 039912 100 VVV 102 (198)
Q Consensus 100 VVV 102 (198)
||-
T Consensus 103 lv~ 105 (287)
T 3pxx_A 103 VVA 105 (287)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 301
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=37.26 E-value=66 Score=24.62 Aligned_cols=57 Identities=25% Similarity=0.178 Sum_probs=36.3
Q ss_pred CCCchhHhhhcceEEEecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH
Q 039912 33 GNGLIGELKRGGLWVRTASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN 93 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar 93 (198)
|..++..|.+.|..|..+.. .+... ..+..++. ..|..+.++..|=++...+-+...
T Consensus 34 G~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 34 GRGIAIELGRRGASVVVNYGSSSKAA-EEVVAELK---KLGAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHH---HTTCCEEEEECCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEcCCchHHH-HHHHHHHH---hcCCcEEEEEecCCCHHHHHHHHH
Confidence 55688899999999887655 33333 23334333 346677777788777766555444
No 302
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=37.24 E-value=73 Score=24.67 Aligned_cols=64 Identities=16% Similarity=0.119 Sum_probs=40.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|..+...+. ..+...+. ..|..+.++..|=++...+-+...+ + ++..||-
T Consensus 17 G~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 85 (255)
T 2q2v_A 17 GLGIAQVLARAGANIVLNGFGDP---APALAEIA---RHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVN 85 (255)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCC---HHHHHHHH---TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCch---HHHHHHHH---hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66788999999999987655444 22333232 3466777777777776665544443 2 6776664
No 303
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=37.19 E-value=66 Score=24.49 Aligned_cols=66 Identities=17% Similarity=0.064 Sum_probs=42.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..++.+|.+.|..|..+...+...+ .+...+. ..+....++..|=++...+-+...+ -++..||-
T Consensus 26 G~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 96 (260)
T 3awd_A 26 GLACVTALAEAGARVIIADLDEAMAT-KAVEDLR---MEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVA 96 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHH---hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66789999999999987765554433 2333333 3455677777887777666554443 26776664
No 304
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=37.14 E-value=81 Score=25.93 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=32.1
Q ss_pred CCCcchHHHHHHHHHHHHhhcCccEEEEEeC-CcchHHHHHHHHhcCCcEEEE
Q 039912 51 SDKPQATDVLLRNHLVITHKRRIEYLVVVSD-DSDFVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 51 sdKPqAAD~ALkrhm~~m~~~gv~clvLVSD-dsdF~~~Lr~Ar~r~l~TVVV 102 (198)
...|.+++. .+=+..+...+|.||+.=+- ++..+..| |++.|++++++
T Consensus 204 ~~eps~~~l--~~l~~~ik~~~v~~if~e~~~~~~~~~~i--a~~~g~~v~~l 252 (284)
T 2prs_A 204 EIQPGAQRL--HEIRTQLVEQKATCVFAEPQFRPAVVESV--ARGTSVRMGTL 252 (284)
T ss_dssp TSCCCHHHH--HHHHHHHHHTTCCEEEECTTSCSHHHHHH--TTTSCCEEEEC
T ss_pred CCCCCHHHH--HHHHHHHHHcCCCEEEEeCCCChHHHHHH--HHHcCCeEEEe
Confidence 356777753 33333455789999877544 45556655 88999998876
No 305
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=37.02 E-value=64 Score=26.49 Aligned_cols=62 Identities=19% Similarity=0.212 Sum_probs=48.6
Q ss_pred CchhHhhh-cceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEeC-------CcchHHHHHHHHhcCCcEE
Q 039912 35 GLIGELKR-GGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVSD-------DSDFVEVLLEANLRCLKTV 100 (198)
Q Consensus 35 GLa~ELrR-AGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVSD-------dsdF~~~Lr~Ar~r~l~TV 100 (198)
|-+.-|++ +|+.|+.|..-|+--|. |+. .+.+..|+.||-..| +.|=..+.|.|-+.++-..
T Consensus 63 gTa~~L~e~~Gl~v~~v~k~~eGG~p----qI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~ 133 (178)
T 1vmd_A 63 TTGALLQEKLGLKVHRLKSGPLGGDQ----QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVA 133 (178)
T ss_dssp HHHHHHHHHHCCCCEECSCGGGTHHH----HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCceeEEEeecCCCCCc----hHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEE
Confidence 45778999 99999999877775442 566 555777999999988 5677889999999888654
No 306
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=37.00 E-value=1.3e+02 Score=22.33 Aligned_cols=69 Identities=13% Similarity=-0.101 Sum_probs=37.7
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcch-----HHHHHHHHhcCCc----EEEEccCC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDF-----VEVLLEANLRCLK----TVVVGDIN 106 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF-----~~~Lr~Ar~r~l~----TVVVGd~~ 106 (198)
+-..|+..|+.+-.++..|...=..+.+++... ..-++. +..|++... ..+...+++.|+. +++|||+.
T Consensus 119 ~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~-~~~~~~-~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~ 196 (277)
T 3iru_A 119 VFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ-GYTPAS-TVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTL 196 (277)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT-TCCCSE-EECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSH
T ss_pred HHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc-cCCCce-EecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCH
Confidence 446688899999999988874322222222211 111333 344444332 2344455555654 69999963
No 307
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=36.93 E-value=58 Score=22.33 Aligned_cols=41 Identities=7% Similarity=-0.139 Sum_probs=29.5
Q ss_pred hcCccE--EEEEeCCcchHHHHHHHHhcCCcEEEEccCCCccccc
Q 039912 70 KRRIEY--LVVVSDDSDFVEVLLEANLRCLKTVVVGDINDGALKR 112 (198)
Q Consensus 70 ~~gv~c--lvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R 112 (198)
..|+.+ ..+.+. +--..+++.|++.+...||+|-. .+.++|
T Consensus 75 ~~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~-~~~~~~ 117 (141)
T 1jmv_A 75 SVDYPISEKLSGSG-DLGQVLSDAIEQYDVDLLVTGHH-QDFWSK 117 (141)
T ss_dssp HSSSCCCCEEEEEE-CHHHHHHHHHHHTTCCEEEEEEC-CCCHHH
T ss_pred HcCCCceEEEEecC-CHHHHHHHHHHhcCCCEEEEeCC-Cchhhh
Confidence 456664 334444 34678999999999999999987 566655
No 308
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=36.92 E-value=41 Score=26.62 Aligned_cols=67 Identities=13% Similarity=-0.016 Sum_probs=41.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVV 102 (198)
|.-|+..|.+.|..|..+...+.....++.+ +... .+....++..|=++...+-+.....++..||-
T Consensus 18 G~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 84 (341)
T 3enk_A 18 GSHTAVELLAHGYDVVIADNLVNSKREAIAR-IEKI--TGKTPAFHETDVSDERALARIFDAHPITAAIH 84 (341)
T ss_dssp HHHHHHHHHHTTCEEEEECCCSSSCTHHHHH-HHHH--HSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCcEEEEecCCcchHHHHHH-HHhh--cCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence 5568899999999998776555544334433 2222 13344455667777766666666556766663
No 309
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=36.77 E-value=34 Score=31.38 Aligned_cols=48 Identities=8% Similarity=0.152 Sum_probs=36.9
Q ss_pred CccEEEEEeCC-----cchHHHHHHHHhc--CCcEEEEccCCCccccchhcccccH
Q 039912 72 RIEYLVVVSDD-----SDFVEVLLEANLR--CLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 72 gv~clvLVSDd-----sdF~~~Lr~Ar~r--~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
.-+|||++--+ ..+..-|+.|+++ |.+.|||.=.- ....+.||.|++=
T Consensus 166 ~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~~-t~ta~~Ad~~l~i 220 (723)
T 2nap_A 166 QATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPRR-TNTSRIADMHVAF 220 (723)
T ss_dssp TCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSBC-CGGGGGCSEEECC
T ss_pred HCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCcC-CchhhhhCeeeec
Confidence 56788888765 3445678889998 99999998653 5678899999874
No 310
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.73 E-value=28 Score=27.88 Aligned_cols=70 Identities=13% Similarity=0.031 Sum_probs=44.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHH---HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDV---LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~---ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+. .++.....+...|..+.++..|=++...+-+...+. .+..+|-
T Consensus 22 G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvn 99 (285)
T 3sc4_A 22 GLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVN 99 (285)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667899999999999766554431100 122222223345778888888888887776655543 6776664
No 311
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=36.70 E-value=49 Score=28.00 Aligned_cols=67 Identities=10% Similarity=0.050 Sum_probs=47.6
Q ss_pred chhHhhhcceEEEecCCCcch-HHHHHHHHHHHHhhcCcc-----EEEEEeCCcchHHHHHHHHhcCCc-EEEEccC
Q 039912 36 LIGELKRGGLWVRTASDKPQA-TDVLLRNHLVITHKRRIE-----YLVVVSDDSDFVEVLLEANLRCLK-TVVVGDI 105 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA-AD~ALkrhm~~m~~~gv~-----clvLVSDdsdF~~~Lr~Ar~r~l~-TVVVGd~ 105 (198)
+...|+..|+.|-.|+.+|.. .-.+....+. ..||. .|+|-++.++-.+.+..-.+.|.+ .+.|||.
T Consensus 109 ll~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~---~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~ 182 (262)
T 3ocu_A 109 FNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMK---RLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDN 182 (262)
T ss_dssp HHHHHHHTTEEEEEEEEEETTTTHHHHHHHHH---HHTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEEEEEEESS
T ss_pred HHHHHHHCCCeEEEEeCCCccchHHHHHHHHH---HcCcCcccccceeccCCCCChHHHHHHHHhcCCCEEEEECCC
Confidence 567899999999999999975 3345555444 45776 578877777777776666655544 4568996
No 312
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=36.38 E-value=58 Score=25.68 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=43.7
Q ss_pred HHHHHHhhcCccEEEEEeCCcchHH----HHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 63 NHLVITHKRRIEYLVVVSDDSDFVE----VLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 63 rhm~~m~~~gv~clvLVSDdsdF~~----~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
+.+......|-+..+|+|-|+-|.+ +++.++++|+...||-..+ ....=.|-+.+||
T Consensus 69 ~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiS-s~~aa~a~~g~pl 129 (235)
T 1ve2_A 69 ARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVT-SAVGALSALGLPL 129 (235)
T ss_dssp HHHHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCC-TTHHHHHHTTCCS
T ss_pred HHHHHHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHh-HHHHHHHHcCCCc
Confidence 3444333567788888999987754 7788888999999998876 5666778899999
No 313
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=36.29 E-value=31 Score=27.37 Aligned_cols=20 Identities=10% Similarity=-0.009 Sum_probs=16.7
Q ss_pred hhHhhhcceEEEecCCCcch
Q 039912 37 IGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqA 56 (198)
-..|+..|+.+-.+|.||..
T Consensus 197 L~~L~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 197 SKMYALMGYQIVVVSGRESG 216 (301)
T ss_dssp HHHHHHTTCEEEEEECSCCC
T ss_pred HHHHHHCCCeEEEEeCCCcc
Confidence 35788899999999999974
No 314
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.28 E-value=38 Score=25.71 Aligned_cols=67 Identities=16% Similarity=0.137 Sum_probs=44.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+. .++.. ..|..+.++..|=++...+-+...+. .+..+|-
T Consensus 15 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 86 (235)
T 3l77_A 15 GEAIARALARDGYALALGARSVDRLEKIA-HELMQ--EQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVA 86 (235)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHH--HHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHh--hcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 66788999999999987666655443333 32321 34778888888888887766554432 6776664
No 315
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=36.26 E-value=1e+02 Score=25.02 Aligned_cols=62 Identities=11% Similarity=-0.004 Sum_probs=35.3
Q ss_pred hHhhhcceEEEecCCC-------c---chHHHHHHHHHHHHhhcCccEEEEEeCC------------cchHHHHHHHHhc
Q 039912 38 GELKRGGLWVRTASDK-------P---QATDVLLRNHLVITHKRRIEYLVVVSDD------------SDFVEVLLEANLR 95 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdK-------P---qAAD~ALkrhm~~m~~~gv~clvLVSDd------------sdF~~~Lr~Ar~r 95 (198)
..|++.|+.+-.+.-. | +..-..+++.+......|+.+|++-+-. ..|..+.+.|++.
T Consensus 83 ~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~ 162 (305)
T 3obe_A 83 KMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKA 162 (305)
T ss_dssp HHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 4566778776533211 1 2333456676776667788888754322 1244556667777
Q ss_pred CCcE
Q 039912 96 CLKT 99 (198)
Q Consensus 96 ~l~T 99 (198)
||+-
T Consensus 163 Gv~l 166 (305)
T 3obe_A 163 GILW 166 (305)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 7743
No 316
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=36.22 E-value=47 Score=29.48 Aligned_cols=74 Identities=15% Similarity=0.238 Sum_probs=43.4
Q ss_pred CCCCCCCc-----hhHhhhcce---------EEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh
Q 039912 29 TPEVGNGL-----IGELKRGGL---------WVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL 94 (198)
Q Consensus 29 tPkvgyGL-----a~ELrRAGv---------~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~ 94 (198)
+|.+|+|+ ...|...|. -|-.++-.+.+-..|++- ...+-+.|+.+.+-.++ ..+..-++.|.+
T Consensus 342 ~pavGfaiGieRli~~L~e~g~~p~~~~~p~~V~Vi~~~~~~~~~A~~l-a~~LR~~Gi~ve~d~~~-~sl~~q~k~A~~ 419 (465)
T 3net_A 342 MPGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVNMQDELMPTYLKV-SQQLRQAGLNVITNFEK-RQLGKQFQAADK 419 (465)
T ss_dssp CCEEEEEEEHHHHHHHHHHTTSSCCCCSCSCCEEECCSCGGGHHHHHHH-HHHHHHTTCCEEECCSC-CCHHHHHHHHHH
T ss_pred CceeeeeccHHHHHHHHHHcCCCCCcCCCCCeEEEEEcCHHHHHHHHHH-HHHHHHCCCEEEEEeCC-CCHHHHHHHHHH
Confidence 68888884 344544443 232233223333333222 22444678887665443 569999999999
Q ss_pred cCCcEEE-Ecc
Q 039912 95 RCLKTVV-VGD 104 (198)
Q Consensus 95 r~l~TVV-VGd 104 (198)
.|...+| ||+
T Consensus 420 ~g~p~~iiiG~ 430 (465)
T 3net_A 420 QGIRFCVIIGA 430 (465)
T ss_dssp HTCCEEEECCH
T ss_pred cCCCEEEEECc
Confidence 9998754 565
No 317
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=36.20 E-value=59 Score=24.49 Aligned_cols=67 Identities=9% Similarity=0.006 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..++..|.+.|..|..+...|+..+ .+...+... .+....++..|-++...+-+...+ -++..||-
T Consensus 20 G~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~ 91 (248)
T 2pnf_A 20 GRAIAEKLASAGSTVIITGTSGERAK-AVAEEIANK--YGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVN 91 (248)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhh--cCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 66788899999999987766555443 333433321 255666777777776665444433 26777664
No 318
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=36.13 E-value=59 Score=25.39 Aligned_cols=58 Identities=10% Similarity=0.035 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC--cEEEEccCCCccccchhccccc
Q 039912 60 LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL--KTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l--~TVVVGd~~~~~L~R~AD~~fs 119 (198)
++..++..+.++|++-|+-||-|+-|+- .+.++..++ ..-++.|.+ +.+.+.-.+++.
T Consensus 64 ~f~~~~~ef~~~gv~~VigIS~D~~~~~-~~w~~~~~~~~~f~lLSD~~-~~~a~ayGv~~~ 123 (171)
T 2xhf_A 64 EYLSLYDKFKEEGYHTIACIAVNDPFVM-AAWGKTVDPEHKIRMLADMH-GEFTRALGTELD 123 (171)
T ss_dssp HHHHTHHHHHHTTCCEEEEEESSCHHHH-HHHHHHHCTTCCSEEEECTT-SHHHHHHTCBCC
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCCHHHH-HHHHHhcCCCCCeEEEEeCC-chHHHHhCCcee
Confidence 6778888787899998888999999875 455666677 789999975 788888888765
No 319
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=36.12 E-value=57 Score=25.21 Aligned_cols=67 Identities=7% Similarity=-0.048 Sum_probs=42.7
Q ss_pred CCCchhHhhhcceEEEecCCCcc-hHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQ-ATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPq-AAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|.+|.+.|..|-.+...+. .+...++. +.. ..|..+.++..|=++...+-+.+.+- .+..||-
T Consensus 35 G~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~-l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 107 (267)
T 3gdg_A 35 GIEAARGCAEMGAAVAITYASRAQGAEENVKE-LEK--TYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIA 107 (267)
T ss_dssp HHHHHHHHHHTSCEEEECBSSSSSHHHHHHHH-HHH--HHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEE
T ss_pred HHHHHHHHHHCCCeEEEEeCCcchhHHHHHHH-HHH--hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45578899999999987654443 33444433 221 23677888888888877766555543 5666654
No 320
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=36.00 E-value=1.1e+02 Score=21.33 Aligned_cols=20 Identities=30% Similarity=0.408 Sum_probs=15.7
Q ss_pred chhHhhhcceEEEecCCCcc
Q 039912 36 LIGELKRGGLWVRTASDKPQ 55 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPq 55 (198)
+-.+|++.|+.+-.++..+.
T Consensus 97 ~l~~l~~~g~~~~i~s~~~~ 116 (214)
T 3e58_A 97 VLNEVKSQGLEIGLASSSVK 116 (214)
T ss_dssp HHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHCCCCEEEEeCCcH
Confidence 45678888998888888765
No 321
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=35.93 E-value=40 Score=26.00 Aligned_cols=63 Identities=16% Similarity=0.078 Sum_probs=36.5
Q ss_pred CCchhHhhhcceEEEecCCCcchHHHHHHHH----------HHHHhh---cCccEEEEEeCCcchH-HHHHHHHhcCCc
Q 039912 34 NGLIGELKRGGLWVRTASDKPQATDVLLRNH----------LVITHK---RRIEYLVVVSDDSDFV-EVLLEANLRCLK 98 (198)
Q Consensus 34 yGLa~ELrRAGv~VrtVsdKPqAAD~ALkrh----------m~~m~~---~gv~clvLVSDdsdF~-~~Lr~Ar~r~l~ 98 (198)
..++.+|.+.|+ |..+...|+..+.+. .. ...+.. .+.+.+++..++..-. -+...||+.+.+
T Consensus 22 ~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 22 LECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 98 (234)
T ss_dssp HHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC
Confidence 336889999999 888877777554332 10 011111 2556666665554332 344678887765
No 322
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=35.92 E-value=60 Score=25.42 Aligned_cols=58 Identities=7% Similarity=-0.008 Sum_probs=45.7
Q ss_pred HHHHHHHHH-hhcCccEEEEEeCCcchHHHHHHHHhcCC-cEEEEccCCCccccchhccccc
Q 039912 60 LLRNHLVIT-HKRRIEYLVVVSDDSDFVEVLLEANLRCL-KTVVVGDINDGALKRISYACFS 119 (198)
Q Consensus 60 ALkrhm~~m-~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l-~TVVVGd~~~~~L~R~AD~~fs 119 (198)
++..++..+ ..+|++-|+-||=|+-|+. -+.++..++ ..-++.|.+ +.+.+.-.+++.
T Consensus 66 ~f~~~~~~f~~~~g~~~V~gvS~D~~~~~-~~~~~~~~~~~f~lLsD~~-~~~a~~yGv~~~ 125 (182)
T 1xiy_A 66 GYEEEYDYFIKENNFDDIYCITNNDIYVL-KSWFKSMDIKKIKYISDGN-SSFTDSMNMLVD 125 (182)
T ss_dssp HHHHTHHHHHTTSCCSEEEEEESSCHHHH-HHHHHHTTCCSSEEEECTT-SHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCHHHH-HHHHHHcCCCCceEEEeCc-hHHHHHhCCcee
Confidence 677777777 7889988888999999974 556777788 589999975 788887777754
No 323
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=35.90 E-value=27 Score=30.59 Aligned_cols=45 Identities=18% Similarity=0.073 Sum_probs=35.1
Q ss_pred CccEEEEEeCCc---chHHHHHHHHhc--CCcEEEEccCCCccccchhcc
Q 039912 72 RIEYLVVVSDDS---DFVEVLLEANLR--CLKTVVVGDINDGALKRISYA 116 (198)
Q Consensus 72 gv~clvLVSDds---dF~~~Lr~Ar~r--~l~TVVVGd~~~~~L~R~AD~ 116 (198)
.=+.+|.+|-.- +-..+++.|+++ |.+||.|-...++.|.|.||.
T Consensus 109 ~~dl~i~iS~SG~T~e~~~al~~ak~~~~g~~~i~IT~~~~s~la~~ad~ 158 (389)
T 3i0z_A 109 VATVLVSFARSGNSPESLATVDLAKSLVDELYQVTITCAADGKLALQAHG 158 (389)
T ss_dssp SEEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHTSSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHccc
Confidence 445677777654 455677899998 999999977666899999996
No 324
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.86 E-value=22 Score=25.53 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=22.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVL 60 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~A 60 (198)
|..+|..|++.|+.|..+...|+..+.+
T Consensus 19 G~~la~~L~~~g~~v~vid~~~~~~~~~ 46 (140)
T 3fwz_A 19 GSLLGEKLLASDIPLVVIETSRTRVDEL 46 (140)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 4447889999999999888888766544
No 325
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=35.86 E-value=66 Score=24.96 Aligned_cols=67 Identities=12% Similarity=0.006 Sum_probs=41.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|..+...++.... +...+... .|..+.++..|=++...+-+...+. ++..||-
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 91 (263)
T 3ai3_A 20 GLAIAEGFAKEGAHIVLVARQVDRLHE-AARSLKEK--FGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVN 91 (263)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHH--HCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999877666554432 33333211 1556777778877776665544432 6766653
No 326
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=35.74 E-value=87 Score=23.03 Aligned_cols=49 Identities=10% Similarity=-0.044 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhh------cCccE-EEEEeCCc---chHHHHHHHHhcCCcEEEEccC
Q 039912 57 TDVLLRNHLVITHK------RRIEY-LVVVSDDS---DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 57 AD~ALkrhm~~m~~------~gv~c-lvLVSDds---dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
-..||...+..+.. .+... +|+++|+- +.....+.+++.|+...+||-+
T Consensus 86 ~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG 144 (189)
T 1atz_A 86 IGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSVDSVDAAADAARSNRVTVFPIGIG 144 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCSSCCHHHHHHHHHTTEEEEEEEES
T ss_pred HHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcC
Confidence 34577766654432 13334 77777753 5778888999999877666654
No 327
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=35.73 E-value=49 Score=26.25 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=46.3
Q ss_pred CchhHhhh-cceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEeC-------CcchHHHHHHHHhcCCcE
Q 039912 35 GLIGELKR-GGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVSD-------DSDFVEVLLEANLRCLKT 99 (198)
Q Consensus 35 GLa~ELrR-AGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVSD-------dsdF~~~Lr~Ar~r~l~T 99 (198)
|-+.-|++ +|+.|+.|..-|+--|. |+. .+.+..|+.||-..| +.|=..+.|.|-+.++-.
T Consensus 47 gTa~~L~e~~Gl~v~~v~k~~eGG~p----~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~ 116 (152)
T 1b93_A 47 TTGNLISRATGMNVNAMLSGPMGGDQ----QVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPV 116 (152)
T ss_dssp THHHHHHHHHCCCCEEECCGGGTHHH----HHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHhCceeEEEEecCCCCCc----hHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCE
Confidence 56788999 99999999877775442 666 555777999999888 345567888888888754
No 328
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=35.66 E-value=58 Score=25.95 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=44.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+...+.++ ..+ ...|..+.++..|=++...+-+...+. .+..||-
T Consensus 39 G~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 109 (271)
T 4ibo_A 39 GRAMAEGLAVAGARILINGTDPSRVAQTV-QEF---RNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVN 109 (271)
T ss_dssp HHHHHHHHHHTTCEEEECCSCHHHHHHHH-HHH---HHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHH---HhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 66789999999999988766665554333 323 245777888888888877766655542 5666653
No 329
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=35.60 E-value=91 Score=22.38 Aligned_cols=13 Identities=8% Similarity=0.087 Sum_probs=5.7
Q ss_pred HHhcCCcEEEEcc
Q 039912 92 ANLRCLKTVVVGD 104 (198)
Q Consensus 92 Ar~r~l~TVVVGd 104 (198)
|+..|+++|.|+.
T Consensus 176 a~~aG~~~i~~~~ 188 (229)
T 2fdr_A 176 ARAAGMRVIGFTG 188 (229)
T ss_dssp HHHTTCEEEEECC
T ss_pred HHHCCCEEEEEec
Confidence 3444444444444
No 330
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=35.58 E-value=64 Score=25.48 Aligned_cols=66 Identities=27% Similarity=0.272 Sum_probs=41.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVV 101 (198)
|..+|..|.+.|..|..+...+..... +...+. ...|..+.++..|=++...+-+...+ + ++..||
T Consensus 34 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv 104 (267)
T 1vl8_A 34 GFGIAQGLAEAGCSVVVASRNLEEASE-AAQKLT--EKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVV 104 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHH--HHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHH--HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 667889999999999877666554433 333331 12366777777787776655444433 2 566665
No 331
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=35.49 E-value=72 Score=25.44 Aligned_cols=65 Identities=17% Similarity=0.103 Sum_probs=43.6
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~----r~l~TVVV 102 (198)
|..+|..|.+.|..|-.+... ...+. +.. .+...|..+.++..|=++...+-+.+.. -++..||-
T Consensus 44 G~aia~~la~~G~~V~~~~r~-~~~~~-~~~---~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~ 112 (273)
T 3uf0_A 44 GRAIAHGYARAGAHVLAWGRT-DGVKE-VAD---EIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVN 112 (273)
T ss_dssp HHHHHHHHHHTTCEEEEEESS-THHHH-HHH---HHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCH-HHHHH-HHH---HHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 667899999999999876643 33222 222 2335677888899999998887666433 25665554
No 332
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=35.46 E-value=52 Score=26.39 Aligned_cols=63 Identities=17% Similarity=0.105 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++.++.+... + +..+..+..|=++...+-+...+. ++..||-
T Consensus 42 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 109 (277)
T 3gvc_A 42 GLAVARRLADEGCHVLCADIDGDAADAAATK----I---GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVA 109 (277)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----H---CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----c---CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998776666555433322 2 556777777888877665544432 6666653
No 333
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=35.34 E-value=63 Score=25.94 Aligned_cols=50 Identities=18% Similarity=0.114 Sum_probs=41.3
Q ss_pred hcCccEEEEEeCCcch----HHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 70 KRRIEYLVVVSDDSDF----VEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF----~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
..|-+..+|+|-|+-| ..+++.++++|+...||-..+ ....=.|-+.+||
T Consensus 94 ~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiS-s~~aa~a~~G~pl 147 (259)
T 2e0n_A 94 QAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIP-AFIAAGSAAGMPL 147 (259)
T ss_dssp HTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCC-HHHHHHHHTTCCS
T ss_pred HCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChh-HHHHHHHhcCCCC
Confidence 4577888888998877 577888899999999998887 5667778888888
No 334
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=35.15 E-value=63 Score=24.44 Aligned_cols=66 Identities=12% Similarity=0.073 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..++..|.+.|..|..+...+...+ .+...+. ..+..+.++..|=++...+-+...+ .++..||-
T Consensus 24 G~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~ 94 (255)
T 1fmc_A 24 GKEIAITFATAGASVVVSDINADAAN-HVVDEIQ---QLGGQAFACRCDITSEQELSALADFAISKLGKVDILVN 94 (255)
T ss_dssp HHHHHHHHHTTTCEEEEEESCHHHHH-HHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHH---HhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 66788899999999887655554433 2333333 3455677777787776666554443 26776664
No 335
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=35.11 E-value=1.9e+02 Score=23.91 Aligned_cols=62 Identities=13% Similarity=0.078 Sum_probs=39.1
Q ss_pred hHhhhcceEEEecC-----CCcchHHHHHHHHHHHHhhcCccEEEEEeC-CcchHHHHHHHHhcCCcEEEEc
Q 039912 38 GELKRGGLWVRTAS-----DKPQATDVLLRNHLVITHKRRIEYLVVVSD-DSDFVEVLLEANLRCLKTVVVG 103 (198)
Q Consensus 38 ~ELrRAGv~VrtVs-----dKPqAAD~ALkrhm~~m~~~gv~clvLVSD-dsdF~~~Lr~Ar~r~l~TVVVG 103 (198)
--.++.|+.+..+. ..|.+++.+ +=+..+.+.+|.||+.=+- ++..+.. .|++.|++.+++.
T Consensus 191 Yf~~~yGl~~~~~~~~~~~~eps~~~l~--~l~~~ik~~~v~~if~e~~~~~~~~~~--la~~~g~~v~~l~ 258 (286)
T 3gi1_A 191 YLAKRFGLKQLGISGISPEQEPSPRQLK--EIQDFVKEYNVKTIFAEDNVNPKIAHA--IAKSTGAKVKTLS 258 (286)
T ss_dssp HHHHHTTCEEEEEECSCC---CCHHHHH--HHHHHHHHTTCCEEEECTTSCTHHHHH--HHHTTTCEEEECC
T ss_pred HHHHHCCCeEeeccccCCCCCCCHHHHH--HHHHHHHHcCCCEEEEeCCCChHHHHH--HHHHhCCeEEEec
Confidence 35678888876543 357777543 3233455789999887554 3344444 4889999877664
No 336
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=35.09 E-value=7.3 Score=34.94 Aligned_cols=67 Identities=9% Similarity=-0.057 Sum_probs=47.1
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|.+-|..+|+.|-+..| |.=. .+ +... ........+||...+-.+...+++.|++.++.-.|.|.++
T Consensus 3 l~~cl~~~~~~v~~p~~-~~y~-~~--~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh 70 (473)
T 3rja_A 3 IEACLSAAGVPIDIPGT-ADYE-RD--VEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGH 70 (473)
T ss_dssp HHHHHHHTTCCBCCTTS-HHHH-HH--TCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHhCCCcEECCCC-CchH-HH--HHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 45667788876655333 3311 11 1111 2224456889999999999999999999999999999876
No 337
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=35.07 E-value=56 Score=26.23 Aligned_cols=66 Identities=15% Similarity=0.071 Sum_probs=45.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+. +.. .+...|..+.++..|=++...+-+...+. .+..+|-
T Consensus 41 G~aia~~la~~G~~V~~~~r~~~~~~~-~~~---~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn 111 (283)
T 3v8b_A 41 GRATALALAADGVTVGALGRTRTEVEE-VAD---EIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVA 111 (283)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHH-HHH---HHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH---HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 667889999999999876655544432 333 33356778888888888877665555542 6776664
No 338
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=35.05 E-value=93 Score=23.92 Aligned_cols=66 Identities=15% Similarity=0.129 Sum_probs=40.9
Q ss_pred CCCchhHhhhcceEEEecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..+|..|.+.|..|..+.. .++..+ .+...+. ..|..+.++..|=++...+-+...+ -++..||-
T Consensus 17 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 88 (246)
T 2uvd_A 17 GRAIAIDLAKQGANVVVNYAGNEQKAN-EVVDEIK---KLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVN 88 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66788999999999886544 444332 2333333 3466677777787777665554443 25666653
No 339
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=35.01 E-value=1e+02 Score=20.63 Aligned_cols=62 Identities=13% Similarity=0.164 Sum_probs=39.1
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc--CCcEEEEccCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR--CLKTVVVGDIN 106 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r--~l~TVVVGd~~ 106 (198)
.|...|.+.|+.|.++++-.+|- . . +.....+.++ ..+ .+-.++++..|+. .+..|++.+..
T Consensus 33 ~l~~~L~~~g~~v~~~~~~~~al----~-~---l~~~~~dlvi-~~~-~~g~~~~~~l~~~~~~~~ii~ls~~~ 96 (137)
T 2pln_A 33 EIEKGLNVKGFMADVTESLEDGE----Y-L---MDIRNYDLVM-VSD-KNALSFVSRIKEKHSSIVVLVSSDNP 96 (137)
T ss_dssp HHHHHHHHTTCEEEEESCHHHHH----H-H---HHHSCCSEEE-ECS-TTHHHHHHHHHHHSTTSEEEEEESSC
T ss_pred HHHHHHHHcCcEEEEeCCHHHHH----H-H---HHcCCCCEEE-EcC-ccHHHHHHHHHhcCCCccEEEEeCCC
Confidence 45667788899888776633332 1 1 1234678777 443 3444677777664 77888887764
No 340
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=35.00 E-value=1e+02 Score=23.81 Aligned_cols=30 Identities=27% Similarity=0.189 Sum_probs=16.3
Q ss_pred cEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 74 EYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 74 ~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
+-.+.|.|+.. +| +.-|+..|++||.|..+
T Consensus 203 ~~~~~VGD~~~-~D-i~~A~~aG~~~i~v~~g 232 (263)
T 1zjj_A 203 EELWMVGDRLD-TD-IAFAKKFGMKAIMVLTG 232 (263)
T ss_dssp CEEEEEESCTT-TH-HHHHHHTTCEEEEESSS
T ss_pred ccEEEECCChH-HH-HHHHHHcCCeEEEECCC
Confidence 34555666521 12 44666677777777543
No 341
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=34.91 E-value=82 Score=24.43 Aligned_cols=65 Identities=25% Similarity=0.165 Sum_probs=41.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---h---cCCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---L---RCLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~---r~l~TVV 101 (198)
|..+|..|.+.|..|..+...+...+.++ ..+. ..|....++..|=++...+-+... + -.+..||
T Consensus 22 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv 92 (260)
T 2ae2_A 22 GYGIVEELASLGASVYTCSRNQKELNDCL-TQWR---SKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILV 92 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHH---HTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEE
Confidence 66788999999999987766655443332 2232 346677777788777766554443 3 2465555
No 342
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=34.85 E-value=72 Score=24.89 Aligned_cols=66 Identities=12% Similarity=0.028 Sum_probs=42.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|..+...++..+. +...+. ..|..+.++..|=++...+-+...+. ++..||-
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 90 (262)
T 1zem_A 20 GLATALRLAEEGTAIALLDMNREALEK-AEASVR---EKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFN 90 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHH---TTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHH---hcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 667888999999999876655554432 333232 44667778888888777665544432 6666654
No 343
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=34.81 E-value=64 Score=25.12 Aligned_cols=63 Identities=14% Similarity=0.008 Sum_probs=40.6
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++.+..+... + +-.+.++..|=++...+-+...+. ++..||-
T Consensus 21 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 88 (259)
T 4e6p_A 21 GRAFAEAYVREGATVAIADIDIERARQAAAE----I---GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVN 88 (259)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----H---CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----h---CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998766655544333222 2 445677777877776655544432 6776664
No 344
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=34.78 E-value=53 Score=25.72 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=43.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVV 101 (198)
|..+|..|.+.|..|-.+...++..+. +...+......+..+.++..|=++...+-+...+ + .+..+|
T Consensus 20 G~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 92 (250)
T 3nyw_A 20 GAVIAAGLATDGYRVVLIARSKQNLEK-VHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILV 92 (250)
T ss_dssp HHHHHHHHHHHTCEEEEEESCHHHHHH-HHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 677899999999999887766665543 3344443312236677788888887766555443 2 555554
No 345
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=34.71 E-value=92 Score=24.84 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=25.3
Q ss_pred cEEEEEeCCc-----chHHHHHHHHhcCCcEEEEccCC
Q 039912 74 EYLVVVSDDS-----DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 74 ~clvLVSDds-----dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.-|||+||-. +....++.+|..|+...+||-+.
T Consensus 127 ~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~ 164 (266)
T 4hqo_A 127 QLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQ 164 (266)
T ss_dssp EEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred eEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence 4689999853 56778888899999877777653
No 346
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=34.61 E-value=96 Score=24.90 Aligned_cols=70 Identities=17% Similarity=0.039 Sum_probs=44.1
Q ss_pred CCCchhHhhhcceEEEecCCCcch--------HHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQA--------TDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKT 99 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqA--------AD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~T 99 (198)
|..+|..|.+.|..|-.+...++. ....+......+...|..+.++..|=++...+-+...+ -.+..
T Consensus 41 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 120 (299)
T 3t7c_A 41 GRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDI 120 (299)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred HHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 667889999999999765433210 01123333333335678889999999888877665543 25666
Q ss_pred EEE
Q 039912 100 VVV 102 (198)
Q Consensus 100 VVV 102 (198)
+|-
T Consensus 121 lv~ 123 (299)
T 3t7c_A 121 VLA 123 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 347
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=34.59 E-value=68 Score=24.87 Aligned_cols=67 Identities=13% Similarity=0.051 Sum_probs=40.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcch-HHH---HHHHHhc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDF-VEV---LLEANLR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF-~~~---Lr~Ar~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++....++.. +.. ..+-.+.++..|=++. ..+ .....++ .+..||-
T Consensus 25 G~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~-l~~--~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~ 97 (311)
T 3o26_A 25 GFEICKQLSSNGIMVVLTCRDVTKGHEAVEK-LKN--SNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVN 97 (311)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHT--TTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHh--cCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEE
Confidence 6778999999999998876666555444332 321 2234566777777776 433 3333332 6766554
No 348
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=34.51 E-value=31 Score=25.03 Aligned_cols=27 Identities=26% Similarity=0.370 Sum_probs=21.5
Q ss_pred CcchHHHHHHHHhcCCcEEEEc-----cCCCc
Q 039912 82 DSDFVEVLLEANLRCLKTVVVG-----DINDG 108 (198)
Q Consensus 82 dsdF~~~Lr~Ar~r~l~TVVVG-----d~~~~ 108 (198)
+.++..+.+..++.++..|||| |++.+
T Consensus 37 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~ 68 (98)
T 1iv0_A 37 EEDVEALLDFVRREGLGKLVVGLPLRTDLKES 68 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcC
Confidence 4567778888999999999999 76643
No 349
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=34.51 E-value=45 Score=25.45 Aligned_cols=62 Identities=8% Similarity=0.092 Sum_probs=35.2
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcch-----HHHHHHHHhcCC----cEEEEccC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDF-----VEVLLEANLRCL----KTVVVGDI 105 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF-----~~~Lr~Ar~r~l----~TVVVGd~ 105 (198)
+-..|+..|+.+-.+|.+|... +++ .+ ....+++ +.|++... ..+++.+++.|+ .+|+|||+
T Consensus 44 ~L~~L~~~g~~~~i~T~~~~~~--~~~----~~-~~~~d~v-~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs 114 (196)
T 2oda_A 44 ALKALRDQGMPCAWIDELPEAL--STP----LA-APVNDWM-IAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGD 114 (196)
T ss_dssp HHHHHHHHTCCEEEECCSCHHH--HHH----HH-TTTTTTC-EECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESC
T ss_pred HHHHHHHCCCEEEEEcCChHHH--HHH----hc-CccCCEE-EECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCC
Confidence 3467888898888888888754 211 11 1223433 33454332 224445555565 36889996
No 350
>4fc5_A TON_0340, putative uncharacterized protein; unknown function; 2.30A {Thermococcus onnurineus}
Probab=34.50 E-value=24 Score=30.59 Aligned_cols=67 Identities=15% Similarity=0.087 Sum_probs=42.5
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHh----hcCccEEEEE-------------------eCCcchHHHHHHH
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITH----KRRIEYLVVV-------------------SDDSDFVEVLLEA 92 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~----~~gv~clvLV-------------------SDdsdF~~~Lr~A 92 (198)
||..|.+-|..|..|.|+|-.. +|+..-..+. ....+.||-+ + ...|-.++..|
T Consensus 69 la~aL~~lG~~~~ivt~~~~~~--~~~~~~~~~~~~~~~~~~~~lIaIERpGra~dG~y~nmrG~dI~-~~~lD~lf~~a 145 (270)
T 4fc5_A 69 IYRAVEMLGGKAEILTYSEVEK--ALEPFGVSLARTPEPEDYSLIISVETPGRAADGRYYSMSALEIK-RDPLDGIFLKA 145 (270)
T ss_dssp HHHHHHHTTCCEEEECCHHHHH--HHGGGCCCBCSSCCGGGCSEEEEESCBCCBTTSCCBCTTCCBCC-SCCSCHHHHHH
T ss_pred HHHHHHHcCCceEEEecHHHHH--HHHHhccccccCCCCCCCCEEEEEccCcCCCCCCcccCcCCcCC-ccchHHHHHHH
Confidence 6778999999999988865433 4443111000 1112223221 2 24577889999
Q ss_pred HhcCCcEEEEccC
Q 039912 93 NLRCLKTVVVGDI 105 (198)
Q Consensus 93 r~r~l~TVVVGd~ 105 (198)
++.|+.|+-|||+
T Consensus 146 ~~~gi~tigIGDG 158 (270)
T 4fc5_A 146 RALGIPTIGVGDG 158 (270)
T ss_dssp HHHTCCEEEEESS
T ss_pred HhCCCCEEEEcCC
Confidence 9999999999995
No 351
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=34.49 E-value=73 Score=24.17 Aligned_cols=63 Identities=14% Similarity=0.071 Sum_probs=39.3
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE-EEEEeCCcchHHHHHHHHh----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY-LVVVSDDSDFVEVLLEANL----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c-lvLVSDdsdF~~~Lr~Ar~----r~l~TVVV 102 (198)
|..++.+|.+.|..|..+...|+..+.+. .+ + +... .++..|=++...+-+...+ .++..||-
T Consensus 24 G~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~---~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~ 91 (254)
T 2wsb_A 24 GLEICRAFAASGARLILIDREAAALDRAA-QE---L---GAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVN 91 (254)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH---H---GGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HH---h---cccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 66788999999999988766665443322 21 2 3445 5566777777666555443 35655553
No 352
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=34.45 E-value=79 Score=24.47 Aligned_cols=66 Identities=15% Similarity=0.053 Sum_probs=41.6
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|..+...++..+.+ ...+. ..|....++..|-++...+-+... ++ ++..||-
T Consensus 27 G~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 97 (260)
T 2zat_A 27 GLAIARRLAQDGAHVVVSSRKQENVDRT-VATLQ---GEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVS 97 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHH---hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998776666544333 23232 346667777777777665544433 32 5666653
No 353
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=34.33 E-value=33 Score=25.99 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=45.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHH------------HHHhhcCccEEEEEeCCcc--------------hH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHL------------VITHKRRIEYLVVVSDDSD--------------FV 86 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm------------~~m~~~gv~clvLVSDdsd--------------F~ 86 (198)
|.-|+.+|.+.|..|..+...|+.........+ ... -.++|.||...--.. ..
T Consensus 34 G~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~ 112 (236)
T 3e8x_A 34 ARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHA-FASIDAVVFAAGSGPHTGADKTILIDLWGAI 112 (236)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGG-GTTCSEEEECCCCCTTSCHHHHHHTTTHHHH
T ss_pred HHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHH-HcCCCEEEECCCCCCCCCccccchhhHHHHH
Confidence 567889999999999987777765533222111 111 137888876654331 23
Q ss_pred HHHHHHHhcCCcEEEE-cc
Q 039912 87 EVLLEANLRCLKTVVV-GD 104 (198)
Q Consensus 87 ~~Lr~Ar~r~l~TVVV-Gd 104 (198)
.+++.|++.+++.+|. +.
T Consensus 113 ~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 113 KTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp HHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHcCCCEEEEEec
Confidence 5788899989876664 55
No 354
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=34.26 E-value=74 Score=22.41 Aligned_cols=21 Identities=24% Similarity=0.275 Sum_probs=16.6
Q ss_pred chhHhhhcceEEEecCCCcch
Q 039912 36 LIGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA 56 (198)
+-..|+..|+.+-.+|..|..
T Consensus 90 ~l~~l~~~g~~~~i~s~~~~~ 110 (219)
T 3kd3_A 90 LVQDLKNKGFEIWIFSGGLSE 110 (219)
T ss_dssp HHHHHHHTTCEEEEEEEEEHH
T ss_pred HHHHHHHCCCeEEEEcCCcHH
Confidence 456788899999998887764
No 355
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=34.14 E-value=1.4e+02 Score=21.93 Aligned_cols=47 Identities=21% Similarity=0.265 Sum_probs=30.9
Q ss_pred CcchHHHHHHHHHHHHhhcCccEEEEEeCC--cchHHHHHHHHhcCCcEEEEccCC
Q 039912 53 KPQATDVLLRNHLVITHKRRIEYLVVVSDD--SDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 53 KPqAAD~ALkrhm~~m~~~gv~clvLVSDd--sdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
||... .+...+..+ +...+.++.|-|. .| +..|++.|++||.|....
T Consensus 97 KP~p~--~~~~~~~~~-~~~~~~~l~VGD~~~~D----i~~A~~aG~~~i~v~~~~ 145 (189)
T 3ib6_A 97 KPDKT--IFDFTLNAL-QIDKTEAVMVGNTFESD----IIGANRAGIHAIWLQNPE 145 (189)
T ss_dssp TTSHH--HHHHHHHHH-TCCGGGEEEEESBTTTT----HHHHHHTTCEEEEECCTT
T ss_pred CcCHH--HHHHHHHHc-CCCcccEEEECCCcHHH----HHHHHHCCCeEEEECCcc
Confidence 77754 444444444 3344567778876 34 457999999999997653
No 356
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=34.08 E-value=73 Score=25.41 Aligned_cols=66 Identities=17% Similarity=0.175 Sum_probs=42.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHH---HHHHHHhc-CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVE---VLLEANLR-CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~---~Lr~Ar~r-~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+ ...+. ..|..+.++..|=++... ++..+.+. .+..+|-
T Consensus 46 G~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~---~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvn 115 (275)
T 4imr_A 46 GAAIAEGLAGAGAHVILHGVKPGSTAAV-QQRII---ASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILVI 115 (275)
T ss_dssp HHHHHHHHHHTTCEEEEEESSTTTTHHH-HHHHH---HTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHH---hcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 6778999999999998776666655433 33333 356677777777666544 44444443 5655554
No 357
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=34.06 E-value=57 Score=25.97 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=43.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+..++ .+...+. ..|..+..+..|=++...+-+...+. .+..||-
T Consensus 41 G~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 111 (270)
T 3ftp_A 41 GRAIALELARRGAMVIGTATTEAGAE-GIGAAFK---QAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVN 111 (270)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHH---HHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHH---hcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66788999999999987666555443 3333333 34667777777877776665555432 5665553
No 358
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=33.79 E-value=72 Score=23.77 Aligned_cols=55 Identities=9% Similarity=0.120 Sum_probs=37.7
Q ss_pred HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc--EEEEccCCCccccchhcc
Q 039912 60 LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK--TVVVGDINDGALKRISYA 116 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~--TVVVGd~~~~~L~R~AD~ 116 (198)
.|.+....+...|++-|+-||-|+.+ .+.+.+++.++. .-++-|.+ +.+.+.-.+
T Consensus 54 ~l~~~~~~~~~~gv~~vv~Is~d~~~-~~~~~~~~~~~~~~fp~l~D~~-~~~~~~~gv 110 (167)
T 2wfc_A 54 GYVEQAAAIHGKGVDIIACMAVNDSF-VMDAWGKAHGADDKVQMLADPG-GAFTKAVDM 110 (167)
T ss_dssp HHHHTHHHHHHTTCCEEEEEESSCHH-HHHHHHHHTTCTTTSEEEECTT-SHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCCHH-HHHHHHHhcCCCcceEEEECCC-CcHHHHcCC
Confidence 45555556667899778888877654 567788888997 77788864 555554333
No 359
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=33.64 E-value=77 Score=24.82 Aligned_cols=68 Identities=18% Similarity=0.100 Sum_probs=43.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+ ...+... ..+..+.++..|=++...+-+...+. .+..+|-
T Consensus 21 G~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvn 93 (265)
T 3lf2_A 21 GLATVELLLEAGAAVAFCARDGERLRAA-ESALRQR-FPGARLFASVCDVLDALQVRAFAEACERTLGCASILVN 93 (265)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHH-STTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHh-cCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998776666555433 3333321 23445788888888877765555442 5655553
No 360
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=33.50 E-value=53 Score=28.24 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=26.0
Q ss_pred HHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEc
Q 039912 65 LVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVG 103 (198)
Q Consensus 65 m~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVG 103 (198)
+..|++.|++.|+-.+|.. ++++.|+++|+ -|||
T Consensus 201 a~~l~~~G~DvIf~~~d~~---Gv~~aa~e~Gv--~vIG 234 (356)
T 3s99_A 201 AKALIDQGVDIITQHTDST---AAIQVAHDRGI--KAFG 234 (356)
T ss_dssp HHHHHHTTCSEEEESSSSS---HHHHHHHHTTC--EEEE
T ss_pred HHHHHhCCCcEEEECCCch---HHHHHHHHcCC--EEEE
Confidence 3355678999877777765 89999999998 4555
No 361
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=33.21 E-value=46 Score=25.34 Aligned_cols=17 Identities=24% Similarity=0.397 Sum_probs=8.2
Q ss_pred EEEEeCCcc-hHHHHHHH
Q 039912 76 LVVVSDDSD-FVEVLLEA 92 (198)
Q Consensus 76 lvLVSDdsd-F~~~Lr~A 92 (198)
...|.||.+ ....|+.+
T Consensus 59 ~~iV~Dd~~~i~~al~~~ 76 (178)
T 3iwt_A 59 YSLVPDDKIKILKAFTDA 76 (178)
T ss_dssp EEEECSCHHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHHH
Confidence 455566542 34444443
No 362
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=33.10 E-value=1.6e+02 Score=22.50 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=30.2
Q ss_pred HHhhcCccEEEEEe----CCcchHHHHHHHHhcCCcEEEEcc
Q 039912 67 ITHKRRIEYLVVVS----DDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 67 ~m~~~gv~clvLVS----DdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
.+...|+.+.++-+ ....|...++.|++-|.++|++.-
T Consensus 71 ~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 112 (262)
T 3p6l_A 71 LAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEP 112 (262)
T ss_dssp HHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecC
Confidence 55578888765543 345789999999999999999974
No 363
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=33.09 E-value=43 Score=26.50 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=43.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHH---HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDV---LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~---ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+. .+......+...|..+.++..|=++...+-+.+.+. .+..+|-
T Consensus 19 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 96 (274)
T 3e03_A 19 GLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVN 96 (274)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 567889999999998765544432110 122222223345778888888988887776655542 6666654
No 364
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=33.02 E-value=78 Score=25.15 Aligned_cols=66 Identities=14% Similarity=0.044 Sum_probs=44.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+ ...+ ...|....++..|=++...+-+...+. .+..||-
T Consensus 37 G~aia~~la~~G~~V~~~~r~~~~~~~~-~~~l---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~ 107 (279)
T 3sju_A 37 GLAVARTLAARGIAVYGCARDAKNVSAA-VDGL---RAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVN 107 (279)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHH---HTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHH---HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 6678899999999998766655544333 3323 245777888888888877765554432 5665553
No 365
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.98 E-value=75 Score=24.79 Aligned_cols=69 Identities=14% Similarity=0.062 Sum_probs=42.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|..+...|...+. +...+......+..+.++..|=++...+-+...+ + ++..||-
T Consensus 19 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 92 (278)
T 1spx_A 19 GRATAVLFAREGAKVTITGRHAERLEE-TRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVN 92 (278)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999877666554433 3333321122355667777787776665554443 2 6766653
No 366
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=32.93 E-value=1.3e+02 Score=21.44 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=30.4
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc---EEEEEeCCcc-----hHHHHHHHHhcCC---cEEEEccC
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE---YLVVVSDDSD-----FVEVLLEANLRCL---KTVVVGDI 105 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~---clvLVSDdsd-----F~~~Lr~Ar~r~l---~TVVVGd~ 105 (198)
..|++. +.+-.+|..|... +.. .+...|+. ..++.|++.. =..+.+.+++.|+ ++++|||+
T Consensus 93 ~~l~~~-~~~~i~s~~~~~~---~~~---~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~ 164 (209)
T 2hdo_A 93 EQLPSE-LRLGIVTSQRRNE---LES---GMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDS 164 (209)
T ss_dssp HHSCTT-SEEEEECSSCHHH---HHH---HHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred HHHHhc-CcEEEEeCCCHHH---HHH---HHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCC
Confidence 445666 7777778776531 111 12123442 1344454321 2233444455565 47888886
No 367
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=32.68 E-value=74 Score=25.09 Aligned_cols=70 Identities=16% Similarity=0.192 Sum_probs=43.4
Q ss_pred CCCCchhHhhhcceEEEecCCCcc-hHHHHHH-----------------HHHHHHhhcCccEEEEEeCCc---chHHHHH
Q 039912 32 VGNGLIGELKRGGLWVRTASDKPQ-ATDVLLR-----------------NHLVITHKRRIEYLVVVSDDS---DFVEVLL 90 (198)
Q Consensus 32 vgyGLa~ELrRAGv~VrtVsdKPq-AAD~ALk-----------------rhm~~m~~~gv~clvLVSDds---dF~~~Lr 90 (198)
+|..++.+|.+.|..|+.+...|. .+ ..+. ..+.... .|++.||...... .-..+++
T Consensus 23 iG~~l~~~L~~~g~~V~~l~R~~~~~~-~~~~~l~~~~v~~v~~Dl~d~~~l~~a~-~~~d~vi~~a~~~~~~~~~~l~~ 100 (318)
T 2r6j_A 23 IGNHMVKGSLKLGHPTYVFTRPNSSKT-TLLDEFQSLGAIIVKGELDEHEKLVELM-KKVDVVISALAFPQILDQFKILE 100 (318)
T ss_dssp THHHHHHHHHHTTCCEEEEECTTCSCH-HHHHHHHHTTCEEEECCTTCHHHHHHHH-TTCSEEEECCCGGGSTTHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEECCCCchh-hHHHHhhcCCCEEEEecCCCHHHHHHHH-cCCCEEEECCchhhhHHHHHHHH
Confidence 356688888888988876555443 21 1111 1222221 3788888766533 2457888
Q ss_pred HHHhcC-CcEEEEc
Q 039912 91 EANLRC-LKTVVVG 103 (198)
Q Consensus 91 ~Ar~r~-l~TVVVG 103 (198)
.|++.| ++.+|.+
T Consensus 101 aa~~~g~v~~~v~S 114 (318)
T 2r6j_A 101 AIKVAGNIKRFLPS 114 (318)
T ss_dssp HHHHHCCCCEEECS
T ss_pred HHHhcCCCCEEEee
Confidence 899988 9998853
No 368
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=32.65 E-value=81 Score=24.00 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=38.4
Q ss_pred CCCchhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh
Q 039912 33 GNGLIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL 94 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~ 94 (198)
|..+|..|.+.|..|-.+ ...++.++. +...+ ...+..+.++..|-++...+-+...+
T Consensus 20 G~~~a~~l~~~G~~v~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (255)
T 3icc_A 20 GRAIAKRLANDGALVAIHYGNRKEEAEE-TVYEI---QSNGGSAFSIGANLESLHGVEALYSS 78 (255)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCSHHHHH-HHHHH---HHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCchHHHHH-HHHHH---HhcCCceEEEecCcCCHHHHHHHHHH
Confidence 677899999999988764 444443332 23323 24577788888888888776555443
No 369
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=32.49 E-value=80 Score=24.66 Aligned_cols=18 Identities=17% Similarity=0.196 Sum_probs=9.4
Q ss_pred hHHHHHHHHhcCCcEEEE
Q 039912 85 FVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 85 F~~~Lr~Ar~r~l~TVVV 102 (198)
|...++.|.+-|.++|||
T Consensus 106 ~~~~i~~a~~lGa~~v~~ 123 (287)
T 3kws_A 106 MKEIIAAAGELGSTGVII 123 (287)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 344555555555555554
No 370
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=32.46 E-value=1.1e+02 Score=22.87 Aligned_cols=76 Identities=9% Similarity=-0.059 Sum_probs=41.6
Q ss_pred hhHhhhcceEEEecCCCcch-HHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC---cEEEEccCC--Cccc
Q 039912 37 IGELKRGGLWVRTASDKPQA-TDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL---KTVVVGDIN--DGAL 110 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqA-AD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l---~TVVVGd~~--~~~L 110 (198)
-..|+ .|+.+-.++..+.. ....|++ +. + ..-++.++ .+..++=..+...+++.|+ .+++|||+. |-..
T Consensus 121 l~~l~-~~~~~~i~t~~~~~~~~~~l~~-~~-l-~~~f~~i~-~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~ 195 (251)
T 2pke_A 121 VAAIA-ADYAVVLITKGDLFHQEQKIEQ-SG-L-SDLFPRIE-VVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEP 195 (251)
T ss_dssp HHHHH-TTSEEEEEEESCHHHHHHHHHH-HS-G-GGTCCCEE-EESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHH
T ss_pred HHHHH-CCCEEEEEeCCCHHHHHHHHHH-cC-c-HHhCceee-eeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHH
Confidence 45566 78888888877753 2222221 10 1 11234443 3555665555666666676 489999973 4444
Q ss_pred cchhccc
Q 039912 111 KRISYAC 117 (198)
Q Consensus 111 ~R~AD~~ 117 (198)
.+.|.+.
T Consensus 196 a~~aG~~ 202 (251)
T 2pke_A 196 VLAIGGW 202 (251)
T ss_dssp HHHTTCE
T ss_pred HHHCCCE
Confidence 4555443
No 371
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=32.27 E-value=71 Score=25.13 Aligned_cols=67 Identities=13% Similarity=0.038 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCC--cchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDK--PQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdK--PqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+... .+..-..+...+ ...|..+.++..|=++...+-+...+ + .+..+|-
T Consensus 24 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 97 (262)
T 3ksu_A 24 GALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL---EDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAIN 97 (262)
T ss_dssp HHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHH---HTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHH---HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999998875322 222212333333 35577888888888887776655543 2 5655553
No 372
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=32.21 E-value=42 Score=25.76 Aligned_cols=63 Identities=17% Similarity=0.158 Sum_probs=35.2
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccE---EEEEeCCcc-----hHHHHHHHHhcCC---cEEEEcc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEY---LVVVSDDSD-----FVEVLLEANLRCL---KTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~c---lvLVSDdsd-----F~~~Lr~Ar~r~l---~TVVVGd 104 (198)
+-..|++.|+.+-.+|..|......|++ .|+.- .++.|++.. =..+...+++.|+ .+|+|||
T Consensus 114 ~l~~l~~~g~~~~i~tn~~~~~~~~l~~-------~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD 186 (263)
T 3k1z_A 114 TLRECRTRGLRLAVISNFDRRLEGILGG-------LGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGD 186 (263)
T ss_dssp HHHHHHHTTCEEEEEESCCTTHHHHHHH-------TTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHhCCCcEEEEeCCcHHHHHHHHh-------CCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECC
Confidence 4456788999988888887754333322 33321 233444322 1223344444565 4899999
Q ss_pred C
Q 039912 105 I 105 (198)
Q Consensus 105 ~ 105 (198)
+
T Consensus 187 ~ 187 (263)
T 3k1z_A 187 N 187 (263)
T ss_dssp C
T ss_pred C
Confidence 7
No 373
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=32.20 E-value=58 Score=25.55 Aligned_cols=54 Identities=17% Similarity=0.122 Sum_probs=37.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN 93 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar 93 (198)
|..+|..|.+.|..|-.+...++..+..... .|..+.++..|=++...+-+...
T Consensus 21 G~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~ 74 (255)
T 4eso_A 21 GLATVRRLVEGGAEVLLTGRNESNIARIREE-------FGPRVHALRSDIADLNEIAVLGA 74 (255)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HGGGEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------hCCcceEEEccCCCHHHHHHHHH
Confidence 6678999999999998876665544332221 25577788888888776655544
No 374
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=32.14 E-value=55 Score=26.29 Aligned_cols=66 Identities=18% Similarity=0.018 Sum_probs=44.3
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++.... +.. .+...|..+.++..|=++...+-+...+. ++..+|-
T Consensus 21 G~aia~~la~~G~~V~~~~r~~~~~~~-~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 91 (280)
T 3tox_A 21 GRAAALLFAREGAKVVVTARNGNALAE-LTD---EIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFN 91 (280)
T ss_dssp HHHHHHHHHHTTCEEEECCSCHHHHHH-HHH---HHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHH-HHH---HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 677899999999999887666554433 333 23345777888888888877665555432 6766653
No 375
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=32.11 E-value=96 Score=24.22 Aligned_cols=70 Identities=17% Similarity=0.041 Sum_probs=43.0
Q ss_pred CCCchhHhhhcceEEEecCCCcc--------hHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQ--------ATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKT 99 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPq--------AAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~T 99 (198)
|..+|..|.+.|..|-.+...++ .....+......+...|..+.++..|=++...+-+...+. .+..
T Consensus 26 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 105 (278)
T 3sx2_A 26 GRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDI 105 (278)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCE
T ss_pred HHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 66789999999999976543311 1112333333333345777888888888877766555432 6665
Q ss_pred EEE
Q 039912 100 VVV 102 (198)
Q Consensus 100 VVV 102 (198)
+|-
T Consensus 106 lv~ 108 (278)
T 3sx2_A 106 VVA 108 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 376
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=32.11 E-value=43 Score=25.61 Aligned_cols=92 Identities=9% Similarity=-0.019 Sum_probs=50.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHH--------------HHHHhhcCccEEEEEeCCcchHHH-HHHHHh-cC
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNH--------------LVITHKRRIEYLVVVSDDSDFVEV-LLEANL-RC 96 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrh--------------m~~m~~~gv~clvLVSDdsdF~~~-Lr~Ar~-r~ 96 (198)
|..+|..|.+.|+.|..+...|+....+.... +....-.+.+.+++..++....-+ ...|+. .+
T Consensus 12 G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 91 (218)
T 3l4b_C 12 AYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG 91 (218)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC
Confidence 55688899999999998888787654332210 111111356677776666554443 345665 46
Q ss_pred CcEEEEccCCC---ccccc-hhcccccHHHHh
Q 039912 97 LKTVVVGDIND---GALKR-ISYACFSWWDIL 124 (198)
Q Consensus 97 l~TVVVGd~~~---~~L~R-~AD~~fsW~eV~ 124 (198)
...||+=-.+. ..|.+ .||.-++=..+.
T Consensus 92 ~~~iia~~~~~~~~~~l~~~G~d~vi~p~~~~ 123 (218)
T 3l4b_C 92 VKRVVSLVNDPGNMEIFKKMGITTVLNLTTLI 123 (218)
T ss_dssp CCEEEECCCSGGGHHHHHHHTCEECCCHHHHH
T ss_pred CCeEEEEEeCcchHHHHHHCCCCEEECHHHHH
Confidence 66665532221 12222 256556655544
No 377
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=32.05 E-value=1.2e+02 Score=20.64 Aligned_cols=28 Identities=14% Similarity=0.032 Sum_probs=22.8
Q ss_pred cchHHHHHHHHhcCCcEEEEccCCCcccc
Q 039912 83 SDFVEVLLEANLRCLKTVVVGDINDGALK 111 (198)
Q Consensus 83 sdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~ 111 (198)
+-...+++.|++.+...||+|-. ++.+.
T Consensus 93 ~~~~~I~~~a~~~~~dliV~G~~-~~~~~ 120 (143)
T 3fdx_A 93 SPKDKILALAKSLPADLVIIASH-RPDIT 120 (143)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESS-CTTCC
T ss_pred ChHHHHHHHHHHhCCCEEEEeCC-CCCCe
Confidence 55788999999999999999986 34443
No 378
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=32.01 E-value=58 Score=25.96 Aligned_cols=62 Identities=16% Similarity=0.125 Sum_probs=41.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..+|..|.+.|..|-.+...++..+.... ..+..+.++..|=++...+-+...+. .+..+|
T Consensus 18 G~aia~~la~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 84 (281)
T 3zv4_A 18 GRALVDRFVAEGARVAVLDKSAERLRELEV-------AHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLI 84 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-------HcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 667889999999999877665554432221 23667788888888877765555442 565554
No 379
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=31.97 E-value=19 Score=28.69 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCCcc-------hHHHHHHHHHHHHhhcCccEEEEEeCCcch----------------HHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQ-------ATDVLLRNHLVITHKRRIEYLVVVSDDSDF----------------VEVL 89 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPq-------AAD~ALkrhm~~m~~~gv~clvLVSDdsdF----------------~~~L 89 (198)
|.-|+..|.+.|+.|..+...|. .+|..=...+..... +++.||-...-..+ ..+|
T Consensus 32 G~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll 110 (347)
T 4id9_A 32 GRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIM-GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLL 110 (347)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHT-TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHh-CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHH
Confidence 56788999999999986655442 122211122222212 89998865432221 4588
Q ss_pred HHHHhcCCcEEEE
Q 039912 90 LEANLRCLKTVVV 102 (198)
Q Consensus 90 r~Ar~r~l~TVVV 102 (198)
+.|++.+++.+|.
T Consensus 111 ~a~~~~~~~~~V~ 123 (347)
T 4id9_A 111 DAASAAGVRRFVF 123 (347)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCCeEEE
Confidence 9999999966553
No 380
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=31.95 E-value=1e+02 Score=22.39 Aligned_cols=49 Identities=14% Similarity=0.079 Sum_probs=29.9
Q ss_pred CCcchHHHHHHHHHHHHhhcCcc-EEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 52 DKPQATDVLLRNHLVITHKRRIE-YLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 52 dKPqAAD~ALkrhm~~m~~~gv~-clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.||... ++..-+..+ +...+ .++.|-|.. .| +.-|+..|+++|.||...
T Consensus 158 ~Kp~~~--~~~~~~~~l-gi~~~~~~v~vGD~~--~D-i~~a~~aG~~~v~~~~~~ 207 (231)
T 3kzx_A 158 IKPSPE--PVLAALTNI-NIEPSKEVFFIGDSI--SD-IQSAIEAGCLPIKYGSTN 207 (231)
T ss_dssp CTTSSH--HHHHHHHHH-TCCCSTTEEEEESSH--HH-HHHHHHTTCEEEEECC--
T ss_pred CCCChH--HHHHHHHHc-CCCcccCEEEEcCCH--HH-HHHHHHCCCeEEEECCCC
Confidence 566654 444433333 22333 677777766 33 457888999999998764
No 381
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=31.94 E-value=88 Score=24.23 Aligned_cols=66 Identities=20% Similarity=0.112 Sum_probs=42.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+ .+...+. ..|..+.++..|=++...+-+...+ -++..||-
T Consensus 20 G~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~---~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~ 90 (247)
T 2jah_A 20 GEATARALAAEGAAVAIAARRVEKLR-ALGDELT---AAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVN 90 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHH---hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66788999999999987665554443 2333333 3466777777787776665544433 26766664
No 382
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=31.69 E-value=54 Score=24.06 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhh-------cCccEEEEEeCCc------chHHHHHHHHhcCCcEEEEccCC
Q 039912 58 DVLLRNHLVITHK-------RRIEYLVVVSDDS------DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 58 D~ALkrhm~~m~~-------~gv~clvLVSDds------dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
..||...+..+.. ..-..|||+||-. +...+++.+++.|++..+||=+.
T Consensus 89 ~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~ 150 (198)
T 1n3y_A 89 ATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGL 150 (198)
T ss_dssp HHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESG
T ss_pred HHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccc
Confidence 4467665533211 1245699999842 34788999999998877776653
No 383
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=31.67 E-value=34 Score=27.96 Aligned_cols=61 Identities=5% Similarity=-0.004 Sum_probs=30.8
Q ss_pred hHhhhcceEEEecC-CC--cchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc
Q 039912 38 GELKRGGLWVRTAS-DK--PQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK 98 (198)
Q Consensus 38 ~ELrRAGv~VrtVs-dK--PqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~ 98 (198)
.+|++.|.-|-... .. |.+.+.-....+..+...+.+-|++.+...+...+++.|++.|+.
T Consensus 142 ~~~~~~g~~v~~~~~~~~~~~~~~~d~~~~l~~i~~~~~~vii~~~~~~~~~~~~~qa~~~g~~ 205 (376)
T 3hsy_A 142 DSAAEKKWQVTAINVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKH 205 (376)
T ss_dssp HHHHHHTCEEEEEECTTCC--------------------CEEEEESCHHHHHHHHHHHHHHTSS
T ss_pred HHhhhcCCeEEEEEeccccccccchhHHHHHHHHhhCCCeEEEEECCHHHHHHHHHHHHHcccC
Confidence 35566786654221 11 112233445555555566889999999999999999999999984
No 384
>2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens}
Probab=31.62 E-value=1.3e+02 Score=25.50 Aligned_cols=72 Identities=19% Similarity=0.276 Sum_probs=43.9
Q ss_pred CCCchhHhhh---cceEEEecCC---CcchHHHHHHH------HHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEE
Q 039912 33 GNGLIGELKR---GGLWVRTASD---KPQATDVLLRN------HLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTV 100 (198)
Q Consensus 33 gyGLa~ELrR---AGv~VrtVsd---KPqAAD~ALkr------hm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TV 100 (198)
+.||+..|.+ .|+-+..-.+ .|+......+. .|..+.+-|.+ ++++.+..+...+++..++.++...
T Consensus 223 ~GGL~~~L~ema~s~vg~~I~~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~g~g-ll~~v~~~~~~~~~~~l~~~g~~~~ 301 (334)
T 2v9y_A 223 GGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQEGHLSEEEMARTFNCGVG-AVLVVSKEQTEQILRGIQQHKEEAW 301 (334)
T ss_dssp TTHHHHHSGGGSCTTEEEEEEGGGSCCCHHHHHHHHHHTCCHHHHHHHCCTTEE-EEEEECGGGHHHHHHHHHHTTCCEE
T ss_pred CCcHHHHHHHHhhcCeEEEEecccCCCcHHHHHHHHhcCCCHHHHHHHhCCCCC-EEEEECHHHHHHHHHHHHhcCCCeE
Confidence 5699988876 4555443222 22333222211 12223366777 6766677788888888888899888
Q ss_pred EEccC
Q 039912 101 VVGDI 105 (198)
Q Consensus 101 VVGd~ 105 (198)
+||=.
T Consensus 302 ~IG~V 306 (334)
T 2v9y_A 302 VIGSV 306 (334)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 89853
No 385
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=31.60 E-value=89 Score=24.16 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=41.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|..+...|...+ .+..++. ..|..+.++..|=++...+-+...+ + ++..||-
T Consensus 15 G~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 85 (256)
T 1geg_A 15 GKAIALRLVKDGFAVAIADYNDATAK-AVASEIN---QAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVN 85 (256)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHH---HTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHH---hcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 66788899999999987655554443 2333333 3455677777787776665544443 2 5666653
No 386
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=31.52 E-value=62 Score=25.28 Aligned_cols=66 Identities=11% Similarity=0.086 Sum_probs=44.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+. +.. .+...+..+.++..|=++...+-+...+. ++..+|-
T Consensus 19 G~aia~~l~~~G~~V~~~~r~~~~~~~-~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 89 (257)
T 3imf_A 19 GKGMATRFAKEGARVVITGRTKEKLEE-AKL---EIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILIN 89 (257)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHH---HHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH---HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999876665554433 333 23345667888888888877666555442 6766664
No 387
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=31.40 E-value=31 Score=31.44 Aligned_cols=37 Identities=16% Similarity=0.068 Sum_probs=33.7
Q ss_pred hcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 70 KRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.....|+|...+-.+...+++.|++.+++-+|.|.+.
T Consensus 56 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh 92 (530)
T 2y3s_A 56 VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGH 92 (530)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCC
T ss_pred cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCC
Confidence 4457889999999999999999999999999999876
No 388
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=31.34 E-value=59 Score=24.61 Aligned_cols=67 Identities=15% Similarity=0.047 Sum_probs=41.2
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..++..|.+.|..|..+...+...+. +..++. ...+....++..|=++...+-+...+ .++..||-
T Consensus 15 G~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 86 (250)
T 2cfc_A 15 GLAIATRFLARGDRVAALDLSAETLEE-TARTHW--HAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVN 86 (250)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHS--TTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 667889999999998876655554433 223221 12355667777787777665544433 26766664
No 389
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=31.28 E-value=1.3e+02 Score=23.69 Aligned_cols=70 Identities=14% Similarity=0.090 Sum_probs=44.4
Q ss_pred CCCchhHhhhcceEEEecCCCc---------chHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCc
Q 039912 33 GNGLIGELKRGGLWVRTASDKP---------QATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLK 98 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKP---------qAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~ 98 (198)
|..+|..|.+.|..|-.+...+ ......+......+...+..+.++..|-++...+-+...+ -.+.
T Consensus 24 G~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 103 (277)
T 3tsc_A 24 GRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLD 103 (277)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6778999999999998653310 0011223333333335677888999999998887766655 2566
Q ss_pred EEEE
Q 039912 99 TVVV 102 (198)
Q Consensus 99 TVVV 102 (198)
.+|-
T Consensus 104 ~lvn 107 (277)
T 3tsc_A 104 IIVA 107 (277)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 390
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=31.27 E-value=26 Score=27.87 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=44.9
Q ss_pred CCchhHhhhc-ceEE-EecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 34 NGLIGELKRG-GLWV-RTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 34 yGLa~ELrRA-Gv~V-rtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
-+++..++++ |.-| ...+-.|...| ...++..+...+.+.|++.+-..+...+++.+++.|+..-++|-
T Consensus 158 ~~~~~~~~~~~g~~vv~~~~~~~~~~d--~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 228 (353)
T 4gnr_A 158 KGIAKSFRESYKGEIVADETFVAGDTD--FQAALTKMKGKDFDAIVVPGYYNEAGKIVNQARGMGIDKPIVGG 228 (353)
T ss_dssp HHHHHHHHHHCCSEEEEEEEECTTCCC--CHHHHHHHHTSCCSEEECCSCHHHHHHHHHHHHHTTCCSCEEEC
T ss_pred HHHHHHHHHHcCCEEEEEEeeCCCCCC--HHHHHHHHHhcCCCEEEEecCcHHHHHHHHHHHHcCCCCcEEEe
Confidence 3466666654 4333 22111222332 23344455578999999999999999999999999998766654
No 391
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=31.18 E-value=78 Score=25.13 Aligned_cols=63 Identities=13% Similarity=0.113 Sum_probs=41.6
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh-----cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL-----RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~-----r~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++....+.. ..|..+.++..|=++...+-+...+ -++..||-
T Consensus 40 G~aia~~la~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 107 (266)
T 3grp_A 40 GEAIARCFHAQGAIVGLHGTREDKLKEIAA-------DLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVN 107 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999876655544433221 2366777888888887766555543 26766664
No 392
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=31.14 E-value=30 Score=30.45 Aligned_cols=37 Identities=14% Similarity=0.004 Sum_probs=33.9
Q ss_pred hcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 70 KRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.....|+|...+-.+...+++.|++.+++-+|.|.++
T Consensus 36 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 72 (459)
T 2bvf_A 36 LQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGH 72 (459)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCc
Confidence 4557889999999999999999999999999999986
No 393
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.13 E-value=90 Score=24.46 Aligned_cols=66 Identities=21% Similarity=0.148 Sum_probs=43.4
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcC-ccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRR-IEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~g-v~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+ ...+. ..+ ..+.++..|=++...+-+...+. ++..+|-
T Consensus 23 G~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvn 94 (262)
T 3pk0_A 23 GRGIATVFARAGANVAVAGRSTADIDAC-VADLD---QLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCA 94 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHH---TTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHH---hhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 6678899999999998776665554333 33333 334 56778888888877665554432 6766664
No 394
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=31.11 E-value=1.1e+02 Score=26.46 Aligned_cols=49 Identities=8% Similarity=0.032 Sum_probs=34.5
Q ss_pred chHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 55 QATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 55 qAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.+|+.+|++... +...|.++|+|-+=.++. +-+.+++-.+-|+.||-+.
T Consensus 158 ~~a~~~i~rA~a-~~eAGA~~ivlE~vp~~~--a~~it~~l~iP~igIGaG~ 206 (275)
T 1o66_A 158 GKAQALLNDAKA-HDDAGAAVVLMECVLAEL--AKKVTETVSCPTIGIGAGA 206 (275)
T ss_dssp -CHHHHHHHHHH-HHHTTCSEEEEESCCHHH--HHHHHHHCSSCEEEESSCS
T ss_pred HHHHHHHHHHHH-HHHcCCcEEEEecCCHHH--HHHHHHhCCCCEEEECCCC
Confidence 457778777654 447899999998855433 3355666789999998654
No 395
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor, DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A {Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB: 4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A* 1e60_A* 1e18_A* 1dms_A*
Probab=31.02 E-value=36 Score=31.67 Aligned_cols=48 Identities=6% Similarity=0.036 Sum_probs=35.5
Q ss_pred cCccEEEEEeCCcc-------------hHHHHHHHHhcCCcEEEEccCCCccccchh-ccccc
Q 039912 71 RRIEYLVVVSDDSD-------------FVEVLLEANLRCLKTVVVGDINDGALKRIS-YACFS 119 (198)
Q Consensus 71 ~gv~clvLVSDdsd-------------F~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~A-D~~fs 119 (198)
..-+|||++--+.- +...|+.||++|.+.|||.=.- ....+.| |.|++
T Consensus 176 ~~ad~il~~G~N~~~~~~~~~~~~~~~~~~~l~~a~~~G~klivIDPr~-t~ta~~aad~~l~ 237 (780)
T 1eu1_A 176 ENTDLMVFWAADPMKTNEIGWVIPDHGAYAGMKALKEKGTRVIAINPVR-TETADYFGADVVS 237 (780)
T ss_dssp HHCSEEEEESCCHHHHTTCCSSBCCCHHHHHHHHHHHHTCEEEEESSBC-CHHHHHHTCEEEC
T ss_pred hhCCEEEEECCCHHHhcCCCCcccccchHHHHHHHHHCCCeEEEECCCC-CCcccccCCEEee
Confidence 35788999876642 2246888999999999997543 4567776 99987
No 396
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=30.88 E-value=72 Score=24.36 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhcCccEEEEEeCC----------------cchHHHHHHHHhcCCc
Q 039912 59 VLLRNHLVITHKRRIEYLVVVSDD----------------SDFVEVLLEANLRCLK 98 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv~clvLVSDd----------------sdF~~~Lr~Ar~r~l~ 98 (198)
..+++.+......|+.+|++.+.. ..|..+...|++.|++
T Consensus 83 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 138 (275)
T 3qc0_A 83 DDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVP 138 (275)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 456666776667888888887631 1145556667778875
No 397
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=30.77 E-value=32 Score=27.02 Aligned_cols=73 Identities=12% Similarity=0.080 Sum_probs=37.5
Q ss_pred CCCchhHhhhcceEEEecCCCcch-----HHHHHHHHHH-HHhhcCccEEEEEeCCcc------------------hHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQA-----TDVLLRNHLV-ITHKRRIEYLVVVSDDSD------------------FVEV 88 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqA-----AD~ALkrhm~-~m~~~gv~clvLVSDdsd------------------F~~~ 88 (198)
|.-|+.+|.+.|..|..+...+.. .|..=...+. .+...+++.||-..-... ...+
T Consensus 15 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l 94 (315)
T 2ydy_A 15 GRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 94 (315)
T ss_dssp HHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-------------------CHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHH
Confidence 456788899999888865533322 2322112222 121226788775432211 1357
Q ss_pred HHHHHhcCCcEEEEccC
Q 039912 89 LLEANLRCLKTVVVGDI 105 (198)
Q Consensus 89 Lr~Ar~r~l~TVVVGd~ 105 (198)
++.|++.+++-|.++-.
T Consensus 95 ~~a~~~~~~~~v~~SS~ 111 (315)
T 2ydy_A 95 AKEAAAVGAFLIYISSD 111 (315)
T ss_dssp HHHHHHHTCEEEEEEEG
T ss_pred HHHHHHcCCeEEEEchH
Confidence 88888888877777754
No 398
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=30.73 E-value=1e+02 Score=23.04 Aligned_cols=66 Identities=11% Similarity=0.089 Sum_probs=39.3
Q ss_pred CCCchhHhhhcceEEEec-CCCcchHHHHHHHHHHHHhhcCccEEE-EEeCCcchHHHHHHHH---h--cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTA-SDKPQATDVLLRNHLVITHKRRIEYLV-VVSDDSDFVEVLLEAN---L--RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtV-sdKPqAAD~ALkrhm~~m~~~gv~clv-LVSDdsdF~~~Lr~Ar---~--r~l~TVVV 102 (198)
|..++.+|.+.|..|..+ ...|+..+ .+...+. ..|..+.. +..|=++...+-+... + .++..||-
T Consensus 14 G~~~a~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~ 86 (245)
T 2ph3_A 14 GRAIALRLAEDGFALAIHYGQNREKAE-EVAEEAR---RRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVN 86 (245)
T ss_dssp HHHHHHHHHTTTCEEEEEESSCHHHHH-HHHHHHH---HTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHH---hcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 667889999999999876 44444332 2333333 34555555 6667777665544433 2 26766663
No 399
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=30.57 E-value=43 Score=30.36 Aligned_cols=64 Identities=6% Similarity=-0.077 Sum_probs=43.8
Q ss_pred hhhcceEEEecCCCcc---hHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---hcCCcEEEEc
Q 039912 40 LKRGGLWVRTASDKPQ---ATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---LRCLKTVVVG 103 (198)
Q Consensus 40 LrRAGv~VrtVsdKPq---AAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~r~l~TVVVG 103 (198)
+.+.|-...|-..||- .-+.-.++-...+.+.||++||.+-.|--|....++++ ++|.+.-|||
T Consensus 69 ~~~GGtiLGSsR~~~~~~~~~~~~~~~~~~~l~~~~Id~Lv~IGGdgS~~~A~~L~~~~~~~g~~i~vIG 138 (419)
T 3hno_A 69 RYTPSGAFGSCRYKLKSLEQNRREYERLIEVFKAHDIGYFFYNGGGDSADTCLKVSQLSGTLGYPIQAIH 138 (419)
T ss_dssp GGCCSCTTCCCCCC------CHHHHHHHHHHHHHTTEEEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HcCCCceecCCCCCccccccCHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEE
Confidence 4667766666555552 12233444444677899999999999999999988887 4676666666
No 400
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=30.56 E-value=29 Score=31.34 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=34.1
Q ss_pred hcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 70 KRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.....|+|...+-.+...+++.|++.+++-+|.|.++
T Consensus 53 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh 89 (521)
T 2ipi_A 53 RGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGH 89 (521)
T ss_dssp CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred cCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 4567899999999999999999999999999999876
No 401
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=30.47 E-value=96 Score=22.01 Aligned_cols=20 Identities=20% Similarity=0.328 Sum_probs=14.2
Q ss_pred chhHhhhcceEEEecCCCcc
Q 039912 36 LIGELKRGGLWVRTASDKPQ 55 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPq 55 (198)
+-.+|++.|+.+-.+|..|.
T Consensus 99 ~l~~l~~~g~~~~i~t~~~~ 118 (206)
T 2b0c_A 99 IMHKLREQGHRVVVLSNTNR 118 (206)
T ss_dssp HHHHHHHTTCEEEEEECCCC
T ss_pred HHHHHHHCCCeEEEEECCCh
Confidence 34567778888877777665
No 402
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=30.38 E-value=78 Score=26.02 Aligned_cols=58 Identities=17% Similarity=0.078 Sum_probs=43.8
Q ss_pred HHHHHHhhcCccEEEEEeCCcchH----HHHHHHHhcCCcEEEEccCCCccccchhcccccHH
Q 039912 63 NHLVITHKRRIEYLVVVSDDSDFV----EVLLEANLRCLKTVVVGDINDGALKRISYACFSWW 121 (198)
Q Consensus 63 rhm~~m~~~gv~clvLVSDdsdF~----~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW~ 121 (198)
..|......|-+.++|++-|+-|. .+++.++++|+...||=..+ ....=.|-+.+||.
T Consensus 83 ~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiS-s~~aa~a~~Gipl~ 144 (280)
T 1s4d_A 83 LRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGIT-AGIGGLAYAGIPVT 144 (280)
T ss_dssp HHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCC-TTTHHHHHTTCCSC
T ss_pred HHHHHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCcc-HHHHHHHHcCCCcc
Confidence 334433356888899999887654 47888889999999998876 56667788888884
No 403
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=30.14 E-value=93 Score=24.41 Aligned_cols=66 Identities=17% Similarity=0.047 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..++..|.+.|..|..+...+..... +...+... .+..+.++..|=++...+-+...+. .+..||
T Consensus 39 G~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li 109 (302)
T 1w6u_A 39 GKGMTTLLSSLGAQCVIASRKMDVLKA-TAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVI 109 (302)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHHh--cCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 667889999999999877666654433 33333321 1556677778878777665555442 455555
No 404
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=29.80 E-value=47 Score=24.86 Aligned_cols=47 Identities=13% Similarity=0.060 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhh-------cCccEEEEEeCCcc-----hHHHHHHHHhcCCcEEEEcc
Q 039912 58 DVLLRNHLVITHK-------RRIEYLVVVSDDSD-----FVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 58 D~ALkrhm~~m~~-------~gv~clvLVSDdsd-----F~~~Lr~Ar~r~l~TVVVGd 104 (198)
..||...+..+.. .....|||+||-.. ...+.+.+++.|++..+||-
T Consensus 87 ~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igv 145 (200)
T 1v7p_C 87 FGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAV 145 (200)
T ss_dssp HHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEe
Confidence 3466665553221 12346999998432 45678888999988877775
No 405
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=29.73 E-value=96 Score=24.72 Aligned_cols=68 Identities=10% Similarity=-0.041 Sum_probs=41.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+....+..-..+...+.. ..+..+.++..|=++...+-+...+. ++..||-
T Consensus 38 G~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 110 (281)
T 3v2h_A 38 GLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAG--LSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVN 110 (281)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHT--TCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhh--ccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 66789999999999987655333222233333331 12566777778888776665555442 6666553
No 406
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=29.73 E-value=43 Score=25.60 Aligned_cols=33 Identities=12% Similarity=0.284 Sum_probs=24.5
Q ss_pred ccEEEEEeCCc-----chHHHHHHHHhcCCcEEEEccC
Q 039912 73 IEYLVVVSDDS-----DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 73 v~clvLVSDds-----dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
-..|||+||-. +...+++.+++.|++..+||=+
T Consensus 125 ~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG 162 (223)
T 2b2x_A 125 KKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAIL 162 (223)
T ss_dssp EEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEEC
T ss_pred CeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 34699999843 2567888899999887777754
No 407
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=29.62 E-value=35 Score=26.45 Aligned_cols=70 Identities=10% Similarity=0.089 Sum_probs=43.6
Q ss_pred CCCchhHhhhcceEEEecCCCc-chHH-HHHHHHHHHHhhcCccEEEEEeCCcc------------------hHHHHHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKP-QATD-VLLRNHLVITHKRRIEYLVVVSDDSD------------------FVEVLLEA 92 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKP-qAAD-~ALkrhm~~m~~~gv~clvLVSDdsd------------------F~~~Lr~A 92 (198)
|-.|+..|.+.|..|..+...+ ...| .++.+.+. ..+++.||-..-... ...+++.|
T Consensus 25 G~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~---~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~ 101 (292)
T 1vl0_A 25 GREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFN---EKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAA 101 (292)
T ss_dssp HHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHH---HHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHH---hcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 5567889999999998654321 1222 13333222 228999887654332 24678888
Q ss_pred HhcCCcEEEEccC
Q 039912 93 NLRCLKTVVVGDI 105 (198)
Q Consensus 93 r~r~l~TVVVGd~ 105 (198)
++.+++-|.++-.
T Consensus 102 ~~~~~~iv~~SS~ 114 (292)
T 1vl0_A 102 YSVGAEIVQISTD 114 (292)
T ss_dssp HHHTCEEEEEEEG
T ss_pred HHcCCeEEEechH
Confidence 8888877777653
No 408
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=29.58 E-value=46 Score=28.46 Aligned_cols=73 Identities=16% Similarity=0.068 Sum_probs=41.7
Q ss_pred CCCc----hhHhhhcc-eEEEecCCCcchHHH---HHHHHHHHHhhcCccEEEE--EeCCcch---HHHHHHHHhcCCcE
Q 039912 33 GNGL----IGELKRGG-LWVRTASDKPQATDV---LLRNHLVITHKRRIEYLVV--VSDDSDF---VEVLLEANLRCLKT 99 (198)
Q Consensus 33 gyGL----a~ELrRAG-v~VrtVsdKPqAAD~---ALkrhm~~m~~~gv~clvL--VSDdsdF---~~~Lr~Ar~r~l~T 99 (198)
|.|. ..+|++-| =.|-.|.|+-. ... .+.+=..++.+.|+++.++ |.-++.+ ..+++.+++.+...
T Consensus 17 G~g~~~~l~~~l~~~g~~~~livtd~~~-~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~ 95 (387)
T 3bfj_A 17 GPNAISVVGERCQLLGGKKALLVTDKGL-RAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDI 95 (387)
T ss_dssp STTGGGGHHHHHHHTTCSEEEEECCTTT-C--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHHHHcCCCEEEEEECcch-hhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCE
Confidence 5554 34456656 34556667433 222 2333222665778988655 3344444 45667778889987
Q ss_pred EE-EccCC
Q 039912 100 VV-VGDIN 106 (198)
Q Consensus 100 VV-VGd~~ 106 (198)
|| ||.++
T Consensus 96 IIavGGGs 103 (387)
T 3bfj_A 96 IVTVGGGS 103 (387)
T ss_dssp EEEEESHH
T ss_pred EEEeCCcc
Confidence 77 78765
No 409
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=29.54 E-value=35 Score=29.40 Aligned_cols=36 Identities=11% Similarity=0.155 Sum_probs=31.9
Q ss_pred CccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCC
Q 039912 72 RIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIND 107 (198)
Q Consensus 72 gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~ 107 (198)
-.++++...+-.+...+++.|++.++.-+++|.++.
T Consensus 54 ~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsn 89 (322)
T 3tx1_A 54 AADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSN 89 (322)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTT
T ss_pred eeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccC
Confidence 457788889999999999999999999999998863
No 410
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=29.43 E-value=1.8e+02 Score=24.77 Aligned_cols=36 Identities=17% Similarity=0.052 Sum_probs=24.4
Q ss_pred HHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEE-Ecc
Q 039912 67 ITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVV-VGD 104 (198)
Q Consensus 67 ~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVV-VGd 104 (198)
.+-+. +.+.+-.+ +..+..-++.|.+.|...+| ||+
T Consensus 350 ~Lr~~-i~v~~d~~-~~~~~~~~~~a~~~g~p~~iivG~ 386 (421)
T 1h4v_B 350 ALRPR-LRAEYALA-PRKPAKGLEEALKRGAAFAGFLGE 386 (421)
T ss_pred HHHhc-CEEEEecC-CCCHHHHHHHHHhCCCCEEEEECc
Confidence 34344 55544333 35799999999999998765 676
No 411
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=29.35 E-value=46 Score=25.58 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=23.0
Q ss_pred CCcchHHHHHHHHhcCCcEEEEc-----cCCC
Q 039912 81 DDSDFVEVLLEANLRCLKTVVVG-----DIND 107 (198)
Q Consensus 81 DdsdF~~~Lr~Ar~r~l~TVVVG-----d~~~ 107 (198)
.+.++..+.+..++.++..|||| |++.
T Consensus 38 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~ 69 (138)
T 1nu0_A 38 GTPDWNIIERLLKEWQPDEIIVGLPLNMDGTE 69 (138)
T ss_dssp TEECHHHHHHHHHHHCCSEEEEEEEECTTSCB
T ss_pred cchHHHHHHHHHHHcCCCEEEEecccCCCcCc
Confidence 35678999999999999999999 7653
No 412
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=29.28 E-value=86 Score=26.00 Aligned_cols=47 Identities=17% Similarity=0.173 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhhcCccEEEEEeCCcc--------hHHHHHHHHhcCCcEEEEccCC
Q 039912 59 VLLRNHLVITHKRRIEYLVVVSDDSD--------FVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv~clvLVSDdsd--------F~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.+|++|+.-++..||+.|++..--.+ ...+++.+.+..-+ |++|=++
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~ 73 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVAS 73 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCC
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCC
Confidence 47889999777889999887654444 45788888886555 8888764
No 413
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=29.10 E-value=1.1e+02 Score=23.01 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhh-----cCccEEEEEeCCc-------chHHHHHHHHhcCCcEEEEccCC
Q 039912 58 DVLLRNHLVITHK-----RRIEYLVVVSDDS-------DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 58 D~ALkrhm~~m~~-----~gv~clvLVSDds-------dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
..||...+..+-. .....|||+||-. +.....+.+++.|+...+||-+.
T Consensus 96 ~~aL~~a~~~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~ 156 (202)
T 1ijb_A 96 SEVLKYTLFQIFSKIDRPEASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGP 156 (202)
T ss_dssp HHHHHHHHHHTSSSCSCTTSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEEST
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4466654433322 2345699999843 45677788889998877776553
No 414
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=29.09 E-value=1.3e+02 Score=20.20 Aligned_cols=67 Identities=7% Similarity=0.092 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeC--CcchHHHHHHHHh----cCCcEEEEccCC
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSD--DSDFVEVLLEANL----RCLKTVVVGDIN 106 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSD--dsdF~~~Lr~Ar~----r~l~TVVVGd~~ 106 (198)
...|...|.+.|+.|.++++-.+|- ..+. ....+.|++=.+ +.+-.++++.-|+ .++..|++.+..
T Consensus 21 ~~~l~~~L~~~g~~v~~~~~~~~a~-~~l~-------~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 92 (147)
T 2zay_A 21 LAASISALSQEGFDIIQCGNAIEAV-PVAV-------KTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRA 92 (147)
T ss_dssp GHHHHHHHHHHTEEEEEESSHHHHH-HHHH-------HHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSC
T ss_pred HHHHHHHHHHcCCeEEEeCCHHHHH-HHHH-------cCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCC
Confidence 4567778889999999876633332 1222 235776666433 2344566777776 467788888764
Q ss_pred C
Q 039912 107 D 107 (198)
Q Consensus 107 ~ 107 (198)
+
T Consensus 93 ~ 93 (147)
T 2zay_A 93 T 93 (147)
T ss_dssp C
T ss_pred C
Confidence 3
No 415
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=29.07 E-value=76 Score=25.34 Aligned_cols=63 Identities=17% Similarity=0.063 Sum_probs=41.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++....+... + +..+.++..|=++...+-+...+. .+..||-
T Consensus 41 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn 108 (272)
T 4dyv_A 41 GRAVAVALAGAGYGVALAGRRLDALQETAAE----I---GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFN 108 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----H---TSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----h---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6778899999999998766655544333222 2 456677778888777766655442 6766654
No 416
>3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A*
Probab=29.07 E-value=1.3e+02 Score=25.63 Aligned_cols=72 Identities=21% Similarity=0.344 Sum_probs=45.0
Q ss_pred CCCchhHhhh---cceEEEecCC---CcchHHHHHH------HHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCC-cE
Q 039912 33 GNGLIGELKR---GGLWVRTASD---KPQATDVLLR------NHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCL-KT 99 (198)
Q Consensus 33 gyGLa~ELrR---AGv~VrtVsd---KPqAAD~ALk------rhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l-~T 99 (198)
|.||+..|.| .|+-+..=.+ .|+...+..+ ..|..+.+.|.. ||++....+...+++..++.|+ ..
T Consensus 257 ggGL~~~L~ei~~sgvg~~I~~~~iP~~~~~~~~~~~~~~~~~e~~~~~~~g~g-ll~~v~~~~~~~~~~~l~~~g~~~a 335 (350)
T 3m84_A 257 GGGFIENIPRVLPQGLGAQIDKDSFATPAIFKLMQRIGDISEFEMYRSFNMGIG-MTIIASQDQFDKMQELAKKHTNTKL 335 (350)
T ss_dssp TTHHHHHHHHHSCTTCEEEECGGGSCCCHHHHHHHHHHTCCHHHHHHHCCTTEE-EEEEECGGGHHHHHHHHTTCTTSCE
T ss_pred CccHHHHHHHHhhhCceEEEEcccCCCcHHHHHHHHhcCCCHHHHHHHHhCCCC-EEEEECHHHHHHHHHHHHhcCCCCe
Confidence 7999998877 4665553222 2333322222 122223344543 7777777788889999999999 88
Q ss_pred EEEccC
Q 039912 100 VVVGDI 105 (198)
Q Consensus 100 VVVGd~ 105 (198)
.+||=.
T Consensus 336 ~~IG~V 341 (350)
T 3m84_A 336 YQIGKI 341 (350)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 899864
No 417
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=29.03 E-value=83 Score=26.19 Aligned_cols=56 Identities=18% Similarity=0.090 Sum_probs=43.7
Q ss_pred HHHHHhhcCccEEEEEeCCcchH----HHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 64 HLVITHKRRIEYLVVVSDDSDFV----EVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 64 hm~~m~~~gv~clvLVSDdsdF~----~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
.|......|-+.++|+|-|+-|. .+++.+++.|+...||-..+ ....=.|-+.+||
T Consensus 94 ~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiS-S~~aa~a~~Gipl 153 (294)
T 2ybo_A 94 LLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVT-AASGCSTYAGIPL 153 (294)
T ss_dssp HHHHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCC-HHHHHHHHTTCCS
T ss_pred HHHHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHH-HHHHHHHHcCCCc
Confidence 33333356888899999998764 47888889999999998877 5667788888998
No 418
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=28.99 E-value=22 Score=24.33 Aligned_cols=31 Identities=16% Similarity=0.144 Sum_probs=16.2
Q ss_pred CccEEEEEeCCc-c-hHHHHHHHHhcCCcEEEE
Q 039912 72 RIEYLVVVSDDS-D-FVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 72 gv~clvLVSDds-d-F~~~Lr~Ar~r~l~TVVV 102 (198)
+++.++....+. . -..+...|++.+...||+
T Consensus 70 ~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 102 (144)
T 2hmt_A 70 NFEYVIVAIGANIQASTLTTLLLKELDIPNIWV 102 (144)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEE
Confidence 456555554432 2 234556667766664443
No 419
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=28.93 E-value=87 Score=25.89 Aligned_cols=49 Identities=18% Similarity=0.125 Sum_probs=29.8
Q ss_pred CchhHhhhcceEEE--ecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHH-HhcCC
Q 039912 35 GLIGELKRGGLWVR--TASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEA-NLRCL 97 (198)
Q Consensus 35 GLa~ELrRAGv~Vr--tVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~A-r~r~l 97 (198)
.+..+++++|..|. ||.+. ..|..+...||+.|+ +|.++ .++.. +++|+
T Consensus 259 ~~v~~~~~~Gl~V~~WTVn~~---------~~~~~l~~~GVDgIi--TD~P~---~~~~~l~~~g~ 310 (313)
T 3l12_A 259 ELVAEAHDLGLIVLTWTVNEP---------EDIRRMATTGVDGIV--TDYPG---RTQRILIDMGL 310 (313)
T ss_dssp HHHHHHHHTTCEEEEBCCCSH---------HHHHHHHHHTCSEEE--ESCHH---HHHHHHHHTTC
T ss_pred HHHHHHHHCCCEEEEEcCCCH---------HHHHHHHHcCCCEEE--eCCHH---HHHHHHHhcCc
Confidence 35667888888776 77652 233345567999986 56554 33333 34655
No 420
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=28.76 E-value=1e+02 Score=21.09 Aligned_cols=31 Identities=13% Similarity=-0.249 Sum_probs=23.6
Q ss_pred ccEEEEEeCCcchHHHHHHHHhcCCcEEEEccC
Q 039912 73 IEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 73 v~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
+++.+. . .+-...+++.|++.+..-||+|-.
T Consensus 88 ~~~~~~-~-g~~~~~I~~~a~~~~~dliV~G~~ 118 (138)
T 1q77_A 88 PGVEYR-I-GPLSEEVKKFVEGKGYELVVWACY 118 (138)
T ss_dssp CCEEEE-C-SCHHHHHHHHHTTSCCSEEEECSC
T ss_pred ceEEEE-c-CCHHHHHHHHHHhcCCCEEEEeCC
Confidence 555543 3 345678999999999999999975
No 421
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=28.75 E-value=33 Score=31.10 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=45.1
Q ss_pred hHhhhcceEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 38 GELKRGGLWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 38 ~ELrRAGv~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
+-|...|..|-+..| |.=. .+. .+.. ........|+|...+-.+...+++.|++.+++-+|.|.++
T Consensus 25 ~~l~~~~~~v~~p~d-~~Y~-~~~-~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 25 RCLPPAGPVKVTPDD-PRYL-NLK-LRGANSRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp -CCCCCCCEEECTTS-TTHH-HHH-TCSSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred hhcccCCCeEECCCC-cchH-HHH-hhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 446666766666433 4321 122 0111 2224557899999999999999999999999999999876
No 422
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=28.72 E-value=50 Score=27.86 Aligned_cols=70 Identities=11% Similarity=0.041 Sum_probs=43.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHH---HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDV---LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~---ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++.... .|......+...|..++++..|=++...+-+.+.+. ++..||-
T Consensus 58 G~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVn 135 (346)
T 3kvo_A 58 GKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVN 135 (346)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 566889999999998766544432110 122222233356778888888888887766655543 6776664
No 423
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=28.64 E-value=41 Score=29.10 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=0.0
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD 82 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd 82 (198)
++.+||.+|+.|.+-.... -+..++......|+.++|+|.++
T Consensus 351 l~~~Lr~~Gi~v~~d~~~~-----~~~~~~~~a~~~g~~~~iiiG~~ 392 (434)
T 1wu7_A 351 YSRKLRERGMNVTVEIMER-----GLSAQLKYASAIGADFAVIFGER 392 (434)
T ss_dssp HHHHHHTTTCEEEECCSCC-----CHHHHHHHHHHTTCSEEEEEEHH
T ss_pred HHHHHHHCCCeEEEecCCC-----CHHHHHHHHHHCCCCEEEEECch
No 424
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=28.62 E-value=77 Score=26.94 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=27.3
Q ss_pred HhhcCccEEEEEeCCc-----chHHHHHHHHhcCCcEEEEcc
Q 039912 68 THKRRIEYLVVVSDDS-----DFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 68 m~~~gv~clvLVSDds-----dF~~~Lr~Ar~r~l~TVVVGd 104 (198)
|-+....-|||+||-. +=..+-+.|++.|++--+||-
T Consensus 5 ~~~~~~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 5 TREATIRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp HHHCCEEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCCCccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 4345677799999975 457788899998887555554
No 425
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=28.55 E-value=93 Score=22.92 Aligned_cols=19 Identities=16% Similarity=0.104 Sum_probs=10.4
Q ss_pred hhHhhhcceEEEecCCCcch
Q 039912 37 IGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 37 a~ELrRAGv~VrtVsdKPqA 56 (198)
-..|++. +.+-.+|..+..
T Consensus 121 l~~l~~~-~~~~i~Sn~~~~ 139 (229)
T 4dcc_A 121 LLKLREK-YVVYLLSNTNDI 139 (229)
T ss_dssp HHHHTTT-SEEEEEECCCHH
T ss_pred HHHHHhc-CcEEEEECCChH
Confidence 3445555 655566665553
No 426
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=28.44 E-value=28 Score=28.07 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=39.8
Q ss_pred HHHHHhhcCccEEEEEeC------CcchHHHHHHHHhcCCcEEEEccCCCccccchhcccccHHHH
Q 039912 64 HLVITHKRRIEYLVVVSD------DSDFVEVLLEANLRCLKTVVVGDINDGALKRISYACFSWWDI 123 (198)
Q Consensus 64 hm~~m~~~gv~clvLVSD------dsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW~eV 123 (198)
.|......|-+ ++++|| -+-...+++.+++.|+...||=..+ ....=.|-+.+||+.+
T Consensus 75 ~i~~~~~~G~~-Va~ls~~GdP~i~~~g~~l~~~l~~~gi~vevIPGiS-s~~aa~a~~G~p~~~f 138 (242)
T 1wyz_A 75 GYLKPLAGGAS-MGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPS-SIILSVMASGFNGQSF 138 (242)
T ss_dssp HHHHHHHTTCC-EEEECC-------CHHHHHHHHHHHTTCCEEECCCCC-HHHHHHHHHTSCSSSE
T ss_pred HHHHHHHcCCE-EEEEecCCCCcccCcHHHHHHHHHHCCCCEEEeCcHH-HHHHHHHHcCCCCCeE
Confidence 33333344544 667764 3334678888999999999998876 6777778888887765
No 427
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=28.43 E-value=1.8e+02 Score=23.04 Aligned_cols=34 Identities=15% Similarity=-0.118 Sum_probs=22.4
Q ss_pred HHhhcCccEEEEEeC-CcchHHHHHHHHhcCCcEEEEc
Q 039912 67 ITHKRRIEYLVVVSD-DSDFVEVLLEANLRCLKTVVVG 103 (198)
Q Consensus 67 ~m~~~gv~clvLVSD-dsdF~~~Lr~Ar~r~l~TVVVG 103 (198)
.+...+.|+|+ +| ...|. ....|+..|+..|.+.
T Consensus 97 ~l~~~~pD~Vi--~d~~~~~~-~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 97 ALGDNPPDLVV--YDVFPFIA-GRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHTTCCCSEEE--EESTTHHH-HHHHHHHHTCCEEEEE
T ss_pred HHhccCCCEEE--ECchHHHH-HHHHHHhhCCCEEEEe
Confidence 33345778765 45 34444 4557888999999886
No 428
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=28.42 E-value=25 Score=26.33 Aligned_cols=34 Identities=18% Similarity=-0.101 Sum_probs=14.6
Q ss_pred hcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 70 KRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
..|+..+++.+ ...-..+.+.|+++|++ +||..|
T Consensus 92 ~~g~~~i~i~~-~~~~~~l~~~a~~~Gi~--~igpnc 125 (145)
T 2duw_A 92 AIGAKTLWLQL-GVINEQAAVLAREAGLS--VVMDRC 125 (145)
T ss_dssp HHTCCEEECCT-TCCCHHHHHHHHTTTCE--EECSCC
T ss_pred HcCCCEEEEcC-ChHHHHHHHHHHHcCCE--EEcCCe
Confidence 34555433332 22233445555555544 345443
No 429
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=28.41 E-value=1.7e+02 Score=21.39 Aligned_cols=49 Identities=12% Similarity=-0.050 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhh-------cCccEEEEEeCCcc-----hHHHHHHHHhcCCcEEEEccCC
Q 039912 58 DVLLRNHLVITHK-------RRIEYLVVVSDDSD-----FVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 58 D~ALkrhm~~m~~-------~gv~clvLVSDdsd-----F~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
..||..-...+.. .....|||+||-.. ...+++.+++.|+...+||-+.
T Consensus 101 ~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~ 161 (178)
T 2xgg_A 101 SDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGH 161 (178)
T ss_dssp HHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC-
T ss_pred HHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCC
Confidence 3466665554322 12356999999543 4557788888898887777653
No 430
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=28.40 E-value=78 Score=24.96 Aligned_cols=69 Identities=17% Similarity=0.061 Sum_probs=42.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+ ...+...-..+..+.++..|=++...+-+...+. .+..+|-
T Consensus 24 G~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 97 (281)
T 3svt_A 24 GKGVAAGLVAAGASVMIVGRNPDKLAGA-VQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVH 97 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5678899999999998876666555433 3333322111226777777877777665555442 5666653
No 431
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=28.38 E-value=44 Score=29.01 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=29.7
Q ss_pred ccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCCC
Q 039912 73 IEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIND 107 (198)
Q Consensus 73 v~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~~ 107 (198)
.++++...+-.+...+|+.|++.++..+++|.++.
T Consensus 15 a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSn 49 (340)
T 1uxy_A 15 AQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSN 49 (340)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTT
T ss_pred ccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcC
Confidence 45688888888999999999999999999988763
No 432
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=28.29 E-value=69 Score=24.35 Aligned_cols=67 Identities=9% Similarity=0.033 Sum_probs=38.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeC--CcchHHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSD--DSDFVEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSD--dsdF~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+ .+..++... .+..+.++..| .++...+-+... +. .+..||-
T Consensus 27 G~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~--~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~ 100 (247)
T 3i1j_A 27 GAAAARAYAAHGASVVLLGRTEASLA-EVSDQIKSA--GQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLH 100 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHT--TSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEecCHHHHH-HHHHHHHhc--CCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 66788999999999987666555443 444444432 12334444433 355555444433 32 6776664
No 433
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=28.26 E-value=72 Score=26.19 Aligned_cols=31 Identities=10% Similarity=0.238 Sum_probs=24.5
Q ss_pred ccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 73 IEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 73 v~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
++-.++|||..+ +.+++.|++.|+.+.++--
T Consensus 30 ~eI~~Visn~~~-a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 30 CEVALLITDKPG-AKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp SEEEEEEESCSS-SHHHHHHHTTTCCEEECCG
T ss_pred cEEEEEEECCCC-cHHHHHHHHcCCCEEEeCh
Confidence 455778888766 5789999999999988754
No 434
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=28.24 E-value=92 Score=24.19 Aligned_cols=67 Identities=13% Similarity=-0.006 Sum_probs=40.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC--cchHHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD--SDFVEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd--sdF~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+. +..++... .+..+.++..|- ++...+-+... ++ .+..+|-
T Consensus 25 G~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 98 (252)
T 3f1l_A 25 GREAAMTYARYGATVILLGRNEEKLRQ-VASHINEE--TGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLH 98 (252)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHH--HSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhh--cCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 667889999999999876666555433 33444322 233556666665 66655444433 32 5666653
No 435
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=28.21 E-value=67 Score=22.69 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=30.1
Q ss_pred HHhccCCCCCCCchhHhhhcceEEEecCCCcchHHHHHHHHH
Q 039912 24 ARAVLTPEVGNGLIGELKRGGLWVRTASDKPQATDVLLRNHL 65 (198)
Q Consensus 24 Ar~lltPkvgyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm 65 (198)
+..|++...|.+....|.++|+.|-+. .+.-.+.||+.-+
T Consensus 63 v~~vi~~~iG~~a~~~L~~~GI~v~~~--~~~~i~eal~~~~ 102 (116)
T 1rdu_A 63 VEYLIASNVGRNAFETLKAAGVKVYRF--EGGTVQEAIDAFS 102 (116)
T ss_dssp CCEEECSSCCSSCHHHHHTTTCEEECC--CSCBHHHHHHHHH
T ss_pred CCEEEECCCCHhHHHHHHHCCCEEEEC--CCCCHHHHHHHHH
Confidence 456888999999999999999998764 2344566776644
No 436
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=28.18 E-value=94 Score=25.89 Aligned_cols=48 Identities=23% Similarity=0.216 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhcCccEEEEEeC-CcchH-----HHHHHHHhcCCcEEEEccCCC
Q 039912 60 LLRNHLVITHKRRIEYLVVVSD-DSDFV-----EVLLEANLRCLKTVVVGDIND 107 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSD-dsdF~-----~~Lr~Ar~r~l~TVVVGd~~~ 107 (198)
.+.+.+..+.....++|++|.| +.+|. .+++.+...+.++++|+.-.|
T Consensus 155 ~~~~~~~~~~~~~~~iiL~v~~a~~~~~~~~~~~i~~~~~~~~~~~i~V~NK~D 208 (353)
T 2x2e_A 155 QIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLD 208 (353)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEETTSCGGGCHHHHHHHHHCTTCTTEEEEEECGG
T ss_pred HHHHHHHHHHcCCCeEEEEEecCCCccchhHHHHHHHHhCcCCCceEEEecccc
Confidence 4444444554544444444544 33454 466777778999999997654
No 437
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=28.10 E-value=85 Score=24.59 Aligned_cols=48 Identities=13% Similarity=-0.008 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhcCccEEE-EEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 58 DVLLRNHLVITHKRRIEYLV-VVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 58 D~ALkrhm~~m~~~gv~clv-LVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
...|.+....+...|+.+-. .+....+..+.| .|++.+..-||+|-..
T Consensus 85 ~~~l~~~~~~~~~~g~~~~~~~v~~~g~~~~~I-~a~~~~~DliV~G~~g 133 (294)
T 3loq_A 85 EEVLPEVAQKIEAAGIKAEVIKPFPAGDPVVEI-IKASENYSFIAMGSRG 133 (294)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSSCCEECHHHHH-HHHHTTSSEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCcceeEeeccCChhHhe-eeccCCCCEEEEcCCC
Confidence 33444444444466887765 333234556777 8888888888888754
No 438
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=28.08 E-value=83 Score=24.19 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=28.1
Q ss_pred HHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEE
Q 039912 67 ITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVV 101 (198)
Q Consensus 67 ~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVV 101 (198)
.++..|+.||++..+..--..++..|++.++.-++
T Consensus 135 ~~i~~~~~~liit~~~~~~~~v~~~a~~~~~~~i~ 169 (245)
T 3l2b_A 135 ELIELKVSLLIVTGGHTPSKEIIELAKKNNITVIT 169 (245)
T ss_dssp HHHHTTCSEEEECTTCCCCHHHHHHHHHHTCEEEE
T ss_pred HHHHcCCCEEEECCCCCCCHHHHHHHHHcCCeEEE
Confidence 34467999999998888888899999988886544
No 439
>2gm5_A Transposon gamma-delta resolvase; site specific recombination, recombin; 2.10A {Escherichia coli} PDB: 2rsl_A 1gdr_A 1ght_A 1hx7_A
Probab=28.04 E-value=29 Score=25.74 Aligned_cols=50 Identities=10% Similarity=0.114 Sum_probs=24.3
Q ss_pred HHHHHHHHHhhcCccEEEEEe--------CCcchHHHHHHHHhcCCcEEEEccCCCccccch
Q 039912 60 LLRNHLVITHKRRIEYLVVVS--------DDSDFVEVLLEANLRCLKTVVVGDINDGALKRI 113 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVS--------DdsdF~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~ 113 (198)
.|.+|+..+...|+.|.-..+ +.+.|..+|..+++- .+|||=+.+ -|+|.
T Consensus 14 ~l~~Q~~~l~~~g~~~~~~~~D~~Sg~~~~Rp~l~~ll~~~~~g--d~lvV~~ld--RL~R~ 71 (139)
T 2gm5_A 14 SLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVKEG--DVILVKKLD--HLGRD 71 (139)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEC-----CCHHHHHHHHHCCTT--CEEEESSGG--GTSSS
T ss_pred CHHHHHHHHHHCCCceeEEEEECCCCCccccHHHHHHHHHHHCC--CEEEEEecc--cccCC
Confidence 355555544445544322222 245566666655543 466665543 25553
No 440
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=27.97 E-value=1.3e+02 Score=24.46 Aligned_cols=65 Identities=14% Similarity=0.023 Sum_probs=42.1
Q ss_pred CCCchhHhhhcceEEEecCCC----------cchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CC
Q 039912 33 GNGLIGELKRGGLWVRTASDK----------PQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CL 97 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdK----------PqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l 97 (198)
|..+|..|.+.|..|-.+... +..++ .+...+ ...|..+.++.+|=++...+-+...+. .+
T Consensus 40 G~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 115 (322)
T 3qlj_A 40 GRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQ-SVVDEI---TAAGGEAVADGSNVADWDQAAGLIQTAVETFGGL 115 (322)
T ss_dssp HHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHH-HHHHHH---HHTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHCCCEEEEEeCcccccccccccHHHHH-HHHHHH---HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 667889999999999765332 23332 333333 345778888888888877765555442 66
Q ss_pred cEEE
Q 039912 98 KTVV 101 (198)
Q Consensus 98 ~TVV 101 (198)
..||
T Consensus 116 D~lv 119 (322)
T 3qlj_A 116 DVLV 119 (322)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 6555
No 441
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=27.90 E-value=1.5e+02 Score=21.31 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=14.2
Q ss_pred chhHhhhcceEEEecCCCcc
Q 039912 36 LIGELKRGGLWVRTASDKPQ 55 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPq 55 (198)
+-..|+..|+.+-.+|..|.
T Consensus 107 ~l~~l~~~g~~~~i~t~~~~ 126 (233)
T 3umb_A 107 VLRQLREMGLPLGILSNGNP 126 (233)
T ss_dssp HHHHHHTTTCCEEEEESSCH
T ss_pred HHHHHHhCCCcEEEEeCCCH
Confidence 34567778888777777765
No 442
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=27.89 E-value=57 Score=25.32 Aligned_cols=63 Identities=14% Similarity=0.045 Sum_probs=35.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+...+.+... .+..+.++..|=++...+-+... ++ ++..+|-
T Consensus 20 G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 87 (257)
T 3tpc_A 20 GAAVTRMLAQEGATVLGLDLKPPAGEEPAAE-------LGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVN 87 (257)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCC-------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-------hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6778899999999998776666554433322 24456667777777665554444 32 6766663
No 443
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=27.82 E-value=46 Score=25.14 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=24.4
Q ss_pred ccEEEEEeCCc-----chHHHHHHHHhcCCcEEEEccC
Q 039912 73 IEYLVVVSDDS-----DFVEVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 73 v~clvLVSDds-----dF~~~Lr~Ar~r~l~TVVVGd~ 105 (198)
...|||+||-. +...+++.+++.|+...+||=+
T Consensus 110 ~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig 147 (213)
T 1pt6_A 110 KKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAIL 147 (213)
T ss_dssp EEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred CeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 45699999843 2567788889999887777754
No 444
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=27.68 E-value=1e+02 Score=25.69 Aligned_cols=47 Identities=17% Similarity=0.003 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhhcCccEEEEEeCCcc--------hHHHHHHHHhcCCcEEEEccCC
Q 039912 59 VLLRNHLVITHKRRIEYLVVVSDDSD--------FVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv~clvLVSDdsd--------F~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.+|++|+.-++..||+.|++..--.+ ...+++.+.+..-+ |++|=++
T Consensus 20 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~ 74 (293)
T 1w3i_A 20 EKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGG 74 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCC
Confidence 47889999777889999887654444 45788888886555 8877764
No 445
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=27.66 E-value=74 Score=24.02 Aligned_cols=65 Identities=14% Similarity=0.062 Sum_probs=41.1
Q ss_pred CCCchhHhhh-cceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKR-GGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrR-AGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..++..|.+ .|..|..+...+.....++ ..+. ..|....++..|=++...+-+...+. ++..||
T Consensus 17 G~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-~~l~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li 87 (276)
T 1wma_A 17 GLAIVRDLCRLFSGDVVLTARDVTRGQAAV-QQLQ---AEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLV 87 (276)
T ss_dssp HHHHHHHHHHHSSSEEEEEESSHHHHHHHH-HHHH---HTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEeCChHHHHHHH-HHHH---hcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6678888888 8999987766665443332 2232 33556677778888776665554432 565554
No 446
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=27.64 E-value=1.2e+02 Score=21.53 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=14.9
Q ss_pred chhHhhhcceEEEecCCCcch
Q 039912 36 LIGELKRGGLWVRTASDKPQA 56 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqA 56 (198)
+-..|+..| .+-.+|..|..
T Consensus 94 ~l~~l~~~g-~~~i~s~~~~~ 113 (200)
T 3cnh_A 94 LARDLGQRY-RMYSLNNEGRD 113 (200)
T ss_dssp HHHHHTTTS-EEEEEECCCHH
T ss_pred HHHHHHHcC-CEEEEeCCcHH
Confidence 345678889 88888888764
No 447
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=27.60 E-value=99 Score=23.89 Aligned_cols=63 Identities=16% Similarity=0.053 Sum_probs=39.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++.... +.. .+ +-.+.++..|=++...+-+...+. .+..+|-
T Consensus 16 G~a~a~~l~~~G~~V~~~~r~~~~~~~-~~~---~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvn 83 (235)
T 3l6e_A 16 GRALTIGLVERGHQVSMMGRRYQRLQQ-QEL---LL---GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLH 83 (235)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHH---HH---GGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHH-HHH---Hh---cCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 677889999999999877666554432 222 22 224677777877776655544432 5666653
No 448
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=27.59 E-value=86 Score=26.07 Aligned_cols=47 Identities=13% Similarity=-0.044 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhhcCccEEEEEeCCcc--------hHHHHHHHHhcCCcEEEEccCC
Q 039912 59 VLLRNHLVITHKRRIEYLVVVSDDSD--------FVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 59 ~ALkrhm~~m~~~gv~clvLVSDdsd--------F~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.+|++|+.-++..||+.|++..--.+ ...+++.+.+..-+ |++|=++
T Consensus 20 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~ 74 (288)
T 2nuw_A 20 DALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVGS 74 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeCC
Confidence 47899999777889999987654444 45788888886555 8888654
No 449
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=27.58 E-value=1.2e+02 Score=23.61 Aligned_cols=63 Identities=16% Similarity=0.038 Sum_probs=40.1
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|..+...++..+.... ..+-.+.++..|=++...+-+...+. ++..||-
T Consensus 18 G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~ 85 (281)
T 3m1a_A 18 GRAIAEAAVAAGDTVIGTARRTEALDDLVA-------AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVN 85 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGGHHHHH-------HCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------hccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 567889999999999877666665543322 12445566667777766655544432 6766654
No 450
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=27.55 E-value=36 Score=30.22 Aligned_cols=43 Identities=23% Similarity=0.358 Sum_probs=33.4
Q ss_pred CchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCC
Q 039912 35 GLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDD 82 (198)
Q Consensus 35 GLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDd 82 (198)
.++.+||++|+.|.+-.. + ..+++++...+..|+.++++|.++
T Consensus 389 ~la~~LR~~Gi~ve~d~~-~----~sl~~q~k~A~~~g~p~~iiiG~~ 431 (465)
T 3net_A 389 KVSQQLRQAGLNVITNFE-K----RQLGKQFQAADKQGIRFCVIIGAD 431 (465)
T ss_dssp HHHHHHHHTTCCEEECCS-C----CCHHHHHHHHHHHTCCEEEECCHH
T ss_pred HHHHHHHHCCCEEEEEeC-C----CCHHHHHHHHHHcCCCEEEEECch
Confidence 478999999999987432 2 246777777778899999998864
No 451
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=27.45 E-value=79 Score=24.58 Aligned_cols=63 Identities=14% Similarity=0.049 Sum_probs=40.5
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+... + +..+..+..|=++...+-+...+ + .+..+|-
T Consensus 19 G~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 86 (247)
T 3rwb_A 19 GKAIAARLAADGATVIVSDINAEGAKAAAAS----I---GKKARAIAADISDPGSVKALFAEIQALTGGIDILVN 86 (247)
T ss_dssp HHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----H---CTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----h---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 6678899999999998766655544333222 2 55677777777776665554443 2 6766664
No 452
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=27.44 E-value=39 Score=30.65 Aligned_cols=37 Identities=14% Similarity=-0.014 Sum_probs=33.6
Q ss_pred hcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 70 KRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
...-.|+|...+-.+...+++.|++.+++-+|.|.++
T Consensus 32 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh 68 (501)
T 3pop_A 32 VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGH 68 (501)
T ss_dssp CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCC
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCc
Confidence 3456899999999999999999999999999999876
No 453
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=27.32 E-value=1.4e+02 Score=22.73 Aligned_cols=45 Identities=9% Similarity=0.086 Sum_probs=26.4
Q ss_pred chhHhhhcceEEEecC-------CCc---chHHHHHHHHHHHHhhcCccEEEEEe
Q 039912 36 LIGELKRGGLWVRTAS-------DKP---QATDVLLRNHLVITHKRRIEYLVVVS 80 (198)
Q Consensus 36 La~ELrRAGv~VrtVs-------dKP---qAAD~ALkrhm~~m~~~gv~clvLVS 80 (198)
+...|+++|+.+-.+. ..| +++-..+++.+......|+.+|++.+
T Consensus 51 ~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~ 105 (278)
T 1i60_A 51 LAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVP 105 (278)
T ss_dssp HHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 4455667777665321 122 13334566677766678888888764
No 454
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=27.31 E-value=73 Score=24.31 Aligned_cols=58 Identities=22% Similarity=0.214 Sum_probs=43.3
Q ss_pred hcceEEEecCCCcchHHHHHHHHHHHH--hhcCccEEEEEeCCcchHHHHHHHHh--cCCcEEEEcc
Q 039912 42 RGGLWVRTASDKPQATDVLLRNHLVIT--HKRRIEYLVVVSDDSDFVEVLLEANL--RCLKTVVVGD 104 (198)
Q Consensus 42 RAGv~VrtVsdKPqAAD~ALkrhm~~m--~~~gv~clvLVSDdsdF~~~Lr~Ar~--r~l~TVVVGd 104 (198)
+|..-.|||.- .--|++.++.. .+.+|..|+|||.|.++-..-.+|.. -.|+|--|-.
T Consensus 24 kanlelrtvkt-----edelkkyleefrkesqnikvlilvsndeeldkakelaqkmeidvrtrkvts 85 (110)
T 2kpo_A 24 KANLELRTVKT-----EDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTS 85 (110)
T ss_dssp HHTCEEEECCS-----HHHHHHHHHHHTSSTTSEEEEEEESSHHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred hcCceeeeecc-----HHHHHHHHHHHHhhccCeEEEEEEcChHHHHHHHHHHHhhceeeeeeecCC
Confidence 56777788753 33678877744 36789999999999999988888876 5677766543
No 455
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=27.29 E-value=1.1e+02 Score=23.75 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=41.9
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|..+...+...+. +..++... ..+..+.++..|=++...+-+...+. ++..||-
T Consensus 26 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 98 (267)
T 1iy8_A 26 GRATAVRLAAEGAKLSLVDVSSEGLEA-SKAAVLET-APDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFN 98 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHH-CTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhh-cCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999876665554433 33333321 12667777778877766655544432 5666653
No 456
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=27.28 E-value=93 Score=23.88 Aligned_cols=56 Identities=13% Similarity=-0.078 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc--EEEEccCCCccccchhccc
Q 039912 60 LLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK--TVVVGDINDGALKRISYAC 117 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~--TVVVGd~~~~~L~R~AD~~ 117 (198)
.|.+....+..+|+..|+-||-|+.+ .+-+.+++.++. .-++.|.+ +.+.+.-.+.
T Consensus 79 ~l~~~~~~~~~~gv~~vv~Is~d~~~-~~~~f~~~~~~~~~fp~l~D~~-~~va~~yGv~ 136 (184)
T 3uma_A 79 GYLENRDAILARGVDDIAVVAVNDLH-VMGAWATHSGGMGKIHFLSDWN-AAFTKAIGME 136 (184)
T ss_dssp HHHHTHHHHHTTTCCEEEEEESSCHH-HHHHHHHHHTCTTTSEEEECTT-CHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCEEEEEECCCHH-HHHHHHHHhCCCCceEEEEcCc-hHHHHHcCCc
Confidence 45555556667899978888877655 467788889998 88888975 5565544443
No 457
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=27.24 E-value=1.7e+02 Score=22.22 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=29.4
Q ss_pred CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCcEEEEccCC
Q 039912 51 SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 51 sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
..||... .....+..+ +..-+-.+.|-| |. .+ ++-|+..|++||.|+.+.
T Consensus 147 ~~KP~p~--~~~~a~~~l-g~~p~e~l~VgD-s~-~d-i~aA~~aG~~~I~V~~g~ 196 (243)
T 4g9b_A 147 NSKPDPE--IFLAACAGL-GVPPQACIGIED-AQ-AG-IDAINASGMRSVGIGAGL 196 (243)
T ss_dssp SCTTSTH--HHHHHHHHH-TSCGGGEEEEES-SH-HH-HHHHHHHTCEEEEESTTC
T ss_pred CCCCcHH--HHHHHHHHc-CCChHHEEEEcC-CH-HH-HHHHHHcCCEEEEECCCC
Confidence 3587754 333333333 222222344554 53 45 579999999999998753
No 458
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=27.16 E-value=1.5e+02 Score=22.86 Aligned_cols=50 Identities=10% Similarity=-0.018 Sum_probs=39.7
Q ss_pred hcCccEEEEEeCCcch----HHHHHHHHhcCCcEEEEccCCCccccchhcccccH
Q 039912 70 KRRIEYLVVVSDDSDF----VEVLLEANLRCLKTVVVGDINDGALKRISYACFSW 120 (198)
Q Consensus 70 ~~gv~clvLVSDdsdF----~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW 120 (198)
..|-+..+|+|-|+-| ..+++.++++|+...||-..+ ....=.|-+.+||
T Consensus 92 ~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiS-s~~aa~a~~g~pl 145 (232)
T 2qbu_A 92 EDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVT-SFTACAATAGRTL 145 (232)
T ss_dssp HTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCC-HHHHHHHHTTCCC
T ss_pred HCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCcc-HHHHHHHHhCCCC
Confidence 5677888888988876 567788889999999998877 5566667777775
No 459
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=27.12 E-value=1.2e+02 Score=23.56 Aligned_cols=67 Identities=16% Similarity=0.008 Sum_probs=39.5
Q ss_pred CCCchhHhhhcceEEEecCC-CcchHHHHHHHHHHHHhhcCccEEEEEeCCcch----HHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASD-KPQATDVLLRNHLVITHKRRIEYLVVVSDDSDF----VEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsd-KPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF----~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+.. .+...+. +..++... .|..+.++..|=++. ..+-+... ++ ++..||-
T Consensus 24 G~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~ 100 (276)
T 1mxh_A 24 GHSIAVRLHQQGFRVVVHYRHSEGAAQR-LVAELNAA--RAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVN 100 (276)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHHH--STTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCChHHHHH-HHHHHHHh--cCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 67788999999999987655 4544433 33333321 155667777776666 44444333 22 5665553
No 460
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=27.11 E-value=43 Score=25.79 Aligned_cols=27 Identities=15% Similarity=0.270 Sum_probs=20.8
Q ss_pred eCCc--chHHHHHHHHhcCCcEEEEccCC
Q 039912 80 SDDS--DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 80 SDds--dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
|||+ ...++++.|.++|+..++|-|-+
T Consensus 13 Sd~g~~~~~e~v~~A~~~Gl~~iaiTDH~ 41 (245)
T 1m65_A 13 STHAYSTLSDYIAQAKQKGIKLFAITDHG 41 (245)
T ss_dssp STTCCCCHHHHHHHHHHHTCCEEEEEEEC
T ss_pred CCCCCCcHHHHHHHHHHCCCCEEEECCCC
Confidence 5543 46788888888888888888864
No 461
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Probab=27.10 E-value=53 Score=32.08 Aligned_cols=71 Identities=13% Similarity=0.028 Sum_probs=47.0
Q ss_pred CccEEEEEeCCc-----chHHHHHHHH-hcCCcEEEEccCCCccccchhcccccH-----HHHhhchhhhhhhhhhcccc
Q 039912 72 RIEYLVVVSDDS-----DFVEVLLEAN-LRCLKTVVVGDINDGALKRISYACFSW-----WDILMGKARKEAVSVVGKWK 140 (198)
Q Consensus 72 gv~clvLVSDds-----dF~~~Lr~Ar-~r~l~TVVVGd~~~~~L~R~AD~~fsW-----~eV~~Gka~k~A~~~~g~W~ 140 (198)
.-+|||++.-+. .....++.|+ ++|.+-|||.=.- ......||.|++= ..+++|-+..-.. ..|-
T Consensus 222 ~ad~il~~G~N~~~~~p~~~~~i~~a~~~~GaklivIDPr~-t~ta~~AD~~l~irPGTD~AL~lam~~~ii~---~~l~ 297 (1015)
T 1kqf_A 222 NANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRF-TRTASVADIYAPIRSGTDITFLSGVLRYLIE---NNKI 297 (1015)
T ss_dssp GCSEEEEESCCHHHHSTTTTHHHHHHHHHSCCEEEEECSSC-CHHHHTCSEEECCCTTCHHHHHHHHHHHHHH---TTCS
T ss_pred hCCEEEEECCChhhhCchHHHHHHHHHHHCCCeEEEEeCCC-CchhHhhCeeeccCCCchHHHHHHHHHHHHH---cCCc
Confidence 468899987653 3344677888 8999999997653 5678899999863 3444444443322 2456
Q ss_pred ccccch
Q 039912 141 DGDVLK 146 (198)
Q Consensus 141 d~dvlk 146 (198)
|.++++
T Consensus 298 D~~fv~ 303 (1015)
T 1kqf_A 298 NAEYVK 303 (1015)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 666665
No 462
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=27.09 E-value=50 Score=25.86 Aligned_cols=72 Identities=18% Similarity=0.118 Sum_probs=43.1
Q ss_pred CCCchhHhhhcc-eEEEecCCCcchH-HHHHH--------------HHHHHHhhcCccEEEEEeCCc----------chH
Q 039912 33 GNGLIGELKRGG-LWVRTASDKPQAT-DVLLR--------------NHLVITHKRRIEYLVVVSDDS----------DFV 86 (198)
Q Consensus 33 gyGLa~ELrRAG-v~VrtVsdKPqAA-D~ALk--------------rhm~~m~~~gv~clvLVSDds----------dF~ 86 (198)
|..++.+|.+.| ..|+.+...|..+ ...|. ..+... -.|++.|+.+.... --.
T Consensus 18 G~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~ 96 (299)
T 2wm3_A 18 GGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELA-LNGAYATFIVTNYWESCSQEQEVKQGK 96 (299)
T ss_dssp HHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEECCCHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHH-HhcCCEEEEeCCCCccccchHHHHHHH
Confidence 555778888877 7887655544421 11121 112222 14799998876421 123
Q ss_pred HHHHHHHhcCCcEEEEccC
Q 039912 87 EVLLEANLRCLKTVVVGDI 105 (198)
Q Consensus 87 ~~Lr~Ar~r~l~TVVVGd~ 105 (198)
.+++.|++.+++.+|....
T Consensus 97 ~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 97 LLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEEEcC
Confidence 5778888999999988543
No 463
>1tmo_A TMAO reductase, trimethylamine N-oxide reductase; oxidoreductase, oxotransferase, molybdoenzyme, MO-cofactor, molybdenum; HET: 2MD; 2.50A {Shewanella massilia} SCOP: b.52.2.2 c.81.1.1
Probab=27.00 E-value=48 Score=31.10 Aligned_cols=47 Identities=9% Similarity=0.054 Sum_probs=35.8
Q ss_pred CccEEEEEeCCcc-------------hHHHHHHHHh---cCC-cEEEEccCCCccccchh-ccccc
Q 039912 72 RIEYLVVVSDDSD-------------FVEVLLEANL---RCL-KTVVVGDINDGALKRIS-YACFS 119 (198)
Q Consensus 72 gv~clvLVSDdsd-------------F~~~Lr~Ar~---r~l-~TVVVGd~~~~~L~R~A-D~~fs 119 (198)
.-+|||++--+.- +...|+.||+ +|. +-|||.=.- ....+.| |.|++
T Consensus 210 ~ad~il~~G~Np~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~klivIDPr~-t~ta~~a~d~~l~ 274 (829)
T 1tmo_A 210 HSDTIVLWSNDPYKNLQVGWNAETHESFAYLAQLKEKVKQGKIRVISIDPVV-TKTQAYLGCEQLY 274 (829)
T ss_dssp HCSEEEEESCCHHHHTSCCSSBCCCTHHHHHHHHHHHHHHTSSEEEEECSSC-CHHHHHHTCEEEC
T ss_pred hCCEEEEECCChhhccccccccccchHHHHHHHHHHHhhCCCceEEEECCCC-CCcchhhcCEEec
Confidence 5688999977652 3466888998 998 999997653 5678888 99983
No 464
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=27.00 E-value=63 Score=24.91 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=41.2
Q ss_pred CCCchhHhhhcceEEEecCCCcch----------HHHHHHHHHHHHhhcCccEEEEEeC---Ccch-----------HHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQA----------TDVLLRNHLVITHKRRIEYLVVVSD---DSDF-----------VEV 88 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqA----------AD~ALkrhm~~m~~~gv~clvLVSD---dsdF-----------~~~ 88 (198)
|..|+..|.+.|..|..+...|.. .|..=...+..+. .+++.||...- ..++ ..+
T Consensus 15 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l 93 (267)
T 3ay3_A 15 GSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLV-KDCDGIIHLGGVSVERPWNDILQANIIGAYNL 93 (267)
T ss_dssp HHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHH-TTCSEEEECCSCCSCCCHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHH-cCCCEEEECCcCCCCCCHHHHHHHHHHHHHHH
Confidence 456788888889888766554431 2211112222221 37898887632 2233 467
Q ss_pred HHHHHhcCCcEEE-Ecc
Q 039912 89 LLEANLRCLKTVV-VGD 104 (198)
Q Consensus 89 Lr~Ar~r~l~TVV-VGd 104 (198)
++.|++.+++.+| ++-
T Consensus 94 ~~a~~~~~~~~iv~~SS 110 (267)
T 3ay3_A 94 YEAARNLGKPRIVFASS 110 (267)
T ss_dssp HHHHHHTTCCEEEEEEE
T ss_pred HHHHHHhCCCEEEEeCC
Confidence 8888888886655 443
No 465
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=26.97 E-value=1.4e+02 Score=21.95 Aligned_cols=63 Identities=14% Similarity=0.112 Sum_probs=37.9
Q ss_pred hhHhhhcceEEE-ecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcc----hHHHHHHHHhcCC--cEEEEccC
Q 039912 37 IGELKRGGLWVR-TASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSD----FVEVLLEANLRCL--KTVVVGDI 105 (198)
Q Consensus 37 a~ELrRAGv~Vr-tVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsd----F~~~Lr~Ar~r~l--~TVVVGd~ 105 (198)
+..|+.+||-|. +=.+.|. +. +.+ .....+.+.++|-|=... +.++++.-|++++ -.|+||..
T Consensus 24 ~~~l~~~G~~Vi~lG~~~p~--e~-~v~---~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 24 DHAFTNAGFNVVNIGVLSPQ--EL-FIK---AAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHHHHTTCEEEEEEEEECH--HH-HHH---HHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHHHHCCCEEEECCCCCCH--HH-HHH---HHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 578999999998 3223332 12 222 222457888877765543 3345666677776 45778874
No 466
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=26.89 E-value=69 Score=27.26 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=42.5
Q ss_pred hhHhhhcc-eEEEecCCCcchHHHHHHHHHH-HHhhcCccEEEE--EeCCcc---hHHHHHHHHhcCCcEEE-EccCCCc
Q 039912 37 IGELKRGG-LWVRTASDKPQATDVLLRNHLV-ITHKRRIEYLVV--VSDDSD---FVEVLLEANLRCLKTVV-VGDINDG 108 (198)
Q Consensus 37 a~ELrRAG-v~VrtVsdKPqAAD~ALkrhm~-~m~~~gv~clvL--VSDdsd---F~~~Lr~Ar~r~l~TVV-VGd~~~~ 108 (198)
..+|++-| =.|-.|.|+ .....-+-..+. .+.+.|+++.++ |.-++. ...+++.+++.+...|| ||.++-.
T Consensus 23 ~~~l~~~g~~~~livtd~-~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~ 101 (386)
T 1rrm_A 23 TDEVKRRGYQKALIVTDK-TLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQ 101 (386)
T ss_dssp HHHHHHHTCCEEEEECBH-HHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHH
T ss_pred HHHHHHcCCCEEEEEECc-chhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHHH
Confidence 44556555 344456663 323221233333 666778887654 233444 45566777888888777 7876533
Q ss_pred cccchh
Q 039912 109 ALKRIS 114 (198)
Q Consensus 109 ~L~R~A 114 (198)
.+++.+
T Consensus 102 D~aK~i 107 (386)
T 1rrm_A 102 DTCKAI 107 (386)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 467
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=26.87 E-value=1.3e+02 Score=23.53 Aligned_cols=56 Identities=20% Similarity=0.052 Sum_probs=36.8
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHH
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEA 92 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~A 92 (198)
|..+|..|.+.|..|..+...+...+.+ ..++. ..|..+.++..|=++...+-+..
T Consensus 34 G~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~---~~~~~~~~~~~D~~~~~~~~~~~ 89 (273)
T 1ae1_A 34 GYAIVEELAGLGARVYTCSRNEKELDEC-LEIWR---EKGLNVEGSVCDLLSRTERDKLM 89 (273)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHH---HTTCCEEEEECCTTCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHH---hcCCceEEEECCCCCHHHHHHHH
Confidence 6678899999999998776655544332 22222 34667777878877766554444
No 468
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=26.79 E-value=50 Score=29.45 Aligned_cols=42 Identities=14% Similarity=0.260 Sum_probs=0.0
Q ss_pred chhHhhhcceEEEecCC----CcchHHHHHHHHHHHHhhcCccEEEEEeCC
Q 039912 36 LIGELKRGGLWVRTASD----KPQATDVLLRNHLVITHKRRIEYLVVVSDD 82 (198)
Q Consensus 36 La~ELrRAGv~VrtVsd----KPqAAD~ALkrhm~~m~~~gv~clvLVSDd 82 (198)
++.+||++|+.|.+-.. ... ++++|......|+..+|+|-++
T Consensus 373 ia~~LR~~Gi~ve~d~~~~~~~~s-----l~kq~~~A~~~g~~~~iiiG~~ 418 (467)
T 4e51_A 373 VAERLRDTGLDVILHCSADGAGAS-----FKSQMKRADASGAAFAVIFGED 418 (467)
T ss_dssp HHHHHHHTTCCEEECCCTTSSCCC-----HHHHHHHHHHTTCSEEEEECHH
T ss_pred HHHHHHHcCCeEEEEcccccccCC-----HHHHHHHHHHcCCCEEEEECcc
No 469
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=26.73 E-value=50 Score=28.32 Aligned_cols=36 Identities=19% Similarity=0.175 Sum_probs=22.4
Q ss_pred HhhcCccEEEEEeCCcchHHHHHHHHhcCCcEE-EEcc
Q 039912 68 THKRRIEYLVVVSDDSDFVEVLLEANLRCLKTV-VVGD 104 (198)
Q Consensus 68 m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TV-VVGd 104 (198)
+-+.|+.+.+-.++ ..+..-++.|.+.|+..+ +||+
T Consensus 321 Lr~~Gi~v~~d~~~-~~~~~k~~~A~~~g~p~~iiiG~ 357 (401)
T 1evl_A 321 LSNAGIRVKADLRN-EKIGFKIREHTLRRVPYMLVCGD 357 (401)
T ss_dssp HHHTTCCEEEECCS-SCHHHHHHHHHHTTCSEEEEECH
T ss_pred HHHCCCEEEEECCC-CCHHHHHHHHHhcCCCEEEEECc
Confidence 33557776554332 357777888888777754 4565
No 470
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=26.60 E-value=1.5e+02 Score=23.25 Aligned_cols=70 Identities=17% Similarity=0.014 Sum_probs=43.0
Q ss_pred CCCchhHhhhcceEEEecCCCcc---------hHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCc
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQ---------ATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLK 98 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPq---------AAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~ 98 (198)
|..+|..|.+.|..|-.+...+. .....+..-...+...|..+.++..|=++...+-+...+. .+.
T Consensus 28 G~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 107 (280)
T 3pgx_A 28 GRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLD 107 (280)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 66788999999999976532110 0111222222233356888888888888877766555442 677
Q ss_pred EEEE
Q 039912 99 TVVV 102 (198)
Q Consensus 99 TVVV 102 (198)
.+|-
T Consensus 108 ~lvn 111 (280)
T 3pgx_A 108 VVVA 111 (280)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 471
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=26.60 E-value=77 Score=22.74 Aligned_cols=22 Identities=27% Similarity=0.261 Sum_probs=17.5
Q ss_pred CCCchhHhhhcceEEEecCCCc
Q 039912 33 GNGLIGELKRGGLWVRTASDKP 54 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKP 54 (198)
|..++..|.+.|+.|..+...|
T Consensus 15 G~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 15 AINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp HHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHCCCCEEEEECCC
Confidence 4457889999999998887655
No 472
>1ti6_A Pyrogallol hydroxytransferase large subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.52.2.2 c.81.1.1 PDB: 1ti2_A* 1ti4_A* 1vld_M* 1vle_M* 1vlf_M*
Probab=26.60 E-value=53 Score=31.16 Aligned_cols=47 Identities=17% Similarity=0.140 Sum_probs=33.6
Q ss_pred cCccEEEEEeCCcchHH----------HHHH-HHhcCCcEEEEccCCCccccch-hccccc
Q 039912 71 RRIEYLVVVSDDSDFVE----------VLLE-ANLRCLKTVVVGDINDGALKRI-SYACFS 119 (198)
Q Consensus 71 ~gv~clvLVSDdsdF~~----------~Lr~-Ar~r~l~TVVVGd~~~~~L~R~-AD~~fs 119 (198)
..-+|||++.-+. -+. .++. ||++|.+.|||.=.- ...++. ||+|++
T Consensus 207 ~~ad~il~~G~Np-~~~p~~~~~~~~~~~~~~a~~~G~klivIDPr~-t~ta~~~Ad~~l~ 265 (875)
T 1ti6_A 207 KHAEMIVFWSSDP-ETNSGIYAGFESNIRRQWLKDLGVDFVFIDPHM-NHTARLVADKWFS 265 (875)
T ss_dssp HHCSEEEEESCCH-HHHCSSSCTTTTHHHHHHHHHTTCEEEEECSBC-CHHHHHHCSEEEC
T ss_pred hcCCEEEEECCCh-hhCCccCCCccchHHHHHHHHcCCeEEEECCCC-CCcccccCCEEec
Confidence 3578999998875 332 3443 999999999997653 456665 699865
No 473
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=26.56 E-value=1.2e+02 Score=23.71 Aligned_cols=66 Identities=11% Similarity=-0.076 Sum_probs=41.7
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|..+...+...+. +...+. ..|....++..|=++...+-+...+ + ++..||-
T Consensus 44 G~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~ 114 (272)
T 1yb1_A 44 GRLTAYEFAKLKSKLVLWDINKHGLEE-TAAKCK---GLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVN 114 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEcCHHHHHH-HHHHHH---hcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEE
Confidence 667888999999999876665554432 333333 3466677777887777665554443 1 5665553
No 474
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=26.49 E-value=49 Score=24.25 Aligned_cols=51 Identities=14% Similarity=0.139 Sum_probs=36.1
Q ss_pred ceEEEecCCCcchHHHHHHHHHHHHhh-cCccEEEEEeCCcchHHHHHHHHhcCCcEEEE
Q 039912 44 GLWVRTASDKPQATDVLLRNHLVITHK-RRIEYLVVVSDDSDFVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 44 Gv~VrtVsdKPqAAD~ALkrhm~~m~~-~gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVV 102 (198)
|--|-|..+.+++.-.| .+ .++.||||..+..--..+++.|++.|+--+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a--------~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t 104 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTA--------LEMPNVRCLILTGNLEPVQLVLTKAEERGVPVILT 104 (139)
T ss_dssp SEEEEEETTCHHHHHHH--------TTCTTEEEEEEETTCCCCHHHHHHHHHHTCCEEEC
T ss_pred CEEEEEcCCHHHHHHHH--------HhCCCCcEEEEcCCCCCCHHHHHHHHHCCCeEEEE
Confidence 44444547766544222 24 68999999999998999999999998854443
No 475
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=26.48 E-value=81 Score=24.70 Aligned_cols=55 Identities=18% Similarity=0.088 Sum_probs=37.3
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL 94 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~ 94 (198)
|..+|..|.+.|..|-.+...++....+.. .+ +..+.++..|=++...+-+.+.+
T Consensus 43 G~aia~~l~~~G~~Vi~~~r~~~~~~~~~~----~~---~~~~~~~~~Dl~~~~~v~~~~~~ 97 (281)
T 3ppi_A 43 GEATVRRLHADGLGVVIADLAAEKGKALAD----EL---GNRAEFVSTNVTSEDSVLAAIEA 97 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HH---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCChHHHHHHHH----Hh---CCceEEEEcCCCCHHHHHHHHHH
Confidence 677899999999999876655544432222 22 55677788888887776665554
No 476
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=26.35 E-value=49 Score=26.90 Aligned_cols=66 Identities=11% Similarity=0.017 Sum_probs=39.6
Q ss_pred CchhHhhhcceEEEe-cCCCcchHHHHHHHHHHHHhhcCccEEEEEe--CCcchHHHHHHHHhc-CCcEEE-Ecc
Q 039912 35 GLIGELKRGGLWVRT-ASDKPQATDVLLRNHLVITHKRRIEYLVVVS--DDSDFVEVLLEANLR-CLKTVV-VGD 104 (198)
Q Consensus 35 GLa~ELrRAGv~Vrt-VsdKPqAAD~ALkrhm~~m~~~gv~clvLVS--DdsdF~~~Lr~Ar~r-~l~TVV-VGd 104 (198)
|=|..|.++|+.... |-|-=+..+..+ .++. +.|++.+...+ |+.||.-.|+.|.++ +...|+ +|-
T Consensus 27 gGa~~l~~~g~~Pd~ivGDfDSi~~~~~-~~~~---~~~~~i~~~~~eKD~TD~e~Al~~a~~~~~~~~I~i~Ga 97 (218)
T 3ihk_A 27 KGSSFLLKNQLPLDLAIGDFDSVSAEEF-KQIK---AKAKKLVMAPAEKNDTDTELALKTIFDCFGRVEIIVFGA 97 (218)
T ss_dssp HHHHHHHHTTCCCSEEEECCTTSCHHHH-HHHH---TTCSSEEECCSSCSSCHHHHHHHHHHHHTSSCEEEEESC
T ss_pred HHHHHHHHcCCCCCEEEeCcccCCHHHH-HHHH---hcCCeEEECCCCCCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence 446667777764332 122222233333 3232 56777766677 889999999999998 565555 454
No 477
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=26.19 E-value=84 Score=24.82 Aligned_cols=65 Identities=12% Similarity=-0.053 Sum_probs=40.0
Q ss_pred CCCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 32 VGNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 32 vgyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
.|..+|..|.+.|..|-.+...+ ...+++. +...+-.+.++..|=++...+-+.+.+. .+..||-
T Consensus 40 IG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~----l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 109 (280)
T 3nrc_A 40 IAYGIAKAMHREGAELAFTYVGQ--FKDRVEK----LCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVH 109 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT--CHHHHHH----HHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeeCch--HHHHHHH----HHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35568899999999998765555 2222222 2122234677788888877776665542 5665553
No 478
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=26.14 E-value=1.9e+02 Score=24.05 Aligned_cols=57 Identities=26% Similarity=0.211 Sum_probs=35.0
Q ss_pred EEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCc-------chHHHHHHH-HhcCCcEEEEccCC
Q 039912 46 WVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDS-------DFVEVLLEA-NLRCLKTVVVGDIN 106 (198)
Q Consensus 46 ~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDds-------dF~~~Lr~A-r~r~l~TVVVGd~~ 106 (198)
-|-.|+=-|..++.+|+..+ ..|++-+++|+|+. .++.+|..+ ++.+..-|+.|..+
T Consensus 58 ~V~av~~G~~~~~~~lr~al----a~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s 122 (264)
T 1o97_C 58 EVVVVSVGPDRVDESLRKCL----AKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQS 122 (264)
T ss_dssp EEEEEEESCGGGHHHHHHHH----HTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCC
T ss_pred eEEEEEeCchhHHHHHHHHH----hcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 34333323443556776642 35999999999754 234455544 34578889999865
No 479
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=26.03 E-value=45 Score=24.63 Aligned_cols=51 Identities=22% Similarity=0.276 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHhh--c-----CccEEEEEeCCc------chHHHHHHHHhcCCcEEEEccCC
Q 039912 56 ATDVLLRNHLVITHK--R-----RIEYLVVVSDDS------DFVEVLLEANLRCLKTVVVGDIN 106 (198)
Q Consensus 56 AAD~ALkrhm~~m~~--~-----gv~clvLVSDds------dF~~~Lr~Ar~r~l~TVVVGd~~ 106 (198)
.-..||..-+..+.. . ....|||+||-. ....+++.+++.|++..+||=+.
T Consensus 83 ~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~ 146 (194)
T 1mf7_A 83 HTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGD 146 (194)
T ss_dssp CHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESG
T ss_pred hHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecc
Confidence 334567665543321 1 134699999742 24678899999998877777653
No 480
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=25.94 E-value=1.3e+02 Score=23.22 Aligned_cols=63 Identities=16% Similarity=0.064 Sum_probs=39.5
Q ss_pred CCCchhHhhhcceEEEecCCCc-chHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---h--cCCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKP-QATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---L--RCLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKP-qAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~--r~l~TVVV 102 (198)
|..+|..|.+.|..|..+...| ...+. .+. ..|....++..|=++...+-+... + -++..||-
T Consensus 20 G~~ia~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (249)
T 2ew8_A 20 GRAIAERFAVEGADIAIADLVPAPEAEA----AIR---NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVN 88 (249)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCCHHHHH----HHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhHHHH----HHH---hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998766555 43322 222 235566777778777666554433 2 25666553
No 481
>1jdp_A NPR-C, atrial natriuretic peptide clearance receptor; hormone-receptor complex, natriuretic peptide receptor, ALLO activation, signaling protein; HET: NDG NAG; 2.00A {Homo sapiens} SCOP: c.93.1.1 PDB: 1jdn_A* 1yk0_A* 1yk1_A*
Probab=25.90 E-value=42 Score=27.81 Aligned_cols=69 Identities=10% Similarity=0.092 Sum_probs=42.7
Q ss_pred ccCCCCCCCch---------hHhhhcceEEEecCCCc-chHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcC
Q 039912 27 VLTPEVGNGLI---------GELKRGGLWVRTASDKP-QATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRC 96 (198)
Q Consensus 27 lltPkvgyGLa---------~ELrRAGv~VrtVsdKP-qAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~ 96 (198)
++.....||-. .+|++.|+-|-...-.| ...| ....+..+. .+.+-|++.+...+...+++.|++.|
T Consensus 159 ii~~d~~~g~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~d--~~~~l~~i~-~~~~vii~~~~~~~~~~~~~~~~~~g 235 (441)
T 1jdp_A 159 LVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLD--LEDIVRNIQ-ASERVVIMCASSDTIRSIMLVAHRHG 235 (441)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHHHHHTCEEEEEEECTTSCCC--HHHHHHHHH-HHCSEEEEESCHHHHHHHHHHHHHTT
T ss_pred EEEEcCCcccchHHHHHHHHHHHHhcCcEEEEEEecCCcccC--HHHHHHHhh-cCCcEEEEecCHHHHHHHHHHHHHcC
Confidence 45555556643 55677897664322112 1222 233333443 56788888888888999999999998
Q ss_pred Cc
Q 039912 97 LK 98 (198)
Q Consensus 97 l~ 98 (198)
+.
T Consensus 236 l~ 237 (441)
T 1jdp_A 236 MT 237 (441)
T ss_dssp CT
T ss_pred CC
Confidence 74
No 482
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=25.90 E-value=1.8e+02 Score=22.16 Aligned_cols=22 Identities=14% Similarity=-0.082 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhcCccEEEEEeC
Q 039912 60 LLRNHLVITHKRRIEYLVVVSD 81 (198)
Q Consensus 60 ALkrhm~~m~~~gv~clvLVSD 81 (198)
.+++.+......|+..|++.+-
T Consensus 86 ~~~~~i~~a~~lG~~~v~~~~g 107 (272)
T 2q02_A 86 KTEGLLRDAQGVGARALVLCPL 107 (272)
T ss_dssp HHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCEEEEccC
Confidence 4555566555677777776553
No 483
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=25.83 E-value=50 Score=32.58 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCCcEEEEccC-CCccccchhcccccH
Q 039912 86 VEVLLEANLRCLKTVVVGDI-NDGALKRISYACFSW 120 (198)
Q Consensus 86 ~~~Lr~Ar~r~l~TVVVGd~-~~~~L~R~AD~~fsW 120 (198)
..+++.-+++|-.+..+||+ ||-.-=+.||+++.-
T Consensus 616 ~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm 651 (920)
T 1mhs_A 616 YNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV 651 (920)
T ss_dssp HHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc
Confidence 45667777788888899995 443334678988763
No 484
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=25.70 E-value=17 Score=28.03 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=22.0
Q ss_pred HHHHHHHHhcCC---cEEEEccC-CCccccchhcccccH
Q 039912 86 VEVLLEANLRCL---KTVVVGDI-NDGALKRISYACFSW 120 (198)
Q Consensus 86 ~~~Lr~Ar~r~l---~TVVVGd~-~~~~L~R~AD~~fsW 120 (198)
..+.+.++..|+ .+++|||+ ||-...+.|.+.+-|
T Consensus 200 ~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 4dw8_A 200 LSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM 238 (279)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence 445556666777 49999994 444555666654433
No 485
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=25.65 E-value=1.8e+02 Score=23.31 Aligned_cols=51 Identities=14% Similarity=0.142 Sum_probs=34.1
Q ss_pred ecCCCcchHHHHHHHHHHHHhhc--CccEEEEEeCCcchHHHHHHHHhcCCcEEEEcc
Q 039912 49 TASDKPQATDVLLRNHLVITHKR--RIEYLVVVSDDSDFVEVLLEANLRCLKTVVVGD 104 (198)
Q Consensus 49 tVsdKPqAAD~ALkrhm~~m~~~--gv~clvLVSDdsdF~~~Lr~Ar~r~l~TVVVGd 104 (198)
.++..|.-+-..| +++. +. +.+-+++||+..+ ..++..|++.|+.+.++--
T Consensus 9 l~sG~g~~~~~~l-~~l~---~~~l~~~I~~Vit~~~~-~~v~~~A~~~gIp~~~~~~ 61 (212)
T 3av3_A 9 FASGSGTNFQAIV-DAAK---RGDLPARVALLVCDRPG-AKVIERAARENVPAFVFSP 61 (212)
T ss_dssp ECCSSCHHHHHHH-HHHH---TTCCCEEEEEEEESSTT-CHHHHHHHHTTCCEEECCG
T ss_pred EEECCcHHHHHHH-HHHH---hCCCCCeEEEEEeCCCC-cHHHHHHHHcCCCEEEeCc
Confidence 4577777553333 3322 33 5666778888655 4789999999999988754
No 486
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=25.57 E-value=74 Score=24.78 Aligned_cols=63 Identities=10% Similarity=-0.134 Sum_probs=38.6
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHH---hc--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEAN---LR--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar---~r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+ .. ..|..+.++..|=++...+-+... ++ ++..||-
T Consensus 18 G~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 85 (254)
T 1hdc_A 18 GAEAARQAVAAGARVVLADVLDEEGAAT-AR------ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN 85 (254)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HH------TTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH------HhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6678899999999998766555443322 22 124456677777776665544443 32 5766663
No 487
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=25.50 E-value=2.1e+02 Score=22.17 Aligned_cols=65 Identities=15% Similarity=-0.021 Sum_probs=39.7
Q ss_pred hhHhhhcceEEEecC--------------CCcc---hHHHHHHHHHHHHhhcCccEEEEEeCCc--------------ch
Q 039912 37 IGELKRGGLWVRTAS--------------DKPQ---ATDVLLRNHLVITHKRRIEYLVVVSDDS--------------DF 85 (198)
Q Consensus 37 a~ELrRAGv~VrtVs--------------dKPq---AAD~ALkrhm~~m~~~gv~clvLVSDds--------------dF 85 (198)
...|++.|+.+-.+. ..|. ++-..+++.+......|+..|++.+... .|
T Consensus 54 ~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~l 133 (269)
T 3ngf_A 54 ARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSGITEGLDRKACEETFIENF 133 (269)
T ss_dssp HHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHHHH
Confidence 456777888876432 1122 3334577777777788999998866411 13
Q ss_pred HHHHHHHHhcCCcEEEE
Q 039912 86 VEVLLEANLRCLKTVVV 102 (198)
Q Consensus 86 ~~~Lr~Ar~r~l~TVVV 102 (198)
..+...|++.|++ +.+
T Consensus 134 ~~l~~~a~~~Gv~-l~l 149 (269)
T 3ngf_A 134 RYAADKLAPHGIT-VLV 149 (269)
T ss_dssp HHHHHHHGGGTCE-EEE
T ss_pred HHHHHHHHHcCCE-EEE
Confidence 3455667778874 444
No 488
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=25.46 E-value=1.4e+02 Score=23.65 Aligned_cols=65 Identities=17% Similarity=0.110 Sum_probs=41.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVV 101 (198)
|..+|..|.+.|..|..+...|...+. +...+. ..|....++..|=++...+-+...+ + ++..||
T Consensus 35 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 104 (277)
T 2rhc_B 35 GLEIARRLGKEGLRVFVCARGEEGLRT-TLKELR---EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLV 104 (277)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 667889999999999876655544433 333332 3466677777787776665544433 2 566655
No 489
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=25.31 E-value=1.6e+02 Score=22.66 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=40.8
Q ss_pred CCCchhHhhhcceEEEecCCCcch--HHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHh---c--CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQA--TDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANL---R--CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqA--AD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~---r--~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...+.. .+. +...+. ..|..+.++..|=++...+-+...+ + ++..||-
T Consensus 15 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 87 (258)
T 3a28_C 15 GRGISEKLAADGFDIAVADLPQQEEQAAE-TIKLIE---AADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVN 87 (258)
T ss_dssp HHHHHHHHHHHTCEEEEEECGGGHHHHHH-HHHHHH---TTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCcchHHHHH-HHHHHH---hcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 667888999999999876555543 322 223222 3466777787887777665544433 2 5665553
No 490
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=25.26 E-value=75 Score=24.60 Aligned_cols=70 Identities=16% Similarity=0.067 Sum_probs=41.6
Q ss_pred CCCchhHhhhcceEEEecCCCcc---hHHHHHHH-------HHHHHhhcCccEEEEEeCCcch-----------------
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQ---ATDVLLRN-------HLVITHKRRIEYLVVVSDDSDF----------------- 85 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPq---AAD~ALkr-------hm~~m~~~gv~clvLVSDdsdF----------------- 85 (198)
|.-|+.+|.+.|+.|..+...+. .....+.. +....+=.+++.||-.......
T Consensus 20 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~ 99 (321)
T 3vps_A 20 GGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSG 99 (321)
T ss_dssp HHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCCCCHHHHTTSTTTTHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCccCChHHHHhCHHHHHHHHHHH
Confidence 56788999999999987655443 00001100 0112222378888765543321
Q ss_pred HHHHHHHHhcCCcEEEE
Q 039912 86 VEVLLEANLRCLKTVVV 102 (198)
Q Consensus 86 ~~~Lr~Ar~r~l~TVVV 102 (198)
..+++.|++.+++.+|.
T Consensus 100 ~~ll~a~~~~~v~~~v~ 116 (321)
T 3vps_A 100 RHLLALCTSVGVPKVVV 116 (321)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCeEEE
Confidence 45899999999877665
No 491
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=25.23 E-value=1.9e+02 Score=20.66 Aligned_cols=73 Identities=10% Similarity=0.026 Sum_probs=39.0
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc---EEEEEeCCcch-----HHHHHHHHhcCC---cEEEEcc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE---YLVVVSDDSDF-----VEVLLEANLRCL---KTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~---clvLVSDdsdF-----~~~Lr~Ar~r~l---~TVVVGd 104 (198)
+-..|+ .|+.+-.+|..|... +...+.. .|+. ..++.|++... ..+...+++.|+ .+++|||
T Consensus 115 ~l~~l~-~g~~~~i~sn~~~~~---~~~~l~~---~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 187 (240)
T 3qnm_A 115 VLEYLA-PQYNLYILSNGFREL---QSRKMRS---AGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGD 187 (240)
T ss_dssp HHHHHT-TTSEEEEEECSCHHH---HHHHHHH---HTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHH-cCCeEEEEeCCchHH---HHHHHHH---cChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECC
Confidence 445677 898888888876532 1221221 2332 23455554332 334445555666 6899999
Q ss_pred C--CCccccchhc
Q 039912 105 I--NDGALKRISY 115 (198)
Q Consensus 105 ~--~~~~L~R~AD 115 (198)
+ +|-...+.|-
T Consensus 188 ~~~~Di~~a~~aG 200 (240)
T 3qnm_A 188 SWEADITGAHGVG 200 (240)
T ss_dssp CTTTTHHHHHHTT
T ss_pred CchHhHHHHHHcC
Confidence 7 4433334333
No 492
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=25.23 E-value=84 Score=22.05 Aligned_cols=39 Identities=26% Similarity=0.241 Sum_probs=25.8
Q ss_pred HhhcCccEE-EEEeCCcchHHHHHHHH--hcCCcEEEEccCC
Q 039912 68 THKRRIEYL-VVVSDDSDFVEVLLEAN--LRCLKTVVVGDIN 106 (198)
Q Consensus 68 m~~~gv~cl-vLVSDdsdF~~~Lr~Ar--~r~l~TVVVGd~~ 106 (198)
+.++||+.- +=|+.|.+....++... .+.|-+|+|||+.
T Consensus 24 L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~Dg~ 65 (92)
T 2lqo_A 24 LTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFADGS 65 (92)
T ss_dssp HHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETTSC
T ss_pred HHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeCCE
Confidence 346788874 44666666665554432 4678899999974
No 493
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=25.22 E-value=1.2e+02 Score=23.53 Aligned_cols=62 Identities=19% Similarity=0.056 Sum_probs=38.0
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVV 101 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVV 101 (198)
|..+|..|.+.|..|..+...+...+. +.. .+ |..+.++..|=++...+-+...+. .+..||
T Consensus 19 G~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~---~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 85 (253)
T 1hxh_A 19 GLEVVKLLLGEGAKVAFSDINEAAGQQ-LAA---EL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLV 85 (253)
T ss_dssp HHHHHHHHHHTTCEEEEECSCHHHHHH-HHH---HH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH---Hc---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 667889999999999876655544332 222 22 445666777777766654444332 455555
No 494
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=25.17 E-value=1.2e+02 Score=22.01 Aligned_cols=63 Identities=19% Similarity=0.160 Sum_probs=33.2
Q ss_pred chhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcCcc---EEEEEeCCcchH-----HHHHHHHhcCC---cEEEEcc
Q 039912 36 LIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRRIE---YLVVVSDDSDFV-----EVLLEANLRCL---KTVVVGD 104 (198)
Q Consensus 36 La~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~gv~---clvLVSDdsdF~-----~~Lr~Ar~r~l---~TVVVGd 104 (198)
+-.+|+..|+.+-.++..|. +...|+ ..|+. ..++.|++.... .+.+.+++.|+ .+|+|||
T Consensus 100 ~l~~l~~~g~~~~i~t~~~~-~~~~l~-------~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGD 171 (233)
T 3nas_A 100 LLCQLKNENIKIGLASSSRN-APKILR-------RLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIED 171 (233)
T ss_dssp HHHHHHHTTCEEEECCSCTT-HHHHHH-------HTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEEC
T ss_pred HHHHHHHCCCcEEEEcCchh-HHHHHH-------HcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeC
Confidence 45678889999999998876 322222 22332 123334443222 23444445565 4788888
Q ss_pred CC
Q 039912 105 IN 106 (198)
Q Consensus 105 ~~ 106 (198)
+.
T Consensus 172 s~ 173 (233)
T 3nas_A 172 AE 173 (233)
T ss_dssp SH
T ss_pred CH
Confidence 63
No 495
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=24.99 E-value=60 Score=26.51 Aligned_cols=64 Identities=16% Similarity=-0.010 Sum_probs=38.8
Q ss_pred CchhHhhhcceEEEe-cCCCcchHHHHHHHHHHHHhhcCccEEEEEe--CCcchHHHHHHHHhcCCcEEEE
Q 039912 35 GLIGELKRGGLWVRT-ASDKPQATDVLLRNHLVITHKRRIEYLVVVS--DDSDFVEVLLEANLRCLKTVVV 102 (198)
Q Consensus 35 GLa~ELrRAGv~Vrt-VsdKPqAAD~ALkrhm~~m~~~gv~clvLVS--DdsdF~~~Lr~Ar~r~l~TVVV 102 (198)
|=|..|.++|+.... |-|-=+..+..+ .++. +.|+..+..-+ |+.||.-.|+.|.+++...|+|
T Consensus 33 gGa~~l~~~g~~Pd~ivGDfDSi~~~~~-~~~~---~~~~~i~~~p~eKD~TD~e~Al~~a~~~g~~~I~i 99 (222)
T 3lm8_A 33 KGTVTLLDAGIIPVEAFGDFDSITEQER-RRIE---KAAPALHVYQAEKDQTDLDLALDWALEKQPDIIQI 99 (222)
T ss_dssp HHHHHHHHHTCCCSEEESCSTTSCHHHH-HHHH---HHCTTCEEECCCSSSCHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHcCCCCcEEEeCcccCCHHHH-HHHH---hcCCeEEEeCCCCCCCHHHHHHHHHHHcCCCEEEE
Confidence 335556666654432 222222333333 3333 45777766654 6999999999999998887765
No 496
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=24.88 E-value=80 Score=22.29 Aligned_cols=37 Identities=8% Similarity=-0.034 Sum_probs=28.2
Q ss_pred cCccEEEEEeCCcc-----hHHHHHHHHhcCCcEEEEccCCC
Q 039912 71 RRIEYLVVVSDDSD-----FVEVLLEANLRCLKTVVVGDIND 107 (198)
Q Consensus 71 ~gv~clvLVSDdsd-----F~~~Lr~Ar~r~l~TVVVGd~~~ 107 (198)
.+++.+++|.|-++ +..+++..++.++..++||.-.|
T Consensus 103 ~~~~~vi~v~d~~~~~~~~~~~~~~~~~~~~~p~i~v~nK~D 144 (195)
T 3pqc_A 103 WSLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIPFTIVLTKMD 144 (195)
T ss_dssp TTEEEEEEEEETTSCCCHHHHHHHHHHHHTTCCEEEEEECGG
T ss_pred cCceEEEEEecCCCCCCHHHHHHHHHHHHcCCCEEEEEEChh
Confidence 46688888888443 45677788888999999998654
No 497
>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}
Probab=24.86 E-value=56 Score=29.47 Aligned_cols=61 Identities=5% Similarity=-0.025 Sum_probs=40.8
Q ss_pred hHhhhcceEEEec---CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhcCCc
Q 039912 38 GELKRGGLWVRTA---SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLRCLK 98 (198)
Q Consensus 38 ~ELrRAGv~VrtV---sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r~l~ 98 (198)
.++.+.|+-|-.+ +..|.+-+.-....+..+.+.+.+-|++.+...+...+++.|++.|+.
T Consensus 142 ~~~~~~g~~v~~~~~~~~~~~~~~~d~~~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~ 205 (823)
T 3kg2_A 142 DSAAEKKWQVTAINVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKH 205 (823)
T ss_dssp HHHHHTTCEEEEEECSSCCSSSTTTTTTTHHHHTTTTTCCEEEEECCHHHHHHHHHHHHHHTTT
T ss_pred HHhhccCCceEEEEeecCCCCccchhHHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCcC
Confidence 4566778776532 222221122233444455567889999999999999999999999974
No 498
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=24.75 E-value=80 Score=25.67 Aligned_cols=50 Identities=14% Similarity=0.142 Sum_probs=40.5
Q ss_pred CccEEEEEeCCcch----HHHHHHHHhcCCcEEEEccCCCccccchhcccccHHH
Q 039912 72 RIEYLVVVSDDSDF----VEVLLEANLRCLKTVVVGDINDGALKRISYACFSWWD 122 (198)
Q Consensus 72 gv~clvLVSDdsdF----~~~Lr~Ar~r~l~TVVVGd~~~~~L~R~AD~~fsW~e 122 (198)
+-+..+|+|-|+-| ..+++.+++.++...||=..+ ....=.|-+.+||..
T Consensus 87 ~~~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiS-s~~aa~a~~G~pl~~ 140 (268)
T 1vhv_A 87 SKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGAS-ISTAVCGLTGLHNYR 140 (268)
T ss_dssp TSEEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCC-HHHHHHHHHCCCGGG
T ss_pred CCCEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCcc-HHHHHHHHcCCCccc
Confidence 34677888999887 566788888999999998887 567777889999987
No 499
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=24.65 E-value=1.7e+02 Score=24.12 Aligned_cols=67 Identities=10% Similarity=0.046 Sum_probs=40.4
Q ss_pred CCCchhHhhhcceEEEec----CCCcchHHHHHHHHHHHHhhcCccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTA----SDKPQATDVLLRNHLVITHKRRIEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtV----sdKPqAAD~ALkrhm~~m~~~gv~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|... .+..+..-..|...+. ..|..+.++..|=++...+-+...+. ++..||-
T Consensus 18 G~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~---~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVn 93 (324)
T 3u9l_A 18 GRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFAR---DNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIH 93 (324)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHH---HHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHH---hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 667889999999999742 2222222233444333 34677778877877766655554432 6766553
No 500
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=24.53 E-value=1.4e+02 Score=24.23 Aligned_cols=66 Identities=23% Similarity=0.175 Sum_probs=43.2
Q ss_pred CCCchhHhhhcceEEEecCCCcchHHHHHHHHHHHHhhcC-ccEEEEEeCCcchHHHHHHHHhc-----CCcEEEE
Q 039912 33 GNGLIGELKRGGLWVRTASDKPQATDVLLRNHLVITHKRR-IEYLVVVSDDSDFVEVLLEANLR-----CLKTVVV 102 (198)
Q Consensus 33 gyGLa~ELrRAGv~VrtVsdKPqAAD~ALkrhm~~m~~~g-v~clvLVSDdsdF~~~Lr~Ar~r-----~l~TVVV 102 (198)
|..+|..|.+.|..|-.+...++..+.+. ..+ ...+ -.+.++..|=++...+-+...+. .+..||-
T Consensus 54 G~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 125 (293)
T 3rih_A 54 GRGIATVFARAGANVAVAARSPRELSSVT-AEL---GELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCA 125 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGGHHHH-HHH---TTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHH---HhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 66789999999999988766666554333 222 2334 56777888888877665554432 5665553
Done!